Query 010821
Match_columns 500
No_of_seqs 625 out of 4212
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:58:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 8.8E-39 3E-43 320.8 32.0 310 151-500 11-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 2.6E-33 9E-38 282.2 34.1 305 154-499 6-314 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 2.5E-33 8.7E-38 281.9 28.2 299 158-499 23-322 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 2.7E-30 9.4E-35 252.9 24.5 269 171-498 4-279 (280)
5 3ddj_A CBS domain-containing p 100.0 2.4E-29 8.4E-34 248.8 21.8 262 170-499 20-284 (296)
6 2yzq_A Putative uncharacterize 99.9 2.5E-27 8.7E-32 232.3 17.2 243 180-499 9-278 (282)
7 1z0n_A 5'-AMP-activated protei 99.9 1E-24 3.4E-29 177.7 10.9 88 21-112 6-93 (96)
8 2qlv_B Protein SIP2, protein S 99.9 3.7E-24 1.3E-28 203.8 11.2 90 24-113 2-91 (252)
9 3kh5_A Protein MJ1225; AMPK, A 99.9 1.1E-22 3.6E-27 198.9 20.4 195 274-499 9-204 (280)
10 3ddj_A CBS domain-containing p 99.9 4.2E-22 1.4E-26 196.8 13.3 190 273-499 24-213 (296)
11 3nme_A Ptpkis1 protein, SEX4 g 99.9 7.9E-22 2.7E-26 194.1 10.4 86 23-109 167-254 (294)
12 2v8q_E 5'-AMP-activated protei 99.9 4.4E-21 1.5E-25 192.5 15.2 205 274-499 40-250 (330)
13 3t4n_C Nuclear protein SNF4; C 99.8 1E-20 3.5E-25 189.2 17.1 202 276-499 39-247 (323)
14 2yzq_A Putative uncharacterize 99.8 5.5E-20 1.9E-24 179.9 12.5 173 274-495 6-179 (282)
15 2qrd_G Protein C1556.08C; AMPK 99.8 1.8E-19 6.1E-24 181.0 15.8 204 277-499 32-242 (334)
16 4esy_A CBS domain containing m 99.8 1.1E-19 3.6E-24 164.8 8.5 125 360-499 19-161 (170)
17 3i8n_A Uncharacterized protein 99.8 6.4E-18 2.2E-22 145.8 12.4 120 360-500 7-129 (130)
18 3lv9_A Putative transporter; C 99.7 8.9E-18 3E-22 148.2 12.9 119 360-500 24-145 (148)
19 3k6e_A CBS domain protein; str 99.7 5.6E-18 1.9E-22 151.3 10.8 121 363-499 19-141 (156)
20 3nqr_A Magnesium and cobalt ef 99.7 3.2E-18 1.1E-22 147.1 8.6 120 360-500 4-126 (127)
21 3lhh_A CBS domain protein; str 99.7 3E-17 1E-21 148.9 14.4 119 360-500 43-164 (172)
22 3kpb_A Uncharacterized protein 99.7 1.3E-17 4.4E-22 141.8 11.2 117 361-499 3-119 (122)
23 3hf7_A Uncharacterized CBS-dom 99.7 1.1E-17 3.8E-22 144.5 10.6 121 361-500 4-127 (130)
24 3jtf_A Magnesium and cobalt ef 99.7 6.1E-18 2.1E-22 145.8 8.1 118 360-500 6-126 (129)
25 1pbj_A Hypothetical protein; s 99.7 5.7E-17 2E-21 138.3 12.9 119 361-499 3-121 (125)
26 2rih_A Conserved protein with 99.7 5.2E-17 1.8E-21 142.0 11.7 120 359-498 5-126 (141)
27 3k2v_A Putative D-arabinose 5- 99.7 5.6E-17 1.9E-21 143.3 12.1 118 360-496 29-148 (149)
28 2uv4_A 5'-AMP-activated protei 99.7 7.4E-17 2.5E-21 143.0 12.8 135 345-499 16-150 (152)
29 3oco_A Hemolysin-like protein 99.7 3.4E-17 1.2E-21 145.4 9.8 118 361-500 22-143 (153)
30 3fv6_A YQZB protein; CBS domai 99.7 1.3E-16 4.5E-21 142.6 13.5 121 360-499 18-143 (159)
31 3lfr_A Putative metal ION tran 99.7 1.6E-17 5.3E-22 144.7 7.2 121 360-500 4-127 (136)
32 2o16_A Acetoin utilization pro 99.7 1.7E-16 5.9E-21 142.0 13.9 125 360-499 6-134 (160)
33 4gqw_A CBS domain-containing p 99.7 6.1E-17 2.1E-21 142.8 10.8 126 360-499 6-142 (152)
34 2p9m_A Hypothetical protein MJ 99.7 1.9E-16 6.6E-21 137.5 13.7 121 360-499 9-135 (138)
35 3gby_A Uncharacterized protein 99.7 3E-17 1E-21 141.1 8.4 120 360-499 6-125 (128)
36 2nyc_A Nuclear protein SNF4; b 99.7 2.1E-16 7.3E-21 138.1 14.0 125 364-499 16-140 (144)
37 1y5h_A Hypothetical protein RV 99.7 4.4E-17 1.5E-21 140.8 9.2 121 360-499 9-130 (133)
38 2yzi_A Hypothetical protein PH 99.7 2.4E-16 8.3E-21 137.0 13.8 120 360-499 8-128 (138)
39 2ef7_A Hypothetical protein ST 99.7 1.8E-16 6.1E-21 136.9 12.8 120 360-499 5-124 (133)
40 3ctu_A CBS domain protein; str 99.7 7.9E-17 2.7E-21 143.3 10.5 123 361-499 17-141 (156)
41 3ocm_A Putative membrane prote 99.7 2E-16 6.9E-21 143.7 13.4 118 360-500 37-157 (173)
42 2pfi_A Chloride channel protei 99.7 3E-16 1E-20 140.4 13.5 130 360-499 14-146 (164)
43 3fhm_A Uncharacterized protein 99.7 1.5E-16 5.1E-21 143.1 11.2 122 360-499 25-149 (165)
44 1o50_A CBS domain-containing p 99.7 4.6E-16 1.6E-20 138.6 14.0 124 360-499 17-152 (157)
45 3lqn_A CBS domain protein; csg 99.7 2.5E-16 8.5E-21 139.1 10.8 124 360-499 16-142 (150)
46 3sl7_A CBS domain-containing p 99.7 2.3E-16 7.8E-21 143.4 10.6 126 360-499 5-155 (180)
47 2rc3_A CBS domain; in SITU pro 99.7 3.4E-16 1.2E-20 135.6 11.1 119 361-499 8-130 (135)
48 3kxr_A Magnesium transporter, 99.7 8.6E-16 3E-20 143.4 13.9 162 223-418 11-175 (205)
49 2emq_A Hypothetical conserved 99.7 7.5E-16 2.6E-20 136.9 12.8 124 360-499 12-138 (157)
50 1pvm_A Conserved hypothetical 99.7 6.6E-16 2.2E-20 141.5 12.5 122 360-498 10-131 (184)
51 3l2b_A Probable manganase-depe 99.6 1.5E-15 5E-20 145.7 15.3 198 273-498 11-242 (245)
52 4fry_A Putative signal-transdu 99.6 5.1E-16 1.8E-20 138.2 11.1 121 360-499 8-134 (157)
53 1yav_A Hypothetical protein BS 99.6 5.4E-16 1.8E-20 138.4 11.0 124 360-499 15-141 (159)
54 3kxr_A Magnesium transporter, 99.6 1E-15 3.6E-20 142.9 12.4 116 360-499 55-173 (205)
55 3oi8_A Uncharacterized protein 99.6 4.3E-16 1.5E-20 138.9 8.7 114 360-495 39-155 (156)
56 2d4z_A Chloride channel protei 99.6 4.7E-15 1.6E-19 142.3 16.5 139 360-500 14-246 (250)
57 1vr9_A CBS domain protein/ACT 99.6 3E-15 1E-19 140.6 14.4 156 272-480 16-172 (213)
58 3lhh_A CBS domain protein; str 99.6 4E-15 1.4E-19 134.8 14.2 120 271-418 44-165 (172)
59 1vr9_A CBS domain protein/ACT 99.6 1.1E-15 3.6E-20 143.7 10.6 120 356-499 10-129 (213)
60 3lv9_A Putative transporter; C 99.6 6.9E-15 2.4E-19 129.5 14.4 118 272-417 26-145 (148)
61 2j9l_A Chloride channel protei 99.6 2E-15 6.7E-20 138.0 11.2 125 360-499 12-164 (185)
62 3k6e_A CBS domain protein; str 99.6 4.7E-15 1.6E-19 132.3 11.6 119 276-417 24-142 (156)
63 4esy_A CBS domain containing m 99.6 2.5E-15 8.5E-20 135.8 9.7 134 273-415 22-160 (170)
64 3kpb_A Uncharacterized protein 99.6 1.3E-14 4.3E-19 123.1 12.5 115 274-417 6-120 (122)
65 3i8n_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 124.7 12.1 116 273-415 10-127 (130)
66 2ef7_A Hypothetical protein ST 99.6 2.4E-14 8.3E-19 123.4 13.5 118 273-417 8-125 (133)
67 3gby_A Uncharacterized protein 99.6 9.2E-15 3.2E-19 125.4 10.1 118 273-417 9-126 (128)
68 3hf7_A Uncharacterized CBS-dom 99.6 1.7E-14 5.7E-19 124.4 11.3 116 277-417 12-127 (130)
69 3oi8_A Uncharacterized protein 99.6 2.9E-14 9.8E-19 127.0 13.0 115 270-412 39-155 (156)
70 3lfr_A Putative metal ION tran 99.6 1.2E-14 4E-19 126.3 10.0 113 277-415 13-125 (136)
71 3jtf_A Magnesium and cobalt ef 99.6 1.8E-14 6.2E-19 123.9 11.0 111 277-416 15-125 (129)
72 1pbj_A Hypothetical protein; s 99.6 2.6E-14 9E-19 121.6 11.8 117 274-417 6-122 (125)
73 3ocm_A Putative membrane prote 99.5 8.1E-14 2.8E-18 126.4 15.3 121 269-418 36-158 (173)
74 2oux_A Magnesium transporter; 99.5 9E-15 3.1E-19 143.7 9.6 116 360-499 138-258 (286)
75 3oco_A Hemolysin-like protein 99.5 2.3E-14 7.9E-19 127.0 11.3 117 274-418 25-144 (153)
76 3nqr_A Magnesium and cobalt ef 99.5 1.7E-14 5.9E-19 123.6 10.0 111 278-415 14-124 (127)
77 2yvy_A MGTE, Mg2+ transporter 99.5 1.9E-14 6.4E-19 140.8 11.1 116 360-499 136-256 (278)
78 4aee_A Alpha amylase, catalyti 99.5 5.7E-15 1.9E-19 162.4 8.3 81 22-105 14-102 (696)
79 2rih_A Conserved protein with 99.5 6.8E-14 2.3E-18 122.0 13.4 117 273-414 9-125 (141)
80 3lqn_A CBS domain protein; csg 99.5 9.5E-14 3.2E-18 122.3 14.1 120 277-418 25-144 (150)
81 2p9m_A Hypothetical protein MJ 99.5 5.6E-14 1.9E-18 121.8 12.4 119 273-417 12-136 (138)
82 2o16_A Acetoin utilization pro 99.5 6.9E-14 2.4E-18 124.9 13.3 126 273-417 9-135 (160)
83 2yzi_A Hypothetical protein PH 99.5 1.3E-13 4.4E-18 119.6 13.3 121 272-418 10-130 (138)
84 3fhm_A Uncharacterized protein 99.5 1.8E-13 6.1E-18 122.8 14.1 116 277-417 35-150 (165)
85 3fv6_A YQZB protein; CBS domai 99.5 1E-13 3.5E-18 123.6 12.4 119 273-417 21-144 (159)
86 2rc3_A CBS domain; in SITU pro 99.5 1.2E-13 4.2E-18 119.3 12.4 115 277-417 17-131 (135)
87 2oux_A Magnesium transporter; 99.5 1.2E-13 4E-18 135.7 13.4 169 219-418 78-260 (286)
88 2nyc_A Nuclear protein SNF4; b 99.5 1.6E-13 5.4E-18 119.7 12.8 119 274-416 16-140 (144)
89 4gqw_A CBS domain-containing p 99.5 8.3E-14 2.9E-18 122.5 11.0 132 274-417 10-143 (152)
90 1o50_A CBS domain-containing p 99.5 2.6E-13 8.9E-18 120.7 14.0 133 273-417 20-153 (157)
91 3k2v_A Putative D-arabinose 5- 99.5 1.2E-13 4.1E-18 121.7 11.5 115 273-413 32-148 (149)
92 2uv4_A 5'-AMP-activated protei 99.5 2.5E-13 8.7E-18 120.0 13.5 115 277-415 29-149 (152)
93 2yvy_A MGTE, Mg2+ transporter 99.5 1.9E-13 6.6E-18 133.6 13.8 134 253-417 119-257 (278)
94 2emq_A Hypothetical conserved 99.5 3.6E-13 1.2E-17 119.4 13.6 124 273-418 15-140 (157)
95 3ctu_A CBS domain protein; str 99.5 1.4E-13 4.6E-18 122.2 10.4 122 274-418 20-143 (156)
96 1pvm_A Conserved hypothetical 99.5 3.4E-13 1.2E-17 123.3 13.4 119 273-415 13-131 (184)
97 3pc3_A CG1753, isoform A; CBS, 99.5 1.3E-13 4.5E-18 146.8 12.0 121 360-499 385-510 (527)
98 2pfi_A Chloride channel protei 99.5 3.1E-13 1E-17 120.7 12.3 123 274-417 18-147 (164)
99 4fry_A Putative signal-transdu 99.5 3.8E-13 1.3E-17 119.5 12.7 116 277-418 21-136 (157)
100 1y5h_A Hypothetical protein RV 99.5 6.4E-14 2.2E-18 120.7 7.1 116 274-415 13-129 (133)
101 2d4z_A Chloride channel protei 99.4 8.4E-13 2.9E-17 126.5 14.6 141 272-417 16-246 (250)
102 3sl7_A CBS domain-containing p 99.4 3.4E-13 1.1E-17 122.3 11.2 137 275-417 10-156 (180)
103 2zy9_A Mg2+ transporter MGTE; 99.4 7.1E-13 2.4E-17 139.0 15.3 163 224-417 110-277 (473)
104 1yav_A Hypothetical protein BS 99.4 3.7E-13 1.3E-17 119.9 10.5 121 275-417 20-142 (159)
105 2j9l_A Chloride channel protei 99.4 1.5E-12 5E-17 118.7 14.0 134 279-417 25-165 (185)
106 3l2b_A Probable manganase-depe 99.4 2.3E-12 7.9E-17 123.3 15.8 210 170-415 7-242 (245)
107 2zy9_A Mg2+ transporter MGTE; 99.4 4.1E-13 1.4E-17 140.8 11.4 116 360-499 156-276 (473)
108 3usb_A Inosine-5'-monophosphat 99.4 2E-12 6.9E-17 136.4 13.4 114 362-498 116-232 (511)
109 3org_A CMCLC; transporter, tra 99.4 1.1E-13 3.9E-18 150.2 3.2 137 360-498 454-623 (632)
110 1zfj_A Inosine monophosphate d 99.3 7.1E-12 2.4E-16 132.3 12.3 115 362-499 93-210 (491)
111 3pc3_A CG1753, isoform A; CBS, 99.3 1E-11 3.6E-16 132.1 11.6 121 272-418 387-512 (527)
112 4fxs_A Inosine-5'-monophosphat 99.3 1.7E-12 5.7E-17 136.6 5.1 114 362-498 92-207 (496)
113 3usb_A Inosine-5'-monophosphat 99.3 5.8E-11 2E-15 125.3 16.6 155 274-479 118-276 (511)
114 1vrd_A Inosine-5'-monophosphat 99.3 6E-13 2E-17 140.6 0.4 115 362-499 98-214 (494)
115 1me8_A Inosine-5'-monophosphat 99.3 5.7E-13 1.9E-17 140.7 0.2 113 365-499 103-220 (503)
116 4avf_A Inosine-5'-monophosphat 99.2 6.7E-13 2.3E-17 139.4 0.1 113 362-498 91-205 (490)
117 4af0_A Inosine-5'-monophosphat 99.2 2.9E-12 9.8E-17 132.0 0.1 109 365-497 144-255 (556)
118 1me8_A Inosine-5'-monophosphat 99.1 4.5E-12 1.5E-16 133.8 -0.7 154 275-477 103-260 (503)
119 1zfj_A Inosine monophosphate d 99.1 8.9E-10 3.1E-14 116.2 15.8 116 274-417 95-211 (491)
120 3org_A CMCLC; transporter, tra 99.1 6.3E-11 2.2E-15 128.6 7.1 134 274-414 458-622 (632)
121 4af0_A Inosine-5'-monophosphat 99.1 1.5E-11 5.1E-16 126.7 1.8 162 210-415 92-256 (556)
122 4aef_A Neopullulanase (alpha-a 99.1 2.3E-10 7.8E-15 124.8 10.6 79 25-106 16-99 (645)
123 1jcn_A Inosine monophosphate d 99.1 1.8E-12 6E-17 137.6 -6.9 117 361-498 110-231 (514)
124 2cu0_A Inosine-5'-monophosphat 99.0 3.1E-11 1.1E-15 127.0 0.3 109 364-498 98-206 (486)
125 4fxs_A Inosine-5'-monophosphat 99.0 1.2E-10 4.2E-15 122.3 4.8 112 274-415 94-207 (496)
126 4avf_A Inosine-5'-monophosphat 99.0 1.8E-10 6.2E-15 120.9 4.9 112 274-416 93-206 (490)
127 1vrd_A Inosine-5'-monophosphat 98.9 1.5E-10 5.1E-15 122.2 2.0 114 274-417 100-215 (494)
128 2cu0_A Inosine-5'-monophosphat 98.8 5.5E-10 1.9E-14 117.5 -0.2 110 274-416 98-207 (486)
129 3ghd_A A cystathionine beta-sy 98.8 1.1E-08 3.9E-13 77.6 6.8 62 369-434 2-63 (70)
130 1jcn_A Inosine monophosphate d 98.8 2.9E-10 1E-14 120.5 -3.7 115 274-415 113-231 (514)
131 3ghd_A A cystathionine beta-sy 98.7 6.2E-08 2.1E-12 73.5 7.5 47 451-499 2-48 (70)
132 3fio_A A cystathionine beta-sy 98.5 2.6E-07 8.9E-12 69.5 6.8 62 369-434 2-63 (70)
133 3fio_A A cystathionine beta-sy 98.4 6.2E-07 2.1E-11 67.4 7.5 48 450-499 1-48 (70)
134 2z0b_A GDE5, KIAA1434, putativ 98.4 7.8E-07 2.7E-11 76.0 7.7 57 25-81 8-75 (131)
135 1ac0_A Glucoamylase; hydrolase 97.9 6.3E-06 2.1E-10 68.0 4.0 57 25-81 6-73 (108)
136 3c8d_A Enterochelin esterase; 97.7 9.6E-05 3.3E-09 75.5 9.9 87 25-113 30-155 (403)
137 1m7x_A 1,4-alpha-glucan branch 97.5 0.00025 8.5E-09 76.6 9.6 67 27-95 26-100 (617)
138 3k1d_A 1,4-alpha-glucan-branch 97.4 0.00022 7.4E-09 77.9 7.7 66 27-94 137-210 (722)
139 3aml_A OS06G0726400 protein; s 97.4 0.00022 7.6E-09 78.4 7.6 63 27-92 66-142 (755)
140 2laa_A Beta/alpha-amylase; SBD 96.3 0.011 3.6E-07 47.7 7.4 64 27-92 6-76 (104)
141 3vgf_A Malto-oligosyltrehalose 96.1 0.0035 1.2E-07 66.7 4.5 61 27-93 10-73 (558)
142 1bf2_A Isoamylase; hydrolase, 96.0 0.0046 1.6E-07 68.1 4.7 55 28-85 18-85 (750)
143 1wzl_A Alpha-amylase II; pullu 95.8 0.0093 3.2E-07 63.8 6.3 60 23-82 20-87 (585)
144 2wsk_A Glycogen debranching en 95.8 0.01 3.5E-07 64.4 6.3 54 27-84 20-77 (657)
145 2bhu_A Maltooligosyltrehalose 95.6 0.01 3.4E-07 63.8 5.3 62 27-95 35-97 (602)
146 2vr5_A Glycogen operon protein 95.6 0.026 8.8E-07 61.8 8.5 55 27-85 30-91 (718)
147 1qho_A Alpha-amylase; glycosid 95.4 0.038 1.3E-06 60.2 9.2 68 23-92 579-669 (686)
148 1j0h_A Neopullulanase; beta-al 95.2 0.012 4.2E-07 62.9 4.5 61 22-82 19-89 (588)
149 2vn4_A Glucoamylase; hydrolase 95.1 0.12 4.1E-06 55.2 11.6 58 24-81 495-563 (599)
150 2e8y_A AMYX protein, pullulana 94.7 0.033 1.1E-06 61.0 6.2 64 27-93 114-184 (718)
151 2fhf_A Pullulanase; multiple d 94.5 0.04 1.4E-06 62.7 6.3 66 28-95 306-385 (1083)
152 1cyg_A Cyclodextrin glucanotra 94.4 0.093 3.2E-06 57.0 8.8 59 23-81 577-647 (680)
153 3bmv_A Cyclomaltodextrin gluca 93.9 0.096 3.3E-06 57.0 7.7 58 24-81 582-651 (683)
154 4aio_A Limit dextrinase; hydro 93.5 0.051 1.7E-06 60.9 4.8 53 28-83 138-194 (884)
155 3faw_A Reticulocyte binding pr 93.5 0.039 1.3E-06 61.5 3.7 65 28-94 146-224 (877)
156 1ea9_C Cyclomaltodextrinase; h 93.4 0.024 8.1E-07 60.6 1.8 59 23-81 20-85 (583)
157 1vem_A Beta-amylase; beta-alph 93.4 0.12 4.1E-06 54.1 7.0 58 23-81 417-485 (516)
158 1d3c_A Cyclodextrin glycosyltr 93.1 0.17 5.7E-06 55.1 7.9 58 24-81 585-654 (686)
159 2wan_A Pullulanase; hydrolase, 92.8 0.11 3.7E-06 58.5 6.0 62 28-93 327-398 (921)
160 2ya0_A Putative alkaline amylo 92.8 0.13 4.5E-06 56.2 6.5 65 28-94 26-106 (714)
161 3m07_A Putative alpha amylase; 91.6 0.22 7.6E-06 53.3 6.4 62 28-96 44-108 (618)
162 1ji1_A Alpha-amylase I; beta/a 91.2 0.17 5.8E-06 54.5 5.1 56 27-83 31-96 (637)
163 2ya1_A Putative alkaline amylo 90.0 0.25 8.4E-06 56.1 5.1 63 28-92 333-411 (1014)
164 2wan_A Pullulanase; hydrolase, 88.3 0.71 2.4E-05 51.8 7.3 60 25-86 152-221 (921)
165 4fch_A Outer membrane protein 87.6 0.47 1.6E-05 43.7 4.4 50 36-86 12-63 (221)
166 2c3v_A Alpha-amylase G-6; carb 86.8 1.2 4.1E-05 35.5 5.7 63 27-91 11-80 (102)
167 1gcy_A Glucan 1,4-alpha-maltot 86.7 0.13 4.4E-06 54.1 0.0 57 24-81 429-495 (527)
168 2eef_A Protein phosphatase 1, 63.8 8.4 0.00029 33.1 4.8 66 36-109 60-139 (156)
169 4fe9_A Outer membrane protein 63.6 7.2 0.00025 39.9 5.3 46 36-82 150-197 (470)
170 2djm_A Glucoamylase A; beta sa 61.7 20 0.00069 28.5 6.4 49 36-84 33-91 (106)
171 2jnz_A PHL P 3 allergen; timot 54.0 26 0.0009 28.0 5.8 61 22-88 24-90 (108)
172 1tif_A IF3-N, translation init 49.2 27 0.00094 26.1 4.9 29 390-418 13-41 (78)
173 4fem_A Outer membrane protein 48.7 14 0.00048 36.2 4.3 50 36-86 149-200 (358)
174 4dny_A Metalloprotease STCE; m 48.2 18 0.00061 29.7 4.0 24 67-91 99-123 (126)
175 4fe9_A Outer membrane protein 45.2 20 0.00069 36.5 5.0 54 36-90 260-320 (470)
176 1mhx_A Immunoglobulin-binding 40.2 11 0.00039 25.8 1.4 13 81-93 48-60 (65)
177 4aef_A Neopullulanase (alpha-a 34.4 35 0.0012 36.3 4.9 52 24-81 123-178 (645)
178 1igd_A Protein G; immunoglobul 33.0 18 0.00061 25.1 1.5 13 81-93 44-56 (61)
179 3fil_A Immunoglobulin G-bindin 32.8 12 0.00041 25.3 0.5 13 81-93 39-51 (56)
180 4fch_A Outer membrane protein 31.0 18 0.00063 32.7 1.7 49 37-85 117-169 (221)
181 1svj_A Potassium-transporting 30.2 21 0.00073 30.5 1.9 35 460-496 121-155 (156)
182 1tif_A IF3-N, translation init 27.5 82 0.0028 23.5 4.4 26 471-497 12-37 (78)
183 4gln_D D-RFX001; heterochiral 27.1 25 0.00085 23.8 1.3 16 78-93 35-51 (56)
184 2rpv_A Immunoglobulin G-bindin 25.6 28 0.00094 24.9 1.4 13 81-93 58-70 (75)
185 1ew4_A CYAY protein; friedreic 24.5 43 0.0015 26.6 2.6 20 71-91 65-84 (106)
186 3ft1_A PHL P 3 allergen; beta- 24.3 2E+02 0.0069 22.4 6.4 60 23-88 14-79 (100)
187 4a02_A EFCBM33A, CBM33, chitin 24.2 3.2E+02 0.011 23.4 8.3 71 27-107 75-163 (166)
188 2bem_A CBP21; chitin-binding p 23.7 2.2E+02 0.0074 24.6 7.2 72 27-108 76-167 (170)
189 1pgx_A Protein G; immunoglobul 21.5 30 0.001 25.3 0.9 13 81-93 52-64 (83)
190 4aee_A Alpha amylase, catalyti 21.1 68 0.0023 34.4 4.2 56 24-82 132-187 (696)
191 2fqm_A Phosphoprotein, P prote 20.9 49 0.0017 23.8 2.0 27 43-73 1-27 (75)
192 1pfs_A PF3 SSDBP, PF3 single-s 20.4 1E+02 0.0036 22.4 3.6 29 64-92 42-75 (78)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=8.8e-39 Score=320.76 Aligned_cols=310 Identities=25% Similarity=0.437 Sum_probs=248.8
Q ss_pred cchHHHHHHHHHHHHHHhhccccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHH
Q 010821 151 ISEADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDF 230 (500)
Q Consensus 151 ~~~~~~~~~~~~i~~~l~~~~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Di 230 (500)
..+.+.....+++.+||+.++|||+||.+.++++++.+.|+++|++.|.++ +++++||||.+.++++|++|..||
T Consensus 11 ~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~-----~~~~~pV~d~~~~~lvGilt~~Dl 85 (323)
T 3t4n_C 11 KVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQN-----SIVSAPLWDSKTSRFAGLLTTTDF 85 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHT-----TCSCEEEEETTTTEEEEEECHHHH
T ss_pred cccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHc-----CCceEEEEeCCCCeEEEEEEHHHH
Confidence 445666678899999999999999999999999999999999999999999 999999999887899999999999
Q ss_pred HHHHHHhcCCCCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCC
Q 010821 231 ILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS 310 (500)
Q Consensus 231 i~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~ 310 (500)
+.++.++...+.. .+.++.+....+++..... ..+.++++++.+++++.+|++.|.+++++++||++.+.
T Consensus 86 ~~~l~~~~~~~~~--~~~l~~~~~~~v~~i~~~~--------~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~ 155 (323)
T 3t4n_C 86 INVIQYYFSNPDK--FELVDKLQLDGLKDIERAL--------GVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDE 155 (323)
T ss_dssp HHHHHHHHHCGGG--GGGGGGCBHHHHHHHHHHT--------TC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECT
T ss_pred HHHHHHHHcCcch--hHHHHHHHHHHHHHHHHHh--------CCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCC
Confidence 9988766543321 2456666666777665432 24678899999999999999999999999999996432
Q ss_pred CCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCC
Q 010821 311 QDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQV 390 (500)
Q Consensus 311 ~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~ 390 (500)
..+ .++++|++|.+||++++..+... ......++.++.++ |.++++++.+++++.+|+++|.++++
T Consensus 156 ~~~-~~~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~ 221 (323)
T 3t4n_C 156 ETH-REIVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRV 221 (323)
T ss_dssp TTC-CEEEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTC
T ss_pred CCC-ccceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCC
Confidence 222 12399999999999998765433 12233444444221 66789999999999999999999999
Q ss_pred CEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcC
Q 010821 391 SSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANP 470 (500)
Q Consensus 391 ~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~ 470 (500)
+++||+|++|+++|+||.+|+++.+..+.+.. ...++.++|..... ...++++|.+++++.+|+++|.++
T Consensus 222 ~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~---~~~~v~~~m~~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~ 291 (323)
T 3t4n_C 222 SSVPIIDENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRSD-------DFEGVYTCTKNDKLSTIMDNIRKA 291 (323)
T ss_dssp SEEEEECTTCBEEEEEETTHHHHHHHTTHHHH---TTSBHHHHGGGSCT-------TCCCCEEECTTCBHHHHHHHHHHS
T ss_pred CEEEEECCCCeEEEEEeHHHHHHHHhhchhhh---ccCCHHHHHhhccc-------cCCCCEEECCCCCHHHHHHHHHHh
Confidence 99999999999999999999998776543322 24688887743110 012789999999999999999999
Q ss_pred CCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 471 GVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 471 ~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+++++||||+ +|+++|+||.+||++++++
T Consensus 292 ~~~~l~Vvd~-~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 292 RVHRFFVVDD-VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCCEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcEEEEEEHHHHHHHHHh
Confidence 9999999995 7999999999999999863
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=2.6e-33 Score=282.19 Aligned_cols=305 Identities=22% Similarity=0.436 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHH
Q 010821 154 ADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILI 233 (500)
Q Consensus 154 ~~~~~~~~~i~~~l~~~~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~i 233 (500)
.+.....+.+.+||...+++|+|+.+.++++++.+.|+.+|++.|.++ +++++||||.+.++++|+++..|++.+
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~-----~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLN-----NIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHH-----TCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHc-----CCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 445667889999999999999999999999999999999999999999 999999999877899999999999988
Q ss_pred HHHhcCCCCCC-ChhhhcccchhHHHHHHHhhccccCCCCcccCCCc--eecCCCCcHHHHHHHHHhcCCceeeEEecCC
Q 010821 234 LRELGNHGSNL-TEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPL--VYAGPNDNLKDVARKILHNEVATVPIIHSSS 310 (500)
Q Consensus 234 l~~~~~~~~~l-~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~--v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~ 310 (500)
+.......... ..+.+...++..+++....+ |.+++ +++.+++++.+|++.|.+++++++||++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~i----------m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-- 148 (334)
T 2qrd_G 81 IKYYYQSSSFPEAIAEIDKFRLLGLREVERKI----------GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV-- 148 (334)
T ss_dssp HHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHH----------TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE--
T ss_pred HHHHhhccCCccHHHHHhhhchhhHHHHHHhh----------ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC--
Confidence 76543210000 11244456677777665432 44555 99999999999999999999999999953
Q ss_pred CCC-CCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCC
Q 010821 311 QDG-SFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQ 389 (500)
Q Consensus 311 ~~~-~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~ 389 (500)
..+ ....++|++|.+||++++...... ......+++++ ..+|.++++++.+++++.+|++.|.+++
T Consensus 149 ~~~~~~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~ 215 (334)
T 2qrd_G 149 DGETGSEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKN 215 (334)
T ss_dssp ETTTTEEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHT
T ss_pred CCCcCccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcC
Confidence 222 011399999999999988754221 11122333332 1137788999999999999999999999
Q ss_pred CCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhc
Q 010821 390 VSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLAN 469 (500)
Q Consensus 390 ~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~ 469 (500)
++++||+|++|+++|+||.+|+++....+.+. ....++.++|..... + .+++++|++++++.+|+++|.+
T Consensus 216 ~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~---~~~~~v~~~m~~~~~-----~--~~~~~~v~~~~~l~~~~~~m~~ 285 (334)
T 2qrd_G 216 ISAVPIVNSEGTLLNVYESVDVMHLIQDGDYS---NLDLSVGEALLKRPA-----N--FDGVHTCRATDRLDGIFDAIKH 285 (334)
T ss_dssp CSEEEEECTTCBEEEEEETHHHHHHHTTSCGG---GGGSBHHHHHTTCCT-----T--CCCCCEECTTCBHHHHHHHHHH
T ss_pred CcEEEEEcCCCcEEEEEEHHHHHHHhhccccc---cccCcHHHHHhcccc-----c--CCCCEEECCCCcHHHHHHHHHH
Confidence 99999999889999999999999876654322 124678887732100 0 0478999999999999999999
Q ss_pred CCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 470 PGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 470 ~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
++++++||||+ +|+++|+||++||++++.
T Consensus 286 ~~~~~l~Vvd~-~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 286 SRVHRLFVVDE-NLKLEGILSLADILNYII 314 (334)
T ss_dssp SCCCEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred cCCCEEEEECC-CCeEEEEEeHHHHHHHHH
Confidence 99999999995 799999999999999875
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=2.5e-33 Score=281.93 Aligned_cols=299 Identities=32% Similarity=0.567 Sum_probs=239.8
Q ss_pred HHHHHHHHHHhhccccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHHHHHh
Q 010821 158 VSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILILREL 237 (500)
Q Consensus 158 ~~~~~i~~~l~~~~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~ 237 (500)
..++.++.||+..+++|+|+.+.++++++.+.|+.+|++.|.++ +++.+||+|.+.++++|+++..|++.++...
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~-----~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~ 97 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTN-----GVRAAPLWDSKKQSFVGMLTITDFINILHRY 97 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHH-----TCSEEEEEETTTTEEEEEEEHHHHHHHHHHH
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHc-----CCcEEEEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999 9999999998768999999999999877653
Q ss_pred cCCCCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCce
Q 010821 238 GNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQ 317 (500)
Q Consensus 238 ~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~ 317 (500)
...+. .....++...+..|.+... .+|.++++++.+++++.+|+++|.+++++++||++ ++++ +
T Consensus 98 ~~~~~-~~~~~l~~~~~~~~~~~~~----------~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~---~ 161 (330)
T 2v8q_E 98 YKSAL-VQIYELEEHKIETWREVYL----------QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID--PESG---N 161 (330)
T ss_dssp HHHHT-TTCCCGGGCBHHHHHHHHS----------SSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTC---C
T ss_pred Hhccc-cchhHHhhccHHHHHHHHh----------hcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCC---c
Confidence 21111 1112344555666654332 34788899999999999999999999999999993 3246 7
Q ss_pred EEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCC-CCceEecCCCCHHHHHHHHHHCCCCEEEEE
Q 010821 318 LLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALNLLVQAQVSSIPIV 396 (500)
Q Consensus 318 liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~-~~~~~v~~~~~l~ea~~~m~~~~~~~lpVv 396 (500)
++|++|.+||++++........ ....+..++.++.+ |. ++++++.+++++.+|++.|.+++++++||+
T Consensus 162 ~~Givt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 230 (330)
T 2v8q_E 162 TLYILTHKRILKFLKLFITEFP-KPEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVV 230 (330)
T ss_dssp EEEEECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEEcHHHHHHHHHHHhhccC-chhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEE
Confidence 9999999999998876533211 01223344444432 32 578899999999999999999999999999
Q ss_pred cCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEE
Q 010821 397 DDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLV 476 (500)
Q Consensus 397 d~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~ 476 (500)
|++|+++|+||.+|+++......+.. ...++.+++..+. .|.+++++|.+++++.+|+++|.+++++++|
T Consensus 231 d~~~~l~Giit~~dl~~~~~~~~~~~---~~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~ 300 (330)
T 2v8q_E 231 DEKGRVVDIYSKFDVINLAAEKTYNN---LDVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLV 300 (330)
T ss_dssp CTTSBEEEEEEGGGTGGGGGSSCCCC---CSSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEE
T ss_pred CCCCcEEEEEEHHHHHHHHhcccccc---ccCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEE
Confidence 98999999999999998655432221 2478888874322 3567899999999999999999999999999
Q ss_pred EEeCCCCeEEEEEehHHHHHHhh
Q 010821 477 IVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 477 VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
|+|+ +|+++|+||.+||++++.
T Consensus 301 Vvd~-~g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 301 VVDE-HDVVKGIVSLSDILQALV 322 (330)
T ss_dssp EECT-TSBEEEEEEHHHHHHHHH
T ss_pred EEcC-CCcEEEEEeHHHHHHHHH
Confidence 9995 799999999999999875
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.97 E-value=2.7e-30 Score=252.91 Aligned_cols=269 Identities=14% Similarity=0.307 Sum_probs=206.7
Q ss_pred cccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHHHHHhcCCCCCCChhhhc
Q 010821 171 TAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELE 250 (500)
Q Consensus 171 ~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~ 250 (500)
++.+.+... ++++++.+.|+.+|++.|.++ ++.++||+|.+.++++|++|..|++.++..... ...++
T Consensus 4 ~v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~-----~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~ 71 (280)
T 3kh5_A 4 RVMKIAQNK-KIVTVYPTTTIRKALMTMNEN-----KYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIR 71 (280)
T ss_dssp BGGGTSCCS-CCCCBCTTSBHHHHHHHHHHH-----CCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHH
T ss_pred hHHHHhcCC-CcEEECCCCcHHHHHHHHHhC-----CCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhh
Confidence 344555443 799999999999999999999 999999999767899999999999976532110 01111
Q ss_pred ccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHH
Q 010821 251 THTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKC 330 (500)
Q Consensus 251 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~ 330 (500)
.......... . ....+.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+|++++
T Consensus 72 ~~~~~~~~~~---~---~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~ 139 (280)
T 3kh5_A 72 EKHERNFLAA---I---NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVN---DEN---QLISLITERDVIRA 139 (280)
T ss_dssp TTSTTCHHHH---T---TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHHHH
T ss_pred hccccchhHH---h---hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEc---CCC---EEEEEEEHHHHHHH
Confidence 1111111000 0 1122345778899999999999999999999999999993 345 79999999999988
Q ss_pred HHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHH
Q 010821 331 VCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSD 410 (500)
Q Consensus 331 l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~D 410 (500)
+...... ..+ ++++|.+++.++.+++++.++++.|.+++++.+||+ ++|+++|+||.+|
T Consensus 140 ~~~~~~~--------~~~------------v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~d 198 (280)
T 3kh5_A 140 LLDKIDE--------NEV------------IDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTD 198 (280)
T ss_dssp HGGGSCT--------TCB------------SGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHH
T ss_pred HhhcCCC--------CCC------------HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHH
Confidence 7643211 112 344588889999999999999999999999999999 6899999999999
Q ss_pred HHHHHHcccc-ccc------CcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCC
Q 010821 411 ITALAKDKAY-AHI------NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSK 483 (500)
Q Consensus 411 i~~~~~~~~~-~~~------~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g 483 (500)
+++....+.. ..+ .....++.+ +|.+++++|++++++.+|+++|.+++++++||+|+ +|
T Consensus 199 l~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g 264 (280)
T 3kh5_A 199 FIKLLGSDWAFNHMQTGNVREITNVRMEE-------------IMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDE-NL 264 (280)
T ss_dssp HHHHHTSHHHHHHHHSCCTHHHHHCBHHH-------------HSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-TC
T ss_pred HHHHHhhhhhhhhhcccchhhhhCCcHHH-------------HhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECC-CC
Confidence 9987643211 000 012345555 45778999999999999999999999999999995 68
Q ss_pred eEEEEEehHHHHHHh
Q 010821 484 RVEGIVSLSDIFKFL 498 (500)
Q Consensus 484 ~liGiIS~~DIl~~l 498 (500)
+++|+||++||++++
T Consensus 265 ~~~Givt~~dil~~l 279 (280)
T 3kh5_A 265 RIKGIITEKDVLKYF 279 (280)
T ss_dssp BEEEEEEHHHHGGGG
T ss_pred eEEEEEeHHHHHHhh
Confidence 999999999999876
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=2.4e-29 Score=248.81 Aligned_cols=262 Identities=11% Similarity=0.144 Sum_probs=205.4
Q ss_pred ccccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHHHHHhcCCCCCCChhhh
Q 010821 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEEL 249 (500)
Q Consensus 170 ~~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l 249 (500)
.++.|++. .++++++.+.|+.+|++.|.++ ++..+||+| ++++|++|..|++..+......
T Consensus 20 ~~V~dim~--~~~~~v~~~~~v~~a~~~m~~~-----~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~--------- 80 (296)
T 3ddj_A 20 MNIETLMI--KNPPILSKEDRLGSAFKKINEG-----GIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD--------- 80 (296)
T ss_dssp SSGGGTCE--ESCCEECTTSBHHHHHHHTTGG-----GCCEEEEES---SSEEEEEEHHHHHGGGTTCC-----------
T ss_pred cCHHHhcc--CCCcEECCCccHHHHHHHHHHC-----CCceEEEEC---CeEEEEEeHHHHHHHhcccccc---------
Confidence 34556664 3799999999999999999999 999999998 7999999999999765321100
Q ss_pred cccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHH
Q 010821 250 ETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 329 (500)
Q Consensus 250 ~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~ 329 (500)
......+.... ....+.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|..|+++
T Consensus 81 -~~~~~~~~~~~------~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd---~~~---~lvGivt~~dl~~ 147 (296)
T 3ddj_A 81 -SCSQGDLYHIS------TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVD---IND---KPVGIVTEREFLL 147 (296)
T ss_dssp --CCHHHHHHHH------TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHGG
T ss_pred -cccchhhHHHh------cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHH
Confidence 00111111111 1123345778899999999999999999999999999993 345 7999999999987
Q ss_pred HHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHH
Q 010821 330 CVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRS 409 (500)
Q Consensus 330 ~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~ 409 (500)
++.... ...++ +++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+
T Consensus 148 ~~~~~~---------~~~~v------------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~ 206 (296)
T 3ddj_A 148 LYKDLD---------EIFPV------------KVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVV 206 (296)
T ss_dssp GGGGSC---------CCCBH------------HHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred hhhccc---------ccccH------------HHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHH
Confidence 553211 11233 344888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccc---CcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEE
Q 010821 410 DITALAKDKAYAHI---NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVE 486 (500)
Q Consensus 410 Di~~~~~~~~~~~~---~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~li 486 (500)
|++....... ..+ .....++.++ |.+++++|.+++++.+|+++|.+++++++||+|+ +|+++
T Consensus 207 dl~~~~~~~~-~~~~~~~~~~~~v~~~-------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~~~ 271 (296)
T 3ddj_A 207 NAIKQLAKAV-DKLDPDYFYGKVVKDV-------------MVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK-DNTIR 271 (296)
T ss_dssp HHHHHHHHHH-HHTCTHHHHTCBHHHH-------------SBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEE
T ss_pred HHHHHHHHHH-hhcChhhhcCcCHHHH-------------hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEE
Confidence 9998665321 110 0123566664 4778999999999999999999999999999995 79999
Q ss_pred EEEehHHHHHHhh
Q 010821 487 GIVSLSDIFKFLL 499 (500)
Q Consensus 487 GiIS~~DIl~~l~ 499 (500)
|+||++||++++.
T Consensus 272 Giit~~Dil~~l~ 284 (296)
T 3ddj_A 272 GIITERDLLIALH 284 (296)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEcHHHHHHHHH
Confidence 9999999999875
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.95 E-value=2.5e-27 Score=232.29 Aligned_cols=243 Identities=18% Similarity=0.323 Sum_probs=177.3
Q ss_pred cceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHHHHHhcCCCCCCChhhhcccchhHHHH
Q 010821 180 GKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKE 259 (500)
Q Consensus 180 ~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~ 259 (500)
.++++++.+.|+.+|++.|.++ ++..+||+|. .++++|+++..|++..+.. .+
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~-----~~~~~pV~d~-~~~~~Giv~~~dl~~~~~~---------------~~------ 61 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKY-----KVRSFPVVNK-EGKLVGIISVKRILVNPDE---------------EQ------ 61 (282)
T ss_dssp ESCCCEESSCC-----------------CCEEEEECT-TCCEEEEEESSCC-----------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHc-----CCCeEEEEcC-CCcEEEEEEHHHHHhhhcc---------------CC------
Confidence 4688899999999999999999 9999999986 4799999999997743210 00
Q ss_pred HHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHH-HHHhhcccC
Q 010821 260 GKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHC 338 (500)
Q Consensus 260 ~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~-~l~~~~~~~ 338 (500)
...++.++++++.+++++.+|++.|.+++++++||++ +++ +++|++|..|+++ ++... .
T Consensus 62 -----------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~di~~~~~~~~--~- 121 (282)
T 2yzq_A 62 -----------LAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVD---SKG---KPVGILTVGDIIRRYFAKS--E- 121 (282)
T ss_dssp -------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHTTTTC--S-
T ss_pred -----------HHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---EEEEEEEHHHHHHHHHhcc--C-
Confidence 0123566788999999999999999999999999993 335 7999999999997 55421 0
Q ss_pred CCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH------
Q 010821 339 SSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT------ 412 (500)
Q Consensus 339 ~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~------ 412 (500)
..... +++++|.++++++.+++++.++++.|.+++++.+||+|++|+++|++|.+|++
T Consensus 122 ----~~~~~------------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~ 185 (282)
T 2yzq_A 122 ----KYKGV------------EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIV 185 (282)
T ss_dssp ----GGGGC------------BSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGC
T ss_pred ----CcccC------------cHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhh
Confidence 00111 34566888899999999999999999999999999999889999999999998
Q ss_pred HHHHc------c--------ccc------ccCcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCC
Q 010821 413 ALAKD------K--------AYA------HINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGV 472 (500)
Q Consensus 413 ~~~~~------~--------~~~------~~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~ 472 (500)
+.... . ... .......++ .++|.+++++|++++++.+|+++|.++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------------~~im~~~~~~v~~~~~l~~a~~~m~~~~~ 252 (282)
T 2yzq_A 186 RIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPV-------------AEIMTRDVIVATPHMTVHEVALKMAKYSI 252 (282)
T ss_dssp C--------------------------------CCCBG-------------GGTCBSSCCCBCTTSBHHHHHHHHHHHTC
T ss_pred hhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCH-------------HHhcCCCCceeCCCCCHHHHHHHHHHcCc
Confidence 32210 0 000 000011222 24778899999999999999999999999
Q ss_pred CEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 473 RRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 473 ~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+++||+|+ +|+++|+||++||++++.
T Consensus 253 ~~lpVvd~-~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 253 EQLPVIRG-EGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp SEEEEEET-TTEEEEEEEHHHHGGGGC
T ss_pred ceeEEECC-CCCEEEEEeHHHHHHHHH
Confidence 99999995 689999999999998874
No 7
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.91 E-value=1e-24 Score=177.67 Aligned_cols=88 Identities=43% Similarity=0.871 Sum_probs=78.9
Q ss_pred CCCceeeEEEEecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCCCCeeeCCCCC
Q 010821 21 PDTVLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGI 100 (500)
Q Consensus 21 ~~~~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~~~~~g~ 100 (500)
+++..+|++|+|.++|++|+|+|+||+|+ ..+|.+. .|.|+++++|++|.|+|||+|||+|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 45677999999999999999999999999 6789873 4899999999999999999999999999999999999999
Q ss_pred eeeEEEeccCCC
Q 010821 101 VNTVLLATEPNF 112 (500)
Q Consensus 101 ~nn~l~v~~~~~ 112 (500)
.||+|.|.+.+.
T Consensus 82 ~Nnvi~V~~~d~ 93 (96)
T 1z0n_A 82 VNNIIQVKKTDF 93 (96)
T ss_dssp EEEEEEECSCTT
T ss_pred EeEEEEEcCCCc
Confidence 999999987764
No 8
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.90 E-value=3.7e-24 Score=203.77 Aligned_cols=90 Identities=24% Similarity=0.610 Sum_probs=81.6
Q ss_pred ceeeEEEEecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCCCCeeeCCCCCeee
Q 010821 24 VLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGIVNT 103 (500)
Q Consensus 24 ~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~~~~~g~~nn 103 (500)
.++|++|+|+++|++|+|+|||++|++.++|.|.++.+|.|++++.|+||.|+|||+|||+|++||.+|++.|++|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 46999999999999999999999999888999865567999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCC
Q 010821 104 VLLATEPNFM 113 (500)
Q Consensus 104 ~l~v~~~~~~ 113 (500)
+|.|.+++..
T Consensus 82 vi~V~~~~~~ 91 (252)
T 2qlv_B 82 YIEVRQPEKN 91 (252)
T ss_dssp EEEECC----
T ss_pred eeeccCcccc
Confidence 9999887544
No 9
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.90 E-value=1.1e-22 Score=198.86 Aligned_cols=195 Identities=18% Similarity=0.313 Sum_probs=156.3
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccc-ccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL-PICAI 352 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~-~v~~l 352 (500)
+|.++++++.+++|+.+|+++|.+++++++||++ ++++ +++|++|.+||++++...... ..+.. ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d--~~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVN--AGNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEEC--TTTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEE--CCCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 4777899999999999999999999999999993 3356 899999999999876432111 00000 00000
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHH
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 432 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~ 432 (500)
+.....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....... ...++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID-----ENEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC-----TTCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC-----CCCCHHH
Confidence 0111235677799899999999999999999999999999999999999999999999987654322 1235554
Q ss_pred HHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 433 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 433 ~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.+++.+++||++ +|+++|+||.+||++++.
T Consensus 153 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 -------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred -------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 5577899999999999999999999999999996 699999999999998863
No 10
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.87 E-value=4.2e-22 Score=196.75 Aligned_cols=190 Identities=18% Similarity=0.235 Sum_probs=155.0
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.++++++.+++++.+|+++|.+++++++||+ + + +++|++|..||++++...... ....+.+
T Consensus 24 dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~--d---~---~l~GivT~~Di~~~~~~~~~~--------~~~~~~~ 87 (296)
T 3ddj_A 24 TLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVA--N---E---KIEGLLTTRDLLSTVESYCKD--------SCSQGDL 87 (296)
T ss_dssp GTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEE--S---S---SEEEEEEHHHHHGGGTTCC-----------CCHHHH
T ss_pred HhccCCCcEECCCccHHHHHHHHHHCCCceEEEE--C---C---eEEEEEeHHHHHHHhcccccc--------cccchhh
Confidence 3577789999999999999999999999999999 3 5 799999999999876432110 0001000
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHH
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 432 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~ 432 (500)
+.....+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++...... ....++.+
T Consensus 88 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~------~~~~~v~~ 160 (296)
T 3ddj_A 88 -YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDL------DEIFPVKV 160 (296)
T ss_dssp -HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGS------CCCCBHHH
T ss_pred -HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcc------cccccHHH
Confidence 00011245677988999999999999999999999999999999999999999999998765432 12457887
Q ss_pred HHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 433 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 433 ~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+| .+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 161 ~m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 161 FM-------------STKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HS-------------BCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred hh-------------cCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 54 678999999999999999999999999999995 799999999999998763
No 11
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.86 E-value=7.9e-22 Score=194.14 Aligned_cols=86 Identities=24% Similarity=0.458 Sum_probs=79.1
Q ss_pred CceeeEEEEecC-CCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCCCCee-eCCCCC
Q 010821 23 TVLIPMRFVWPY-GGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFI-SSEYGI 100 (500)
Q Consensus 23 ~~~~~~~f~~~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~-~~~~g~ 100 (500)
....|++|+|++ +|++|+|+||||||+..+||.|.+ ++|.|+++++||||+|+|||+|||+|++||++|.+ +|++|+
T Consensus 167 ~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~ 245 (294)
T 3nme_A 167 LKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGK-GTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGH 245 (294)
T ss_dssp CCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECT-TTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSC
T ss_pred cccccceeeeccCCCCEEEEEEeccCCCCcccceEcC-CCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCC
Confidence 456899999999 789999999999999878999853 47999999999999999999999999999999975 899999
Q ss_pred eeeEEEecc
Q 010821 101 VNTVLLATE 109 (500)
Q Consensus 101 ~nn~l~v~~ 109 (500)
+||+|.|.+
T Consensus 246 ~nn~~~v~~ 254 (294)
T 3nme_A 246 TNNYAKVVD 254 (294)
T ss_dssp CEEEEEECC
T ss_pred EeEEEEECC
Confidence 999999986
No 12
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.85 E-value=4.4e-21 Score=192.50 Aligned_cols=205 Identities=17% Similarity=0.261 Sum_probs=159.4
Q ss_pred cc--CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 274 AF--PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 274 ~~--~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+| ..+++++++++++.+|++.|.+++++++||++ .+.+ +++|++|.+|++..+...+..... ....+..
T Consensus 40 im~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d--~~~~---~~vGivt~~Dll~~l~~~~~~~~~----~~~~l~~ 110 (330)
T 2v8q_E 40 LIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWD--SKKQ---SFVGMLTITDFINILHRYYKSALV----QIYELEE 110 (330)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEE--TTTT---EEEEEEEHHHHHHHHHHHHHHHTT----TCCCGGG
T ss_pred hccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEe--CCCC---eEEEEEEHHHHHHHHHHHHhcccc----chhHHhh
Confidence 56 67899999999999999999999999999995 3335 799999999999887654321000 0011222
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHHHccccc--ccCcccc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYA--HINLSEM 428 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~-~g~lvGiis~~Di~~~~~~~~~~--~~~~~~~ 428 (500)
..+..+...++++|.++++++.+++++.+|+++|.+++++.+||+|+ +|+++|+||.+|+++........ ...+...
T Consensus 111 ~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 190 (330)
T 2v8q_E 111 HKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSK 190 (330)
T ss_dssp CBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGS
T ss_pred ccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcC
Confidence 23333444567789999999999999999999999999999999998 89999999999999866432110 0011234
Q ss_pred cHHHHHhcCCCCCCcccccC-CCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 429 TIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 429 ~v~~~l~~~~~~~~~~~im~-~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
++.++. +|. +++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 191 ~v~~~~-----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 191 SLEELQ-----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp BHHHHT-----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGG
T ss_pred CHHHhc-----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHh
Confidence 555542 344 68899999999999999999999999999995 799999999999988653
No 13
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.85 E-value=1e-20 Score=189.17 Aligned_cols=202 Identities=12% Similarity=0.223 Sum_probs=151.7
Q ss_pred CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccccc
Q 010821 276 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 355 (500)
Q Consensus 276 ~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~ 355 (500)
..++++++.++|+.+|++.|.+++++++||++ ++.+ +++|++|.+|++.++...+.... .. ..+......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d--~~~~---~lvGilt~~Dl~~~l~~~~~~~~----~~-~~l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWD--SKTS---RFAGLLTTTDFINVIQYYFSNPD----KF-ELVDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEE--TTTT---EEEEEECHHHHHHHHHHHHHCGG----GG-GGGGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEe--CCCC---eEEEEEEHHHHHHHHHHHHcCcc----hh-HHHHHHHHH
Confidence 34689999999999999999999999999994 4445 79999999999998765432210 00 011111111
Q ss_pred ccC--cccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCc-----EEEEEeHHHHHHHHHcccccccCcccc
Q 010821 356 TWV--PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDS-----LLDIYCRSDITALAKDKAYAHINLSEM 428 (500)
Q Consensus 356 ~~~--~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~-----lvGiis~~Di~~~~~~~~~~~~~~~~~ 428 (500)
.+. .++.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|++......... ......
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 111 0234557788999999999999999999999999999998775 99999999999866432211 112345
Q ss_pred cHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 429 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 429 ~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
++.+++ -.|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 188 ~v~~~~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 188 PIGDLN----------IITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp BGGGTT----------CSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHH
T ss_pred cHHHcC----------CCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHh
Confidence 666541 015778999999999999999999999999999995 799999999999998764
No 14
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.81 E-value=5.5e-20 Score=179.94 Aligned_cols=173 Identities=16% Similarity=0.230 Sum_probs=129.9
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|.++++++.+++++.+|+++|.+++++++||++ + ++ +++|+++..||++.+. ..
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d--~-~~---~~~Giv~~~dl~~~~~-------------~~------ 60 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVN--K-EG---KLVGIISVKRILVNPD-------------EE------ 60 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEEC--T-TC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEc--C-CC---cEEEEEEHHHHHhhhc-------------cC------
Confidence 3667889999999999999999999999999993 2 45 7999999999985321 11
Q ss_pred ccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHH-HHHcccccccCcccccHHH
Q 010821 354 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQ 432 (500)
Q Consensus 354 i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~ 432 (500)
+++++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++ ....+.. ....++.+
T Consensus 61 ------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~----~~~~~v~~ 130 (282)
T 2yzq_A 61 ------QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK----YKGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG----GGGCBSTT
T ss_pred ------CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC----cccCcHHH
Confidence 345558878899999999999999999999999999998899999999999987 5543210 11234443
Q ss_pred HHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 010821 433 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 495 (500)
Q Consensus 433 ~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl 495 (500)
+|..+++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+||+
T Consensus 131 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 -------------YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDS-EGNLVGIVDETDLL 179 (282)
T ss_dssp -------------TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGG
T ss_pred -------------HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHh
Confidence 56778999999999999999999999999999995 68999999999998
No 15
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.81 E-value=1.8e-19 Score=180.97 Aligned_cols=204 Identities=12% Similarity=0.156 Sum_probs=150.3
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++++++++.+|++.|.+++++++||++ .+.+ +++|+++.+||++++...+..... ...+ ..+...++..
T Consensus 32 ~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d--~~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 104 (334)
T 2qrd_G 32 FRLIVFDVTLFVKTSLSLLTLNNIVSAPLWD--SEAN---KFAGLLTMADFVNVIKYYYQSSSF-PEAI-AEIDKFRLLG 104 (334)
T ss_dssp EEEEEEETTSBHHHHHHHHHHHTCSCEEEEE--TTTT---EEEEEECHHHHHHHHHHHHHHCSC-GGGG-GGGGSCBHHH
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCeEEEEEe--CCCC---eEEEEEEHHHHHHHHHHHhhccCC-ccHH-HHHhhhchhh
Confidence 3588999999999999999999999999994 3435 799999999999887543221000 0000 0111111111
Q ss_pred cCcccCCCCCCCc--eEecCCCCHHHHHHHHHHCCCCEEEEEcCCC-c----EEEEEeHHHHHHHHHcccccccCccccc
Q 010821 357 WVPKIGEPNRRPL--AMLRPSASLSAALNLLVQAQVSSIPIVDDND-S----LLDIYCRSDITALAKDKAYAHINLSEMT 429 (500)
Q Consensus 357 ~~~~v~d~m~~~~--~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g-~----lvGiis~~Di~~~~~~~~~~~~~~~~~~ 429 (500)
+....+++|.+++ +++.+++++.+|++.|.+++++++||+|++| + ++|++|.+|++........ ...+...+
T Consensus 105 i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~-~~~~~~~~ 183 (334)
T 2qrd_G 105 LREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK-ETAMLRVP 183 (334)
T ss_dssp HHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG-GGGGCCCB
T ss_pred HHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc-chhhhhCc
Confidence 1111123355566 8999999999999999999999999999765 4 9999999999986643211 11122345
Q ss_pred HHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 430 IHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 430 v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+.++. .+|.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 184 v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 184 LNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHT
T ss_pred HHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhh
Confidence 55421 136788999999999999999999999999999995 699999999999998764
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.79 E-value=1.1e-19 Score=164.76 Aligned_cols=125 Identities=22% Similarity=0.350 Sum_probs=103.6
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccc------c----------
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH------I---------- 423 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~------~---------- 423 (500)
+|+++|+++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++......... .
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 456669999999999999999999999999999999999999999999999976432110000 0
Q ss_pred --CcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 424 --NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 424 --~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.....++. ++|++++++|++++++.+|+++|.+++++++||+| +|+++|+||++||+++|+
T Consensus 99 ~~~~~~~~v~-------------~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 99 FETGRKLTAS-------------AVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HHHHTTCBHH-------------HHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSC
T ss_pred hccccccchh-------------hhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 00112333 36789999999999999999999999999999999 599999999999999875
No 17
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.75 E-value=6.4e-18 Score=145.84 Aligned_cols=120 Identities=16% Similarity=0.305 Sum_probs=105.1
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|. ..++++.+++++.+|+++|.+++++++||+|++ |+++|+||.+|++.....+. ...++.++|
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~~m-- 78 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGAVM-- 78 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHHHS--
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHHHh--
Confidence 5677798 456789999999999999999999999999987 89999999999998765431 246787754
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+++.++.+++++.+|+++|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 79 ------------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 79 ------------RPIQVVLNNTALPKVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ------------EECCEEETTSCHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred ------------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHHHcC
Confidence 35789999999999999999999999999995 7999999999999999976
No 18
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=8.9e-18 Score=148.24 Aligned_cols=119 Identities=19% Similarity=0.315 Sum_probs=105.2
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++....... ..++.+
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 92 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEE---- 92 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGG----
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHH----
Confidence 45666987 89999999999999999999999999999987 89999999999998654431 245655
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+| ++++++++++++.+|+++|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 93 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 ---------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE-YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT-TSSEEEEEEHHHHHHHHHH
T ss_pred ---------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 56 68899999999999999999999999999995 7999999999999999864
No 19
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.74 E-value=5.6e-18 Score=151.35 Aligned_cols=121 Identities=21% Similarity=0.294 Sum_probs=99.6
Q ss_pred CCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCC
Q 010821 363 EPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 440 (500)
Q Consensus 363 d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 440 (500)
++|. .+++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++...........+...++.+
T Consensus 19 ~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~-------- 90 (156)
T 3k6e_A 19 TFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH-------- 90 (156)
T ss_dssp GGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG--------
T ss_pred HhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHH--------
Confidence 3364 468999999999999999999999999999999999999999999986554322211122345554
Q ss_pred CCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 441 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 441 ~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++++|++++++.+|+++|.+++ .+||||+ +|+++|+||++||++++.
T Consensus 91 -----im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~-~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 91 -----MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp -----TCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -----hhcCCceecccccHHHHHHHHHHHcC--CeEEEec-CCEEEEEEEHHHHHHHHH
Confidence 56889999999999999999999876 4999995 799999999999999873
No 20
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.74 E-value=3.2e-18 Score=147.09 Aligned_cols=120 Identities=13% Similarity=0.391 Sum_probs=101.9
Q ss_pred ccCCCCCCC--ceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.++ ++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|+++..... ....++.++|
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~------~~~~~v~~~m-- 75 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD------AEAFSMDKVL-- 75 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT------CCCCCHHHHC--
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc------CCCCCHHHHc--
Confidence 345568744 8899999999999999999999999999987 8999999999998754322 1246788754
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
. ++.++.+++++.+|+++|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 76 -----------~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 76 -----------R-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp -----------B-CCCEEETTCBHHHHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHHC--
T ss_pred -----------C-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 3 4778999999999999999999999999995 7999999999999999875
No 21
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.73 E-value=3e-17 Score=148.94 Aligned_cols=119 Identities=19% Similarity=0.350 Sum_probs=106.0
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|+||.+|++.....+. ..++.+
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 111 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVD---- 111 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGG----
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHH----
Confidence 5677898 678999999999999999999999999999987 99999999999998765431 355665
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+| ++++++.+++++.+|+++|.+++.+++||+|+ +|+++|+||+.||++++++
T Consensus 112 ---------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 112 ---------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHHHhC
Confidence 56 78999999999999999999999999999995 6999999999999999875
No 22
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.73 E-value=1.3e-17 Score=141.83 Aligned_cols=117 Identities=20% Similarity=0.356 Sum_probs=104.4
Q ss_pred cCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCC
Q 010821 361 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 440 (500)
Q Consensus 361 v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 440 (500)
++++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++.....+ ..++.+
T Consensus 3 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~--------~~~v~~-------- 66 (122)
T 3kpb_A 3 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN--------KKTIEE-------- 66 (122)
T ss_dssp HHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT--------CCBGGG--------
T ss_pred hHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc--------ccCHHH--------
Confidence 4566888999999999999999999999999999999999999999999999876543 135665
Q ss_pred CCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 441 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 441 ~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 67 -----~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 67 -----IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp -----TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHC
T ss_pred -----HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHHHhh
Confidence 45678999999999999999999999999999995 699999999999999875
No 23
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.73 E-value=1.1e-17 Score=144.50 Aligned_cols=121 Identities=12% Similarity=0.203 Sum_probs=102.9
Q ss_pred cCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcC
Q 010821 361 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 437 (500)
Q Consensus 361 v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~-~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 437 (500)
++++|. .+++++.+++++.+|+++|.+++++++||+++ +|+++|++|.+|+++....+.. +...++.++
T Consensus 4 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~~---- 75 (130)
T 3hf7_A 4 VNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLRA---- 75 (130)
T ss_dssp HHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHHH----
T ss_pred HHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHHh----
Confidence 455675 36889999999999999999999999999975 5899999999999987654321 123456664
Q ss_pred CCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 438 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 438 ~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
| ++++++.+++++.+|++.|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 76 ---------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 76 ---------A-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ---------S-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHHHHC
T ss_pred ---------c-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHHHhC
Confidence 3 56889999999999999999999999999995 7999999999999999876
No 24
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.72 E-value=6.1e-18 Score=145.82 Aligned_cols=118 Identities=14% Similarity=0.334 Sum_probs=100.7
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||.+|+++..... ..++.+
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~---- 73 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRS---- 73 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGG----
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHH----
Confidence 3455687 568899999999999999999999999999985 8999999999998754321 345665
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+|. +++++.+++++.+|+++|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 74 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 ---------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ---------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHHHH
T ss_pred ---------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 343 5789999999999999999999999999995 6999999999999999874
No 25
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.71 E-value=5.7e-17 Score=138.31 Aligned_cols=119 Identities=18% Similarity=0.274 Sum_probs=104.4
Q ss_pred cCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCC
Q 010821 361 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 440 (500)
Q Consensus 361 v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~ 440 (500)
++++|.++++++.+++++.+|++.|.+++.+.+||+| +|+++|+|+.+|+++....+.. ....++.+++
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~----~~~~~v~~~m------ 71 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD----LAEVKVWEVM------ 71 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC----TTTSBHHHHC------
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc----ccccCHHHHc------
Confidence 4556888899999999999999999999999999999 8999999999999986654321 2356788754
Q ss_pred CCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 441 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 441 ~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+++.++.+++++.+|++.|.+++.+++||+| + |+++|+||.+||++++.
T Consensus 72 -------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 72 -------ERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKM 121 (125)
T ss_dssp -------BCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC
T ss_pred -------CCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 67899999999999999999999999999999 3 99999999999999875
No 26
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=5.2e-17 Score=141.98 Aligned_cols=120 Identities=14% Similarity=0.214 Sum_probs=104.3
Q ss_pred cccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCC--cEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 359 PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND--SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 359 ~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g--~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
.+++++|.++++++.+++++.+|+++|.+++++++||+|++| +++|+||.+|+++....+.. ...++.+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~---- 75 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD-----LDGPAMP---- 75 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC-----TTSBSGG----
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC-----CCCCHHH----
Confidence 356777999999999999999999999999999999999888 99999999999986654311 1355555
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
+|.+++.++.++ ++.+|+++|.+++.+++||+|+ +|+++|+||.+||++++
T Consensus 76 ---------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 76 ---------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-NGELVGVLSIRDLCFER 126 (141)
T ss_dssp ---------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHSCH
T ss_pred ---------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-CCcEEEEEEHHHHHHHH
Confidence 557789999999 9999999999999999999995 79999999999998754
No 27
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.71 E-value=5.6e-17 Score=143.30 Aligned_cols=118 Identities=12% Similarity=0.284 Sum_probs=104.3
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcC
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 437 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 437 (500)
+++++|.+ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++....+.. +...++.++|
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~~m--- 101 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD----MRDASIADVM--- 101 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC----CTTCBHHHHS---
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC----cccCcHHHHc---
Confidence 56677988 89999999999999999999999999999999999999999999987654321 3357888755
Q ss_pred CCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 010821 438 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 496 (500)
Q Consensus 438 ~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~ 496 (500)
.+++++|++++++.+|+++|.+++++++||+|+ ++++|+||.+||++
T Consensus 102 ----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 102 ----------TRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp ----------EESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred ----------CCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 668899999999999999999999999999994 49999999999975
No 28
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.70 E-value=7.4e-17 Score=143.03 Aligned_cols=135 Identities=33% Similarity=0.565 Sum_probs=109.1
Q ss_pred cccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccC
Q 010821 345 LKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHIN 424 (500)
Q Consensus 345 l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~ 424 (500)
....++.+.+ +++ ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++......+.
T Consensus 16 ~~~~l~~~~v-------~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~--- 83 (152)
T 2uv4_A 16 MSKSLEELQI-------GTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN--- 83 (152)
T ss_dssp HTSBHHHHTC-------SBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC---
T ss_pred HHhhHHHccC-------Ccc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh---
Confidence 3455555543 443 5788999999999999999999999999999899999999999999876544221
Q ss_pred cccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 425 LSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 425 ~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
....++.++|... .+|.+++.++.+++++.+|+++|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 84 ~~~~~v~~~m~~~-------~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 84 NLDVSVTKALQHR-------SHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 150 (152)
T ss_dssp CTTSBGGGGGGTC-------CHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHC
T ss_pred hhcchHHHHHhhh-------hcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 1245677765321 123368899999999999999999999999999995 699999999999999875
No 29
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.70 E-value=3.4e-17 Score=145.44 Aligned_cols=118 Identities=18% Similarity=0.309 Sum_probs=102.7
Q ss_pred cCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEE-cC-CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 361 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIV-DD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 361 v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVv-d~-~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
++++|.+ +++++.+++++.+|+++|.+++++++||+ |+ +|+++|+||.+|++.....+. ..++.+
T Consensus 22 v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 90 (153)
T 3oco_A 22 ASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKIST---- 90 (153)
T ss_dssp HHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGG----
T ss_pred eeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHH----
Confidence 4455875 78999999999999999999999999999 65 489999999999998654431 245655
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+| ++++++.+++++.+|+++|.+++.+++||||+ +|+++|+||++||+++++|
T Consensus 91 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 91 ---------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHHHC
T ss_pred ---------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHHhc
Confidence 56 68999999999999999999999999999995 7999999999999999875
No 30
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=1.3e-16 Score=142.56 Aligned_cols=121 Identities=16% Similarity=0.312 Sum_probs=103.5
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
+++++|.+ ++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++....+.. ....++.++
T Consensus 18 ~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~~------ 86 (159)
T 3fv6_A 18 QVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHII------ 86 (159)
T ss_dssp BGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGGT------
T ss_pred CHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHHH------
Confidence 45666876 4599999999999999999999999999989999999999999986533211 234677764
Q ss_pred CCCcccccCC--CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCC---eEEEEEehHHHHHHhh
Q 010821 440 SYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSK---RVEGIVSLSDIFKFLL 499 (500)
Q Consensus 440 ~~~~~~im~~--~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g---~liGiIS~~DIl~~l~ 499 (500)
|.+ +++++.+++++.+|+++|.+++++++||||+ +| +++|+||.+||++++.
T Consensus 87 -------m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 87 -------MTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -------SEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHH
T ss_pred -------HcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHH
Confidence 455 7899999999999999999999999999995 57 9999999999999874
No 31
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=1.6e-17 Score=144.67 Aligned_cols=121 Identities=13% Similarity=0.283 Sum_probs=101.2
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||.+|+++...... ....++.+
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-----~~~~~v~~---- 74 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD-----GDSDDVKK---- 74 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS-----GGGCCGGG----
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc-----CCCcCHHH----
Confidence 3455687 568899999999999999999999999999987 89999999999987544211 12355665
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
+|. +++++.+++++.+|+++|.+++.+++||+|+ +|+++|+||++||++.++|
T Consensus 75 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 ---------LLR-PATFVPESKRLNVLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ---------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 444 4889999999999999999999999999995 7999999999999998764
No 32
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=1.7e-16 Score=142.00 Aligned_cols=125 Identities=20% Similarity=0.252 Sum_probs=104.8
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHccccc----ccCcccccHHHHHh
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYA----HINLSEMTIHQALQ 435 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~----~~~~~~~~v~~~l~ 435 (500)
+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|++......... .......++.++
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~i-- 83 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEV-- 83 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHH--
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHH--
Confidence 46677988899999999999999999999999999999889999999999998865431100 001224567764
Q ss_pred cCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 436 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 436 ~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
|.+++++|.+++++.+|++.|.+++.+++|||| + |+++|+||.+||++++.
T Consensus 84 -----------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 84 -----------MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp -----------SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHH
T ss_pred -----------hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999 3 99999999999999864
No 33
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=6.1e-17 Score=142.83 Aligned_cols=126 Identities=19% Similarity=0.353 Sum_probs=102.9
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccc---------cccCcccc
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY---------AHINLSEM 428 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~---------~~~~~~~~ 428 (500)
+++++|.+ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|++.+...... ........
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 46677887 79999999999999999999999999999999999999999999753211100 00011235
Q ss_pred cHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 429 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 429 ~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
++.++ |.++++++.+++++.+|+++|.+++.+++||||+ +|+++|+||.+||++++.
T Consensus 86 ~v~~~-------------m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 86 LVGDL-------------MTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS-DGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp BHHHH-------------SEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred cHHHh-------------cCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC-CCcEEEEEEHHHHHHHHH
Confidence 66664 4667889999999999999999999999999995 799999999999999875
No 34
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.69 E-value=1.9e-16 Score=137.53 Aligned_cols=121 Identities=20% Similarity=0.400 Sum_probs=104.7
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHH-HHHHHcccccccCcccccHHHHHhcCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDI-TALAKDKAYAHINLSEMTIHQALQLGQ 438 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di-~~~~~~~~~~~~~~~~~~v~~~l~~~~ 438 (500)
+++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|+++.+|+ ......+. ....++.+++
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~~m---- 79 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY-----TLETTIGDVM---- 79 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC-----CSSCBHHHHS----
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc-----cCCcCHHHHh----
Confidence 4566688889999999999999999999999999999988999999999999 77554321 2246788754
Q ss_pred CCCCcccccCCCceEeCCCCCHHHHHHHHhcCC-----CCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 439 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPG-----VRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 439 ~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~-----~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+++.++.+++++.+|++.|.+++ .+++||+|+ +|+++|+||.+||++++.
T Consensus 80 ---------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 80 ---------TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp ---------CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ---------CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 678899999999999999999999 999999995 799999999999999874
No 35
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.69 E-value=3e-17 Score=141.11 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=103.6
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
+++++|.+++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|+++....+.. ...++.+
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~-----~~~~v~~------- 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT-----VKEKLGE------- 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC-----TTCBCCG-------
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc-----ccCcHHH-------
Confidence 456679999999999999999999999999999999998 999999999999875433211 1134554
Q ss_pred CCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 440 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 440 ~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 73 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 73 ------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADE-DGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp ------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 55778999999999999999999999999999995 799999999999999874
No 36
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=2.1e-16 Score=138.10 Aligned_cols=125 Identities=27% Similarity=0.501 Sum_probs=101.7
Q ss_pred CCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCc
Q 010821 364 PNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSP 443 (500)
Q Consensus 364 ~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 443 (500)
+|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++....+.+ .....++.++|.....
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m~~~~~---- 88 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY---NDLSLSVGEALMRRSD---- 88 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc---ccCCccHHHHHhcCcc----
Confidence 366789999999999999999999999999999988999999999999986654321 1235788887632100
Q ss_pred ccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 444 YELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 444 ~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
. ..++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||.+||++++.
T Consensus 89 ~---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 89 D---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp --------CEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred c---cCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 0 026889999999999999999999999999995 799999999999999875
No 37
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.69 E-value=4.4e-17 Score=140.80 Aligned_cols=121 Identities=17% Similarity=0.257 Sum_probs=104.1
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHH-HHHcccccccCcccccHHHHHhcCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQ 438 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~~l~~~~ 438 (500)
+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+|+.+|++. +...+.. ....++.+++
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~~m---- 80 (133)
T 1y5h_A 9 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----PNTATAGELA---- 80 (133)
T ss_dssp CHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC----TTTSBHHHHH----
T ss_pred CHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC----ccccCHHHHh----
Confidence 345558888999999999999999999999999999998899999999999984 4433211 2346788866
Q ss_pred CCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 439 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 439 ~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+++.++++++++.+|+++|.+++.+++||+|+ |+++|+||.+||++++.
T Consensus 81 ---------~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 81 ---------RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLP 130 (133)
T ss_dssp ---------TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC
T ss_pred ---------cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 668899999999999999999999999999993 89999999999999875
No 38
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=2.4e-16 Score=136.98 Aligned_cols=120 Identities=18% Similarity=0.364 Sum_probs=103.8
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHH-HHHcccccccCcccccHHHHHhcCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQ 438 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~~l~~~~ 438 (500)
+++++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++ +...+. ....++.+
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~------ 76 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----PYDIPVER------ 76 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----CTTSBGGG------
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----cccCCHHH------
Confidence 456779889999999999999999999999999999998899999999999974 433321 12356665
Q ss_pred CCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 439 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 439 ~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.+++.+++ |+|+ +|+++|+||.+||++++.
T Consensus 77 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 77 -------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp -------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHH
T ss_pred -------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHH
Confidence 557789999999999999999999999999 9995 799999999999999875
No 39
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.69 E-value=1.8e-16 Score=136.94 Aligned_cols=120 Identities=15% Similarity=0.234 Sum_probs=104.6
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
+++++|.+++.++.+++++.+|++.|.+++++.+||+| +|+++|+++.+|++.....+.. ...++.+
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~------- 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS-----LETKAEE------- 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC-----TTCBGGG-------
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC-----cccCHHH-------
Confidence 45677988899999999999999999999999999999 8999999999999886654321 1356665
Q ss_pred CCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 440 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 440 ~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||..||++++.
T Consensus 72 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 72 ------FMTASLITIREDSPITGALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAID 124 (133)
T ss_dssp ------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 45678899999999999999999999999999995 799999999999998864
No 40
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=7.9e-17 Score=143.33 Aligned_cols=123 Identities=20% Similarity=0.279 Sum_probs=101.5
Q ss_pred cCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCC
Q 010821 361 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQ 438 (500)
Q Consensus 361 v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~ 438 (500)
++++|. ++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|++.......+....+...++.+
T Consensus 17 v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~------ 90 (156)
T 3ctu_A 17 EETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH------ 90 (156)
T ss_dssp GGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG------
T ss_pred HHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH------
Confidence 445587 678999999999999999999999999999999999999999999986654322111112355665
Q ss_pred CCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 439 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 439 ~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.++++++.+++++.+|++.|.+++ ++||||+ +|+++|+||.+||++++.
T Consensus 91 -------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 91 -------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp -------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT-TSBEEEEEETTHHHHHHH
T ss_pred -------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 55778999999999999999999986 7999995 799999999999999874
No 41
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.69 E-value=2e-16 Score=143.67 Aligned_cols=118 Identities=15% Similarity=0.192 Sum_probs=102.0
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|+ .+++++.+++++.+|+++|.+++++++||+|++ |+++|+|+.+|++....... ..++. +
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~--~-- 105 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN--R-- 105 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG--G--
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH--h--
Confidence 4567786 468899999999999999999999999999976 89999999999998654321 23444 2
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
.++++++.+++++.+|+++|.+++.+++||+|+ +|+++|+||+.||++.++|
T Consensus 106 -----------~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 106 -----------LRDPIIVHESIGILRLMDTLKRSRGQLVLVADE-FGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp -----------SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-TCCEEEEECHHHHHHHHHC
T ss_pred -----------cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-CCCEEEEEeHHHHHHHHhC
Confidence 357889999999999999999999999999995 7999999999999999875
No 42
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.68 E-value=3e-16 Score=140.40 Aligned_cols=130 Identities=15% Similarity=0.240 Sum_probs=104.4
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcC--CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 437 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 437 (500)
+++++|.++++++.+++++.+|+++|.+++++++||+|+ +|+++|+||.+|+......+..........++.+++...
T Consensus 14 ~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~ 93 (164)
T 2pfi_A 14 RVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARG 93 (164)
T ss_dssp BHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTT
T ss_pred CHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhccc
Confidence 445568889999999999999999999999999999996 799999999999998665432111112246788877432
Q ss_pred CCCCCcccccCCC-ceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 438 QDSYSPYELRSQR-CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 438 ~~~~~~~~im~~~-~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
. ...+ +++|.+++++.+|+++|.+++.+++||+| +|+++|+||.+||++++.
T Consensus 94 ~--------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 94 C--------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp C--------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred c--------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 1 0112 78899999999999999999999999999 499999999999999874
No 43
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=1.5e-16 Score=143.11 Aligned_cols=122 Identities=18% Similarity=0.325 Sum_probs=104.6
Q ss_pred ccCCCCCC---CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNRR---PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~---~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.+ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+...... ....++.+
T Consensus 25 ~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~---- 97 (165)
T 3fhm_A 25 FVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAA---SLQQSVSV---- 97 (165)
T ss_dssp BHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGG---GGTSBGGG----
T ss_pred CHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCc---cccCCHHH----
Confidence 45556874 689999999999999999999999999999999999999999999865543211 22456666
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++++|.+++++.+|+++|.+++++++||+| + |+++|+||..||++++.
T Consensus 98 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 98 ---------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp ---------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 4577899999999999999999999999999999 3 99999999999999875
No 44
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=4.6e-16 Score=138.62 Aligned_cols=124 Identities=8% Similarity=0.121 Sum_probs=103.9
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCE-EEEEcCCCcEEEEEeHHHHHHHHHcc---ccc--------ccCccc
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSS-IPIVDDNDSLLDIYCRSDITALAKDK---AYA--------HINLSE 427 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~-lpVvd~~g~lvGiis~~Di~~~~~~~---~~~--------~~~~~~ 427 (500)
+++++|.++++++.+++++.+|+++|.+++++. +||+|++ +++|+||.+|+++..... ... ......
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 567779999999999999999999999999999 9999987 999999999998754311 000 001234
Q ss_pred ccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 428 MTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 428 ~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.++.++ |.+ ++++.+++++.+|+++|.+++++++||||+ +|+++|+||.+||++++.
T Consensus 96 ~~v~~i-------------m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 96 KNASEI-------------MLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-KGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CBHHHH-------------CBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred CcHHHH-------------cCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 566664 467 899999999999999999999999999995 799999999999999874
No 45
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.66 E-value=2.5e-16 Score=139.05 Aligned_cols=124 Identities=22% Similarity=0.228 Sum_probs=101.9
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccc-cCcccccHHHHHhc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH-INLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~-~~~~~~~v~~~l~~ 436 (500)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++......... ......++.+
T Consensus 16 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 91 (150)
T 3lqn_A 16 FVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ---- 91 (150)
T ss_dssp BHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----
T ss_pred ChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----
Confidence 3445587 45899999999999999999999999999999999999999999998654321100 0112345555
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|+++|.++++ +||||+ +|+++|+||.+||++++.
T Consensus 92 ---------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 92 ---------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE-DGYFEGILTRRAILKLLN 142 (150)
T ss_dssp ---------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ---------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC-CCcEEEEEEHHHHHHHHH
Confidence 557789999999999999999999987 999995 799999999999999874
No 46
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=2.3e-16 Score=143.44 Aligned_cols=126 Identities=25% Similarity=0.377 Sum_probs=101.6
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccc--------cc-------
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY--------AH------- 422 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~--------~~------- 422 (500)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|+||.+||+++...... ..
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 34566877 78999999999999999999999999999999999999999999852210000 00
Q ss_pred --------cCcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHH
Q 010821 423 --------INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDI 494 (500)
Q Consensus 423 --------~~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DI 494 (500)
......++.+ +|.+++++|.+++++.+|+++|.+++++++||+|+ +|+++|+||.+||
T Consensus 85 ~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~di 150 (180)
T 3sl7_A 85 FNELQKLISKTYGKVVGD-------------LMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA-DGKLIGILTRGNV 150 (180)
T ss_dssp HHHHHHHHHTTTTCBHHH-------------HSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT-TCBEEEEEEHHHH
T ss_pred hHHHHHHHhccccccHHH-------------HhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHH
Confidence 0011244554 45778899999999999999999999999999995 7999999999999
Q ss_pred HHHhh
Q 010821 495 FKFLL 499 (500)
Q Consensus 495 l~~l~ 499 (500)
++++.
T Consensus 151 l~~~~ 155 (180)
T 3sl7_A 151 VRAAL 155 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
No 47
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.66 E-value=3.4e-16 Score=135.62 Aligned_cols=119 Identities=13% Similarity=0.278 Sum_probs=101.7
Q ss_pred cCCCCC---CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHH-HHHcccccccCcccccHHHHHhc
Q 010821 361 IGEPNR---RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 361 v~d~m~---~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
++++|. ++++++.+++++.+|++.|.+++++++||+| +|+++|+|+.+|+++ +...+. .....++.+
T Consensus 8 v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~----~~~~~~v~~---- 78 (135)
T 2rc3_A 8 VKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK----PVKDTQVKE---- 78 (135)
T ss_dssp HHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS----CGGGSBGGG----
T ss_pred HHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC----CcccCCHHH----
Confidence 445577 7899999999999999999999999999998 899999999999986 333221 122456665
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|+++|.+++.+++||+| +|+++|+||.+||++++.
T Consensus 79 ---------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 79 ---------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp ---------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred ---------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHH
Confidence 4577899999999999999999999999999999 499999999999999875
No 48
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.65 E-value=8.6e-16 Score=143.42 Aligned_cols=162 Identities=15% Similarity=0.146 Sum_probs=128.4
Q ss_pred EEeeHHHHHHHHHHhcCCCCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhc---C
Q 010821 223 GVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN---E 299 (500)
Q Consensus 223 Gilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~---~ 299 (500)
.-++..|.++++..+ +.....+.+..+.......+...+.++...+|.+|.++++++.+++|+.+|++.|.++ +
T Consensus 11 ~~m~~dd~~dll~~l---~~~~~~~~l~~l~~~e~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~ 87 (205)
T 3kxr_A 11 AQLSPEDLIEWSDYL---PESFTDRALAQMGERQRQRFELYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDC 87 (205)
T ss_dssp GGSCHHHHHHTTTTS---CHHHHHHHHHHSCHHHHHHHHHHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTT
T ss_pred HcCCHHHHHHHHHhC---CHHHHHHHHHcCCHHHHHHHHHHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccC
Confidence 335667777766543 1112234444555666666777778888889999999999999999999999999997 8
Q ss_pred CceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHH
Q 010821 300 VATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLS 379 (500)
Q Consensus 300 i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ 379 (500)
++.+||++ +++ +++|++|.+|++.. ....+ ++++|.++++++++++++.
T Consensus 88 ~~~~~Vvd---~~~---~lvGivt~~dll~~-------------~~~~~------------v~~im~~~~~~v~~~~~l~ 136 (205)
T 3kxr_A 88 NDNLFIVD---EAD---KYLGTVRRYDIFKH-------------EPHEP------------LISLLSEDSRALTANTTLL 136 (205)
T ss_dssp CCEEEEEC---TTC---BEEEEEEHHHHTTS-------------CTTSB------------GGGGCCSSCCCEETTSCHH
T ss_pred eeEEEEEc---CCC---eEEEEEEHHHHHhC-------------CCcch------------HHHHhcCCCeEECCCCCHH
Confidence 99999993 355 79999999998731 11223 3455888899999999999
Q ss_pred HHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 380 AALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 380 ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+|+++|.+++++.+||+|++|+++|+||..|++..+...
T Consensus 137 ~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 137 DAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp HHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999999999877654
No 49
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.65 E-value=7.5e-16 Score=136.95 Aligned_cols=124 Identities=17% Similarity=0.204 Sum_probs=102.7
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHccc-ccccCcccccHHHHHhc
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~-~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.+ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|++....... +....+...++.+
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 87 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE---- 87 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG----
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH----
Confidence 45677876 8899999999999999999999999999998899999999999988654321 1000112345554
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++.++.+++++.+|++.|.++++ +||||+ +|+++|+||.+||++++.
T Consensus 88 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 88 ---------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp ---------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHH
T ss_pred ---------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 557789999999999999999999987 999995 699999999999999874
No 50
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=6.6e-16 Score=141.52 Aligned_cols=122 Identities=16% Similarity=0.274 Sum_probs=104.7
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+++.+||+........ .....++.+
T Consensus 10 ~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~---~~~~~~v~~------- 79 (184)
T 1pvm_A 10 RVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK---KPDEVPIRL------- 79 (184)
T ss_dssp BGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC---CGGGSBGGG-------
T ss_pred CHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc---CcccCCHHH-------
Confidence 5667799899999999999999999999999999999988999999999999886542110 112356665
Q ss_pred CCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 440 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 440 ~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
+|.+++.++.+++++.+|+++|.+++.+++||+|+ +|+++|+||..||++++
T Consensus 80 ------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 80 ------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp ------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTS
T ss_pred ------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHH
Confidence 45778999999999999999999999999999995 69999999999999865
No 51
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.65 E-value=1.5e-15 Score=145.74 Aligned_cols=198 Identities=12% Similarity=0.112 Sum_probs=129.2
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCC-----CCccc---
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCS-----SSLPI--- 344 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~-----~~~~~--- 344 (500)
.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|..||++++........ .....
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd---~~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~ 84 (245)
T 3l2b_A 11 DLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD---GNN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNILD 84 (245)
T ss_dssp GSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHH
T ss_pred HhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHH
Confidence 35788899999999999999999999999999993 346 79999999999998864321100 00000
Q ss_pred ------c------cccccccccccc-CcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC------------
Q 010821 345 ------L------KLPICAIPVGTW-VPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN------------ 399 (500)
Q Consensus 345 ------l------~~~v~~l~i~~~-~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~------------ 399 (500)
+ ....+.+.++.. ...+.+.+....+.+-.+ ..+++..+.+.+++.+++++..
T Consensus 85 ~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 85 TLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence 0 000001111111 011222333333344433 4788888999999999888532
Q ss_pred CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCcccccC-CCceEeCCCCCHHHHHHHHhcCCCCEEEEE
Q 010821 400 DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLVIV 478 (500)
Q Consensus 400 g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~im~-~~~~~v~~~~tL~~a~~~m~~~~~~~l~VV 478 (500)
+.+-.+.+..|........ ....++.+ +|. +++.++++++++.+|+++|.+++++++|||
T Consensus 163 ~~~~~i~t~~d~~~~~~~~------~~~~~v~~-------------im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVv 223 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLI------VQSLPVDY-------------VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVI 223 (245)
T ss_dssp HTCEEEECSSCHHHHHHHG------GGGSBHHH-------------HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEE
T ss_pred cCCeEEEeCCChHHHHHHH------hcCCceee-------------EecCCccEEECCCCcHHHHHHHHHhcCCceEEEE
Confidence 1234455555544332221 11355666 456 789999999999999999999999999999
Q ss_pred eCCCCeEEEEEehHHHHHHh
Q 010821 479 EAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 479 d~~~g~liGiIS~~DIl~~l 498 (500)
|+ +|+++|+||++||+++.
T Consensus 224 d~-~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 224 DE-NNKVVGSIARFHLISTH 242 (245)
T ss_dssp CT-TCBEEEEEECC------
T ss_pred cC-CCeEEEEEEHHHhhchh
Confidence 95 79999999999999864
No 52
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=5.1e-16 Score=138.19 Aligned_cols=121 Identities=14% Similarity=0.316 Sum_probs=103.0
Q ss_pred ccCCCCC------CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHH
Q 010821 360 KIGEPNR------RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQA 433 (500)
Q Consensus 360 ~v~d~m~------~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~ 433 (500)
+++++|. ++++++.+++++.+|+++|.+++++.+||++ +|+++|+||.+|+++.+..... .....++.++
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~ 83 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQER---SSKATRVEEI 83 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTC---CSSSCBHHHH
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccC---CccccCHHHH
Confidence 4555576 4569999999999999999999999999965 8999999999999986543321 1235778875
Q ss_pred HhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 434 LQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 434 l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+ .+++.++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++.
T Consensus 84 m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 84 M-------------TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp S-------------BSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred c-------------CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 4 67889999999999999999999999999999 499999999999999875
No 53
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.65 E-value=5.4e-16 Score=138.45 Aligned_cols=124 Identities=18% Similarity=0.212 Sum_probs=103.1
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHccc-ccccCcccccHHHHHhc
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~-~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.+ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|++....... +........++.+++
T Consensus 15 ~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m-- 92 (159)
T 1yav_A 15 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVM-- 92 (159)
T ss_dssp BHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHS--
T ss_pred hHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhc--
Confidence 34455877 7899999999999999999999999999999899999999999998764421 100112346777754
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+++.++.+++++.+|+++|.++++ +||+|+ +|+++|+||.+||++++.
T Consensus 93 -----------~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 93 -----------LTDIPRLHINDPIMKGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp -----------BCSCCEEETTSBHHHHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred -----------CCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 6789999999999999999999987 999995 799999999999999864
No 54
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.64 E-value=1e-15 Score=142.86 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=102.5
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHC---CCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQA---QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~---~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|++++++++++.++.+|++.|.+. +++.+||+|++|+++|+||.+|++.. ....++.+
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------~~~~~v~~---- 120 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----------EPHEPLIS---- 120 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------CTTSBGGG----
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------CCcchHHH----
Confidence 45666999999999999999999999987 88999999999999999999998642 11356665
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.++++++++++++.+|++.|.+++.+.+||||+ +|+++|+||..||++.+.
T Consensus 121 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 121 ---------LLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD-AGELIGRVTLRAATALVR 173 (205)
T ss_dssp ---------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ---------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 55778999999999999999999999999999995 799999999999998863
No 55
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.63 E-value=4.3e-16 Score=138.88 Aligned_cols=114 Identities=11% Similarity=0.298 Sum_probs=99.4
Q ss_pred ccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCC-cEEEEEeHHHHHHHHHcccccccCcccccHHHHHhc
Q 010821 360 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND-SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 436 (500)
Q Consensus 360 ~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g-~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~ 436 (500)
+++++|.+ +++++++++++.+|+++|.+++++++||+|+++ +++|+||.+|++.....+ ...++.++|
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~im-- 109 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKSIL-- 109 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHHHC--
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHHHc--
Confidence 56777976 689999999999999999999999999999874 999999999998754332 246777754
Q ss_pred CCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 010821 437 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 495 (500)
Q Consensus 437 ~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl 495 (500)
. +++++.+++++.+|++.|.+++.+++||+|+ +|+++|+||+.||+
T Consensus 110 -----------~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 -----------R-PAVFVPEGKSLTALLKEFREQRNHMAIVIDE-YGGTSGLVTFEDII 155 (156)
T ss_dssp -----------B-CCCEEETTSBHHHHHHHHHHTTCCEEEEECT-TSSEEEEEEHHHHC
T ss_pred -----------C-CCEEECCCCCHHHHHHHHHhcCCeEEEEECC-CCCEEEEEEHHHhc
Confidence 3 4889999999999999999999999999995 79999999999986
No 56
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.63 E-value=4.7e-15 Score=142.25 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=105.1
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC--CcEEEEEeHHHHHHHHHcccccccC-------------
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN--DSLLDIYCRSDITALAKDKAYAHIN------------- 424 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~--g~lvGiis~~Di~~~~~~~~~~~~~------------- 424 (500)
+++++|.++++++.+++++.+|.++|.+++++.+||||++ ++++|+|+++||+.++.........
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 6788899999999999999999999999999999999974 6899999999999765432100000
Q ss_pred -----------------ccc---------------------------------------------------------ccH
Q 010821 425 -----------------LSE---------------------------------------------------------MTI 430 (500)
Q Consensus 425 -----------------~~~---------------------------------------------------------~~v 430 (500)
+.. .+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 000 000
Q ss_pred HHH-----HhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010821 431 HQA-----LQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 500 (500)
Q Consensus 431 ~~~-----l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~~ 500 (500)
.+. .......++...+|...++++.++++|.+|.++|...+++++||++ .|+|+||||+.||++++.+
T Consensus 174 ~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 000 0000001111125888999999999999999999999999999998 5999999999999999864
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=3e-15 Score=140.61 Aligned_cols=156 Identities=12% Similarity=0.168 Sum_probs=99.3
Q ss_pred CcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 272 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 272 g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+|+++.+. ..
T Consensus 16 ~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd---~~~---~l~Givt~~dl~~~~~-------------~~---- 72 (213)
T 1vr9_A 16 KKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKD---REG---HFRGVVNKEDLLDLDL-------------DS---- 72 (213)
T ss_dssp GGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEEC---TTS---BEEEEEEGGGGTTSCT-------------TS----
T ss_pred HHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---EEEEEEEHHHHHhhcC-------------CC----
Confidence 346788999999999999999999999999999993 345 7999999999874211 22
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHH
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIH 431 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~ 431 (500)
.++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++...... .+.
T Consensus 73 --------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~ 135 (213)
T 1vr9_A 73 --------SVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMD 135 (213)
T ss_dssp --------BSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C--
T ss_pred --------cHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCC
Confidence 245558888999999999999999999999999999998899999999999998654321 111
Q ss_pred HHHhcCCCCCCcccccCC-CceEeCCCCCHHHHHHHHhcCCCCEEEEEeC
Q 010821 432 QALQLGQDSYSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEA 480 (500)
Q Consensus 432 ~~l~~~~~~~~~~~im~~-~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~ 480 (500)
+.. .+ .+.+.....++.+|.+.|.+++++.++|++.
T Consensus 136 ~~~-------------~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 136 VPG-------------IRFSVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp --------------------------------------------------
T ss_pred CCc-------------EEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 111 00 1111233445999999999999999999863
No 58
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.62 E-value=4e-15 Score=134.78 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=101.1
Q ss_pred CCcccC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccc
Q 010821 271 HGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 348 (500)
Q Consensus 271 ~g~~~~--~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~ 348 (500)
++.+|. .+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+||++.+.... ..+
T Consensus 44 v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~----------~~~ 108 (172)
T 3lhh_A 44 ISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCR--NNVD---DMVGIISAKQLLSESIAGE----------RLE 108 (172)
T ss_dssp TTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHTTC----------CCC
T ss_pred HHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---eEEEEEEHHHHHHHHhhcC----------ccc
Confidence 445677 6789999999999999999999999999993 3325 7999999999998765320 223
Q ss_pred cccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 349 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 349 v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
++++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+...
T Consensus 109 ------------v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 109 ------------LVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp ------------GGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred ------------HHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 34458 7899999999999999999999999999999999999999999999866543
No 59
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.62 E-value=1.1e-15 Score=143.69 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=103.9
Q ss_pred ccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHh
Q 010821 356 TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 435 (500)
Q Consensus 356 ~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~ 435 (500)
+|.++++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+..... ..++.+
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~--- 76 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFN--- 76 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGG---
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHH---
Confidence 4555677789999999999999999999999999999999998899999999999975321 245555
Q ss_pred cCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 436 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 436 ~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.++++++.+++++.+|+++|.+++++++||+|+ +|+++|+||.+||++.+.
T Consensus 77 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 77 ----------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp ----------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ----------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 55778999999999999999999999999999995 699999999999998763
No 60
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.61 E-value=6.9e-15 Score=129.54 Aligned_cols=118 Identities=12% Similarity=0.157 Sum_probs=99.9
Q ss_pred CcccCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccc
Q 010821 272 GKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 349 (500)
Q Consensus 272 g~~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v 349 (500)
+.+|.+ +++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++.+.... ..+
T Consensus 26 ~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~----------~~~- 89 (148)
T 3lv9_A 26 REIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCR--KNKD---DILGFVHIRDLYNQKINEN----------KIE- 89 (148)
T ss_dssp GGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS----------CCC-
T ss_pred HHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhcCC----------Ccc-
Confidence 345666 899999999999999999999999999993 3325 7999999999998765431 122
Q ss_pred ccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 350 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 350 ~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
++++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+..
T Consensus 90 -----------v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 90 -----------LEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp -----------GGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred -----------HHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 34458 788999999999999999999999999999999999999999999986543
No 61
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.61 E-value=2e-15 Score=137.95 Aligned_cols=125 Identities=13% Similarity=0.236 Sum_probs=101.7
Q ss_pred ccCCCCCCC----ceEe--cCCCCHHHHHHHHHHCCCCEEEEE--cCCCcEEEEEeHHHHHHHHHccccccc--------
Q 010821 360 KIGEPNRRP----LAML--RPSASLSAALNLLVQAQVSSIPIV--DDNDSLLDIYCRSDITALAKDKAYAHI-------- 423 (500)
Q Consensus 360 ~v~d~m~~~----~~~v--~~~~~l~ea~~~m~~~~~~~lpVv--d~~g~lvGiis~~Di~~~~~~~~~~~~-------- 423 (500)
+++++|.+. ++++ .+++++.+|+++|.+++++.+||+ |++|+++|+||..|++...........
T Consensus 12 ~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 12 LAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp BHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred cHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 345558765 7788 999999999999999999999999 788999999999999986543210000
Q ss_pred ------------CcccccHHHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEeh
Q 010821 424 ------------NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSL 491 (500)
Q Consensus 424 ------------~~~~~~v~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~ 491 (500)
.....++.+ +|.+++++|.+++++.+|+++|.+++.+++||+| +|+++|+||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~-------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~ 156 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRN-------------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITK 156 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGG-------------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEH
T ss_pred ecccCCcccccccccCccHHH-------------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEH
Confidence 011223333 5678899999999999999999999999999999 5999999999
Q ss_pred HHHHHHhh
Q 010821 492 SDIFKFLL 499 (500)
Q Consensus 492 ~DIl~~l~ 499 (500)
+||++++.
T Consensus 157 ~dll~~l~ 164 (185)
T 2j9l_A 157 KDVLKHIA 164 (185)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 62
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.59 E-value=4.7e-15 Score=132.25 Aligned_cols=119 Identities=16% Similarity=0.208 Sum_probs=97.1
Q ss_pred CCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccccc
Q 010821 276 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 355 (500)
Q Consensus 276 ~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~ 355 (500)
..+++++.+++|+.+|+++|.+++++++||++ +++ +++|++|.+|+++++....... ......
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd---~~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~-------- 86 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADT-------- 86 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTS--------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc---CCC---cEEEEEEecchhhhhhhccccc---cccccc--------
Confidence 35799999999999999999999999999993 345 7999999999998876542110 011122
Q ss_pred ccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 356 TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 356 ~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.+++.++.+++++.+|+++|.+++ .+||+|++|+++|+||.+||++.+..
T Consensus 87 ----~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 87 ----DIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp ----BGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----CHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 345559999999999999999999998765 49999999999999999999986643
No 63
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.59 E-value=2.5e-15 Score=135.82 Aligned_cols=134 Identities=20% Similarity=0.330 Sum_probs=100.3
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccc---
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI--- 349 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v--- 349 (500)
.+|.++++++.+++|+.+|+++|.+++++++||++ ++| +++|++|.+||++.+........ ...+...+
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd---~~g---~lvGiit~~Dll~~~~~~~~~~~--~~~~~~~~~~~ 93 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVD---QNG---HLVGIITESDFLRGSIPFWIYEA--SEILSRAIPAP 93 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEEC---TTS---CEEEEEEGGGGGGGTCCTTHHHH--HHHHTTTSCHH
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEc---CCc---cEEEEEEHHHHHHHHhhccccch--hhhhhhccchh
Confidence 46899999999999999999999999999999993 456 79999999999865432110000 00000000
Q ss_pred --ccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 350 --CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 350 --~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
..+.-.....+++++|+++++++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++
T Consensus 94 ~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 94 EVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred hHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 000000001145666999999999999999999999999999999998 69999999999998754
No 64
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.58 E-value=1.3e-14 Score=123.14 Aligned_cols=115 Identities=21% Similarity=0.355 Sum_probs=99.0
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|.++++++.+++++.+|++.|.+++++.+||++ +++ +++|+++..|+++++... ..++
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~-----------~~~v---- 64 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVD---EHG---KLVGIITSWDIAKALAQN-----------KKTI---- 64 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEEC---TTS---BEEEEECHHHHHHHHHTT-----------CCBG----
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---CEEEEEEHHHHHHHHHhc-----------ccCH----
Confidence 4677899999999999999999999999999993 346 799999999999876532 1123
Q ss_pred ccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 354 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 354 i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 65 --------~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 65 --------EEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp --------GGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred --------HHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 44487889999999999999999999999999999988999999999999986543
No 65
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.57 E-value=1.4e-14 Score=124.72 Aligned_cols=116 Identities=10% Similarity=0.134 Sum_probs=96.4
Q ss_pred cccC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccc
Q 010821 273 KAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 350 (500)
Q Consensus 273 ~~~~--~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~ 350 (500)
.+|. .+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++++.... ...++.
T Consensus 10 ~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~~~---------~~~~v~ 75 (130)
T 3i8n_A 10 QVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYS--EQKD---NIIGFVHRLELFKMQQSGS---------GQKQLG 75 (130)
T ss_dssp TTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEES--SSTT---CEEEECCHHHHHHHHHTTT---------TTSBHH
T ss_pred hCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---cEEEEEEHHHHHHHHhcCC---------CcCCHH
Confidence 3565 4577999999999999999999999999993 3335 7999999999998765321 122333
Q ss_pred cccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 351 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 351 ~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
+ +| +++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+
T Consensus 76 ~------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 76 A------------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp H------------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred H------------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 3 37 3578999999999999999999999999999999999999999999854
No 66
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.57 E-value=2.4e-14 Score=123.39 Aligned_cols=118 Identities=22% Similarity=0.345 Sum_probs=100.5
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.++++++.+++++.+|+++|.+++++.+||++ ++ +++|++|.+|+++++..... ...
T Consensus 8 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~----- 67 (133)
T 2ef7_A 8 EYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LET----- 67 (133)
T ss_dssp GTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTC-----
T ss_pred HhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------ccc-----
Confidence 35777899999999999999999999999999993 46 79999999999987654211 122
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++...+
T Consensus 68 -------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 68 -------KAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp -------BGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred -------CHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 3345587789999999999999999999999999999989999999999999986654
No 67
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.56 E-value=9.2e-15 Score=125.41 Aligned_cols=118 Identities=19% Similarity=0.259 Sum_probs=99.4
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.+++.++.+++++.+|+++|.+++++.+||++ + + +++|++|.+||++.+.... ....
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~-~---~~~Givt~~dl~~~~~~~~--------~~~~----- 68 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLD---G-E---RYLGMVHLSRLLEGRKGWP--------TVKE----- 68 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHTTCSSSC--------CTTC-----
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE---C-C---EEEEEEEHHHHHHHHhhCC--------cccC-----
Confidence 35788899999999999999999999999999994 3 6 8999999999986432110 0011
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 69 -------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 69 -------KLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp -------BCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred -------cHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 3455588889999999999999999999999999999999999999999999986643
No 68
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=1.7e-14 Score=124.35 Aligned_cols=116 Identities=12% Similarity=0.138 Sum_probs=95.7
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++.+++++.+|+++|.+++++++||++ ++++ +++|++|.+|+++++.... .....++.
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~--~~~~---~lvGivt~~dl~~~~~~~~-------~~~~~~v~------ 73 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYR--DSLD---DAISMLRVREAYRLMTEKK-------EFTKEIML------ 73 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEES--SSGG---GEEEEEEHHHHHHHHTSSS-------CCCHHHHH------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEc--CCCC---cEEEEEEHHHHHHHHhccC-------ccchhhHH------
Confidence 4688999999999999999999999999993 3345 7999999999998765321 00112233
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+..
T Consensus 74 ------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 74 ------RAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ------HHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred ------Hhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 336 567899999999999999999999999999999999999999999986543
No 69
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.56 E-value=2.9e-14 Score=126.95 Aligned_cols=115 Identities=15% Similarity=0.194 Sum_probs=94.7
Q ss_pred CCCcccCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccc
Q 010821 270 SHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL 347 (500)
Q Consensus 270 ~~g~~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~ 347 (500)
.++.+|.+ +++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++++... ...
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~----------~~~ 103 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIG--EDKD---EVLGILHAKDLLKYMFNP----------EQF 103 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGSSCG----------GGC
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHcC----------Ccc
Confidence 34556765 789999999999999999999999999993 3334 699999999998643211 122
Q ss_pred ccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH
Q 010821 348 PICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 412 (500)
Q Consensus 348 ~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~ 412 (500)
++. ++|.+ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|++
T Consensus 104 ~v~------------~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 HLK------------SILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CHH------------HHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cHH------------HHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 333 33754 88999999999999999999999999999999999999999985
No 70
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.55 E-value=1.2e-14 Score=126.34 Aligned_cols=113 Identities=9% Similarity=0.119 Sum_probs=93.9
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+||++++... .....+
T Consensus 13 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~--------~~~~~~-------- 71 (136)
T 3lfr_A 13 SQMISIKATQTPREFLPAVIDAAHSRYPVIG--ESHD---DVLGVLLAKDLLPLILKA--------DGDSDD-------- 71 (136)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGGSS--------SGGGCC--------
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHhc--------cCCCcC--------
Confidence 5689999999999999999999999999993 3325 799999999998754321 011222
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
++++|.+ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+
T Consensus 72 ----v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 72 ----VKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp ----GGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC
T ss_pred ----HHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 3444755 88999999999999999999999999999999999999999999743
No 71
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.55 E-value=1.8e-14 Score=123.88 Aligned_cols=111 Identities=12% Similarity=0.190 Sum_probs=92.3
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++++.. ...++
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~-----------~~~~v------- 71 (129)
T 3jtf_A 15 SRMDLLDISQPLPQLLATIIETAHSRFPVYE--DDRD---NIIGILLAKDLLRYMLE-----------PALDI------- 71 (129)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSCCSEEEEES--SSTT---CEEEEEEGGGGGGGGTC-----------TTSCG-------
T ss_pred HHeEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCC---cEEEEEEHHHHHhHhcc-----------CCcCH-------
Confidence 5688999999999999999999999999993 3335 79999999999864321 01223
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 416 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~ 416 (500)
+++|. +++++.+++++.+|+++|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 72 -----~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 72 -----RSLVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp -----GGGCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred -----HHHhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 34464 4789999999999999999999999999999899999999999998654
No 72
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.55 E-value=2.6e-14 Score=121.62 Aligned_cols=117 Identities=17% Similarity=0.272 Sum_probs=98.4
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|.++++++.+++++.+|+++|.+++++.+||++ ++ +++|++|.+|+++++..... ....++.
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~~v~--- 68 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEVKVW--- 68 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTSBHH---
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccccCHH---
Confidence 4677899999999999999999999999999993 46 89999999999987654311 1123333
Q ss_pred ccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 354 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 354 i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
++|.+++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|+++.+..
T Consensus 69 ---------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 69 ---------EVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ---------HHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred ---------HHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 347778999999999999999999999999999997 999999999999986544
No 73
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.55 E-value=8.1e-14 Score=126.41 Aligned_cols=121 Identities=7% Similarity=0.119 Sum_probs=99.7
Q ss_pred CCCCcccC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccc
Q 010821 269 DSHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILK 346 (500)
Q Consensus 269 ~~~g~~~~--~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~ 346 (500)
..++.+|. ++++++.+++++.+|+++|.+++++++||++ .+.+ +++|+||.+||++++.... .
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~Dl~~~~~~~~----------~ 100 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR--GSLD---EVVGIGRAKDLVADLITEG----------R 100 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS----------S
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---CEEEEEEHHHHHHHHhcCC----------c
Confidence 34455675 4689999999999999999999999999993 3335 7999999999998765321 1
Q ss_pred cccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 347 LPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 347 ~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
.++ + |.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..||+..+...
T Consensus 101 ~~v------------~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 101 VRR------------N--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp CCG------------G--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred chh------------H--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 122 2 235678999999999999999999999999999999999999999999876654
No 74
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.55 E-value=9e-15 Score=143.66 Aligned_cols=116 Identities=15% Similarity=0.240 Sum_probs=102.6
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHH
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 434 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 434 (500)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++.. ....++.++|
T Consensus 138 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~----------~~~~~v~~im 207 (286)
T 2oux_A 138 TAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN----------DDDTLIADIL 207 (286)
T ss_dssp BHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS----------CTTSBHHHHS
T ss_pred HHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC----------CCCCcHHHHc
Confidence 44555988999999999999999999987 88999999999999999999999753 1246788754
Q ss_pred hcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 435 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 435 ~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+++++|++++++.+|++.|.+++.+++||||+ +|+++|+||..||++.+.
T Consensus 208 -------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 208 -------------NERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp -------------BSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred -------------CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 678999999999999999999999999999995 799999999999998764
No 75
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.54 E-value=2.3e-14 Score=127.01 Aligned_cols=117 Identities=10% Similarity=0.125 Sum_probs=99.0
Q ss_pred ccCC--CceecCCCCcHHHHHHHHHhcCCceeeEE-ecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccc
Q 010821 274 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPII-HSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 350 (500)
Q Consensus 274 ~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv-~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~ 350 (500)
+|.+ +++++.+++++.+|+++|.+++++++||+ + .+.+ +++|++|.+||++++.... ..+
T Consensus 25 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d--~~~~---~lvGivt~~dl~~~~~~~~----------~~~-- 87 (153)
T 3oco_A 25 VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTAD--NDKD---KIIGYAYNYDIVRQARIDD----------KAK-- 87 (153)
T ss_dssp HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEET--TEEE---EEEEEEEHHHHHHHHHHHT----------TSB--
T ss_pred EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEEC--CCCC---cEEEEEEHHHHHhHHhcCC----------CCc--
Confidence 3554 78999999999999999999999999999 3 1235 7999999999998776431 122
Q ss_pred cccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 351 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 351 ~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
++++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+...
T Consensus 88 ----------v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 88 ----------ISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp ----------GGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred ----------HHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 34458 7899999999999999999999999999999999999999999999876543
No 76
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.54 E-value=1.7e-14 Score=123.59 Aligned_cols=111 Identities=13% Similarity=0.163 Sum_probs=92.2
Q ss_pred CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccccccc
Q 010821 278 PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTW 357 (500)
Q Consensus 278 ~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~ 357 (500)
+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++.+.... ...++.
T Consensus 14 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~~---------~~~~v~------- 72 (127)
T 3nqr_A 14 QMITLKRNQTLDECLDVIIESAHSRFPVIS--EDKD---HIEGILMAKDLLPFMRSDA---------EAFSMD------- 72 (127)
T ss_dssp GCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGSTTC---------CCCCHH-------
T ss_pred HeEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhccC---------CCCCHH-------
Confidence 488999999999999999999999999993 3325 7999999999986543210 122333
Q ss_pred CcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 358 VPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 358 ~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+
T Consensus 73 -----~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 73 -----KVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp -----HHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred -----HHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 33744 67899999999999999999999999999999999999999998753
No 77
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.54 E-value=1.9e-14 Score=140.79 Aligned_cols=116 Identities=17% Similarity=0.280 Sum_probs=101.2
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHH
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 434 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 434 (500)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... ...++.+
T Consensus 136 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~-- 203 (278)
T 2yvy_A 136 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE-- 203 (278)
T ss_dssp BGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTT--
T ss_pred hHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHH--
Confidence 34566988999999999999999999986 789999999999999999999997531 1345555
Q ss_pred hcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 435 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 435 ~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+++++|++++++.+|++.|.+++.+.+||||+ +|+++|+||..||++.+.
T Consensus 204 -----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 204 -----------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp -----------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC-
T ss_pred -----------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 55778999999999999999999999999999995 799999999999998864
No 78
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.54 E-value=5.7e-15 Score=162.38 Aligned_cols=81 Identities=15% Similarity=0.265 Sum_probs=67.9
Q ss_pred CCceeeEEEE--ecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEe--eCCCCC---e
Q 010821 22 DTVLIPMRFV--WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR--HDEHQP---F 93 (500)
Q Consensus 22 ~~~~~~~~f~--~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~--~d~~~~---~ 93 (500)
....++|+|+ |+.+|++|+|+||||+|++. .+|.+ .+|.|++++.||||+|+|||+|||+|+ +||++| +
T Consensus 14 ~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~---~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y 90 (696)
T 4aee_A 14 RKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK---IEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKC 90 (696)
T ss_dssp EEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE---ETTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEEE
T ss_pred CCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe---cCCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCcccc
Confidence 3345566666 55589999999999999875 57765 379999999999999999999999999 788887 5
Q ss_pred eeCCCCCeeeEE
Q 010821 94 ISSEYGIVNTVL 105 (500)
Q Consensus 94 ~~~~~g~~nn~l 105 (500)
+.|++|+.|++.
T Consensus 91 ~~~~~g~~n~~~ 102 (696)
T 4aee_A 91 VHTSFFPEYKKC 102 (696)
T ss_dssp EECSSCTTSEEE
T ss_pred cccCCcccccee
Confidence 889999999985
No 79
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.54 E-value=6.8e-14 Score=121.98 Aligned_cols=117 Identities=17% Similarity=0.283 Sum_probs=97.6
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.++++++.+++++.+|+++|.+++++++||++ ++. ..+++|++|.+|+++++..... ...+
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~--~~~~~Givt~~dl~~~~~~~~~--------~~~~---- 72 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTA--RDN--PKRPVAVVSERDILRAVAQRLD--------LDGP---- 72 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEE--TTE--EEEEEEEEEHHHHHHHHHTTCC--------TTSB----
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEc--CCC--cceeEEEEEHHHHHHHHhcCCC--------CCCC----
Confidence 35778899999999999999999999999999994 221 0159999999999987653211 1223
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHH
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITAL 414 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~ 414 (500)
++++|.++++++.++ ++.+|+++|.+++++.+||+|++|+++|+||.+||++.
T Consensus 73 --------v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 73 --------AMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFE 125 (141)
T ss_dssp --------SGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSC
T ss_pred --------HHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHH
Confidence 344588899999999 99999999999999999999989999999999999864
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.53 E-value=9.5e-14 Score=122.34 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=97.0
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++.+++++.+|+++|.+++++++||++ +++ +++|++|..||++++....... .......
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~--~~~~~~~--------- 87 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLD---PMY---KLHGLISTAMILDGILGLERIE--FERLEEM--------- 87 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHTBCSSSBC--GGGGGGC---------
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEEC---CCC---CEEEEEEHHHHHHHHHhhcccc--hhHHhcC---------
Confidence 4689999999999999999999999999993 346 7999999999998764321100 0001112
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+++++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||..||++.+...
T Consensus 88 ---~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 88 ---KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp ---BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ---CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 3456688899999999999999999999886 99999999999999999999876543
No 81
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=5.6e-14 Score=121.81 Aligned_cols=119 Identities=18% Similarity=0.394 Sum_probs=98.3
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhH-HHHHHhhcccCCCCcccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGI-LKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dI-l~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
.+|.++++++.+++++.+|+++|.+++++.+||++ +++ +++|++|..|+ ++++.... ....++
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~--------~~~~~v-- 75 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID---DEN---KVIGIVTTTDIGYNLIRDKY--------TLETTI-- 75 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC---TTC---BEEEEEEHHHHHHHHTTTCC--------CSSCBH--
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC---CCC---eEEEEEEHHHHHHHHHhhcc--------cCCcCH--
Confidence 35777899999999999999999999999999993 346 79999999999 87654211 112333
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCC-----CCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQ-----VSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~-----~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++|.+++.++.+++++.+|++.|.+++ ++.+||+|++|+++|+||..|+++...+
T Consensus 76 ----------~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 76 ----------GDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp ----------HHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----------HHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 3448788999999999999999999999 9999999989999999999999986543
No 82
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.53 E-value=6.9e-14 Score=124.93 Aligned_cols=126 Identities=18% Similarity=0.260 Sum_probs=100.9
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCC-Ccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS-SLPILKLPICA 351 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~-~~~~l~~~v~~ 351 (500)
.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+||++++...+..... .......
T Consensus 9 dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~---- 78 (160)
T 2o16_A 9 DMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD---ANK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFET---- 78 (160)
T ss_dssp GTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHHHCC---------CCC----
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHHHhhcccccccchhccc----
Confidence 35777899999999999999999999999999993 346 799999999999887654321000 0001122
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.++++++.+++++.+|+++|.+++++.+||+|+ |+++|+||..||++....
T Consensus 79 --------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 79 --------PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp --------BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred --------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 344558889999999999999999999999999999997 999999999999986543
No 83
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.51 E-value=1.3e-13 Score=119.62 Aligned_cols=121 Identities=15% Similarity=0.303 Sum_probs=99.5
Q ss_pred CcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 272 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 272 g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+.+|.++++++.+++++.+|++.|.+++++.+||++ +++ +++|++|..|+++.+.... .....
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~---- 72 (138)
T 2yzi_A 10 KVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN---DDG---NVVGFFTKSDIIRRVIVPG-------LPYDI---- 72 (138)
T ss_dssp GGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHTTTTC-------CCTTS----
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHHhcC-------CcccC----
Confidence 345778899999999999999999999999999993 345 7999999999984332110 01122
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+++++|.+++.++.+++++.+|+++|.+++++.+ |+|++|+++|+||..|+++.....
T Consensus 73 --------~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 73 --------PVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp --------BGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred --------CHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 3455588889999999999999999999999999 999889999999999999876654
No 84
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.8e-13 Score=122.85 Aligned_cols=116 Identities=15% Similarity=0.275 Sum_probs=98.4
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
.+++++.+++++.+|+++|.+++++.+||++ +++ +++|++|.+||++++...... ....+
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~~------~~~~~-------- 94 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTD---ADG---VVLGIFTERDLVKAVAGQGAA------SLQQS-------- 94 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHHHHGGG------GGTSB--------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---eEEEEEEHHHHHHHHHhcCCc------cccCC--------
Confidence 3688999999999999999999999999993 345 799999999999887754211 11233
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
++++|.++++++.+++++.+|+++|.+++++.+||+|+ |+++|+||..||++....
T Consensus 95 ----v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 95 ----VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ----GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred ----HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 34558888999999999999999999999999999998 999999999999987544
No 85
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.51 E-value=1e-13 Score=123.65 Aligned_cols=119 Identities=15% Similarity=0.258 Sum_probs=98.0
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.+ ++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+||++++.... .....+
T Consensus 21 ~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~---- 82 (159)
T 3fv6_A 21 DFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVD---RDA---VLVGVLSRKDLLRASIGQQ-------ELTSVP---- 82 (159)
T ss_dssp GSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHTSCS-------CTTTCB----
T ss_pred HHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---cEEEEEeHHHHHHHhhccC-------cccCcC----
Confidence 34666 45999999999999999999999999993 345 7999999999998764211 111223
Q ss_pred cccccCcccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCC---cEEEEEeHHHHHHHHHc
Q 010821 353 PVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND---SLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g---~lvGiis~~Di~~~~~~ 417 (500)
++++|.+ +++++.+++++.+|+++|.+++++.+||+|++| +++|+||..||++.+.+
T Consensus 83 --------v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 83 --------VHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp --------GGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred --------HHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 3455877 889999999999999999999999999999888 99999999999986543
No 86
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.50 E-value=1.2e-13 Score=119.32 Aligned_cols=115 Identities=16% Similarity=0.325 Sum_probs=96.4
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
++++++.+++++.+|++.|.+++++++||++ ++ +++|++|..||++.+..... .....
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~~--------- 74 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKDT--------- 74 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGGS---------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------CcccC---------
Confidence 6789999999999999999999999999993 46 79999999999865432110 01122
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|+||.+|+++...+
T Consensus 75 ---~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 75 ---QVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ---BGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ---CHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 34555888999999999999999999999999999999 7999999999999986644
No 87
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.50 E-value=1.2e-13 Score=135.69 Aligned_cols=169 Identities=15% Similarity=0.174 Sum_probs=123.3
Q ss_pred CeEEEEeeHHHHHHHHHHhcCC---------CCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHH
Q 010821 219 ARFVGVLSASDFILILRELGNH---------GSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLK 289 (500)
Q Consensus 219 ~~~vGilt~~Dii~il~~~~~~---------~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~ 289 (500)
..++.-++..|+++++..+... +.....+.+..+.......+...+.++...+|.+|.++++++.+++++.
T Consensus 78 ~~ll~~l~~d~~~~ll~~l~~d~~~~ll~~l~~~~~~~i~~~l~~~e~~~i~~ll~~~~~~v~~iM~~~~~~v~~~~tv~ 157 (286)
T 2oux_A 78 KDYLAEMRPSYAADMLAEMYTDNAVDLLNMLDKSQKAKYLSLLSSEEAGEIKELLHYEDETAGAIMTTEFVSIVANQTVR 157 (286)
T ss_dssp THHHHHSCHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHTSCHHHHHHHHHHTTSCTTBHHHHCBSCCCEECSSSBHH
T ss_pred HHHHHhCCHHHHHHHHHhCCHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHHHhcCChHHHHHhCCCCceEECCCCcHH
Confidence 4556666666766666544210 0000011122233333333444455666667788999999999999999
Q ss_pred HHHHHHHhc-----CCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCC
Q 010821 290 DVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEP 364 (500)
Q Consensus 290 ~a~~~m~~~-----~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~ 364 (500)
+|++.|.++ +++++||++ +++ +++|++|.+|++.. ....++ +++
T Consensus 158 ea~~~~~~~~~~~~~~~~~pVvd---~~~---~lvGivt~~dll~~-------------~~~~~v------------~~i 206 (286)
T 2oux_A 158 SAMYVLKNQADMAETIYYVYVVD---QEN---HLVGVISLRDLIVN-------------DDDTLI------------ADI 206 (286)
T ss_dssp HHHHHHHHHCSSCSCCSEEEEEC---TTC---BEEEEEEHHHHTTS-------------CTTSBH------------HHH
T ss_pred HHHHHHHHcccCccceeEEEEEc---CCC---eEEEEEEHHHHHcC-------------CCCCcH------------HHH
Confidence 999999997 888999993 345 79999999999742 012334 344
Q ss_pred CCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 365 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 365 m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
|.++++++++++++.+|+++|.+++++.+||+|++|+++|+||..|++..+...
T Consensus 207 m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 207 LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999999999999876543
No 88
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.50 E-value=1.6e-13 Score=119.65 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=96.0
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|..|+++++..... .....++.++
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~- 82 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID---ENG---YLINVYEAYDVLGLIKGGIY------NDLSLSVGEA- 82 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHTC----------CCSBHHHH-
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc---CCC---cEEEEEcHHHHHHHhccccc------ccCCccHHHH-
Confidence 4667899999999999999999999999999993 346 79999999999987653210 1112333332
Q ss_pred ccccCcccCCCCCC------CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q 010821 354 VGTWVPKIGEPNRR------PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 416 (500)
Q Consensus 354 i~~~~~~v~d~m~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~ 416 (500)
|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 83 -----------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 83 -----------LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -----------HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -----------HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 543 5789999999999999999999999999998899999999999998654
No 89
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.50 E-value=8.3e-14 Score=122.53 Aligned_cols=132 Identities=16% Similarity=0.258 Sum_probs=98.2
Q ss_pred ccCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 274 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 274 ~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+|.+ +++++.+++++.+|+++|.+++++++||++ +++ +++|++|..||++++...... ..+.. ...
T Consensus 10 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~~-~~~ 77 (152)
T 4gqw_A 10 FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVID---EDW---KLVGLVSDYDLLALDSGDSTW-----KTFNA-VQK 77 (152)
T ss_dssp TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHTTCC----CC-----HHHHH-HHT
T ss_pred ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEe---CCC---eEEEEEEHHHHHHhhcccCcc-----cchHH-HHH
Confidence 4655 799999999999999999999999999993 345 799999999998643211100 00000 000
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
........+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++.+..
T Consensus 78 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 78 LLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp C-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 000001113455588888999999999999999999999999999999999999999999987654
No 90
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.50 E-value=2.6e-13 Score=120.67 Aligned_cols=133 Identities=14% Similarity=0.196 Sum_probs=100.2
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCce-eeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVAT-VPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~-lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
.+|.++++++.+++++.+|+++|.+++++. +||++ . + +++|++|..||++++...+.........+.....
T Consensus 20 ~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd--~--~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~- 91 (157)
T 1o50_A 20 KLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVAR--D--N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK- 91 (157)
T ss_dssp TSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEE--T--T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCC-
T ss_pred hcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEE--C--C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH-
Confidence 358889999999999999999999999999 99994 2 2 5999999999998765321000000000000000
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
.....+++++|.+ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+.+
T Consensus 92 ---~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 92 ---RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp ---CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ---HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 0011244566888 9999999999999999999999999999988999999999999986654
No 91
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.49 E-value=1.2e-13 Score=121.73 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=96.6
Q ss_pred cccCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccc
Q 010821 273 KAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 350 (500)
Q Consensus 273 ~~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~ 350 (500)
.+|.+ +++++.+++++.+|+++|.+++++.+||++ +++ +++|++|..||++++.... .....++.
T Consensus 32 dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~ 98 (149)
T 3k2v_A 32 DIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD---DDM---NIIGIFTDGDLRRVFDTGV-------DMRDASIA 98 (149)
T ss_dssp GTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC---TTC---BEEEEEEHHHHHHHHCSSS-------CCTTCBHH
T ss_pred HHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---cEEEEecHHHHHHHHhcCC-------CcccCcHH
Confidence 35777 899999999999999999999999999993 346 7999999999998765321 11233444
Q ss_pred cccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHH
Q 010821 351 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 413 (500)
Q Consensus 351 ~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~ 413 (500)
+ +|.++++++.+++++.+|+++|.+++++.+||+|++ +++|+||..||++
T Consensus 99 ~------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 99 D------------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp H------------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred H------------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 3 487888999999999999999999999999999965 9999999999863
No 92
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.49 E-value=2.5e-13 Score=120.05 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=95.7
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
++++++.+++++.+|+++|.+++++.+||++ +++ +++|++|..||++++..... .....++
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd---~~~---~~vGivt~~dl~~~~~~~~~------~~~~~~v------- 89 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVD---EKG---RVVDIYSKFDVINLAAEKTY------NNLDVSV------- 89 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTS---BEEEEEEHHHHHHHHHCSSC------CCTTSBG-------
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEEC---CCC---cEEEEEeHHHHHHHhcchhh------hhhcchH-------
Confidence 6788999999999999999999999999993 346 79999999999987653210 0112233
Q ss_pred cCcccCCCCC------CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 357 WVPKIGEPNR------RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 357 ~~~~v~d~m~------~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
.++|. ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+
T Consensus 90 -----~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 90 -----TKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp -----GGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred -----HHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 33354 6789999999999999999999999999999889999999999998864
No 93
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.49 E-value=1.9e-13 Score=133.58 Aligned_cols=134 Identities=15% Similarity=0.238 Sum_probs=110.2
Q ss_pred chhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhc-----CCceeeEEecCCCCCCCceEEEEEehhhH
Q 010821 253 TISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGI 327 (500)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~-----~i~~lpVv~~d~~~~~~~~liGivs~~dI 327 (500)
.......+...+.++...+|.+|.++++++.+++++.+|++.|.++ +++++||++ +++ +++|++|.+|+
T Consensus 119 ~~~~~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd---~~~---~lvGivt~~dl 192 (278)
T 2yvy_A 119 DPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD---EKG---RLKGVLSLRDL 192 (278)
T ss_dssp CHHHHHHHHHHHHSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEEC---TTC---BEEEEEEHHHH
T ss_pred CHHHHHHHHHHHCCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEEC---CCC---CEEEEEEHHHH
Confidence 3344445555566777777889999999999999999999999987 789999993 345 79999999999
Q ss_pred HHHHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEe
Q 010821 328 LKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYC 407 (500)
Q Consensus 328 l~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis 407 (500)
+.. .... +++++|.++++++++++++.+|+++|.+++.+.+||+|++|+++|+||
T Consensus 193 l~~-------------~~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT 247 (278)
T 2yvy_A 193 IVA-------------DPRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVT 247 (278)
T ss_dssp HHS-------------CTTC------------BSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEE
T ss_pred hcC-------------CCCC------------cHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEE
Confidence 842 0112 345668888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 010821 408 RSDITALAKD 417 (500)
Q Consensus 408 ~~Di~~~~~~ 417 (500)
..|++..+..
T Consensus 248 ~~Dil~~i~~ 257 (278)
T 2yvy_A 248 VDDVLDVLEA 257 (278)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHHH
Confidence 9999986544
No 94
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.48 E-value=3.6e-13 Score=119.44 Aligned_cols=124 Identities=15% Similarity=0.245 Sum_probs=98.6
Q ss_pred cccCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccc
Q 010821 273 KAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 350 (500)
Q Consensus 273 ~~~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~ 350 (500)
.+|.+ +++++.+++++.+|+++|.+++++++||++ +++ +++|++|..|+++++...... ........
T Consensus 15 ~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~--~~~~~~~~--- 83 (157)
T 2emq_A 15 PFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD---TSY---KLHGLISMTMMMDAILGLERI--EFERLETM--- 83 (157)
T ss_dssp TTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC---TTC---CEEEEEEHHHHHHHSBCSSSB--CGGGGGTC---
T ss_pred hhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc---CCC---CEEEEeeHHHHHHHHhccccc--chHHhcCC---
Confidence 35664 789999999999999999999999999993 345 799999999999765421000 00000111
Q ss_pred cccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 351 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 351 ~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+++++|.++++++.+++++.+|+++|.++++ +||+|++|+++|+||.+|+++.....
T Consensus 84 ---------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 84 ---------KVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp ---------BGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred ---------cHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 4456688899999999999999999999987 99999889999999999999876543
No 95
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.47 E-value=1.4e-13 Score=122.24 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=98.2
Q ss_pred ccC--CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 274 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 274 ~~~--~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+|. ++++++.+++++.+|+++|.+++++++||++ +++ +++|++|..||++++....... ......
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~---- 86 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADT---- 86 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTS----
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC---CCC---EEEEEEcHHHHHHHHHhccccc---cccccC----
Confidence 455 6789999999999999999999999999993 346 7999999999998876531110 001122
Q ss_pred ccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 352 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+++++|.++++++.+++++.+|+++|.+++ .+||+|++|+++|+||.+|+++.....
T Consensus 87 --------~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 87 --------DIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp --------BGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred --------cHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 334558888999999999999999998876 799999999999999999999876553
No 96
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.47 E-value=3.4e-13 Score=123.29 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=99.5
Q ss_pred cccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 273 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 273 ~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+||++++..... .....
T Consensus 13 ~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd---~~g---~~vGivt~~dl~~~~~~~~~------~~~~~----- 75 (184)
T 1pvm_A 13 KIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKD---DNG---NDVGLLSERSIIKRFIPRNK------KPDEV----- 75 (184)
T ss_dssp GTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHHHTGGGCC------CGGGS-----
T ss_pred HhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHhhccc------CcccC-----
Confidence 35778899999999999999999999999999993 345 79999999999986643200 01112
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..||++.+
T Consensus 76 -------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 76 -------PIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp -------BGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTS
T ss_pred -------CHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 34555888899999999999999999999999999999889999999999998754
No 97
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=1.3e-13 Score=146.81 Aligned_cols=121 Identities=17% Similarity=0.235 Sum_probs=103.7
Q ss_pred ccCCCCCCCceEecCC-CCHHHHHHHHHHCCCCEEEEEc-CCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcC
Q 010821 360 KIGEPNRRPLAMLRPS-ASLSAALNLLVQAQVSSIPIVD-DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 437 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~-~~l~ea~~~m~~~~~~~lpVvd-~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 437 (500)
+|+++|.++++++.++ +++.+|+++|.+++++++||+| ++++++|+||.+||++.+..+.. ....+|.+
T Consensus 385 ~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~----~~~~~V~~----- 455 (527)
T 3pc3_A 385 AIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR----QQSDPAIK----- 455 (527)
T ss_dssp BGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC----CTTSBGGG-----
T ss_pred cHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC----cCCCcHHH-----
Confidence 6788899999999999 9999999999999999999999 78999999999999976544311 22466776
Q ss_pred CCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCC---CCeEEEEEehHHHHHHhh
Q 010821 438 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAG---SKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 438 ~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~---~g~liGiIS~~DIl~~l~ 499 (500)
+|.++++++.+++++.+|+++|.++++ +||||++ .|+++||||+.||++++.
T Consensus 456 --------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 456 --------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp --------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHH
T ss_pred --------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHH
Confidence 557899999999999999999987765 7999952 289999999999999875
No 98
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.47 E-value=3.1e-13 Score=120.66 Aligned_cols=123 Identities=13% Similarity=0.157 Sum_probs=96.3
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCC-CCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS-QDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~-~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
+|.++++++.+++++.+|+++|.+++++++||++ + +++ +++|++|..||++++....... ......++.++
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd--~~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~ 89 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE--STESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDI 89 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES--CTTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHH
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe--cCCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhh
Confidence 3677899999999999999999999999999993 3 256 7999999999998775321110 01112223222
Q ss_pred cccccCcccCCCCCCC------ceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PVGTWVPKIGEPNRRP------LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~------~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
|..+ ++++.+++++.+|+++|.+++++.+||+| +|+++|+||.+||++....
T Consensus 90 ------------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 90 ------------LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp ------------HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ------------hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 4333 78899999999999999999999999999 7999999999999986554
No 99
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.46 E-value=3.8e-13 Score=119.45 Aligned_cols=116 Identities=14% Similarity=0.228 Sum_probs=97.9
Q ss_pred CCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccc
Q 010821 277 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 356 (500)
Q Consensus 277 ~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~ 356 (500)
++++++.+++++.+|+++|.+++++++||. + ++ +++|++|..||++++...... ....++
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~--~--~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v------- 80 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVV--D--GD---DIAGIVTERDYARKVVLQERS------SKATRV------- 80 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEE--S--SS---SEEEEEEHHHHHHHSGGGTCC------SSSCBH-------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEe--e--CC---EEEEEEEHHHHHHHHHhccCC------ccccCH-------
Confidence 568999999999999999999999999997 2 45 799999999999876543211 112334
Q ss_pred cCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 357 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 357 ~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
+++|.+++.++.+++++.+|+++|.+++++.+||+| +|+++|+||.+||++.+...
T Consensus 81 -----~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 81 -----EEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp -----HHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred -----HHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 344888899999999999999999999999999999 79999999999999977654
No 100
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.46 E-value=6.4e-14 Score=120.70 Aligned_cols=116 Identities=19% Similarity=0.319 Sum_probs=95.3
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHH-HHHhhcccCCCCccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~-~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
+|.++++++.+++++.+|+++|.+++++++||++ +++ +++|++|..|+++ ++..... ....++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~~-------~~~~~v--- 76 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICG---DDD---RLHGMLTDRDIVIKGLAAGLD-------PNTATA--- 76 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEEC---GGG---BEEEEEEHHHHHHTTGGGTCC-------TTTSBH---
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEEC---CCC---eEEEEEeHHHHHHHHHhcCCC-------ccccCH---
Confidence 3666889999999999999999999999999993 345 7999999999984 4432110 012233
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
+++|.++++++.+++++.+|+++|.+++.+.+||+|+ |+++|+||.+|+++.+
T Consensus 77 ---------~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 77 ---------GELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp ---------HHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred ---------HHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 4447788999999999999999999999999999997 9999999999998753
No 101
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.45 E-value=8.4e-13 Score=126.55 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=102.2
Q ss_pred CcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCC-----------
Q 010821 272 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS----------- 340 (500)
Q Consensus 272 g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~----------- 340 (500)
+.+|.++++++.+++++.+|+++|.+++++++||++. .+++ +++|+||.+||++++.........
T Consensus 16 ~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~ 91 (250)
T 2d4z_A 16 GDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEE 91 (250)
T ss_dssp TSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC
T ss_pred HHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccc
Confidence 4568999999999999999999999999999999942 2235 799999999999887643210000
Q ss_pred ----------------Cccccccc--------------------------------------------------cc--cc
Q 010821 341 ----------------SLPILKLP--------------------------------------------------IC--AI 352 (500)
Q Consensus 341 ----------------~~~~l~~~--------------------------------------------------v~--~l 352 (500)
...++... .. ++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 171 (250)
T 2d4z_A 92 GRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEML 171 (250)
T ss_dssp ---------------------------------------------------------------------------CCSCC
T ss_pred ccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccccccc
Confidence 00000000 00 00
Q ss_pred cc---cc-----cCccc--C-CCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PV---GT-----WVPKI--G-EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i---~~-----~~~~v--~-d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
.. .. ....| . .+|.+.++++.+++++.+|..+|...+++++||++ +|+++|+||+.||++++..
T Consensus 172 ~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 172 TLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp BHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 00 00 01122 2 35788899999999999999999999999999997 6999999999999987653
No 102
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.45 E-value=3.4e-13 Score=122.34 Aligned_cols=137 Identities=19% Similarity=0.285 Sum_probs=97.7
Q ss_pred cCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccC--CCCcccccccc-
Q 010821 275 FPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHC--SSSLPILKLPI- 349 (500)
Q Consensus 275 ~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~--~~~~~~l~~~v- 349 (500)
|.+ +++++.+++++.+|+++|.+++++++||++ +++ +++|++|.+||++++....... ....+......
T Consensus 10 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 10 MTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID---DNW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp SEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHTCC-------------------CCC
T ss_pred cCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---eEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 555 789999999999999999999999999993 345 7999999999985332110000 00000000000
Q ss_pred -----ccccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 350 -----CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 350 -----~~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
..+.......+++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 00000011124566688889999999999999999999999999999999999999999999986543
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.45 E-value=7.1e-13 Score=138.95 Aligned_cols=163 Identities=15% Similarity=0.203 Sum_probs=124.5
Q ss_pred EeeHHHHHHHHHHhcCCCCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCCcHHHHHHHHHhc-----
Q 010821 224 VLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN----- 298 (500)
Q Consensus 224 ilt~~Dii~il~~~~~~~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~sl~~a~~~m~~~----- 298 (500)
-++..|+.+++..+.........+-+..++..+...+...+.++...+|.+|.++++++.+++++.+|++.|.++
T Consensus 110 ~l~~dd~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~ 189 (473)
T 2zy9_A 110 ELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAE 189 (473)
T ss_dssp HSCHHHHHHHHHHHHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCS
T ss_pred hCCHHHHHHHHHhCCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcC
Confidence 355566666665552210001122333444555566666677888888999999999999999999999999986
Q ss_pred CCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCCCCceEecCCCCH
Q 010821 299 EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASL 378 (500)
Q Consensus 299 ~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~~~~~~v~~~~~l 378 (500)
+++++||++ +++ +++|++|.+|++.. ..+.+ ++++|.++++++++++++
T Consensus 190 ~~~~ipVvd---~~~---~lvGiVt~~Dll~~-------------~~~~~------------v~dim~~~~~~v~~~~~l 238 (473)
T 2zy9_A 190 TIYYIYVVD---EKG---RLKGVLSLRDLIVA-------------DPRTR------------VAEIMNPKVVYVRTDTDQ 238 (473)
T ss_dssp EEEEEEEEC---TTS---BEEEEEEHHHHHHS-------------CTTSB------------GGGTSBSSCCCEESSSBH
T ss_pred ceeEEEEEC---CCC---cEEEEEEHHHHhcC-------------CCCCc------------HHHHhCCCCeEEeCCCcH
Confidence 589999993 335 79999999999841 01223 345588899999999999
Q ss_pred HHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 379 SAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 379 ~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
.+++++|.+++.+.+||+|++|+++|+||.+|++.....
T Consensus 239 ~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 239 EEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 999999999999999999999999999999999986644
No 104
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.44 E-value=3.7e-13 Score=119.85 Aligned_cols=121 Identities=9% Similarity=0.153 Sum_probs=96.5
Q ss_pred cCC--CceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 275 FPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 275 ~~~--~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
|.+ +++++.+++++.+|+++|.+++++++||++ +++ +++|++|..||++++...... ........
T Consensus 20 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~--~~~~~~~~----- 86 (159)
T 1yav_A 20 MIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD---PSY---RLHGLIGTNMIMNSIFGLERI--EFEKLDQI----- 86 (159)
T ss_dssp SEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTC---BEEEEEEHHHHHHHHBCSSSB--CGGGTTTS-----
T ss_pred hCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---CEEEEeEHHHHHHHhhhhccc--chhhhccC-----
Confidence 555 788999999999999999999999999993 345 799999999999876432100 00001122
Q ss_pred cccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
.++++|.++++++.+++++.+|+++|.++++ +||+|++|+++|+||.+|+++....
T Consensus 87 -------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 87 -------TVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp -------BHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred -------CHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 3344588889999999999999999998876 9999989999999999999987654
No 105
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.43 E-value=1.5e-12 Score=118.70 Aligned_cols=134 Identities=10% Similarity=0.109 Sum_probs=99.4
Q ss_pred ceec--CCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCC----ccccccccccc
Q 010821 279 LVYA--GPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSS----LPILKLPICAI 352 (500)
Q Consensus 279 ~v~v--~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~----~~~l~~~v~~l 352 (500)
++++ .+++++.+|+++|.+++++++||++. ++++ +++|++|..|+++++.......... ...+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7888 99999999999999999999999931 2456 7999999999999876532110000 00000000000
Q ss_pred ccc-ccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 353 PVG-TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 353 ~i~-~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
... ....+++++|.++++++.+++++.+|+++|.+++++.+||+| +|+++|+||.+||++.+..
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 000 111256677888899999999999999999999999999999 8999999999999986654
No 106
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.42 E-value=2.3e-12 Score=123.31 Aligned_cols=210 Identities=11% Similarity=0.172 Sum_probs=127.4
Q ss_pred ccccccCCCCcceEEEcCCCCHHHHHHHHHhcccccCCCeEeeeeeCCCCeEEEEeeHHHHHHHHHHhcCCCCCCChhhh
Q 010821 170 HTAYELLPESGKVVALDIDLPVKQAFHILYEQSSRLQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEEL 249 (500)
Q Consensus 170 ~~~~d~~p~s~~vv~ld~~~~v~~A~~~l~~~~~~~~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~l~~~~l 249 (500)
.++.|+|- .+++++..+.++.+|++.|.++ ++..+||+|.+ ++++|++|..|++..+...... .....
T Consensus 7 ~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~-----~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~----~~~~~ 74 (245)
T 3l2b_A 7 LKVEDLEM--DKIAPLAPEVSLKMAWNIMRDK-----NLKSIPVADGN-NHLLGMLSTSNITATYMDIWDS----NILAK 74 (245)
T ss_dssp CBGGGSCC--BCCCCBCTTCBHHHHHHHHHHT-----TCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCT----THHHH
T ss_pred CcHHHhcC--CCCcEECCCCcHHHHHHHHHHc-----CCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhh----hhhhh
Confidence 35667763 4688999999999999999999 99999999964 7999999999999877532110 00111
Q ss_pred cccchhHHHHHHHhhcccc-CC-----------------C-CcccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCC
Q 010821 250 ETHTISAWKEGKAYLNRQI-DS-----------------H-GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS 310 (500)
Q Consensus 250 ~~~~i~~~~~~~~~~~~~~-~~-----------------~-g~~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~ 310 (500)
...+...+.+......... .. . ..+....++.+. .-.++...+.+++++.+++.....
T Consensus 75 ~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg---dr~~~~~~~i~~~~~~liit~~~~ 151 (245)
T 3l2b_A 75 SATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG---DRAEIQAELIELKVSLLIVTGGHT 151 (245)
T ss_dssp TTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC---SCHHHHHHHHHTTCSEEEECTTCC
T ss_pred ccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC---CCHHHHHHHHHcCCCEEEECCCCC
Confidence 1222222222211100000 00 0 001122233331 136788888999999888873110
Q ss_pred CCC------CCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCC-CCceEecCCCCHHHHHH
Q 010821 311 QDG------SFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALN 383 (500)
Q Consensus 311 ~~~------~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~-~~~~~v~~~~~l~ea~~ 383 (500)
-.. ....+-.+.+..|........ .... +++++|+ +++.++.+++++.+|++
T Consensus 152 ~~~~v~~~a~~~~~~~i~t~~d~~~~~~~~---------~~~~------------~v~~im~~~~~~~~~~~~~~~~~~~ 210 (245)
T 3l2b_A 152 PSKEIIELAKKNNITVITTPHDSFTASRLI---------VQSL------------PVDYVMTKDNLVAVSTDDLVEDVKV 210 (245)
T ss_dssp CCHHHHHHHHHHTCEEEECSSCHHHHHHHG---------GGGS------------BHHHHSBCTTCCCEETTSBHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEEeCCChHHHHHHH---------hcCC------------ceeeEecCCccEEECCCCcHHHHHH
Confidence 000 000123344444433221110 0012 3455598 89999999999999999
Q ss_pred HHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 384 LLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 384 ~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
+|.+++++++||+|++|+++|+||.+|+++..
T Consensus 211 ~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 211 TMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred HHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 99999999999999999999999999998754
No 107
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.42 E-value=4.1e-13 Score=140.77 Aligned_cols=116 Identities=18% Similarity=0.295 Sum_probs=102.3
Q ss_pred ccCCCCCCCceEecCCCCHHHHHHHHHHC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHH
Q 010821 360 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 434 (500)
Q Consensus 360 ~v~d~m~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 434 (500)
+++++|.+++++++++.++.+|++.|.++ +++++||+|++++++|+++.+|++.. . .+.++.+
T Consensus 156 ~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~--~--------~~~~v~d-- 223 (473)
T 2zy9_A 156 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--D--------PRTRVAE-- 223 (473)
T ss_dssp BSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS--C--------TTSBGGG--
T ss_pred CHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC--C--------CCCcHHH--
Confidence 45677999999999999999999999886 57899999998999999999999762 1 1356766
Q ss_pred hcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 435 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 435 ~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.++++++++++++.+|++.|.+++.+.+||||+ +|+++|+||..||++.+.
T Consensus 224 -----------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 -----------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp -----------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -----------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHHHH
Confidence 55778999999999999999999999999999995 799999999999998763
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.38 E-value=2e-12 Score=136.40 Aligned_cols=114 Identities=18% Similarity=0.304 Sum_probs=101.1
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcC--CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 362 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 362 ~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~--~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
++.|..+++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|+... . ..+.++.++|
T Consensus 116 ~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~------~~~~~V~~vM----- 181 (511)
T 3usb_A 116 ESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---Q------DYSIKISDVM----- 181 (511)
T ss_dssp SSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---C------CSSSBHHHHC-----
T ss_pred ccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---c------cCCCcHHHhc-----
Confidence 3447778899999999999999999999999999998 8999999999999641 1 1257788755
Q ss_pred CCCcccccCC-CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 440 SYSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 440 ~~~~~~im~~-~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
.+ +++++++++++.+++++|.+++++.+||||+ +|+++|+||+.||++.+
T Consensus 182 --------~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 182 --------TKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEKVI 232 (511)
T ss_dssp --------CCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHH
T ss_pred --------ccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHHhh
Confidence 55 8999999999999999999999999999995 79999999999999876
No 109
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.37 E-value=1.1e-13 Score=150.16 Aligned_cols=137 Identities=14% Similarity=0.050 Sum_probs=101.9
Q ss_pred ccCCCCC--CCceEecCCCCHHHHHHHHH-HCCCCEEEEEcCCCcEEEEEeHHHHHHHHHccccccc-C---------cc
Q 010821 360 KIGEPNR--RPLAMLRPSASLSAALNLLV-QAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHI-N---------LS 426 (500)
Q Consensus 360 ~v~d~m~--~~~~~v~~~~~l~ea~~~m~-~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~-~---------~~ 426 (500)
+++|+|. +++.++++++++.|+.+.|. +++++.+||+|++++++|+|+++|+.+.......... . ..
T Consensus 454 ~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~ 533 (632)
T 3org_A 454 TAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLD 533 (632)
T ss_dssp BHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC------------------
T ss_pred cHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccC
Confidence 6778898 88999999999999999999 7999999999999999999999999875443210000 0 00
Q ss_pred c----ccHHHHHhcC----------------CCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEE
Q 010821 427 E----MTIHQALQLG----------------QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVE 486 (500)
Q Consensus 427 ~----~~v~~~l~~~----------------~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~li 486 (500)
. ..+....... ...+...++|+++++++++++++.+|++.|.+++++++||+| +|+++
T Consensus 534 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~lv 611 (632)
T 3org_A 534 AADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKLV 611 (632)
T ss_dssp -------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEEE
T ss_pred HHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEEE
Confidence 0 0011110000 000012358999999999999999999999999999999995 69999
Q ss_pred EEEehHHHHHHh
Q 010821 487 GIVSLSDIFKFL 498 (500)
Q Consensus 487 GiIS~~DIl~~l 498 (500)
|+||++||++.+
T Consensus 612 GIVT~~Dll~~~ 623 (632)
T 3org_A 612 GIVEREDVAYGY 623 (632)
T ss_dssp EEEEGGGTEECC
T ss_pred EEEehhhHHHHH
Confidence 999999998654
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.31 E-value=7.1e-12 Score=132.34 Aligned_cols=115 Identities=21% Similarity=0.297 Sum_probs=100.9
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEc--CCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCC
Q 010821 362 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD--DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 439 (500)
Q Consensus 362 ~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 439 (500)
+++|..+++++.+++++.+++++|.+++++.+||+| ++++++|+||.+|++... ..+.++.+
T Consensus 93 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---------~~~~~v~~------- 156 (491)
T 1zfj_A 93 ENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---------DYNAPISE------- 156 (491)
T ss_dssp TTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS---------CSSSBTTT-------
T ss_pred HhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---------cCCCcHHH-------
Confidence 455888899999999999999999999999999999 789999999999998531 01355555
Q ss_pred CCCcccccCC-CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 440 SYSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 440 ~~~~~~im~~-~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+|.+ +++++++++++.++++.|.+++.+++||||+ +|+++|+||..||++.+.
T Consensus 157 ------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 157 ------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHh
Confidence 5566 8899999999999999999999999999995 799999999999999764
No 111
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.28 E-value=1e-11 Score=132.09 Aligned_cols=121 Identities=14% Similarity=0.160 Sum_probs=100.2
Q ss_pred CcccCCCceecCCC-CcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccc
Q 010821 272 GKAFPRPLVYAGPN-DNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 350 (500)
Q Consensus 272 g~~~~~~~v~v~~~-~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~ 350 (500)
+.+|.++++++.++ +++.+|+++|.+++++++||+ |.+++ +++|+||.+||++.+..... ....++
T Consensus 387 ~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVv--d~~~g---~lvGiVt~~Dll~~l~~~~~-------~~~~~V- 453 (527)
T 3pc3_A 387 AELELPAPPVILKSDATVGEAIALMKKHRVDQLPVV--DQDDG---SVLGVVGQETLITQIVSMNR-------QQSDPA- 453 (527)
T ss_dssp GGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEE--CTTTC---CEEEEEEHHHHHHHHHHHCC-------CTTSBG-
T ss_pred HHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEE--ECCCC---EEEEEEEHHHHHHHHHhccC-------cCCCcH-
Confidence 45688899999999 999999999999999999999 32355 79999999999988765311 112334
Q ss_pred cccccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC----CcEEEEEeHHHHHHHHHcc
Q 010821 351 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN----DSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 351 ~l~i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~----g~lvGiis~~Di~~~~~~~ 418 (500)
+++|.++++++.+++++.+++++|.+++ .+||+|++ |+++|+||..||++.+.+.
T Consensus 454 -----------~~im~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 454 -----------IKALNKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp -----------GGGEETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred -----------HHHhcCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 4448889999999999999999997665 47999984 8999999999999977654
No 112
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.27 E-value=1.7e-12 Score=136.55 Aligned_cols=114 Identities=16% Similarity=0.271 Sum_probs=86.5
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCC
Q 010821 362 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 441 (500)
Q Consensus 362 ~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 441 (500)
+++|..+++++.+++++.+++++|.+++++.+||+|++++++|+||.+|+... . ..+.++.++
T Consensus 92 ~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~------~~~~~v~di-------- 154 (496)
T 4fxs_A 92 EAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T------DLTKSVAAV-------- 154 (496)
T ss_dssp CC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C------CTTSBGGGT--------
T ss_pred ccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c------cCCCcHHHH--------
Confidence 44577889999999999999999999999999999999999999999999621 1 124567764
Q ss_pred CcccccC-C-CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 442 SPYELRS-Q-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 442 ~~~~im~-~-~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
|. + +++++++++++.+++++|.+++++.+||||+ +|+++|+||+.||++..
T Consensus 155 -----M~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 155 -----MTPKERLATVKEGATGAEVQEKMHKARVEKILVVND-EFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -----SEEGGGCCEEECC----CGGGTCC---CCCEEEECT-TSBCCEEECCC-----C
T ss_pred -----hcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHHHhh
Confidence 45 3 5899999999999999999999999999995 79999999999999863
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.27 E-value=5.8e-11 Score=125.27 Aligned_cols=155 Identities=14% Similarity=0.211 Sum_probs=115.9
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCC-CCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSS-QDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~-~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
.|..+++++.+++++.+|+++|.+++++++||++ + .++ +++|+||.+|++. . .....++.++
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd--~g~~~---~lvGiVt~rDl~~-------~-----~~~~~~V~~v 180 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVN--NLDER---KLVGIITNRDMRF-------I-----QDYSIKISDV 180 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEES--CTTTC---BEEEEEEHHHHTT-------C-----CCSSSBHHHH
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEe--cCCCC---EEEEEEEehHhhh-------h-----ccCCCcHHHh
Confidence 3667889999999999999999999999999994 2 145 7999999999962 0 1123344444
Q ss_pred cccccCcccCCCCCC-CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHH
Q 010821 353 PVGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIH 431 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~ 431 (500)
|.+ +++++++++++.+++++|.+++++.+||+|++|+++|+||..|+++....... +.
T Consensus 181 ------------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---------~~ 239 (511)
T 3usb_A 181 ------------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---------AK 239 (511)
T ss_dssp ------------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---------CB
T ss_pred ------------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---------hh
Confidence 887 89999999999999999999999999999999999999999999987654211 11
Q ss_pred HHHhcCCCCCCcccccCC--CceEeCCCCCHHHHHHHHhcCCCCEEEEEe
Q 010821 432 QALQLGQDSYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVE 479 (500)
Q Consensus 432 ~~l~~~~~~~~~~~im~~--~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd 479 (500)
+. +.+ -...+.......+.++.|.+.++..+.|-.
T Consensus 240 D~-------------~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 240 DK-------------QGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp CT-------------TSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred hh-------------ccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 10 011 122333344455666777888888766544
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.25 E-value=6e-13 Score=140.62 Aligned_cols=115 Identities=17% Similarity=0.349 Sum_probs=4.7
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCC
Q 010821 362 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 441 (500)
Q Consensus 362 ~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 441 (500)
+++|.++++++.+++++.+|+++|.+++++.+||+|++++++|+||.+|+..... .+.++.++|
T Consensus 98 ~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~---------~~~~v~~im------- 161 (494)
T 1vrd_A 98 ENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKN---------LSKKIKDLM------- 161 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcC---------CCCcHHHHh-------
Confidence 4558888999999999999999999999999999998899999999999986311 135666654
Q ss_pred CcccccCC--CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 442 SPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 442 ~~~~im~~--~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.+ +++++.+++++.+++++|.+++++++||||+ +|+++|+||..||++.+.
T Consensus 162 ------~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 162 ------TPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ------------------------------------------------------CHHHHT
T ss_pred ------CCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhc
Confidence 55 8999999999999999999999999999995 799999999999998864
No 115
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.25 E-value=5.7e-13 Score=140.70 Aligned_cols=113 Identities=12% Similarity=0.151 Sum_probs=0.0
Q ss_pred CCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCC---CcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCC
Q 010821 365 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN---DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 441 (500)
Q Consensus 365 m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~---g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 441 (500)
|.++++++.+++++.+|+++|.+++++++||+|++ ++++|+||.+|++.. .. ....++.++|
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~~------~~~~~V~diM------- 167 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--LT------QTETKVSDMM------- 167 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--hc------cccCcHHHHh-------
Confidence 66788999999999999999999999999999987 899999999999864 11 1245677654
Q ss_pred CcccccCCC--ceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 442 SPYELRSQR--CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 442 ~~~~im~~~--~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
.++ ++++++++++.+|+++|.+++++.+||||+ +|+++|+||++||++.+.
T Consensus 168 ------~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 168 ------TPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ------CCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhh
Confidence 555 999999999999999999999999999995 799999999999998764
No 116
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.24 E-value=6.7e-13 Score=139.45 Aligned_cols=113 Identities=17% Similarity=0.287 Sum_probs=1.0
Q ss_pred CCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCC
Q 010821 362 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 441 (500)
Q Consensus 362 ~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 441 (500)
+++|..+++++.+++++.+++++|.+++++.+||+| +++++|+||.+|+..... .+.++.++|
T Consensus 91 ~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~vM------- 153 (490)
T 4avf_A 91 ETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAAIM------- 153 (490)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHHHh-------
Confidence 455777899999999999999999999999999999 899999999999964211 135677654
Q ss_pred CcccccC-C-CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 442 SPYELRS-Q-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 442 ~~~~im~-~-~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
. + +++++++++++.+|+++|.+++++.+||||+ +|+++|+||+.||++.+
T Consensus 154 ------tp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 154 ------TPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ------ccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhhhc
Confidence 5 3 6999999999999999999999999999995 79999999999999864
No 117
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.16 E-value=2.9e-12 Score=131.95 Aligned_cols=109 Identities=22% Similarity=0.274 Sum_probs=0.0
Q ss_pred CCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcC---CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCC
Q 010821 365 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 441 (500)
Q Consensus 365 m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~---~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~ 441 (500)
|..+++++.|+.++.+|+++|.+++++.+||+++ +++|+||||.+|+... + ...+|.++
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d--------~~~~V~ev-------- 205 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D--------AETPIKSV-------- 205 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c--------cceEhhhh--------
Confidence 4457889999999999999999999999999986 6799999999998652 1 13567764
Q ss_pred CcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHH
Q 010821 442 SPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKF 497 (500)
Q Consensus 442 ~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~ 497 (500)
|++++++++.+.++.+|.++|.++++..|||||+ +++|+|+||+.||++.
T Consensus 206 -----MT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 206 -----MTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS-NGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred -----cccceEEecCCCCHHHHHHHHHHccccceeEEcc-CCcEEEEEEechhhhh
Confidence 4778999999999999999999999999999996 7999999999999875
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.12 E-value=4.5e-12 Score=133.80 Aligned_cols=154 Identities=18% Similarity=0.164 Sum_probs=18.4
Q ss_pred cCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCC--CCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccc
Q 010821 275 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQ--DGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 352 (500)
Q Consensus 275 ~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~--~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 352 (500)
|.++++++.+++|+.+|+++|.+++++++||++ ++ .+ +++|+||.+|++.. . .....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd--~~~~~g---~lvGiVt~~Dl~~~-~----------~~~~~----- 161 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTD--DGTPHG---VLLGLVTQRDYPID-L----------TQTET----- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEE--CCCcCC---eEEEEEEHHHHHhh-h----------ccccC-----
Confidence 667899999999999999999999999999994 22 25 79999999999842 0 01122
Q ss_pred cccccCcccCCCCCCC--ceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccH
Q 010821 353 PVGTWVPKIGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 430 (500)
Q Consensus 353 ~i~~~~~~v~d~m~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v 430 (500)
+++++|.++ ++++++++++.+|+++|.+++++.+||+|++|+++|+||.+||++....... . ....
T Consensus 162 -------~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~----~-~d~~ 229 (503)
T 1me8_A 162 -------KVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE----L-VDSQ 229 (503)
T ss_dssp -------------------------------------------------------------------CCC----C-BCTT
T ss_pred -------cHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc----h-hccc
Confidence 345558877 9999999999999999999999999999999999999999999986543211 0 0000
Q ss_pred HHHHhcCCCCCCcccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEE
Q 010821 431 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVI 477 (500)
Q Consensus 431 ~~~l~~~~~~~~~~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~V 477 (500)
.. ++ ....+.. ....+.++.|.+.+++.+.|
T Consensus 230 ~~-------------l~--v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 230 KR-------------YL--VGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp SC-------------BC--CEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cc-------------cc--cccccCc-hhHHHHHHHHHhhhccceEE
Confidence 00 11 1123344 56667788888888886544
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.10 E-value=8.9e-10 Score=116.22 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=98.5
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|..+++++.+++++.+|+++|.+++++++||++. .+++ +++|+||.+|++.. . ....
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~-----~-------~~~~------ 152 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI-----S-------DYNA------ 152 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC-----S-------CSSS------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh-----c-------cCCC------
Confidence 47778999999999999999999999999999931 0345 79999999999842 0 0122
Q ss_pred ccccCcccCCCCCC-CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 354 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 354 i~~~~~~v~d~m~~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
+++++|.+ +++++++++++.+++++|.+++++.+||+|++|+++|++|..||++....
T Consensus 153 ------~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 153 ------PISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ------BTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ------cHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 34566887 88999999999999999999999999999999999999999999987653
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.10 E-value=6.3e-11 Score=128.58 Aligned_cols=134 Identities=15% Similarity=0.105 Sum_probs=96.9
Q ss_pred ccC--CCceecCCCCcHHHHHHHHH-hcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCc--------
Q 010821 274 AFP--RPLVYAGPNDNLKDVARKIL-HNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSL-------- 342 (500)
Q Consensus 274 ~~~--~~~v~v~~~~sl~~a~~~m~-~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~-------- 342 (500)
+|. ++++++++++++.|+.+.|. +++.+++||+| +++ +++|++|.+|+++.+.+.........
T Consensus 458 iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd---~~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~ 531 (632)
T 3org_A 458 IMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVID---ANG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVL 531 (632)
T ss_dssp HCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBC---TTC---BBCCEESHHHHTTTTTTC----------------
T ss_pred HhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEe---cCC---eEEEEEEHHHHHHHHHHHhhhcccccccccceec
Confidence 467 78999999999999999999 79999999994 245 79999999999977654321100000
Q ss_pred ---ccccccccccc-----------------ccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcE
Q 010821 343 ---PILKLPICAIP-----------------VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSL 402 (500)
Q Consensus 343 ---~~l~~~v~~l~-----------------i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l 402 (500)
..+.+.+..+. +-...++++++|+++++++++++++.+|+++|.+++++.+||+ ++|++
T Consensus 532 ~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~l 610 (632)
T 3org_A 532 LDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKL 610 (632)
T ss_dssp ---------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEE
T ss_pred cCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEE
Confidence 00000011100 0001113788999999999999999999999999999999999 68999
Q ss_pred EEEEeHHHHHHH
Q 010821 403 LDIYCRSDITAL 414 (500)
Q Consensus 403 vGiis~~Di~~~ 414 (500)
+|+||++|+++.
T Consensus 611 vGIVT~~Dll~~ 622 (632)
T 3org_A 611 VGIVEREDVAYG 622 (632)
T ss_dssp EEEEEGGGTEEC
T ss_pred EEEEehhhHHHH
Confidence 999999999763
No 121
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.10 E-value=1.5e-11 Score=126.68 Aligned_cols=162 Identities=22% Similarity=0.285 Sum_probs=22.1
Q ss_pred EeeeeeCCCCeEEEEeeHHHHHHHHHHhcCC---CCCCChhhhcccchhHHHHHHHhhccccCCCCcccCCCceecCCCC
Q 010821 210 MAPLWDFSKARFVGVLSASDFILILRELGNH---GSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPND 286 (500)
Q Consensus 210 ~~pv~d~~~~~~vGilt~~Dii~il~~~~~~---~~~l~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~v~v~~~~ 286 (500)
.+|++.+. .--+|..+.+-.+.+.+.- +.+++.++- ...++.+++.. . .+-.+++++.|+.
T Consensus 92 ~iPlvSA~----MDTVTe~~MAIamAr~GGiGvIH~n~sie~Q----a~~V~~VKr~e------~--g~i~dPvtl~P~~ 155 (556)
T 4af0_A 92 NTPFLSSP----MDTVTEDRMAIALALHGGLGIIHHNCSAEEQ----AAMVRRVKKYE------N--GFITDPLCLGPDA 155 (556)
T ss_dssp SSCEEECC----CTTTCSHHHHHHHHHTTCEEEECCSSCHHHH----HHHHHHHHHCC------C---------------
T ss_pred CCCEEecC----cccccCHHHHHHHHHCCCeEEEcCCCCHHHH----HHHHHHHHhcc------c--CccCCCeEcCCCC
Confidence 46887652 3346777777666655421 134433221 22334444322 1 1445689999999
Q ss_pred cHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCccccccccccccccccCcccCCCCC
Q 010821 287 NLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR 366 (500)
Q Consensus 287 sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i~~~~~~v~d~m~ 366 (500)
|+.+|.++|.+++++.+||++....++ +|+||+|.+|+. + . ....+ ++++|+
T Consensus 156 Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f-----~-------d~~~~------------V~evMT 207 (556)
T 4af0_A 156 TVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-F-----Q-------DAETP------------IKSVMT 207 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-c-----c-------ccceE------------hhhhcc
Confidence 999999999999999999995322345 899999999974 1 1 11233 455599
Q ss_pred CCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 367 RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 367 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
++++++++..++.+|.++|.++++..+||||++++|+|+||++|+.+..
T Consensus 208 ~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 208 TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------
T ss_pred cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 9999999999999999999999999999999999999999999998754
No 122
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.08 E-value=2.3e-10 Score=124.77 Aligned_cols=79 Identities=24% Similarity=0.429 Sum_probs=65.2
Q ss_pred eeeEEEEecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCCCCe----eeCCCC
Q 010821 25 LIPMRFVWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPF----ISSEYG 99 (500)
Q Consensus 25 ~~~~~f~~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~~~~----~~~~~g 99 (500)
..-+.|.||.+|+.|+|+|+||+|.+. .+|.+ .++.|++++.||||.|+|||+|||+|..||.+|. ..++++
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~---~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~~~~~~~~~~ 92 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ---EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPERRVYTRKGYK 92 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE---CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCEEEEEEGGGT
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE---cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCcccccccCcC
Confidence 467889999999999999999999985 35544 4689999999999999999999999999999983 445555
Q ss_pred CeeeEEE
Q 010821 100 IVNTVLL 106 (500)
Q Consensus 100 ~~nn~l~ 106 (500)
..+.+..
T Consensus 93 ~~~~~~~ 99 (645)
T 4aef_A 93 FHREVNV 99 (645)
T ss_dssp EEEEEEE
T ss_pred cccceee
Confidence 5555443
No 123
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.07 E-value=1.8e-12 Score=137.62 Aligned_cols=117 Identities=21% Similarity=0.247 Sum_probs=67.9
Q ss_pred cCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcC---CCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcC
Q 010821 361 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 437 (500)
Q Consensus 361 v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~---~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~ 437 (500)
+.++|.++++++.+++++.+|+++|.+++++.+||+|+ +++++|+||.+|+...... ....++.++|
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~vm--- 179 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSEVM--- 179 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHHHh---
Confidence 35568888899999999999999999999999999997 5899999999999764210 1235666644
Q ss_pred CCCCCcccccCC--CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 438 QDSYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 438 ~~~~~~~~im~~--~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
.+ +++++.+++++.+|+++|.+++.+++||||+ +|+++|+||++||++.+
T Consensus 180 ----------~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 180 ----------TPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND-CDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-SSCCC----CCCCSSCC
T ss_pred ----------CCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHHHHh
Confidence 55 8999999999999999999999999999995 79999999999987654
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.02 E-value=3.1e-11 Score=127.01 Aligned_cols=109 Identities=17% Similarity=0.330 Sum_probs=0.0
Q ss_pred CCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHHhcCCCCCCc
Q 010821 364 PNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSP 443 (500)
Q Consensus 364 ~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 443 (500)
.|..+++++.+++++.+++++|.+++++.+||+|+ ++++|+|+.+|++. . ...++.++
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~--------~~~~v~~i---------- 155 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R--------EGKLVKEL---------- 155 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C--------CCCCHHHH----------
Confidence 46678899999999999999999999999999997 99999999999975 1 13566664
Q ss_pred ccccCCCceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 010821 444 YELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 498 (500)
Q Consensus 444 ~~im~~~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l 498 (500)
|.++++++++++++.++++.|.+++++.+||||+ +|+++|+||..||++.+
T Consensus 156 ---m~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 156 ---MTKEVITVPESIEVEEALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVARK 206 (486)
T ss_dssp -------------------------------------------------------
T ss_pred ---ccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHHhh
Confidence 4668899999999999999999999999999995 79999999999999865
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.02 E-value=1.2e-10 Score=122.35 Aligned_cols=112 Identities=17% Similarity=0.201 Sum_probs=82.7
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
.|..+++++.+++++.+|+++|.+++++++||++ +++ +++|+||.+|++. . .....++
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd---~~~---~lvGiVt~rDL~~------~------~~~~~~v---- 151 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVT---ENN---ELVGIITGRDVRF------V------TDLTKSV---- 151 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEEC---SSS---BEEEEEEHHHHTT------C------CCTTSBG----
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEc---cCC---EEEEEEEHHHHhh------c------ccCCCcH----
Confidence 4677899999999999999999999999999994 245 7999999999861 1 1112333
Q ss_pred ccccCcccCCCCC-C-CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 354 VGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 354 i~~~~~~v~d~m~-~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
.++|+ + +++++++++++.+++++|.++++..+||+|++|+++|+||..|+++..
T Consensus 152 --------~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 152 --------AAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp --------GGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred --------HHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 44487 4 589999999999999999999999999999999999999999998753
No 126
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.99 E-value=1.8e-10 Score=120.92 Aligned_cols=112 Identities=17% Similarity=0.212 Sum_probs=0.0
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
.|..+++++.+++++.+|+++|.+++++++||+ | ++ +++|+||.+|+... .....
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVv--d--~g---~lvGIVt~rDl~~~------------~~~~~------ 147 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVV--E--QG---ELVGIVTGRDLRVK------------PNAGD------ 147 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEE--E--CC---EEEEEEEhHHhhhc------------cccCC------
Confidence 466788999999999999999999999999999 3 45 79999999998521 01122
Q ss_pred ccccCcccCCCCC-C-CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q 010821 354 VGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 416 (500)
Q Consensus 354 i~~~~~~v~d~m~-~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~ 416 (500)
+++++|+ + +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++...
T Consensus 148 ------~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 ------TVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------cHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 3455588 4 6999999999999999999999999999999999999999999998653
No 127
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.95 E-value=1.5e-10 Score=122.22 Aligned_cols=114 Identities=18% Similarity=0.317 Sum_probs=5.0
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
+|.++++++.+++++.+|+++|.+++++.+||++ +++ +++|+||.+|+++. . ....
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd---~~~---~lvGivt~~Dl~~~------~------~~~~------ 155 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVD---EEG---RLVGLLTNRDVRFE------K------NLSK------ 155 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEc---CCC---EEEEEEEHHHHHhh------c------CCCC------
Confidence 4677899999999999999999999999999993 345 79999999999741 0 0122
Q ss_pred ccccCcccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHc
Q 010821 354 VGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 417 (500)
Q Consensus 354 i~~~~~~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~ 417 (500)
++.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|+||..|+++....
T Consensus 156 ------~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 156 ------KIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------------------------------------CHHHHTC
T ss_pred ------cHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 34555887 89999999999999999999999999999999999999999999987643
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.79 E-value=5.5e-10 Score=117.52 Aligned_cols=110 Identities=15% Similarity=0.309 Sum_probs=0.4
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCCCCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 353 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 353 (500)
.|..+++++.+++++.+++++|.+++++++||++ . + +++|+|+.+|++. . ...
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd--~--~---~lvGivt~~Dl~~------~--------~~~------ 150 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVE--D--E---KVVGIITKKDIAA------R--------EGK------ 150 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEE--C--C---EEEEEEEHHHhcc------C--------CCC------
Confidence 4667899999999999999999999999999993 2 5 7999999999873 0 012
Q ss_pred ccccCcccCCCCCCCceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q 010821 354 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 416 (500)
Q Consensus 354 i~~~~~~v~d~m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~ 416 (500)
++.++|.++++++++++++.+++++|.+++++.+||+|++|+++|+||.+||++...
T Consensus 151 ------~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 151 ------LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------------C
T ss_pred ------CHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 234558888999999999999999999999999999999999999999999998643
No 129
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.78 E-value=1.1e-08 Score=77.58 Aligned_cols=62 Identities=16% Similarity=0.334 Sum_probs=49.1
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHH
Q 010821 369 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 434 (500)
Q Consensus 369 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 434 (500)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+.... .+..+.+++++|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~---~~~~~~~V~~iM 63 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKG---KNPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTT---CCGGGCBGGGTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcC---CCcccCCHHHhc
Confidence 57899999999999999999999999998 689999999999986432221 122346777643
No 130
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.76 E-value=2.9e-10 Score=120.53 Aligned_cols=115 Identities=21% Similarity=0.280 Sum_probs=65.8
Q ss_pred ccCCCceecCCCCcHHHHHHHHHhcCCceeeEEecCCC--CCCCceEEEEEehhhHHHHHHhhcccCCCCcccccccccc
Q 010821 274 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQ--DGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 351 (500)
Q Consensus 274 ~~~~~~v~v~~~~sl~~a~~~m~~~~i~~lpVv~~d~~--~~~~~~liGivs~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 351 (500)
+|.++++++.+++++.+|+++|.+++++.+||++ ++ ++ +++|+||.+|+..... .....
T Consensus 113 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~---- 173 (514)
T 1jcn_A 113 GFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITE--TGTMGS---KLVGIVTSRDIDFLAE----------KDHTT---- 173 (514)
T ss_dssp TSCSSCCCCCC-----------------CEESCC-------------CCEECTTTTC-----------------------
T ss_pred ccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEe--CCCcCC---EEEEEEEHHHHHhhhh----------ccCCC----
Confidence 4667889999999999999999999999999994 32 35 7999999999864210 00112
Q ss_pred ccccccCcccCCCCCC--CceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 010821 352 IPVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 415 (500)
Q Consensus 352 l~i~~~~~~v~d~m~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~ 415 (500)
++.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|+||++|+++..
T Consensus 174 --------~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 174 --------LLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ---------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred --------CHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 34555887 899999999999999999999999999999999999999999987643
No 131
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.65 E-value=6.2e-08 Score=73.49 Aligned_cols=47 Identities=23% Similarity=0.408 Sum_probs=43.7
Q ss_pred ceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 451 CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 451 ~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
++++.+++++.+|+++|.+++++++||+| +|+++||||.+||++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 67899999999999999999999999999 589999999999997653
No 132
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.48 E-value=2.6e-07 Score=69.53 Aligned_cols=62 Identities=16% Similarity=0.333 Sum_probs=49.8
Q ss_pred ceEecCCCCHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHHHcccccccCcccccHHHHH
Q 010821 369 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 434 (500)
Q Consensus 369 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~~~~~~~~~~~~~~~~~v~~~l 434 (500)
++++.+++++.+|+++|.+++++++||+|+ |+++|+||.+|+++....... ...+.++.++|
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~---~~~~~~v~~im 63 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK---NPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC---CGGGCBGGGTC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC---CcccCCHHHhc
Confidence 578999999999999999999999999997 999999999999986543211 12245677644
No 133
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.42 E-value=6.2e-07 Score=67.41 Aligned_cols=48 Identities=25% Similarity=0.461 Sum_probs=44.2
Q ss_pred CceEeCCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010821 450 RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 499 (500)
Q Consensus 450 ~~~~v~~~~tL~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~~l~ 499 (500)
+++++.+++++.+|+++|.+++++++||+| + |+++|+||.+||++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999 3 99999999999999863
No 134
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.37 E-value=7.8e-07 Score=76.03 Aligned_cols=57 Identities=18% Similarity=0.358 Sum_probs=45.3
Q ss_pred eeeEEEEecC---CCceEEEEEc---cCCCCCC--CCCCccc--CCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 25 LIPMRFVWPY---GGRSVFLSGS---FNRWSEL--LPMSPVE--GCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 25 ~~~~~f~~~~---~~~~V~l~Gs---f~~W~~~--~~m~~~~--~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
.+.++|.-.. .++.|+|+|| +.+|++. ++|.+.+ .....|++++.||+| .++|||++
T Consensus 8 ~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 8 PSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred eEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 4667776543 3789999999 9999974 4887641 146899999999998 59999998
No 135
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.91 E-value=6.3e-06 Score=68.00 Aligned_cols=57 Identities=21% Similarity=0.476 Sum_probs=43.4
Q ss_pred eeeEEEEecC---CCceEEEEEcc---CCCCCC--CCCCcccC--CCCeEEEEEEcCCc-eEEEEEEE
Q 010821 25 LIPMRFVWPY---GGRSVFLSGSF---NRWSEL--LPMSPVEG--CPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 25 ~~~~~f~~~~---~~~~V~l~Gsf---~~W~~~--~~m~~~~~--~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
.+.++|.-+. .|++|+|+||. .+|++. ++|.+... .++.|++++.||+| .++|||++
T Consensus 6 ~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v 73 (108)
T 1ac0_A 6 AVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIR 73 (108)
T ss_dssp CCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEE
T ss_pred eEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEE
Confidence 3566666443 37899999985 589964 58876421 35889999999998 59999999
No 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.72 E-value=9.6e-05 Score=75.55 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=65.8
Q ss_pred eeeEEEEecCC-C-------ceEEEE--EccC---CCCCCCCCCcccCCCCeEEEEEEcCCceE-EEEEEEC--------
Q 010821 25 LIPMRFVWPYG-G-------RSVFLS--GSFN---RWSELLPMSPVEGCPTVFQIIWSIPPGYH-QYKFCVD-------- 82 (500)
Q Consensus 25 ~~~~~f~~~~~-~-------~~V~l~--Gsf~---~W~~~~~m~~~~~~~~~~~~~~~L~~g~~-~ykf~VD-------- 82 (500)
...+||.|... | ++|+|. |..+ +|.+ .+|.|.. ..|+|+.++.||+|-| .|.|+||
T Consensus 30 ~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~~-~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~ 107 (403)
T 3c8d_A 30 MFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRIA-GTDVWQWTTQLNANWRGSYCFIPTERDDIFSA 107 (403)
T ss_dssp EEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEECT-TSSEEEEEEEEETTCEEEEEEEEESCCSTTCC
T ss_pred cEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccCC-CCCeEEEEEEECCCcEEEEEEEecCccccccc
Confidence 46799999876 4 789998 3222 1222 4688753 5799999999999999 9999999
Q ss_pred ----------------CEEeeCCCCCeeeCC-CCCeeeEEEeccCCCC
Q 010821 83 ----------------GEWRHDEHQPFISSE-YGIVNTVLLATEPNFM 113 (500)
Q Consensus 83 ----------------g~w~~d~~~~~~~~~-~g~~nn~l~v~~~~~~ 113 (500)
|..+.||.||..... .|...|++.+.+...+
T Consensus 108 ~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~~ 155 (403)
T 3c8d_A 108 PSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPLQ 155 (403)
T ss_dssp C--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCCC
T ss_pred ccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCcC
Confidence 778899999976543 4888999999876443
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.49 E-value=0.00025 Score=76.57 Aligned_cols=67 Identities=24% Similarity=0.428 Sum_probs=52.5
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEE-cCCceEEEEEEE---CCEE--eeCCCCCeee
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPFIS 95 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V---Dg~w--~~d~~~~~~~ 95 (500)
-++|+ |...|++|.|+|+|++|+.. .+|.+. ..+|+|++.++ +.+|. .|+|.| ||++ ..||-.....
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-~~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-KESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-TTTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-CCCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 46776 99999999999999999754 688763 35699999998 77787 499998 6764 6777666543
No 138
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.40 E-value=0.00022 Score=77.91 Aligned_cols=66 Identities=33% Similarity=0.600 Sum_probs=51.6
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEE-cCCceEEEEEEE---CCEE--eeCCCCCee
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPFI 94 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V---Dg~w--~~d~~~~~~ 94 (500)
-++|. |...|++|.|+|+||+|+.. .+|.+. +..|+|++.++ +.+|. .|||.| ||+| +.||-+...
T Consensus 137 g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~ 210 (722)
T 3k1d_A 137 GVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGT 210 (722)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSB
T ss_pred eEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceee
Confidence 46777 99999999999999999864 588764 23599999997 88885 588888 5654 677776644
No 139
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.39 E-value=0.00022 Score=78.44 Aligned_cols=63 Identities=25% Similarity=0.443 Sum_probs=49.5
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEE-------cCCceEEEEEEEC---CEE--eeCCCCC
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-------IPPGYHQYKFCVD---GEW--RHDEHQP 92 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-------L~~g~~~ykf~VD---g~w--~~d~~~~ 92 (500)
-++|. |...|++|+|+|+||+|+.. .+|.+ ...|+|++.++ +++|.+ |||.|+ |+| +.||-..
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~--~~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEK--DKFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEE--CTTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeecee--CCCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 36776 99999999999999999864 68887 35699999998 677864 888885 455 3477554
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.35 E-value=0.011 Score=47.74 Aligned_cols=64 Identities=16% Similarity=0.278 Sum_probs=47.9
Q ss_pred eEEEEecCCCceEEEEEccC--CCCCC--CCCCcccCCCCeEEEEEEcCCc-eEEEEEEECC--EEeeCCCCC
Q 010821 27 PMRFVWPYGGRSVFLSGSFN--RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCVDG--EWRHDEHQP 92 (500)
Q Consensus 27 ~~~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~~~ykf~VDg--~w~~d~~~~ 92 (500)
.+++.|..++++|+|...+. +|... ++|.+. ..++.++.+++|+.| .++|+|. || .|-.+...-
T Consensus 6 ~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~N 76 (104)
T 2laa_A 6 KVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-EISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTKN 76 (104)
T ss_dssp EEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-TTTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTSC
T ss_pred EEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCcc
Confidence 67788888999999999986 79874 367654 234533699999975 8999995 87 487765543
No 141
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.11 E-value=0.0035 Score=66.73 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=50.1
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEE-cCCceEEEEEEECCE-EeeCCCCCe
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE-WRHDEHQPF 93 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VDg~-w~~d~~~~~ 93 (500)
-++|+ |...|++|.|+|.|+ ..++|.+. .+|+|++.++ +.+|. .|+|.|||. ...||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~--~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD--EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC--TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC--CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 35676 999999999999998 45789874 4699999997 88885 699999996 788887654
No 142
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.97 E-value=0.0046 Score=68.15 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=44.8
Q ss_pred EEEE-ecCCCceEEEEEccCCCCC-----CCCCCcccCCCCeEEEEEE-cC------CceEEEEEEECCEE
Q 010821 28 MRFV-WPYGGRSVFLSGSFNRWSE-----LLPMSPVEGCPTVFQIIWS-IP------PGYHQYKFCVDGEW 85 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-L~------~g~~~ykf~VDg~w 85 (500)
++|. |...|++|.|++ |++|.. .++|.+. .+|+|++.++ +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA--GSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC--STTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccC--CCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 6676 999999999999 988653 3578763 4699999987 66 89999999999854
No 143
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.84 E-value=0.0093 Score=63.81 Aligned_cols=60 Identities=8% Similarity=-0.052 Sum_probs=47.4
Q ss_pred CceeeEEEE-ecCCCceEEE-EEccCCCCC----CCCCCccc--CCCCeEEEEEEcCCceEEEEEEEC
Q 010821 23 TVLIPMRFV-WPYGGRSVFL-SGSFNRWSE----LLPMSPVE--GCPTVFQIIWSIPPGYHQYKFCVD 82 (500)
Q Consensus 23 ~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~----~~~m~~~~--~~~~~~~~~~~L~~g~~~ykf~VD 82 (500)
...+.++|. |.+.+++|.| .|+|++|+. ..+|.+.. +..++|++.++.....+.|||.|.
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 20 ETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 456777885 8889999999 799999975 35888743 123579999998777899999984
No 144
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.76 E-value=0.01 Score=64.38 Aligned_cols=54 Identities=17% Similarity=0.277 Sum_probs=43.5
Q ss_pred eEEEE-ecCCCceEEEEEccCCCC--CCCCCCcccCCCCeEEEEEE-cCCceEEEEEEECCE
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWS--ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE 84 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~--~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VDg~ 84 (500)
-++|. |...|++|.|++ |+++. ..++|.+. .+|+|++.++ +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~--~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGH--SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE--ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC--CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 36776 999999999999 98765 34688763 4699999986 778876 99999884
No 145
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.58 E-value=0.01 Score=63.75 Aligned_cols=62 Identities=23% Similarity=0.383 Sum_probs=49.5
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCCCCeee
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFIS 95 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~~ 95 (500)
-++|+ |...|++|.|+|+ + ..++|.+. ..|+|++.+++.+|.+ |+|.|||..+.||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~--~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL--GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE--ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC--CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 46675 9999999999994 2 35789875 3689999999888886 9999999777888776543
No 146
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.55 E-value=0.026 Score=61.85 Aligned_cols=55 Identities=15% Similarity=0.331 Sum_probs=43.6
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCC-----CCCCCcccCCCCeEEEEEE-cCCceEEEEEEECCEE
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSE-----LLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGEW 85 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VDg~w 85 (500)
-++|. |...|++|.|++ |+.+.. .++|.+. ..|+|++.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~--~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK--TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE--SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC--CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 36776 999999999999 876442 3578763 4699999986 788987 999999854
No 147
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.39 E-value=0.038 Score=60.17 Aligned_cols=68 Identities=22% Similarity=0.503 Sum_probs=49.5
Q ss_pred CceeeEEEEecC-----CCceEEEEEccC---CCCC--------CC-CCCcccCCCCeEEEEEEcCCc-eEEEEEEE-C-
Q 010821 23 TVLIPMRFVWPY-----GGRSVFLSGSFN---RWSE--------LL-PMSPVEGCPTVFQIIWSIPPG-YHQYKFCV-D- 82 (500)
Q Consensus 23 ~~~~~~~f~~~~-----~~~~V~l~Gsf~---~W~~--------~~-~m~~~~~~~~~~~~~~~L~~g-~~~ykf~V-D- 82 (500)
...++++|.-.. -|++|+|+|+-. +|++ .+ +|... ....|++++.||+| .++|||++ |
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~--~~~~W~~~v~l~~~~~~eyKy~~~~~ 656 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAP--NYPDWFYVFSVPAGKTIQFKFFIKRA 656 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCT--TTTSEEEEEEEETTCEEEEEEEEECT
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccC--CCCcEEEEEEeCCCCeEEEEEEEEcC
Confidence 355777777443 478999999886 7998 34 77653 46789999999998 59999998 3
Q ss_pred -C--EEeeCCCCC
Q 010821 83 -G--EWRHDEHQP 92 (500)
Q Consensus 83 -g--~w~~d~~~~ 92 (500)
| .|...++.-
T Consensus 657 ~~~~~We~~~nr~ 669 (686)
T 1qho_A 657 DGTIQWENGSNHV 669 (686)
T ss_dssp TSCEEECCSSCEE
T ss_pred CCCEEeCCCCCee
Confidence 3 365554443
No 148
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=95.22 E-value=0.012 Score=62.92 Aligned_cols=61 Identities=18% Similarity=0.203 Sum_probs=47.9
Q ss_pred CCceeeEEEE-ecCCCceEEE-EEccCCCCC------CCCCCcccC--CCCeEEEEEEcCCceEEEEEEEC
Q 010821 22 DTVLIPMRFV-WPYGGRSVFL-SGSFNRWSE------LLPMSPVEG--CPTVFQIIWSIPPGYHQYKFCVD 82 (500)
Q Consensus 22 ~~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~------~~~m~~~~~--~~~~~~~~~~L~~g~~~ykf~VD 82 (500)
....+.++|+ |.+.+++|.| .|+|++|+. ..+|.+... ..++|++.++.....+.|+|.|+
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 19 DSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 3456888886 9889999999 799999965 468987532 24579999998777889999884
No 149
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.09 E-value=0.12 Score=55.16 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=44.1
Q ss_pred ceeeEEEEecC---CCceEEEEEccC---CCCCC--CCCCcccC--CCCeEEEEEEcCCc-eEEEEEEE
Q 010821 24 VLIPMRFVWPY---GGRSVFLSGSFN---RWSEL--LPMSPVEG--CPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 24 ~~~~~~f~~~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~--~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
..++++|.-.. .|++|+|+|+-. +|++. ++|...+- ++..|++++.||+| .++|||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 45677777443 379999999876 79974 47776420 13789999999998 59999998
No 150
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=94.70 E-value=0.033 Score=60.99 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=47.8
Q ss_pred eEEEE-ecCCCceEEEEEccCCCCCC-CCCCcccCCCCeEEEEEE-cCCceEEEEEEE--CCE--EeeCCCCCe
Q 010821 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV--DGE--WRHDEHQPF 93 (500)
Q Consensus 27 ~~~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V--Dg~--w~~d~~~~~ 93 (500)
-++|+ |...|++|.|++.|++|... ++|.+. ..|+|++.++ +.+| ..|+|.| +|. +..||....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~--~~g~w~~~v~~~~~g-~~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL--EKGVYAVTVTGDLHG-YEYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC--GGGEEEEEEESCCTT-CEEEEEEEETTEEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC--CCCEEEEEECCCCCC-CeEEEEEEeCCeEEEecCCcccc
Confidence 36676 99999999999999988653 689874 3689999987 4556 3566666 476 456876654
No 151
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=94.46 E-value=0.04 Score=62.74 Aligned_cols=66 Identities=17% Similarity=0.147 Sum_probs=49.5
Q ss_pred EEEE-ecCCCceEEEEE-ccCCCCC-CCCCCcccCCCCeEEEEEE-cCCceEEEEEEEC------CE----EeeCCCCCe
Q 010821 28 MRFV-WPYGGRSVFLSG-SFNRWSE-LLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD------GE----WRHDEHQPF 93 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~G-sf~~W~~-~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VD------g~----w~~d~~~~~ 93 (500)
++|. |...|++|.|++ +|++|.. .++|.+. ...|+|++.++ +.+|.+ |+|.|+ |. ...||....
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~ 383 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHS 383 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeEC-CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccce
Confidence 5666 999999999999 9999975 3688753 24689999986 778865 777775 43 477877764
Q ss_pred ee
Q 010821 94 IS 95 (500)
Q Consensus 94 ~~ 95 (500)
..
T Consensus 384 ~~ 385 (1083)
T 2fhf_A 384 LS 385 (1083)
T ss_dssp BC
T ss_pred ec
Confidence 43
No 152
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=94.36 E-value=0.093 Score=57.05 Aligned_cols=59 Identities=24% Similarity=0.420 Sum_probs=45.7
Q ss_pred CceeeEEEEecC----CCceEEEEEccC---CCCCC--C-CCCcc-cCCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 23 ~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
...++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||+| .++|||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 356888888644 489999999877 89974 4 66651 0246799999999988 79999998
No 153
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=93.89 E-value=0.096 Score=56.98 Aligned_cols=58 Identities=29% Similarity=0.408 Sum_probs=45.6
Q ss_pred ceeeEEEEecC----CCceEEEEEccC---CCCCC--C-CCCcc-cCCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 24 VLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 24 ~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
..++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||+| .++|||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 56888898654 379999999887 89964 4 67651 0246799999999988 79999997
No 154
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=93.51 E-value=0.051 Score=60.88 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=39.3
Q ss_pred EEEE-ecCCCceEEEEEccCCCCCCC--CCCcccCCCCeEEEEEE-cCCceEEEEEEECC
Q 010821 28 MRFV-WPYGGRSVFLSGSFNRWSELL--PMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDG 83 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~Gsf~~W~~~~--~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VDg 83 (500)
++|. |...|++|.|++-+++|.+.. .|.+ +.+|+|++.++ +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~--~~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLK--ESNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECE--EETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeec--CCCCEEEEEECCCCCCC-EEEEEEeC
Confidence 6777 999999999999666666543 2333 35799999987 56675 48888875
No 155
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=93.49 E-value=0.039 Score=61.52 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=49.6
Q ss_pred EEEE-ecCCCceEEEEE-ccCCCCC---CCCCCcccCCCCeEEEEEEcCCce-----EEEEEEEC--CE--EeeCCCCCe
Q 010821 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIPPGY-----HQYKFCVD--GE--WRHDEHQPF 93 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~~g~-----~~ykf~VD--g~--w~~d~~~~~ 93 (500)
++|. |...|++|.|++ ++++|.. .++|.+ ..+|+|++.+.+.+|. +.|+|.|+ |. ...||-+..
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~--~~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVK--NNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEE--CTTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeecccc--CCCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 6777 999999999998 7888863 468877 3579999999877762 67888885 33 577887754
Q ss_pred e
Q 010821 94 I 94 (500)
Q Consensus 94 ~ 94 (500)
+
T Consensus 224 ~ 224 (877)
T 3faw_A 224 L 224 (877)
T ss_dssp B
T ss_pred c
Confidence 3
No 156
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=93.40 E-value=0.024 Score=60.58 Aligned_cols=59 Identities=15% Similarity=0.243 Sum_probs=45.5
Q ss_pred CceeeEEEE-ecCCCceEEE-EEccCCCCC---CCCCCcccC--CCCeEEEEEEcCCceEEEEEEE
Q 010821 23 TVLIPMRFV-WPYGGRSVFL-SGSFNRWSE---LLPMSPVEG--CPTVFQIIWSIPPGYHQYKFCV 81 (500)
Q Consensus 23 ~~~~~~~f~-~~~~~~~V~l-~Gsf~~W~~---~~~m~~~~~--~~~~~~~~~~L~~g~~~ykf~V 81 (500)
...+.++|+ |.+.+++|.| .|+|++|.. ..+|.+... ..|+|++.++.....+.|||.|
T Consensus 20 ~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i 85 (583)
T 1ea9_C 20 GTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLL 85 (583)
T ss_dssp SSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCC
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEE
Confidence 445677775 9889999999 799999975 358887432 2457999998777778888887
No 157
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=93.40 E-value=0.12 Score=54.07 Aligned_cols=58 Identities=12% Similarity=0.175 Sum_probs=43.8
Q ss_pred CceeeEEEEecC----CCceEEEEEccC---CCCCCC---CCCcccCCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSELL---PMSPVEGCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 23 ~~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~~---~m~~~~~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
...++++|.-.. -|++|+|+||-. +|++.. +|... ..++.|++++.||+| .++|||++
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-SHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-TTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-CCCCEEEEEEEECCCCcEEEEEEE
Confidence 345788887433 489999999876 799763 45442 234599999999998 59999998
No 158
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=93.08 E-value=0.17 Score=55.12 Aligned_cols=58 Identities=28% Similarity=0.425 Sum_probs=45.2
Q ss_pred ceeeEEEEecC----CCceEEEEEccC---CCCCC--C-CCCcc-cCCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 24 VLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 24 ~~~~~~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
..++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||+| .++|||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 56888888544 489999999877 89974 4 56541 0245799999999988 79999997
No 159
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=92.78 E-value=0.11 Score=58.47 Aligned_cols=62 Identities=19% Similarity=0.191 Sum_probs=45.7
Q ss_pred EEEE-ecCCCceEEEEEccCCCC----CCCCCCcccCCCCeEEEEEE-cCCceEEEEEEE--CCE--EeeCCCCCe
Q 010821 28 MRFV-WPYGGRSVFLSGSFNRWS----ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV--DGE--WRHDEHQPF 93 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~Gsf~~W~----~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V--Dg~--w~~d~~~~~ 93 (500)
++|+ |...|++|.|++ |++|. ..++|.+. ..|+|++.++ +.+|. .|+|.| +|. +..||-...
T Consensus 327 v~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 327 TSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS--DNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC--GGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred EEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC--CCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 5665 999999999997 99995 24688874 3689999987 55665 377766 564 466776653
No 160
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=92.76 E-value=0.13 Score=56.20 Aligned_cols=65 Identities=11% Similarity=0.138 Sum_probs=48.0
Q ss_pred EEEE-ecCCCceEEEEE-ccCCCCC---CCCCCcccCCCCeEEEEEEcC--Cc-----eEEEEEEEC--CE--EeeCCCC
Q 010821 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GE--WRHDEHQ 91 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~~~ykf~VD--g~--w~~d~~~ 91 (500)
++|. |...|++|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |. ...||-+
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC--CCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 6676 999999999999 8998864 4688873 469999998731 34 267888885 54 4578766
Q ss_pred Cee
Q 010821 92 PFI 94 (500)
Q Consensus 92 ~~~ 94 (500)
..+
T Consensus 104 ~~~ 106 (714)
T 2ya0_A 104 KSL 106 (714)
T ss_dssp SEE
T ss_pred eee
Confidence 543
No 161
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=91.57 E-value=0.22 Score=53.34 Aligned_cols=62 Identities=23% Similarity=0.358 Sum_probs=47.5
Q ss_pred EEEE-ecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEE-cCCceEEEEEEEC-CEEeeCCCCCeeeC
Q 010821 28 MRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD-GEWRHDEHQPFISS 96 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~VD-g~w~~d~~~~~~~~ 96 (500)
++|. |...|++|.|++ +|.. .+|.+. .+|+|++.++ +.+|. .|+|.|+ |....||.......
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~~-~~m~~~--~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~~ 108 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGKD-QEMQAN--GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQKT 108 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTEE-EECEEC--STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBSS
T ss_pred EEEEEECCCCCEEEEEE---CCCc-ccCeec--CCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeeec
Confidence 6777 999999999998 3543 689874 4689999885 77776 5899995 56888887765433
No 162
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=91.22 E-value=0.17 Score=54.51 Aligned_cols=56 Identities=11% Similarity=0.167 Sum_probs=41.1
Q ss_pred eEEEE-e----cCCCceEEEEEccCCCCC-CCCCCc--cc--CCCCeEEEEEEcCCceEEEEEEECC
Q 010821 27 PMRFV-W----PYGGRSVFLSGSFNRWSE-LLPMSP--VE--GCPTVFQIIWSIPPGYHQYKFCVDG 83 (500)
Q Consensus 27 ~~~f~-~----~~~~~~V~l~Gsf~~W~~-~~~m~~--~~--~~~~~~~~~~~L~~g~~~ykf~VDg 83 (500)
.++|+ | ...|++|.|++.|++ .. .++|.+ .. +..|+|++.++.......|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 45665 7 667999999999974 32 368876 32 2347999999876666789999965
No 163
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=89.97 E-value=0.25 Score=56.11 Aligned_cols=63 Identities=13% Similarity=0.195 Sum_probs=46.3
Q ss_pred EEEE-ecCCCceEEEEE-ccCCCCC---CCCCCcccCCCCeEEEEEEcC--Cc-----eEEEEEEEC--CE--EeeCCCC
Q 010821 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GE--WRHDEHQ 91 (500)
Q Consensus 28 ~~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~~~ykf~VD--g~--w~~d~~~ 91 (500)
++|. |...|++|.|++ +|++|.. .++|.+ ...|+|++.++-. +| -+.|+|.|+ |. ...||-+
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~--~~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEK--GERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEE--CGGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEeccc--CCCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 6776 999999999999 8998864 468887 3468999998741 23 256788885 53 4677765
Q ss_pred C
Q 010821 92 P 92 (500)
Q Consensus 92 ~ 92 (500)
.
T Consensus 411 ~ 411 (1014)
T 2ya1_A 411 K 411 (1014)
T ss_dssp S
T ss_pred e
Confidence 4
No 164
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=88.32 E-value=0.71 Score=51.85 Aligned_cols=60 Identities=27% Similarity=0.512 Sum_probs=43.4
Q ss_pred eeeEEEEecCCCceEEEEEcc-------CCCCCCC---CCCcccCCCCeEEEEEEcCCceEEEEEEECCEEe
Q 010821 25 LIPMRFVWPYGGRSVFLSGSF-------NRWSELL---PMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (500)
Q Consensus 25 ~~~~~f~~~~~~~~V~l~Gsf-------~~W~~~~---~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~ 86 (500)
.+|+..--...+..+.+.|+| .+|++.. -|.+. .+|.|+.+-.||+|.|+||+.++|.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~--~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 152 KIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKI--NPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp EECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEE--ETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccccchhhhccccccCCCCCCcceeecc--CCcceeeeeccCCcceeEEEeecCccc
Confidence 445544444556678888876 4688764 23332 368999999999999999999997773
No 165
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=87.59 E-value=0.47 Score=43.69 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=40.3
Q ss_pred CceEEEEEccCCCCCC--CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEe
Q 010821 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (500)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~ 86 (500)
.+++||+|++++|... .+|.+....++.|...+.|+.|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 5789999999998743 47877666689999999998775 89999765553
No 166
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=86.79 E-value=1.2 Score=35.54 Aligned_cols=63 Identities=16% Similarity=0.402 Sum_probs=43.9
Q ss_pred eEEEEecCCCceEEEEEccC--CCCCC--CCCCcccCCCCeEEEEEEcCCc-eEEEEEEECC--EEeeCCCC
Q 010821 27 PMRFVWPYGGRSVFLSGSFN--RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCVDG--EWRHDEHQ 91 (500)
Q Consensus 27 ~~~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~~~ykf~VDg--~w~~d~~~ 91 (500)
.+++.|..++.+|+|-=.+. +|... ++|.+. .+.|.|..++.|+.+ .++|+| -|| .|-.+...
T Consensus 11 ~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 11 DITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp SEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred EEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-ccCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 44555557889999886675 48763 467653 267888999999864 788888 565 58665433
No 167
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=86.65 E-value=0.13 Score=54.12 Aligned_cols=57 Identities=21% Similarity=0.406 Sum_probs=0.0
Q ss_pred ceeeEEEEe-cC---CCceEEEEEccC---CCCCC--CCCCcccCCCCeEEEEEEcCCc-eEEEEEEE
Q 010821 24 VLIPMRFVW-PY---GGRSVFLSGSFN---RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCV 81 (500)
Q Consensus 24 ~~~~~~f~~-~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~~~ykf~V 81 (500)
..++++|.- .. .|++|+|+||-. +|++. ++|... .....|++++.||+| .++|||+|
T Consensus 429 ~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 429 ALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-SGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-CCCCeEEEEEEeCCCCcEEEEEEE
Confidence 457778774 22 389999999887 79874 577631 235789999999998 59999997
No 168
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.76 E-value=8.4 Score=33.12 Aligned_cols=66 Identities=17% Similarity=0.235 Sum_probs=42.9
Q ss_pred CceEEEEEccCCCCCCC--CCCccc-----CCCCeEEEEEEcCC-----c--eEEEEEEECCEEeeCCCCCeeeCCCCCe
Q 010821 36 GRSVFLSGSFNRWSELL--PMSPVE-----GCPTVFQIIWSIPP-----G--YHQYKFCVDGEWRHDEHQPFISSEYGIV 101 (500)
Q Consensus 36 ~~~V~l~Gsf~~W~~~~--~m~~~~-----~~~~~~~~~~~L~~-----g--~~~ykf~VDg~w~~d~~~~~~~~~~g~~ 101 (500)
.++|+|.=+|++|+... ++.... .....|+..+.||+ + .+-.+|.|+|+ .-.|.+++.
T Consensus 60 eK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~--------eyWDNN~G~ 131 (156)
T 2eef_A 60 EKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ--------TYWDSNRGK 131 (156)
T ss_dssp CCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE--------EEEESGGGS
T ss_pred CcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC--------EEecCCCCe
Confidence 58999999999998642 333221 12358999999886 2 46678889984 223444455
Q ss_pred eeEEEecc
Q 010821 102 NTVLLATE 109 (500)
Q Consensus 102 nn~l~v~~ 109 (500)
|=.+...+
T Consensus 132 NY~v~~~~ 139 (156)
T 2eef_A 132 NYRIIRAE 139 (156)
T ss_dssp CCCEEETT
T ss_pred eEEEEEEE
Confidence 55555543
No 169
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=63.59 E-value=7.2 Score=39.92 Aligned_cols=46 Identities=13% Similarity=0.219 Sum_probs=35.7
Q ss_pred CceEEEEEccCCCCCC--CCCCcccCCCCeEEEEEEcCCceEEEEEEEC
Q 010821 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVD 82 (500)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VD 82 (500)
....||+|++++|... .+|.+....++.|+....+..+. +|||.--
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeec
Confidence 3568999999999864 35656556678999999987765 7999864
No 170
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=61.68 E-value=20 Score=28.54 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=33.5
Q ss_pred CceEEEEEc--cCCCCC-CC--CCCcc----cCCCCeEEEEEEcCCc-eEEEEEEECCE
Q 010821 36 GRSVFLSGS--FNRWSE-LL--PMSPV----EGCPTVFQIIWSIPPG-YHQYKFCVDGE 84 (500)
Q Consensus 36 ~~~V~l~Gs--f~~W~~-~~--~m~~~----~~~~~~~~~~~~L~~g-~~~ykf~VDg~ 84 (500)
.|.|.|.=+ |++|+. .. +..-. ...-..|+..+.||+- .+--+|.|+|+
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 377888877 999998 32 11111 1234589999999764 56678889985
No 171
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=53.96 E-value=26 Score=27.97 Aligned_cols=61 Identities=18% Similarity=0.279 Sum_probs=43.0
Q ss_pred CCceeeEEEEecCCC---ceEEEEE-ccCCCCCCCCCCcccCCCCeEEEEEE-cCCceEEEEEEE-CCEEeeC
Q 010821 22 DTVLIPMRFVWPYGG---RSVFLSG-SFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV-DGEWRHD 88 (500)
Q Consensus 22 ~~~~~~~~f~~~~~~---~~V~l~G-sf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V-Dg~w~~d 88 (500)
.+.-.-+.+.+-+|+ ..|.|.| +=++|. +|.+. +..|+..-. .+.|-+.||+.. ||+|...
T Consensus 24 np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 24 DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 345566677777664 6689996 667886 57774 578997751 245788888888 7887765
No 172
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=49.23 E-value=27 Score=26.09 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCcEEEEEeHHHHHHHHHcc
Q 010821 390 VSSIPIVDDNDSLLDIYCRSDITALAKDK 418 (500)
Q Consensus 390 ~~~lpVvd~~g~lvGiis~~Di~~~~~~~ 418 (500)
...+=++|++|+.+|+++..+.+.++.+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 45577899999999999999999887664
No 173
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=48.71 E-value=14 Score=36.24 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=38.3
Q ss_pred CceEEEEEccCCCCCC--CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEe
Q 010821 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (500)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~ 86 (500)
....||+|++.+|... .+|.+....+|.|.....|+.| ..|||.-...|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCc
Confidence 4789999999976543 4677766668999999999776 578998765554
No 174
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=48.25 E-value=18 Score=29.72 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=19.3
Q ss_pred EEEcCCc-eEEEEEEECCEEeeCCCC
Q 010821 67 IWSIPPG-YHQYKFCVDGEWRHDEHQ 91 (500)
Q Consensus 67 ~~~L~~g-~~~ykf~VDg~w~~d~~~ 91 (500)
.+.|..| .|.|+| ++|+|+.+.+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 3567788 799999 99999988653
No 175
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.24 E-value=20 Score=36.51 Aligned_cols=54 Identities=24% Similarity=0.482 Sum_probs=38.6
Q ss_pred CceEEEEEccCCCCCC-------CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEEeeCCC
Q 010821 36 GRSVFLSGSFNRWSEL-------LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEH 90 (500)
Q Consensus 36 ~~~V~l~Gsf~~W~~~-------~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d~~ 90 (500)
...++++|++++|... .+|.+....++.|...+.+..| .+|||.-++.|-.+..
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~G 320 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDFG 320 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCBC
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCcccccc
Confidence 4679999999987532 1344444567899998887654 5889999888866543
No 176
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=40.25 E-value=11 Score=25.83 Aligned_cols=13 Identities=46% Similarity=0.864 Sum_probs=11.0
Q ss_pred ECCEEeeCCCCCe
Q 010821 81 VDGEWRHDEHQPF 93 (500)
Q Consensus 81 VDg~w~~d~~~~~ 93 (500)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6899999998764
No 177
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=34.37 E-value=35 Score=36.31 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=37.1
Q ss_pred ceeeEEEE-ecCCCceEEEEEccCCCCCCCCCCcccCCCC---eEEEEEEcCCceEEEEEEE
Q 010821 24 VLIPMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPT---VFQIIWSIPPGYHQYKFCV 81 (500)
Q Consensus 24 ~~~~~~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~---~~~~~~~L~~g~~~ykf~V 81 (500)
..+-++|. +++...+|.+.|. ...||.+.. +++ .|++.++.+.....|+|.|
T Consensus 123 ~~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~-~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 123 GRVHVLLRTQKGVIKGATFLGE-----KHVPMRKKA-SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp TEEEEEEEEETTTEEEEEEESS-----SEEECEEEE-ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred CeEEEEEEcccCCcceEEEeCC-----CEEEEEEEe-cCCCeEEEEEEEECCCCceEEEEEE
Confidence 34566776 4445688888764 447898753 344 4889998888888999988
No 178
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=33.00 E-value=18 Score=25.05 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=10.6
Q ss_pred ECCEEeeCCCCCe
Q 010821 81 VDGEWRHDEHQPF 93 (500)
Q Consensus 81 VDg~w~~d~~~~~ 93 (500)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999998763
No 179
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=32.78 E-value=12 Score=25.27 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.3
Q ss_pred ECCEEeeCCCCCe
Q 010821 81 VDGEWRHDEHQPF 93 (500)
Q Consensus 81 VDg~w~~d~~~~~ 93 (500)
|||+|.+|+.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6899999987653
No 180
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=30.98 E-value=18 Score=32.74 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=34.3
Q ss_pred ceEEEEEc--cCCCCCC--CCCCcccCCCCeEEEEEEcCCceEEEEEEECCEE
Q 010821 37 RSVFLSGS--FNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEW 85 (500)
Q Consensus 37 ~~V~l~Gs--f~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VDg~w 85 (500)
.+|+|+|+ -++|... .+|......++.|.....|..|.++|+|..+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 5689754 3555333457889888999999877776555333
No 181
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=30.20 E-value=21 Score=30.49 Aligned_cols=35 Identities=37% Similarity=0.676 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 010821 460 LHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 496 (500)
Q Consensus 460 L~~a~~~m~~~~~~~l~VVd~~~g~liGiIS~~DIl~ 496 (500)
+.+.++.+...+..-++|-. +++++|+|.+.|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 77788889999988888877 599999999988653
No 182
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=27.51 E-value=82 Score=23.49 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=21.4
Q ss_pred CCCEEEEEeCCCCeEEEEEehHHHHHH
Q 010821 471 GVRRLVIVEAGSKRVEGIVSLSDIFKF 497 (500)
Q Consensus 471 ~~~~l~VVd~~~g~liGiIS~~DIl~~ 497 (500)
+.+.+=+|++ +|..+|+++..+.++.
T Consensus 12 r~~eVrli~~-~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 12 RAREVRLIDQ-NGDQLGIKSKQEALEI 37 (78)
T ss_dssp CCSEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CCCEEEEECC-CCcCCCcccHHHHHHH
Confidence 3466779995 8999999999998875
No 183
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=27.07 E-value=25 Score=23.81 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=12.5
Q ss_pred EEEEC-CEEeeCCCCCe
Q 010821 78 KFCVD-GEWRHDEHQPF 93 (500)
Q Consensus 78 kf~VD-g~w~~d~~~~~ 93 (500)
..-|| |+|.+|+...+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 45677 99999998764
No 184
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=25.62 E-value=28 Score=24.93 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.4
Q ss_pred ECCEEeeCCCCCe
Q 010821 81 VDGEWRHDEHQPF 93 (500)
Q Consensus 81 VDg~w~~d~~~~~ 93 (500)
|||+|.+|+.-.+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999987763
No 185
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=24.50 E-value=43 Score=26.60 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=14.2
Q ss_pred CCceEEEEEEECCEEeeCCCC
Q 010821 71 PPGYHQYKFCVDGEWRHDEHQ 91 (500)
Q Consensus 71 ~~g~~~ykf~VDg~w~~d~~~ 91 (500)
|-|-|+|.|. +|.|+++-+.
T Consensus 65 p~sG~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 65 KQGGYHFDLK-GDEWICDRSG 84 (106)
T ss_dssp SSCEEEEEEE-TTEEEETTTC
T ss_pred CCCceeeeec-CCEEEECCCC
Confidence 3333888885 8999987654
No 186
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=24.26 E-value=2e+02 Score=22.39 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=42.0
Q ss_pred CceeeEEEEecCCC---ceEEEEEccC-CCCCCCCCCcccCCCCeEEEEEE-cCCceEEEEEEE-CCEEeeC
Q 010821 23 TVLIPMRFVWPYGG---RSVFLSGSFN-RWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV-DGEWRHD 88 (500)
Q Consensus 23 ~~~~~~~f~~~~~~---~~V~l~Gsf~-~W~~~~~m~~~~~~~~~~~~~~~-L~~g~~~ykf~V-Dg~w~~d 88 (500)
+.-.-+.+.+.+|+ ..|.|.|+=+ +|. +|.+ - +..|+..-. ...|-+.||+.. ||+|...
T Consensus 14 ~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~r-w--Ga~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 14 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK-K--GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TTEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEE-E--TTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred cceEEEEEEEcCCCccEEEEEEEeCCCCCeE---Eecc-c--CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 34556677777765 5688999976 686 5776 3 468988752 345788888887 8877654
No 187
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=24.18 E-value=3.2e+02 Score=23.37 Aligned_cols=71 Identities=14% Similarity=0.333 Sum_probs=43.0
Q ss_pred eEEEEecCCCce------EEEEEccCCCCCCCCCCccc------------CCCCeEEEEEEcCCceEEEEEEECCEEeeC
Q 010821 27 PMRFVWPYGGRS------VFLSGSFNRWSELLPMSPVE------------GCPTVFQIIWSIPPGYHQYKFCVDGEWRHD 88 (500)
Q Consensus 27 ~~~f~~~~~~~~------V~l~Gsf~~W~~~~~m~~~~------------~~~~~~~~~~~L~~g~~~ykf~VDg~w~~d 88 (500)
+++|+|...|.+ +||+ =.+|++..||.+.+ ..++.++..+.||.++--| ++|=..|...
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG~-hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYIT--KNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKGY-HVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCEE-EEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEc--CCCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCccC-EEEEEEEEec
Confidence 578999888643 6665 45788877887532 1134677777777543221 2455678887
Q ss_pred CCCCeeeCCCCCeeeEEEe
Q 010821 89 EHQPFISSEYGIVNTVLLA 107 (500)
Q Consensus 89 ~~~~~~~~~~g~~nn~l~v 107 (500)
+. ...+.|++.|
T Consensus 152 Dt-------~eaFY~csDV 163 (166)
T 4a02_A 152 DT-------VNAFYQAIDV 163 (166)
T ss_dssp SS-------SEEEEEEEEE
T ss_pred CC-------CCCCEEEEEE
Confidence 54 1235566655
No 188
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=23.71 E-value=2.2e+02 Score=24.55 Aligned_cols=72 Identities=14% Similarity=0.289 Sum_probs=43.4
Q ss_pred eEEEEecCCCce------EEEEEccCCCCCCCCCCccc--------------CCCCeEEEEEEcCCceEEEEEEECCEEe
Q 010821 27 PMRFVWPYGGRS------VFLSGSFNRWSELLPMSPVE--------------GCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (500)
Q Consensus 27 ~~~f~~~~~~~~------V~l~Gsf~~W~~~~~m~~~~--------------~~~~~~~~~~~L~~g~~~ykf~VDg~w~ 86 (500)
+++|+|...|.+ +||+ =.+|++..||.+.+ ..++.++..+.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFIT--KPNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEEC--CCCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 689999888633 6664 35677776776431 1124677778888754433 45556788
Q ss_pred eCCCCCeeeCCCCCeeeEEEec
Q 010821 87 HDEHQPFISSEYGIVNTVLLAT 108 (500)
Q Consensus 87 ~d~~~~~~~~~~g~~nn~l~v~ 108 (500)
..+.. ..+.|++.|.
T Consensus 153 ~~Dt~-------eaFY~c~DV~ 167 (170)
T 2bem_A 153 IADTA-------NAFYQAIDVN 167 (170)
T ss_dssp ESSSS-------EEEEEEEEEE
T ss_pred eccCC-------CCCEEEEEEE
Confidence 87511 2356666653
No 189
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=21.49 E-value=30 Score=25.32 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=10.7
Q ss_pred ECCEEeeCCCCCe
Q 010821 81 VDGEWRHDEHQPF 93 (500)
Q Consensus 81 VDg~w~~d~~~~~ 93 (500)
|||+|.+|+.-.+
T Consensus 52 vdgeWsYD~ATkT 64 (83)
T 1pgx_A 52 VDGVWTYDDATKT 64 (83)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCceEeeccccee
Confidence 5899999998764
No 190
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=21.13 E-value=68 Score=34.45 Aligned_cols=56 Identities=18% Similarity=0.169 Sum_probs=36.1
Q ss_pred ceeeEEEEecCCCceEEEEEccCCCCCCCCCCcccCCCCeEEEEEEcCCceEEEEEEEC
Q 010821 24 VLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVD 82 (500)
Q Consensus 24 ~~~~~~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~~~ykf~VD 82 (500)
..+.++|.=+.+..+|.|...-..|.. .|....+....|+++++ +.+.+.|.|.++
T Consensus 132 ~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~ 187 (696)
T 4aee_A 132 GEIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFN 187 (696)
T ss_dssp TEEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEE
T ss_pred CEEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEE
Confidence 567777773346777777654444432 23222223358999999 778899999984
No 191
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=20.90 E-value=49 Score=23.78 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=14.9
Q ss_pred EccCCCCCCCCCCcccCCCCeEEEEEEcCCc
Q 010821 43 GSFNRWSELLPMSPVEGCPTVFQIIWSIPPG 73 (500)
Q Consensus 43 Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g 73 (500)
|||.+|+.. .| +. .++.-+..+.+|.|
T Consensus 1 ~~~s~W~qP-~l-k~--~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQP-EL-ES--DEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCCC-EE-EE--ETTEEEEEEECCSS
T ss_pred CCcccccCc-ee-ec--CCCCceEEEeCCCC
Confidence 799999873 33 32 34667777877777
No 192
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=20.43 E-value=1e+02 Score=22.41 Aligned_cols=29 Identities=24% Similarity=0.329 Sum_probs=20.6
Q ss_pred EEEEEEcCCceEEEEEEE---CCE--EeeCCCCC
Q 010821 64 FQIIWSIPPGYHQYKFCV---DGE--WRHDEHQP 92 (500)
Q Consensus 64 ~~~~~~L~~g~~~ykf~V---Dg~--w~~d~~~~ 92 (500)
|.+.-.+|+|.|+--++. ||. ..+||.+-
T Consensus 42 Fyaeev~paG~Ye~d~~~~V~dgRlef~~Dprq~ 75 (78)
T 1pfs_A 42 FFVESVIPAGSYQVPYRINVNNGRPELAFDFKAM 75 (78)
T ss_dssp EECSSCCCSEEEEEEEEEEEETTEEEEEECTTSC
T ss_pred eeeccCCCCCceecceEeeecCCcEEEEeChHHh
Confidence 555545788999988886 784 56777653
Done!