Query 010822
Match_columns 500
No_of_seqs 172 out of 525
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 04:57:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4683 Uncharacterized conser 100.0 2E-101 5E-106 777.8 22.0 413 52-500 133-549 (549)
2 COG4299 Uncharacterized protei 100.0 4.9E-82 1.1E-86 619.0 23.5 360 60-500 5-371 (371)
3 PF07786 DUF1624: Protein of u 99.8 1.7E-19 3.8E-24 174.8 12.8 187 62-349 1-192 (223)
4 COG3503 Predicted membrane pro 98.7 2E-07 4.4E-12 94.7 12.2 251 61-431 14-295 (323)
5 PF10129 OpgC_C: OpgC protein; 98.6 6.1E-06 1.3E-10 86.8 22.7 76 62-147 1-80 (358)
6 COG2311 Predicted membrane pro 98.4 9.9E-06 2.1E-10 85.9 16.9 133 58-231 8-158 (394)
7 PF06423 GWT1: GWT1; InterPro 98.4 3.4E-06 7.3E-11 77.3 11.5 119 318-439 2-134 (136)
8 PF01757 Acyl_transf_3: Acyltr 98.2 7.6E-05 1.7E-09 72.3 18.1 81 64-149 2-88 (340)
9 PRK10835 hypothetical protein; 98.1 0.0008 1.7E-08 71.2 22.6 76 66-152 1-92 (373)
10 PRK03854 opgC glucans biosynth 97.1 0.12 2.6E-06 54.2 22.5 88 57-152 3-101 (375)
11 PF04235 DUF418: Protein of un 96.5 0.045 9.9E-07 50.8 12.2 90 346-437 11-105 (163)
12 COG3594 NolL Fucose 4-O-acetyl 94.6 1.3 2.9E-05 46.7 15.8 58 377-441 228-286 (343)
13 COG4645 Uncharacterized protei 91.2 0.09 2E-06 55.1 1.2 79 60-147 21-102 (410)
14 PF15345 TMEM51: Transmembrane 87.4 0.48 1E-05 47.3 3.0 58 355-412 9-88 (233)
15 COG3274 Predicted O-acyltransf 82.1 24 0.00051 37.3 12.6 72 60-139 2-80 (332)
16 PRK05771 V-type ATP synthase s 56.2 26 0.00057 39.9 6.8 69 316-403 343-411 (646)
17 COG5062 Uncharacterized membra 53.5 94 0.002 33.5 9.6 268 60-431 108-379 (429)
18 COG1835 Predicted acyltransfer 43.6 6 0.00013 41.7 -0.8 49 381-431 263-311 (386)
19 COG3619 Predicted membrane pro 41.8 65 0.0014 32.4 6.2 58 95-154 48-105 (226)
20 PF07786 DUF1624: Protein of u 35.9 89 0.0019 30.2 6.0 19 413-431 203-221 (223)
21 KOG2532 Permease of the major 35.2 3E+02 0.0065 30.4 10.6 125 318-455 294-425 (466)
22 PF13828 DUF4190: Domain of un 29.1 98 0.0021 24.9 4.2 49 321-369 9-58 (62)
23 KOG3700 Predicted acyltransfer 24.7 6.7E+02 0.014 29.4 11.5 65 61-129 267-341 (705)
24 TIGR02230 ATPase_gene1 F0F1-AT 21.0 2.9E+02 0.0062 24.4 5.9 28 317-344 39-68 (100)
No 1
>KOG4683 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.4e-101 Score=777.83 Aligned_cols=413 Identities=38% Similarity=0.680 Sum_probs=371.7
Q ss_pred HhHhhhhcccchhhhhhhhhhhHhhhccceEEEEcCCCCCCCcccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCCCh
Q 010822 52 LQQLLQQKSKRVATLDAFRGLTVVWVYTQLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKI 131 (500)
Q Consensus 52 ~~~~~~~~~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~ 131 (500)
+..+.+..++|+.|||+|||+||+ +||+||++||.||.++|||||||++||+|||||||||||||++|+|+..+|
T Consensus 133 ~~rsla~~r~RL~SLD~FRGltVa-----lMIlVdd~GG~~p~I~HapWnG~~LADfVmPfFLfIvGVsials~K~~s~r 207 (549)
T KOG4683|consen 133 EARSLATQRKRLRSLDTFRGLTVA-----LMILVDDGGGGYPWIEHAPWNGLHLADFVMPFFLFIVGVSIALSVKSQSSR 207 (549)
T ss_pred hhhhcCCCchhhhhhhhhcCceEE-----EEEEEecCCCCchhhhcCCcCCccHHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 455556667899999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCcCCcccccchHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhh
Q 010822 132 NGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIF 211 (500)
Q Consensus 132 ~~~~~kil~Rsl~LfllGl~l~~~~~~~~~~~~~~~d~~~iR~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~~~ 211 (500)
.++.||+..|+.+|+++|+++||+|.|.+++++|++|.+++|+||||||+|++|+++|++.+++.+.. +++
T Consensus 208 f~a~rKa~~R~cklllwgLflqGgf~h~~~nLTygidve~lR~mGILQr~~~ayLVvAi~~~~~~~~~--~~~------- 278 (549)
T KOG4683|consen 208 FSATRKAKARICKLLLWGLFLQGGFLHSMSNLTYGIDVEQLRIMGILQRFGVAYLVVAILHTLCCRPI--SPQ------- 278 (549)
T ss_pred hhHhHHHHHHHHHHHHHHHHHhhhcccCcccccCCccHHHHHHHHHHHHhhHHHHHHHHHhhhccCCC--ccc-------
Confidence 99999999999999999999999999999999999999999999999999999999999998776522 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccCCCCcccc---CCCCcceeeeccCCCCCCCC-CCCHHHHHHHHhcCCCCccCCc
Q 010822 212 TAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEH---SDHGVKKYIVKCGMRGHLGP-ACNAVGYVDRELWGINHLYSDP 287 (500)
Q Consensus 212 ~~~~~q~~~~~~ll~~y~~l~~~l~vP~~~~~~~---~~~~~~~~~~~~g~~g~l~~-~~N~a~~iDr~vlG~~HlY~~p 287 (500)
..||-+++...+..|-+..++.+||+|.+... .|+.|+.|.++||.++...+ .||+++|.||+++|.+|||++|
T Consensus 279 --~S~~R~V~~~~L~~~~~~~~~~~V~~~~~~~~~~~~~~~~r~~~~~~G~~~~~~~P~CnAvGy~DrqvLGi~HiY~hP 356 (549)
T KOG4683|consen 279 --RSWQRAVHDVCLFSGELAVLLALVATYLGLTFGLRVPGCPRGYLGPGGKHDYNAHPKCNAVGYADRQVLGIAHIYQHP 356 (549)
T ss_pred --cchhhhhhHHHHHHHHHHHHHHhhhhhhceecccccCCCCcccccCCcccccCCCCCccchhhhHHhhhhhHHHhcCc
Confidence 12555677777777877777778887765433 35557778888888888765 5999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCCcccCCCCCcchhhhhHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Q 010822 288 VWSRLEACTLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAI 367 (500)
Q Consensus 288 ~~~~~~~c~~~~~~~g~~~~~~~~~~~~~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~~rl~~~l~~G~~llilG~ 367 (500)
+|||.|+||+|+|++||+++|+|+||.+|||||||||+|.|++++++|+++|+++.+.+++..|+++|+..+.++.++|.
T Consensus 357 ~~~r~k~cs~n~P~nG~l~~DAPSWCqapFdPEGilssi~avv~~llG~h~Ghiilh~k~~~sRir~wis~~~~l~llg~ 436 (549)
T KOG4683|consen 357 TAKRVKDCSINYPNNGPLPPDAPSWCQAPFDPEGILSSILAVVQVLLGAHAGHIILHHKNFQSRIRRWISLAILLGLLGG 436 (549)
T ss_pred hHHHhhhcccCCCCCCCCCCCCchhhcCCCChHHHHHHHHHHHHHHHHhhcCeEEEEccchHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhhccceecC
Q 010822 368 ILHFTNAIPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFVNGWYYKN 447 (500)
Q Consensus 368 ll~~~~~~PiNK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nal~vYv~s~~~ll~~~l~~~~~~~ 447 (500)
.+++...+|+||+|||.||+|+|+|+|+++++..|++||++.|+..+.||++.|||||++||++ +++..+++ |+|+.
T Consensus 437 tL~~~s~~Plnk~L~slsfvCVT~~~A~Li~S~mY~~iDv~EW~~~~~P~~~~GMNAi~~YV~~--~vL~~~~~-W~~R~ 513 (549)
T KOG4683|consen 437 TLCGFSAIPLNKNLWSLSFVCVTVSLALLILSLMYYFIDVREWSWSGYPFTECGMNAIVMYVGH--SVLHKMLP-WHWRI 513 (549)
T ss_pred hhhcccccchhHhHHHhhhhHHHHHHHHHHHHHHHHHhhHHHhhhccCChhhhccchhHHHHhH--HHHHHhcc-hhhcc
Confidence 9997668999999999999999999999999999999999999888899999999999999999 99998887 99999
Q ss_pred CCcchHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCceEeC
Q 010822 448 PDNTLVNWIQNHLFIHVWNSERLGTLLYVIFAEITFWGVVAGILHRLGIYWKL 500 (500)
Q Consensus 448 ~~~~l~~~l~~~l~~~~~~~~~~gsLlyal~~~~~~W~lia~~L~rkkIfiKl 500 (500)
+++++ |++...|++- .+++|.+|+.++|+.|||+|+
T Consensus 514 ~~~~~------H~~l~~~~t~-----------~~L~W~~i~~~~~~~~~Y~~~ 549 (549)
T KOG4683|consen 514 GEMNT------HFMLLLEATW-----------NTLVWVGIALYLDAQEFYYSV 549 (549)
T ss_pred CCCce------eEEEeeehhh-----------hhhhhhhhheeeeheeeEecC
Confidence 88875 2332333221 347899999999999999986
No 2
>COG4299 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=4.9e-82 Score=618.96 Aligned_cols=360 Identities=30% Similarity=0.454 Sum_probs=313.7
Q ss_pred ccchhhhhhhhhhhHhhhccceEEEEcCCCC---CCCcccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCCChhHHHH
Q 010822 60 SKRVATLDAFRGLTVVWVYTQLMILVDDAGG---AYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK 136 (500)
Q Consensus 60 ~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~---~y~~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~~~~~~ 136 (500)
..|+.|||+|||+||+ +||+|||.|- .|+|+.||+|+|||+||+|||+|+|++|+|||||++|..+.+....
T Consensus 5 a~RltsLDvfRGlTv~-----lMilVN~ag~gd~~y~qL~HA~w~G~T~tDlVFP~FLF~vG~am~Fs~sk~~~~n~~tw 79 (371)
T COG4299 5 AFRLTSLDVFRGLTVL-----LMILVNNAGLGDSTYRQLSHAHWGGLTLTDLVFPWFLFCVGAAMPFSASKMNKANVTTW 79 (371)
T ss_pred hhhhhhHHHHhhhHHH-----HHHhhcccccccccccccccccccCCCHHHHHHHHHHHHHhhhccccccccCccCCcch
Confidence 3699999999999999 9999999873 8999999999999999999999999999999999999887777779
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccCCc-CCcccccchHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhH
Q 010822 137 KIIFRTLKLLFWGIILQGGYSHAPDALSYGVD-MKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQ 215 (500)
Q Consensus 137 kil~Rsl~LfllGl~l~~~~~~~~~~~~~~~d-~~~iR~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~~~~~~~ 215 (500)
++.||.+.+|++|.++++ |....+ ..++ .+..|.+|||||||+||+++|+....+++ |
T Consensus 80 ~~~RRaa~~f~Lg~Lm~~-F~~~~~---ws~~~~s~tr~mGVLQrIaL~ylfAal~v~~L~~-----------------r 138 (371)
T COG4299 80 PLYRRAAERFALGYLMGA-FVTVRD---WSVTSHSLTRGMGVLQRIALAYLFAALLVRQLRG-----------------R 138 (371)
T ss_pred HHHHHHHHHHHHHHHhhh-ccccce---eeeeechhhHHHHHHHHHHHHHHHHHHHHHhcCh-----------------H
Confidence 999999999999999975 443221 1233 67899999999999999999999866553 5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCccccCCCCcceeeeccCCCCCCCCCCCHHHHHHHHhcCCCCccCCccccccccc
Q 010822 216 WQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEAC 295 (500)
Q Consensus 216 ~q~~~~~~ll~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~~g~~g~l~~~~N~a~~iDr~vlG~~HlY~~p~~~~~~~c 295 (500)
+||+.+++++++||+++...|+|+.+ ++..+|+..++|+...+.+|+|.+
T Consensus 139 ~q~~laavLL~gYwl~lm~~p~P~~~---------------------l~~~Gn~g~~~d~l~i~~~hLy~~--------- 188 (371)
T COG4299 139 WQALLAAVLLAGYWLFLMFTPHPAAP---------------------LGGIGNVGESADPLQILNDHLYSA--------- 188 (371)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccc---------------------cccccccccccchhhhhhhhhhcc---------
Confidence 89999999999999988778888643 345678999999999999999985
Q ss_pred cCCCCCCCCCCCCCCCcccCCCCCcchhhhhHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010822 296 TLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNAI 375 (500)
Q Consensus 296 ~~~~~~~g~~~~~~~~~~~~~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~~rl~~~l~~G~~llilG~ll~~~~~~ 375 (500)
+ ..|||||++||+|++++++.|+++++.+++++...+....+.+.|++++++|+.|+. .+
T Consensus 189 ------d------------G~~dpeGLlstvPttv~VLaGylaar~l~~~p~~~ra~l~la~~Gvvl~~~G~gW~~--~f 248 (371)
T COG4299 189 ------D------------GGFDPEGLLSTVPTTVLVLAGYLAARPLQQKPGNPRAPLLLAGLGVVLTALGYGWAG--RF 248 (371)
T ss_pred ------c------------CCCCchhhhhcchHHHHHHHHHHhhhHHhhCCCCCcchHHHHHHHHHHHHhcccccc--cc
Confidence 1 248999999999999999999999999998877777788899999999999999975 69
Q ss_pred CccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhh-ccce--ecCCCcch
Q 010822 376 PINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFV-NGWY--YKNPDNTL 452 (500)
Q Consensus 376 PiNK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nal~vYv~s~~~ll~~~l-~~~~--~~~~~~~l 452 (500)
||||+|||+|||++|+|++.++++.||.++|.++-+++.+||+++|.|||+.||+| .++...+ .-|. +..+..+
T Consensus 249 Pi~KkLWTssyvl~t~G~~llllaac~~l~e~~~~kr~~~pf~i~GlNalalyvls--~L~~v~l~~~~g~getaps~~- 325 (371)
T COG4299 249 PISKKLWTSSYVLYTAGLGLLLLAACWVLAESPGGKRLLAPFTIPGLNALALYVLS--ILIKVWLLLDWGVGETAPSQS- 325 (371)
T ss_pred ccchhhcCCceeehhhhHHHHHHHHHHHHHcCcccCcCcCceeecCcchhHHHHHH--HHHHHHHhhccccccccCCcc-
Confidence 99999999999999999999999999999999999999999999999999999999 6665433 2222 1223334
Q ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCceEeC
Q 010822 453 VNWIQNHLFIHVWNSERLGTLLYVIFAEITFWGVVAGILHRLGIYWKL 500 (500)
Q Consensus 453 ~~~l~~~l~~~~~~~~~~gsLlyal~~~~~~W~lia~~L~rkkIfiKl 500 (500)
++|++.++|++ +.+++.||++|++.++.++| +.+++|+||+|++|+
T Consensus 326 ~~w~~~n~f~s-~~g~~~Gsll~aL~yvl~~W-l~~~~MaRrg~~~Kl 371 (371)
T COG4299 326 IAWSLLNMFRS-SFGPVGGSLLYALGYVLAVW-LGLAWMARRGIIWKL 371 (371)
T ss_pred hhHHHHHHHHH-hcCCCCchhHHHHHHHHHHH-HHHHHHHhcceeeeC
Confidence 68999999987 68999999999999555555 689999999999997
No 3
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.
Probab=99.81 E-value=1.7e-19 Score=174.83 Aligned_cols=187 Identities=24% Similarity=0.295 Sum_probs=131.2
Q ss_pred chhhhhhhhhhhHhhhccceEEEEcCCCC-CCCc--ccCC--CCCCCCcchhhHHHHHHHHHHHHHhhhccCCChhHHHH
Q 010822 62 RVATLDAFRGLTVVWVYTQLMILVDDAGG-AYAR--IDHS--PWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK 136 (500)
Q Consensus 62 Rl~SLDvfRGltia~~~~~lMIlVN~~G~-~y~~--l~Ha--~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~~~~~~ 136 (500)
|+.++|++||++|+ +|++||.... .+.. -.|. .+......|+++|.|+|++|+|++++.+|+.++ +
T Consensus 1 Ri~~lD~~RGlaii-----~Mi~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap~F~fl~G~s~~l~~~~~~~~----~ 71 (223)
T PF07786_consen 1 RIPSLDALRGLAII-----GMILVHFLFDLNYFGGWPQSWFGSFFWRFFRGLAAPLFLFLAGISLALSTGRRRRR----R 71 (223)
T ss_pred CcHHHHHHHHHHHH-----hhhHhhCcChHhhcCccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHhcccccch----h
Confidence 89999999999999 9999999754 2211 1222 356677889999999999999999999887665 8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccCCcCCcccccchHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHH
Q 010822 137 KIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQW 216 (500)
Q Consensus 137 kil~Rsl~LfllGl~l~~~~~~~~~~~~~~~d~~~iR~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~~~~~~~~ 216 (500)
+.+||.++|+++|++++.... ....+...+.||||+||+||++++++. ..++ +.
T Consensus 72 ~~~~R~~~l~~~g~~i~~~~~--------~~~~~~~i~~gIL~~ig~~~ll~~~~~-~~~~-----------------~~ 125 (223)
T PF07786_consen 72 KFLKRGLKLFLLGLLINLLTF--------FFFPEGFIYFGILQFIGLSMLLAALFL-RLPR-----------------RA 125 (223)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HhcCCceeehhHHHHHHHHHHHHHHHH-hcch-----------------hH
Confidence 999999999999999975311 011234457799999999999988873 2322 23
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCccccCCCCcceeeeccCCCCCCCCCCCHHHHHHHHhcCCCCccCCcccccccccc
Q 010822 217 QWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACT 296 (500)
Q Consensus 217 q~~~~~~ll~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~~g~~g~l~~~~N~a~~iDr~vlG~~HlY~~p~~~~~~~c~ 296 (500)
.++.+++++++++.+... .. ++ + +...+| ++.
T Consensus 126 ~~~~~~~~~~~~~~l~~~--~~-------------------------~~--~-----~~~~~~---~~~----------- 157 (223)
T PF07786_consen 126 LLILALLLLALSWLLSGP--VF-------------------------GP--P-----WLLWLG---LSS----------- 157 (223)
T ss_pred HHHHHHHHHHHHHHHhhh--hc-------------------------Cc--h-----HHHHhc---ccc-----------
Confidence 455555555555544321 00 00 0 111122 111
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCcchhhhhHHHHHHHHHHHHHHHHhccccch
Q 010822 297 LSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHS 349 (500)
Q Consensus 297 ~~~~~~g~~~~~~~~~~~~~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~ 349 (500)
..++++|....+|++...++|+.+|+...+....+
T Consensus 158 ------------------~~~~~~~~~Pl~PW~~~~l~G~~~G~~~~~~~~~~ 192 (223)
T PF07786_consen 158 ------------------RNFFSNGYFPLFPWLGFFLLGMALGRLFLRKGRRR 192 (223)
T ss_pred ------------------cCCCcCCcCccHHHHHHHHHHHHHHHHHHHhcccc
Confidence 14688999999999999999999999987653333
No 4
>COG3503 Predicted membrane protein [Function unknown]
Probab=98.67 E-value=2e-07 Score=94.71 Aligned_cols=251 Identities=19% Similarity=0.244 Sum_probs=152.3
Q ss_pred cchhhhhhhhhhhHhhhccceEEEEcCCCCCCCcccCCCCCCC------------CcchhhHHHHHHHHHHHHHhhhccC
Q 010822 61 KRVATLDAFRGLTVVWVYTQLMILVDDAGGAYARIDHSPWNGC------------TLADFVMPFFLFIVGVAIALALKKV 128 (500)
Q Consensus 61 ~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~~l~Ha~WnG~------------t~aDlVfP~FLFivGvsi~lSl~~~ 128 (500)
+|+-.+|++||+.|. +|++-.. +-|.+--|- .++-++-|.|+|++|+|..+|=.|.
T Consensus 14 ~R~~~ID~LRGla~l-----~MalyHf-------~~dl~ffg~~dl~~ta~g~~r~~ar~~A~~FlFLaG~Sl~L~~~r~ 81 (323)
T COG3503 14 NRLGEIDILRGLALL-----AMALYHF-------FWDLEFFGYMDLATTALGLWRYFARLIASSFLFLAGVSLSLSHSRG 81 (323)
T ss_pred cchhhhHHHhHHHHH-----HHHHHHH-------HhhhhhcCccccchhhhhHHHHHHHHHHHHHHHHHhhHheeecccc
Confidence 799999999999999 8886432 111111111 2456788999999999999998766
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCcCCcccccchHHHHHHHHHHHHHHHHHhcCCCCCCCCccch
Q 010822 129 PKINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHL 208 (500)
Q Consensus 129 ~~~~~~~~kil~Rsl~LfllGl~l~~~~~~~~~~~~~~~d~~~iR~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~ 208 (500)
..+ .++..||.++|..+++.+.+.-.. .+ .++.=+.|||-.||++-++.+.+. ..++.
T Consensus 82 ~~r---~~~l~kRgL~l~~l~l~It~~Twf-------~~-P~sfI~fgILh~igLa~ll~~~fl-~lP~~---------- 139 (323)
T COG3503 82 LRR---WRFLVKRGLKLAALALAITAVTWF-------AF-PDSFIFFGILHAIGLASLLGAAFL-WLPRA---------- 139 (323)
T ss_pred ccc---hHHHHHHHHHHHHHHHHHHHeeeE-------ec-CCceehHHHHHHHHHHHHHHHHHH-hCchH----------
Confidence 553 789999999999999999653111 11 256668899999999998877664 33431
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhccCCCCccccCCCCcceeeeccCCCCCCCCCCCHHHHHHHHhcCCCCccCCcc
Q 010822 209 SIFTAYQWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPV 288 (500)
Q Consensus 209 ~~~~~~~~q~~~~~~ll~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~~g~~g~l~~~~N~a~~iDr~vlG~~HlY~~p~ 288 (500)
++...++++++++..+- +. . + +.+..-|+-....+ |
T Consensus 140 -------~~l~~a~~~v~~~~lL~---~~---~---------------------f--~~~~l~w~g~~~~~-------~- 175 (323)
T COG3503 140 -------VLLALAVAAVAAHILLR---PA---R---------------------F--GTPMLWWLGLRPYG-------P- 175 (323)
T ss_pred -------HHHHHHHHHHHhHHhcC---cc---c---------------------c--CCCchhheeecccc-------C-
Confidence 34555555555444221 00 0 0 11222233221111 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCcccCCCCCcchhhhhHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH------
Q 010822 289 WSRLEACTLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGL------ 362 (500)
Q Consensus 289 ~~~~~~c~~~~~~~g~~~~~~~~~~~~~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~~rl~~~l~~G~~l------ 362 (500)
...|+-= -+|.+.-.++|+..|+.+.... ..+|..-...-|..+
T Consensus 176 --------------------------r~~dy~P---LlPW~gv~LlG~a~g~~~~~~~-~~~r~~~~~~~~~~~ll~~~~ 225 (323)
T COG3503 176 --------------------------RTLDYYP---LLPWFGVFLLGIAFGNALRPGG-PRARRRSPAALGLALLLLAFN 225 (323)
T ss_pred --------------------------cccCcCc---cccHHHHHHHHhhhhhhhcCCc-hhhhhccccccccchhHHHHc
Confidence 0123332 3689999999999999986432 222211111111111
Q ss_pred -------------HHHHHHHhcCCCCCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHH
Q 010822 363 -------------LIIAIILHFTNAIPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFV 429 (500)
Q Consensus 363 -------------lilG~ll~~~~~~PiNK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nal~vYv 429 (500)
+++|+++- +=.-|---+.-|++.|-|.+.. .++-...+ ...-+...|.-+|+.|.
T Consensus 226 G~~sl~~y~ihqp~li~lv~~----~~l~~~p~~~d~~~~~l~~c~~-------a~e~~~~~-~~~a~~~~~~~~l~~~~ 293 (323)
T COG3503 226 GRHSLKPYLIHQPVLIGLVWL----FNLTKPPPSLDFVLLTLGLCLL-------ACERLPGR-GCSALCGCGLAPLFFYL 293 (323)
T ss_pred CCCCCceeecCCCHHHHHHHH----HhcCCCCCcccHHHHHHHHHHH-------HHhcCCCC-CcchhhhcCcchHHHHH
Confidence 12233321 1245666778888888854432 33333333 37789999999999999
Q ss_pred Hh
Q 010822 430 LG 431 (500)
Q Consensus 430 ~s 431 (500)
+|
T Consensus 294 l~ 295 (323)
T COG3503 294 LH 295 (323)
T ss_pred HH
Confidence 99
No 5
>PF10129 OpgC_C: OpgC protein; InterPro: IPR014550 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.63 E-value=6.1e-06 Score=86.78 Aligned_cols=76 Identities=28% Similarity=0.406 Sum_probs=53.1
Q ss_pred chhhhhhhhhhhHhhhccceEEEEcC-CCCCCCcccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCC---ChhHHHHH
Q 010822 62 RVATLDAFRGLTVVWVYTQLMILVDD-AGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVP---KINGAVKK 137 (500)
Q Consensus 62 Rl~SLDvfRGltia~~~~~lMIlVN~-~G~~y~~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~---~~~~~~~k 137 (500)
|-..||.|||+.+. ||++|. ||+.+..+.|.++-=..-| -.|.|++|.+..+++.|+. ......+|
T Consensus 1 Rd~riD~~RGlaL~------~Ifi~Hip~~~~~~~T~~~~GfsdaA----E~FVflSG~~~gl~Y~~~~~~~g~~~~~~r 70 (358)
T PF10129_consen 1 RDLRIDFFRGLALV------MIFIDHIPGNVLEWFTLRNFGFSDAA----EGFVFLSGYAAGLAYGRRFRRRGLWAATRR 70 (358)
T ss_pred CchHHHHHHHHHHH------HHHHHhcCCcHHHHhccccccCCCcc----hhHhhHHHHHHHHHHhHHHhhcCHHHHHHH
Confidence 55679999999987 455555 5555554555554333333 4699999999999997654 33467899
Q ss_pred HHHHHHHHHH
Q 010822 138 IIFRTLKLLF 147 (500)
Q Consensus 138 il~Rsl~Lfl 147 (500)
+.||+..|..
T Consensus 71 ~~~Ra~~lY~ 80 (358)
T PF10129_consen 71 LWRRAWQLYV 80 (358)
T ss_pred HHHHHHHHHH
Confidence 9999887543
No 6
>COG2311 Predicted membrane protein [Function unknown]
Probab=98.40 E-value=9.9e-06 Score=85.86 Aligned_cols=133 Identities=25% Similarity=0.322 Sum_probs=86.4
Q ss_pred hcccchhhhhhhhhhhHhhhccceEEEEcCCCCCCC----cccCCCCCCCCcchhh-------------HHHHHHHHHHH
Q 010822 58 QKSKRVATLDAFRGLTVVWVYTQLMILVDDAGGAYA----RIDHSPWNGCTLADFV-------------MPFFLFIVGVA 120 (500)
Q Consensus 58 ~~~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~----~l~Ha~WnG~t~aDlV-------------fP~FLFivGvs 120 (500)
.+++|+.+||++||+++. +.++||-.--.|| ..-|.. ..++.|-+ .|.|-|.-|+.
T Consensus 8 ~~~eRi~~LDilRG~AlL-----GILl~Ni~~F~~p~~~~~~~~~~--~~s~~D~~a~~~v~~f~~~KF~~lFs~LFG~G 80 (394)
T COG2311 8 AQRERILTLDILRGFALL-----GILLVNISAFGYPGAAYLNPWSG--WLSPLDAWAWALVDLFAQGKFLTLFSFLFGVG 80 (394)
T ss_pred chhhhhHHHHHHHHHHHH-----HHHHHHHHHHhCchHHHhCcCcc--cCChHHHHHHHHHHHHHHhhHHHHHHHHHHhH
Confidence 345799999999999999 8899986422221 011333 23444432 58888888888
Q ss_pred HHhhhccCCChh-HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCcCCcccccchHHHHHHHHHHHHHHHHHhcCCC
Q 010822 121 IALALKKVPKIN-GAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRR 199 (500)
Q Consensus 121 i~lSl~~~~~~~-~~~~kil~Rsl~LfllGl~l~~~~~~~~~~~~~~~d~~~iR~~GVLQRIal~Ylv~all~l~~~~~~ 199 (500)
+..-++|..+|+ +..+.-+||...|+++|++=.-...+ .-|-+.|.+.+++.+.+.+++
T Consensus 81 ~~~~~~r~~~~g~~~~~~~~RR~~~Lll~G~iH~~fiW~--------------------GDIL~~Ya~~g~ill~~~~~~ 140 (394)
T COG2311 81 LAMMLRRAARKGRRWVALYARRLLLLLLLGLIHALFIWD--------------------GDILLAYALTGLILLLFRRRK 140 (394)
T ss_pred HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHHHhc--------------------chHHHHHHHHHHHHHHHHhcc
Confidence 888887754443 33344499999999999963211111 125678988899888887766
Q ss_pred CCCCCccchhhhhhhHHHHHHHHHHHHHHHHH
Q 010822 200 PNVLEPRHLSIFTAYQWQWIGGFIAFVIYIIT 231 (500)
Q Consensus 200 ~~~~~~~~~~~~~~~~~q~~~~~~ll~~y~~l 231 (500)
++ +.+.++..+++.+.++
T Consensus 141 ~k--------------~l~~~~~~l~l~~~~~ 158 (394)
T COG2311 141 PK--------------TLLIWATALLLLPVLL 158 (394)
T ss_pred cc--------------HHHHHHHHHHHHHHHH
Confidence 44 4455555555555543
No 7
>PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast [].; GO: 0016746 transferase activity, transferring acyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=98.39 E-value=3.4e-06 Score=77.29 Aligned_cols=119 Identities=18% Similarity=0.287 Sum_probs=94.7
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhccccch---------HHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCchhHHH
Q 010822 318 EPEGLLSTISAILSGTIGIHYGHVLIHFKGHS---------ARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVC 388 (500)
Q Consensus 318 DPEGlLStlpai~~~llG~~aG~~L~~~~~~~---------~rl~~~l~~G~~llilG~ll~~~~~~PiNK~LWT~SfVL 388 (500)
.-|||+|.++-++-=++|...|+.+...+... ++..+++.+.+++.++-++++.. ..|++.++...+||+
T Consensus 2 NrEGi~S~~GY~aIyl~g~~~G~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~vSRRlaNl~Yvl 80 (136)
T PF06423_consen 2 NREGIFSLPGYLAIYLIGVSLGRYILPPSSSSNSSSRRQWIKLLIKLLILSFIFWALYYLLNSY-IEPVSRRLANLPYVL 80 (136)
T ss_pred CcchhhhHHHHHHHHHHHHHHhhhhhCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCchhHHhcchHHHH
Confidence 46999999999999999999999985543322 33456677777777777777533 689999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhcCccc-----cchhhhhcchhHHHHHHHhhhhhhhhh
Q 010822 389 FTAGAAGIVFSALYVLMDVWELRT-----PFLFLKWIGMNAMLVFVLGAQGILAGF 439 (500)
Q Consensus 389 ~TaG~a~l~La~~y~liDv~~~~~-----~~~pf~~~G~Nal~vYv~s~~~ll~~~ 439 (500)
.+.+.....+++++.+-++....+ ....++.+.+|.|++|+++ .++..+
T Consensus 81 wv~a~n~~~l~~~~~i~~~~~~~~~~~~~~~~l~~aiN~N~L~~FLla--NllTGl 134 (136)
T PF06423_consen 81 WVLAFNTFFLALYLLIELLLFRPKASYSKTPCLLDAINRNGLFVFLLA--NLLTGL 134 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccHHHHHHcccccHHHHHH--HHHHcc
Confidence 999999999988777766665433 4567899999999999999 777654
No 8
>PF01757 Acyl_transf_3: Acyltransferase family; InterPro: IPR002656 This entry contains a range of acyltransferase enzymes as well as yet uncharacterised proteins from Caenorhabditis elegans. It also includes the protein OatA. The pathogenic bacteria, Staphylococcus aureus, is able to cause persistent infections due to its ability to resist the immune defence system. Lysozyme, a cell wall-lytic enzyme, is one of the first defence compounds induced in serum and tissues after the onset of infection. S. aureus has complete resistance to lysozyme action by O-acetylating its peptidoglycan (PG) by O-acetyltransferase (OatA) [, ]. Staphylococcus bacteria are one of the only bacterial genera that are resistant to lysozyme and tend to colonise the skin and mucosa of humans and animals []. OatA is an integral membrane protein. This entry also includes NolL proteins. NolL-dependent acetylation is specific for the fucosyl penta-N-acetylglucosamine species. In addition, the NolL protein caused elevated production of lipo-chitin oligosaccharides (LCOs). The NolL protein obtained from Rhizobium loti (Mesorhizobium loti) functions as an acetyl transferase [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=98.25 E-value=7.6e-05 Score=72.28 Aligned_cols=81 Identities=22% Similarity=0.241 Sum_probs=43.6
Q ss_pred hhhhhhhhhhHhhhccceEEEEcCCCCCC------CcccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCCChhHHHHH
Q 010822 64 ATLDAFRGLTVVWVYTQLMILVDDAGGAY------ARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKK 137 (500)
Q Consensus 64 ~SLDvfRGltia~~~~~lMIlVN~~G~~y------~~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~~~~~~k 137 (500)
.++|.+||+++. ++++.+...... ....+..+......-+-+|.|.++.|..+.-..+++.+..+.++|
T Consensus 2 ~~iD~lR~ia~l-----~Vv~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ff~iSG~~~~~~~~~~~~~~~~~~~ 76 (340)
T PF01757_consen 2 YWIDGLRGIAIL-----LVVFGHSFIFYFPPPFQGWPIFDSFSIFLFIGRFAVPLFFFISGYLLARSSKSRKSWKKFLKK 76 (340)
T ss_pred chhHHHHHHHHH-----HHHHHHHHHHhcccccccchhhhhHhhhhhhhhhHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 589999999999 555543322100 000000000006778999999999999998111122222344444
Q ss_pred HHHHHHHHHHHH
Q 010822 138 IIFRTLKLLFWG 149 (500)
Q Consensus 138 il~Rsl~LfllG 149 (500)
=++|.....++.
T Consensus 77 R~~rl~~~~~~~ 88 (340)
T PF01757_consen 77 RFLRLLIPYLFW 88 (340)
T ss_pred HHHHHhHHHHHH
Confidence 444544433333
No 9
>PRK10835 hypothetical protein; Provisional
Probab=98.07 E-value=0.0008 Score=71.18 Aligned_cols=76 Identities=20% Similarity=0.351 Sum_probs=48.1
Q ss_pred hhhhhhhhHhhhccceEEEEcCCCCCCCc---ccCCCCCCCCcchhh-------------HHHHHHHHHHHHHhhhccCC
Q 010822 66 LDAFRGLTVVWVYTQLMILVDDAGGAYAR---IDHSPWNGCTLADFV-------------MPFFLFIVGVAIALALKKVP 129 (500)
Q Consensus 66 LDvfRGltia~~~~~lMIlVN~~G~~y~~---l~Ha~WnG~t~aDlV-------------fP~FLFivGvsi~lSl~~~~ 129 (500)
||++||+++. +..+||-+.-..+. ......++.+..|-+ +|.|-+.-|+++.+-.+|..
T Consensus 1 lD~lRGfALl-----GIllvNi~~f~~~~~~~~~~~~~~~~~~~d~~~~~~~~~f~~gKf~~LFs~LFG~G~~l~~~r~~ 75 (373)
T PRK10835 1 LDFVRGVAIL-----GILLLNISAFGLPKAAYLNPAWYGAISPSDAWTWAILDLVAQVKFLTLFALLFGAGLQLLLPRGK 75 (373)
T ss_pred CcHHHHHHHH-----HHHHHHHHHHhCccccccCccccCCCCchHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHhhh
Confidence 7999999999 88888842111111 000011233445443 48888888888887765421
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Q 010822 130 KINGAVKKIIFRTLKLLFWGIIL 152 (500)
Q Consensus 130 ~~~~~~~kil~Rsl~LfllGl~l 152 (500)
+ .-.||...|+++|++=
T Consensus 76 ~------~~~rRl~~Ll~~GliH 92 (373)
T PRK10835 76 R------WIQSRLTLLVLLGFIH 92 (373)
T ss_pred H------HHHHHHHHHHHHHHHH
Confidence 1 2458999999999975
No 10
>PRK03854 opgC glucans biosynthesis protein; Provisional
Probab=97.11 E-value=0.12 Score=54.21 Aligned_cols=88 Identities=23% Similarity=0.217 Sum_probs=55.4
Q ss_pred hhcccchhhhhhhhhhhHhhhccceEEEEcCCCCCCC-------cccCCCCCCCCcch----hhHHHHHHHHHHHHHhhh
Q 010822 57 QQKSKRVATLDAFRGLTVVWVYTQLMILVDDAGGAYA-------RIDHSPWNGCTLAD----FVMPFFLFIVGVAIALAL 125 (500)
Q Consensus 57 ~~~~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~-------~l~Ha~WnG~t~aD----lVfP~FLFivGvsi~lSl 125 (500)
+++++|...+|.+||+.+. +.++.+.. ..|. ..+.+.|-.. +.. +-+|.|.|+.|.....+.
T Consensus 3 ~~~~~R~~~lD~lR~~a~l-----~VV~~H~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~mplFf~iSG~~~~~~~ 75 (375)
T PRK03854 3 PVPAQREYFLDSIRAWLML-----LGIPFHIS-LIYSSHTWHVNSAEPSLWLTL-LNDFIHAFRMQVFFVISGYFSYMLF 75 (375)
T ss_pred CCccchhhhHHHHHHHHHH-----HHHHHHHH-HHhccccccccCcccchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456799999999999998 44433321 0110 0111222100 111 348999999999998887
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHH
Q 010822 126 KKVPKINGAVKKIIFRTLKLLFWGIIL 152 (500)
Q Consensus 126 ~~~~~~~~~~~kil~Rsl~LfllGl~l 152 (500)
+|+ +.++.++|=++|.++-++++.++
T Consensus 76 ~~~-~~~~f~~~R~~rl~iP~l~~~~~ 101 (375)
T PRK03854 76 LRY-PPKRWLKVRLERVGIPMLTAIPL 101 (375)
T ss_pred cCc-cHHHHHHHHHHHhhHHHHHHHHH
Confidence 654 34567788888888877777544
No 11
>PF04235 DUF418: Protein of unknown function (DUF418); InterPro: IPR007349 Tihs is a probable integral membrane protein. It is usually found associated with (IPR007299 from INTERPRO).
Probab=96.48 E-value=0.045 Score=50.81 Aligned_cols=90 Identities=18% Similarity=0.142 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhc-----CCCCCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhc
Q 010822 346 KGHSARLKHWVSMGFGLLIIAIILHF-----TNAIPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWI 420 (500)
Q Consensus 346 ~~~~~rl~~~l~~G~~llilG~ll~~-----~~~~PiNK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~ 420 (500)
+.+++..++.+.++++..+...+... ....+.+....+....+.....+....+++..+.+..+.++...||...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~y~~l~~ll~~~~~~~~~~~~l~~~ 90 (163)
T PF04235_consen 11 EEHRKLLRRLLLIGLAVGLPLALLSAASWLSAWPSPPAAHLSSVLYMLGGPLLALGYVALLILLCQKRPRQRLLRPLAAV 90 (163)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 34445555555555555433333222 1124555666666677777778888899999999998887889999999
Q ss_pred chhHHHHHHHhhhhhhh
Q 010822 421 GMNAMLVFVLGAQGILA 437 (500)
Q Consensus 421 G~Nal~vYv~s~~~ll~ 437 (500)
|+-|+..|+.+ .++.
T Consensus 91 GrmaLT~Yi~q--sii~ 105 (163)
T PF04235_consen 91 GRMALTNYILQ--SIIG 105 (163)
T ss_pred hhHHHHHHHHH--HHHH
Confidence 99999999999 5554
No 12
>COG3594 NolL Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]
Probab=94.60 E-value=1.3 Score=46.70 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=38.1
Q ss_pred ccccCCchhH-HHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhhc
Q 010822 377 INKQLYSFSY-VCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFVN 441 (500)
Q Consensus 377 iNK~LWT~Sf-VL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nal~vYv~s~~~ll~~~l~ 441 (500)
.+++.|..++ +...+|.++..+..+...++.+ ..++++.|+|++.+|.+| +++...+.
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~lG~~TL~I~~lH--g~v~~~~~ 286 (343)
T COG3594 228 SFGNIFVGGLLRALVLGLALNALVRFAAKIPQL-----RKLVTKLGKNTLYIYLLH--GFVFKVLR 286 (343)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHHHhhhhHHHHHHH--HHHHHHHH
Confidence 4555444443 3445556666555555555442 368999999999999999 77765554
No 13
>COG4645 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.16 E-value=0.09 Score=55.12 Aligned_cols=79 Identities=27% Similarity=0.355 Sum_probs=53.9
Q ss_pred ccchhhhhhhhhhhHhhhccceEEEEcCCCCCCCcccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCC-ChhH--HHH
Q 010822 60 SKRVATLDAFRGLTVVWVYTQLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVP-KING--AVK 136 (500)
Q Consensus 60 ~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~-~~~~--~~~ 136 (500)
.+|...+|+|||+..+ .|.+-+-+|..+..++|-+ -|++=+ -=.|+||+|.++..++.|+- +-++ ...
T Consensus 21 mkRdtriDv~Ral~Lv-----~IfiNHvpgt~le~itHkn-fgfsda---AEaFVliSGllvgmaYsrKf~~ggrla~~l 91 (410)
T COG4645 21 MKRDTRIDVFRALALV-----TIFINHVPGTILEEITHKN-FGFSDA---AEAFVLISGLLVGMAYSRKFMKGGRLAGTL 91 (410)
T ss_pred cCchhHHHHHHHHHHH-----HHHHhcccHHHHHHhhccc-cccccc---chhhhhHHHHHHHHHHhhhhccCcHHHHHH
Confidence 3699999999999988 5544444565555566655 232221 13689999999999997653 3233 345
Q ss_pred HHHHHHHHHHH
Q 010822 137 KIIFRTLKLLF 147 (500)
Q Consensus 137 kil~Rsl~Lfl 147 (500)
|+-||+..|..
T Consensus 92 kiWrRA~~LY~ 102 (410)
T COG4645 92 KIWRRAMVLYV 102 (410)
T ss_pred HHHHHHHHHHH
Confidence 88888887765
No 14
>PF15345 TMEM51: Transmembrane protein 51
Probab=87.37 E-value=0.48 Score=47.30 Aligned_cols=58 Identities=26% Similarity=0.471 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC----------------------ccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccc
Q 010822 355 WVSMGFGLLIIAIILHFTNAIP----------------------INKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRT 412 (500)
Q Consensus 355 ~l~~G~~llilG~ll~~~~~~P----------------------iNK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~ 412 (500)
+-.+|+.|+++|.++-.+.++| .+++=-|.-|||+-+|.++|+|++|.-+=|-++.+.
T Consensus 9 L~AiG~Gml~LGiiM~vW~~VPg~~~~~~~~~~~~n~~~~~~~~~ksKt~SVAyVLVG~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 9 LTAIGVGMLALGIIMIVWNLVPGFSSGNKPTPQGSNSTEPSDGNLKSKTFSVAYVLVGSGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHhHhHHHHhhHheeeeecccccCCCCCCCCCCCCcCCCCCcccceeEEEEEehhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4568888999998875443344 233456778999999999999999999988776544
No 15
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=82.07 E-value=24 Score=37.29 Aligned_cols=72 Identities=15% Similarity=0.294 Sum_probs=42.0
Q ss_pred ccchhhhhhhhhhhHhhhccceEEEEcCCCC-CCCc-ccCCC-C---CCCCc-chhhHHHHHHHHHHHHHhhhccCCChh
Q 010822 60 SKRVATLDAFRGLTVVWVYTQLMILVDDAGG-AYAR-IDHSP-W---NGCTL-ADFVMPFFLFIVGVAIALALKKVPKIN 132 (500)
Q Consensus 60 ~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~-~y~~-l~Ha~-W---nG~t~-aDlVfP~FLFivGvsi~lSl~~~~~~~ 132 (500)
.+|+.++|.+|++++. ..|.....-. .|.+ +.|.. | |+..- .=.--|.|.-|.|. +-+.++..+.
T Consensus 2 ~~ri~wiD~~r~iA~f-----~VV~iH~~~~~~t~~~~vs~~~w~i~nvlns~sr~aVPLFfmISGy---L~~~e~s~q~ 73 (332)
T COG3274 2 QPRIVWIDLLRSIACF-----MVVMIHSTLWSVTEAHFVSPTLWIIANVLNSASRVAVPLFFMISGY---LFFGERSAQP 73 (332)
T ss_pred CcchhHHHHHHHHHHH-----HHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcccccccH
Confidence 3699999999999998 4344333221 2222 23321 4 44433 35567999999885 3344555555
Q ss_pred HHHHHHH
Q 010822 133 GAVKKII 139 (500)
Q Consensus 133 ~~~~kil 139 (500)
..+.|+.
T Consensus 74 ~~f~ri~ 80 (332)
T COG3274 74 KLFLRIG 80 (332)
T ss_pred HHHHHHH
Confidence 5555543
No 16
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=56.19 E-value=26 Score=39.90 Aligned_cols=69 Identities=20% Similarity=0.354 Sum_probs=42.5
Q ss_pred CCCCcchhhhhHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCchhHHHHHhHHHH
Q 010822 316 PFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVCFTAGAAG 395 (500)
Q Consensus 316 ~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~~rl~~~l~~G~~llilG~ll~~~~~~PiNK~LWT~SfVL~TaG~a~ 395 (500)
..||.-++.- ....++|+..|. ++-|++++++|+++-.. ..-.++.+-...+++..+|++.
T Consensus 343 EiDPT~~~ai---~f~lfFGmM~gD---------------~GyGLil~l~~~~l~~~-~~k~~~~~~~~~~il~~~gi~s 403 (646)
T PRK05771 343 EIDPTPFLAI---FFPLFFGMMLGD---------------AGYGLLLLLIGLLLSFK-LKKKSEGLKRLLKILIYLGIST 403 (646)
T ss_pred CcCCccHHHH---HHHHHHHHHHHh---------------HHHHHHHHHHHHHHHHh-cccccHHHHHHHHHHHHHHHHH
Confidence 4699988652 234467777775 34566666666655331 1123455566677777777777
Q ss_pred HHHHHHHH
Q 010822 396 IVFSALYV 403 (500)
Q Consensus 396 l~La~~y~ 403 (500)
++++++|-
T Consensus 404 ii~G~lyG 411 (646)
T PRK05771 404 IIWGLLTG 411 (646)
T ss_pred HHHHHHHH
Confidence 77777763
No 17
>COG5062 Uncharacterized membrane protein [Function unknown]
Probab=53.53 E-value=94 Score=33.47 Aligned_cols=268 Identities=19% Similarity=0.249 Sum_probs=139.1
Q ss_pred ccchhhhhhhhhhhHhhhccceEEEEcCCCCCCC-cccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCCChhHHHHHH
Q 010822 60 SKRVATLDAFRGLTVVWVYTQLMILVDDAGGAYA-RIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKI 138 (500)
Q Consensus 60 ~~Rl~SLDvfRGltia~~~~~lMIlVN~~G~~y~-~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~~~~~~ki 138 (500)
+.|..++|..|+.-+. +......-||.| .|| .+.-++=-|.++-|+--=.|+|-.|+-- -+ ..+ ++.
T Consensus 108 ~~~~~~it~yR~~i~~-~tviaIlAvDFp--~fprRlgKsetwGtsLMDiGVGSFvynsGivs---~R-aks-----K~~ 175 (429)
T COG5062 108 PYTSMAITRYRFLIIG-CTVIAILAVDFP--FFPRRLGKSETWGTSLMDIGVGSFVYNSGIVS---TR-AKS-----KRK 175 (429)
T ss_pred ccchhhhHHHHHHHHH-hhhhheeeeccc--cchHhhhhhhcccceeeecccceeEeccceee---cc-cCc-----cHH
Confidence 4577889999986444 111144455554 232 3555666799999999999999888632 11 222 238
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCccccCCcCCcccccchHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHHHH
Q 010822 139 IFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQWQW 218 (500)
Q Consensus 139 l~Rsl~LfllGl~l~~~~~~~~~~~~~~~d~~~iR~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~~~~~~~~q~ 218 (500)
+|-+++|+++|++=. |... .+.+ .+|.|=.||==-.=+.-.+..+...+.+++ ...
T Consensus 176 lkn~lillflGflR~--f~vk--~lny---qvhvrEyGvhwNFfftLgllnl~~~fir~r-----------------~nf 231 (429)
T COG5062 176 LKNALILLFLGFLRY--FSVK--LLNY---QVHVREYGVHWNFFFTLGLLNLASLFIRTR-----------------ANF 231 (429)
T ss_pred HHhhhHHHHHHHHHH--HHHH--Hhcc---ccccHHheeehhHHHHHHHHHHHHHHhhhh-----------------HhH
Confidence 899999999998631 1100 0011 134443344322222222223333333321 234
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCccccCCCCcceeeeccCCCCCCCCCCCHHHHHHHHhcCCCCccCCccccccccccCC
Q 010822 219 IGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLS 298 (500)
Q Consensus 219 ~~~~~ll~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~~g~~g~l~~~~N~a~~iDr~vlG~~HlY~~p~~~~~~~c~~~ 298 (500)
..+..+..+|=+++-..+ + .| + +|..| |
T Consensus 232 lLg~fi~l~he~lLkf~~--------------------------l---~k---f----------i~sa~--R-------- 259 (429)
T COG5062 232 LLGFFICLTHELLLKFFG--------------------------L---EK---F----------IYSAA--R-------- 259 (429)
T ss_pred HHHHHHHHHHHHHHHhcc--------------------------H---HH---h----------hhcCc--h--------
Confidence 455555555655442210 0 01 1 12210 0
Q ss_pred CCCCCCCCCCCCCcccCCCCCcchhhhhHHHHHHHHHHHHHHHHhccccchH-HHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010822 299 SPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSA-RLKHWVSMGFGLLIIAIILHFTNAIPI 377 (500)
Q Consensus 299 ~~~~g~~~~~~~~~~~~~fDPEGlLStlpai~~~llG~~aG~~L~~~~~~~~-rl~~~l~~G~~llilG~ll~~~~~~Pi 377 (500)
+. -..=+-|||-|++|-+..-+.|.-.|+++...++.++ ..+.|...-+..+.+=.+.++.- --
T Consensus 260 ---~~----------il~~NrEGI~sll~yisIfl~g~~tg~vvf~~kpTr~~~wk~~~~~~af~lciylVfnf~s-~s- 324 (429)
T COG5062 260 ---SS----------ILTSNREGITSLLPYISIFLMGADTGKVVFKKKPTRKKAWKIIILYNAFFLCVYLVFNFYS-TS- 324 (429)
T ss_pred ---hh----------HHHhchhhhhhcchhhhheeeecccceEEecCCCchHHHHHHHHHHHHHHHHHHHHHhhcc-cc-
Confidence 00 0112789999999999999999999998865554322 23333222222222222223320 11
Q ss_pred cccCCchhHHHHHhHHHHHHHHHHHHHHHhcCc--cccchhhhhcchhHHHHHHHh
Q 010822 378 NKQLYSFSYVCFTAGAAGIVFSALYVLMDVWEL--RTPFLFLKWIGMNAMLVFVLG 431 (500)
Q Consensus 378 NK~LWT~SfVL~TaG~a~l~La~~y~liDv~~~--~~~~~pf~~~G~Nal~vYv~s 431 (500)
+.++=...||+.-.-+-.+.+ ..|.++|--.. .+-..-|+-.-+|-++++..+
T Consensus 325 sRRlaNlpfv~wi~~lh~f~l-t~y~lfd~ts~~yn~v~~~fes~n~n~llvfs~a 379 (429)
T COG5062 325 SRRLANLPFVMWIMLLHTFHL-TVYELFDRTSKIYNLVMHRFESKNLNFLLVFSNA 379 (429)
T ss_pred hhhhcCccHHHHHHHHHHHHh-heeeeeecccchhhhHHHHHHhcccchHHHHHHH
Confidence 677778888887765554433 34556665221 222334555555655555544
No 18
>COG1835 Predicted acyltransferases [Lipid metabolism]
Probab=43.61 E-value=6 Score=41.66 Aligned_cols=49 Identities=12% Similarity=0.038 Sum_probs=29.8
Q ss_pred CCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHh
Q 010822 381 LYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLG 431 (500)
Q Consensus 381 LWT~SfVL~TaG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nal~vYv~s 431 (500)
.+-..-++...|.++++++....--. +...-.++..+.|.=|=-+|+.|
T Consensus 263 ~~~~~~~~~~l~~~~li~~~~~~~~~--~~~l~~~~~~~lG~~SYslYL~H 311 (386)
T COG1835 263 FPGDLLLVPSLGAALLVLAVAALVGG--SRLLSSRPLVFLGDISYSLYLWH 311 (386)
T ss_pred cchhHHHHHHHHHHHHHHhhcccccc--ccccccccHHHHHHHHHHHHHHH
Confidence 34444444555555555554333322 12223578999999999999999
No 19
>COG3619 Predicted membrane protein [Function unknown]
Probab=41.76 E-value=65 Score=32.37 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=43.7
Q ss_pred ccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCCChhHHHHHHHHHHHHHHHHHHHHhc
Q 010822 95 IDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIFRTLKLLFWGIILQG 154 (500)
Q Consensus 95 l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~~~~~~~~kil~Rsl~LfllGl~l~~ 154 (500)
++=+++|....-+++.|.+.|++|++..--++|+..+ ...-.+.+...++.+++.+..
T Consensus 48 i~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~--~~~~~l~~~~~ll~~~v~~~~ 105 (226)
T COG3619 48 IELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR--SFIPVLLLVSLLLALIALLAL 105 (226)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHHHHHH
Confidence 4556668888899999999999999988888776544 333455677777777777753
No 20
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.
Probab=35.90 E-value=89 Score=30.21 Aligned_cols=19 Identities=16% Similarity=0.494 Sum_probs=17.2
Q ss_pred cchhhhhcchhHHHHHHHh
Q 010822 413 PFLFLKWIGMNAMLVFVLG 431 (500)
Q Consensus 413 ~~~pf~~~G~Nal~vYv~s 431 (500)
...++.++|.++|++|++|
T Consensus 203 ~~~~l~~~G~~sL~iY~~h 221 (223)
T PF07786_consen 203 LIRPLAFLGRHSLLIYLIH 221 (223)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4578999999999999998
No 21
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=35.20 E-value=3e+02 Score=30.35 Aligned_cols=125 Identities=17% Similarity=0.181 Sum_probs=65.2
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCc-hhHHHHHh--H
Q 010822 318 EPEGLLSTISAILSGTIGIHYGHVLIHFKG--HSARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYS-FSYVCFTA--G 392 (500)
Q Consensus 318 DPEGlLStlpai~~~llG~~aG~~L~~~~~--~~~rl~~~l~~G~~llilG~ll~~~~~~PiNK~LWT-~SfVL~Ta--G 392 (500)
---|++|.+|-++..+..+.+|.+-.+-+. ..++.++-+.-.+..+..|..+-. ++.-++-+. .+.+++|. +
T Consensus 294 ~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~---l~~~~~~~~~~a~~~l~~~~~ 370 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLV---LAFTSDEHRLLAVILLTIAIG 370 (466)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHe---eeecCCCcchHHHHHHHHHHH
Confidence 356899999999999999999987643222 323322222233333333333321 232222222 45555555 4
Q ss_pred HHHHHHHHHHHHH-H-hcCccccchhhhhcchhHHHHHHHhhhhhhhhhhccceecCCCcchHHH
Q 010822 393 AAGIVFSALYVLM-D-VWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFVNGWYYKNPDNTLVNW 455 (500)
Q Consensus 393 ~a~l~La~~y~li-D-v~~~~~~~~pf~~~G~Nal~vYv~s~~~ll~~~l~~~~~~~~~~~l~~~ 455 (500)
...+..+.+|.-. | -.++ -=.++|++.....+.. ++.+.+...-.+ +++..+|
T Consensus 371 ~~g~~~~Gf~~~~~~~apq~-----a~~l~g~~~~~~~~~~---~~~P~~vg~~~~--~~t~~eW 425 (466)
T KOG2532|consen 371 LSGFNISGFYKNHQDIAPQH-----AGFVMGIINFVGALAG---FIAPLLVGIIVT--DNTREEW 425 (466)
T ss_pred HcccchhhhHhhhhhccchH-----HHHHHHHHHHHHHHHH---HHHHHheeeEeC--CCCHHHH
Confidence 4444445555443 4 2222 2345788887777644 555555444333 2255566
No 22
>PF13828 DUF4190: Domain of unknown function (DUF4190)
Probab=29.06 E-value=98 Score=24.86 Aligned_cols=49 Identities=27% Similarity=0.398 Sum_probs=24.8
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHH
Q 010822 321 GLLSTISAILSGTIGIHYGHVLIH-FKGHSARLKHWVSMGFGLLIIAIIL 369 (500)
Q Consensus 321 GlLStlpai~~~llG~~aG~~L~~-~~~~~~rl~~~l~~G~~llilG~ll 369 (500)
|++|.+......+.|+..|+.=++ -+...++=+.+...|+++..++.++
T Consensus 9 gi~~~~~~~~~~i~aiilG~ial~~i~r~~~~G~g~A~aGivlG~i~~~~ 58 (62)
T PF13828_consen 9 GILGLFLCGLLGIVAIILGHIALRQIRRSGQRGRGMAIAGIVLGYIGIVL 58 (62)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHH
Confidence 345533333455556666665322 1111234455667777776666554
No 23
>KOG3700 consensus Predicted acyltransferase [General function prediction only]
Probab=24.68 E-value=6.7e+02 Score=29.41 Aligned_cols=65 Identities=26% Similarity=0.385 Sum_probs=42.2
Q ss_pred cchhhhhhhhhhhHhhhcc----ceEEE--EcCCCCCCC----cccCCCCCCCCcchhhHHHHHHHHHHHHHhhhccCC
Q 010822 61 KRVATLDAFRGLTVVWVYT----QLMIL--VDDAGGAYA----RIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVP 129 (500)
Q Consensus 61 ~Rl~SLDvfRGltia~~~~----~lMIl--VN~~G~~y~----~l~Ha~WnG~t~aDlVfP~FLFivGvsi~lSl~~~~ 129 (500)
+=+.+||-+|.+++.|++. ..|.+ +||.....+ +..|=-=|+..-.| .|+|+.|.-.++++-|+.
T Consensus 267 ~~I~~L~giR~lS~~WVi~gH~~~~~~~~~~~n~~~~~~~~~~~~~~l~~na~lsVD----tFf~lSG~l~a~~~fk~~ 341 (705)
T KOG3700|consen 267 GFIDCLDGIRFLSMFWVVFGHTFNFLQFSPVDNLASLLAFVESLWTHLILNASLSVD----TFFFLSGLLLAYLFFKKK 341 (705)
T ss_pred CcceeecchheeeeeEEEeccEEEEEeccccccHHHHHHHHHhhHHHHHHhcchhhh----HHHHHHHHHHHHHHHhcc
Confidence 3599999999999999772 22233 266654332 12230015555556 488999999999996554
No 24
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=21.00 E-value=2.9e+02 Score=24.44 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=19.7
Q ss_pred CCCcchhhhhHH--HHHHHHHHHHHHHHhc
Q 010822 317 FEPEGLLSTISA--ILSGTIGIHYGHVLIH 344 (500)
Q Consensus 317 fDPEGlLStlpa--i~~~llG~~aG~~L~~ 344 (500)
+.--|++|+|+. ++.+++|+..|++|.+
T Consensus 39 ~~~l~~~g~IG~~~v~pil~G~~lG~WLD~ 68 (100)
T TIGR02230 39 WEGLGMFGLIGWSVAIPTLLGVAVGIWLDR 68 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455566776654 4578889999999854
Done!