Query 010825
Match_columns 500
No_of_seqs 133 out of 1394
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:03:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010825.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010825hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.9E-69 6.4E-74 547.5 39.2 440 8-490 11-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.9E-67 2E-71 539.8 43.5 471 8-490 6-478 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 2.3E-62 7.8E-67 500.8 40.3 443 8-491 5-452 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 8.4E-61 2.9E-65 492.3 45.4 445 9-491 5-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.2E-58 7.5E-63 472.6 43.3 438 9-490 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.3E-44 4.3E-49 368.5 35.7 398 8-488 10-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 5E-43 1.7E-47 353.8 24.6 349 8-470 20-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 5E-42 1.7E-46 348.2 26.4 382 11-492 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3E-41 1E-45 342.6 22.1 382 11-492 1-402 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-39 5.8E-44 329.6 31.6 381 9-489 19-412 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 4.8E-40 1.6E-44 332.2 24.6 376 11-489 1-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.4E-38 1.2E-42 318.4 34.5 382 11-490 5-398 (402)
13 2p6p_A Glycosyl transferase; X 100.0 7.7E-38 2.6E-42 314.2 30.4 363 11-492 1-381 (384)
14 2iyf_A OLED, oleandomycin glyc 100.0 2.9E-37 1E-41 314.7 32.6 381 9-488 6-397 (430)
15 2yjn_A ERYCIII, glycosyltransf 100.0 8.1E-38 2.8E-42 319.7 26.8 375 9-488 19-433 (441)
16 4fzr_A SSFS6; structural genom 100.0 2.3E-35 7.8E-40 297.6 24.6 351 8-470 13-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.6E-34 8.8E-39 289.9 26.8 352 9-489 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.5E-33 1.5E-37 280.1 27.0 360 10-487 1-385 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.8E-31 1.3E-35 267.8 32.2 368 8-489 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.7E-27 1.3E-31 234.1 25.0 310 10-453 2-326 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3.5E-26 1.2E-30 201.9 15.1 161 288-469 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.9E-19 2.7E-23 174.1 29.0 334 10-492 6-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.9E-14 1E-18 134.5 20.1 114 301-427 156-272 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 6.7E-15 2.3E-19 133.2 9.2 131 300-448 26-196 (224)
25 3ot5_A UDP-N-acetylglucosamine 99.4 1.4E-11 4.6E-16 123.4 20.9 160 301-489 223-392 (403)
26 3dzc_A UDP-N-acetylglucosamine 99.4 1.7E-10 5.7E-15 115.3 24.9 131 301-453 229-369 (396)
27 3okp_A GDP-mannose-dependent a 99.3 1.3E-09 4.6E-14 108.3 31.1 348 8-492 2-379 (394)
28 3c48_A Predicted glycosyltrans 99.3 1.7E-09 5.9E-14 109.4 32.2 117 359-493 305-429 (438)
29 1v4v_A UDP-N-acetylglucosamine 99.3 3.6E-10 1.2E-14 112.1 24.6 129 302-453 198-336 (376)
30 1vgv_A UDP-N-acetylglucosamine 99.3 7.3E-10 2.5E-14 110.1 24.8 130 302-453 205-344 (384)
31 3fro_A GLGA glycogen synthase; 99.3 9.4E-09 3.2E-13 103.7 32.3 393 9-492 1-430 (439)
32 2gek_A Phosphatidylinositol ma 99.2 1.3E-08 4.5E-13 101.6 30.6 128 304-453 209-351 (406)
33 2jjm_A Glycosyl transferase, g 99.2 7.3E-08 2.5E-12 95.9 33.8 350 10-492 15-385 (394)
34 2r60_A Glycosyl transferase, g 99.2 1.5E-08 5.1E-13 104.5 28.6 93 359-464 334-438 (499)
35 3beo_A UDP-N-acetylglucosamine 99.1 1.2E-08 4.2E-13 100.8 25.5 132 302-453 205-344 (375)
36 2iw1_A Lipopolysaccharide core 99.1 2.1E-07 7.2E-12 91.7 33.1 142 303-466 196-353 (374)
37 4hwg_A UDP-N-acetylglucosamine 99.1 7.7E-09 2.6E-13 102.5 22.0 316 11-453 10-344 (385)
38 2iuy_A Avigt4, glycosyltransfe 99.1 7.5E-09 2.6E-13 101.1 21.7 122 305-450 164-307 (342)
39 2x6q_A Trehalose-synthase TRET 98.9 1.9E-07 6.4E-12 93.7 22.7 109 360-490 293-412 (416)
40 1rzu_A Glycogen synthase 1; gl 98.6 2.4E-05 8.1E-10 79.9 29.3 161 304-492 292-475 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 2E-06 6.9E-11 92.5 19.9 81 360-453 640-736 (816)
42 2vsy_A XCC0866; transferase, g 98.6 6.7E-05 2.3E-09 78.3 30.4 84 360-453 434-524 (568)
43 2qzs_A Glycogen synthase; glyc 98.6 4.4E-05 1.5E-09 78.0 28.3 162 303-492 292-476 (485)
44 3oy2_A Glycosyltransferase B73 98.4 6.6E-05 2.3E-09 74.8 25.0 77 362-453 256-357 (413)
45 2f9f_A First mannosyl transfer 98.3 4.6E-06 1.6E-10 72.9 12.0 139 304-465 24-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.2 0.00049 1.7E-08 67.7 25.9 97 361-469 261-364 (374)
47 2hy7_A Glucuronosyltransferase 98.2 0.00013 4.3E-09 72.8 21.3 76 359-453 264-354 (406)
48 2x0d_A WSAF; GT4 family, trans 98.0 0.0007 2.4E-08 67.5 20.7 81 359-453 294-381 (413)
49 3qhp_A Type 1 capsular polysac 97.7 0.00018 6.2E-09 61.6 10.7 139 303-465 2-155 (166)
50 3vue_A GBSS-I, granule-bound s 97.5 0.019 6.4E-07 59.1 23.7 137 304-450 328-476 (536)
51 4gyw_A UDP-N-acetylglucosamine 97.5 0.0035 1.2E-07 67.1 18.6 135 301-453 521-670 (723)
52 3tov_A Glycosyl transferase fa 97.4 0.0022 7.6E-08 62.3 14.7 110 4-149 2-115 (349)
53 3q3e_A HMW1C-like glycosyltran 97.4 0.0026 8.7E-08 65.6 14.7 135 303-453 441-590 (631)
54 2bfw_A GLGA glycogen synthase; 97.3 0.0035 1.2E-07 55.2 13.2 79 361-453 96-183 (200)
55 3rhz_A GTF3, nucleotide sugar 97.2 0.00069 2.4E-08 65.5 7.9 111 361-489 215-337 (339)
56 1psw_A ADP-heptose LPS heptosy 97.2 0.087 3E-06 50.6 23.0 103 11-149 1-106 (348)
57 2gt1_A Lipopolysaccharide hept 96.0 0.21 7.3E-06 47.4 16.3 45 11-55 1-47 (326)
58 3ty2_A 5'-nucleotidase SURE; s 92.5 0.13 4.5E-06 46.7 5.0 43 8-52 9-51 (261)
59 1j9j_A Stationary phase surviV 89.7 1.3 4.4E-05 40.0 8.7 40 11-52 1-40 (247)
60 1g5t_A COB(I)alamin adenosyltr 89.0 4.3 0.00015 35.1 11.2 99 9-134 27-131 (196)
61 2phj_A 5'-nucleotidase SURE; S 89.0 1.7 5.9E-05 39.2 8.9 40 11-52 2-41 (251)
62 2wqk_A 5'-nucleotidase SURE; S 87.9 1.8 6E-05 39.3 8.3 39 12-52 3-41 (251)
63 2e6c_A 5'-nucleotidase SURE; S 87.8 3.6 0.00012 37.0 10.1 58 11-75 1-58 (244)
64 1uqt_A Alpha, alpha-trehalose- 86.4 4.3 0.00015 40.7 11.1 107 364-492 336-454 (482)
65 3t5t_A Putative glycosyltransf 85.0 6.6 0.00023 39.4 11.5 110 361-492 353-473 (496)
66 3bfv_A CAPA1, CAPB2, membrane 84.5 4.2 0.00014 37.3 9.2 41 9-49 80-122 (271)
67 1l5x_A SurviVal protein E; str 84.0 4.6 0.00016 37.1 9.0 40 11-52 1-40 (280)
68 2v4n_A Multifunctional protein 82.9 3.2 0.00011 37.6 7.4 40 11-52 2-41 (254)
69 3cio_A ETK, tyrosine-protein k 82.0 6.1 0.00021 36.8 9.4 39 10-48 103-143 (299)
70 3zqu_A Probable aromatic acid 80.1 2.7 9.1E-05 36.9 5.7 46 10-56 4-49 (209)
71 3auf_A Glycinamide ribonucleot 79.1 24 0.00084 31.2 11.8 106 8-153 20-132 (229)
72 3lqk_A Dipicolinate synthase s 77.7 2.1 7.2E-05 37.3 4.3 45 8-52 5-49 (201)
73 3fgn_A Dethiobiotin synthetase 77.2 13 0.00046 33.4 9.7 38 9-46 24-63 (251)
74 1ccw_A Protein (glutamate muta 77.0 3.9 0.00013 33.2 5.5 41 9-49 2-42 (137)
75 3la6_A Tyrosine-protein kinase 76.8 12 0.0004 34.6 9.5 40 10-49 91-132 (286)
76 3nb0_A Glycogen [starch] synth 76.8 4.7 0.00016 42.1 7.1 40 365-406 498-550 (725)
77 4dzz_A Plasmid partitioning pr 75.7 17 0.00059 31.0 9.9 38 12-49 2-41 (206)
78 3qjg_A Epidermin biosynthesis 75.6 3.8 0.00013 34.8 5.2 43 11-54 6-48 (175)
79 1sbz_A Probable aromatic acid 75.0 4 0.00014 35.4 5.2 45 11-56 1-46 (197)
80 1mvl_A PPC decarboxylase athal 73.9 4.3 0.00015 35.6 5.2 46 8-55 17-62 (209)
81 3qxc_A Dethiobiotin synthetase 73.8 15 0.0005 33.0 9.0 36 11-46 21-58 (242)
82 3tqr_A Phosphoribosylglycinami 72.4 21 0.00072 31.3 9.4 107 7-153 2-114 (215)
83 1qzu_A Hypothetical protein MD 72.1 3.6 0.00012 36.0 4.3 48 7-55 16-64 (206)
84 2bw0_A 10-FTHFDH, 10-formyltet 71.8 14 0.00049 34.8 8.8 34 8-46 20-53 (329)
85 3zzm_A Bifunctional purine bio 69.2 14 0.00049 36.6 8.1 102 8-132 7-111 (523)
86 2ywr_A Phosphoribosylglycinami 69.1 36 0.0012 29.8 10.3 103 11-153 2-111 (216)
87 1p3y_1 MRSD protein; flavoprot 68.3 3.4 0.00012 35.8 3.3 46 9-55 7-52 (194)
88 2ejb_A Probable aromatic acid 67.9 8.5 0.00029 33.1 5.7 44 11-55 2-45 (189)
89 2yxb_A Coenzyme B12-dependent 67.1 5.9 0.0002 33.1 4.5 41 9-49 17-57 (161)
90 3dm5_A SRP54, signal recogniti 67.0 21 0.00073 35.1 9.1 42 10-51 100-141 (443)
91 3q9l_A Septum site-determining 67.0 37 0.0013 30.1 10.4 32 17-48 10-41 (260)
92 3vot_A L-amino acid ligase, BL 66.7 18 0.0006 35.4 8.7 38 6-48 1-38 (425)
93 1y80_A Predicted cobalamin bin 66.7 8.4 0.00029 33.6 5.7 43 9-51 87-129 (210)
94 1kjn_A MTH0777; hypotethical p 66.1 12 0.00041 30.4 5.7 49 8-56 4-54 (157)
95 3av3_A Phosphoribosylglycinami 64.2 59 0.002 28.3 10.6 103 11-153 4-113 (212)
96 3mcu_A Dipicolinate synthase, 63.8 7.2 0.00025 34.0 4.5 41 9-50 4-45 (207)
97 2i2x_B MTAC, methyltransferase 62.4 11 0.00038 34.1 5.7 40 8-47 121-160 (258)
98 3q0i_A Methionyl-tRNA formyltr 61.0 49 0.0017 30.9 10.0 35 8-47 5-39 (318)
99 1mio_A Nitrogenase molybdenum 60.5 62 0.0021 32.7 11.4 34 105-150 447-480 (533)
100 1g63_A Epidermin modifying enz 60.0 8.7 0.0003 32.8 4.2 44 11-55 3-46 (181)
101 3ug7_A Arsenical pump-driving 59.1 35 0.0012 32.3 8.9 45 11-56 26-71 (349)
102 3zq6_A Putative arsenical pump 59.0 18 0.0006 34.0 6.7 33 16-48 20-52 (324)
103 3ezx_A MMCP 1, monomethylamine 59.0 14 0.00047 32.5 5.5 44 8-51 90-133 (215)
104 1jkx_A GART;, phosphoribosylgl 58.7 90 0.0031 27.1 10.8 102 11-153 1-110 (212)
105 3pdi_B Nitrogenase MOFE cofact 58.7 28 0.00097 34.5 8.4 88 9-150 312-399 (458)
106 3iqw_A Tail-anchored protein t 57.5 75 0.0026 29.8 10.8 40 10-49 15-55 (334)
107 2r8r_A Sensor protein; KDPD, P 57.2 15 0.00051 32.5 5.4 40 9-48 5-44 (228)
108 2xxa_A Signal recognition part 56.7 35 0.0012 33.5 8.5 40 11-50 101-141 (433)
109 3tov_A Glycosyl transferase fa 56.3 34 0.0012 32.3 8.3 46 10-55 185-234 (349)
110 3gl9_A Response regulator; bet 55.9 19 0.00067 27.5 5.5 41 107-153 36-85 (122)
111 2ph1_A Nucleotide-binding prot 55.3 72 0.0025 28.4 10.1 34 17-50 26-59 (262)
112 2lpm_A Two-component response 55.3 7.1 0.00024 30.9 2.7 38 107-150 43-85 (123)
113 3to5_A CHEY homolog; alpha(5)b 55.3 15 0.0005 29.5 4.7 32 123-154 57-97 (134)
114 2pju_A Propionate catabolism o 54.8 13 0.00044 32.9 4.6 68 377-452 64-154 (225)
115 1id1_A Putative potassium chan 54.6 9.2 0.00031 31.2 3.5 34 9-47 2-35 (153)
116 2q5c_A NTRC family transcripti 54.4 9.6 0.00033 32.9 3.6 29 376-407 51-79 (196)
117 2vqe_B 30S ribosomal protein S 54.0 79 0.0027 28.4 9.6 33 122-154 157-191 (256)
118 4ds3_A Phosphoribosylglycinami 53.9 77 0.0026 27.5 9.4 106 8-153 5-117 (209)
119 2i2c_A Probable inorganic poly 53.3 11 0.00036 34.6 4.0 53 377-452 36-94 (272)
120 1fmt_A Methionyl-tRNA FMet for 52.8 52 0.0018 30.6 8.7 34 9-47 2-35 (314)
121 4b4o_A Epimerase family protei 52.8 15 0.00051 33.7 5.0 33 11-47 1-33 (298)
122 3l7i_A Teichoic acid biosynthe 52.6 19 0.00064 38.2 6.3 113 365-491 604-720 (729)
123 2woo_A ATPase GET3; tail-ancho 52.3 70 0.0024 29.9 9.7 42 13-55 22-63 (329)
124 1meo_A Phosophoribosylglycinam 52.0 1.2E+02 0.004 26.3 10.6 103 11-153 1-110 (209)
125 4dim_A Phosphoribosylglycinami 51.5 68 0.0023 30.7 9.8 35 8-47 5-39 (403)
126 3mc3_A DSRE/DSRF-like family p 51.5 29 0.00098 27.7 5.9 41 11-51 16-59 (134)
127 3tl4_X Glutaminyl-tRNA synthet 51.2 23 0.00079 30.2 5.4 68 412-490 103-178 (187)
128 2gt1_A Lipopolysaccharide hept 50.8 55 0.0019 30.3 8.7 41 10-50 178-223 (326)
129 2yvq_A Carbamoyl-phosphate syn 50.4 78 0.0027 25.5 8.4 100 9-149 23-130 (143)
130 2nly_A BH1492 protein, diverge 50.2 1.2E+02 0.0041 27.0 10.2 38 104-149 115-155 (245)
131 3da8_A Probable 5'-phosphoribo 49.9 55 0.0019 28.6 7.8 38 8-48 10-48 (215)
132 3kjh_A CO dehydrogenase/acetyl 49.3 12 0.00041 33.2 3.6 38 11-48 1-38 (254)
133 1eiw_A Hypothetical protein MT 49.1 32 0.0011 26.5 5.5 65 374-450 36-109 (111)
134 3k96_A Glycerol-3-phosphate de 48.3 10 0.00035 36.3 3.1 42 2-48 21-62 (356)
135 1psw_A ADP-heptose LPS heptosy 47.2 1.6E+02 0.0055 27.1 11.6 43 10-52 180-227 (348)
136 1lss_A TRK system potassium up 47.1 26 0.00088 27.5 5.0 33 10-47 4-36 (140)
137 2l2q_A PTS system, cellobiose- 46.4 19 0.00067 27.5 3.9 37 8-44 2-38 (109)
138 3igf_A ALL4481 protein; two-do 46.4 20 0.00067 34.5 4.8 35 12-46 3-38 (374)
139 3tqq_A Methionyl-tRNA formyltr 46.1 82 0.0028 29.3 8.9 34 10-48 2-35 (314)
140 1b93_A Protein (methylglyoxal 45.8 59 0.002 26.6 6.8 105 1-150 1-119 (152)
141 4eg0_A D-alanine--D-alanine li 45.6 29 0.001 32.2 5.8 39 10-48 13-55 (317)
142 3t6k_A Response regulator rece 45.2 31 0.0011 26.9 5.2 31 123-153 48-87 (136)
143 3f6p_A Transcriptional regulat 44.0 37 0.0013 25.7 5.4 31 123-153 46-82 (120)
144 2g1u_A Hypothetical protein TM 42.9 27 0.00093 28.4 4.6 36 8-48 17-52 (155)
145 3u7q_B Nitrogenase molybdenum- 42.3 1.9E+02 0.0065 29.0 11.5 34 9-47 363-396 (523)
146 3s2u_A UDP-N-acetylglucosamine 42.2 54 0.0019 31.1 7.3 98 302-403 3-120 (365)
147 3qvl_A Putative hydantoin race 42.1 78 0.0027 28.2 7.8 37 11-47 2-39 (245)
148 1xmp_A PURE, phosphoribosylami 42.0 1.5E+02 0.0051 24.6 11.3 143 302-471 11-162 (170)
149 3n0v_A Formyltetrahydrofolate 41.8 2E+02 0.007 26.1 11.0 105 8-153 88-197 (286)
150 4gmf_A Yersiniabactin biosynth 41.3 64 0.0022 30.8 7.6 62 366-427 56-124 (372)
151 1qgu_B Protein (nitrogenase mo 41.1 1.4E+02 0.0046 30.0 10.2 35 9-48 359-393 (519)
152 3o1l_A Formyltetrahydrofolate 41.0 2.2E+02 0.0074 26.2 11.0 105 8-153 103-212 (302)
153 2pk3_A GDP-6-deoxy-D-LYXO-4-he 40.8 19 0.00066 33.3 3.7 44 1-47 1-45 (321)
154 2q5c_A NTRC family transcripti 40.5 29 0.00099 29.8 4.5 41 104-153 129-169 (196)
155 3end_A Light-independent proto 40.0 31 0.0011 31.7 5.1 40 9-48 40-79 (307)
156 3gpi_A NAD-dependent epimerase 39.8 31 0.0011 31.2 4.9 33 10-47 3-35 (286)
157 2lnd_A De novo designed protei 39.6 31 0.0011 24.4 3.6 50 396-450 49-100 (112)
158 3m6m_D Sensory/regulatory prot 39.5 33 0.0011 27.1 4.5 31 123-153 58-99 (143)
159 3dfu_A Uncharacterized protein 39.1 21 0.00072 31.7 3.4 34 8-46 4-37 (232)
160 3q2i_A Dehydrogenase; rossmann 38.4 2.5E+02 0.0085 26.1 11.4 108 303-427 15-131 (354)
161 2qs7_A Uncharacterized protein 38.3 43 0.0015 27.1 5.0 46 10-55 8-53 (144)
162 2qyt_A 2-dehydropantoate 2-red 37.9 13 0.00044 34.5 2.0 36 6-46 4-45 (317)
163 2iz6_A Molybdenum cofactor car 37.6 44 0.0015 28.2 5.0 135 288-450 33-173 (176)
164 2w36_A Endonuclease V; hypoxan 37.3 14 0.00047 32.6 1.9 41 104-151 91-138 (225)
165 1dbw_A Transcriptional regulat 36.9 62 0.0021 24.5 5.7 41 107-153 37-84 (126)
166 3euw_A MYO-inositol dehydrogen 36.6 2.6E+02 0.0089 25.8 12.1 108 303-427 6-121 (344)
167 3s40_A Diacylglycerol kinase; 36.4 82 0.0028 29.0 7.3 80 304-406 12-97 (304)
168 2gk4_A Conserved hypothetical 36.0 58 0.002 28.8 5.8 23 26-48 31-53 (232)
169 3gt7_A Sensor protein; structu 35.9 54 0.0018 26.1 5.4 31 123-153 51-90 (154)
170 1e2b_A Enzyme IIB-cellobiose; 35.8 65 0.0022 24.4 5.4 37 10-46 3-39 (106)
171 3g1w_A Sugar ABC transporter; 35.6 2.4E+02 0.0082 25.1 11.0 29 123-151 61-93 (305)
172 3c3m_A Response regulator rece 35.3 55 0.0019 25.4 5.2 31 123-153 47-86 (138)
173 1zu4_A FTSY; GTPase, signal re 35.0 1.8E+02 0.0062 26.9 9.5 41 10-50 105-145 (320)
174 3ghy_A Ketopantoate reductase 35.0 31 0.0011 32.4 4.1 41 10-55 3-43 (335)
175 1qkk_A DCTD, C4-dicarboxylate 34.9 67 0.0023 25.5 5.8 49 397-452 74-122 (155)
176 1yt5_A Inorganic polyphosphate 34.7 17 0.00059 32.8 2.2 54 376-452 41-97 (258)
177 3kl4_A SRP54, signal recogniti 34.6 45 0.0016 32.7 5.3 41 10-50 97-137 (433)
178 2a33_A Hypothetical protein; s 34.5 48 0.0017 28.9 5.0 40 8-47 10-54 (215)
179 1pq4_A Periplasmic binding pro 34.3 2.1E+02 0.0073 26.0 9.7 45 104-154 224-270 (291)
180 1p9o_A Phosphopantothenoylcyst 34.0 27 0.00093 32.5 3.4 23 26-48 67-89 (313)
181 3hn2_A 2-dehydropantoate 2-red 33.8 53 0.0018 30.4 5.5 39 11-55 3-41 (312)
182 1hdo_A Biliverdin IX beta redu 33.7 69 0.0024 26.8 6.0 34 11-48 4-37 (206)
183 2etv_A Iron(III) ABC transport 33.6 42 0.0014 31.6 4.8 29 123-151 96-125 (346)
184 3obi_A Formyltetrahydrofolate 33.3 2.8E+02 0.0095 25.2 10.2 108 8-153 87-197 (288)
185 1u0t_A Inorganic polyphosphate 33.3 20 0.00067 33.4 2.4 32 373-406 72-107 (307)
186 1rpn_A GDP-mannose 4,6-dehydra 33.2 45 0.0015 30.9 5.0 39 5-47 9-47 (335)
187 3nhm_A Response regulator; pro 33.1 70 0.0024 24.3 5.5 30 123-152 47-85 (133)
188 3l4e_A Uncharacterized peptida 33.0 1.4E+02 0.0049 25.6 7.8 46 292-337 18-63 (206)
189 2an1_A Putative kinase; struct 32.9 22 0.00074 32.7 2.6 32 372-405 59-94 (292)
190 3bul_A Methionine synthase; tr 32.9 52 0.0018 33.5 5.6 43 9-51 97-139 (579)
191 3hwr_A 2-dehydropantoate 2-red 32.9 38 0.0013 31.5 4.3 42 9-55 18-59 (318)
192 1y1p_A ARII, aldehyde reductas 32.8 63 0.0022 29.8 6.0 41 3-47 4-44 (342)
193 3gi1_A LBP, laminin-binding pr 32.4 1.4E+02 0.0048 27.2 8.1 43 104-152 215-259 (286)
194 4hkt_A Inositol 2-dehydrogenas 32.4 3E+02 0.01 25.2 11.2 107 303-427 5-119 (331)
195 3goc_A Endonuclease V; alpha-b 32.2 55 0.0019 29.0 4.8 41 104-151 95-142 (237)
196 2o1e_A YCDH; alpha-beta protei 32.2 1.9E+02 0.0065 26.7 9.0 44 103-152 225-270 (312)
197 1rh1_A Colicin B; FEPA, cytoto 32.2 43 0.0015 32.4 4.4 43 454-499 341-383 (511)
198 3a10_A Response regulator; pho 32.1 79 0.0027 23.3 5.5 31 123-153 45-82 (116)
199 2hy5_A Putative sulfurtransfer 32.0 88 0.003 24.5 5.8 38 15-52 6-46 (130)
200 3db2_A Putative NADPH-dependen 32.0 2.2E+02 0.0076 26.5 9.8 108 303-427 7-122 (354)
201 3i83_A 2-dehydropantoate 2-red 31.9 55 0.0019 30.3 5.3 40 11-56 3-42 (320)
202 1q74_A 1D-MYO-inosityl 2-aceta 31.8 50 0.0017 30.6 4.9 35 11-46 5-40 (303)
203 3e5n_A D-alanine-D-alanine lig 31.7 31 0.0011 33.2 3.6 44 4-47 16-63 (386)
204 3afo_A NADH kinase POS5; alpha 31.4 90 0.0031 30.0 6.7 35 369-405 107-146 (388)
205 3m2t_A Probable dehydrogenase; 31.3 3.3E+02 0.011 25.4 11.0 109 303-427 7-124 (359)
206 1wcv_1 SOJ, segregation protei 31.1 37 0.0013 30.3 3.9 41 9-49 4-46 (257)
207 1tmy_A CHEY protein, TMY; chem 31.1 63 0.0021 24.1 4.8 32 123-154 47-85 (120)
208 2bru_C NAD(P) transhydrogenase 31.0 50 0.0017 27.5 4.0 38 11-48 31-71 (186)
209 3eod_A Protein HNR; response r 30.9 66 0.0022 24.4 4.9 32 123-154 51-89 (130)
210 3lyh_A Cobalamin (vitamin B12) 30.9 1.2E+02 0.0041 23.4 6.5 37 302-338 6-42 (126)
211 3lou_A Formyltetrahydrofolate 30.7 3.1E+02 0.011 25.0 11.8 105 8-153 93-202 (292)
212 4g6h_A Rotenone-insensitive NA 30.5 25 0.00087 35.2 2.8 36 8-48 40-75 (502)
213 3e8x_A Putative NAD-dependent 30.5 60 0.0021 28.2 5.1 37 8-48 19-55 (236)
214 4e7p_A Response regulator; DNA 30.5 70 0.0024 25.2 5.2 42 107-154 56-104 (150)
215 4ehi_A Bifunctional purine bio 30.4 65 0.0022 32.1 5.5 33 22-56 32-64 (534)
216 4hn9_A Iron complex transport 30.4 61 0.0021 30.2 5.4 31 123-153 116-146 (335)
217 3qjg_A Epidermin biosynthesis 30.1 2.2E+02 0.0076 23.7 8.2 114 303-425 7-143 (175)
218 2rjn_A Response regulator rece 29.9 65 0.0022 25.5 4.9 42 107-154 41-89 (154)
219 2qxy_A Response regulator; reg 29.8 71 0.0024 24.7 5.0 40 107-153 38-84 (142)
220 3g0o_A 3-hydroxyisobutyrate de 29.7 31 0.0011 31.8 3.1 35 8-47 5-39 (303)
221 2obn_A Hypothetical protein; s 29.6 2.9E+02 0.0098 26.0 9.7 40 11-50 153-193 (349)
222 3n7t_A Macrophage binding prot 29.6 1.1E+02 0.0037 27.3 6.6 38 11-48 10-58 (247)
223 3f67_A Putative dienelactone h 29.5 70 0.0024 27.3 5.4 37 10-46 31-67 (241)
224 3kht_A Response regulator; PSI 29.4 93 0.0032 24.1 5.7 42 107-154 41-91 (144)
225 2bon_A Lipid kinase; DAG kinas 29.4 95 0.0032 29.0 6.5 78 304-406 33-118 (332)
226 2r85_A PURP protein PF1517; AT 29.3 44 0.0015 31.0 4.2 34 10-49 2-35 (334)
227 1ehi_A LMDDL2, D-alanine:D-lac 29.3 51 0.0018 31.5 4.7 39 9-47 2-45 (377)
228 2a9o_A Response regulator; ess 29.2 75 0.0026 23.5 4.9 32 123-154 45-82 (120)
229 4hcj_A THIJ/PFPI domain protei 29.0 56 0.0019 27.4 4.4 44 4-48 2-45 (177)
230 2vo1_A CTP synthase 1; pyrimid 29.0 62 0.0021 29.3 4.6 42 8-49 20-64 (295)
231 2xw6_A MGS, methylglyoxal synt 28.9 96 0.0033 24.7 5.4 95 11-150 4-111 (134)
232 2pju_A Propionate catabolism o 28.7 51 0.0017 29.0 4.1 39 104-151 141-179 (225)
233 3grc_A Sensor protein, kinase; 28.7 70 0.0024 24.7 4.8 41 107-153 40-89 (140)
234 2qv7_A Diacylglycerol kinase D 28.7 61 0.0021 30.4 5.1 81 304-406 28-114 (337)
235 3uug_A Multiple sugar-binding 28.6 3.3E+02 0.011 24.5 11.5 29 123-151 59-91 (330)
236 4hb9_A Similarities with proba 28.4 35 0.0012 32.6 3.4 29 11-44 2-30 (412)
237 3ia7_A CALG4; glycosysltransfe 28.4 1.4E+02 0.0049 28.0 7.9 35 303-339 6-40 (402)
238 3b2n_A Uncharacterized protein 28.2 63 0.0021 24.8 4.4 42 107-154 39-87 (133)
239 4e5s_A MCCFLIKE protein (BA_56 28.0 95 0.0033 29.1 6.2 72 316-406 63-136 (331)
240 2qzj_A Two-component response 28.0 71 0.0024 24.7 4.7 31 123-153 48-84 (136)
241 3lyu_A Putative hydrogenase; t 27.8 74 0.0025 25.4 4.7 36 10-48 18-53 (142)
242 3lrx_A Putative hydrogenase; a 27.6 55 0.0019 26.7 4.0 36 10-48 23-58 (158)
243 1q1v_A DEK protein; winged-hel 27.6 1.3E+02 0.0043 20.9 5.2 57 434-492 10-68 (70)
244 2pzm_A Putative nucleotide sug 27.5 69 0.0024 29.6 5.2 34 9-46 19-52 (330)
245 3cu5_A Two component transcrip 27.4 77 0.0026 24.7 4.8 39 107-151 39-84 (141)
246 1tvm_A PTS system, galactitol- 27.3 95 0.0033 23.7 5.1 37 9-45 20-57 (113)
247 1zgz_A Torcad operon transcrip 27.3 80 0.0027 23.5 4.8 31 123-153 46-82 (122)
248 1jbe_A Chemotaxis protein CHEY 27.2 1E+02 0.0035 23.1 5.5 41 107-153 39-88 (128)
249 2pl1_A Transcriptional regulat 27.1 1E+02 0.0036 22.7 5.5 32 123-154 44-82 (121)
250 3l77_A Short-chain alcohol deh 27.1 65 0.0022 28.0 4.7 34 11-47 2-35 (235)
251 3obi_A Formyltetrahydrofolate 27.0 1.8E+02 0.0063 26.5 7.8 103 321-449 156-260 (288)
252 3fwz_A Inner membrane protein 26.9 35 0.0012 27.1 2.6 34 10-48 7-40 (140)
253 1mxh_A Pteridine reductase 2; 26.8 63 0.0022 29.0 4.7 32 12-46 12-43 (276)
254 2r6j_A Eugenol synthase 1; phe 26.5 60 0.002 29.8 4.5 33 12-48 13-45 (318)
255 3nrb_A Formyltetrahydrofolate 26.5 1.8E+02 0.0063 26.5 7.7 103 321-449 155-259 (287)
256 1yio_A Response regulatory pro 26.5 84 0.0029 26.4 5.2 42 107-154 38-86 (208)
257 1jx7_A Hypothetical protein YC 26.4 1.2E+02 0.004 22.9 5.6 32 22-53 16-49 (117)
258 3nbm_A PTS system, lactose-spe 26.4 63 0.0021 24.7 3.8 38 8-45 4-41 (108)
259 1bg6_A N-(1-D-carboxylethyl)-L 26.4 43 0.0015 31.5 3.5 33 10-47 4-36 (359)
260 4dll_A 2-hydroxy-3-oxopropiona 26.2 71 0.0024 29.6 5.0 34 9-47 30-63 (320)
261 2qr3_A Two-component system re 26.1 98 0.0034 23.7 5.2 42 107-154 37-90 (140)
262 2wm1_A 2-amino-3-carboxymucona 26.1 1E+02 0.0035 28.6 6.1 48 289-339 126-176 (336)
263 1xhf_A DYE resistance, aerobic 26.0 95 0.0032 23.1 5.0 31 123-153 47-83 (123)
264 1cp2_A CP2, nitrogenase iron p 26.0 67 0.0023 28.6 4.6 36 12-47 3-38 (269)
265 3crn_A Response regulator rece 25.9 88 0.003 23.9 4.9 31 123-153 47-84 (132)
266 3kbq_A Protein TA0487; structu 25.9 1.8E+02 0.0061 24.2 6.8 83 303-406 5-97 (172)
267 3psh_A Protein HI_1472; substr 25.8 57 0.002 30.2 4.3 29 123-151 84-113 (326)
268 1e4e_A Vancomycin/teicoplanin 25.8 47 0.0016 31.2 3.7 39 9-47 2-44 (343)
269 3ga2_A Endonuclease V; alpha-b 25.8 68 0.0023 28.6 4.3 40 104-150 97-143 (246)
270 1o97_C Electron transferring f 25.8 92 0.0031 28.1 5.4 39 105-152 103-147 (264)
271 2i87_A D-alanine-D-alanine lig 25.8 37 0.0013 32.2 3.0 39 9-47 2-44 (364)
272 3cg0_A Response regulator rece 25.7 82 0.0028 24.1 4.7 32 123-154 54-92 (140)
273 3cz5_A Two-component response 25.7 1.1E+02 0.0039 23.9 5.7 32 123-154 51-89 (153)
274 2q8p_A Iron-regulated surface 25.6 55 0.0019 29.1 4.0 30 123-152 60-90 (260)
275 4dqx_A Probable oxidoreductase 25.5 76 0.0026 28.6 5.0 34 11-47 27-60 (277)
276 3kb6_A D-lactate dehydrogenase 25.5 1.4E+02 0.0047 28.0 6.8 103 302-447 142-246 (334)
277 1col_A Colicin A; antibacteria 25.4 31 0.001 29.6 1.9 44 451-497 28-71 (204)
278 1zi8_A Carboxymethylenebutenol 25.3 87 0.003 26.5 5.2 36 11-46 28-63 (236)
279 3cx3_A Lipoprotein; zinc-bindi 25.3 1.8E+02 0.0063 26.3 7.5 43 103-151 212-256 (284)
280 1dhr_A Dihydropteridine reduct 25.2 72 0.0025 27.9 4.7 34 11-47 7-40 (241)
281 4e3z_A Putative oxidoreductase 25.2 71 0.0024 28.6 4.7 35 9-46 24-58 (272)
282 3rc1_A Sugar 3-ketoreductase; 25.0 2.9E+02 0.0098 25.7 9.1 109 303-427 29-145 (350)
283 3llv_A Exopolyphosphatase-rela 24.9 46 0.0016 26.3 2.9 33 11-48 7-39 (141)
284 2yvu_A Probable adenylyl-sulfa 24.8 1E+02 0.0036 25.5 5.4 43 5-47 8-50 (186)
285 1qkk_A DCTD, C4-dicarboxylate 24.8 82 0.0028 24.9 4.6 41 107-153 37-84 (155)
286 3l49_A ABC sugar (ribose) tran 24.7 3.6E+02 0.012 23.7 11.7 29 123-151 61-93 (291)
287 3rqi_A Response regulator prot 24.6 62 0.0021 26.8 3.9 42 107-154 41-89 (184)
288 3rkr_A Short chain oxidoreduct 24.5 87 0.003 27.8 5.1 33 12-47 30-62 (262)
289 1xrs_B D-lysine 5,6-aminomutas 24.3 50 0.0017 29.9 3.3 44 9-52 119-171 (262)
290 3sxp_A ADP-L-glycero-D-mannohe 24.3 1.2E+02 0.0043 28.2 6.4 43 1-47 1-45 (362)
291 3lte_A Response regulator; str 24.2 1.1E+02 0.0038 23.1 5.2 31 123-153 50-88 (132)
292 2jk1_A HUPR, hydrogenase trans 24.1 1E+02 0.0034 23.8 4.9 31 123-153 44-81 (139)
293 3sju_A Keto reductase; short-c 24.1 71 0.0024 28.8 4.5 36 9-47 22-57 (279)
294 4grd_A N5-CAIR mutase, phospho 24.0 1.1E+02 0.0039 25.4 5.1 38 7-45 9-48 (173)
295 3foj_A Uncharacterized protein 23.9 1.4E+02 0.0049 21.7 5.5 35 8-46 54-88 (100)
296 3lf2_A Short chain oxidoreduct 23.9 86 0.003 27.9 5.0 34 11-47 8-41 (265)
297 3eag_A UDP-N-acetylmuramate:L- 23.9 67 0.0023 30.0 4.3 34 10-47 4-37 (326)
298 3cfy_A Putative LUXO repressor 23.8 83 0.0029 24.3 4.4 31 123-153 48-85 (137)
299 1ks9_A KPA reductase;, 2-dehyd 23.8 55 0.0019 29.6 3.6 32 11-47 1-32 (291)
300 2cob_A LCOR protein; MLR2, KIA 23.7 1.4E+02 0.0048 20.7 4.7 27 434-463 12-39 (70)
301 3l6d_A Putative oxidoreductase 23.7 42 0.0014 31.0 2.8 35 8-47 7-41 (306)
302 2o23_A HADH2 protein; HSD17B10 23.7 1.1E+02 0.0036 27.1 5.5 33 12-47 13-45 (265)
303 2b4a_A BH3024; flavodoxin-like 23.7 84 0.0029 24.1 4.4 39 107-151 49-95 (138)
304 3oow_A Phosphoribosylaminoimid 23.6 3.1E+02 0.011 22.6 9.8 143 303-472 6-157 (166)
305 1p3y_1 MRSD protein; flavoprot 23.5 1.7E+02 0.0057 25.0 6.3 139 303-451 10-186 (194)
306 2fb6_A Conserved hypothetical 23.5 1.2E+02 0.004 23.4 4.9 41 11-51 8-52 (117)
307 3ip3_A Oxidoreductase, putativ 23.5 3.7E+02 0.013 24.7 9.6 63 365-427 54-125 (337)
308 3e18_A Oxidoreductase; dehydro 23.5 4.4E+02 0.015 24.5 10.2 107 303-427 7-121 (359)
309 4g9b_A Beta-PGM, beta-phosphog 23.4 1.7E+02 0.0059 25.3 6.9 94 27-151 100-193 (243)
310 2raf_A Putative dinucleotide-b 23.4 59 0.002 28.0 3.6 33 9-46 18-50 (209)
311 2ehd_A Oxidoreductase, oxidore 23.3 1E+02 0.0035 26.6 5.2 33 12-47 6-38 (234)
312 3of5_A Dethiobiotin synthetase 23.1 87 0.003 27.4 4.7 37 10-46 3-41 (228)
313 3sty_A Methylketone synthase 1 23.1 71 0.0024 27.7 4.2 35 12-46 13-47 (267)
314 3ego_A Probable 2-dehydropanto 23.0 76 0.0026 29.2 4.5 40 10-55 2-42 (307)
315 3o26_A Salutaridine reductase; 23.0 80 0.0027 28.7 4.6 37 9-48 10-46 (311)
316 3q9s_A DNA-binding response re 22.9 1.1E+02 0.0039 26.8 5.5 42 107-154 71-118 (249)
317 3kkl_A Probable chaperone prot 22.9 1.3E+02 0.0044 26.7 5.8 38 11-48 4-52 (244)
318 1n2z_A Vitamin B12 transport p 22.8 1.2E+02 0.0042 26.5 5.7 30 123-152 57-88 (245)
319 1vl0_A DTDP-4-dehydrorhamnose 22.8 49 0.0017 29.9 3.1 35 8-46 10-44 (292)
320 2afh_E Nitrogenase iron protei 22.8 84 0.0029 28.4 4.7 37 12-48 4-40 (289)
321 2ew2_A 2-dehydropantoate 2-red 22.7 55 0.0019 29.9 3.4 32 11-47 4-35 (316)
322 2j48_A Two-component sensor ki 22.5 1.1E+02 0.0038 22.2 4.7 31 123-153 45-84 (119)
323 3qrx_B Melittin; calcium-bindi 22.5 22 0.00074 18.8 0.3 17 387-403 1-17 (26)
324 3awd_A GOX2181, putative polyo 22.5 1E+02 0.0035 27.1 5.1 33 12-47 14-46 (260)
325 3fwy_A Light-independent proto 22.4 97 0.0033 28.7 5.1 38 11-48 49-86 (314)
326 3c97_A Signal transduction his 22.4 1.4E+02 0.0046 23.0 5.4 20 123-142 54-75 (140)
327 3i42_A Response regulator rece 22.3 80 0.0027 23.8 3.9 31 123-153 47-86 (127)
328 4egf_A L-xylulose reductase; s 22.3 88 0.003 27.9 4.7 34 11-47 20-53 (266)
329 1byi_A Dethiobiotin synthase; 22.3 95 0.0033 26.6 4.8 34 13-46 4-38 (224)
330 3pfb_A Cinnamoyl esterase; alp 22.2 1E+02 0.0036 26.7 5.2 37 11-47 46-84 (270)
331 1kgs_A DRRD, DNA binding respo 22.2 1.1E+02 0.0039 25.9 5.3 32 123-154 46-84 (225)
332 4da9_A Short-chain dehydrogena 22.1 1.1E+02 0.0037 27.6 5.3 33 11-46 29-61 (280)
333 1evy_A Glycerol-3-phosphate de 22.0 45 0.0015 31.6 2.7 31 12-47 17-47 (366)
334 1pno_A NAD(P) transhydrogenase 22.0 89 0.003 25.9 3.9 39 10-48 23-64 (180)
335 3md9_A Hemin-binding periplasm 22.0 74 0.0025 28.1 4.1 29 123-151 59-89 (255)
336 3i6i_A Putative leucoanthocyan 22.0 83 0.0029 29.3 4.6 37 8-48 8-44 (346)
337 1ydh_A AT5G11950; structural g 22.0 1.2E+02 0.004 26.5 5.1 39 9-47 7-50 (216)
338 3dkr_A Esterase D; alpha beta 21.9 75 0.0026 27.0 4.1 35 11-45 22-56 (251)
339 4fu0_A D-alanine--D-alanine li 21.9 61 0.0021 30.7 3.6 39 8-46 1-43 (357)
340 1efv_B Electron transfer flavo 21.9 1.2E+02 0.0042 27.1 5.4 30 123-152 116-151 (255)
341 3d3j_A Enhancer of mRNA-decapp 21.8 81 0.0028 29.2 4.3 34 11-47 133-168 (306)
342 1pzg_A LDH, lactate dehydrogen 21.8 49 0.0017 31.0 2.9 39 5-48 4-43 (331)
343 3n53_A Response regulator rece 21.7 73 0.0025 24.6 3.6 31 123-153 46-85 (140)
344 1d4o_A NADP(H) transhydrogenas 21.6 91 0.0031 25.9 3.9 38 11-48 23-63 (184)
345 1gsa_A Glutathione synthetase; 21.6 68 0.0023 29.2 3.9 38 11-48 2-42 (316)
346 4h1h_A LMO1638 protein; MCCF-l 21.6 1.4E+02 0.0048 27.8 6.0 71 316-405 63-135 (327)
347 3sbx_A Putative uncharacterize 21.6 99 0.0034 26.3 4.5 37 10-47 13-53 (189)
348 2zyd_A 6-phosphogluconate dehy 21.5 44 0.0015 33.3 2.6 38 5-47 10-47 (480)
349 3dfz_A SIRC, precorrin-2 dehyd 21.5 4E+02 0.014 23.1 12.1 150 295-470 26-185 (223)
350 4g65_A TRK system potassium up 21.4 31 0.0011 34.2 1.5 35 9-48 2-36 (461)
351 1byi_A Dethiobiotin synthase; 21.4 1.2E+02 0.0042 25.9 5.3 43 104-153 96-147 (224)
352 4gi5_A Quinone reductase; prot 21.3 1.4E+02 0.0048 27.1 5.7 38 8-45 20-60 (280)
353 3u7q_A Nitrogenase molybdenum- 21.2 85 0.0029 31.3 4.6 25 123-150 417-441 (492)
354 4e5v_A Putative THUA-like prot 21.2 1.1E+02 0.0036 28.0 4.9 39 8-47 2-43 (281)
355 3rg8_A Phosphoribosylaminoimid 21.2 3.4E+02 0.012 22.2 9.0 138 303-470 3-148 (159)
356 3r5x_A D-alanine--D-alanine li 21.2 79 0.0027 28.8 4.2 46 10-55 3-52 (307)
357 3trh_A Phosphoribosylaminoimid 21.2 1.5E+02 0.0051 24.6 5.2 32 8-40 4-35 (169)
358 3of5_A Dethiobiotin synthetase 21.1 1.2E+02 0.0039 26.6 5.0 32 123-154 110-150 (228)
359 3eme_A Rhodanese-like domain p 21.1 1.3E+02 0.0045 22.0 4.8 35 8-46 54-88 (103)
360 1vmd_A MGS, methylglyoxal synt 21.1 1.5E+02 0.0052 24.8 5.4 97 9-150 26-135 (178)
361 3guy_A Short-chain dehydrogena 21.1 69 0.0023 27.8 3.6 34 11-47 1-34 (230)
362 1iow_A DD-ligase, DDLB, D-ALA\ 21.0 1.3E+02 0.0044 27.2 5.7 39 10-48 2-44 (306)
363 2d1p_A TUSD, hypothetical UPF0 21.0 1.6E+02 0.0054 23.5 5.4 42 11-52 13-58 (140)
364 3qvo_A NMRA family protein; st 21.0 90 0.0031 27.1 4.4 35 11-48 23-58 (236)
365 1ys7_A Transcriptional regulat 21.0 1.2E+02 0.0042 25.9 5.3 30 123-152 51-87 (233)
366 2wtm_A EST1E; hydrolase; 1.60A 21.0 1.2E+02 0.0043 26.1 5.4 36 11-46 27-64 (251)
367 3l4b_C TRKA K+ channel protien 21.0 38 0.0013 29.3 1.8 33 11-48 1-33 (218)
368 4edh_A DTMP kinase, thymidylat 20.9 3.9E+02 0.013 22.8 9.4 39 8-46 4-42 (213)
369 3o1l_A Formyltetrahydrofolate 20.9 3.9E+02 0.013 24.5 8.7 104 319-448 169-274 (302)
370 1fjh_A 3alpha-hydroxysteroid d 20.8 95 0.0033 27.3 4.6 32 12-46 2-33 (257)
371 3to5_A CHEY homolog; alpha(5)b 20.8 1.1E+02 0.0039 24.0 4.5 47 397-450 86-132 (134)
372 4ibo_A Gluconate dehydrogenase 20.8 96 0.0033 27.8 4.6 33 11-46 26-58 (271)
373 4f0j_A Probable hydrolytic enz 20.5 89 0.003 27.7 4.4 36 12-47 47-82 (315)
374 3kkj_A Amine oxidase, flavin-c 20.5 50 0.0017 28.8 2.6 19 27-45 14-32 (336)
375 2vrn_A Protease I, DR1199; cys 20.5 2.1E+02 0.0072 23.7 6.5 40 8-48 7-46 (190)
376 3ksu_A 3-oxoacyl-acyl carrier 20.5 1.1E+02 0.0037 27.3 4.8 33 11-46 11-43 (262)
377 3d3k_A Enhancer of mRNA-decapp 20.5 89 0.0031 28.1 4.2 33 11-46 86-120 (259)
378 2jk1_A HUPR, hydrogenase trans 20.4 1.8E+02 0.0062 22.1 5.8 49 397-451 71-119 (139)
379 3sr3_A Microcin immunity prote 20.3 1.6E+02 0.0053 27.6 6.0 72 316-406 64-137 (336)
380 3qha_A Putative oxidoreductase 20.3 63 0.0022 29.6 3.3 33 10-47 15-47 (296)
381 2o8n_A APOA-I binding protein; 20.3 94 0.0032 28.1 4.3 34 11-47 80-115 (265)
382 3n0v_A Formyltetrahydrofolate 20.2 3.1E+02 0.011 24.9 7.8 102 322-449 157-260 (286)
383 3i12_A D-alanine-D-alanine lig 20.1 70 0.0024 30.3 3.6 39 9-47 2-44 (364)
384 2z1m_A GDP-D-mannose dehydrata 20.1 1.1E+02 0.0036 28.3 4.9 34 10-47 3-36 (345)
385 4eso_A Putative oxidoreductase 20.0 1.2E+02 0.0041 26.8 5.0 33 12-47 9-41 (255)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.9e-69 Score=547.53 Aligned_cols=440 Identities=28% Similarity=0.479 Sum_probs=356.8
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCC--CEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS 85 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 85 (500)
.++.||+++|+|++||++|++.||+.|+++| |.|||++++.+..++.+... ...++++|..+|++++.+.+.
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipdglp~~~~~-- 84 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHDGLPKGYVS-- 84 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCCCCCTTCCC--
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCCCCCCCccc--
Confidence 4578999999999999999999999999999 99999999876666544311 113579999999999877322
Q ss_pred ccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhhhh
Q 010825 86 TTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFR 165 (500)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 165 (500)
..+....+..+.+.+ ...++++++++..+ .++++||||+|.+++|+..+|+++|||++.|++++++.++.+.+.+
T Consensus 85 -~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~---~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 85 -SGNPREPIFLFIKAM-QENFKHVIDEAVAE---TGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp -CSCTTHHHHHHHHHH-HHHHHHHHHHHHHH---HCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred -cCChHHHHHHHHHHH-HHHHHHHHHHHHhh---cCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 223233344444444 44455555443210 0248999999999999999999999999999999999888776655
Q ss_pred hhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhHH
Q 010825 166 TFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQQ 245 (500)
Q Consensus 166 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 245 (500)
......... ....+....++|+++.+..++++.++.. ...+.+.+.+.+..+...+++++++||+++||++
T Consensus 160 ~~~~~~~~~--------~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~ 230 (454)
T 3hbf_A 160 LIREKTGSK--------EVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPL 230 (454)
T ss_dssp HHHHTCCHH--------HHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred HHHhhcCCC--------ccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHH
Confidence 433210000 0011234556899988889999887654 3445567777778888889999999999999999
Q ss_pred HHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHHHHH
Q 010825 246 VLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVAM 325 (500)
Q Consensus 246 ~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~~ 325 (500)
+++.+++..| ++++|||++..... .....++++.+||+.++++++|||||||+...+.+++.+++.
T Consensus 231 ~~~~~~~~~~-~v~~vGPl~~~~~~-------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~ 296 (454)
T 3hbf_A 231 IENELNSKFK-LLLNVGPFNLTTPQ-------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAE 296 (454)
T ss_dssp HHHHHHTTSS-CEEECCCHHHHSCC-------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHH
T ss_pred HHHHHHhcCC-CEEEECCccccccc-------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHH
Confidence 9999999988 99999999864321 111234569999999888899999999999888999999999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeCC
Q 010825 326 GLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWP 405 (500)
Q Consensus 326 al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P 405 (500)
+++..+.+|||+++.+... .+|++|.++.++|+++++|+||.+||+|+++++|||||||||++|++++|||||++|
T Consensus 297 ~l~~~~~~flw~~~~~~~~----~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P 372 (454)
T 3hbf_A 297 SLEECGFPFIWSFRGDPKE----KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRP 372 (454)
T ss_dssp HHHHHCCCEEEECCSCHHH----HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHhCCCeEEEEeCCcchh----cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCc
Confidence 9999999999999865322 278889888999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHH
Q 010825 406 FLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEK 484 (500)
Q Consensus 406 ~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 484 (500)
+++||+.||+++++.+|+|+.+ + +.+++++|.++|+++|+|++|+.||+||++|+++++++.++||||.+++++
T Consensus 373 ~~~DQ~~Na~~v~~~~g~Gv~l-----~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 447 (454)
T 3hbf_A 373 FFGDQGLNTILTESVLEIGVGV-----DNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTT 447 (454)
T ss_dssp CSTTHHHHHHHHHTTSCSEEEC-----GGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred ccccHHHHHHHHHHhhCeeEEe-----cCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 9999999999995336999999 6 589999999999999998767779999999999999999999999999999
Q ss_pred HHHHHH
Q 010825 485 LVNQVL 490 (500)
Q Consensus 485 l~~~~~ 490 (500)
|++++.
T Consensus 448 ~v~~i~ 453 (454)
T 3hbf_A 448 LIQIVT 453 (454)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.9e-67 Score=539.82 Aligned_cols=471 Identities=50% Similarity=0.959 Sum_probs=357.4
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCC-CCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSD-ESST 86 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~-~~~~ 86 (500)
++++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..........++++|..+|++++.. + ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~-~~~~~~ 84 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPM-EGDGDV 84 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCc-ccccCc
Confidence 4467999999999999999999999999999999999998877666543110000112479999999877652 1 0122
Q ss_pred cccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhhhhh
Q 010825 87 TQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFRT 166 (500)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 166 (500)
..++..++..+...+ .+.++++++.+... .++.+||+||+|.+++|+..+|+++|||+|.++++++.......+.+.
T Consensus 85 ~~~~~~~~~~~~~~~-~~~l~~ll~~l~~~--~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNF-LKPYCELLTRLNHS--TNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp -CCHHHHHHHHTTSS-HHHHHHHHHHHHTC--SSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred chhHHHHHHHHHHHh-hHHHHHHHHHHhhh--ccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 235555666655677 88899999887521 001389999999999999999999999999999999887766556666
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhHHH
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQQV 246 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 246 (500)
+...++.|.....+..........+++|++..+...+++.+.......+.+.+.+....+...+++++++||+++||+++
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 66667777654332211112233445666655556666655543333344555556667777889999999999999999
Q ss_pred HHHHhhhCCCcceecCCchhh-hhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHHHHH
Q 010825 247 LNALSFIFPLQLFTIGPLQLL-LNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVAM 325 (500)
Q Consensus 247 ~~~~~~~~p~~~~~vGpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~~ 325 (500)
++.+++.++ ++++|||++.. +.....+ .........|..+.++.+||+.++++++|||||||+.....+++.+++.
T Consensus 242 ~~~~~~~~~-~v~~VGPl~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 318 (482)
T 2pq6_A 242 INALSSTIP-SIYPIGPLPSLLKQTPQIH--QLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAW 318 (482)
T ss_dssp HHHHHTTCT-TEEECCCHHHHHHTSTTGG--GGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHH
T ss_pred HHHHHHhCC-cEEEEcCCccccccccccc--ccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHH
Confidence 999999887 99999999864 2110000 0000001223345568999998877899999999998888888999999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeCC
Q 010825 326 GLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWP 405 (500)
Q Consensus 326 al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P 405 (500)
+++..+.+|||+++.+...+....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|
T Consensus 319 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 319 GLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 99999999999998643222222268888888899999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q 010825 406 FLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKL 485 (500)
Q Consensus 406 ~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 485 (500)
+++||+.||+++++++|+|+.+ +..+++++|.++|+++|+|++++.||+||+++++++++|.++|||+..++++|
T Consensus 399 ~~~dQ~~na~~~~~~~G~g~~l-----~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 473 (482)
T 2pq6_A 399 FFADQPTDCRFICNEWEIGMEI-----DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV 473 (482)
T ss_dssp CSTTHHHHHHHHHHTSCCEEEC-----CSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhCEEEEE-----CCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 9999999999995479999999 66799999999999999988666799999999999999999999999999999
Q ss_pred HHHHH
Q 010825 486 VNQVL 490 (500)
Q Consensus 486 ~~~~~ 490 (500)
++++.
T Consensus 474 v~~~~ 478 (482)
T 2pq6_A 474 IKDVL 478 (482)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99874
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.3e-62 Score=500.75 Aligned_cols=443 Identities=26% Similarity=0.487 Sum_probs=332.3
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCE--EEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFH--ITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS 85 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~--Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 85 (500)
.+++||+++|+|++||++|++.||++|++|||+ ||+++++.+...+.+.... ...++++|..++++++...+
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~---~~~~~i~~~~i~~glp~~~~--- 78 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH---TMQCNIKSYDISDGVPEGYV--- 78 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTTCC---
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc---cCCCceEEEeCCCCCCCccc---
Confidence 346799999999999999999999999999755 5778886555444332110 01247999999988876521
Q ss_pred ccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhhhh
Q 010825 86 TTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFR 165 (500)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 165 (500)
...+....+..+.+.+ ...++++++++... .+.+||+||+|.++.|+..+|+++|||+|.+++++++.+....+.+
T Consensus 79 ~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~---~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAA-PESFRQGMVMAVAE---TGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp CCCCTTHHHHHHHHHH-HHHHHHHHHHHHHH---HTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccCChHHHHHHHHHHh-HHHHHHHHHHHHhc---cCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 1112223333333443 44455555443210 0138999999999999999999999999999999887665443332
Q ss_pred hhhh-cCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhH
Q 010825 166 TFKE-KGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQ 244 (500)
Q Consensus 166 ~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 244 (500)
.... .++.+... .......++|++..++.++++..+........+.+.+.+..+..++++++++||+++||+
T Consensus 155 ~~~~~~~~~~~~~-------~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~ 227 (456)
T 2c1x_A 155 EIREKIGVSGIQG-------REDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDD 227 (456)
T ss_dssp HHHHHHCSSCCTT-------CTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred HHHhccCCccccc-------ccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhH
Confidence 2111 12211100 011233346777666666666543322223344455555566667899999999999999
Q ss_pred HHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHHHH
Q 010825 245 QVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVA 324 (500)
Q Consensus 245 ~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~ 324 (500)
++++.+++..| ++++|||++..... . .+..+.++.+|++..+++++|||||||......+++.+++
T Consensus 228 ~~~~~~~~~~~-~~~~vGpl~~~~~~---------~----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 293 (456)
T 2c1x_A 228 SLTNDLKSKLK-TYLNIGPFNLITPP---------P----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALS 293 (456)
T ss_dssp HHHHHHHHHSS-CEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHH
T ss_pred HHHHHHHhcCC-CEEEecCcccCccc---------c----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHH
Confidence 99999999888 99999999854321 0 0112345889999887789999999999887888999999
Q ss_pred HHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeC
Q 010825 325 MGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICW 404 (500)
Q Consensus 325 ~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~ 404 (500)
.+++..+.+|||+++.+... .+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++
T Consensus 294 ~~l~~~~~~~lw~~~~~~~~----~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 294 EALEASRVPFIWSLRDKARV----HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp HHHHHHTCCEEEECCGGGGG----GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHhcCCeEEEEECCcchh----hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEec
Confidence 99999999999999765322 26788888888999999999999999999999999999999999999999999999
Q ss_pred CcccchhhhHHHhhhhh-cceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHH
Q 010825 405 PFLGDQPTNCRYTCNEW-GVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNL 482 (500)
Q Consensus 405 P~~~DQ~~na~~~~~~~-G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 482 (500)
|++.||+.||++++ +. |+|+.+ + ..+++++|.++|+++|+|++++.||+||+++++.++++..+||||..++
T Consensus 370 P~~~dQ~~Na~~l~-~~~g~g~~l-----~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l 443 (456)
T 2c1x_A 370 PFFGDQRLNGRMVE-DVLEIGVRI-----EGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENF 443 (456)
T ss_dssp CCSTTHHHHHHHHH-HTSCCEEEC-----GGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred CChhhHHHHHHHHH-HHhCeEEEe-----cCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHH
Confidence 99999999999995 55 999999 6 6799999999999999987666799999999999999999999999999
Q ss_pred HHHHHHHHh
Q 010825 483 EKLVNQVLL 491 (500)
Q Consensus 483 ~~l~~~~~~ 491 (500)
++|++++..
T Consensus 444 ~~~v~~~~~ 452 (456)
T 2c1x_A 444 ITLVDLVSK 452 (456)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHHh
Confidence 999999854
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=8.4e-61 Score=492.32 Aligned_cols=445 Identities=29% Similarity=0.457 Sum_probs=328.1
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhC-CCEEEEEeCCc--chhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHK-GFHITFVNTEF--NHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS 85 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 85 (500)
+++||+++|+|++||++|++.||++|++| ||+|||++++. +...+.+... ...++++|..+|+..... ..
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~~~~~---~~ 77 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPVDLTD---LS 77 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTT---SC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCCCCCC---CC
Confidence 45899999999999999999999999998 99999999877 3444443210 002379999998653221 11
Q ss_pred ccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCe-eEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhhh
Q 010825 86 TTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAV-SCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQF 164 (500)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 164 (500)
...++...+......+ .+.++++++++.. +.++ |+||+|.++.|+..+|+++|||++.+++++++.+....+.
T Consensus 78 ~~~~~~~~~~~~~~~~-~~~l~~ll~~~~~-----~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 151 (480)
T 2vch_A 78 SSTRIESRISLTVTRS-NPELRKVFDSFVE-----GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHL 151 (480)
T ss_dssp TTCCHHHHHHHHHHTT-HHHHHHHHHHHHH-----TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhh-hHHHHHHHHHhcc-----CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHH
Confidence 1123333333334555 6778888887631 1278 9999999988999999999999999999988776655544
Q ss_pred hhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhH
Q 010825 165 RTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQ 244 (500)
Q Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 244 (500)
+........+... .... ...|++..+...+++..+.... ......+....+..+++..+++||+.++|+
T Consensus 152 ~~~~~~~~~~~~~--------~~~~-~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~ 220 (480)
T 2vch_A 152 PKLDETVSCEFRE--------LTEP-LMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEP 220 (480)
T ss_dssp HHHHHHCCSCGGG--------CSSC-BCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSH
T ss_pred HHHHhcCCCcccc--------cCCc-ccCCCCCCCChHHCchhhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhH
Confidence 4322111111100 0001 1245554444455554432211 123333444455566788899999999999
Q ss_pred HHHHHHhh---hCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHH
Q 010825 245 QVLNALSF---IFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLI 321 (500)
Q Consensus 245 ~~~~~~~~---~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~ 321 (500)
+.+..+.. .++ ++++|||++..... . ..+..+.++.+||+.++++++|||||||+...+.+++.
T Consensus 221 ~~~~~l~~~~~~~~-~v~~vGpl~~~~~~---------~---~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~ 287 (480)
T 2vch_A 221 NAIKALQEPGLDKP-PVYPVGPLVNIGKQ---------E---AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLN 287 (480)
T ss_dssp HHHHHHHSCCTTCC-CEEECCCCCCCSCS---------C---C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHH
T ss_pred HHHHHHHhcccCCC-cEEEEecccccccc---------c---cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHH
Confidence 88887653 246 89999999753210 0 00124567999999987789999999999888899999
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCCC-----------C-CCCCchHHHHHhhcCceeee-ccchhHhhccCCcceeEeecCc
Q 010825 322 EVAMGLVNSNHPFLWIIRPDLVTG-----------E-TADLPAEFEVKAKEKGFIAS-WCPQEEVLNHPAIGGFFTHSGW 388 (500)
Q Consensus 322 ~l~~al~~~~~~~v~~~~~~~~~~-----------~-~~~~~~~~~~~~~~nv~~~~-~~pq~~lL~~~~~~~~I~HgG~ 388 (500)
+++.+++..+.+|||+++.....+ . ...+|++|.++..++.+++. |+||.+||+|+++++|||||||
T Consensus 288 ~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~ 367 (480)
T 2vch_A 288 ELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGW 367 (480)
T ss_dssp HHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCH
T ss_pred HHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccc
Confidence 999999999999999998653211 1 12378888888777766665 9999999999999999999999
Q ss_pred hhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Q 010825 389 NSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFA 468 (500)
Q Consensus 389 ~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 468 (500)
||++||+++|||||++|+++||+.||+++++++|+|+.+ ...++..+++++|+++|+++|+++.++.||+||+++++++
T Consensus 368 ~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l-~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~ 446 (480)
T 2vch_A 368 NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP-RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAA 446 (480)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC-CCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEe-ecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999975689999999 1111127999999999999998655556999999999999
Q ss_pred HHHhCCCCChHHHHHHHHHHHHh
Q 010825 469 EEATAPDGSSATNLEKLVNQVLL 491 (500)
Q Consensus 469 ~~~~~~~g~~~~~~~~l~~~~~~ 491 (500)
+++..+||++..++++|++++..
T Consensus 447 ~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 447 CRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999865
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.2e-58 Score=472.56 Aligned_cols=438 Identities=26% Similarity=0.428 Sum_probs=326.6
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcch-----hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNH-----RRFLKSRGEHSLGGLPSFRFEAIPDGLPASS 81 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~ 81 (500)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+. +.+.+... ..++++|..+|++..+.
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~-----~~~~i~~~~lp~~~~~~- 81 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA-----SQPQIQLIDLPEVEPPP- 81 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC-----SCTTEEEEECCCCCCCC-
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc-----CCCCceEEECCCCCCCc-
Confidence 46899999999999999999999999999 9999999987652 22322110 12479999998763112
Q ss_pred CCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHH
Q 010825 82 DESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGF 161 (500)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 161 (500)
.+...+....+......+ .+.++++++++.. .+||+||+|.++.|+..+|+++|||++.++++++..+...
T Consensus 82 --~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~~~------~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 152 (463)
T 2acv_A 82 --QELLKSPEFYILTFLESL-IPHVKATIKTILS------NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLM 152 (463)
T ss_dssp --GGGGGSHHHHHHHHHHHT-HHHHHHHHHHHCC------TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHH
T ss_pred --ccccCCccHHHHHHHHhh-hHHHHHHHHhccC------CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHH
Confidence 111111111133334555 6788888887622 3899999999989999999999999999999988776655
Q ss_pred hhhhhhhhcCCCCCCCccchhhhhcccccccCCCC-CCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChH
Q 010825 162 KQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGM-KDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFD 240 (500)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~ 240 (500)
.+.+..... .+..... .......+|++ ..+...+++..+... . .....+....+..+.++.+++||++
T Consensus 153 ~~~~~~~~~--~~~~~~~------~~~~~~~~pg~~~~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~nt~~ 221 (463)
T 2acv_A 153 LSLKNRQIE--EVFDDSD------RDHQLLNIPGISNQVPSNVLPDACFNK--D-GGYIAYYKLAERFRDTKGIIVNTFS 221 (463)
T ss_dssp HHGGGSCTT--CCCCCSS------GGGCEECCTTCSSCEEGGGSCHHHHCT--T-THHHHHHHHHHHHTTSSEEEESCCH
T ss_pred HHHHhhccc--CCCCCcc------ccCceeECCCCCCCCChHHCchhhcCC--c-hHHHHHHHHHHhcccCCEEEECCHH
Confidence 444432100 0110000 00001235665 444445555433322 1 1333334445556788899999999
Q ss_pred HhhHHHHHHHhhh---CCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecccc-ccC
Q 010825 241 ALEQQVLNALSFI---FPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSII-IMN 316 (500)
Q Consensus 241 ~le~~~~~~~~~~---~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~-~~~ 316 (500)
+||++..+.++.. .+ ++++|||++...... .. ...+..+.++.+||+.++++++|||||||+. ..+
T Consensus 222 ele~~~~~~l~~~~~p~~-~v~~vGpl~~~~~~~--------~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~ 291 (463)
T 2acv_A 222 DLEQSSIDALYDHDEKIP-PIYAVGPLLDLKGQP--------NP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG 291 (463)
T ss_dssp HHHHHHHHHHHHHCTTSC-CEEECCCCCCSSCCC--------BT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCC
T ss_pred HHhHHHHHHHHhccccCC-cEEEeCCCccccccc--------cc-ccccccchhHHHHHhcCCCCceEEEEeccccccCC
Confidence 9999988876653 45 899999997532100 00 0002345679999999878899999999998 888
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHh--hcCceeeeccchhHhhccCCcceeEeecCchhHHHH
Q 010825 317 KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIES 394 (500)
Q Consensus 317 ~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ea 394 (500)
.+++.+++.+++..+.+|||+++.+. ..+|++|.++. ++|+++++|+||.++|+|+++++||||||+||++||
T Consensus 292 ~~~~~~~~~~l~~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Ea 366 (463)
T 2acv_A 292 PSQIREIALGLKHSGVRFLWSNSAEK-----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILES 366 (463)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCCG-----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEEECCCc-----ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHH
Confidence 88899999999999999999998640 11677887777 889999999999999999999999999999999999
Q ss_pred HhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCC--CcCHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHHHHH
Q 010825 395 LCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDN--RVSRNEVEKQVRELMG-GEKGKQMRNKASKWKRFAEEA 471 (500)
Q Consensus 395 l~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~--~~~~~~l~~~i~~vl~-~~~~~~~~~~a~~l~~~~~~~ 471 (500)
+++|||+|++|+++||+.||+++++++|+|+.+..+.++. .+++++|.++|+++|+ +++ ||+||+++++.++++
T Consensus 367 l~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a 443 (463)
T 2acv_A 367 MWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNA 443 (463)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHH
T ss_pred HHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHH
Confidence 9999999999999999999999546899999982011123 6899999999999997 456 999999999999999
Q ss_pred hCCCCChHHHHHHHHHHHH
Q 010825 472 TAPDGSSATNLEKLVNQVL 490 (500)
Q Consensus 472 ~~~~g~~~~~~~~l~~~~~ 490 (500)
.++||++..++++|++++.
T Consensus 444 ~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 444 VVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSTTSHHHHHHHHHHHHHH
T ss_pred HhcCCcHHHHHHHHHHHhc
Confidence 9999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-44 Score=368.45 Aligned_cols=398 Identities=15% Similarity=0.149 Sum_probs=270.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC-CCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE-SST 86 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~-~~~ 86 (500)
++.+||++++.+++||++|++.||++|+++||+|+|++++.+.+.+.+. +++|..++..++..... ...
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCCCSCCTTCTTCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCccccccccchhhc
Confidence 4568999999999999999999999999999999999999888877775 78888888765433101 001
Q ss_pred cccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhhhhh
Q 010825 87 TQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFRT 166 (500)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 166 (500)
..+....+..+...+ ...+.++.+.+... +||+||+|.+..|+..+|+++|||++.+++.+..... +.....
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~ 151 (424)
T 2iya_A 80 PEDQESAMGLFLDEA-VRVLPQLEDAYADD------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVP 151 (424)
T ss_dssp CSSHHHHHHHHHHHH-HHHHHHHHHHTTTS------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSG
T ss_pred chhHHHHHHHHHHHH-HHHHHHHHHHHhcc------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-cccccc
Confidence 223333344444433 34445555555444 9999999998889999999999999999877542111 000000
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHH----------hccccCcEEEE
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEAT----------ENASKASAIII 236 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~ 236 (500)
.....+.. ..+ . ...+...... ....... .....+.+.+.... .....++.+++
T Consensus 152 ~~~~~~~~---~~~--------~-~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 215 (424)
T 2iya_A 152 AVQDPTAD---RGE--------E-AAAPAGTGDA-EEGAEAE---DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIV 215 (424)
T ss_dssp GGSCCCC----------------------------------H---HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEE
T ss_pred cccccccc---ccc--------c-cccccccccc-hhhhccc---hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEE
Confidence 00000000 000 0 0000000000 0000000 00000111111111 11125678999
Q ss_pred cChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccC
Q 010825 237 HTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMN 316 (500)
Q Consensus 237 ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~ 316 (500)
+++++++++ ...++.++++|||+..... +..+|++..+++++|||++||.....
T Consensus 216 ~~~~~l~~~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~ 269 (424)
T 2iya_A 216 ALPRTFQIK-----GDTVGDNYTFVGPTYGDRS---------------------HQGTWEGPGDGRPVLLIALGSAFTDH 269 (424)
T ss_dssp SSCTTTSTT-----GGGCCTTEEECCCCCCCCG---------------------GGCCCCCCCSSCCEEEEECCSSSCCC
T ss_pred EcchhhCCC-----ccCCCCCEEEeCCCCCCcc---------------------cCCCCCccCCCCCEEEEEcCCCCcch
Confidence 999988876 3444448999999753211 12357776556789999999998666
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHh
Q 010825 317 KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLC 396 (500)
Q Consensus 317 ~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~ 396 (500)
.+.+..++++++..+.+++|.++.+.... .+ +..++|+.+.+|+||.++|+++++ ||||||+||++||++
T Consensus 270 ~~~~~~~~~al~~~~~~~~~~~g~~~~~~-------~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~ 339 (424)
T 2iya_A 270 LDFYRTCLSAVDGLDWHVVLSVGRFVDPA-------DL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALS 339 (424)
T ss_dssp HHHHHHHHHHHTTCSSEEEEECCTTSCGG-------GG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCcCChH-------Hh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHH
Confidence 78888999999888889999887543111 11 123669999999999999999998 999999999999999
Q ss_pred cCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCC
Q 010825 397 AGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPD 475 (500)
Q Consensus 397 ~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~ 475 (500)
+|+|+|++|.+.||+.||+++ +++|+|+.+ + ..+++++|.++|.++|+|++ ++++++++++.+++ .
T Consensus 340 ~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~---~- 406 (424)
T 2iya_A 340 NAVPMVAVPQIAEQTMNAERI-VELGLGRHI-----PRDQVTAEKLREAVLAVASDPG---VAERLAAVRQEIRE---A- 406 (424)
T ss_dssp TTCCEEECCCSHHHHHHHHHH-HHTTSEEEC-----CGGGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT---S-
T ss_pred cCCCEEEecCccchHHHHHHH-HHCCCEEEc-----CcCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh---c-
Confidence 999999999999999999999 689999999 7 57899999999999999987 99999999999985 2
Q ss_pred CChHHHHHHHHHH
Q 010825 476 GSSATNLEKLVNQ 488 (500)
Q Consensus 476 g~~~~~~~~l~~~ 488 (500)
+.....++.+.+.
T Consensus 407 ~~~~~~~~~i~~~ 419 (424)
T 2iya_A 407 GGARAAADILEGI 419 (424)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 4444544444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=5e-43 Score=353.80 Aligned_cols=349 Identities=17% Similarity=0.151 Sum_probs=222.9
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCC-------C
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPA-------S 80 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~-------~ 80 (500)
.+.|||+|+++|+.||++|+++||++|++|||+|||++++.+...... ++.+..+...... .
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~ 88 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA-----------GLCAVDVSPGVNYAKLFVPDD 88 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT-----------TCEEEESSTTCCSHHHHSCCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc-----------CCeeEecCCchhHhhhccccc
Confidence 467999999999999999999999999999999999999887765433 5666666432210 0
Q ss_pred CCCC----CccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchh
Q 010825 81 SDES----STTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISAC 156 (500)
Q Consensus 81 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 156 (500)
.... ............+.... ...+.++++.+... +||+||+|.+.+++..+|+.+|||++.+...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 89 TDVTDPMHSEGLGEGFFAEMFARVS-AVAVDGALRTARSW------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp ------------CHHHHHHHHHHHH-HHHHHHHHHHHHHH------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred cccccccchhhhhHHHHHHHHHHHH-HHHHHHHHHHHHhc------CCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 0000 00111111122222222 23334444444333 9999999999999999999999999987655332
Q ss_pred HHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhc-cccCcEEE
Q 010825 157 SFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATEN-ASKASAII 235 (500)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 235 (500)
........... .......+..-. .......+
T Consensus 162 ~~~~~~~~~~~------------------------------------------------~l~~~~~~~~~~~~~~~~~~~ 193 (400)
T 4amg_A 162 SEPGLGALIRR------------------------------------------------AMSKDYERHGVTGEPTGSVRL 193 (400)
T ss_dssp CCHHHHHHHHH------------------------------------------------HTHHHHHHTTCCCCCSCEEEE
T ss_pred cccchhhHHHH------------------------------------------------HHHHHHHHhCCCcccccchhh
Confidence 21111000000 000000000000 01111112
Q ss_pred EcChHHhhHHHHHHHhh-hCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccc
Q 010825 236 IHTFDALEQQVLNALSF-IFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIII 314 (500)
Q Consensus 236 ~ns~~~le~~~~~~~~~-~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~ 314 (500)
......+... .+.. ..+ ..+.+.+.... ....+.+|++..+++++|||||||+..
T Consensus 194 ~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 249 (400)
T 4amg_A 194 TTTPPSVEAL---LPEDRRSP-GAWPMRYVPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDA 249 (400)
T ss_dssp ECCCHHHHHT---SCGGGCCT-TCEECCCCCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC-
T ss_pred cccCchhhcc---CcccccCC-cccCccccccc--------------------ccccCcccccccCCCcEEEEeCCcccc
Confidence 2221110000 0000 011 22222222110 111244688888888999999999864
Q ss_pred cC--HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHH
Q 010825 315 MN--KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTI 392 (500)
Q Consensus 315 ~~--~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ 392 (500)
.. .+.+..++.+++..+.++||..+....... ...++|+++.+|+||.++|+|+++ ||||||+||++
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~---------~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~ 318 (400)
T 4amg_A 250 LSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALL---------GELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLL 318 (400)
T ss_dssp -CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCC---------CCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHH
T ss_pred cCccHHHHHHHHHHhhccCceEEEEecCcccccc---------ccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHH
Confidence 33 356788899999999999999876543221 113679999999999999999998 99999999999
Q ss_pred HHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHH
Q 010825 393 ESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEE 470 (500)
Q Consensus 393 eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 470 (500)
||+++|||+|++|++.||+.||+++ +++|+|+.+ + ...++ ++|+++|+|++ ||++|+++++++++
T Consensus 319 Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l-----~~~~~~~----~al~~lL~d~~---~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 319 TALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDA-----EAGSLGA----EQCRRLLDDAG---LREAALRVRQEMSE 384 (400)
T ss_dssp HHHHHTCCEEECCC---CHHHHHHH-HHHTSEEEC-----CTTTCSH----HHHHHHHHCHH---HHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEc-----CCCCchH----HHHHHHHcCHH---HHHHHHHHHHHHHc
Confidence 9999999999999999999999999 689999999 6 55665 46778899987 99999999999996
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5e-42 Score=348.15 Aligned_cols=382 Identities=13% Similarity=0.103 Sum_probs=254.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccccH
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQDM 90 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 90 (500)
|||++++.++.||++|+++||++|++|||+|+|++++.+.+.+.+. +++|..++........... ...
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~i~~~~~~~~~~~~--~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV----------GVPHVPVGPSARAPIQRAK--PLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEECCC-------CCS--CCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc----------CCeeeeCCCCHHHHhhccc--ccc
Confidence 6899999999999999999999999999999999998877766654 6888888754321100011 111
Q ss_pred HHHH-HHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcC-Ccch--HHHHHHHhCCCeEEEeccchhHHHHHhhhhh
Q 010825 91 YSLC-ESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDG-FLPF--TVTAAQQLGLPIVLLFTISACSFMGFKQFRT 166 (500)
Q Consensus 91 ~~~~-~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 166 (500)
...+ ..+.... ...++++.+. .. +||+||+|. +..| +..+|+++|||+|.+++++.....
T Consensus 69 ~~~~~~~~~~~~-~~~~~~l~~~--~~------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~------- 132 (415)
T 1iir_A 69 AEDVRRFTTEAI-ATQFDEIPAA--AE------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS------- 132 (415)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHH--TT------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-------
T ss_pred hHHHHHHHHHHH-HHHHHHHHHH--hc------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-------
Confidence 1111 1111111 2233444331 23 999999998 5668 899999999999999877543211
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCC-CCCCCcCCCCcccccCCchhhHHHHHHHHH------------hccccCcE
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPG-MKDIRIRDLPSFVRSTDSKDIMFNLCVEAT------------ENASKASA 233 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 233 (500)
.+.|..... +.+.++ ..+. +............+...+.... +..... +
T Consensus 133 ----~~~p~~~~~----------~~~~~~~~~n~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~ 193 (415)
T 1iir_A 133 ----PYYPPPPLG----------EPSTQDTIDIP----AQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-H 193 (415)
T ss_dssp ----SSSCCCC-------------------CHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-S
T ss_pred ----cccCCccCC----------ccccchHHHHH----HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-C
Confidence 111211000 000000 0000 0000000000000000000010 111223 6
Q ss_pred EEEcChHHhhH-HHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccc
Q 010825 234 IIIHTFDALEQ-QVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSI 312 (500)
Q Consensus 234 ~l~ns~~~le~-~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~ 312 (500)
+++|++++|++ + ++.+ ++++|||+..... +..+.++.+|++.. +++|||++||.
T Consensus 194 ~l~~~~~~l~~~~-----~~~~--~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~ 248 (415)
T 1iir_A 194 PWVAADPVLAPLQ-----PTDL--DAVQTGAWILPDE----------------RPLSPELAAFLDAG--PPPVYLGFGSL 248 (415)
T ss_dssp CEECSCTTTSCCC-----CCSS--CCEECCCCCCCCC----------------CCCCHHHHHHHHTS--SCCEEEECC--
T ss_pred EEEeeChhhcCCC-----cccC--CeEeeCCCccCcc----------------cCCCHHHHHHHhhC--CCeEEEeCCCC
Confidence 89999988887 4 3333 6899999874321 12345688999765 37899999999
Q ss_pred cccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHH
Q 010825 313 IIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTI 392 (500)
Q Consensus 313 ~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ 392 (500)
. ...+....++++++..+.+++|+++.+... . ...++|+.+.+|+||.++|+++++ ||||||+||++
T Consensus 249 ~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~ 315 (415)
T 1iir_A 249 G-APADAVRVAIDAIRAHGRRVILSRGWADLV-----L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTH 315 (415)
T ss_dssp --CCHHHHHHHHHHHHHTTCCEEECTTCTTCC-----C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHH
T ss_pred C-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc-----c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHH
Confidence 7 667888889999999999999988754321 0 113568999999999999999888 99999999999
Q ss_pred HHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q 010825 393 ESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEA 471 (500)
Q Consensus 393 eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~ 471 (500)
||+++|+|+|++|++.||+.||+++ +++|+|+.+ + ..+++++|.++|.++ +|++ ++++++++++.++.
T Consensus 316 Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~- 384 (415)
T 1iir_A 316 VAARAGAPQILLPQMADQPYYAGRV-AELGVGVAH-----DGPIPTFDSLSAALATA-LTPE---THARATAVAGTIRT- 384 (415)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC-----SSSSCCHHHHHHHHHHH-TSHH---HHHHHHHHHHHSCS-
T ss_pred HHHHcCCCEEECCCCCccHHHHHHH-HHCCCcccC-----CcCCCCHHHHHHHHHHH-cCHH---HHHHHHHHHHHHhh-
Confidence 9999999999999999999999999 789999999 6 578999999999999 8876 99999999998864
Q ss_pred hCCCCChHHHHHHHHHHHHhc
Q 010825 472 TAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 472 ~~~~g~~~~~~~~l~~~~~~~ 492 (500)
..+...+.+.++++.++
T Consensus 385 ----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 385 ----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp ----CHHHHHHHHHHHHHHTC
T ss_pred ----cChHHHHHHHHHHHHhc
Confidence 22345555566665543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3e-41 Score=342.61 Aligned_cols=382 Identities=11% Similarity=0.059 Sum_probs=256.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccccH
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQDM 90 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 90 (500)
|||++++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|..++....... ........
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~-~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMML-QEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCC-CTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHH-hhccccch
Confidence 6899999999999999999999999999999999998877777765 688888875432110 00000111
Q ss_pred HHHHHHHHHhccchHHHHHHHHhh--cCCCCCCCCeeEEEEcC-Ccch--HHHHHHHhCCCeEEEeccchhHHHHHhhhh
Q 010825 91 YSLCESIMNNVMLHPFLDLLAKLN--DSSNSVNPAVSCIISDG-FLPF--TVTAAQQLGLPIVLLFTISACSFMGFKQFR 165 (500)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~ll~~l~--~~~~~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 165 (500)
...+..+. ...+.++++.+. .. +||+||+|. +.++ +..+|+++|||++.+++++.+...
T Consensus 70 ~~~~~~~~----~~~~~~~~~~l~~~~~------~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~------ 133 (416)
T 1rrv_A 70 PEEEQRLA----AMTVEMQFDAVPGAAE------GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS------ 133 (416)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHTT------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC------
T ss_pred hHHHHHHH----HHHHHHHHHHHHHHhc------CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC------
Confidence 11111111 111223333332 33 899999997 4557 889999999999998766533211
Q ss_pred hhhhcCCCCCCCccchhhhhcccccccCCC-CCCCCcCCCCcccccCCchhhHHHHHHHH------------HhccccCc
Q 010825 166 TFKEKGLFPVDDKSCLTKEYLSRLIDWIPG-MKDIRIRDLPSFVRSTDSKDIMFNLCVEA------------TENASKAS 232 (500)
Q Consensus 166 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 232 (500)
.+.| ... .+.+.++ ..+.....+ ........+...+... .+.....
T Consensus 134 -----~~~p-~~~----------~~~~~~~r~~n~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 192 (416)
T 1rrv_A 134 -----PHLP-PAY----------DEPTTPGVTDIRVLWEE----RAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE- 192 (416)
T ss_dssp -----SSSC-CCB----------CSCCCTTCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-
T ss_pred -----cccC-CCC----------CCCCCchHHHHHHHHHH----HHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-
Confidence 1111 000 0000010 000000000 0000000000000010 1112233
Q ss_pred EEEEcChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccc
Q 010825 233 AIIIHTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSI 312 (500)
Q Consensus 233 ~~l~ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~ 312 (500)
.+++|++++++++ ++.+ ++++|||+..... +..+.++.+|++.. +++|||++||.
T Consensus 193 ~~l~~~~~~l~~~-----~~~~--~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~ 247 (416)
T 1rrv_A 193 RPLLAADPVLAPL-----QPDV--DAVQTGAWLLSDE----------------RPLPPELEAFLAAG--SPPVHIGFGSS 247 (416)
T ss_dssp SCEECSCTTTSCC-----CSSC--CCEECCCCCCCCC----------------CCCCHHHHHHHHSS--SCCEEECCTTC
T ss_pred CeEEccCccccCC-----CCCC--CeeeECCCccCcc----------------CCCCHHHHHHHhcC--CCeEEEecCCC
Confidence 7899999888875 3333 6899999874321 12345688999765 37899999998
Q ss_pred cc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhH
Q 010825 313 II-MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNST 391 (500)
Q Consensus 313 ~~-~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~ 391 (500)
.. ...+.+..++++++..+.++||+++..... . ...++|+.+.+|+||.++|+++++ ||||||+||+
T Consensus 248 ~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~ 315 (416)
T 1rrv_A 248 SGRGIADAAKVAVEAIRAQGRRVILSRGWTELV-----L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTE 315 (416)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-----C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHH
T ss_pred CccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-----c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHH
Confidence 63 456678889999999999999998765321 0 113568999999999999999888 9999999999
Q ss_pred HHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHH
Q 010825 392 IESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEE 470 (500)
Q Consensus 392 ~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 470 (500)
+||+++|+|+|++|++.||+.||+++ ++.|+|+.+ + ..+++++|.++|.++ +|++ |++++++++++++.
T Consensus 316 ~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 316 HVATRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAH-----DGPTPTFESLSAALTTV-LAPE---TRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHTCCEEECCCSBTHHHHHHHH-HHHTSEEEC-----SSSCCCHHHHHHHHHHH-TSHH---HHHHHHHHTTTCCC
T ss_pred HHHHHcCCCEEEccCCCCcHHHHHHH-HHCCCccCC-----CCCCCCHHHHHHHHHHh-hCHH---HHHHHHHHHHHHhh
Confidence 99999999999999999999999999 689999999 6 578999999999999 8887 99999999988874
Q ss_pred HhCCCCChHHHHHHHHHHHHhc
Q 010825 471 ATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 471 ~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
. +.. +.++.+++++.++
T Consensus 386 ---~-~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 386 ---D-GAA-AAADLVLAAVGRE 402 (416)
T ss_dssp ---C-HHH-HHHHHHHHHHHC-
T ss_pred ---c-CcH-HHHHHHHHHHhcc
Confidence 2 333 4444442665543
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.7e-39 Score=329.63 Aligned_cols=381 Identities=12% Similarity=0.122 Sum_probs=263.9
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC---
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS--- 85 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~--- 85 (500)
..+||+|++.++.||++|+++||++|+++||+|++++++.+.+.+.+. ++.|..++..++.. ...
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~--~~~~~~ 86 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA----------GATVVPYQSEIIDA--DAAEVF 86 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCSTTTC--CHHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc----------CCEEEecccccccc--ccchhh
Confidence 348999999999999999999999999999999999998888887775 78898887544432 100
Q ss_pred ccccHHHHHHH-HHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEc-CCcchHHHHHHHhCCCeEEEeccchhHHHHHhh
Q 010825 86 TTQDMYSLCES-IMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISD-GFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQ 163 (500)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 163 (500)
........+.. +.... ...+.++.+.+... +||+||+| ....++..+|+++|||++.+.+....... +..
T Consensus 87 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~ 158 (415)
T 3rsc_A 87 GSDDLGVRPHLMYLREN-VSVLRATAEALDGD------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSF 158 (415)
T ss_dssp HSSSSCHHHHHHHHHHH-HHHHHHHHHHHSSS------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCH
T ss_pred ccccHHHHHHHHHHHHH-HHHHHHHHHHHhcc------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccc
Confidence 00011111222 33333 33445555556554 99999999 77778999999999999998754321100 000
Q ss_pred hhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHH------Hhcccc-CcEEEE
Q 010825 164 FRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEA------TENASK-ASAIII 236 (500)
Q Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~l~ 236 (500)
.+... ..+.+ ..|. ..... ...+.+.+... ...... ++..++
T Consensus 159 ~~~~~-~~~~~-----------------~~p~--------~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~ 207 (415)
T 3rsc_A 159 SQDMV-TLAGT-----------------IDPL--------DLPVF-----RDTLRDLLAEHGLSRSVVDCWNHVEQLNLV 207 (415)
T ss_dssp HHHHH-HHHTC-----------------CCGG--------GCHHH-----HHHHHHHHHHTTCCCCHHHHHTCCCSEEEE
T ss_pred ccccc-ccccc-----------------CChh--------hHHHH-----HHHHHHHHHHcCCCCChhhhhcCCCCeEEE
Confidence 00000 00000 0000 00000 00000111100 011112 266777
Q ss_pred cChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccC
Q 010825 237 HTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMN 316 (500)
Q Consensus 237 ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~ 316 (500)
...+.++++ ...++.++.++||+..... +..+|....+++++|||++||.....
T Consensus 208 ~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~ 261 (415)
T 3rsc_A 208 FVPKAFQIA-----GDTFDDRFVFVGPCFDDRR---------------------FLGEWTRPADDLPVVLVSLGTTFNDR 261 (415)
T ss_dssp SSCTTTSTT-----GGGCCTTEEECCCCCCCCG---------------------GGCCCCCCSSCCCEEEEECTTTSCCC
T ss_pred EcCcccCCC-----cccCCCceEEeCCCCCCcc---------------------cCcCccccCCCCCEEEEECCCCCCCh
Confidence 776666655 6666668999999763221 12346554556789999999997767
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHh
Q 010825 317 KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLC 396 (500)
Q Consensus 317 ~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~ 396 (500)
.+.+..+++++...+.+++|.++.+..... .+..++|+.+.+|+|+.++|+++++ ||||||+||++||++
T Consensus 262 ~~~~~~~~~al~~~~~~~v~~~g~~~~~~~--------l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~ 331 (415)
T 3rsc_A 262 PGFFRDCARAFDGQPWHVVMTLGGQVDPAA--------LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALY 331 (415)
T ss_dssp HHHHHHHHHHHTTSSCEEEEECTTTSCGGG--------GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCCChHH--------hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHH
Confidence 788889999999888899998875422111 1123569999999999999999998 999999999999999
Q ss_pred cCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCC
Q 010825 397 AGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPD 475 (500)
Q Consensus 397 ~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~ 475 (500)
+|+|+|++|...||+.||.++ ++.|+|+.+ . ..+++++|.++|.++++|++ ++++++++++.+.+ .
T Consensus 332 ~G~P~v~~p~~~~q~~~a~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~ 398 (415)
T 3rsc_A 332 WGRPLVVVPQSFDVQPMARRV-DQLGLGAVL-----PGEKADGDTLLAAVGAVAADPA---LLARVEAMRGHVRR----A 398 (415)
T ss_dssp TTCCEEECCCSGGGHHHHHHH-HHHTCEEEC-----CGGGCCHHHHHHHHHHHHTCHH---HHHHHHHHHHHHHH----S
T ss_pred hCCCEEEeCCcchHHHHHHHH-HHcCCEEEc-----ccCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----c
Confidence 999999999999999999999 689999999 7 57899999999999999987 99999999999987 3
Q ss_pred CChHHHHHHHHHHH
Q 010825 476 GSSATNLEKLVNQV 489 (500)
Q Consensus 476 g~~~~~~~~l~~~~ 489 (500)
++.++.++.+.+.+
T Consensus 399 ~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 399 GGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 44455555555444
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.8e-40 Score=332.19 Aligned_cols=376 Identities=13% Similarity=0.122 Sum_probs=249.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCC-CCCcccc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSD-ESSTTQD 89 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~-~~~~~~~ 89 (500)
|||+|++.++.||++|+++||++|.+|||+|++++++.+.+.+++. ++.|..++........ .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~----------g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV----------GVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT----------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCceeecCCCHHHHhccccCCHHH
Confidence 6899999999999999999999999999999999999888888765 7888888643221100 0000111
Q ss_pred HHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchH---HHHHHHhCCCeEEEeccchhHHHHHhhhhh
Q 010825 90 MYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFT---VTAAQQLGLPIVLLFTISACSFMGFKQFRT 166 (500)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 166 (500)
+. ..+.... ...++++.+.+. +||+||+|.....+ ..+|+++|||++.+.+++............
T Consensus 71 ~~---~~~~~~~-~~~~~~l~~~~~--------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~ 138 (404)
T 3h4t_A 71 AA---EVVTEVV-AEWFDKVPAAIE--------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAER 138 (404)
T ss_dssp CG---GGHHHHH-HHHHHHHHHHHT--------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHH
T ss_pred HH---HHHHHHH-HHHHHHHHHHhc--------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHH
Confidence 11 1111222 233334433331 79999999765544 789999999999987776532111000000
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhHHH
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQQV 246 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 246 (500)
.. ........+....+.+- ..+ .+.. ..+.. .. ...+..+++..+.+.+.
T Consensus 139 ~~---------~~~~~~~~~~~~~~~~~--~~l---gl~~------~~~~~--------~~-~~~~~~l~~~~~~l~p~- 188 (404)
T 3h4t_A 139 DM---------YNQGADRLFGDAVNSHR--ASI---GLPP------VEHLY--------DY-GYTDQPWLAADPVLSPL- 188 (404)
T ss_dssp HH---------HHHHHHHHHHHHHHHHH--HHT---TCCC------CCCHH--------HH-HHCSSCEECSCTTTSCC-
T ss_pred HH---------HHHHHHHHhHHHHHHHH--HHc---CCCC------Ccchh--------hc-cccCCeEEeeCcceeCC-
Confidence 00 00000000000000000 000 0000 00000 00 01223455666666554
Q ss_pred HHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHHHHHH
Q 010825 247 LNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVAMG 326 (500)
Q Consensus 247 ~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~~a 326 (500)
+++.+ +++++|++..... ...++++.+|++.. +++||||+||+.. ..+.+..++++
T Consensus 189 ----~~~~~-~~~~~G~~~~~~~----------------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~a 244 (404)
T 3h4t_A 189 ----RPTDL-GTVQTGAWILPDQ----------------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEA 244 (404)
T ss_dssp ----CTTCC-SCCBCCCCCCCCC----------------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHH
T ss_pred ----CCCCC-CeEEeCccccCCC----------------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHH
Confidence 44444 8899998764221 12345688899754 4789999999976 67788899999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeCCc
Q 010825 327 LVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPF 406 (500)
Q Consensus 327 l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~ 406 (500)
++..+.++||+.+...... . ..++|+.+.+|+||.++|+++++ ||||||+||+.|++++|+|+|++|+
T Consensus 245 l~~~~~~vv~~~g~~~~~~----~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~ 312 (404)
T 3h4t_A 245 VRAQGRRVVLSSGWAGLGR----I------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQ 312 (404)
T ss_dssp HHHTTCCEEEECTTTTCCC----S------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHhCCCEEEEEeCCccccc----c------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCC
Confidence 9999999999987643211 1 12569999999999999999998 9999999999999999999999999
Q ss_pred ccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q 010825 407 LGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKL 485 (500)
Q Consensus 407 ~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 485 (500)
..||+.||.++ ++.|+|+.+ + ..++++.|.++|.++++ ++ |+++++++++.+++ ...++.++.+
T Consensus 313 ~~dQ~~na~~~-~~~G~g~~l-----~~~~~~~~~l~~ai~~ll~-~~---~~~~~~~~~~~~~~-----~~~~~~~~~i 377 (404)
T 3h4t_A 313 KADQPYYAGRV-ADLGVGVAH-----DGPTPTVESLSAALATALT-PG---IRARAAAVAGTIRT-----DGTTVAAKLL 377 (404)
T ss_dssp STTHHHHHHHH-HHHTSEEEC-----SSSSCCHHHHHHHHHHHTS-HH---HHHHHHHHHTTCCC-----CHHHHHHHHH
T ss_pred cccHHHHHHHH-HHCCCEecc-----CcCCCCHHHHHHHHHHHhC-HH---HHHHHHHHHHHHhh-----hHHHHHHHHH
Confidence 99999999999 689999999 7 67899999999999998 76 99999999988872 3334444444
Q ss_pred HHHH
Q 010825 486 VNQV 489 (500)
Q Consensus 486 ~~~~ 489 (500)
.+.+
T Consensus 378 ~~~~ 381 (404)
T 3h4t_A 378 LEAI 381 (404)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.4e-38 Score=318.42 Aligned_cols=382 Identities=15% Similarity=0.159 Sum_probs=261.9
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC-CCcccc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE-SSTTQD 89 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~-~~~~~~ 89 (500)
+||++++.++.||++|++.||++|+++||+|++++++.+.+.+.+. ++.|..++..++..... .....+
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA----------GAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT----------TCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc----------CCEEEecccccccccccccccccc
Confidence 4999999999999999999999999999999999998888877765 78888887533322000 011222
Q ss_pred HHHHHHH-HHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEc-CCcchHHHHHHHhCCCeEEEeccchhHHHHHhhhhhh
Q 010825 90 MYSLCES-IMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISD-GFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFRTF 167 (500)
Q Consensus 90 ~~~~~~~-~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 167 (500)
....+.. +.... ...+.++.+.+... +||+||+| .+..++..+|+++|||+|.+.+....... +...+..
T Consensus 75 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 146 (402)
T 3ia7_A 75 AETQLHLVYVREN-VAILRAAEEALGDN------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKEL 146 (402)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHTTC------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHH
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHhcc------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccc
Confidence 3333333 33333 34455666666554 99999999 77778999999999999998654332110 0000000
Q ss_pred hhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHH------HhccccC-cEEEEcChH
Q 010825 168 KEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEA------TENASKA-SAIIIHTFD 240 (500)
Q Consensus 168 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~ns~~ 240 (500)
..... . ..|. ..... .....+.+... ....... +..+....+
T Consensus 147 ~~~~~-~-----------------~~~~--------~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 195 (402)
T 3ia7_A 147 WKSNG-Q-----------------RHPA--------DVEAV-----HSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPK 195 (402)
T ss_dssp HHHHT-C-----------------CCGG--------GSHHH-----HHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCG
T ss_pred ccccc-c-----------------cChh--------hHHHH-----HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCh
Confidence 00000 0 0000 00000 00000000000 0011112 556666655
Q ss_pred HhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHH
Q 010825 241 ALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQL 320 (500)
Q Consensus 241 ~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~ 320 (500)
++++. ...++.++.++||+..... +...|+...+++++||+++||......+.+
T Consensus 196 ~~~~~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~ 249 (402)
T 3ia7_A 196 SFQPF-----AETFDERFAFVGPTLTGRD---------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFF 249 (402)
T ss_dssp GGSTT-----GGGCCTTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHH
T ss_pred HhCCc-----cccCCCCeEEeCCCCCCcc---------------------cCCCCcccCCCCCEEEEECCCCCcchHHHH
Confidence 66554 5565658999999763221 123365545567899999999987677788
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCc
Q 010825 321 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVP 400 (500)
Q Consensus 321 ~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP 400 (500)
..++++++..+.+++|.++.+..... .+..++|+.+.+|+|+.++|+++++ ||||||+||+.||+++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P 319 (402)
T 3ia7_A 250 RACAQAFADTPWHVVMAIGGFLDPAV--------LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVP 319 (402)
T ss_dssp HHHHHHHTTSSCEEEEECCTTSCGGG--------GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCcEEEEEeCCcCChhh--------hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 89999999888888888875422111 1123679999999999999999998 9999999999999999999
Q ss_pred eeeCCc-ccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCCh
Q 010825 401 MICWPF-LGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSS 478 (500)
Q Consensus 401 ~v~~P~-~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 478 (500)
+|++|. ..||+.||.++ ++.|+|+.+ . ..++++.|.++|.++++|++ ++++++++++.+.+ .++.
T Consensus 320 ~v~~p~~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~~----~~~~ 386 (402)
T 3ia7_A 320 LVLVPHFATEAAPSAERV-IELGLGSVL-----RPDQLEPASIREAVERLAADSA---VRERVRRMQRDILS----SGGP 386 (402)
T ss_dssp EEECGGGCGGGHHHHHHH-HHTTSEEEC-----CGGGCSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCHH
T ss_pred EEEeCCCcccHHHHHHHH-HHcCCEEEc-----cCCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHhh----CChH
Confidence 999999 99999999999 689999999 7 57899999999999999987 99999999999885 3555
Q ss_pred HHHHHHHHHHHH
Q 010825 479 ATNLEKLVNQVL 490 (500)
Q Consensus 479 ~~~~~~l~~~~~ 490 (500)
...++.+.+.+.
T Consensus 387 ~~~~~~i~~~~~ 398 (402)
T 3ia7_A 387 ARAADEVEAYLG 398 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555555443
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=7.7e-38 Score=314.15 Aligned_cols=363 Identities=13% Similarity=0.100 Sum_probs=247.6
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCC--------C-
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPAS--------S- 81 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~--------~- 81 (500)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... ++.+..++...... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV----------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC----------CCEEEEeCCcchHHHHhhhcccCc
Confidence 6899999999999999999999999999999999998776666553 67777776432000 0
Q ss_pred CCCCccccHHHHH-HH-HHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHH
Q 010825 82 DESSTTQDMYSLC-ES-IMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFM 159 (500)
Q Consensus 82 ~~~~~~~~~~~~~-~~-~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 159 (500)
+...........+ .. +...+ ...+.++.+.+++. +||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~-- 141 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMA-ASSLPRMLDFSRAW------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA-- 141 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC--
T ss_pred cccCcchHHHHHHHHHHHHhhH-HHHHHHHHHHHhcc------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc--
Confidence 0010100111111 21 11222 22334444444333 99999999887888999999999999875321100
Q ss_pred HHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHH-hccccCcEEEEcC
Q 010825 160 GFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEAT-ENASKASAIIIHT 238 (500)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns 238 (500)
. . + .... .....+...... .....++.+++++
T Consensus 142 --------------~----~----------------~--------~~~~-----~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (384)
T 2p6p_A 142 --------------D----G----------------I--------HPGA-----DAELRPELSELGLERLPAPDLFIDIC 174 (384)
T ss_dssp --------------T----T----------------T--------HHHH-----HHHTHHHHHHTTCSSCCCCSEEEECS
T ss_pred --------------c----h----------------h--------hHHH-----HHHHHHHHHHcCCCCCCCCCeEEEEC
Confidence 0 0 0 0000 000001111000 0011257888999
Q ss_pred hHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecccccc---
Q 010825 239 FDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIM--- 315 (500)
Q Consensus 239 ~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~--- 315 (500)
.+.++++ ++....++.+++. . . +.++.+|++..+++++|||++||....
T Consensus 175 ~~~~~~~-----~~~~~~~~~~~~~-~--~--------------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 226 (384)
T 2p6p_A 175 PPSLRPA-----NAAPARMMRHVAT-S--R--------------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESY 226 (384)
T ss_dssp CGGGSCT-----TSCCCEECCCCCC-C--C--------------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSS
T ss_pred CHHHCCC-----CCCCCCceEecCC-C--C--------------------CCCCCchhhcCCCCCEEEEECCCCCccccc
Confidence 8777654 3221113333321 1 0 112456887645568999999999754
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHH
Q 010825 316 --NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIE 393 (500)
Q Consensus 316 --~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~e 393 (500)
+.+.+..++++++..+.+++|+.+.. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++|
T Consensus 227 ~~~~~~~~~~~~al~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~E 294 (384)
T 2p6p_A 227 DRNFDFLRGLAKDLVRWDVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLT 294 (384)
T ss_dssp CCCCTTHHHHHHHHHTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHH
T ss_pred cccHHHHHHHHHHHhcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHH
Confidence 45678889999998899999987632 11112 235789999 99999999999998 999999999999
Q ss_pred HHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHh
Q 010825 394 SLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEAT 472 (500)
Q Consensus 394 al~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~ 472 (500)
|+++|+|+|++|...||+.||.++ ++.|+|+.+ + ...++++|.++|.++++|++ ++++++++++.++.
T Consensus 295 a~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~-- 363 (384)
T 2p6p_A 295 GLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIAL-----LPGEDSTEAIADSCQELQAKDT---YARRAQDLSREISG-- 363 (384)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEEC-----CTTCCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT--
T ss_pred HHHhCCCEEEccCcccchHHHHHH-HHCCCeEec-----CcCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh--
Confidence 999999999999999999999999 689999999 6 57899999999999999987 99999999999996
Q ss_pred CCCCChHHHHHHHHHHHHhc
Q 010825 473 APDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 473 ~~~g~~~~~~~~l~~~~~~~ 492 (500)
.+..++.++.+.+.+..+
T Consensus 364 --~~~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 364 --MPLPATVVTALEQLAHHH 381 (384)
T ss_dssp --SCCHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHhhhc
Confidence 344456665555555443
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.9e-37 Score=314.69 Aligned_cols=381 Identities=15% Similarity=0.171 Sum_probs=255.3
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC-cc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS-TT 87 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~-~~ 87 (500)
..+||++++.++.||++|++.|+++|+++||+|+++++....+.+.+. ++++..++...+....... ..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT----------GPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------SCEEEECCCCSCCTTSCGGGGC
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEEcCCcCccccccccccc
Confidence 347999999999999999999999999999999999998876665553 6888888765443210000 01
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccchhHHHHHhh-hhh
Q 010825 88 QDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISACSFMGFKQ-FRT 166 (500)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~-~~~ 166 (500)
.++...+..+...+ ...+..+.+.++.. +||+||+|.+.+++..+|+++|||+|.+++....... +.. ...
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~~ 147 (430)
T 2iyf_A 76 STLLDNVEPFLNDA-IQALPQLADAYADD------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVAE 147 (430)
T ss_dssp SSHHHHHHHHHHHH-HHHHHHHHHHHTTS------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTHH
T ss_pred hhhHHHHHHHHHHH-HHHHHHHHHHhhcc------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccccccc
Confidence 23333333333333 33445555555544 9999999987778999999999999998766431100 000 000
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHH------HHhccccCcEEEEcChH
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVE------ATENASKASAIIIHTFD 240 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ns~~ 240 (500)
+. +. .....++. ..+ .....+.+.. ..+....++.+++++.+
T Consensus 148 ~~------------~~------~~~~~~~~--------~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 195 (430)
T 2iyf_A 148 PM------------WR------EPRQTERG--------RAY------YARFEAWLKENGITEHPDTFASHPPRSLVLIPK 195 (430)
T ss_dssp HH------------HH------HHHHSHHH--------HHH------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCG
T ss_pred ch------------hh------hhccchHH--------HHH------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcH
Confidence 00 00 00000000 000 0000001100 00111246788999988
Q ss_pred HhhHHHHHHHhhhCCCc-ceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHH
Q 010825 241 ALEQQVLNALSFIFPLQ-LFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQ 319 (500)
Q Consensus 241 ~le~~~~~~~~~~~p~~-~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~ 319 (500)
.+++. ...++.+ +++|||...... +..+|.+..+++++||+++||......+.
T Consensus 196 ~~~~~-----~~~~~~~~v~~vG~~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~ 249 (430)
T 2iyf_A 196 ALQPH-----ADRVDEDVYTFVGACQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAF 249 (430)
T ss_dssp GGSTT-----GGGSCTTTEEECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHH
T ss_pred HhCCC-----cccCCCccEEEeCCcCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHH
Confidence 88765 2333337 999998642211 01236554445689999999998556778
Q ss_pred HHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcC
Q 010825 320 LIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAG 398 (500)
Q Consensus 320 ~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~G 398 (500)
+..++++++.. +.+++|.++.+..... + +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|
T Consensus 250 ~~~~~~~l~~~~~~~~~~~~G~~~~~~~-------l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G 319 (430)
T 2iyf_A 250 YRECVRAFGNLPGWHLVLQIGRKVTPAE-------L-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATA 319 (430)
T ss_dssp HHHHHHHHTTCTTEEEEEECC---CGGG-------G-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEEeCCCCChHH-------h-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhC
Confidence 88899999886 7788888875432111 1 123568999999999999999998 99999999999999999
Q ss_pred CceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCC
Q 010825 399 VPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGS 477 (500)
Q Consensus 399 vP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 477 (500)
+|+|++|...||..||.++ ++.|+|+.+ . ..+++++|.++|.++++|++ ++++++++++.+.+. ++
T Consensus 320 ~P~i~~p~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~~----~~ 386 (430)
T 2iyf_A 320 TPMIAVPQAVDQFGNADML-QGLGVARKL-----ATEEATADLLRETALALVDDPE---VARRLRRIQAEMAQE----GG 386 (430)
T ss_dssp CCEEECCCSHHHHHHHHHH-HHTTSEEEC-----CCC-CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHHH----CH
T ss_pred CCEEECCCccchHHHHHHH-HHcCCEEEc-----CCCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHhc----Cc
Confidence 9999999999999999999 679999999 6 57899999999999999887 999999999988862 34
Q ss_pred hHHHHHHHHHH
Q 010825 478 SATNLEKLVNQ 488 (500)
Q Consensus 478 ~~~~~~~l~~~ 488 (500)
.+..++.+.+.
T Consensus 387 ~~~~~~~i~~~ 397 (430)
T 2iyf_A 387 TRRAADLIEAE 397 (430)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 44555544443
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.1e-38 Score=319.74 Aligned_cols=375 Identities=12% Similarity=0.103 Sum_probs=240.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCC--CCC-----
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLP--ASS----- 81 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~--~~~----- 81 (500)
..|||++++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.|..++.... ...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~----------G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA----------GLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------TCCEEECSCCCCHHHHHHHTTH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC----------CCceeecCCccchHHHhhhhhc
Confidence 348999999999999999999999999999999999998887776664 788888875421 000
Q ss_pred --------CCC-C--cc-ccHH---HHHHHHHHh----ccch-HHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHH
Q 010825 82 --------DES-S--TT-QDMY---SLCESIMNN----VMLH-PFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQ 141 (500)
Q Consensus 82 --------~~~-~--~~-~~~~---~~~~~~~~~----~~~~-~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~ 141 (500)
.+. . .. ..+. ..+..+... .... .+.++++.+++. +||+||+|....++..+|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW------RPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH------CCSEEEECTTCTHHHHHHH
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc------CCCEEEecCcchhHHHHHH
Confidence 000 0 00 0111 111222211 1012 556665555444 9999999997788999999
Q ss_pred HhCCCeEEEeccchhHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHH
Q 010825 142 QLGLPIVLLFTISACSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLC 221 (500)
Q Consensus 142 ~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (500)
.+|||+|.+...+.......... ....++.|.. . . .+...+.+
T Consensus 163 ~lgiP~v~~~~~~~~~~~~~~~~--~~~~~~~~~~------------------~--------~---------~~~~~~~l 205 (441)
T 2yjn_A 163 VTGTPHARLLWGPDITTRARQNF--LGLLPDQPEE------------------H--------R---------EDPLAEWL 205 (441)
T ss_dssp HHTCCEEEECSSCCHHHHHHHHH--HHHGGGSCTT------------------T--------C---------CCHHHHHH
T ss_pred HcCCCEEEEecCCCcchhhhhhh--hhhccccccc------------------c--------c---------cchHHHHH
Confidence 99999999864432211100000 0000111100 0 0 00011111
Q ss_pred HHHHhcc---------ccCcEEEEcChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhh
Q 010825 222 VEATENA---------SKASAIIIHTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETEC 292 (500)
Q Consensus 222 ~~~~~~~---------~~~~~~l~ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l 292 (500)
....+.. ...+.++..+.+.++++ .. ++ . ..+++.. +..+.++
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-----~~-~~-~-~~~~~~~--------------------~~~~~~~ 257 (441)
T 2yjn_A 206 TWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-----TG-LK-T-VGMRYVD--------------------YNGPSVV 257 (441)
T ss_dssp HHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-----CC-CC-E-EECCCCC--------------------CCSSCCC
T ss_pred HHHHHHcCCCCCCccccCCCeEEEecCccccCC-----CC-CC-C-CceeeeC--------------------CCCCccc
Confidence 1111110 01334444443333321 11 11 0 1111110 0011235
Q ss_pred hhhhcCCCCCceEEEeecccccc---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccc
Q 010825 293 LQWLDSKEPNSVIYVNFGSIIIM---NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCP 369 (500)
Q Consensus 293 ~~~l~~~~~~~vV~vs~Gs~~~~---~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p 369 (500)
.+|++..+++++|||++||.... ..+.+..+++++...+.++||+.+...... +. ..++|+.+.+|+|
T Consensus 258 ~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~----l~-----~~~~~v~~~~~~~ 328 (441)
T 2yjn_A 258 PEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEG----VA-----NIPDNVRTVGFVP 328 (441)
T ss_dssp CGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSS----CS-----SCCSSEEECCSCC
T ss_pred chHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhh----hc-----cCCCCEEEecCCC
Confidence 67988666678999999998653 335567788899888999999887543211 11 1356999999999
Q ss_pred hhHhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHH
Q 010825 370 QEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVREL 448 (500)
Q Consensus 370 q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~v 448 (500)
|.++|+.+++ ||||||+||++||+++|+|+|++|+..||+.||.++ ++.|+|+.+ + ..+++++|.++|.++
T Consensus 329 ~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 329 MHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIAL-----PVPELTPDQLRESVKRV 400 (441)
T ss_dssp HHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEEC-----CTTTCCHHHHHHHHHHH
T ss_pred HHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEc-----ccccCCHHHHHHHHHHH
Confidence 9999999998 999999999999999999999999999999999999 689999999 6 578999999999999
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q 010825 449 MGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQ 488 (500)
Q Consensus 449 l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~ 488 (500)
++|++ ++++++++++.+.+ .+..++.++.+.+.
T Consensus 401 l~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 401 LDDPA---HRAGAARMRDDMLA----EPSPAEVVGICEEL 433 (441)
T ss_dssp HHCHH---HHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred hcCHH---HHHHHHHHHHHHHc----CCCHHHHHHHHHHH
Confidence 99987 99999999999986 23334444444433
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.3e-35 Score=297.59 Aligned_cols=351 Identities=13% Similarity=0.120 Sum_probs=218.3
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCC---------
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLP--------- 78 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~--------- 78 (500)
..+|||+|++.++.||++|++.|+++|.++||+|++++++.+.+.+.+. ++.+..++....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA----------GLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT----------TCCEEEEESSCCHHHHHSBCT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC----------CCeeEecCCccchHhhhhhhc
Confidence 4569999999999999999999999999999999999998877777665 677776652110
Q ss_pred CCCC-CC--CccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEeccch
Q 010825 79 ASSD-ES--STTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTISA 155 (500)
Q Consensus 79 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 155 (500)
.... .. .....+......+.... ...+.++.+.+.+. +||+||+|...+++..+|+.+|||+|.+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~ 155 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLV-LRMRDEALALAERW------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLA 155 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC
T ss_pred cCcccccccchhhHHHHHHHHHHHHH-HHHHHHHHHHHHhC------CCCEEEECccccHHHHHHHhhCCCEEEeccCCC
Confidence 0000 00 00001111112222222 23333443333333 999999998778899999999999998765432
Q ss_pred hHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEE
Q 010825 156 CSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAII 235 (500)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (500)
............ +... .. .+.. ......+..+
T Consensus 156 ~~~~~~~~~~~~------------------l~~~---~~---~~~~------------------------~~~~~~~~~~ 187 (398)
T 4fzr_A 156 SPELIKSAGVGE------------------LAPE---LA---ELGL------------------------TDFPDPLLSI 187 (398)
T ss_dssp CCHHHHHHHHHH------------------THHH---HH---TTTC------------------------SSCCCCSEEE
T ss_pred CchhhhHHHHHH------------------HHHH---HH---HcCC------------------------CCCCCCCeEE
Confidence 111000000000 0000 00 0000 0001123333
Q ss_pred EcChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecccccc
Q 010825 236 IHTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIM 315 (500)
Q Consensus 236 ~ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~ 315 (500)
......+... ......++.++++.. ...++.+|+...+++++||+++||....
T Consensus 188 ~~~~~~~~~~-----~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~ 240 (398)
T 4fzr_A 188 DVCPPSMEAQ-----PKPGTTKMRYVPYNG----------------------RNDQVPSWVFEERKQPRLCLTFGTRVPL 240 (398)
T ss_dssp ECSCGGGC---------CCCEECCCCCCCC----------------------SSCCCCHHHHSCCSSCEEECC-------
T ss_pred EeCChhhCCC-----CCCCCCCeeeeCCCC----------------------CCCCCchhhhcCCCCCEEEEEccCcccc
Confidence 3333333332 111110112222110 0112455776555678999999999632
Q ss_pred --------CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecC
Q 010825 316 --------NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSG 387 (500)
Q Consensus 316 --------~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG 387 (500)
..+.+..+++++.+.+.++||+.+.... +. .+..++|+.+.+|+|+.++|+++++ ||||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~--------~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG 309 (398)
T 4fzr_A 241 PNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA--------QT-LQPLPEGVLAAGQFPLSAIMPACDV--VVHHGG 309 (398)
T ss_dssp ---------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCC
T ss_pred cccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch--------hh-hccCCCcEEEeCcCCHHHHHhhCCE--EEecCC
Confidence 3456788899998888899988765421 11 1234679999999999999999999 999999
Q ss_pred chhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHH
Q 010825 388 WNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKR 466 (500)
Q Consensus 388 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~ 466 (500)
.||+.||+++|+|+|++|...||+.||.++ ++.|+|+.+ + ..++++.|.++|.++++|++ +++++++.++
T Consensus 310 ~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~ 380 (398)
T 4fzr_A 310 HGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEV-----PWEQAGVESVLAACARIRDDSS---YVGNARRLAA 380 (398)
T ss_dssp HHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEEC-----C-------CHHHHHHHHHHCTH---HHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEec-----CcccCCHHHHHHHHHHHHhCHH---HHHHHHHHHH
Confidence 999999999999999999999999999999 689999999 7 67899999999999999998 9999999999
Q ss_pred HHHH
Q 010825 467 FAEE 470 (500)
Q Consensus 467 ~~~~ 470 (500)
.+.+
T Consensus 381 ~~~~ 384 (398)
T 4fzr_A 381 EMAT 384 (398)
T ss_dssp HHTT
T ss_pred HHHc
Confidence 9885
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.6e-34 Score=289.87 Aligned_cols=352 Identities=13% Similarity=0.129 Sum_probs=233.7
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCC-------
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASS------- 81 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~------- 81 (500)
..|||+|++.++.||++|++.|+++|.++||+|+++++ .+.+.+... ++.+..++.......
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA----------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT----------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC----------CCeeEecCCccCHHHHhhhccc
Confidence 34899999999999999999999999999999999999 777776664 788888874311000
Q ss_pred -----------CCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEE
Q 010825 82 -----------DESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 82 -----------~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 150 (500)
........+...+......+ ...+.++++++ +||+||+|...+++..+|+.+|||+|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~---------~pDlVv~d~~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPL-VDGTMALVDDY---------RPDLVVYEQGATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGG-HHHHHHHHHHH---------CCSEEEEETTCHHHHHHHHHHTCCEEEE
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHH-HHHHHHHHHHc---------CCCEEEECchhhHHHHHHHHcCCCEEEE
Confidence 00111222222333333333 34445555554 9999999988888999999999999986
Q ss_pred eccchhHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhcccc
Q 010825 151 FTISACSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASK 230 (500)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
......... ..... ... ....+.........
T Consensus 158 ~~~~~~~~~----~~~~~------------------------~~~---------------------l~~~~~~~~~~~~~ 188 (398)
T 3oti_A 158 NQSAWRTRG----MHRSI------------------------ASF---------------------LTDLMDKHQVSLPE 188 (398)
T ss_dssp CCTTCCCTT----HHHHH------------------------HTT---------------------CHHHHHHTTCCCCC
T ss_pred eccCCCccc----hhhHH------------------------HHH---------------------HHHHHHHcCCCCCC
Confidence 533111000 00000 000 00000000000112
Q ss_pred CcEEEEcChHHhhHHHHHHHh--hhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEe
Q 010825 231 ASAIIIHTFDALEQQVLNALS--FIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVN 308 (500)
Q Consensus 231 ~~~~l~ns~~~le~~~~~~~~--~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs 308 (500)
.+..+......+..+ . ...+ +.++ |.. ....+.+|+...+++++||++
T Consensus 189 ~~~~~~~~~~~~~~~-----~~~~~~~--~~~~-~~~----------------------~~~~~~~~~~~~~~~~~v~v~ 238 (398)
T 3oti_A 189 PVATIESFPPSLLLE-----AEPEGWF--MRWV-PYG----------------------GGAVLGDRLPPVPARPEVAIT 238 (398)
T ss_dssp CSEEECSSCGGGGTT-----SCCCSBC--CCCC-CCC----------------------CCEECCSSCCCCCSSCEEEEC
T ss_pred CCeEEEeCCHHHCCC-----CCCCCCC--cccc-CCC----------------------CCcCCchhhhcCCCCCEEEEE
Confidence 233333332222211 1 0011 1111 000 011234577655567899999
Q ss_pred ecccccc--CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeec
Q 010825 309 FGSIIIM--NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHS 386 (500)
Q Consensus 309 ~Gs~~~~--~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~Hg 386 (500)
+||.... ..+.+..++++++..+.+++|+.+...... + +..++|+.+.+|+|+.++|+++++ |||||
T Consensus 239 ~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~----l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~ 307 (398)
T 3oti_A 239 MGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISP----L-----GTLPRNVRAVGWTPLHTLLRTCTA--VVHHG 307 (398)
T ss_dssp CTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGG----G-----CSCCTTEEEESSCCHHHHHTTCSE--EEECC
T ss_pred cCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhh----h-----ccCCCcEEEEccCCHHHHHhhCCE--EEECC
Confidence 9999643 566788899999988999999987643111 1 123669999999999999999998 99999
Q ss_pred CchhHHHHHhcCCceeeCCcccchhhhH--HHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHH
Q 010825 387 GWNSTIESLCAGVPMICWPFLGDQPTNC--RYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASK 463 (500)
Q Consensus 387 G~~s~~eal~~GvP~v~~P~~~DQ~~na--~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~ 463 (500)
|.||+.||+++|+|+|++|+..||+.|| .++ ++.|+|+.+ + ...+++.|. ++++|++ +++++++
T Consensus 308 G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~-----~~~~~~~~~l~----~ll~~~~---~~~~~~~ 374 (398)
T 3oti_A 308 GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVS-----TSDKVDADLLR----RLIGDES---LRTAARE 374 (398)
T ss_dssp CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEEC-----CGGGCCHHHHH----HHHHCHH---HHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEee-----CCCCCCHHHHH----HHHcCHH---HHHHHHH
Confidence 9999999999999999999999999999 999 689999999 7 577888877 7888887 9999999
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHHH
Q 010825 464 WKRFAEEATAPDGSSATNLEKLVNQV 489 (500)
Q Consensus 464 l~~~~~~~~~~~g~~~~~~~~l~~~~ 489 (500)
+++.+.+ ..+. ..+.+.++.+
T Consensus 375 ~~~~~~~----~~~~-~~~~~~l~~l 395 (398)
T 3oti_A 375 VREEMVA----LPTP-AETVRRIVER 395 (398)
T ss_dssp HHHHHHT----SCCH-HHHHHHHHHH
T ss_pred HHHHHHh----CCCH-HHHHHHHHHH
Confidence 9999986 3333 4444444444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=4.5e-33 Score=280.10 Aligned_cols=360 Identities=14% Similarity=0.149 Sum_probs=231.0
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeC-CCCCCCCCCC-----
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAI-PDGLPASSDE----- 83 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l-~~~~~~~~~~----- 83 (500)
+|||+|++.++.||++|++.|+++|.++||+|+++++....+.+... ++.+..+ +.........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA----------GLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB----------TCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC----------CCceeeecCCccchhhhhhhccc
Confidence 58999999999999999999999999999999999998777666664 6777776 3211000000
Q ss_pred -CCcc---ccHHHHHHHHHHhccchH-------HHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEec
Q 010825 84 -SSTT---QDMYSLCESIMNNVMLHP-------FLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 84 -~~~~---~~~~~~~~~~~~~~~~~~-------l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~ 152 (500)
.... .........+.... ... +.++.+.+.+. +||+||+|...+++..+|+.+|||++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTA-SNVAQSSLDQLPEYLRLAEAW------RPSVLLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH------CCSEEEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred ccccccccccchhHHHHHHHHH-HHHhhcchhhHHHHHHHHHhc------CCCEEEeCcchhHHHHHHHHhCCCEEEEec
Confidence 0000 00011111111111 111 44444444443 999999998777888999999999998754
Q ss_pred cchhHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHH-hccccC
Q 010825 153 ISACSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEAT-ENASKA 231 (500)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 231 (500)
......... ... ........+.... ......
T Consensus 144 ~~~~~~~~~---~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~ 175 (391)
T 3tsa_A 144 GVDPTAGPF---SDR---------------------------------------------AHELLDPVCRHHGLTGLPTP 175 (391)
T ss_dssp SCCCTTTHH---HHH---------------------------------------------HHHHHHHHHHHTTSSSSCCC
T ss_pred CCccccccc---cch---------------------------------------------HHHHHHHHHHHcCCCCCCCC
Confidence 322110000 000 0000000000000 000112
Q ss_pred cEEEEcChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecc
Q 010825 232 SAIIIHTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGS 311 (500)
Q Consensus 232 ~~~l~ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs 311 (500)
+..+..+..+++.. ......++.++ |+. ....+..|+...+++++|++++||
T Consensus 176 ~~~~~~~~~~~~~~-----~~~~~~~~~~~-p~~----------------------~~~~~~~~~~~~~~~~~vlv~~G~ 227 (391)
T 3tsa_A 176 ELILDPCPPSLQAS-----DAPQGAPVQYV-PYN----------------------GSGAFPAWGAARTSARRVCICMGR 227 (391)
T ss_dssp SEEEECSCGGGSCT-----TSCCCEECCCC-CCC----------------------CCEECCGGGSSCCSSEEEEEECCH
T ss_pred ceEEEecChhhcCC-----CCCccCCeeee-cCC----------------------CCcCCCchhhcCCCCCEEEEEcCC
Confidence 44444443333222 11111012222 110 011134577655567899999999
Q ss_pred ccc--cC-HHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecC
Q 010825 312 III--MN-KQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSG 387 (500)
Q Consensus 312 ~~~--~~-~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG 387 (500)
... .. .+.+..++++ ++. +.+++|..++..... + +..++|+.+.+|+|+.++|+++++ ||||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~----l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G 295 (391)
T 3tsa_A 228 MVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRAL----L-----TDLPDNARIAESVPLNLFLRTCEL--VICAGG 295 (391)
T ss_dssp HHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGG----C-----TTCCTTEEECCSCCGGGTGGGCSE--EEECCC
T ss_pred CCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhh----c-----ccCCCCEEEeccCCHHHHHhhCCE--EEeCCC
Confidence 843 34 7778888888 877 678888876432111 1 123569999999999999999998 999999
Q ss_pred chhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCC---CcCHHHHHHHHHHHhCCChhHHHHHHHHHH
Q 010825 388 WNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDN---RVSRNEVEKQVRELMGGEKGKQMRNKASKW 464 (500)
Q Consensus 388 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~---~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 464 (500)
.||+.||+++|+|+|++|...||+.|+.++ ++.|+|+.+ .. ..+++.|.++|.++++|++ ++++++++
T Consensus 296 ~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~ 366 (391)
T 3tsa_A 296 SGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICL-----PDEQAQSDHEQFTDSIATVLGDTG---FAAAAIKL 366 (391)
T ss_dssp HHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEEC-----CSHHHHTCHHHHHHHHHHHHTCTH---HHHHHHHH
T ss_pred HHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEec-----CcccccCCHHHHHHHHHHHHcCHH---HHHHHHHH
Confidence 999999999999999999999999999999 689999999 53 4789999999999999998 99999999
Q ss_pred HHHHHHHhCCCCChHHHHHHHHH
Q 010825 465 KRFAEEATAPDGSSATNLEKLVN 487 (500)
Q Consensus 465 ~~~~~~~~~~~g~~~~~~~~l~~ 487 (500)
++.+.+ .++....++.+.+
T Consensus 367 ~~~~~~----~~~~~~~~~~i~~ 385 (391)
T 3tsa_A 367 SDEITA----MPHPAALVRTLEN 385 (391)
T ss_dssp HHHHHT----SCCHHHHHHHHHH
T ss_pred HHHHHc----CCCHHHHHHHHHH
Confidence 999985 3444455544433
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3.8e-31 Score=267.85 Aligned_cols=368 Identities=17% Similarity=0.173 Sum_probs=240.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCC-----------
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDG----------- 76 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~----------- 76 (500)
..+|||++++.++.||++|++.|+++|.++||+|++++++...+.+... ++.+..++..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL----------GFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCCHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc----------CCceeecCcccccchhhhhhh
Confidence 5569999999999999999999999999999999999998776666554 6888887631
Q ss_pred -CCCC-CCCC---CccccHHHHHHHH-HHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEE
Q 010825 77 -LPAS-SDES---STTQDMYSLCESI-MNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 77 -~~~~-~~~~---~~~~~~~~~~~~~-~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 150 (500)
.... .... .....+...+... ...+ ...+.+++++. +||+||+|....++..+|+++|||+|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~---------~pDvVv~~~~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLSELPQIVFGRVIPQRV-FDELQPVIERL---------RPDLVVQEISNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHSCSCCTTCCHHHHTTSHHHHHHTHHHHHH-HHHHHHHHHHH---------CCSEEEEETTCHHHHHHHHHHTCCEEEE
T ss_pred hhcccCCccCChhHhhHHHHHHHhccchHHH-HHHHHHHHHhc---------CCCEEEECchhhHHHHHHHHcCCCEEEe
Confidence 0000 0000 0011111111111 1111 23344555554 9999999987778889999999999986
Q ss_pred eccchhHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhcccc
Q 010825 151 FTISACSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASK 230 (500)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
.................. ..... .-++... .. .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~------------------~~~~~-~~g~~~~-----~~-------------------~~~~~ 194 (412)
T 3otg_A 158 GVGRDTPDDLTRSIEEEV------------------RGLAQ-RLGLDLP-----PG-------------------RIDGF 194 (412)
T ss_dssp CCSCCCCSHHHHHHHHHH------------------HHHHH-HTTCCCC-----SS-------------------CCGGG
T ss_pred cccccCchhhhHHHHHHH------------------HHHHH-HcCCCCC-----cc-------------------cccCC
Confidence 544221000000000000 00000 0000000 00 00123
Q ss_pred CcEEEEcChHHhhHHHHHHHhhhCCCc---ceecCCchhhhhhhhhhcccccccCCCccchhhhhhhh-hcCCCCCceEE
Q 010825 231 ASAIIIHTFDALEQQVLNALSFIFPLQ---LFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQW-LDSKEPNSVIY 306 (500)
Q Consensus 231 ~~~~l~ns~~~le~~~~~~~~~~~p~~---~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vV~ 306 (500)
++.++..+...++.. ....... +.++++- ...+..+| ....+++++|+
T Consensus 195 ~d~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~vl 246 (412)
T 3otg_A 195 GNPFIDIFPPSLQEP-----EFRARPRRHELRPVPFA-----------------------EQGDLPAWLSSRDTARPLVY 246 (412)
T ss_dssp GCCEEECSCGGGSCH-----HHHTCTTEEECCCCCCC-----------------------CCCCCCGGGGGSCTTSCEEE
T ss_pred CCeEEeeCCHHhcCC-----cccCCCCcceeeccCCC-----------------------CCCCCCCccccccCCCCEEE
Confidence 445555554444432 1111101 1111110 01123446 33234567999
Q ss_pred EeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeec
Q 010825 307 VNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHS 386 (500)
Q Consensus 307 vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~Hg 386 (500)
+++|+......+.+..+++++++.+.+++|+.+....... +. ..++|+.+.+|+|+.++|+++++ ||+||
T Consensus 247 v~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~---l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~ 316 (412)
T 3otg_A 247 LTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG---LG-----EVPANVRLESWVPQAALLPHVDL--VVHHG 316 (412)
T ss_dssp EECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT---CC-----CCCTTEEEESCCCHHHHGGGCSE--EEESC
T ss_pred EEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh---hc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECC
Confidence 9999997667788889999999888899998876542111 11 13568999999999999999998 99999
Q ss_pred CchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHH
Q 010825 387 GWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWK 465 (500)
Q Consensus 387 G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 465 (500)
|.||+.||+++|+|+|++|...||..|+.++ ++.|+|..+ . ...++++|.++|.++++|++ +++++.+.+
T Consensus 317 g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~-----~~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~ 387 (412)
T 3otg_A 317 GSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHL-----LPDNISPDSVSGAAKRLLAEES---YRAGARAVA 387 (412)
T ss_dssp CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC-----CGGGCCHHHHHHHHHHHHHCHH---HHHHHHHHH
T ss_pred chHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEec-----CcccCCHHHHHHHHHHHHhCHH---HHHHHHHHH
Confidence 9999999999999999999999999999999 689999999 7 57899999999999999987 999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHH
Q 010825 466 RFAEEATAPDGSSATNLEKLVNQV 489 (500)
Q Consensus 466 ~~~~~~~~~~g~~~~~~~~l~~~~ 489 (500)
+.+.+ ..+.+..++.+.+.+
T Consensus 388 ~~~~~----~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 388 AEIAA----MPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHH----SCCHHHHHTTHHHHH
T ss_pred HHHhc----CCCHHHHHHHHHHHh
Confidence 99887 344455555554443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=3.7e-27 Score=234.11 Aligned_cols=310 Identities=15% Similarity=0.117 Sum_probs=188.9
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcch--hhhhhhcCCCCCCCCCCeeEEeCCC-CCCCCCCCCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNH--RRFLKSRGEHSLGGLPSFRFEAIPD-GLPASSDESST 86 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~f~~l~~-~~~~~~~~~~~ 86 (500)
|.||++...|+-||++|.++||++|.++||+|+|+++.... +.+.+. ++++..++. ++.... ....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~----------g~~~~~i~~~~~~~~~-~~~~ 70 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA----------GLPLHLIQVSGLRGKG-LKSL 70 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG----------TCCEEECC-------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc----------CCcEEEEECCCcCCCC-HHHH
Confidence 45899998888899999999999999999999999976542 234333 677777752 222110 0111
Q ss_pred cccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEEEeccchhHHHHHhhh
Q 010825 87 TQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVLLFTISACSFMGFKQF 164 (500)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 164 (500)
...+..++..+ ....+++++. +||+||++.... .+..+|+.+|||+++.-..
T Consensus 71 ~~~~~~~~~~~------~~~~~~l~~~---------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n----------- 124 (365)
T 3s2u_A 71 VKAPLELLKSL------FQALRVIRQL---------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN----------- 124 (365)
T ss_dssp --CHHHHHHHH------HHHHHHHHHH---------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-----------
T ss_pred HHHHHHHHHHH------HHHHHHHHhc---------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-----------
Confidence 11222222211 1223556665 999999997554 3567799999999974211
Q ss_pred hhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhH
Q 010825 165 RTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQ 244 (500)
Q Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 244 (500)
.++++.+ +++ .+.++.++.. +++.
T Consensus 125 ---------------------------~~~G~~n--------------------r~l------~~~a~~v~~~-~~~~-- 148 (365)
T 3s2u_A 125 ---------------------------AVAGTAN--------------------RSL------APIARRVCEA-FPDT-- 148 (365)
T ss_dssp ---------------------------SSCCHHH--------------------HHH------GGGCSEEEES-STTS--
T ss_pred ---------------------------hhhhhHH--------------------Hhh------ccccceeeec-cccc--
Confidence 0111110 000 0112222221 1110
Q ss_pred HHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHHHH
Q 010825 245 QVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVA 324 (500)
Q Consensus 245 ~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~ 324 (500)
.+... +.+++|......-. . . -.......+.+++|+++.||..... ..+.+.
T Consensus 149 ------~~~~~-k~~~~g~pvr~~~~----------~--~-------~~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~ 200 (365)
T 3s2u_A 149 ------FPASD-KRLTTGNPVRGELF----------L--D-------AHARAPLTGRRVNLLVLGGSLGAEP--LNKLLP 200 (365)
T ss_dssp ------SCC----CEECCCCCCGGGC----------C--C-------TTSSCCCTTSCCEEEECCTTTTCSH--HHHHHH
T ss_pred ------ccCcC-cEEEECCCCchhhc----------c--c-------hhhhcccCCCCcEEEEECCcCCccc--cchhhH
Confidence 01112 55666654322110 0 0 0011112234578999999985432 233455
Q ss_pred HHHHhC----CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchh-HhhccCCcceeEeecCchhHHHHHhcCC
Q 010825 325 MGLVNS----NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQE-EVLNHPAIGGFFTHSGWNSTIESLCAGV 399 (500)
Q Consensus 325 ~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~-~lL~~~~~~~~I~HgG~~s~~eal~~Gv 399 (500)
+++... +..++|..+.+..+. . ....+..+.++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+
T Consensus 201 ~al~~l~~~~~~~vi~~~G~~~~~~----~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~ 273 (365)
T 3s2u_A 201 EALAQVPLEIRPAIRHQAGRQHAEI----T-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGL 273 (365)
T ss_dssp HHHHTSCTTTCCEEEEECCTTTHHH----H-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHhcccccceEEEEecCcccccc----c-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCC
Confidence 666554 334566655432100 0 11123345688899999985 69999999 999999999999999999
Q ss_pred ceeeCCcc----cchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCCh
Q 010825 400 PMICWPFL----GDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 400 P~v~~P~~----~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~ 453 (500)
|+|++|+. .+|..||+.+ ++.|+|+.+ . ..++++.|.++|.++++|++
T Consensus 274 P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l-----~~~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 274 PAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLL-----PQKSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp CEEECC-----CCHHHHHHHHH-HTTTSEEEC-----CTTTCCHHHHHHHHHHHHHCTH
T ss_pred CeEEeccCCCCCcHHHHHHHHH-HHCCCEEEe-----ecCCCCHHHHHHHHHHHHCCHH
Confidence 99999973 5799999999 689999999 6 68999999999999999986
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=3.5e-26 Score=201.91 Aligned_cols=161 Identities=23% Similarity=0.443 Sum_probs=136.0
Q ss_pred hhhhhhhhhcCCCCCceEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeee
Q 010825 288 EETECLQWLDSKEPNSVIYVNFGSII-IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIAS 366 (500)
Q Consensus 288 ~~~~l~~~l~~~~~~~vV~vs~Gs~~-~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~ 366 (500)
.+.++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.+.... + ..++|+.+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~--------~----~~~~~v~~~~ 74 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP--------D----TLGLNTRLYK 74 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC--------T----TCCTTEEEES
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc--------c----cCCCcEEEec
Confidence 45678999987666789999999986 557788889999999888899999875421 1 1256899999
Q ss_pred ccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHH
Q 010825 367 WCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQV 445 (500)
Q Consensus 367 ~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i 445 (500)
|+||.++|.|+.+.+||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+.+ + ..++.++|.++|
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i 148 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRV-----DFNTMSSTDLLNAL 148 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEEC-----CTTTCCHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEe-----ccccCCHHHHHHHH
Confidence 999999995544555999999999999999999999999999999999999 689999999 6 578999999999
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHH
Q 010825 446 RELMGGEKGKQMRNKASKWKRFAE 469 (500)
Q Consensus 446 ~~vl~~~~~~~~~~~a~~l~~~~~ 469 (500)
.++++|++ |+++++++++.++
T Consensus 149 ~~ll~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 149 KRVINDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHCHH---HHHHHHHHC----
T ss_pred HHHHcCHH---HHHHHHHHHHHhh
Confidence 99999987 9999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.84 E-value=7.9e-19 Score=174.10 Aligned_cols=334 Identities=15% Similarity=0.105 Sum_probs=200.0
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcch--hhhhhhcCCCCCCCCCCeeEEeCCCC-CCCCCCCCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNH--RRFLKSRGEHSLGGLPSFRFEAIPDG-LPASSDESST 86 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~f~~l~~~-~~~~~~~~~~ 86 (500)
+|||++++.+..||..+.+.|+++|.++||+|++++..... ..+... ++++..++.. +...
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~------ 69 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH----------GIEIDFIRISGLRGK------ 69 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG----------TCEEEECCCCCCTTC------
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc----------CCceEEecCCccCcC------
Confidence 37999999877799999999999999999999999976532 222222 5676666421 1111
Q ss_pred cccHHHHHHHHHH--hccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCc--chHHHHHHHhCCCeEEEeccchhHHHHHh
Q 010825 87 TQDMYSLCESIMN--NVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFL--PFTVTAAQQLGLPIVLLFTISACSFMGFK 162 (500)
Q Consensus 87 ~~~~~~~~~~~~~--~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 162 (500)
.....+..... .. ...+.+++++. +||+|+++... ..+..+++.+|+|+|......
T Consensus 70 --~~~~~~~~~~~~~~~-~~~l~~~l~~~---------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------- 129 (364)
T 1f0k_A 70 --GIKALIAAPLRIFNA-WRQARAIMKAY---------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------- 129 (364)
T ss_dssp --CHHHHHTCHHHHHHH-HHHHHHHHHHH---------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------
T ss_pred --ccHHHHHHHHHHHHH-HHHHHHHHHhc---------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------
Confidence 11111100000 01 12234445554 99999998743 245677889999998643210
Q ss_pred hhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHh
Q 010825 163 QFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDAL 242 (500)
Q Consensus 163 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~l 242 (500)
+++. ..+ ...+.++.+++.+...
T Consensus 130 ------------------------------~~~~--------------------~~~------~~~~~~d~v~~~~~~~- 152 (364)
T 1f0k_A 130 ------------------------------IAGL--------------------TNK------WLAKIATKVMQAFPGA- 152 (364)
T ss_dssp ------------------------------SCCH--------------------HHH------HHTTTCSEEEESSTTS-
T ss_pred ------------------------------CCcH--------------------HHH------HHHHhCCEEEecChhh-
Confidence 0000 000 0113345555544211
Q ss_pred hHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccCHHHHHH
Q 010825 243 EQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMNKQQLIE 322 (500)
Q Consensus 243 e~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~ 322 (500)
.+ ++..+|....... .... . ..+.+...+++++|+++.|+... ......
T Consensus 153 -----------~~-~~~~i~n~v~~~~-----------~~~~---~---~~~~~~~~~~~~~il~~~g~~~~--~k~~~~ 201 (364)
T 1f0k_A 153 -----------FP-NAEVVGNPVRTDV-----------LALP---L---PQQRLAGREGPVRVLVVGGSQGA--RILNQT 201 (364)
T ss_dssp -----------SS-SCEECCCCCCHHH-----------HTSC---C---HHHHHTTCCSSEEEEEECTTTCC--HHHHHH
T ss_pred -----------cC-CceEeCCccchhh-----------cccc---h---hhhhcccCCCCcEEEEEcCchHh--HHHHHH
Confidence 23 4555654321110 0000 0 01112222234678888888742 344455
Q ss_pred HHHHHHhC--CCCEEEEEcCCCCCCCCCCCchHHHH---Hhh-cCceeeeccch-hHhhccCCcceeEeecCchhHHHHH
Q 010825 323 VAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAK-EKGFIASWCPQ-EEVLNHPAIGGFFTHSGWNSTIESL 395 (500)
Q Consensus 323 l~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~-~nv~~~~~~pq-~~lL~~~~~~~~I~HgG~~s~~eal 395 (500)
++++++.. +.+++++++.+. .+.+.+ +.+ ++|.+.+|+++ .++|+.+++ +|+++|.+++.||+
T Consensus 202 li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAm 271 (364)
T 1f0k_A 202 MPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIA 271 (364)
T ss_dssp HHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHH
Confidence 55666544 455566666542 122222 222 58999999954 679999999 99999999999999
Q ss_pred hcCCceeeCCcc---cchhhhHHHhhhhhcceeEeeeCCCC-CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q 010825 396 CAGVPMICWPFL---GDQPTNCRYTCNEWGVGLEIINGGDD-NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEA 471 (500)
Q Consensus 396 ~~GvP~v~~P~~---~DQ~~na~~~~~~~G~g~~~~~~~~~-~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~ 471 (500)
++|+|+|+.|.. .||..|+..+ .+.|.|..+ + .+.+.+++.++|.++ |++ .+++..+-++...
T Consensus 272 a~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~-----~~~d~~~~~la~~i~~l--~~~---~~~~~~~~~~~~~-- 338 (364)
T 1f0k_A 272 AAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKII-----EQPQLSVDAVANTLAGW--SRE---TLLTMAERARAAS-- 338 (364)
T ss_dssp HHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEEC-----CGGGCCHHHHHHHHHTC--CHH---HHHHHHHHHHHTC--
T ss_pred HhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEe-----ccccCCHHHHHHHHHhc--CHH---HHHHHHHHHHHhh--
Confidence 999999999987 7999999999 578999998 6 567799999999988 554 4444433333222
Q ss_pred hCCCCChHHHHHHHHHHHHhc
Q 010825 472 TAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 472 ~~~~g~~~~~~~~l~~~~~~~ 492 (500)
+..+.+..++++++.+.+.
T Consensus 339 --~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 339 --IPDATERVANEVSRVARAL 357 (364)
T ss_dssp --CTTHHHHHHHHHHHHHTTC
T ss_pred --ccCHHHHHHHHHHHHHHHH
Confidence 2344455555555554433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.62 E-value=2.9e-14 Score=134.47 Aligned_cols=114 Identities=10% Similarity=0.050 Sum_probs=87.1
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHh--hcCceeeeccchh-HhhccC
Q 010825 301 PNSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFIASWCPQE-EVLNHP 377 (500)
Q Consensus 301 ~~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq~-~lL~~~ 377 (500)
+.+.|+|++|... ..+....+++++.... ++.++.+.+.. ..+.+.+.. ..|+.+..|+++. ++|..+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP------NLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT------THHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 3467999999763 2335556777776544 56666655431 223333222 2488999999986 699999
Q ss_pred CcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEe
Q 010825 378 AIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 378 ~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~ 427 (500)
++ +||+|| +|++|+++.|+|+|++|...+|..||+.+ ++.|+++.+
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~ 272 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEY 272 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEEC
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEc
Confidence 99 999999 89999999999999999999999999999 689999988
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=6.7e-15 Score=133.20 Aligned_cols=131 Identities=12% Similarity=0.084 Sum_probs=95.2
Q ss_pred CCCceEEEeeccccccCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCCCCCchHHHHHh---------h-----
Q 010825 300 EPNSVIYVNFGSIIIMNKQQLIEV-----AMGLVNSN-HPFLWIIRPDLVTGETADLPAEFEVKA---------K----- 359 (500)
Q Consensus 300 ~~~~vV~vs~Gs~~~~~~~~~~~l-----~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~---------~----- 359 (500)
+++++|||+.||... -.+.+..+ ++++...+ .++++.++..... ..+...+.. |
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-----~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-----EFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-----CCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-----hHHHHHHhhhcccccccccccccc
Confidence 346789999999832 23333333 48887777 6889988865431 011111111 1
Q ss_pred ------------c--Cceeeeccchh-Hhhc-cCCcceeEeecCchhHHHHHhcCCceeeCCcc----cchhhhHHHhhh
Q 010825 360 ------------E--KGFIASWCPQE-EVLN-HPAIGGFFTHSGWNSTIESLCAGVPMICWPFL----GDQPTNCRYTCN 419 (500)
Q Consensus 360 ------------~--nv~~~~~~pq~-~lL~-~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~ 419 (500)
. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++ +
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~ 176 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-V 176 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-H
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-H
Confidence 1 34567888875 7999 9999 99999999999999999999999984 3699999999 6
Q ss_pred hhcceeEeeeCCCCCCcCHHHHHHHHHHH
Q 010825 420 EWGVGLEIINGGDDNRVSRNEVEKQVREL 448 (500)
Q Consensus 420 ~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 448 (500)
+.|+++.+ +++.|.++|.++
T Consensus 177 ~~G~~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 ELGYVWSC---------APTETGLIAGLR 196 (224)
T ss_dssp HHSCCCEE---------CSCTTTHHHHHH
T ss_pred HCCCEEEc---------CHHHHHHHHHHH
Confidence 79998755 456677777776
No 25
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.41 E-value=1.4e-11 Score=123.43 Aligned_cols=160 Identities=13% Similarity=0.149 Sum_probs=95.9
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCCCCCchHHHHHh--hcCceeeeccch---
Q 010825 301 PNSVIYVNFGSIIIMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFIASWCPQ--- 370 (500)
Q Consensus 301 ~~~vV~vs~Gs~~~~~~~~~~~l~~al~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq--- 370 (500)
++++++++.|....... .+..+++++.. .+.++|+..+.+.. ..+.+.+.. .+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~------~~~~l~~~~~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNPA------VREKAMAILGGHERIHLIEPLDAIDF 295 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHH------HHHHHHHHhCCCCCEEEeCCCCHHHH
Confidence 35678887665322221 23445555543 23455555432210 111111111 257888888863
Q ss_pred hHhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC
Q 010825 371 EEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMG 450 (500)
Q Consensus 371 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 450 (500)
..+|+.+++ +|+-+|..+ .||.++|+|+|++|-..+++.. + +.|.|+.+ .. ++++|.++|.++++
T Consensus 296 ~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~---v--~~g~~~lv-----~~--d~~~l~~ai~~ll~ 360 (403)
T 3ot5_A 296 HNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG---I--EAGTLKLI-----GT--NKENLIKEALDLLD 360 (403)
T ss_dssp HHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH---H--HHTSEEEC-----CS--CHHHHHHHHHHHHH
T ss_pred HHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh---e--eCCcEEEc-----CC--CHHHHHHHHHHHHc
Confidence 468999998 998875333 7999999999999777776642 3 47888777 42 89999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 010825 451 GEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQV 489 (500)
Q Consensus 451 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~ 489 (500)
|+. .+++.++ .... ...++.+++.++.+.+.+
T Consensus 361 ~~~---~~~~m~~---~~~~-~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 361 NKE---SHDKMAQ---AANP-YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp CHH---HHHHHHH---SCCT-TCCSCHHHHHHHHHHHHH
T ss_pred CHH---HHHHHHh---hcCc-ccCCcHHHHHHHHHHHHh
Confidence 875 4433332 2221 234555555555555444
No 26
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.36 E-value=1.7e-10 Score=115.28 Aligned_cols=131 Identities=11% Similarity=0.116 Sum_probs=82.2
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchHHHHH--hhcCceeeeccc---h
Q 010825 301 PNSVIYVNFGSIIIMNKQQLIEVAMGLVNS-----NHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFIASWCP---Q 370 (500)
Q Consensus 301 ~~~vV~vs~Gs~~~~~~~~~~~l~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p---q 370 (500)
++++|+++.+-....... +..+++|+... +.++|+..+.+.. ..+.+.+. ..+++.+.++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~------~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNPN------VREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHH------HHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCChH------HHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 356777765322222222 45566666542 3455554432210 11112111 124788877764 4
Q ss_pred hHhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC
Q 010825 371 EEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMG 450 (500)
Q Consensus 371 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 450 (500)
..+|+.+++ ||+-+| |.+.||.++|+|+|+..-..+++. .+ +.|.++.+ .. ++++|.++|.++++
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v--~~G~~~lv-----~~--d~~~l~~ai~~ll~ 366 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV--AAGTVKLV-----GT--NQQQICDALSLLLT 366 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH--HHTSEEEC-----TT--CHHHHHHHHHHHHH
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH--HcCceEEc-----CC--CHHHHHHHHHHHHc
Confidence 578999998 999988 666899999999999865555532 23 46887666 32 69999999999999
Q ss_pred CCh
Q 010825 451 GEK 453 (500)
Q Consensus 451 ~~~ 453 (500)
|+.
T Consensus 367 d~~ 369 (396)
T 3dzc_A 367 DPQ 369 (396)
T ss_dssp CHH
T ss_pred CHH
Confidence 875
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.35 E-value=1.3e-09 Score=108.34 Aligned_cols=348 Identities=9% Similarity=0.040 Sum_probs=186.9
Q ss_pred CCCcEEEEEcC--C--CcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPS--P--SQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE 83 (500)
Q Consensus 8 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~ 83 (500)
+++|||++++. + ..|.-..+..|++.| +||+|++++............ ...++.+..++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD------KTLDYEVIRWPRSVMLP--- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH------TTCSSEEEEESSSSCCS---
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc------cccceEEEEcccccccc---
Confidence 34689999975 2 356888899999999 799999999866543211110 11256666665322111
Q ss_pred CCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEE-EeccchhHHHH
Q 010825 84 SSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVL-LFTISACSFMG 160 (500)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~ 160 (500)
.. . . ...+.+++++. +||+|++....+ ....+++++|+|.++ ........+.
T Consensus 71 -----~~-----~----~-~~~l~~~~~~~---------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~- 125 (394)
T 3okp_A 71 -----TP-----T----T-AHAMAEIIRER---------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS- 125 (394)
T ss_dssp -----CH-----H----H-HHHHHHHHHHT---------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT-
T ss_pred -----ch-----h----h-HHHHHHHHHhc---------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh-
Confidence 11 1 1 12234555554 899999876443 455668899999554 3222111000
Q ss_pred HhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChH
Q 010825 161 FKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFD 240 (500)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~ 240 (500)
. ....... .....+.++.+++.|..
T Consensus 126 ----------------------------------~------------------~~~~~~~---~~~~~~~~d~ii~~s~~ 150 (394)
T 3okp_A 126 ----------------------------------M------------------LPGSRQS---LRKIGTEVDVLTYISQY 150 (394)
T ss_dssp ----------------------------------T------------------SHHHHHH---HHHHHHHCSEEEESCHH
T ss_pred ----------------------------------h------------------cchhhHH---HHHHHHhCCEEEEcCHH
Confidence 0 0000000 11223677888888844
Q ss_pred HhhHHHHHHHhhh--CCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecccc-ccCH
Q 010825 241 ALEQQVLNALSFI--FPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSII-IMNK 317 (500)
Q Consensus 241 ~le~~~~~~~~~~--~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~-~~~~ 317 (500)
..+ .+... .+.++..|..-.... ...........++.+-+.-. ++..+++..|+.. .-+.
T Consensus 151 ~~~-----~~~~~~~~~~~~~vi~ngv~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 151 TLR-----RFKSAFGSHPTFEHLPSGVDVK-----------RFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp HHH-----HHHHHHCSSSEEEECCCCBCTT-----------TSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCH
T ss_pred HHH-----HHHHhcCCCCCeEEecCCcCHH-----------HcCCCCchhhHHHHHhcCCC-cCceEEEEEeccccccCH
Confidence 322 22221 122455554322111 00000001122333333322 2335777788864 2333
Q ss_pred HHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchHHHH---HhhcCceeeeccchh---HhhccCCcceeEe-----
Q 010825 318 QQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFIASWCPQE---EVLNHPAIGGFFT----- 384 (500)
Q Consensus 318 ~~~~~l~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~nv~~~~~~pq~---~lL~~~~~~~~I~----- 384 (500)
+.+...+..+... +.++++ ++.+. ..+.+.+ ...+++.+.+|+|+. ++|..+++ +|.
T Consensus 214 ~~li~a~~~l~~~~~~~~l~i-~G~g~-------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~ 283 (394)
T 3okp_A 214 DSLIKAMPQVIAARPDAQLLI-VGSGR-------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTR 283 (394)
T ss_dssp HHHHHHHHHHHHHSTTCEEEE-ECCCT-------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCB
T ss_pred HHHHHHHHHHHhhCCCeEEEE-EcCch-------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccc
Confidence 3333333333332 344444 34322 2222222 234789999999754 47889998 776
Q ss_pred ------ecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCChh-HHH
Q 010825 385 ------HSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEKG-KQM 457 (500)
Q Consensus 385 ------HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~-~~~ 457 (500)
-|.-+++.||+++|+|+|+.+. ......+ + .|.|..+ + .-+.+++.++|.++++|++- +++
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~-~~~g~~~-----~-~~d~~~l~~~i~~l~~~~~~~~~~ 351 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIAGTS----GGAPETV-T-PATGLVV-----E-GSDVDKLSELLIELLDDPIRRAAM 351 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEECSS----TTGGGGC-C-TTTEEEC-----C-TTCHHHHHHHHHHHHTCHHHHHHH
T ss_pred cccccccccCcHHHHHHHcCCCEEEeCC----CChHHHH-h-cCCceEe-----C-CCCHHHHHHHHHHHHhCHHHHHHH
Confidence 5556799999999999999664 3344444 3 3477777 3 24799999999999998761 233
Q ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 458 RNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 458 ~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
.+++++. +++ .-+.+..++++++.+.+.
T Consensus 352 ~~~~~~~---~~~----~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 352 GAAGRAH---VEA----EWSWEIMGERLTNILQSE 379 (394)
T ss_dssp HHHHHHH---HHH----HTBHHHHHHHHHHHHHSC
T ss_pred HHHHHHH---HHH----hCCHHHHHHHHHHHHHHh
Confidence 3333332 222 134456666666666544
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.35 E-value=1.7e-09 Score=109.42 Aligned_cols=117 Identities=19% Similarity=0.138 Sum_probs=81.6
Q ss_pred hcCceeeeccch---hHhhccCCcceeEeec----CchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCC
Q 010825 359 KEKGFIASWCPQ---EEVLNHPAIGGFFTHS----GWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGG 431 (500)
Q Consensus 359 ~~nv~~~~~~pq---~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~ 431 (500)
.++|.+.+|+|+ ..+|..+++ +|.-. .-+++.||+++|+|+|+.+. ......+ +..+.|..+
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~---- 373 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLV---- 373 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEE----
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEEC----
Confidence 368999999986 468899998 66543 34589999999999999653 4455555 555678887
Q ss_pred CCCCcCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhcC
Q 010825 432 DDNRVSRNEVEKQVRELMGGEK-GKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLSE 493 (500)
Q Consensus 432 ~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 493 (500)
+ .-+.+++.++|.++++|++ .+++.+++++..+.+.- ......+.++++.+....
T Consensus 374 -~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 374 -D-GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW-----AATAAQLSSLYNDAIANE 429 (438)
T ss_dssp -S-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTC
T ss_pred -C-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHhhhc
Confidence 4 2478999999999999876 24556666666555432 223455566666665554
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.32 E-value=3.6e-10 Score=112.06 Aligned_cols=129 Identities=14% Similarity=0.147 Sum_probs=83.7
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchHHHHHh--hcCceeeeccch---h
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNS-----NHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFIASWCPQ---E 371 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq---~ 371 (500)
+++|+++.|...... .+..++++++.. +.++++..+.+.. +.+.+.+.. .++|.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~------~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV------VREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH------HHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457778888653221 234455555432 3444444342210 111222211 247888865554 5
Q ss_pred HhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCC
Q 010825 372 EVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGG 451 (500)
Q Consensus 372 ~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~ 451 (500)
++|+.+++ ||+.+| |.+.||+++|+|+|+.+...+++.. + +.|.|+.+ . .++++|.++|.++++|
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv-----~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLA-----G--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEEC-----C--SCHHHHHHHHHHHHTC
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEEC-----C--CCHHHHHHHHHHHHhC
Confidence 79999999 999884 4466999999999999877776662 3 36888877 4 3899999999999998
Q ss_pred Ch
Q 010825 452 EK 453 (500)
Q Consensus 452 ~~ 453 (500)
++
T Consensus 335 ~~ 336 (376)
T 1v4v_A 335 PE 336 (376)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.29 E-value=7.3e-10 Score=110.07 Aligned_cols=130 Identities=13% Similarity=0.155 Sum_probs=84.5
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchHHHHHh--hcCceeeeccch---h
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNS-----NHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFIASWCPQ---E 371 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq---~ 371 (500)
+++|+++.|....... .+..+++++... +.++++..+.+. . ..+.+.+.. .++|.+.+++++ .
T Consensus 205 ~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~--~----~~~~l~~~~~~~~~v~~~g~~~~~~~~ 277 (384)
T 1vgv_A 205 KKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP--N----VREPVNRILGHVKNVILIDPQEYLPFV 277 (384)
T ss_dssp SEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH--H----HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH--H----HHHHHHHHhhcCCCEEEeCCCCHHHHH
Confidence 4678888887653322 344455555432 334444323110 0 111122211 257888766664 5
Q ss_pred HhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCC
Q 010825 372 EVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGG 451 (500)
Q Consensus 372 ~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~ 451 (500)
++|+.+++ ||+.+|. .+.||+++|+|+|+.+..++... ++ +.|.|+.+ +. ++++|.++|.++++|
T Consensus 278 ~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v-~~g~g~lv-----~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 278 WLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AV-TAGTVRLV-----GT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HH-HHTSEEEE-----CS--SHHHHHHHHHHHHHC
T ss_pred HHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hh-hCCceEEe-----CC--CHHHHHHHHHHHHhC
Confidence 68999999 9998864 48899999999999987544332 32 46899888 55 899999999999998
Q ss_pred Ch
Q 010825 452 EK 453 (500)
Q Consensus 452 ~~ 453 (500)
++
T Consensus 343 ~~ 344 (384)
T 1vgv_A 343 EN 344 (384)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.27 E-value=9.4e-09 Score=103.69 Aligned_cols=393 Identities=12% Similarity=0.039 Sum_probs=193.5
Q ss_pred CCcEEEEEcCC-----CcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh---------hcC-CCCCCCCCCeeEEeC
Q 010825 9 SKVHAVCIPSP-----SQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK---------SRG-EHSLGGLPSFRFEAI 73 (500)
Q Consensus 9 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~---------~~~-~~~~~~~~~~~f~~l 73 (500)
++|||++++.. ..|--.-+..|++.|+++||+|+++++......-.. ... ........++.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46899999843 345666789999999999999999996432210000 000 000001235666666
Q ss_pred CCCCCCCCCCCCccc-cHHHHHHHHHHhccchHHHHHHHHh--hcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeE
Q 010825 74 PDGLPASSDESSTTQ-DMYSLCESIMNNVMLHPFLDLLAKL--NDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIV 148 (500)
Q Consensus 74 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~~l--~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v 148 (500)
+...-.. ..... ....+...+... ...+..+++.+ ... +||+|.+..... .+..+++..|+|+|
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~Dii~~~~~~~~~~~~~~~~~~~~~~v 149 (439)
T 3fro_A 81 GGGLLDS---EDVYGPGWDGLIRKAVTF--GRASVLLLNDLLREEP------LPDVVHFHDWHTVFAGALIKKYFKIPAV 149 (439)
T ss_dssp ESGGGGC---SSTTCSHHHHHHHHHHHH--HHHHHHHHHHHTTTSC------CCSEEEEESGGGHHHHHHHHHHHCCCEE
T ss_pred cchhccc---cccccCCcchhhhhhHHH--HHHHHHHHHHHhccCC------CCeEEEecchhhhhhHHHHhhccCCCEE
Confidence 5311000 00111 111111111111 12233444444 122 999999886444 35667788999999
Q ss_pred EEeccchhHHHHHhhhhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhcc
Q 010825 149 LLFTISACSFMGFKQFRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENA 228 (500)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (500)
...+............. ...+... ..... . .. .....
T Consensus 150 ~~~h~~~~~~~~~~~~~---------------------------~~~~~~~-----~~~~~----~-~~------~~~~~ 186 (439)
T 3fro_A 150 FTIHRLNKSKLPAFYFH---------------------------EAGLSEL-----APYPD----I-DP------EHTGG 186 (439)
T ss_dssp EEESCCCCCCEEHHHHH---------------------------HTTCGGG-----CCSSE----E-CH------HHHHH
T ss_pred EEecccccccCchHHhC---------------------------ccccccc-----cccce----e-eH------hhhhh
Confidence 87554321100000000 0000000 00000 0 00 11223
Q ss_pred ccCcEEEEcChHHhhHHHHHHHhhhCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEe
Q 010825 229 SKASAIIIHTFDALEQQVLNALSFIFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVN 308 (500)
Q Consensus 229 ~~~~~~l~ns~~~le~~~~~~~~~~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs 308 (500)
+.++.+++.|....+. ..... +..+.++..|..-.....-.+. ..+....+....+.+-+.-. ++ .+++.
T Consensus 187 ~~ad~ii~~S~~~~~~-~~~~~-~~~~~~i~vi~ngvd~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~-~~i~~ 256 (439)
T 3fro_A 187 YIADIVTTVSRGYLID-EWGFF-RNFEGKITYVFNGIDCSFWNES------YLTGSRDERKKSLLSKFGMD-EG-VTFMF 256 (439)
T ss_dssp HHCSEEEESCHHHHHH-THHHH-GGGTTSEEECCCCCCTTTSCGG------GSCSCHHHHHHHHHHHHTCC-SC-EEEEE
T ss_pred hhccEEEecCHHHHHH-Hhhhh-hhcCCceeecCCCCCchhcCcc------cccchhhhhHHHHHHHcCCC-CC-cEEEE
Confidence 5678888888554333 11111 1122245544432211100000 00000011223334444332 23 67778
Q ss_pred ecccc--ccCHHHHHHHHHHHHhCC--CCEE-EEEcCCCCCCCCCCCchH---HHHHhhcCceeeeccchh---HhhccC
Q 010825 309 FGSII--IMNKQQLIEVAMGLVNSN--HPFL-WIIRPDLVTGETADLPAE---FEVKAKEKGFIASWCPQE---EVLNHP 377 (500)
Q Consensus 309 ~Gs~~--~~~~~~~~~l~~al~~~~--~~~v-~~~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~pq~---~lL~~~ 377 (500)
.|+.. .-+.+.+...+..+.... .++- .+++.+... ..+. ..++.+.++.+.+|+|+. ++|..+
T Consensus 257 ~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~-----~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 331 (439)
T 3fro_A 257 IGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE-----LEGWARSLEEKHGNVKVITEMLSREFVRELYGSV 331 (439)
T ss_dssp ECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHH-----HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTC
T ss_pred EcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChh-----HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHC
Confidence 88875 234444444444444422 2332 333332100 0011 122234455678989985 478899
Q ss_pred CcceeEee----cCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC-CC
Q 010825 378 AIGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMG-GE 452 (500)
Q Consensus 378 ~~~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~-~~ 452 (500)
++ +|.= |--+++.||+++|+|+|+.. .......+ + .|.|..+ + .-+.+++.++|.++++ |+
T Consensus 332 dv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~-~-~~~g~~~-----~-~~d~~~la~~i~~ll~~~~ 397 (439)
T 3fro_A 332 DF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-T-NETGILV-----K-AGDPGELANAILKALELSR 397 (439)
T ss_dssp SE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC-C-TTTCEEE-----C-TTCHHHHHHHHHHHHHHTT
T ss_pred CE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE-E-cCceEEe-----C-CCCHHHHHHHHHHHHhcCH
Confidence 98 6632 33469999999999999964 34455555 4 4688888 4 3578999999999998 76
Q ss_pred h-hHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 453 K-GKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 453 ~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
+ .+++.+++++..+. -+-+..++++++.+.+.
T Consensus 398 ~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 398 SDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp TTTHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhh--------CcHHHHHHHHHHHHHHH
Confidence 5 23444444443322 45566677777666554
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.23 E-value=1.3e-08 Score=101.58 Aligned_cols=128 Identities=9% Similarity=0.093 Sum_probs=82.7
Q ss_pred eEEEeeccc-c-ccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchHHHHH---hhcCceeeeccchh---Hh
Q 010825 304 VIYVNFGSI-I-IMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVK---AKEKGFIASWCPQE---EV 373 (500)
Q Consensus 304 vV~vs~Gs~-~-~~~~~~~~~l~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~nv~~~~~~pq~---~l 373 (500)
.+++..|+. . .-+.+.+...+..+.+. +.++ .+++.+. . +.+.+. ..+++.+.+++|+. ++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~~~-------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 279 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRGD-------E-DELREQAGDLAGHLRFLGQVDDATKASA 279 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE-EEESCSC-------H-HHHHHHTGGGGGGEEECCSCCHHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE-EEEcCCc-------H-HHHHHHHHhccCcEEEEecCCHHHHHHH
Confidence 467777877 4 23333333333334332 3333 3344322 1 223222 25689999999974 79
Q ss_pred hccCCcceeEe----ecCch-hHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHH
Q 010825 374 LNHPAIGGFFT----HSGWN-STIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVREL 448 (500)
Q Consensus 374 L~~~~~~~~I~----HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 448 (500)
|..+++ +|. +.|++ ++.||+++|+|+|+.+. ......+ +..+.|..+ + .-+.+++.++|.++
T Consensus 280 ~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~-----~-~~d~~~l~~~i~~l 346 (406)
T 2gek_A 280 MRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLV-----P-VDDADGMAAALIGI 346 (406)
T ss_dssp HHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEEC-----C-TTCHHHHHHHHHHH
T ss_pred HHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEe-----C-CCCHHHHHHHHHHH
Confidence 999999 663 33444 89999999999999755 4555556 545677777 4 25789999999999
Q ss_pred hCCCh
Q 010825 449 MGGEK 453 (500)
Q Consensus 449 l~~~~ 453 (500)
++|++
T Consensus 347 ~~~~~ 351 (406)
T 2gek_A 347 LEDDQ 351 (406)
T ss_dssp HHCHH
T ss_pred HcCHH
Confidence 99875
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.19 E-value=7.3e-08 Score=95.95 Aligned_cols=350 Identities=11% Similarity=0.061 Sum_probs=178.1
Q ss_pred CcEEEEEcCCCc-CcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccc
Q 010825 10 KVHAVCIPSPSQ-SHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQ 88 (500)
Q Consensus 10 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 88 (500)
+.++....+|.. |.-.....|++.|+++||+|++++....... . ...+++.+..++...... .. ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~--------~~~~~i~~~~~~~~~~~~---~~-~~ 81 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-N--------KVYPNIYFHEVTVNQYSV---FQ-YP 81 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------------CCCTTEEEECCCCC-------CC-SC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-c--------ccCCceEEEecccccccc---cc-cc
Confidence 567888877765 4777888999999999999999998543211 0 112356665554211010 00 00
Q ss_pred cHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh---CCCeEEEeccchhHHHHHhh
Q 010825 89 DMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL---GLPIVLLFTISACSFMGFKQ 163 (500)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l---giP~v~~~~~~~~~~~~~~~ 163 (500)
.. .+.. ...+.+++++. +||+|++..... ....++.++ ++|+|..........
T Consensus 82 ~~--~~~~------~~~l~~~l~~~---------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----- 139 (394)
T 2jjm_A 82 PY--DLAL------ASKMAEVAQRE---------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV----- 139 (394)
T ss_dssp CH--HHHH------HHHHHHHHHHH---------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-----
T ss_pred cc--cHHH------HHHHHHHHHHc---------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-----
Confidence 00 0111 12233455554 999999975433 233344443 599887643311000
Q ss_pred hhhhhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhh
Q 010825 164 FRTFKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALE 243 (500)
Q Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le 243 (500)
.. ... . ..... ....+.++.+++.|....
T Consensus 140 -----------------------------~~-~~~-----~---------~~~~~------~~~~~~ad~ii~~s~~~~- 168 (394)
T 2jjm_A 140 -----------------------------LG-SDP-----S---------LNNLI------RFGIEQSDVVTAVSHSLI- 168 (394)
T ss_dssp -----------------------------TT-TCT-----T---------THHHH------HHHHHHSSEEEESCHHHH-
T ss_pred -----------------------------cC-CCH-----H---------HHHHH------HHHHhhCCEEEECCHHHH-
Confidence 00 000 0 00011 112356888888884332
Q ss_pred HHHHHHHhhhC--CCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeecccc-ccCHHHH
Q 010825 244 QQVLNALSFIF--PLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSII-IMNKQQL 320 (500)
Q Consensus 244 ~~~~~~~~~~~--p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~-~~~~~~~ 320 (500)
+...... +.++..|..-.... ..... ...++.+-+... ++..+++..|... .-..+.+
T Consensus 169 ----~~~~~~~~~~~~~~vi~ngv~~~-----------~~~~~---~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~l 229 (394)
T 2jjm_A 169 ----NETHELVKPNKDIQTVYNFIDER-----------VYFKR---DMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDV 229 (394)
T ss_dssp ----HHHHHHTCCSSCEEECCCCCCTT-----------TCCCC---CCHHHHHHTTCC----CEEEEECCCCGGGTHHHH
T ss_pred ----HHHHHhhCCcccEEEecCCccHH-----------hcCCc---chHHHHHHcCCC-CCCeEEEEeeccccccCHHHH
Confidence 2223322 22455554332111 00000 112222223211 2234666778874 2333333
Q ss_pred HHHHHHHHh-CCCCEEEEEcCCCCCCCCCCCchHHHHHh-----hcCceeeeccch-hHhhccCCcceeE----eecCch
Q 010825 321 IEVAMGLVN-SNHPFLWIIRPDLVTGETADLPAEFEVKA-----KEKGFIASWCPQ-EEVLNHPAIGGFF----THSGWN 389 (500)
Q Consensus 321 ~~l~~al~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~nv~~~~~~pq-~~lL~~~~~~~~I----~HgG~~ 389 (500)
...+..+.. .+.++ ++++.+. ..+.+.+.. .++|.+.++..+ ..+|..+++ +| .-|.-+
T Consensus 230 i~a~~~l~~~~~~~l-~i~G~g~-------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~ 299 (394)
T 2jjm_A 230 VQAFAKIVTEVDAKL-LLVGDGP-------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGL 299 (394)
T ss_dssp HHHHHHHHHSSCCEE-EEECCCT-------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCH
T ss_pred HHHHHHHHhhCCCEE-EEECCch-------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCch
Confidence 333333332 23443 3444332 112222221 468888887654 579999998 77 456667
Q ss_pred hHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHH
Q 010825 390 STIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEK-GKQMRNKASKWKRFA 468 (500)
Q Consensus 390 s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~ 468 (500)
++.||+++|+|+|+.+.. .....+ +..+.|..+ + .-+.+++.++|.++++|++ .+++.+++++. +
T Consensus 300 ~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~~-----~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~---~ 365 (394)
T 2jjm_A 300 VLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYLC-----E-VGDTTGVADQAIQLLKDEELHRNMGERARES---V 365 (394)
T ss_dssp HHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEEE-----C-TTCHHHHHHHHHHHHHCHHHHHHHHHHHHHH---H
T ss_pred HHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEEe-----C-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH---H
Confidence 999999999999997642 333344 444677777 4 2478999999999999875 12333333332 2
Q ss_pred HHHhCCCCChHHHHHHHHHHHHhc
Q 010825 469 EEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 469 ~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
.+ .-+.+..++++++.+.+.
T Consensus 366 ~~----~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 366 YE----QFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp HH----HSCHHHHHHHHHHHHHHT
T ss_pred HH----hCCHHHHHHHHHHHHHHH
Confidence 12 134455555555555443
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.17 E-value=1.5e-08 Score=104.46 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=65.9
Q ss_pred hcCceeeeccchh---HhhccC----CcceeEee---cC-chhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEe
Q 010825 359 KEKGFIASWCPQE---EVLNHP----AIGGFFTH---SG-WNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 359 ~~nv~~~~~~pq~---~lL~~~----~~~~~I~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~ 427 (500)
.++|.+.+++|+. .+|..+ ++ +|.- -| -.++.||+++|+|+|+... ......+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 3578999999764 578899 88 6632 23 4589999999999999653 3444555 444478888
Q ss_pred eeCCCCCCcCHHHHHHHHHHHhCCCh-hHHHHHHHHHH
Q 010825 428 INGGDDNRVSRNEVEKQVRELMGGEK-GKQMRNKASKW 464 (500)
Q Consensus 428 ~~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l 464 (500)
+. -+.+++.++|.++++|++ .+++.+++++.
T Consensus 407 -----~~-~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 438 (499)
T 2r60_A 407 -----DP-EDPEDIARGLLKAFESEETWSAYQEKGKQR 438 (499)
T ss_dssp -----CT-TCHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred -----CC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 43 578999999999999876 12344444443
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.15 E-value=1.2e-08 Score=100.79 Aligned_cols=132 Identities=11% Similarity=0.072 Sum_probs=82.3
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCCCCCchHHHHHhh--cCceeeeccch---hHh
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNS---NHPFLWIIRPDLVTGETADLPAEFEVKAK--EKGFIASWCPQ---EEV 373 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~nv~~~~~~pq---~~l 373 (500)
+++|+++.|...... ..+..+++++... ..++.++++.+.... +.+...+... ++|.+.+++++ ..+
T Consensus 205 ~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~----~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 279 (375)
T 3beo_A 205 NRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMNPV----VRETANDILGDYGRIHLIEPLDVIDFHNV 279 (375)
T ss_dssp SEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSCHH----HHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCCHH----HHHHHHHHhhccCCEEEeCCCCHHHHHHH
Confidence 456777888764322 2345566665432 112333333221000 1111222223 58888777765 468
Q ss_pred hccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCCh
Q 010825 374 LNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 374 L~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~ 453 (500)
|+.+++ ||+.+| +.+.||+++|+|+|+.+.....+. .+ +.|.|..+ +. ++++|.++|.++++|++
T Consensus 280 ~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e---~v--~~g~g~~v-----~~--d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 280 AARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE---GI--EAGTLKLA-----GT--DEETIFSLADELLSDKE 344 (375)
T ss_dssp HHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH---HH--HTTSEEEC-----CS--CHHHHHHHHHHHHHCHH
T ss_pred HHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce---ee--cCCceEEc-----CC--CHHHHHHHHHHHHhChH
Confidence 899998 998874 458899999999999854333322 23 36888888 53 89999999999999875
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.12 E-value=2.1e-07 Score=91.68 Aligned_cols=142 Identities=15% Similarity=0.231 Sum_probs=93.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCC----CE-EEEEcCCCCCCCCCCCchHHHH---Hh--hcCceeeeccch-h
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNH----PF-LWIIRPDLVTGETADLPAEFEV---KA--KEKGFIASWCPQ-E 371 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~----~~-v~~~~~~~~~~~~~~~~~~~~~---~~--~~nv~~~~~~pq-~ 371 (500)
..+++..|+... ......+++++..... ++ ++.++.+. .+.+.+ +. .+++.+.++..+ .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------PRKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------CHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------HHHHHHHHHHcCCCCcEEECCCcccHH
Confidence 457777887642 2334556667766532 22 34444322 122222 22 468888888665 5
Q ss_pred HhhccCCcceeEe----ecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHH
Q 010825 372 EVLNHPAIGGFFT----HSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRE 447 (500)
Q Consensus 372 ~lL~~~~~~~~I~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~ 447 (500)
.+|..+++ +|. -|.-+++.||+++|+|+|+.+. ..+...+ +..+.|..+ +..-+.+++.++|.+
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~-----~~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVI-----AEPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEE-----CSSCCHHHHHHHHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEe-----CCCCCHHHHHHHHHH
Confidence 69999998 775 4667789999999999999664 3455666 567889998 545689999999999
Q ss_pred HhCCCh-hHHHHHHHHHHHH
Q 010825 448 LMGGEK-GKQMRNKASKWKR 466 (500)
Q Consensus 448 vl~~~~-~~~~~~~a~~l~~ 466 (500)
+++|++ .+.+.+++++..+
T Consensus 334 l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 334 ALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHHCHHHHHHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHHHHH
Confidence 999876 1234444444433
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.11 E-value=7.7e-09 Score=102.52 Aligned_cols=316 Identities=13% Similarity=0.066 Sum_probs=169.0
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh-hhhhhcCCCCCCCCCCeeEEeCCC-CCCCCCCCCCccc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR-RFLKSRGEHSLGGLPSFRFEAIPD-GLPASSDESSTTQ 88 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~v~~~~~~~~~~~~~~~~f~~l~~-~~~~~~~~~~~~~ 88 (500)
+|++++. |++-.+.=+.+|.++|.++ +++.++.+....+ .+.+... .++.+ .-|+ .+... ..
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~-------~~~~i-~~~~~~l~~~------~~ 73 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF-------DDMGI-RKPDYFLEVA------AD 73 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH-------C-CCC-CCCSEECCCC------CC
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH-------hhCCC-CCCceecCCC------CC
Confidence 4666654 8888888899999999887 9988887765443 2322100 01221 0111 01111 11
Q ss_pred cHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcC--CcchHHHHHHHhCCCeEEEeccchhHHHHHhhhhh
Q 010825 89 DMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDG--FLPFTVTAAQQLGLPIVLLFTISACSFMGFKQFRT 166 (500)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 166 (500)
+........ ...+.+++++. +||+||+-. .+.++..+|.++|||++.+...
T Consensus 74 ~~~~~~~~~-----~~~l~~~l~~~---------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------- 126 (385)
T 4hwg_A 74 NTAKSIGLV-----IEKVDEVLEKE---------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------- 126 (385)
T ss_dssp CSHHHHHHH-----HHHHHHHHHHH---------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------
T ss_pred CHHHHHHHH-----HHHHHHHHHhc---------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------
Confidence 222222222 23445666666 999999733 3334478899999997654211
Q ss_pred hhhcCCCCCCCccchhhhhcccccccCCCCCCCCcCCCCcccccCCchhhHHHHHHHHHhccccCcEEEEcChHHhhHHH
Q 010825 167 FKEKGLFPVDDKSCLTKEYLSRLIDWIPGMKDIRIRDLPSFVRSTDSKDIMFNLCVEATENASKASAIIIHTFDALEQQV 246 (500)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 246 (500)
+.... ..++ ......... +.++++++.+-. .
T Consensus 127 -----------------------------lrs~~-~~~p--------ee~nR~~~~------~~a~~~~~~te~-----~ 157 (385)
T 4hwg_A 127 -----------------------------NRCFD-QRVP--------EEINRKIID------HISDVNITLTEH-----A 157 (385)
T ss_dssp -----------------------------CCCSC-TTST--------HHHHHHHHH------HHCSEEEESSHH-----H
T ss_pred -----------------------------Ccccc-ccCc--------HHHHHHHHH------hhhceeecCCHH-----H
Confidence 00000 0000 011111111 335667776632 2
Q ss_pred HHHHhh--hCCCcceecCCchhhhhhhhhhcccccccCCCccchhhhhhhhhcCCCCCceEEEeeccccccC-HHHHHHH
Q 010825 247 LNALSF--IFPLQLFTIGPLQLLLNQIEEKDGMLNYIGYNLLKEETECLQWLDSKEPNSVIYVNFGSIIIMN-KQQLIEV 323 (500)
Q Consensus 247 ~~~~~~--~~p~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~-~~~~~~l 323 (500)
.+.+.. ..+.+++.+|-.....-... .. . ....++.+-+.-.+ ++.|+++.|...... .+.+..+
T Consensus 158 ~~~l~~~G~~~~~I~vtGnp~~D~~~~~--------~~-~--~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~l 225 (385)
T 4hwg_A 158 RRYLIAEGLPAELTFKSGSHMPEVLDRF--------MP-K--ILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKEL 225 (385)
T ss_dssp HHHHHHTTCCGGGEEECCCSHHHHHHHH--------HH-H--HHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHH
T ss_pred HHHHHHcCCCcCcEEEECCchHHHHHHh--------hh-h--cchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHH
Confidence 222222 22336888884332211000 00 0 01112333333222 468888888764333 2345566
Q ss_pred HHHHHhC----CCCEEEEEcCCCCCCCCCCCchHHHHH---h--hcCceeeeccc---hhHhhccCCcceeEeecCchhH
Q 010825 324 AMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEVK---A--KEKGFIASWCP---QEEVLNHPAIGGFFTHSGWNST 391 (500)
Q Consensus 324 ~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~---~--~~nv~~~~~~p---q~~lL~~~~~~~~I~HgG~~s~ 391 (500)
++++... +..+|+..... ..+...+. . .+|+.+.+.++ ...+|+++++ +|+-+|. .+
T Consensus 226 l~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~ 294 (385)
T 4hwg_A 226 LNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-IT 294 (385)
T ss_dssp HHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HH
T ss_pred HHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HH
Confidence 6666542 45666655311 11111111 1 24777765554 4579999998 9999886 46
Q ss_pred HHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCCh
Q 010825 392 IESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 392 ~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~ 453 (500)
.||.++|+|+|.++...+.+. .+ +.|.++.+ . .++++|.+++.++++|+.
T Consensus 295 ~EA~alG~Pvv~~~~~ter~e---~v--~~G~~~lv-----~--~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 295 EEASILNLPALNIREAHERPE---GM--DAGTLIMS-----G--FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHHTTCCEEECSSSCSCTH---HH--HHTCCEEC-----C--SSHHHHHHHHHHHHTTCB
T ss_pred HHHHHcCCCEEEcCCCccchh---hh--hcCceEEc-----C--CCHHHHHHHHHHHHhChH
Confidence 999999999999987654332 24 36877666 3 379999999999999875
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=7.5e-09 Score=101.06 Aligned_cols=122 Identities=12% Similarity=0.072 Sum_probs=81.6
Q ss_pred EEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchH---HHHHhhcCceeeeccchh---HhhccCC
Q 010825 305 IYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAE---FEVKAKEKGFIASWCPQE---EVLNHPA 378 (500)
Q Consensus 305 V~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~pq~---~lL~~~~ 378 (500)
+++..|+.. ....+..++++++..+.+++++ +.+. ..+. +.++..++|.+.+|+|+. ++|..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~-------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW-------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC-------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc-------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence 455577764 2233445666666666666554 4322 1122 223345799999999975 6899999
Q ss_pred cceeEe-------------ecC-chhHHHHHhcCCceeeCCcccchhhhHHHhhhh--hcceeEeeeCCCCCCcCHHHHH
Q 010825 379 IGGFFT-------------HSG-WNSTIESLCAGVPMICWPFLGDQPTNCRYTCNE--WGVGLEIINGGDDNRVSRNEVE 442 (500)
Q Consensus 379 ~~~~I~-------------HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~--~G~g~~~~~~~~~~~~~~~~l~ 442 (500)
+ +|. +-| -+++.||+++|+|+|+... ......+ +. -+.|..+ +. +.+++.
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~-----~~--d~~~l~ 299 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT-----DF--APDEAR 299 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS-----CC--CHHHHH
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc-----CC--CHHHHH
Confidence 9 663 233 4589999999999999765 3455555 44 3567766 44 999999
Q ss_pred HHHHHHhC
Q 010825 443 KQVRELMG 450 (500)
Q Consensus 443 ~~i~~vl~ 450 (500)
++|.++++
T Consensus 300 ~~i~~l~~ 307 (342)
T 2iuy_A 300 RTLAGLPA 307 (342)
T ss_dssp HHHHTSCC
T ss_pred HHHHHHHH
Confidence 99999987
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.90 E-value=1.9e-07 Score=93.68 Aligned_cols=109 Identities=14% Similarity=0.054 Sum_probs=74.1
Q ss_pred cCceeeeccc---h---hHhhccCCcceeEeec----CchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeee
Q 010825 360 EKGFIASWCP---Q---EEVLNHPAIGGFFTHS----GWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIIN 429 (500)
Q Consensus 360 ~nv~~~~~~p---q---~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~ 429 (500)
++|.+.+|++ + ..+|+.+++ +|.-+ .-+++.||+++|+|+|+.+. ..+...+ +..+.|..+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE--
Confidence 6889998876 2 358889998 77544 45689999999999999664 4455555 555688888
Q ss_pred CCCCCCcCHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 010825 430 GGDDNRVSRNEVEKQVRELMGGEKG-KQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVL 490 (500)
Q Consensus 430 ~~~~~~~~~~~l~~~i~~vl~~~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~ 490 (500)
+ +.+++.++|.++++|+.. +++.+++++ .+.+ .-+.+..++++++.+.
T Consensus 364 ---~---d~~~la~~i~~ll~~~~~~~~~~~~a~~---~~~~----~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 364 ---R---DANEAVEVVLYLLKHPEVSKEMGAKAKE---RVRK----NFIITKHMERYLDILN 412 (416)
T ss_dssp ---S---SHHHHHHHHHHHHHCHHHHHHHHHHHHH---HHHH----HTBHHHHHHHHHHHHH
T ss_pred ---C---CHHHHHHHHHHHHhCHHHHHHHHHHHHH---HHHH----HcCHHHHHHHHHHHHH
Confidence 5 899999999999998761 223333333 2222 1344555555555544
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.65 E-value=2.4e-05 Score=79.95 Aligned_cols=161 Identities=7% Similarity=0.019 Sum_probs=92.4
Q ss_pred eEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHH---HHHhhcCce-eeeccchh--Hhhcc
Q 010825 304 VIYVNFGSII-IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGF-IASWCPQE--EVLNH 376 (500)
Q Consensus 304 vV~vs~Gs~~-~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~nv~-~~~~~pq~--~lL~~ 376 (500)
.+++..|... .-+.+.+...+..+.+.+.+++++-.++.. ..+.+ .++.++++. +.++.... .+|..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA------LEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHH------HHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchH------HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhc
Confidence 3777788875 223333333333333335555554332100 01122 222346786 67883332 68999
Q ss_pred CCcceeEee----cCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhh---------cceeEeeeCCCCCCcCHHHHHH
Q 010825 377 PAIGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEW---------GVGLEIINGGDDNRVSRNEVEK 443 (500)
Q Consensus 377 ~~~~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------G~g~~~~~~~~~~~~~~~~l~~ 443 (500)
+++ +|.- |.-.++.||+++|+|+|+... ......+ +.- +.|..+ + .-+.+++.+
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-----~-~~d~~~la~ 432 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-----S-PVTLDGLKQ 432 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-----S-SCSHHHHHH
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-----C-CCCHHHHHH
Confidence 998 6632 334689999999999999654 3444445 433 578877 4 357899999
Q ss_pred HHHHHh---CCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 444 QVRELM---GGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 444 ~i~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
+|.+++ +|++ .++ ++++..++ +.-+-+..++++++.+.+.
T Consensus 433 ~i~~ll~~~~~~~---~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 433 AIRRTVRYYHDPK---LWT---QMQKLGMK---SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHHHHTCHH---HHH---HHHHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHH---HHH---HHHHHHHH---HhCChHHHHHHHHHHHHHh
Confidence 999999 6654 332 22222222 3455566666666655443
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.59 E-value=2e-06 Score=92.49 Aligned_cols=81 Identities=11% Similarity=0.109 Sum_probs=56.7
Q ss_pred cCceeee----ccchhHhhc----cCCcceeEee----cCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEe
Q 010825 360 EKGFIAS----WCPQEEVLN----HPAIGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 360 ~nv~~~~----~~pq~~lL~----~~~~~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~ 427 (500)
++|.+.+ ++|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |.......+ +.-..|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEe
Confidence 6788887 455555544 4567 6642 3345899999999999995 444555555 455678888
Q ss_pred eeCCCCCCcCHHHHHHHHHHHh----CCCh
Q 010825 428 INGGDDNRVSRNEVEKQVRELM----GGEK 453 (500)
Q Consensus 428 ~~~~~~~~~~~~~l~~~i~~vl----~~~~ 453 (500)
+. -+.+++.++|.+++ .|++
T Consensus 713 -----~p-~D~e~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 713 -----DP-YHGDQAADTLADFFTKCKEDPS 736 (816)
T ss_dssp -----CT-TSHHHHHHHHHHHHHHHHHCTH
T ss_pred -----CC-CCHHHHHHHHHHHHHHhccCHH
Confidence 43 57899999997776 7775
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.56 E-value=6.7e-05 Score=78.25 Aligned_cols=84 Identities=11% Similarity=0.130 Sum_probs=62.0
Q ss_pred cCceeeeccchh---HhhccCCcceeEe---ecCchhHHHHHhcCCceeeCCcccchhh-hHHHhhhhhcceeEeeeCCC
Q 010825 360 EKGFIASWCPQE---EVLNHPAIGGFFT---HSGWNSTIESLCAGVPMICWPFLGDQPT-NCRYTCNEWGVGLEIINGGD 432 (500)
Q Consensus 360 ~nv~~~~~~pq~---~lL~~~~~~~~I~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~-na~~~~~~~G~g~~~~~~~~ 432 (500)
++|.+.+++|+. .+|..+|+ ||. .|+.+++.||+++|+|+|++|-..-.-. .+..+ ...|+...+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v----- 505 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN----- 505 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB-----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh-----
Confidence 689999999853 57899998 662 2667789999999999999764311111 13344 456777666
Q ss_pred CCCcCHHHHHHHHHHHhCCCh
Q 010825 433 DNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 433 ~~~~~~~~l~~~i~~vl~~~~ 453 (500)
.. +.+++.++|.++++|+.
T Consensus 506 ~~--~~~~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 506 VA--DDAAFVAKAVALASDPA 524 (568)
T ss_dssp CS--SHHHHHHHHHHHHHCHH
T ss_pred cC--CHHHHHHHHHHHhcCHH
Confidence 33 89999999999999876
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.56 E-value=4.4e-05 Score=77.96 Aligned_cols=162 Identities=9% Similarity=0.042 Sum_probs=92.1
Q ss_pred ceEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHH---HHHhhcCce-eeeccch--hHhhc
Q 010825 303 SVIYVNFGSII-IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGF-IASWCPQ--EEVLN 375 (500)
Q Consensus 303 ~vV~vs~Gs~~-~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~nv~-~~~~~pq--~~lL~ 375 (500)
..+++..|... .-+.+.+...+..+.+.+.+++++-.+... ..+.+ .++.++++. +.++.+. ..+|.
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV------LQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMG 365 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHH------HHHHHHHHHHHSTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchH------HHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHH
Confidence 35677778764 233333333333333335555544332100 01122 222345775 6788433 36899
Q ss_pred cCCcceeEee----cCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhh---------cceeEeeeCCCCCCcCHHHHH
Q 010825 376 HPAIGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEW---------GVGLEIINGGDDNRVSRNEVE 442 (500)
Q Consensus 376 ~~~~~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------G~g~~~~~~~~~~~~~~~~l~ 442 (500)
.+++ +|.- |.-.++.||+++|+|+|+... ......+ +.- +.|..+ + .-+.+++.
T Consensus 366 ~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-----~-~~d~~~la 432 (485)
T 2qzs_A 366 GADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVF-----E-DSNAWSLL 432 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-----C-SSSHHHHH
T ss_pred hCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEE-----C-CCCHHHHH
Confidence 9998 6632 334578999999999999654 3444445 433 578877 4 35789999
Q ss_pred HHHHHHh---CCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 443 KQVRELM---GGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 443 ~~i~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
++|.+++ +|++ .+++ +++..++ +.-+-+..++++++.+.+.
T Consensus 433 ~~i~~ll~~~~~~~---~~~~---~~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 433 RAIRRAFVLWSRPS---LWRF---VQRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHHHHHTSHH---HHHH---HHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHH---HHHH---HHHHHHh---hcCCHHHHHHHHHHHHHHh
Confidence 9999999 5654 3322 2222222 3455566666666655443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.43 E-value=6.6e-05 Score=74.79 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=53.7
Q ss_pred ceeeeccchh---HhhccCCcceeEe----ecCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcc-----------
Q 010825 362 GFIASWCPQE---EVLNHPAIGGFFT----HSGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGV----------- 423 (500)
Q Consensus 362 v~~~~~~pq~---~lL~~~~~~~~I~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~----------- 423 (500)
+.+.+|+|+. ++|..+++ +|. -|.-.++.||+++|+|+|+... ......+ + .|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~-~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-S-GDCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-C-TTTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-c-cCcccccccccccc
Confidence 5667999953 57889998 663 2334589999999999999553 3333334 2 222
Q ss_pred -----ee--EeeeCCCCCCcCHHHHHHHHHHHhCCCh
Q 010825 424 -----GL--EIINGGDDNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 424 -----g~--~~~~~~~~~~~~~~~l~~~i~~vl~~~~ 453 (500)
|. .+ . .-+.+++.++| ++++|++
T Consensus 328 ~~~~~G~~gl~-----~-~~d~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 328 VDDRDGIGGIE-----G-IIDVDDLVEAF-TFFKDEK 357 (413)
T ss_dssp CTTTCSSCCEE-----E-ECCHHHHHHHH-HHTTSHH
T ss_pred cccccCcceee-----C-CCCHHHHHHHH-HHhcCHH
Confidence 33 44 2 13899999999 9999876
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.32 E-value=4.6e-06 Score=72.86 Aligned_cols=139 Identities=7% Similarity=0.063 Sum_probs=88.5
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHH----HhhcCceeeeccch---hHhhc
Q 010825 304 VIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEV----KAKEKGFIASWCPQ---EEVLN 375 (500)
Q Consensus 304 vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~nv~~~~~~pq---~~lL~ 375 (500)
.+++..|+... ...+..+++++... +.+++++-..... .. +. ...+ .+++|+.+.+|+|+ ..+|.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~-~~---l~-~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKG-DH---AE-RYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTT-ST---HH-HHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccH-HH---HH-HHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 35667787742 23355567777766 4455554332211 10 11 1111 23458999999997 56899
Q ss_pred cCCcceeEe---ecCch-hHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCC
Q 010825 376 HPAIGGFFT---HSGWN-STIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGG 451 (500)
Q Consensus 376 ~~~~~~~I~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~ 451 (500)
.+++ +|. +.|++ ++.||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++.++|.++++|
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-----~--~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-----N--ADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-----C--SCHHHHHHHHHHHHHC
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-----C--CCHHHHHHHHHHHHhC
Confidence 9998 665 33444 99999999999999653 4555555 444566655 1 4789999999999988
Q ss_pred ChhHHHHHHHHHHH
Q 010825 452 EKGKQMRNKASKWK 465 (500)
Q Consensus 452 ~~~~~~~~~a~~l~ 465 (500)
+. .+++++++.+
T Consensus 163 ~~--~~~~~~~~~a 174 (177)
T 2f9f_A 163 PD--KFKKDCFRRA 174 (177)
T ss_dssp TT--TTHHHHHHHH
T ss_pred HH--HHHHHHHHHH
Confidence 76 1355555444
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.24 E-value=0.00049 Score=67.65 Aligned_cols=97 Identities=19% Similarity=0.267 Sum_probs=70.6
Q ss_pred Cceeeeccch-hHhhccCCcceeEee-----cCchhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCC
Q 010825 361 KGFIASWCPQ-EEVLNHPAIGGFFTH-----SGWNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDN 434 (500)
Q Consensus 361 nv~~~~~~pq-~~lL~~~~~~~~I~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~ 434 (500)
++.+.++... ..+|+.+|+ ++.- +|..++.||+++|+|+|.-|...+.+.....+ .+.|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe-------
Confidence 3455555444 568999998 5542 24478999999999999878777777776665 356887777
Q ss_pred CcCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHHH
Q 010825 435 RVSRNEVEKQVRELMGGEK-GKQMRNKASKWKRFAE 469 (500)
Q Consensus 435 ~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~ 469 (500)
-++++|.++|.++++| + .++|.+++++..+.-.
T Consensus 331 -~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 -KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 4789999999999988 5 3457777776665543
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.22 E-value=0.00013 Score=72.80 Aligned_cols=76 Identities=8% Similarity=0.002 Sum_probs=58.2
Q ss_pred hcCceeeeccchh---HhhccCCcceeEe---ecCc-hhHHHHH-------hcCCceeeCCcccchhhhHHHhhhhhcce
Q 010825 359 KEKGFIASWCPQE---EVLNHPAIGGFFT---HSGW-NSTIESL-------CAGVPMICWPFLGDQPTNCRYTCNEWGVG 424 (500)
Q Consensus 359 ~~nv~~~~~~pq~---~lL~~~~~~~~I~---HgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~~~~~~~G~g 424 (500)
.+||.+.+++|+. ++|+.+++ +|. +-|+ +++.||+ ++|+|+|+... + ..-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 4689999999864 57889998 653 3344 5688999 99999999755 4 344567
Q ss_pred eE-eeeCCCCCCcCHHHHHHHHHHHhCCCh
Q 010825 425 LE-IINGGDDNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 425 ~~-~~~~~~~~~~~~~~l~~~i~~vl~~~~ 453 (500)
.. + + .-+.+++.++|.++++|+.
T Consensus 331 ~l~v-----~-~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGY-----T-PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEE-----C-TTCHHHHHHHHHHHHHCCC
T ss_pred EEEe-----C-CCCHHHHHHHHHHHHhCcc
Confidence 77 6 3 2578999999999998764
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.96 E-value=0.0007 Score=67.50 Aligned_cols=81 Identities=12% Similarity=0.025 Sum_probs=58.7
Q ss_pred hcCceeeeccchh---HhhccCCcceeEeec---Cc-hhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCC
Q 010825 359 KEKGFIASWCPQE---EVLNHPAIGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGG 431 (500)
Q Consensus 359 ~~nv~~~~~~pq~---~lL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~ 431 (500)
..+|.+.+++|+. ++++.+++ ||.-+ |. .++.||+++|+|+|+ -..+ ....+ +.-..|+.+
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv---- 361 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL---- 361 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE----
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe----
Confidence 3588999999865 57889998 76422 44 367999999999998 3221 12333 433467777
Q ss_pred CCCCcCHHHHHHHHHHHhCCCh
Q 010825 432 DDNRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 432 ~~~~~~~~~l~~~i~~vl~~~~ 453 (500)
+ .-++++++++|.++++|++
T Consensus 362 -~-~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 362 -E-QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -S-SCSHHHHHHHHHHHHHHTC
T ss_pred -C-CCCHHHHHHHHHHHHcCHH
Confidence 4 3588999999999999876
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.75 E-value=0.00018 Score=61.56 Aligned_cols=139 Identities=12% Similarity=0.136 Sum_probs=82.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCC--CCE-EEEEcCCCCCCCCCCCchHHH---HHhhcCceeeeccchh---Hh
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSN--HPF-LWIIRPDLVTGETADLPAEFE---VKAKEKGFIASWCPQE---EV 373 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~--~~~-v~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~pq~---~l 373 (500)
+++++..|.... ...+..+++++..+. .++ ++.++.+. ..+.+. ++.+-++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-------DEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-------THHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-------cHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 467788888742 233555666776653 233 33334322 122222 223347788 999864 57
Q ss_pred hccCCcceeEe----ecCchhHHHHHhcCC-ceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHH
Q 010825 374 LNHPAIGGFFT----HSGWNSTIESLCAGV-PMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVREL 448 (500)
Q Consensus 374 L~~~~~~~~I~----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 448 (500)
+..+++ +|. -|.-.++.||+++|+ |+|+.... ......+ +..+. .+ ..-+.+++.++|.++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~-~~~~~--~~------~~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFA-LDERS--LF------EPNNAKDLSAKIDWW 137 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGC-SSGGG--EE------CTTCHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---Cchhhhc-cCCce--EE------cCCCHHHHHHHHHHH
Confidence 889998 665 234469999999996 99994322 2222223 32233 33 235799999999999
Q ss_pred hCCCh-hHHHHHHHHHHH
Q 010825 449 MGGEK-GKQMRNKASKWK 465 (500)
Q Consensus 449 l~~~~-~~~~~~~a~~l~ 465 (500)
++|++ .+++.+++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 138 LENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHCHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHH
Confidence 99876 234455555444
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.52 E-value=0.019 Score=59.13 Aligned_cols=137 Identities=9% Similarity=0.028 Sum_probs=74.0
Q ss_pred eEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchh---HhhccCCc
Q 010825 304 VIYVNFGSII-IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQE---EVLNHPAI 379 (500)
Q Consensus 304 vV~vs~Gs~~-~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~---~lL~~~~~ 379 (500)
.+++..|... .-..+.+...+..+.+.+.++++...++..... .-.......+.++.+....+.. .+++.+++
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~ 404 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEK---LLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV 404 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHH---HHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHH---HHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe
Confidence 3566677774 333344333333333445565554332210000 0011122345678887777753 47889998
Q ss_pred ceeEee---cCc-hhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCC----CCcCHHHHHHHHHHHhC
Q 010825 380 GGFFTH---SGW-NSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDD----NRVSRNEVEKQVRELMG 450 (500)
Q Consensus 380 ~~~I~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~----~~~~~~~l~~~i~~vl~ 450 (500)
||.= =|+ .+++||+++|+|+|+... ......+ +.-.-|........+ ...+.++|.++|.+++.
T Consensus 405 --~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 --LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp --EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred --eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 7642 233 388999999999998554 3344444 333344433111001 13467889999988875
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.51 E-value=0.0035 Score=67.06 Aligned_cols=135 Identities=20% Similarity=0.295 Sum_probs=94.7
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHh------hcCceeeeccchh---
Q 010825 301 PNSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA------KEKGFIASWCPQE--- 371 (500)
Q Consensus 301 ~~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~------~~nv~~~~~~pq~--- 371 (500)
++.+||.||......+++.+..-.+-|++.+.-.+|.+..+... ...+.+.. ++++.+.+..|+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------EPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------HHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------HHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 35699999999999999999999999999988889998754321 11222211 4678888888854
Q ss_pred HhhccCCcceeEe---ecCchhHHHHHhcCCceeeCCcccchhh---hHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHH
Q 010825 372 EVLNHPAIGGFFT---HSGWNSTIESLCAGVPMICWPFLGDQPT---NCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQV 445 (500)
Q Consensus 372 ~lL~~~~~~~~I~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~---na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i 445 (500)
..+..+|+ ++- .+|.+|+.|||+.|||+|.+| ++++. -+..+ ...|+.-.+ .-+.++-.+.-
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l-~~~gl~e~i-------a~~~~~Y~~~a 662 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQL-TCLGCLELI-------AKNRQEYEDIA 662 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHH-HHHTCGGGB-------CSSHHHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHH-HHcCCcccc-------cCCHHHHHHHH
Confidence 45567777 765 899999999999999999998 33321 22333 456665555 24556665555
Q ss_pred HHHhCCCh
Q 010825 446 RELMGGEK 453 (500)
Q Consensus 446 ~~vl~~~~ 453 (500)
.++-+|..
T Consensus 663 ~~la~d~~ 670 (723)
T 4gyw_A 663 VKLGTDLE 670 (723)
T ss_dssp HHHHHCHH
T ss_pred HHHhcCHH
Confidence 56777765
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.44 E-value=0.0022 Score=62.28 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=73.9
Q ss_pred ccccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhhcCCCCCCCCCCee-EEeCCCCCCCC
Q 010825 4 KAIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLKSRGEHSLGGLPSFR-FEAIPDGLPAS 80 (500)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~-f~~l~~~~~~~ 80 (500)
.+++-..+||+++-..+.|++.-...+.+.|.++ +.+|++++.+.+.+.++.. |.++ ++.++.. .
T Consensus 2 ~~~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~---------p~vd~vi~~~~~---~ 69 (349)
T 3tov_A 2 NAMELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN---------PNIDELIVVDKK---G 69 (349)
T ss_dssp CSCCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC---------TTCSEEEEECCS---S
T ss_pred CCcCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CCccEEEEeCcc---c
Confidence 3444567899999999999999999999999987 9999999998887766543 3443 4444310 0
Q ss_pred CCCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCe-eEEEEcCCcchHHHHHHHhCCCeEE
Q 010825 81 SDESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAV-SCIISDGFLPFTVTAAQQLGLPIVL 149 (500)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~ 149 (500)
....+. .+.++++.+... +| |++|.=....-...++...|+|..+
T Consensus 70 ---------~~~~~~---------~~~~l~~~Lr~~------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 ---------RHNSIS---------GLNEVAREINAK------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ---------HHHHHH---------HHHHHHHHHHHH------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ---------ccccHH---------HHHHHHHHHhhC------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000011 112344445443 99 9999654444456678889999765
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.38 E-value=0.0026 Score=65.58 Aligned_cols=135 Identities=10% Similarity=0.045 Sum_probs=91.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCCCCCCchHHHH-----HhhcCceeeeccchhH---
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWII--RPDLVTGETADLPAEFEV-----KAKEKGFIASWCPQEE--- 372 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~-----~~~~nv~~~~~~pq~~--- 372 (500)
.++|.+|+......++.++....-+++.+..++|.. +... + ....+.+ .+.+++.+.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g----~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--G----ITHPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--G----GGHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--h----hhHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 689999999888899999999888888887777753 3211 1 1111111 2346788888888654
Q ss_pred hhccCCcceeEe---ecCchhHHHHHhcCCceeeCCcccchhhh-HHHhhhhhcceeE-eeeCCCCCCcCHHHHHHHHHH
Q 010825 373 VLNHPAIGGFFT---HSGWNSTIESLCAGVPMICWPFLGDQPTN-CRYTCNEWGVGLE-IINGGDDNRVSRNEVEKQVRE 447 (500)
Q Consensus 373 lL~~~~~~~~I~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~~~~~~G~g~~-~~~~~~~~~~~~~~l~~~i~~ 447 (500)
.+..+|+ |+. .+|..|+.||+++|||+|.++--.=.-.. +..+ ...|+.-. + .-+.++..+...+
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI-------A~d~eeYv~~Av~ 584 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI-------ANTVDEYVERAVR 584 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE-------ESSHHHHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee-------cCCHHHHHHHHHH
Confidence 5588888 543 37889999999999999998742211111 1223 34566542 3 1467888888888
Q ss_pred HhCCCh
Q 010825 448 LMGGEK 453 (500)
Q Consensus 448 vl~~~~ 453 (500)
+.+|+.
T Consensus 585 La~D~~ 590 (631)
T 3q3e_A 585 LAENHQ 590 (631)
T ss_dssp HHHCHH
T ss_pred HhCCHH
Confidence 998876
No 54
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.30 E-value=0.0035 Score=55.18 Aligned_cols=79 Identities=10% Similarity=0.091 Sum_probs=59.0
Q ss_pred Ccee-eeccch---hHhhccCCcceeEeec---C-chhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCC
Q 010825 361 KGFI-ASWCPQ---EEVLNHPAIGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGD 432 (500)
Q Consensus 361 nv~~-~~~~pq---~~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~ 432 (500)
++.+ .+++++ ..+|..+++ +|.-. | -.++.||+++|+|+|+... ......+ ..+.|..+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~--~~~~g~~~----- 162 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILV----- 162 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC--CTTTCEEE-----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc--CCCceEEe-----
Confidence 8999 999995 368899998 66432 3 4688999999999998653 3333333 24667777
Q ss_pred CCCcCHHHHHHHHHHHhC-CCh
Q 010825 433 DNRVSRNEVEKQVRELMG-GEK 453 (500)
Q Consensus 433 ~~~~~~~~l~~~i~~vl~-~~~ 453 (500)
+ .-+.+++.++|.++++ |+.
T Consensus 163 ~-~~~~~~l~~~i~~l~~~~~~ 183 (200)
T 2bfw_A 163 K-AGDPGELANAILKALELSRS 183 (200)
T ss_dssp C-TTCHHHHHHHHHHHHHCCHH
T ss_pred c-CCCHHHHHHHHHHHHhcCHH
Confidence 3 2478999999999998 876
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.20 E-value=0.00069 Score=65.45 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=80.0
Q ss_pred CceeeeccchhHh---hccCCcceeEeecCc---------hhHHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEee
Q 010825 361 KGFIASWCPQEEV---LNHPAIGGFFTHSGW---------NSTIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEII 428 (500)
Q Consensus 361 nv~~~~~~pq~~l---L~~~~~~~~I~HgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~ 428 (500)
||.+.+|+|+.++ |..++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~- 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIV- 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEE-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEe-
Confidence 9999999998765 545566445433322 34789999999999744 55677777 789999999
Q ss_pred eCCCCCCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 010825 429 NGGDDNRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQV 489 (500)
Q Consensus 429 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~ 489 (500)
+ +.+++.+++..+.. +..++|++|+++.+++++. |.....++.+.+.++
T Consensus 289 ----~---~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 289 ----K---DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ----S---SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ----C---CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 4 47889899887643 3356799999999999885 455555555555443
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.19 E-value=0.087 Score=50.62 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=67.6
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhhcCCCCCCCCCCe-eEEeCCCCCCCCCCCCCcc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLKSRGEHSLGGLPSF-RFEAIPDGLPASSDESSTT 87 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~-~f~~l~~~~~~~~~~~~~~ 87 (500)
|||+++...+.|++.-...+.+.|.++ +.+|++++.+.+.+.+... +.+ +++.++. ... .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~---------p~i~~v~~~~~--~~~------~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM---------PEVNEAIPMPL--GHG------A 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC---------TTEEEEEEC--------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CccCEEEEecC--Ccc------c
Confidence 589999988889999999999999987 9999999998777665442 234 3444421 000 0
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEE
Q 010825 88 QDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVL 149 (500)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~ 149 (500)
.. ...+.++.+.+... +||++|.=....-...++...|+|...
T Consensus 64 ~~-------------~~~~~~l~~~l~~~------~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 LE-------------IGERRKLGHSLREK------RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -C-------------HHHHHHHHHHTTTT------TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred cc-------------hHHHHHHHHHHHhc------CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 00 11223556666654 899999322223455677888999744
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.01 E-value=0.21 Score=47.45 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=40.3
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~ 55 (500)
|||+++-..+.|++.-...+.+.|.++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 589999999999999999999999987 999999999888777655
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.53 E-value=0.13 Score=46.66 Aligned_cols=43 Identities=19% Similarity=0.100 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
.++||||+.---+. |---+.+|++.|.+ +|+|+++.|...+.-
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 56799998876665 56668888999977 899999999876543
No 59
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=89.74 E-value=1.3 Score=40.02 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=29.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
||||+.---+. |---+..|++.|.+.| +|+++.|...+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 40 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSA 40 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 46666554443 4455889999999888 8999999876544
No 60
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=89.00 E-value=4.3 Score=35.14 Aligned_cols=99 Identities=11% Similarity=0.088 Sum_probs=63.8
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc------hhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN------HRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSD 82 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~------~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~ 82 (500)
.+-.|.+++..+.|-..-.+.+|.+.+.+|++|.|+..-.. ...+... ++.+.....++...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L----------~v~~~~~g~gf~~~-- 94 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH----------GVEFQVMATGFTWE-- 94 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG----------TCEEEECCTTCCCC--
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC----------CcEEEEcccccccC--
Confidence 45688999999999999999999999999999999954321 1223332 37777776533321
Q ss_pred CCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc
Q 010825 83 ESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP 134 (500)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~ 134 (500)
..+... -.... ...+..+.+.+... ++|+||.|-+.+
T Consensus 95 ----~~~~~~----~~~~a-~~~l~~a~~~l~~~------~yDlvILDEi~~ 131 (196)
T 1g5t_A 95 ----TQNREA----DTAAC-MAVWQHGKRMLADP------LLDMVVLDELTY 131 (196)
T ss_dssp ----GGGHHH----HHHHH-HHHHHHHHHHTTCT------TCSEEEEETHHH
T ss_pred ----CCCcHH----HHHHH-HHHHHHHHHHHhcC------CCCEEEEeCCCc
Confidence 222111 11122 33445555555443 899999998654
No 61
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=88.99 E-value=1.7 Score=39.16 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=31.0
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
||||+.---+. |---+.+|++.|.+.| +|+++.|...+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 67777765554 5566889999999988 9999999876543
No 62
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.94 E-value=1.8 Score=39.30 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=27.5
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
|||+.---+. +---+..|+++|.+.| +|+++.|...+..
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 5666554443 4455788999999998 5999998776543
No 63
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=87.77 E-value=3.6 Score=37.02 Aligned_cols=58 Identities=9% Similarity=0.040 Sum_probs=36.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPD 75 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~ 75 (500)
||||+.---+. |---+..|++.|.+.| +|+++.|...+...... ..-...+++..++.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s-----iTl~~pl~~~~~~~ 58 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHA-----ITIAHPVRAYPHPS 58 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSS-----CCCSSCBEEEECCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc-----ccCCCCeEEEEecc
Confidence 46666554443 4455889999999888 89999998765432221 22223466666643
No 64
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.44 E-value=4.3 Score=40.74 Aligned_cols=107 Identities=10% Similarity=0.113 Sum_probs=69.4
Q ss_pred eeeccchh---HhhccCCcceeEe---ecCch-hHHHHHhcCC-----ceeeCCcccchhhhHHHhhhhhcceeEeeeCC
Q 010825 364 IASWCPQE---EVLNHPAIGGFFT---HSGWN-STIESLCAGV-----PMICWPFLGDQPTNCRYTCNEWGVGLEIINGG 431 (500)
Q Consensus 364 ~~~~~pq~---~lL~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~ 431 (500)
+.+++|+. +++..+|+ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.+
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv---- 401 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV---- 401 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE----
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE----
Confidence 46778865 57889998 664 34665 8899999998 666533221 11112 246666
Q ss_pred CCCCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 432 DDNRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 432 ~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
+ ..+.++++++|.++|+++.. .-++..++.++..++ -+...-++++++.+.+.
T Consensus 402 -~-p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 -N-PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp -C-TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred -C-CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4 35789999999999986431 123344444555543 45678888888888765
No 65
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=85.00 E-value=6.6 Score=39.41 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=71.7
Q ss_pred Cceeeeccch---hHhhccCCcceeEe---ecCchh-HHHHHhcC---CceeeCCcccchhhhHHHhhhhhc-ceeEeee
Q 010825 361 KGFIASWCPQ---EEVLNHPAIGGFFT---HSGWNS-TIESLCAG---VPMICWPFLGDQPTNCRYTCNEWG-VGLEIIN 429 (500)
Q Consensus 361 nv~~~~~~pq---~~lL~~~~~~~~I~---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~~~~~~G-~g~~~~~ 429 (500)
.|.+...+|+ .+++..+++ |+. .=|+|- ..|++++| .|+|+--+.+ .+ +.+| -|+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allV-- 420 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSV-- 420 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEE--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEE--
Confidence 4677788886 357888898 543 468885 58999996 5555432221 11 2233 47777
Q ss_pred CCCCCCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Q 010825 430 GGDDNRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLS 492 (500)
Q Consensus 430 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 492 (500)
+. .+.++++++|.++|+++.. +-+++.+++.+..++ -+...-.+.|++.|...
T Consensus 421 ---nP-~D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 421 ---NP-FDLVEQAEAISAALAAGPR-QRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---CT-TBHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred ---CC-CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 53 5899999999999987641 234444455555443 56678888888888653
No 66
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=84.53 E-value=4.2 Score=37.32 Aligned_cols=41 Identities=22% Similarity=0.376 Sum_probs=32.6
Q ss_pred CCcEEEEEcC--CCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 9 SKVHAVCIPS--PSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 9 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
+++++++++. |+.|-..-...||..|++.|.+|.++-.+..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3456665553 6789999999999999999999999976543
No 67
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=83.96 E-value=4.6 Score=37.14 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=29.4
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
||||+.---+. +---+..|++.|.+.| +|+++.|...+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg 40 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSA 40 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 46666554443 4455889999999988 9999999876544
No 68
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=82.93 E-value=3.2 Score=37.57 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=29.9
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
||||+.---+. |---+..|++.|.+.| +|+++.|...+.-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSG 41 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcC
Confidence 57777665544 5556888999998876 9999999876544
No 69
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=82.02 E-value=6.1 Score=36.77 Aligned_cols=39 Identities=13% Similarity=0.305 Sum_probs=31.2
Q ss_pred CcEEEEEcC--CCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPS--PSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+.++++++. |+.|-..-...||..|++.|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 345554443 678999999999999999999999997654
No 70
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=80.12 E-value=2.7 Score=36.91 Aligned_cols=46 Identities=9% Similarity=0.015 Sum_probs=39.5
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhh
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~ 56 (500)
++||++...|+.|-++ ...|.+.|.++|++|.++.++...+.+...
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 4699999999988877 889999999999999999998777666553
No 71
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=79.11 E-value=24 Score=31.20 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCC-cch---hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTE-FNH---RRFLKSRGEHSLGGLPSFRFEAIPDGLPASS 81 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~ 81 (500)
.+.+||+|+.+++.+ .+.++.+.|.+. +++|..+.+. ... +...+. ++.+..++..--.
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~----------gIp~~~~~~~~~~-- 84 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA----------GVDALHMDPAAYP-- 84 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT----------TCEEEECCGGGSS--
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc----------CCCEEEECccccc--
Confidence 445799999877743 366777788776 6888666543 222 223332 5666554311000
Q ss_pred CCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 82 DESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
+ . ... .+.+.+.++++ +||+||+-.+.. -...+-..+...++-+.++
T Consensus 85 -------~-r-------~~~-~~~~~~~l~~~---------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 -------S-R-------TAF-DAALAERLQAY---------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -------S-H-------HHH-HHHHHHHHHHT---------TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -------c-h-------hhc-cHHHHHHHHhc---------CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 111 22333445554 999999887643 3444556666677876544
No 72
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.71 E-value=2.1 Score=37.34 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
.+++||++.-.|+.+=+.-...+.+.|.++|++|.++.++...+.
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 456799999988844442789999999999999999998765443
No 73
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=77.24 E-value=13 Score=33.44 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=30.2
Q ss_pred CCcEEEEEcCC--CcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 9 SKVHAVCIPSP--SQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 9 ~~~~il~~~~~--~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
++|+.+|++.. ..|-..-.+.|++.|.++|++|.++=|
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 45666666554 447999999999999999999999853
No 74
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=76.95 E-value=3.9 Score=33.16 Aligned_cols=41 Identities=17% Similarity=0.092 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
.+.+|++.+.++..|-....-++..|..+|++|........
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p 42 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP 42 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 35689999999999999999999999999999998775433
No 75
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=76.82 E-value=12 Score=34.57 Aligned_cols=40 Identities=13% Similarity=0.258 Sum_probs=31.3
Q ss_pred CcEEEEEc--CCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 10 KVHAVCIP--SPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 10 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
+.|+++++ -|+.|-..-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34455444 45778999999999999999999999976543
No 76
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.77 E-value=4.7 Score=42.06 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=30.4
Q ss_pred eeccch---------hHhhccCCcceeEee---cCc-hhHHHHHhcCCceeeCCc
Q 010825 365 ASWCPQ---------EEVLNHPAIGGFFTH---SGW-NSTIESLCAGVPMICWPF 406 (500)
Q Consensus 365 ~~~~pq---------~~lL~~~~~~~~I~H---gG~-~s~~eal~~GvP~v~~P~ 406 (500)
-.|++. .++++.+++ ||.= =|+ .+++||+++|+|+|+.-.
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 577765 458999998 7643 344 489999999999998554
No 77
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=75.67 E-value=17 Score=30.98 Aligned_cols=38 Identities=21% Similarity=0.471 Sum_probs=30.5
Q ss_pred EEEEE--cCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 12 HAVCI--PSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 12 ~il~~--~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
|++.+ +-++.|-..-...||..|+++|++|.++-.+..
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 44444 456788999999999999999999999987543
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=75.57 E-value=3.8 Score=34.81 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=36.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFL 54 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~ 54 (500)
+||++...|+.|=+. ...+.+.|.++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 689999988877665 8899999999999999999987665543
No 79
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.99 E-value=4 Score=35.41 Aligned_cols=45 Identities=7% Similarity=0.028 Sum_probs=38.2
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC-CCEEEEEeCCcchhhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK-GFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~v~~~ 56 (500)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++...+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 589999989988766 89999999999 9999999998877766543
No 80
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.86 E-value=4.3 Score=35.59 Aligned_cols=46 Identities=20% Similarity=0.066 Sum_probs=37.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
..++||++...|+.+-+. ...|.+.|.++| +|.++.++...+.+..
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 456899999999998776 899999999999 9999999876655444
No 81
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=73.81 E-value=15 Score=32.99 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=28.4
Q ss_pred cEEEEEcCC--CcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSP--SQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~--~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
++.+|++.. ..|=..-.+.|++.|.++|.+|.++=|
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 455555544 447999999999999999999999853
No 82
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=72.42 E-value=21 Score=31.27 Aligned_cols=107 Identities=11% Similarity=0.149 Sum_probs=56.5
Q ss_pred cCCCcEEEEEcCCCcCcHHHHHHHHHHHHh-CCCEEEEEeCCc-ch---hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCC
Q 010825 7 ACSKVHAVCIPSPSQSHIKAMLKLAKLLHH-KGFHITFVNTEF-NH---RRFLKSRGEHSLGGLPSFRFEAIPDGLPASS 81 (500)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~ 81 (500)
+.+++||+++.++..+-+..++ +...+ .+++|..+.+.. .. ++.++. ++.+..++...-..
T Consensus 2 ~~~~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~----------gIp~~~~~~~~~~~- 67 (215)
T 3tqr_A 2 NREPLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAYGLKRAQQA----------DIPTHIIPHEEFPS- 67 (215)
T ss_dssp --CCEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCHHHHHHHHT----------TCCEEECCGGGSSS-
T ss_pred CCCCcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCccccCc-
Confidence 4567899999887765554444 44433 368888766532 21 223332 56655543110000
Q ss_pred CCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 82 DESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
.... .+.+.+.++++ +||+||+-.+.- -...+-+.+.-.++-+.++
T Consensus 68 ----------------r~~~-d~~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 ----------------RTDF-ESTLQKTIDHY---------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ----------------HHHH-HHHHHHHHHTT---------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----------------hhHh-HHHHHHHHHhc---------CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0001 22233444444 999999887543 3445556666677777554
No 83
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=72.06 E-value=3.6 Score=36.02 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=37.4
Q ss_pred cCCCcEEEEEcCCCcCcHHHHHHHHHHHHh-CCCEEEEEeCCcchhhhhh
Q 010825 7 ACSKVHAVCIPSPSQSHIKAMLKLAKLLHH-KGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~~~~~~~~v~~ 55 (500)
...++||++...|+.+=+. ...+.+.|.+ +|++|.++.++...+.+..
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 16 MERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp CCSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred ccCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 4567899999999988555 5899999998 8999999999876655543
No 84
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=71.78 E-value=14 Score=34.76 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
+.+|||+|+ |.-+....+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 345899999 2234444577899999999976654
No 85
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=69.19 E-value=14 Score=36.63 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=56.2
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCC--CCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIP--DGLPASSDESS 85 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~--~~~~~~~~~~~ 85 (500)
+.++|-++++. ++=.-+..+|+.|.+.|+++. ++....+.+.+. ++.+..+. .++|+......
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~----------GI~v~~V~~vTgfPEil~GRV 71 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT----------GIPVTPVEQLTGFPEVLDGRV 71 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT----------TCCCEEHHHHHSCCCCTTTTS
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc----------CCceeeccccCCCchhhCCcc
Confidence 44566666665 455568899999999998864 666666666665 55555543 24555411112
Q ss_pred ccccHHHHHHHHHH-hccchHHHHHHHHhhcCCCCCCCCeeEEEEcCC
Q 010825 86 TTQDMYSLCESIMN-NVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGF 132 (500)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~ 132 (500)
.+-.+ ..+.-++. +-......++ ++..- ...|+||++.+
T Consensus 72 KTLHP-~ihgGiLa~r~~~~h~~~l-~~~~i------~~iDlVvvNLY 111 (523)
T 3zzm_A 72 KTLHP-RVHAGLLADLRKSEHAAAL-EQLGI------EAFELVVVNLY 111 (523)
T ss_dssp SSCSH-HHHHHHHCCTTSHHHHHHH-HHHTC------CCCSEEEEECC
T ss_pred ccCCc-hhhhhhccCCCCHHHHHHH-HHCCC------CceeEEEEeCC
Confidence 22222 23333322 2213333443 44322 27899999953
No 86
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=69.15 E-value=36 Score=29.75 Aligned_cols=103 Identities=12% Similarity=0.114 Sum_probs=55.4
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCC--EEEEEeCC-cch---hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGF--HITFVNTE-FNH---RRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDES 84 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH--~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~ 84 (500)
+||+|+.+++.+ .+.++.+.|.+.+| +|..+.+. ... +...+. ++.+..++.. .
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~----------gIp~~~~~~~---~---- 61 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH----------NVECKVIQRK---E---- 61 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH----------TCCEEECCGG---G----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc----------CCCEEEeCcc---c----
Confidence 489988776653 46677788888888 77655433 222 223332 5555544211 0
Q ss_pred CccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 85 STTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
..+ .... .+.+.+.++++ +||+||+-.+.. -...+-+.+...++-+.++
T Consensus 62 --~~~--------r~~~-~~~~~~~l~~~---------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 --FPS--------KKEF-EERMALELKKK---------GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SSS--------HHHH-HHHHHHHHHHT---------TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --ccc--------hhhh-hHHHHHHHHhc---------CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 000 0111 22333445554 999999877533 3344444555567776544
No 87
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=68.33 E-value=3.4 Score=35.78 Aligned_cols=46 Identities=11% Similarity=-0.103 Sum_probs=37.7
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+++||++...|+.+=+. ...+.+.|.++|++|.++.++...+.+..
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 45699999999988775 78999999999999999999776655433
No 88
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=67.87 E-value=8.5 Score=33.07 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=37.6
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+||++...|+.|-+ -...+.++|.++|++|.++.++...+.+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 48999999998855 578999999999999999999887776655
No 89
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=67.05 E-value=5.9 Score=33.06 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=36.5
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
++.+|++.+.++..|-....-++..|...|++|.+......
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 46899999999999999999999999999999999875433
No 90
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=67.04 E-value=21 Score=35.10 Aligned_cols=42 Identities=12% Similarity=0.251 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 51 (500)
+..|+++-.++.|-..-...||..|+++|++|.++..+.++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 456777777888999999999999999999999999776543
No 91
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=66.98 E-value=37 Score=30.14 Aligned_cols=32 Identities=13% Similarity=0.111 Sum_probs=27.7
Q ss_pred cCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 17 PSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 17 ~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+-++.|-..-...||..|+++|++|.++-...
T Consensus 10 ~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 10 GKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 44677899999999999999999999987654
No 92
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=66.75 E-value=18 Score=35.38 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=25.4
Q ss_pred ccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 6 IACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
|+.+++||+++..+.. .. .+.++..+.|++|+++.+..
T Consensus 1 M~~~~k~l~Il~~~~~--~~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNKH--LP---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCTT--CC---HHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECCChh--HH---HHHHHHHHCCCEEEEEECCC
Confidence 3566789999975433 22 24566677899999987643
No 93
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=66.74 E-value=8.4 Score=33.63 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 51 (500)
.+.+|++.+.++..|-....-++..|..+|++|.++......+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~ 129 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPG 129 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4569999999999999999999999999999999988754443
No 94
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=66.10 E-value=12 Score=30.44 Aligned_cols=49 Identities=20% Similarity=0.169 Sum_probs=36.0
Q ss_pred CCCcEEEEEcCC--CcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhh
Q 010825 8 CSKVHAVCIPSP--SQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 8 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~ 56 (500)
..-||++++-.- ....+.-.+-++..|.++||+|++.+++.....++-.
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 345666665433 3356677889999999999999999998887776554
No 95
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=64.24 E-value=59 Score=28.28 Aligned_cols=103 Identities=10% Similarity=0.026 Sum_probs=56.5
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCc-ch---hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEF-NH---RRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDES 84 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~ 84 (500)
+||+++-+++.+ .+.++.+.|.+. +|+|..+.+.. .. +...+. ++.+..++..-
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~----------gIp~~~~~~~~------- 63 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE----------NVPAFVFSPKD------- 63 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT----------TCCEEECCGGG-------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc----------CCCEEEeCccc-------
Confidence 478888777643 356677788776 78997766542 22 222222 55555442100
Q ss_pred CccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 85 STTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
..+ .... .+.+.+.++++ +||+||+-.+.. -...+-..+.-.++-+.++
T Consensus 64 --~~~--------~~~~-~~~~~~~l~~~---------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 64 --YPS--------KAAF-ESEILRELKGR---------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --SSS--------HHHH-HHHHHHHHHHT---------TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --ccc--------hhhh-HHHHHHHHHhc---------CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 001 0111 22233444554 999999887543 3445556666678877554
No 96
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=63.81 E-value=7.2 Score=34.05 Aligned_cols=41 Identities=10% Similarity=-0.106 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCCcCcHHH-HHHHHHHHHhCCCEEEEEeCCcch
Q 010825 9 SKVHAVCIPSPSQSHIKA-MLKLAKLLHHKGFHITFVNTEFNH 50 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~~~~~~ 50 (500)
+++||++...|+. ..+- ...+.+.|.++|++|.++.++...
T Consensus 4 ~~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4679999888874 4554 889999999999999999987655
No 97
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=62.40 E-value=11 Score=34.13 Aligned_cols=40 Identities=18% Similarity=0.261 Sum_probs=36.2
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
..+.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4467999999999999999999999999999999988754
No 98
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=61.05 E-value=49 Score=30.88 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+++|||+|+-.+. ......+.|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 4579999987663 3345667888899999877664
No 99
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=60.46 E-value=62 Score=32.70 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=26.3
Q ss_pred HHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEE
Q 010825 105 PFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 105 ~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 150 (500)
.+.+++++. +||++|... ....+|+++|||++.+
T Consensus 447 el~~~i~~~---------~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 447 DMEVVLEKL---------KPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHH---------CCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHhc---------CCCEEEccc---chhHHHHhcCCCEEEe
Confidence 345666665 999999873 3678899999999964
No 100
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=59.99 E-value=8.7 Score=32.76 Aligned_cols=44 Identities=7% Similarity=-0.067 Sum_probs=35.6
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+||++...|+.+=+ -...+.+.|.++|++|.++.++...+.+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 37888888887766 578999999999999999999876655433
No 101
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=59.10 E-value=35 Score=32.32 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=34.2
Q ss_pred cEEEEE-cCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhh
Q 010825 11 VHAVCI-PSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 11 ~~il~~-~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~ 56 (500)
.+|+|+ .-|+.|-..-...||..|+++|++|.++..+.. ..+...
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~-~~l~~~ 71 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA-HSLRDI 71 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT-CHHHHH
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC-CCHHHH
Confidence 344444 446789999999999999999999999998763 344333
No 102
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=59.04 E-value=18 Score=34.01 Aligned_cols=33 Identities=9% Similarity=-0.033 Sum_probs=29.2
Q ss_pred EcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 16 IPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 16 ~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
..-|+.|-..-...||..|+++|++|.++..+.
T Consensus 20 sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 20 GGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 345678999999999999999999999999866
No 103
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=59.01 E-value=14 Score=32.46 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=37.5
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 51 (500)
.++.+|++.+.++..|-....-++..|..+|++|..+...-..+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e 133 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNE 133 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHH
Confidence 45689999999999999999999999999999999988654433
No 104
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=58.74 E-value=90 Score=27.09 Aligned_cols=102 Identities=8% Similarity=0.089 Sum_probs=56.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCc-ch---hhhhhhcCCCCCCCCCCeeEEeCCC-CCCCCCCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEF-NH---RRFLKSRGEHSLGGLPSFRFEAIPD-GLPASSDE 83 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~f~~l~~-~~~~~~~~ 83 (500)
+||+++.++..+ -+.+|.+.+.+. +|+|..+.+.. .. +...+. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~----------gIp~~~~~~~~~~----- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA----------GIATHTLIASAFD----- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT----------TCEEEECCGGGCS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc----------CCcEEEeCccccc-----
Confidence 478888877664 356677777665 68887665432 21 223332 566655431 110
Q ss_pred CCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 84 SSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
+ .... .+.+.+.++++ +||+||+-.+.. -...+-..+...++-+.++
T Consensus 63 -----~--------r~~~-~~~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 -----S--------REAY-DRELIHEIDMY---------APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -----S--------HHHH-HHHHHHHHGGG---------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----c--------hhhc-cHHHHHHHHhc---------CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 0111 22223334444 999999887643 3444556666778877554
No 105
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=58.72 E-value=28 Score=34.45 Aligned_cols=88 Identities=16% Similarity=0.243 Sum_probs=53.8
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQ 88 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 88 (500)
.++|++++.- -.-.+.+++-|.+-|.+|..+.+....+...+. +.. .. ...
T Consensus 312 ~Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~---------------------~~~--~v-~~~ 362 (458)
T 3pdi_B 312 SSARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS---------------------PLP--SV-RVG 362 (458)
T ss_dssp TTCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT---------------------TSS--CE-EES
T ss_pred CCCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC---------------------ccC--cE-EeC
Confidence 3578888543 244567888888889999888764421111110 000 00 001
Q ss_pred cHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEE
Q 010825 89 DMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 150 (500)
|+ ..+++++++. +||++|.+.. +..+|+++|||++.+
T Consensus 363 D~-------------~~le~~i~~~---------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 363 DL-------------EDLEHAARAG---------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HH-------------HHHHHHHHHH---------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred CH-------------HHHHHHHHhc---------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 11 1234556665 9999999854 678999999999975
No 106
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=57.54 E-value=75 Score=29.80 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=32.5
Q ss_pred CcEEEEE-cCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 10 KVHAVCI-PSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 10 ~~~il~~-~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
+++|+|+ .-|+.|-..-...||..|+++|++|.++..+..
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 3455554 456789999999999999999999999998743
No 107
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=57.15 E-value=15 Score=32.54 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
-+++|++.--|+.|-..-++.+|..|+++|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3689999999999999999999999999999998887654
No 108
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=56.67 E-value=35 Score=33.53 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=34.2
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC-CCEEEEEeCCcch
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK-GFHITFVNTEFNH 50 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~~~ 50 (500)
..|+++..++.|-..-...||..|+++ |+.|.++....++
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 466677777889999999999999999 9999999887654
No 109
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=56.33 E-value=34 Score=32.34 Aligned_cols=46 Identities=7% Similarity=0.093 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCcC--cH--HHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 10 KVHAVCIPSPSQS--HI--KAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 10 ~~~il~~~~~~~G--H~--~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+.-|++.|..+.. .| .-+.+|++.|.++|++|.++..+...+..++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~ 234 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQP 234 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHH
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHH
Confidence 4466777765443 33 4589999999989999988776655554433
No 110
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=55.87 E-value=19 Score=27.50 Aligned_cols=41 Identities=22% Similarity=0.301 Sum_probs=27.9
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (500)
.+.++.+... +||+||.|...+ .+..+.+++ ++|+++++..
T Consensus 36 ~~al~~l~~~------~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 36 QIALEKLSEF------TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHTTB------CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHhc------CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 3445555444 899999998665 466666654 5888887654
No 111
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=55.32 E-value=72 Score=28.43 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=28.5
Q ss_pred cCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 010825 17 PSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (500)
Q Consensus 17 ~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 50 (500)
.-|+.|=..-...||..|+++|++|.++-.....
T Consensus 26 ~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 26 GKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4557789999999999999999999999765443
No 112
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=55.31 E-value=7.1 Score=30.88 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHH---hCCCeEEE
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQ---LGLPIVLL 150 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~---lgiP~v~~ 150 (500)
.+.++.+... +||+||.|...+ .|..+++. .++|+|++
T Consensus 43 ~eAl~~~~~~------~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 43 QEALDIARKG------QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHHC------CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHhC------CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 4445555554 999999998776 45555554 47897765
No 113
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=55.27 E-value=15 Score=29.50 Aligned_cols=32 Identities=13% Similarity=0.363 Sum_probs=24.8
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 154 (500)
+||+||.|...+ .|..+++++ .+|+++++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 899999999877 577777755 58988876443
No 114
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.82 E-value=13 Score=32.91 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=44.0
Q ss_pred CCcceeEeecCchhHHHHHhcCCceeeCCccc-----------------------chhhhHHHhhhhhcceeEeeeCCCC
Q 010825 377 PAIGGFFTHSGWNSTIESLCAGVPMICWPFLG-----------------------DQPTNCRYTCNEWGVGLEIINGGDD 433 (500)
Q Consensus 377 ~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~-----------------------DQ~~na~~~~~~~G~g~~~~~~~~~ 433 (500)
+++ +|+.||........ .++|+|-++..+ .....+..+.+-+|+-+.. -
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~-----~ 135 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQ-----R 135 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEE-----E
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEE-----E
Confidence 566 99999999999975 689999999832 2233334443334444433 2
Q ss_pred CCcCHHHHHHHHHHHhCCC
Q 010825 434 NRVSRNEVEKQVRELMGGE 452 (500)
Q Consensus 434 ~~~~~~~l~~~i~~vl~~~ 452 (500)
..-+++++...|.++..++
T Consensus 136 ~~~~~ee~~~~i~~l~~~G 154 (225)
T 2pju_A 136 SYITEEDARGQINELKANG 154 (225)
T ss_dssp EESSHHHHHHHHHHHHHTT
T ss_pred EeCCHHHHHHHHHHHHHCC
Confidence 3456777777777776543
No 115
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.58 E-value=9.2 Score=31.23 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++.||+++- .|++= ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456788873 35443 78899999999999999874
No 116
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=54.40 E-value=9.6 Score=32.95 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=24.4
Q ss_pred cCCcceeEeecCchhHHHHHhcCCceeeCCcc
Q 010825 376 HPAIGGFFTHSGWNSTIESLCAGVPMICWPFL 407 (500)
Q Consensus 376 ~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~ 407 (500)
.+++ +|+.||........ .++|+|-+|..
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCC
Confidence 4456 99999999999975 68999999983
No 117
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=54.00 E-value=79 Score=28.38 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=24.1
Q ss_pred CCeeEEEE-cCCcc-hHHHHHHHhCCCeEEEeccc
Q 010825 122 PAVSCIIS-DGFLP-FTVTAAQQLGLPIVLLFTIS 154 (500)
Q Consensus 122 ~~pDlvI~-D~~~~-~~~~~A~~lgiP~v~~~~~~ 154 (500)
..||+||+ |+..- .+..=|.++|||+|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 37898884 55332 56777999999999986553
No 118
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=53.94 E-value=77 Score=27.48 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=56.3
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCc-ch---hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEF-NH---RRFLKSRGEHSLGGLPSFRFEAIPDGLPASS 81 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~ 81 (500)
|.|+||+++.++..+- +.+|.+.+.+. .++|..+.+.. .. +..++. ++.+..++...-.
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~----------gIp~~~~~~~~~~-- 69 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA----------GIATQVFKRKDFA-- 69 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT----------TCCEEECCGGGSS--
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc----------CCCEEEeCccccC--
Confidence 5578999998777544 44555666554 37887766532 21 223332 5655554311000
Q ss_pred CCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 82 DESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
+ .... ++.+.+.++++ +||+||+-.+.. -...+-+.+.-.++-+.++
T Consensus 70 -------~--------r~~~-d~~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 70 -------S--------KEAH-EDAILAALDVL---------KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -------S--------HHHH-HHHHHHHHHHH---------CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -------C--------HHHH-HHHHHHHHHhc---------CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 0111 23334555665 999999887543 3344445555567776544
No 119
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=53.30 E-value=11 Score=34.58 Aligned_cols=53 Identities=21% Similarity=0.230 Sum_probs=36.8
Q ss_pred CCcceeEeecCchhHHHHHhc------CCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC
Q 010825 377 PAIGGFFTHSGWNSTIESLCA------GVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMG 450 (500)
Q Consensus 377 ~~~~~~I~HgG~~s~~eal~~------GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 450 (500)
+++ +|.=||-||+.+++.. ++|++.+|.. .+|.- ..+.++++.+++.++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgfl---------~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGFY---------ADWRPAEADKLVKLLAK 92 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCSS---------CCBCGGGHHHHHHHHHT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCcC---------CcCCHHHHHHHHHHHHc
Confidence 355 9999999999999775 8898888741 11211 23456777888887776
Q ss_pred CC
Q 010825 451 GE 452 (500)
Q Consensus 451 ~~ 452 (500)
+.
T Consensus 93 g~ 94 (272)
T 2i2c_A 93 GE 94 (272)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 120
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=52.84 E-value=52 Score=30.63 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++|||+|+-.+.. .....+.|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 4689999987543 345557777789999877654
No 121
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=52.81 E-value=15 Score=33.75 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=24.3
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|||++. |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfI--G~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFI--GTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 576554 555543 467899999999999998753
No 122
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=52.60 E-value=19 Score=38.17 Aligned_cols=113 Identities=11% Similarity=-0.012 Sum_probs=75.5
Q ss_pred eeccchhHhhccCCcceeEeecCchhHHHHHhcCCceeeCCcccchhhhH-HHhh---hhhcceeEeeeCCCCCCcCHHH
Q 010825 365 ASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPMICWPFLGDQPTNC-RYTC---NEWGVGLEIINGGDDNRVSRNE 440 (500)
Q Consensus 365 ~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na-~~~~---~~~G~g~~~~~~~~~~~~~~~~ 440 (500)
.++.+-.++|..+|+ +||=- .+.+.|.+..++|+|.+..-.|++..- +-.- ++.--|.. .-+.++
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~--------~~~~~e 672 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPI--------YTEPYG 672 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCE--------ESSHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCe--------ECCHHH
Confidence 455667889999999 99874 457889999999999987665654331 0000 01111222 478899
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHh
Q 010825 441 VEKQVRELMGGEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLL 491 (500)
Q Consensus 441 l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~ 491 (500)
|.++|.+...+.. .++++.+++.+++... +.|.++++.++.+++....
T Consensus 673 L~~~i~~~~~~~~--~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 673 LAKELKNLDKVQQ--QYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHTTHHHHHH--HTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccch--hHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcC
Confidence 9999988875322 3788888888888753 4566666666666666543
No 123
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=52.27 E-value=70 Score=29.87 Aligned_cols=42 Identities=7% Similarity=-0.003 Sum_probs=33.1
Q ss_pred EEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 13 AVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 13 il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+++..-|+.|-..-...||..|+++|++|.++..+.. ..+..
T Consensus 22 ~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~-~~l~~ 63 (329)
T 2woo_A 22 IFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA-HNLSD 63 (329)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT-CHHHH
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC-cCHHH
Confidence 3444556789999999999999999999999988654 33333
No 124
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=52.03 E-value=1.2e+02 Score=26.28 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=54.3
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcch----hhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNH----RRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDES 84 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~ 84 (500)
+||+++.++..+-+.. |.+.+.+. +|+|..+.+.... +...+. ++.+..++.....
T Consensus 1 ~riaVl~SG~Gs~L~a---Li~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~----------gIp~~~~~~~~~~----- 62 (209)
T 1meo_A 1 ARVAVLISGTGSNLQA---LIDSTREPNSSAQIDIVISNKAAVAGLDKAERA----------GIPTRVINHKLYK----- 62 (209)
T ss_dssp CEEEEEESSSCTTHHH---HHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT----------TCCEEECCGGGSS-----
T ss_pred CeEEEEEECCchHHHH---HHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc----------CCCEEEECccccC-----
Confidence 4788888887765444 44555443 7999777643322 222232 5555443211000
Q ss_pred CccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 85 STTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
+ . ... .+.+.+.++++ +||+||+-.+.. -...+-..+...++-+.++
T Consensus 63 ----~-r-------~~~-~~~~~~~l~~~---------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 63 ----N-R-------VEF-DSAIDLVLEEF---------SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ----S-H-------HHH-HHHHHHHHHHT---------TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----c-h-------hhh-hHHHHHHHHhc---------CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0 0 011 22233445554 999999876542 3344445666677877544
No 125
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=51.54 E-value=68 Score=30.73 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++++||+++-.+.. .+.+++++.+.|++|.++...
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 46789999877654 366889999999999999754
No 126
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.49 E-value=29 Score=27.68 Aligned_cols=41 Identities=7% Similarity=-0.005 Sum_probs=29.6
Q ss_pred cEEEEEc-CC--CcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 010825 11 VHAVCIP-SP--SQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (500)
Q Consensus 11 ~~il~~~-~~--~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 51 (500)
+|++++. .+ +.......+.+|...++.||+|+++.......
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 3454443 34 34577788899999999999999998866543
No 127
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=51.19 E-value=23 Score=30.19 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=43.4
Q ss_pred hhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCChh----HHHHHHHHHHHHHHHH--Hh--CCCCChHHHHH
Q 010825 412 TNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEKG----KQMRNKASKWKRFAEE--AT--APDGSSATNLE 483 (500)
Q Consensus 412 ~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~----~~~~~~a~~l~~~~~~--~~--~~~g~~~~~~~ 483 (500)
+.+..- ++.|+|+.+ |+|+|.++|.++++.... +.|+ +.-.+-..+++ .+ +.+......++
T Consensus 103 d~~~Fe-~~cGVGV~V---------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD 171 (187)
T 3tl4_X 103 TKMGMN-ENSGVGIEI---------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIID 171 (187)
T ss_dssp CHHHHH-HTTTTTCCC---------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHH
T ss_pred CHHHHH-HHCCCCeEe---------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHH
Confidence 334444 679999998 899999999999964331 2355 55555555554 12 45555566666
Q ss_pred HHHHHHH
Q 010825 484 KLVNQVL 490 (500)
Q Consensus 484 ~l~~~~~ 490 (500)
+-+-.++
T Consensus 172 ~~~l~lL 178 (187)
T 3tl4_X 172 QEVLKLL 178 (187)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 5554443
No 128
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=50.80 E-value=55 Score=30.29 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCcC--cH--HHHHHHHHHHHhCCCEEEEE-eCCcch
Q 010825 10 KVHAVCIPSPSQS--HI--KAMLKLAKLLHHKGFHITFV-NTEFNH 50 (500)
Q Consensus 10 ~~~il~~~~~~~G--H~--~p~l~La~~L~~rGH~Vt~~-~~~~~~ 50 (500)
+..|++.|..+.. .| .-+.+|++.|.++|++|.++ +++...
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~ 223 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEE 223 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHH
Confidence 4567777755432 23 36889999999889998876 433333
No 129
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=50.42 E-value=78 Score=25.47 Aligned_cols=100 Identities=18% Similarity=0.207 Sum_probs=57.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQ 88 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 88 (500)
|+.. ++++.. ..+=.-++.+|+.|.+.|+++ +++....+.+.+. ++....+.+.-..+
T Consensus 23 P~~g-vliSv~-d~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~----------Gi~v~~v~k~~egg-------- 80 (143)
T 2yvq_A 23 PQKG-ILIGIQ-QSFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN----------NVPATPVAWPSQEG-------- 80 (143)
T ss_dssp CCSE-EEEECC-GGGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT----------TCCCEEECCGGGC---------
T ss_pred CCCC-EEEEec-ccchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc----------CCeEEEEEeccCCC--------
Confidence 3345 555543 346677899999999999974 4444555666654 45444443211110
Q ss_pred cHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCc--------chHHHHHHHhCCCeEE
Q 010825 89 DMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFL--------PFTVTAAQQLGLPIVL 149 (500)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~--------~~~~~~A~~lgiP~v~ 149 (500)
+ ... .+.+.++++. . +.|+||..+-- +.....|-.+|||++.
T Consensus 81 ~---------~~~-~~~i~d~i~~---g------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 81 Q---------NPS-LSSIRKLIRD---G------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp --------------CBCHHHHHHT---T------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred c---------ccc-cccHHHHHHC---C------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0 000 1333444443 2 89999975532 1345678899999996
No 130
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=50.21 E-value=1.2e+02 Score=26.99 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=30.8
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc---hHHHHHHHhCCCeEE
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLP---FTVTAAQQLGLPIVL 149 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~---~~~~~A~~lgiP~v~ 149 (500)
..++.+++.+++. .++++|..+. -+..+|+++|+|++.
T Consensus 115 ~~m~~vm~~l~~~--------gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 115 KIMRAILEVVKEK--------NAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHT--------TCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHC--------CCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4567888888754 7999999753 688999999999997
No 131
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=49.91 E-value=55 Score=28.58 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHh-CCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHH-KGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~~~~ 48 (500)
..++||+++.+++.+-+..++ +.+.+ .+++|..+.+..
T Consensus 10 ~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~ 48 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDR 48 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESS
T ss_pred CCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCC
Confidence 456899999888755444443 44432 356887766543
No 132
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=49.26 E-value=12 Score=33.19 Aligned_cols=38 Identities=11% Similarity=0.007 Sum_probs=33.5
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
|||+|..-|+.|=..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888888888999999999999999999999997544
No 133
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=49.08 E-value=32 Score=26.52 Aligned_cols=65 Identities=6% Similarity=-0.057 Sum_probs=46.8
Q ss_pred hccCCcceeEeecCchh---------HHHHHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHH
Q 010825 374 LNHPAIGGFFTHSGWNS---------TIESLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQ 444 (500)
Q Consensus 374 L~~~~~~~~I~HgG~~s---------~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~ 444 (500)
++.+++ +|--.|..| +-.|...|+|++++=.++.+- .-..+ ++.+..+.. -+.+.|.++
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV~--------Wn~~~I~~a 103 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVVG--------WNPHCIRDA 103 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEEC--------SCHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceecc--------CCHHHHHHH
Confidence 455666 999999998 677889999999976666541 22224 445555555 789999999
Q ss_pred HHHHhC
Q 010825 445 VRELMG 450 (500)
Q Consensus 445 i~~vl~ 450 (500)
|+..++
T Consensus 104 I~~~~~ 109 (111)
T 1eiw_A 104 LEDALD 109 (111)
T ss_dssp HHHHHC
T ss_pred HHhccC
Confidence 988764
No 134
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=48.26 E-value=10 Score=36.30 Aligned_cols=42 Identities=24% Similarity=0.174 Sum_probs=30.1
Q ss_pred ccccccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 2 ESKAIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 2 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+++.+++.++||.|+-.|..|. .+|..|++.||+|++.....
T Consensus 21 ~~~~m~~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 21 QSNAMEPFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp ------CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSCH
T ss_pred hhhcccccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 3455556678999998887774 68899999999999998753
No 135
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=47.21 E-value=1.6e+02 Score=27.12 Aligned_cols=43 Identities=16% Similarity=0.259 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCcC---cHH--HHHHHHHHHHhCCCEEEEEeCCcchhh
Q 010825 10 KVHAVCIPSPSQS---HIK--AMLKLAKLLHHKGFHITFVNTEFNHRR 52 (500)
Q Consensus 10 ~~~il~~~~~~~G---H~~--p~l~La~~L~~rGH~Vt~~~~~~~~~~ 52 (500)
+..|++.|....+ .|. -+.++++.|.++|++|.++..+...+.
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~ 227 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEA 227 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHH
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHH
Confidence 3456666644232 333 688999999999999988776554443
No 136
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=47.09 E-value=26 Score=27.50 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+|+|+++-. |.+ -..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 478888832 554 346889999999999998764
No 137
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=46.44 E-value=19 Score=27.52 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEE
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFV 44 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~ 44 (500)
++.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 4558999999999998876777778888889876543
No 138
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=46.35 E-value=20 Score=34.52 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=29.0
Q ss_pred EEEEEc-CCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 12 HAVCIP-SPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 12 ~il~~~-~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
+|+++. -++.|-..-...+|..|+++|++|.++..
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 455554 45668999999999999999999999988
No 139
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=46.07 E-value=82 Score=29.29 Aligned_cols=34 Identities=15% Similarity=0.112 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+|||+|+-.+..+- ...++|.+.||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 58999998876653 45678888999998777643
No 140
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=45.80 E-value=59 Score=26.62 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=63.5
Q ss_pred CccccccCCC-cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhh-hcCCCCCCCCCCeeEEeCCCC
Q 010825 1 MESKAIACSK-VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLK-SRGEHSLGGLPSFRFEAIPDG 76 (500)
Q Consensus 1 ~~~~~~~~~~-~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~f~~l~~~ 76 (500)
|+.+.+++|+ .+|++.. .-.+=.-++.+|+.|.+. ||++ +.+......+.+ . ++....+-++
T Consensus 1 ~~~~~~~~p~~g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~~----------Gl~v~~v~k~ 66 (152)
T 1b93_A 1 MELTTRTLPARKHIALVA--HDHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRAT----------GMNVNAMLSG 66 (152)
T ss_dssp CCEEEEEECSSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHHH----------CCCCEEECCG
T ss_pred CCceeecCCCCCEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHHh----------CceeEEEEec
Confidence 6667777444 6666664 345567789999999998 9965 455555566666 4 4544443211
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCC--cc--------hHHHHHHHhCCC
Q 010825 77 LPASSDESSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGF--LP--------FTVTAAQQLGLP 146 (500)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~--~~--------~~~~~A~~lgiP 146 (500)
...+ .+++.+++++ . +.|+||.-.- .. .-..+|-.+|||
T Consensus 67 ~eGG----------------------~p~I~d~I~~---g------eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP 115 (152)
T 1b93_A 67 PMGG----------------------DQQVGALISE---G------KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIP 115 (152)
T ss_dssp GGTH----------------------HHHHHHHHHT---T------CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCC
T ss_pred CCCC----------------------CchHHHHHHC---C------CccEEEEcCCcccCCcccccHHHHHHHHHHcCCC
Confidence 1001 2333344443 2 8999996442 21 245678899999
Q ss_pred eEEE
Q 010825 147 IVLL 150 (500)
Q Consensus 147 ~v~~ 150 (500)
++..
T Consensus 116 ~~T~ 119 (152)
T 1b93_A 116 VATN 119 (152)
T ss_dssp EESS
T ss_pred EEeC
Confidence 9963
No 141
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=45.60 E-value=29 Score=32.18 Aligned_cols=39 Identities=5% Similarity=-0.047 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCcC-c---HHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQS-H---IKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~G-H---~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
++||+++..+..+ | +.-...++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5789888865444 2 3467889999999999999998544
No 142
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=45.22 E-value=31 Score=26.89 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=22.1
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++.+ .+|+++++..
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 899999998665 465555443 5888887654
No 143
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.00 E-value=37 Score=25.69 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=21.9
Q ss_pred CeeEEEEcCCcc--hHHHHHHH----hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ----LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~----lgiP~v~~~~~ 153 (500)
+||+||.|...+ .+..+.+. .++|.++++..
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 899999998665 45555543 36888887544
No 144
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=42.91 E-value=27 Score=28.37 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.++++|+++-.+..| ..+++.|.++|++|+++....
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 445889988543333 568899999999999997643
No 145
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=42.33 E-value=1.9e+02 Score=28.99 Aligned_cols=34 Identities=12% Similarity=0.032 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.++|++++. .-.-.+.|++-|.+-|.+|..+...
T Consensus 363 ~GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 363 HGKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TTCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 357888872 3344567777888889998887653
No 146
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=42.23 E-value=54 Score=31.06 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=50.1
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC----C----CCCc-hHHHHHh-hcCcee-eec---
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGE----T----ADLP-AEFEVKA-KEKGFI-ASW--- 367 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~----~----~~~~-~~~~~~~-~~nv~~-~~~--- 367 (500)
+.+|+.+-||-....+ ...++++|.+.+++++|+.+.+..+.. . ..++ .++..+. ..++.. ..+
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 3567666777542222 235778888889999998765432110 0 0011 1111000 011110 000
Q ss_pred cch-hHhhc--cCCcceeEeecCchhH---HHHHhcCCceee
Q 010825 368 CPQ-EEVLN--HPAIGGFFTHSGWNST---IESLCAGVPMIC 403 (500)
Q Consensus 368 ~pq-~~lL~--~~~~~~~I~HgG~~s~---~eal~~GvP~v~ 403 (500)
+.+ ..++. ++|+ +|++||.-|+ .-|-..|+|.++
T Consensus 81 ~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 81 LFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 111 12343 6787 9999998775 456678999986
No 147
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=42.13 E-value=78 Score=28.17 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcCcH-HHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHI-KAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~-~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|||+++-.-+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 57777776666555 45566777777667777777653
No 148
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=41.95 E-value=1.5e+02 Score=24.63 Aligned_cols=143 Identities=12% Similarity=0.067 Sum_probs=77.7
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
+|.|-|-+||.+ +....++....++..+..+-..+.+-.. .|+...+... + .....++.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR------~p~~l~~~~~----------~---a~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR------TPDYMFEYAE----------T---ARERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT------SHHHHHHHHH----------H---TTTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC------CHHHHHHHHH----------H---HHhCCCcE
Confidence 356777788875 4556677778888888887555544332 4443322110 0 00111223
Q ss_pred eEeecCchhH---HHHHhcCCceeeCCcccc--hhhhHHHhhhh--hcceeEeeeCCCC--CCcCHHHHHHHHHHHhCCC
Q 010825 382 FFTHSGWNST---IESLCAGVPMICWPFLGD--QPTNCRYTCNE--WGVGLEIINGGDD--NRVSRNEVEKQVRELMGGE 452 (500)
Q Consensus 382 ~I~HgG~~s~---~eal~~GvP~v~~P~~~D--Q~~na~~~~~~--~G~g~~~~~~~~~--~~~~~~~l~~~i~~vl~~~ 452 (500)
+|.=.|...- +=|-..-+|+|.+|.-.. ....+-.-.-+ .|+.+..-+ -+ ...++.-+...|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~--I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVA--IGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECC--SSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEe--cCCcchHHHHHHHHHHH-ccCCH
Confidence 7776664422 223345789999998542 11111110012 455432200 02 3456666666664 44666
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 010825 453 KGKQMRNKASKWKRFAEEA 471 (500)
Q Consensus 453 ~~~~~~~~a~~l~~~~~~~ 471 (500)
. ++++.++.++.+++.
T Consensus 147 ~---l~~kl~~~r~~~~~~ 162 (170)
T 1xmp_A 147 D---IHDALELRREAIEKD 162 (170)
T ss_dssp H---HHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHH
Confidence 6 999999999888864
No 149
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=41.76 E-value=2e+02 Score=26.13 Aligned_cols=105 Identities=10% Similarity=0.070 Sum_probs=58.6
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeC-Ccc-hhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNT-EFN-HRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE 83 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~-~~~-~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~ 83 (500)
.+++||+++.++. || -+.+|..+-.+- ..+|..+.+ ... ....++. ++.+..+|... .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~--~--- 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH----------KIPYYHFALDP--K--- 149 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCBT--T---
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCc--C---
Confidence 5578999998887 44 334444443332 368776654 332 3333332 67777765321 1
Q ss_pred CCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 84 SSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
+ .... .+.+.+++++. ++|+||+-.+.- -...+-+.+.-.++-+.++
T Consensus 150 -----~--------r~~~-~~~~~~~l~~~---------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 -----D--------KPGQ-ERKVLQVIEET---------GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -----B--------HHHH-HHHHHHHHHHH---------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -----C--------HHHH-HHHHHHHHHhc---------CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 0011 23344555665 899999887643 4455556666677776544
No 150
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=41.34 E-value=64 Score=30.83 Aligned_cols=62 Identities=21% Similarity=0.246 Sum_probs=44.1
Q ss_pred eccchhHhhccCCcceeEe----ecCch--hHHHHHhcCCceee-CCcccchhhhHHHhhhhhcceeEe
Q 010825 366 SWCPQEEVLNHPAIGGFFT----HSGWN--STIESLCAGVPMIC-WPFLGDQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 366 ~~~pq~~lL~~~~~~~~I~----HgG~~--s~~eal~~GvP~v~-~P~~~DQ~~na~~~~~~~G~g~~~ 427 (500)
-|-+..+++...|+..+.+ |+|.+ -+.+||.+|+++++ =|+..|+-.-..+++++.|+-..+
T Consensus 56 ~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 56 LYTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp EESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3556678888888744443 55543 36788999999988 777667666666666788888887
No 151
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=41.12 E-value=1.4e+02 Score=30.04 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.++|++++. .-.-.+.|++.|.+-|-+|..+....
T Consensus 359 ~Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 359 HGKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TTCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 467888874 33446677888888899988765533
No 152
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=41.02 E-value=2.2e+02 Score=26.22 Aligned_cols=105 Identities=10% Similarity=0.151 Sum_probs=58.0
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeC-Cc-chhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNT-EF-NHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE 83 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~-~~-~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~ 83 (500)
.+++||+++.++. || -+.+|..+..+- +.+|..+.+ .. ..+..++. ++.+..+|... ..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~----------gIp~~~~~~~~-~~--- 165 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH----------DIPYYHVPVDP-KD--- 165 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT----------TCCEEECCCCS-SC---
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc----------CCCEEEcCCCc-CC---
Confidence 4578999999877 55 344555554332 468877654 32 23333332 67777665211 01
Q ss_pred CCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 84 SSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
. ... .+.+.+++++. +||+||+-.+.- -...+-+.+.-.++-+.++
T Consensus 166 ---r-----------~~~-~~~~~~~l~~~---------~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 ---K-----------EPA-FAEVSRLVGHH---------QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---C-----------HHH-HHHHHHHHHHT---------TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---H-----------HHH-HHHHHHHHHHh---------CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0 001 22333445554 999999887643 3444555666677776544
No 153
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=40.78 E-value=19 Score=33.25 Aligned_cols=44 Identities=11% Similarity=0.007 Sum_probs=24.0
Q ss_pred Ccccccc-CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 1 MESKAIA-CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 1 ~~~~~~~-~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|+.++++ -++.+.++++ |+.|.+ -..|++.|.++||+|+.+.-.
T Consensus 1 ~~~~~~~~~~~~~~vlVT-GatG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 1 MRGSHHHHHHGSMRALIT-GVAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ------------CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcccccccCcceEEEE-CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 4445555 3445555555 555543 577899999999999988653
No 154
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.54 E-value=29 Score=29.84 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=33.5
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEecc
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~ 153 (500)
..++..++++... ++|+||.|.. +..+|+++|+|.+.+.+.
T Consensus 129 ~e~~~~i~~l~~~------G~~vvVG~~~---~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 129 DEITTLISKVKTE------NIKIVVSGKT---VTDEAIKQGLYGETINSG 169 (196)
T ss_dssp GGHHHHHHHHHHT------TCCEEEECHH---HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHHHC------CCeEEECCHH---HHHHHHHcCCcEEEEecC
Confidence 4567778888776 9999999853 688999999999998654
No 155
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=40.04 E-value=31 Score=31.75 Aligned_cols=40 Identities=5% Similarity=-0.064 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+...|+|..-|+.|=..-...||..|+++|++|.++-.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3356666677788999999999999999999999996543
No 156
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.77 E-value=31 Score=31.22 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+++|++. |+ | .--..|++.|.++||+|+.+.-.
T Consensus 3 ~~~ilVt--Ga-G--~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA--GC-G--DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE--CC-S--HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE--CC-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4577766 35 6 45678999999999999998754
No 157
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.63 E-value=31 Score=24.42 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=34.8
Q ss_pred hcCCceeeCCcccchhhhHHHhh--hhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC
Q 010825 396 CAGVPMICWPFLGDQPTNCRYTC--NEWGVGLEIINGGDDNRVSRNEVEKQVRELMG 450 (500)
Q Consensus 396 ~~GvP~v~~P~~~DQ~~na~~~~--~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 450 (500)
-.|+|++++--.+.|.+.-..-- ..-|+..-+ -++-++|++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydv-----lkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDV-----LKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEE-----EECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhh-----hccCCHHHHHHHHHHHHH
Confidence 36899999888887766432211 334666655 478899999999988874
No 158
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=39.46 E-value=33 Score=27.10 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=21.9
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh---------CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL---------GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l---------giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++.+ .+|+++++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 899999998665 466665544 2788887544
No 159
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=39.12 E-value=21 Score=31.68 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
+++|||.|+-.|..|- .||+.|+++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 5678999999999984 588999999999998766
No 160
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=38.36 E-value=2.5e+02 Score=26.13 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=59.0
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcc
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIG 380 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 380 (500)
.+.+|.+|.+. ...+.++.+. +..++.+.... ++.. +......-+.-+-...++|..+++.
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~---------~~~~-~~~~~~~~~~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID---------PAAL-KAAVERTGARGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS---------HHHH-HHHHHHHCCEEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC---------HHHH-HHHHHHcCCceeCCHHHHhcCCCCC
Confidence 58899999886 2345666655 44556555422 1211 1111111124455677888754443
Q ss_pred eeEeecCch----hHHHHHhcCCceee-CCcccc--hhhhHHHhhhhhcceeEe
Q 010825 381 GFFTHSGWN----STIESLCAGVPMIC-WPFLGD--QPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 381 ~~I~HgG~~----s~~eal~~GvP~v~-~P~~~D--Q~~na~~~~~~~G~g~~~ 427 (500)
+++--.-.. -+.+++.+|+++++ =|+..+ +-.-...++++.|+-+.+
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 355433322 35678889998887 466443 333333333667777766
No 161
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.27 E-value=43 Score=27.05 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=34.5
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
++-.+++..+..-.+++.+.+|...++.|++|+++.+......+.+
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 3344455555667889999999999999999999998766554444
No 162
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=37.92 E-value=13 Score=34.52 Aligned_cols=36 Identities=6% Similarity=0.193 Sum_probs=27.1
Q ss_pred ccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 010825 6 IACSKVHAVCIPSPSQSHIKAMLKLAKLLHHK-----G-FHITFVNT 46 (500)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-H~Vt~~~~ 46 (500)
++..+|||+|+-.|..|. .+|..|++. | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 345568999998887774 567888888 9 99999976
No 163
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=37.57 E-value=44 Score=28.15 Aligned_cols=135 Identities=9% Similarity=0.022 Sum_probs=66.9
Q ss_pred hhhhhhhhhcCCCCCceEEEeecc-ccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeee
Q 010825 288 EETECLQWLDSKEPNSVIYVNFGS-IIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIAS 366 (500)
Q Consensus 288 ~~~~l~~~l~~~~~~~vV~vs~Gs-~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~ 366 (500)
.-.++-++|.++ ....||-|. ..- -....++....+-++|=++..... . .+... -....+++
T Consensus 33 ~A~~lg~~La~~---g~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~~-~----~~~~~----~~~~i~~~ 95 (176)
T 2iz6_A 33 MANELGKQIATH---GWILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPDT-S----EISDA----VDIPIVTG 95 (176)
T ss_dssp HHHHHHHHHHHT---TCEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECC
T ss_pred HHHHHHHHHHHC---CCEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchhh-h----hhccC----CceeEEcC
Confidence 345566777654 356666665 431 122333444455566655532100 0 01000 01133456
Q ss_pred ccchh-Hhhc-cCCcceeEeecCchhHHH---HHhcCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHH
Q 010825 367 WCPQE-EVLN-HPAIGGFFTHSGWNSTIE---SLCAGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEV 441 (500)
Q Consensus 367 ~~pq~-~lL~-~~~~~~~I~HgG~~s~~e---al~~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l 441 (500)
..+.. .++. .++. .++-=||.||.-| ++.+++|++++|.+. .....+.++.--.+. -.-+++++
T Consensus 96 ~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~-------~~~~~~e~ 164 (176)
T 2iz6_A 96 LGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVH-------VAADVAGA 164 (176)
T ss_dssp CCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEE-------EESSHHHH
T ss_pred CHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEE-------EcCCHHHH
Confidence 66653 3444 4443 5666788997655 477999999999842 111122111111111 13567777
Q ss_pred HHHHHHHhC
Q 010825 442 EKQVRELMG 450 (500)
Q Consensus 442 ~~~i~~vl~ 450 (500)
.+.+.+.+.
T Consensus 165 ~~~l~~~~~ 173 (176)
T 2iz6_A 165 IAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776553
No 164
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=37.32 E-value=14 Score=32.62 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=27.6
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcch---H----HHHHHHhCCCeEEEe
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLPF---T----VTAAQQLGLPIVLLF 151 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~---~----~~~A~~lgiP~v~~~ 151 (500)
+.+.++++++. .+||+|++|..-.. . .-+.-.+|+|+|.+.
T Consensus 91 P~~l~al~~L~-------~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLR-------TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCC-------SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcC-------CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 34445566664 28999999996653 3 334455699999973
No 165
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=36.92 E-value=62 Score=24.47 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
.++++.+... +||+||+|...+ .+..+.+.+ ++|++.++..
T Consensus 37 ~~~~~~~~~~------~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 37 EAFLAFAPDV------RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHHGGGC------CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHHhcC------CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 3444555444 899999997654 455555443 5888887554
No 166
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=36.61 E-value=2.6e+02 Score=25.84 Aligned_cols=108 Identities=16% Similarity=0.193 Sum_probs=58.9
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
.+.+|.+|.+. ...+.++.+. +..++.+...+ ++.. +......-..-+-...+++..+++.+
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------~~~~-~~~a~~~g~~~~~~~~~~l~~~~~D~ 68 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPF---------IEGA-QRLAEANGAEAVASPDEVFARDDIDG 68 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS---------HHHH-HHHHHTTTCEEESSHHHHTTCSCCCE
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC---------HHHH-HHHHHHcCCceeCCHHHHhcCCCCCE
Confidence 47788888875 2345566554 44555555422 1211 11121211333456678888444444
Q ss_pred eEeecCchh----HHHHHhcCCceee-CCcccc--hhhhHHHhhhhhcceeEe
Q 010825 382 FFTHSGWNS----TIESLCAGVPMIC-WPFLGD--QPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 382 ~I~HgG~~s----~~eal~~GvP~v~-~P~~~D--Q~~na~~~~~~~G~g~~~ 427 (500)
+|----... +.+++.+|+++++ =|+..+ +-.-...++++.|+-+.+
T Consensus 69 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 121 (344)
T 3euw_A 69 IVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVML 121 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred EEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 665444443 6678899999887 465443 333333333667777777
No 167
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=36.42 E-value=82 Score=28.97 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=47.1
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeE
Q 010825 304 VIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFF 383 (500)
Q Consensus 304 vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 383 (500)
.|+++--|-.....+....+...|+..+..+.+..+... ....+ .. .++....++ +|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~---------~~a~~-~~-----------~~~~~~~d~--vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ---------GDATK-YC-----------QEFASKVDL--II 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST---------THHHH-HH-----------HHHTTTCSE--EE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc---------chHHH-HH-----------HHhhcCCCE--EE
Confidence 455555443333345566677777777777665544221 11110 00 011123455 99
Q ss_pred eecCchhHHHHHh------cCCceeeCCc
Q 010825 384 THSGWNSTIESLC------AGVPMICWPF 406 (500)
Q Consensus 384 ~HgG~~s~~eal~------~GvP~v~~P~ 406 (500)
.-||-||+.|++. .++|+-++|.
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 9999999999864 5789999997
No 168
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=36.00 E-value=58 Score=28.80 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 010825 26 AMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 26 p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
--.++|++|+++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 46789999999999999998754
No 169
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.89 E-value=54 Score=26.12 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=21.4
Q ss_pred CeeEEEEcCCcc--hHHHHHHH-------hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ-------LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++. -++|+++++..
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 51 RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 899999997654 35555443 36888887644
No 170
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=35.81 E-value=65 Score=24.39 Aligned_cols=37 Identities=14% Similarity=0.021 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+||+++|..+.|--.-.-.+=+.+.++|.++.+-..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4689999999998777777888888999998876543
No 171
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=35.62 E-value=2.4e+02 Score=25.14 Aligned_cols=29 Identities=31% Similarity=0.366 Sum_probs=20.6
Q ss_pred CeeEEEEcCCcc----hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP----FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~----~~~~~A~~lgiP~v~~~ 151 (500)
++|.||+.+... .....+...|+|+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 889999876443 23445667899999873
No 172
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=35.31 E-value=55 Score=25.39 Aligned_cols=31 Identities=10% Similarity=0.227 Sum_probs=21.5
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+.+.+ .+|+++++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 899999998654 455555443 5788887544
No 173
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=35.03 E-value=1.8e+02 Score=26.90 Aligned_cols=41 Identities=7% Similarity=0.122 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 50 (500)
+.-|+++-.++.|-..-...||..|+..|.+|.++..+.++
T Consensus 105 ~~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r 145 (320)
T 1zu4_A 105 LNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFR 145 (320)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 34566666677899999999999999999999999876543
No 174
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=34.97 E-value=31 Score=32.40 Aligned_cols=41 Identities=10% Similarity=-0.009 Sum_probs=30.7
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
.+||+++-.|+.| ..+|..|++.||+|+++......+.+.+
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 4689999877776 4578899999999999987543344443
No 175
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=34.90 E-value=67 Score=25.46 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=34.1
Q ss_pred cCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCC
Q 010825 397 AGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGE 452 (500)
Q Consensus 397 ~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~ 452 (500)
..+|+|++--..+.......+ +.|+--.+ .+.++.++|..+|..++...
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~--~~g~~~~l-----~kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI--QDGAYDFI-----AKPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH--HTTCCEEE-----ESSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH--hcCCCeEE-----eCCCCHHHHHHHHHHHHHHH
Confidence 478888876555543333333 47776666 67799999999999998643
No 176
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=34.69 E-value=17 Score=32.82 Aligned_cols=54 Identities=13% Similarity=0.240 Sum_probs=38.1
Q ss_pred cCCcceeEeecCchhHHHHHhc---CCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCC
Q 010825 376 HPAIGGFFTHSGWNSTIESLCA---GVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGGE 452 (500)
Q Consensus 376 ~~~~~~~I~HgG~~s~~eal~~---GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~ 452 (500)
.+++ +|+-||-||+.++++. ++|++.++.. ..|.- ..+.++++.+++.+++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~Gfl---------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RLGFL---------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------SCCSS---------CCBCGGGHHHHHHHHHTTC
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CCCcc---------CcCCHHHHHHHHHHHHcCC
Confidence 4566 9999999999999887 7888876521 01111 2345788888888887754
No 177
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=34.62 E-value=45 Score=32.66 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=33.1
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 50 (500)
+.-|+++-.++.|-..-...||..|+.+|++|.++..+.++
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 34555555567799999999999999999999999876554
No 178
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=34.47 E-value=48 Score=28.92 Aligned_cols=40 Identities=18% Similarity=0.190 Sum_probs=27.7
Q ss_pred CCCc-EEEEEcCCCcCc----HHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKV-HAVCIPSPSQSH----IKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~-~il~~~~~~~GH----~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+++ +|.+++.-..+. ..-...|++.|+++|+.|..-...
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 3444 588887665542 234678889999999998776543
No 179
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=34.29 E-value=2.1e+02 Score=25.96 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=33.6
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEEEeccc
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVLLFTIS 154 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~~~ 154 (500)
..+.++++.+++. +..+|+++.... .+-.+|+..|++.+.+.+..
T Consensus 224 ~~l~~l~~~ik~~------~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~ 270 (291)
T 1pq4_A 224 QELKQLIDTAKEN------NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLA 270 (291)
T ss_dssp HHHHHHHHHHHTT------TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTC
T ss_pred HHHHHHHHHHHHc------CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCch
Confidence 4455666666655 899999998665 56778999999998875443
No 180
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=33.98 E-value=27 Score=32.54 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 010825 26 AMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 26 p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
--.++|+++.++|++|++++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 56789999999999999998754
No 181
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=33.81 E-value=53 Score=30.38 Aligned_cols=39 Identities=10% Similarity=0.098 Sum_probs=30.4
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+||+++-.|+.|- .+|..|++.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 5899998888884 46888999999999998765 455544
No 182
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=33.67 E-value=69 Score=26.82 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=24.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
++|++. |+.|- --..+++.|.++||+|+.+....
T Consensus 4 ~~ilVt--GatG~--iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQ--TGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSH--HHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcH--HHHHHHHHHHHCCCeEEEEEeCh
Confidence 566554 44453 35788999999999999987643
No 183
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=33.61 E-value=42 Score=31.63 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=20.9
Q ss_pred CeeEEEEcCCcc-hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP-FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~ 151 (500)
+||+||...... ....+.+.+|||++.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 999999875432 23345678899999874
No 184
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=33.34 E-value=2.8e+02 Score=25.24 Aligned_cols=108 Identities=8% Similarity=0.065 Sum_probs=56.6
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESS 85 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 85 (500)
.+++||+++.++. || -+.+|..+..+- ..+|..+.+....+ +.+ .....++.+..+|... ..
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~-~~~------~A~~~gIp~~~~~~~~-~~----- 150 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRE-TFS------GFDFGDIPFYHFPVNK-DT----- 150 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGG-GSC------CTTTTTCCEEECCCCT-TT-----
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChh-HHH------HHHHcCCCEEEeCCCc-cc-----
Confidence 4578999998876 44 233444444332 24676665432011 111 1222367777765321 11
Q ss_pred ccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 86 TTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
.... .+.+.+++++. ++|+||+-.+.- -...+-+.+.-.++-+.++
T Consensus 151 ------------r~~~-~~~~~~~l~~~---------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 151 ------------RRQQ-EAAITALIAQT---------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ------------HHHH-HHHHHHHHHHH---------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ------------HHHH-HHHHHHHHHhc---------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0111 23334555665 899999887643 4455556666677776444
No 185
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=33.28 E-value=20 Score=33.44 Aligned_cols=32 Identities=6% Similarity=0.127 Sum_probs=24.0
Q ss_pred hhccCCcceeEeecCchhHHHHHhc----CCceeeCCc
Q 010825 373 VLNHPAIGGFFTHSGWNSTIESLCA----GVPMICWPF 406 (500)
Q Consensus 373 lL~~~~~~~~I~HgG~~s~~eal~~----GvP~v~~P~ 406 (500)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4456677 9999999999999764 889988763
No 186
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=33.19 E-value=45 Score=30.87 Aligned_cols=39 Identities=21% Similarity=0.131 Sum_probs=24.9
Q ss_pred cccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 5 AIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++..+.++|++. |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 9 HHGSMTRSALVT--GITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ------CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cccccCCeEEEE--CCCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 344566777655 455543 577899999999999998754
No 187
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.14 E-value=70 Score=24.33 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=20.0
Q ss_pred CeeEEEEcCCcc--hHHHHHH---H----hCCCeEEEec
Q 010825 123 AVSCIISDGFLP--FTVTAAQ---Q----LGLPIVLLFT 152 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~---~----lgiP~v~~~~ 152 (500)
+||+||+|...+ .+..+.+ . -++|+++++.
T Consensus 47 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 47 PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 899999997654 3444443 2 2688888754
No 188
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.99 E-value=1.4e+02 Score=25.62 Aligned_cols=46 Identities=7% Similarity=-0.059 Sum_probs=33.2
Q ss_pred hhhhhcCCCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 010825 292 CLQWLDSKEPNSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWI 337 (500)
Q Consensus 292 l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~ 337 (500)
+.+|+..-..+.++||..+|......+.+..+.++++++|..+.++
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4557644334679999988875555667788899999999876543
No 189
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.95 E-value=22 Score=32.75 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=25.7
Q ss_pred HhhccCCcceeEeecCchhHHHHHhc----CCceeeCC
Q 010825 372 EVLNHPAIGGFFTHSGWNSTIESLCA----GVPMICWP 405 (500)
Q Consensus 372 ~lL~~~~~~~~I~HgG~~s~~eal~~----GvP~v~~P 405 (500)
++-..+++ +|.-||-||+.+++.. ++|++.++
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 34455677 9999999999999753 78988887
No 190
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=32.94 E-value=52 Score=33.55 Aligned_cols=43 Identities=9% Similarity=0.040 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 51 (500)
.+.+|++.+.++..|-....-++..|..+|++|..++..-..+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e 139 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAE 139 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999999999999999999999999999999987654443
No 191
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.93 E-value=38 Score=31.53 Aligned_cols=42 Identities=5% Similarity=0.094 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
.++||+++-.|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 46899999888877 4578899999999999943334444444
No 192
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.83 E-value=63 Score=29.80 Aligned_cols=41 Identities=7% Similarity=0.130 Sum_probs=27.7
Q ss_pred cccccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 3 SKAIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 3 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|+....++++|++. |+.|.+ -..|++.|.++||+|+.+.-.
T Consensus 4 ~~~~~~~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 4 DNAVLPEGSLVLVT--GANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCSSCTTCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CcccCCCCCEEEEE--CCccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44433555676554 444533 467899999999999988754
No 193
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=32.44 E-value=1.4e+02 Score=27.16 Aligned_cols=43 Identities=12% Similarity=0.171 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEEEec
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~ 152 (500)
..+.++++.+++. +..+|+++.... .+-.+|+..|++++.+.+
T Consensus 215 ~~l~~l~~~ik~~------~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 215 RQLKEIQDFVKEY------NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHHHT------TCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHHHc------CCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 3445556666555 899999998665 466789999999987643
No 194
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=32.35 E-value=3e+02 Score=25.24 Aligned_cols=107 Identities=11% Similarity=0.025 Sum_probs=57.7
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
.+.+|.+|.+. ...+.++.+. +..++.+...+ ++.. +......-+. +-...+++..+++-+
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------~~~~-~~~~~~~~~~-~~~~~~~l~~~~~D~ 66 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADAF---------PAAA-EAIAGAYGCE-VRTIDAIEAAADIDA 66 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS---------HHHH-HHHHHHTTCE-ECCHHHHHHCTTCCE
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCC---------HHHH-HHHHHHhCCC-cCCHHHHhcCCCCCE
Confidence 46788888775 2345556554 44555555422 1211 1112111222 566788888544444
Q ss_pred eEeecCc----hhHHHHHhcCCceee-CCccc--chhhhHHHhhhhhcceeEe
Q 010825 382 FFTHSGW----NSTIESLCAGVPMIC-WPFLG--DQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 382 ~I~HgG~----~s~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~G~g~~~ 427 (500)
++----. --+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 67 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 67 VVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 6643332 346678899999887 46543 3333333333667877777
No 195
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.24 E-value=55 Score=28.97 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=28.6
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-------hHHHHHHHhCCCeEEEe
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-------FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-------~~~~~A~~lgiP~v~~~ 151 (500)
+.+.++++++.. +||+|++|..-. -+.-+.-.+|+|+|.+.
T Consensus 95 P~ll~al~~L~~-------~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 95 PTVLAALDALPC-------PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHTSSS-------CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHhcCC-------CCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 444566666642 899999998654 24445667899999973
No 196
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=32.24 E-value=1.9e+02 Score=26.67 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=33.7
Q ss_pred chHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEEEec
Q 010825 103 LHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 103 ~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~ 152 (500)
...+.++++.+++. +..+|+++.... .+-.+|+..|++++.+.+
T Consensus 225 ~~~l~~l~~~ik~~------~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 225 AASLAKLKTYAKEH------NVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp HHHHHHHHHHTTSS------CCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHHHc------CCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 34556777777765 899999998776 467789999999876543
No 197
>1rh1_A Colicin B; FEPA, cytotoxic bacterial protein, TONB, antibiotic; 2.50A {Escherichia coli} SCOP: b.110.1.1 f.1.1.1
Probab=32.17 E-value=43 Score=32.41 Aligned_cols=43 Identities=7% Similarity=0.057 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhcCCCCCCC
Q 010825 454 GKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLSEGLIPSK 499 (500)
Q Consensus 454 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~ 499 (500)
|++|++.++++++.++. ..|...+++++-++.+.++.....+|
T Consensus 341 G~Kyk~lAkeIA~~lkn---~KGKkIRnvdDAL~sfeKyk~nlnkK 383 (511)
T 1rh1_A 341 GDKYKALSREIAENINN---FQGKTIRSYDDAMSSINKLMANPSLK 383 (511)
T ss_dssp CHHHHHHHHHHHHHHHH---CTTCCCCCHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHHHHHhh---ccCceecCHHHHHHHHHHHHhchhhc
Confidence 67799999999998876 46888899999999998888765544
No 198
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=32.11 E-value=79 Score=23.27 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=20.8
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
+||+||.|...+ .+..+.+.+ ++|.+.++..
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 899999998654 355444433 5788877543
No 199
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=32.00 E-value=88 Score=24.48 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=28.3
Q ss_pred EEcCCCcC--cHHHHHHHHHHHHhCCCEE-EEEeCCcchhh
Q 010825 15 CIPSPSQS--HIKAMLKLAKLLHHKGFHI-TFVNTEFNHRR 52 (500)
Q Consensus 15 ~~~~~~~G--H~~p~l~La~~L~~rGH~V-t~~~~~~~~~~ 52 (500)
++..+.+| .....+.+|..+.+.||+| +++...+....
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~ 46 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNN 46 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHH
Confidence 34444444 5677899999999999999 99988765543
No 200
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=32.00 E-value=2.2e+02 Score=26.48 Aligned_cols=108 Identities=13% Similarity=0.030 Sum_probs=57.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
.+.+|.+|.+. ...+.++.+. +..++.+...+ ++.. +......-+..+-...+++..+++.+
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~---------~~~~-~~~~~~~g~~~~~~~~~~l~~~~~D~ 69 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT---------EDKR-EKFGKRYNCAGDATMEALLAREDVEM 69 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS---------HHHH-HHHHHHHTCCCCSSHHHHHHCSSCCE
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC---------HHHH-HHHHHHcCCCCcCCHHHHhcCCCCCE
Confidence 47888888875 3456666665 45555555422 1211 11111111222556678885544433
Q ss_pred eEeecC----chhHHHHHhcCCceee-CCccc--chhhhHHHhhhhhcceeEe
Q 010825 382 FFTHSG----WNSTIESLCAGVPMIC-WPFLG--DQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 382 ~I~HgG----~~s~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~G~g~~~ 427 (500)
++--.- .--+.+++.+|+++++ =|+.. ++-.-...++++.|+-+.+
T Consensus 70 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 70 VIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp EEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred EEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 553333 2345677888988887 46543 3333333333667776666
No 201
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=31.89 E-value=55 Score=30.35 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=31.0
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhh
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~ 56 (500)
+||+++-.|+.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 6899998887774 57888999999999998765 3555543
No 202
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=31.80 E-value=50 Score=30.56 Aligned_cols=35 Identities=9% Similarity=0.064 Sum_probs=20.7
Q ss_pred cEEE-EEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAV-CIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il-~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
++|+ |.++|-- -..-+-.+...++++|++|++++-
T Consensus 5 ~~vL~v~AHPDD-e~l~~ggtla~~~~~G~~V~vv~l 40 (303)
T 1q74_A 5 PRLLFVHAHPDD-ESLSNGATIAHYTSRGAQVHVVTC 40 (303)
T ss_dssp CEEEEEESSTTH-HHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEEeCCch-HHHhHHHHHHHHHHCCCcEEEEEE
Confidence 3444 4444432 233344555566778999999873
No 203
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=31.68 E-value=31 Score=33.22 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=30.2
Q ss_pred ccccCCCcEEEEEcCCCcCcHHH----HHHHHHHHHhCCCEEEEEeCC
Q 010825 4 KAIACSKVHAVCIPSPSQSHIKA----MLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~p----~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++..|+|+||+++..|..+--.- -..+++.|.+.||+|+.+...
T Consensus 16 ~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 16 FQGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 44557899999999776664333 347788888889999998754
No 204
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=31.43 E-value=90 Score=30.00 Aligned_cols=35 Identities=17% Similarity=0.525 Sum_probs=26.9
Q ss_pred chhHhhccCCcceeEeecCchhHHHHHhc----CC-ceeeCC
Q 010825 369 PQEEVLNHPAIGGFFTHSGWNSTIESLCA----GV-PMICWP 405 (500)
Q Consensus 369 pq~~lL~~~~~~~~I~HgG~~s~~eal~~----Gv-P~v~~P 405 (500)
+..++-..+++ +|+=||-||+..+++. ++ |++.+.
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN 146 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFA 146 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEE
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEE
Confidence 34455667788 9999999999999654 57 687765
No 205
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=31.28 E-value=3.3e+02 Score=25.41 Aligned_cols=109 Identities=11% Similarity=0.012 Sum_probs=57.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCc-eeeeccchhHhhccCCcc
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKG-FIASWCPQEEVLNHPAIG 380 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~pq~~lL~~~~~~ 380 (500)
.+.+|.+|.+.. ..++.++.+. +..++.+...+ ++ -.+...... ...-+-...++|..+++.
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~---------~~-~~~~~a~~~~~~~~~~~~~~ll~~~~vD 70 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD---------LE-RARRVHRFISDIPVLDNVPAMLNQVPLD 70 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS---------HH-HHGGGGGTSCSCCEESSHHHHHHHSCCS
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC---------HH-HHHHHHHhcCCCcccCCHHHHhcCCCCC
Confidence 477888888752 2255666665 44555555422 11 111122222 122244567888877554
Q ss_pred eeEeecCchh----HHHHHhcCCceee-CCcccc--hhhhHHHhhhhhcceeEe
Q 010825 381 GFFTHSGWNS----TIESLCAGVPMIC-WPFLGD--QPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 381 ~~I~HgG~~s----~~eal~~GvP~v~-~P~~~D--Q~~na~~~~~~~G~g~~~ 427 (500)
+++-..-..+ +.+|+.+|+++++ =|+..+ +-.-...++++.|+-+.+
T Consensus 71 ~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 71 AVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4665444332 5667888888776 465443 333233333566666655
No 206
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=31.09 E-value=37 Score=30.26 Aligned_cols=41 Identities=17% Similarity=0.287 Sum_probs=31.5
Q ss_pred CCcEEEEEc--CCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 9 SKVHAVCIP--SPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 9 ~~~~il~~~--~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
++++++.+. -|+.|-..-...||..|+++|++|.++-.+..
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 344555554 55778999999999999999999999976543
No 207
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=31.08 E-value=63 Score=24.08 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=21.8
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
+||+||+|...+ .+..+.+.+ ++|.+.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 899999998654 355555433 58888875543
No 208
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.99 E-value=50 Score=27.47 Aligned_cols=38 Identities=11% Similarity=0.201 Sum_probs=29.9
Q ss_pred cEEEEEcCCCc--C-cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQ--S-HIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.+|+++|.-+. . =..+...|++.|.++|.+|.|...+-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 57888875433 1 45689999999999999999998754
No 209
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=30.92 E-value=66 Score=24.44 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=19.6
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
+||+||+|...+ .+..+.+.+ .+|++.++...
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 51 TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp CCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 899999997554 234443322 58888876543
No 210
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=30.90 E-value=1.2e+02 Score=23.42 Aligned_cols=37 Identities=16% Similarity=0.021 Sum_probs=24.2
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEE
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWII 338 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~ 338 (500)
+.+|+++.||........+..+...++.....+.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 4799999999753334556777777765434554443
No 211
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=30.71 E-value=3.1e+02 Score=24.98 Aligned_cols=105 Identities=10% Similarity=0.128 Sum_probs=58.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeC-Ccc-hhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNT-EFN-HRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDE 83 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~-~~~-~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~ 83 (500)
.+++||+++.++. || -+.+|..+..+- ..+|..+.+ ... ....++. ++.+..+|... ..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~-~~--- 155 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH----------GLPFRHFPITA-DT--- 155 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCCS-SC---
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCc-CC---
Confidence 5578999998776 55 344444444332 367776654 332 3333332 67777765321 11
Q ss_pred CCccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-hHHHHHHHhCCCeEEEecc
Q 010825 84 SSTTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-FTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (500)
.... .+.+.+++++. ++|+||+-.+.- -...+-+.+.-.++-+.++
T Consensus 156 --------------r~~~-~~~~~~~l~~~---------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 156 --------------KAQQ-EAQWLDVFETS---------GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp --------------HHHH-HHHHHHHHHHH---------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --------------HHHH-HHHHHHHHHHh---------CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 0011 23334555665 899999887643 4455556666677776544
No 212
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.54 E-value=25 Score=35.25 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.+|.|||++=.+.-| +.+|+.|.++|++||++.+.+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 456799988654333 578899999999999998754
No 213
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=30.53 E-value=60 Score=28.20 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.++++|++. |+.|. --..|+++|.++||+|+.+.-..
T Consensus 19 l~~~~ilVt--GatG~--iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVV--GANGK--VARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEE--TTTSH--HHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEE--CCCCh--HHHHHHHHHHhCCCeEEEEECCh
Confidence 345676655 44443 35688999999999999998643
No 214
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=30.49 E-value=70 Score=25.18 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
.++++.+... +||+||+|.... .+..+++.+ ++|+++++...
T Consensus 56 ~~al~~l~~~------~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 56 QEAIQLLEKE------SVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHTTS------CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhcc------CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
No 215
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=30.40 E-value=65 Score=32.07 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=24.9
Q ss_pred CcHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhh
Q 010825 22 SHIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLKS 56 (500)
Q Consensus 22 GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~ 56 (500)
++=.-++.+|+.|.+.|+++. ++....+.+.+.
T Consensus 32 ~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~ 64 (534)
T 4ehi_A 32 SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN 64 (534)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC
Confidence 455568899999999998864 666666777775
No 216
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=30.39 E-value=61 Score=30.24 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=21.9
Q ss_pred CeeEEEEcCCcchHHHHHHHhCCCeEEEecc
Q 010825 123 AVSCIISDGFLPFTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~ 153 (500)
+||+||..........--++.|||++.+.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 9999998754333344456789999998543
No 217
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=30.11 E-value=2.2e+02 Score=23.71 Aligned_cols=114 Identities=12% Similarity=0.097 Sum_probs=65.3
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCcee---eeccchhHhhccCCc
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFI---ASWCPQEEVLNHPAI 379 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~---~~~~pq~~lL~~~~~ 379 (500)
.+++.-.|+..... ...+++.|.+.+..+-.+++.... .-.-++.+. .+.+.++. ..|+++..+-..+|+
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~---~fi~~~~l~-~l~~~v~~~~~~~~~~hi~l~~~aD~ 79 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGR---KFINGEILK-QFCDNYYDEFEDPFLNHVDIANKHDK 79 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGG---GGSCHHHHH-HHCSCEECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHH---HHhhHHHHH-HhcCCEEecCCCCccccccccchhCE
Confidence 46666666664332 344566677777777666643221 111233332 22333332 145677777777776
Q ss_pred ceeEeecCchhHHH-------------HHhcCCceeeCCccc----c---hhhhHHHhhhhhccee
Q 010825 380 GGFFTHSGWNSTIE-------------SLCAGVPMICWPFLG----D---QPTNCRYTCNEWGVGL 425 (500)
Q Consensus 380 ~~~I~HgG~~s~~e-------------al~~GvP~v~~P~~~----D---Q~~na~~~~~~~G~g~ 425 (500)
.+|-=|-+||+.- ++..++|++++|-.. . ...|...+ .++|+=+
T Consensus 80 -~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~i 143 (175)
T 3qjg_A 80 -IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGVSI 143 (175)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTCEE
T ss_pred -EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCCEE
Confidence 5777777776543 477899999999422 2 24567777 5677644
No 218
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=29.89 E-value=65 Score=25.50 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
.++++.+... +||+||+|...+ .+..+.+.+ .+|+++++...
T Consensus 41 ~~a~~~l~~~------~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKGT------SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTTS------CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhcC------CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 219
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.82 E-value=71 Score=24.73 Aligned_cols=40 Identities=8% Similarity=0.161 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
.+.++.+... +||+||+|. .. .+..+.+.+ ++|+++++..
T Consensus 38 ~~a~~~l~~~------~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 38 QEAFTFLRRE------KIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHHTTS------CCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHhcc------CCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 3444555444 899999998 54 344444332 5888887654
No 220
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=29.69 E-value=31 Score=31.78 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
..++||.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 346799999776666 46789999999999988654
No 221
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=29.58 E-value=2.9e+02 Score=26.00 Aligned_cols=40 Identities=13% Similarity=0.202 Sum_probs=31.6
Q ss_pred cEEEEEcCC-CcCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 010825 11 VHAVCIPSP-SQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (500)
Q Consensus 11 ~~il~~~~~-~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 50 (500)
.+|+++-.. +.|-....+.|.++|.++|+++.|+.+....
T Consensus 153 k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~~~tgqtg 193 (349)
T 2obn_A 153 RRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKFLATGQTG 193 (349)
T ss_dssp EEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEECCSHHH
T ss_pred eEEEEcCCCccccceeHHHHHHHHHHhcCCcEEEEeccchh
Confidence 355555443 4589999999999999999999998876554
No 222
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=29.56 E-value=1.1e+02 Score=27.31 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=28.6
Q ss_pred cEEEEEcCCCc----------C-cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQ----------S-HIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~----------G-H~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+||+++..... | ...=++.-...|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47888776632 3 35557777889999999999999853
No 223
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=29.47 E-value=70 Score=27.28 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
+..++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3467777788888888899999999999999877754
No 224
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.45 E-value=93 Score=24.11 Aligned_cols=42 Identities=24% Similarity=0.208 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 154 (500)
.++++.+... +||+||+|.... .+..+.+.+ ++|+++++...
T Consensus 41 ~~a~~~l~~~------~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 41 AKALYQVQQA------KYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHHTTC------CCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHHhhcC------CCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
No 225
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=29.40 E-value=95 Score=28.97 Aligned_cols=78 Identities=14% Similarity=-0.061 Sum_probs=46.9
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeE
Q 010825 304 VIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFF 383 (500)
Q Consensus 304 vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 383 (500)
.|+++--+-.. +....+...++..+..+.+...... ....+ . -...+...+++ +|
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~---------~~~~~-~----------~~~~~~~~~d~--vv 87 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK---------GDAAR-Y----------VEEARKFGVAT--VI 87 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST---------THHHH-H----------HHHHHHHTCSE--EE
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc---------chHHH-H----------HHHHHhcCCCE--EE
Confidence 35555444322 4566778888888887766544211 11100 0 01122234566 99
Q ss_pred eecCchhHHHHH--------hcCCceeeCCc
Q 010825 384 THSGWNSTIESL--------CAGVPMICWPF 406 (500)
Q Consensus 384 ~HgG~~s~~eal--------~~GvP~v~~P~ 406 (500)
.-||-||+.|++ ..++|+.++|.
T Consensus 88 v~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 88 AGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp EEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 999999999985 35789888997
No 226
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=29.33 E-value=44 Score=30.97 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
+|+|+++..+ ....+++++.++||+|.++.+...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 5789998866 567899999999999999987643
No 227
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=29.25 E-value=51 Score=31.48 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCcC-c---HHHHHHHHHHH-HhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQS-H---IKAMLKLAKLL-HHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGH~Vt~~~~~ 47 (500)
.|+||+++..+..+ | +.-...+.++| .++||+|..+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 47899999866444 3 33578889999 9999999998643
No 228
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=29.20 E-value=75 Score=23.51 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=21.8
Q ss_pred CeeEEEEcCCcc--hHHHHHHH----hCCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ----LGLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 154 (500)
+||+||+|...+ .+..+++. -.+|.+.++...
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 899999997554 35544443 368888876543
No 229
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=29.00 E-value=56 Score=27.41 Aligned_cols=44 Identities=9% Similarity=0.147 Sum_probs=28.1
Q ss_pred ccccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 4 KAIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
-+|+..+.+|+++...++=.+- +..-.+.|.+.|++|+++++..
T Consensus 2 ~~m~~t~~~v~il~~~gFe~~E-~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 2 NAMGKTNNILYVMSGQNFQDEE-YFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp ---CCCCEEEEECCSEEECHHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred CccccCCCEEEEECCCCccHHH-HHHHHHHHHHCCCEEEEEECCC
Confidence 3455555566666555444433 4566778889999999999754
No 230
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=28.98 E-value=62 Score=29.29 Aligned_cols=42 Identities=10% Similarity=0.141 Sum_probs=34.2
Q ss_pred CCCcEEEEEcCC---CcCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 010825 8 CSKVHAVCIPSP---SQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (500)
Q Consensus 8 ~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 49 (500)
+..+|.+|++.+ +-|-=.-...|+..|..||++||.+--+++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 567899999988 446667788999999999999999876554
No 231
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=28.93 E-value=96 Score=24.71 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=57.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhh-hcCCCCCCCCCCeeEEeCCCCCCCCCCCCCcc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLK-SRGEHSLGGLPSFRFEAIPDGLPASSDESSTT 87 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 87 (500)
|+|++... ..+=.-++.+|+.|.+. ||+ ++.+......+.+ . ++....+-++...+
T Consensus 4 ~~ialsv~--D~dK~~~v~~a~~~~~ll~Gf~--l~AT~gTa~~L~e~~----------Gl~v~~v~k~~~eG------- 62 (134)
T 2xw6_A 4 RALALIAH--DAKKEEMVAFCQRHREVLARFP--LVATGTTGRRIEEAT----------GLTVEKLLSGPLGG------- 62 (134)
T ss_dssp CEEEEEEC--GGGHHHHHHHHHHTHHHHTTSC--EEECHHHHHHHHHHH----------CCCCEECSCGGGTH-------
T ss_pred cEEEEEEe--cccHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHhh----------CceEEEEEecCCCC-------
Confidence 46666642 34456688999999998 995 4566666677766 4 45444432111011
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCC--c--------chHHHHHHHhCCCeEEE
Q 010825 88 QDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGF--L--------PFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~--~--------~~~~~~A~~lgiP~v~~ 150 (500)
.+.+.+++++ . +.|+||.-.- . ..-..+|-.++||++..
T Consensus 63 ---------------~p~I~d~I~~---g------eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 63 ---------------DQQMGARVAE---G------RILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp ---------------HHHHHHHHHT---T------CEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred ---------------cchHHHHHHC---C------CccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 2333344443 2 8999996432 1 13567899999999973
No 232
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.69 E-value=51 Score=29.00 Aligned_cols=39 Identities=10% Similarity=0.341 Sum_probs=32.4
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEe
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~ 151 (500)
..++..++++... ++|+||.|.. +..+|+++|+|.+.+.
T Consensus 141 ee~~~~i~~l~~~------G~~vVVG~~~---~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 141 EDARGQINELKAN------GTEAVVGAGL---ITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHHHT------TCCEEEESHH---HHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHHHC------CCCEEECCHH---HHHHHHHcCCcEEEEC
Confidence 4567778888776 9999999853 6889999999999986
No 233
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.66 E-value=70 Score=24.67 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (500)
.++++.+... +||+||+|...+ .+..+.+.+ ++|+++++..
T Consensus 40 ~~a~~~l~~~------~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 40 AQALEQVARR------PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHHS------CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHhC------CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
No 234
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=28.65 E-value=61 Score=30.36 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=46.7
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeE
Q 010825 304 VIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFF 383 (500)
Q Consensus 304 vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 383 (500)
.|+++-.|-.....+....+...|+..+..+.+...... ....+ . -........++ +|
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~---------~~a~~-~----------~~~~~~~~~d~--vv 85 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI---------GDATL-E----------AERAMHENYDV--LI 85 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST---------THHHH-H----------HHHHTTTTCSE--EE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc---------chHHH-H----------HHHHhhcCCCE--EE
Confidence 355554443322335566777888877766654443211 11100 0 01122234455 99
Q ss_pred eecCchhHHHHHh------cCCceeeCCc
Q 010825 384 THSGWNSTIESLC------AGVPMICWPF 406 (500)
Q Consensus 384 ~HgG~~s~~eal~------~GvP~v~~P~ 406 (500)
.-||-||+.|++. .++|+.++|.
T Consensus 86 v~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 86 AAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 9999999999853 4689999997
No 235
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=28.55 E-value=3.3e+02 Score=24.54 Aligned_cols=29 Identities=10% Similarity=0.135 Sum_probs=21.6
Q ss_pred CeeEEEEcCCcc----hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP----FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~----~~~~~A~~lgiP~v~~~ 151 (500)
++|.||+.+... .....+...|||+|.+.
T Consensus 59 ~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 59 GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEES
T ss_pred CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEEC
Confidence 889999877553 23456778899999874
No 236
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.45 E-value=35 Score=32.58 Aligned_cols=29 Identities=24% Similarity=0.196 Sum_probs=23.3
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEE
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFV 44 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~ 44 (500)
|||+|+=-+-- -+.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpa-----Gl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIG-----GTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHH-----HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHH-----HHHHHHHHHhCCCCEEEE
Confidence 67887755533 488999999999999988
No 237
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=28.39 E-value=1.4e+02 Score=27.95 Aligned_cols=35 Identities=9% Similarity=0.165 Sum_probs=23.4
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEc
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIR 339 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~ 339 (500)
.++++++|+... ..-...++.+|.+.|+++.+...
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 467777776532 23345677888888888877764
No 238
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=28.17 E-value=63 Score=24.81 Aligned_cols=42 Identities=14% Similarity=0.313 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
.+.++.+... +||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 39 ~~al~~~~~~------~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 39 LDAMKLIEEY------NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHHHHH------CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHhhc------CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
No 239
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=28.01 E-value=95 Score=29.08 Aligned_cols=72 Identities=8% Similarity=0.098 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHH
Q 010825 316 NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESL 395 (500)
Q Consensus 316 ~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal 395 (500)
+.+..+.|.+++.....+.||...++.. -.++.++++...+-+++.+ ||-++-...++-++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 123 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNAI 123 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHHH
Confidence 3455667889998888899999876542 2355566666666666666 77777777777777
Q ss_pred h--cCCceeeCCc
Q 010825 396 C--AGVPMICWPF 406 (500)
Q Consensus 396 ~--~GvP~v~~P~ 406 (500)
+ .|++.+-=|.
T Consensus 124 ~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 124 YTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHhhCCcEEEccc
Confidence 6 4776665554
No 240
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=27.96 E-value=71 Score=24.67 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=21.7
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l----giP~v~~~~~ 153 (500)
+||+||.|...+ .+..+++.+ .+|.++++..
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 899999997554 455555544 5888877544
No 241
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=27.77 E-value=74 Score=25.43 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
..+++++..+. =+.|++.+++.|.++|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 35788877444 5899999999999999999998 544
No 242
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=27.59 E-value=55 Score=26.74 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
..+++++..+. | +.|++.+++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 45788877444 3 999999999999999999998 543
No 243
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=27.57 E-value=1.3e+02 Score=20.93 Aligned_cols=57 Identities=9% Similarity=0.099 Sum_probs=32.9
Q ss_pred CCcCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHh-CCC-CChHHHHHHHHHHHHhc
Q 010825 434 NRVSRNEVEKQVRELMGGEKGKQMRNKASKWKRFAEEAT-APD-GSSATNLEKLVNQVLLS 492 (500)
Q Consensus 434 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~-~~~-g~~~~~~~~l~~~~~~~ 492 (500)
.-.|.++|.++|+++|.+-+- ..--.+.+++.+.+.+ +.+ ......|.+.|+.+...
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL--~tvT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L~~ 68 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANL--EEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELISL 68 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCG--GGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHHHhCCH--HHHhHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHhc
Confidence 368899999999999985441 1112234444444433 222 23345667776665543
No 244
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=27.49 E-value=69 Score=29.60 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
++++|++. |+.|.+ -..|++.|.++||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 34665554 444543 57889999999999998875
No 245
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.38 E-value=77 Score=24.65 Aligned_cols=39 Identities=5% Similarity=0.202 Sum_probs=24.1
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEe
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLF 151 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~ 151 (500)
.+.++.+... +||+||+|...+ .+..+++.+ ++|+++++
T Consensus 39 ~~al~~~~~~------~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 39 INAIQIALKH------PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp HHHHHHHTTS------CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHhcC------CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 3444555443 899999997654 455555433 47777664
No 246
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=27.32 E-value=95 Score=23.72 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCcCcHHH-HHHHHHHHHhCCCEEEEEe
Q 010825 9 SKVHAVCIPSPSQSHIKA-MLKLAKLLHHKGFHITFVN 45 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~ 45 (500)
+.+||+++|..+.|+-.- ..+|-+.+.++|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 457999999999998774 6788888889999865544
No 247
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=27.28 E-value=80 Score=23.53 Aligned_cols=31 Identities=26% Similarity=0.269 Sum_probs=21.2
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l----giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++.+ .+|.+.++..
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 899999997654 455555544 5777776544
No 248
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=27.22 E-value=1e+02 Score=23.12 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-------CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-------GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (500)
.+.++.+... +||+||+|...+ .+..+.+.+ .+|.+.++..
T Consensus 39 ~~a~~~~~~~------~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 39 VDALNKLQAG------GYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHHTTC------CCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHHhc------CCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 4445555444 899999998654 455555543 4677776544
No 249
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=27.15 E-value=1e+02 Score=22.72 Aligned_cols=32 Identities=25% Similarity=0.246 Sum_probs=21.4
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 44 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 44 IPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 899999997654 355444432 58888876543
No 250
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=27.05 E-value=65 Score=27.99 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=25.8
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+|.++++.++.| --..+++.|+++|++|.++...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777766543 4578999999999999888754
No 251
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=26.96 E-value=1.8e+02 Score=26.47 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCc
Q 010825 321 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVP 400 (500)
Q Consensus 321 ~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP 400 (500)
..+++.++..+..+++..+-... +|+.|.+..+..++=. |+++ .=...|.+.+..|+..|+.
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~~i------l~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~~~G~~ 217 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYMQI------LSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAFDRGVK 217 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCCSC------CCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHhcCCCEEEhhhhhhh------CCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 45666777777777777665433 6776765544332210 1111 1123589999999999999
Q ss_pred eeeCCccc--chhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHh
Q 010825 401 MICWPFLG--DQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELM 449 (500)
Q Consensus 401 ~v~~P~~~--DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl 449 (500)
...+-.+. +..+-.-.+ . .--+.+ ...-|.++|.+.+.++-
T Consensus 218 ~~G~Tvh~v~~~~D~GpIi-~--Q~~v~i-----~~~dt~~~L~~r~~~~e 260 (288)
T 3obi_A 218 LIGATAHYVTSALDEGPII-D--QDVERI-----SHRDTPADLVRKGRDIE 260 (288)
T ss_dssp EEEEEEEECCSSTTCSCEE-E--EEEEEC-----CTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCcCCCeE-E--EEEEec-----CCCCCHHHHHHHHHHHH
Confidence 88877642 333333333 1 223444 45678888888776553
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=26.91 E-value=35 Score=27.11 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+.||+++-.+..| ..+++.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4578888655444 578999999999999998754
No 253
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=26.77 E-value=63 Score=28.96 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=24.8
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
+.++++.++.| --..+++.|+++|++|.++..
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 46677755543 467899999999999998875
No 254
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=26.52 E-value=60 Score=29.78 Aligned_cols=33 Identities=9% Similarity=-0.072 Sum_probs=23.7
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+|++. |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 55554 455544 5678899999999999887543
No 255
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=26.47 E-value=1.8e+02 Score=26.46 Aligned_cols=103 Identities=11% Similarity=0.058 Sum_probs=59.7
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCc
Q 010825 321 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVP 400 (500)
Q Consensus 321 ~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP 400 (500)
..+++.++..+..+++..+-... +|+.|.+..+..++=. |+++ .=...|.+.+..|+.+|+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagym~i------l~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~k 216 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYMQI------LSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPYHQAHTRGVK 216 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC------CCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCEEEhhhhhhh------cCHHHHhhccCCeEEE----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 34666666666777777655432 6676665544332210 1111 1113589999999999999
Q ss_pred eeeCCccc--chhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHh
Q 010825 401 MICWPFLG--DQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELM 449 (500)
Q Consensus 401 ~v~~P~~~--DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl 449 (500)
...+-.+. +..+-.-.+ . .--+.+ ...-|.++|.+.+.++-
T Consensus 217 ~tG~Tvh~v~~~lD~GpIi-~--Q~~v~i-----~~~dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 217 LIGATAHFVTADLDEGPII-A--QDVEHV-----SHRDSAEDLVRKGRDIE 259 (287)
T ss_dssp EEEEEEEECCSSSSCCCEE-E--EEEEEC-----CTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEEECCCCcCCCEE-E--EEEEec-----CCCCCHHHHHHHHHHHH
Confidence 98877642 233333333 1 223444 45678888888776553
No 256
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=26.46 E-value=84 Score=26.43 Aligned_cols=42 Identities=24% Similarity=0.445 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
.+.++.+... +||+||+|...+ .+..+++.+ ++|+++++...
T Consensus 38 ~~al~~~~~~------~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 86 (208)
T 1yio_A 38 STFLEHRRPE------QHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG 86 (208)
T ss_dssp HHHHHHCCTT------SCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred HHHHHhhhcc------CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
No 257
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=26.40 E-value=1.2e+02 Score=22.89 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=25.8
Q ss_pred CcHHHHHHHHHHHHhC-CC-EEEEEeCCcchhhh
Q 010825 22 SHIKAMLKLAKLLHHK-GF-HITFVNTEFNHRRF 53 (500)
Q Consensus 22 GH~~p~l~La~~L~~r-GH-~Vt~~~~~~~~~~v 53 (500)
......+.+|..+.+. || +|+++...+....+
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 4567789999999999 99 99999887765443
No 258
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=26.40 E-value=63 Score=24.67 Aligned_cols=38 Identities=3% Similarity=-0.005 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEe
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVN 45 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 45 (500)
.+++||+++|..+.|--.-.-.+=+...++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 45789999999988766655555566666898888865
No 259
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=26.39 E-value=43 Score=31.52 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+||+++-.|..|. .+|..|++.||+|+++...
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 47999997766663 4788899999999988653
No 260
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=26.23 E-value=71 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
..++|.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 45799999888887 56889999999999988654
No 261
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.11 E-value=98 Score=23.68 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc-------hHHHHHHHh-----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP-------FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~-------~~~~~A~~l-----giP~v~~~~~~ 154 (500)
.++++.+... +||+||+|.... .+..+.+.+ ++|+++++...
T Consensus 37 ~~a~~~l~~~------~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 37 VSLSTVLREE------NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHHS------CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHHcC------CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
No 262
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=26.10 E-value=1e+02 Score=28.55 Aligned_cols=48 Identities=15% Similarity=0.040 Sum_probs=27.3
Q ss_pred hhhhhhhhcCCCCCceEEEeeccc---cccCHHHHHHHHHHHHhCCCCEEEEEc
Q 010825 289 ETECLQWLDSKEPNSVIYVNFGSI---IIMNKQQLIEVAMGLVNSNHPFLWIIR 339 (500)
Q Consensus 289 ~~~l~~~l~~~~~~~vV~vs~Gs~---~~~~~~~~~~l~~al~~~~~~~v~~~~ 339 (500)
-+++.++++..+-+++ -+|+. .......+..+.+.+++.+..+++=.+
T Consensus 126 ~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 126 VKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 3457777754322333 33443 234455677888888888776655443
No 263
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.03 E-value=95 Score=23.11 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=20.9
Q ss_pred CeeEEEEcCCcc--hHHHHHHH----hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ----LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~----lgiP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++. -++|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 47 DINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 899999998654 35554443 36777776544
No 264
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=25.96 E-value=67 Score=28.63 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=31.0
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.|+|..-|+.|-..-...||..|+++|++|.++-.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 466667788899999999999999999999998654
No 265
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=25.95 E-value=88 Score=23.85 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=20.7
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
+||+||.|...+ .+..+.+.+ ++|+++++..
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 47 FFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 899999997554 355444432 5788777544
No 266
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.86 E-value=1.8e+02 Score=24.22 Aligned_cols=83 Identities=11% Similarity=-0.047 Sum_probs=48.3
Q ss_pred ceEEEeecccc---ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCc
Q 010825 303 SVIYVNFGSII---IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAI 379 (500)
Q Consensus 303 ~vV~vs~Gs~~---~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~ 379 (500)
.+-.++.|+.. ...+.--..+...+...|..+.+...-+. .++...+.+ ...+..+|+
T Consensus 5 ~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~D-------d~~~I~~~l------------~~a~~~~Dl 65 (172)
T 3kbq_A 5 NASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMD-------DLDEIGWAF------------RVALEVSDL 65 (172)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECS-------CHHHHHHHH------------HHHHHHCSE
T ss_pred EEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCC-------CHHHHHHHH------------HHHHhcCCE
Confidence 35677788763 22333344566777888887765532111 112221111 223445788
Q ss_pred ceeEeecCch-----hHHHHHh--cCCceeeCCc
Q 010825 380 GGFFTHSGWN-----STIESLC--AGVPMICWPF 406 (500)
Q Consensus 380 ~~~I~HgG~~-----s~~eal~--~GvP~v~~P~ 406 (500)
+||-||.| -+.|++. +|++++..|-
T Consensus 66 --VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 66 --VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp --EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred --EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 99999988 3567764 6888877665
No 267
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=25.84 E-value=57 Score=30.22 Aligned_cols=29 Identities=10% Similarity=0.346 Sum_probs=20.8
Q ss_pred CeeEEEEcCCcc-hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP-FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~ 151 (500)
+||+||...... ....--++.|||++.+.
T Consensus 84 ~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 84 KPDVVFVTNYAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp CCSEEEEETTCCHHHHHHHHTTTCCEEEEC
T ss_pred CCCEEEEeCCCChHHHHHHHHcCCCEEEEe
Confidence 999999875433 23344467899999874
No 268
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=25.80 E-value=47 Score=31.15 Aligned_cols=39 Identities=3% Similarity=0.205 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCcCcHH----HHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIK----AMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+|+||+++..+..+-.. -...++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 47899999854333222 4567889999999999988653
No 269
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=25.78 E-value=68 Score=28.55 Aligned_cols=40 Identities=23% Similarity=0.217 Sum_probs=28.0
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc-------hHHHHHHHhCCCeEEE
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGFLP-------FTVTAAQQLGLPIVLL 150 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~-------~~~~~A~~lgiP~v~~ 150 (500)
+.+.++++++.. +||+|++|..-. -+.-+.-.+|+|+|.+
T Consensus 97 P~ll~al~~L~~-------~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLET-------EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCSS-------CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCC-------CCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 444566677642 899999998554 2344556788999997
No 270
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=25.78 E-value=92 Score=28.10 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCCCCCCCCeeEEEEcCCcc------hHHHHHHHhCCCeEEEec
Q 010825 105 PFLDLLAKLNDSSNSVNPAVSCIISDGFLP------FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 105 ~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~------~~~~~A~~lgiP~v~~~~ 152 (500)
.+.+++++. +||+||+-.-.. -+..+|.+||+|.+....
T Consensus 103 ~La~~i~~~---------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 103 ILTEVIKKE---------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHH---------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhc---------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 345556665 899999876442 588999999999998643
No 271
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=25.77 E-value=37 Score=32.21 Aligned_cols=39 Identities=5% Similarity=0.142 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCcCcH----HHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHI----KAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.|+||+++..+..+-. .-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4789999985544322 23477889999999999988753
No 272
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.73 E-value=82 Score=24.15 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=21.6
Q ss_pred CeeEEEEcCCcc---hHHHHHHH----hCCCeEEEeccc
Q 010825 123 AVSCIISDGFLP---FTVTAAQQ----LGLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~---~~~~~A~~----lgiP~v~~~~~~ 154 (500)
+||+||+|.... .+..+.+. .++|+++++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 899999997542 34444443 479999886543
No 273
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=25.67 E-value=1.1e+02 Score=23.90 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=21.2
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
+||+||+|.... .+..+.+.+ ++|+++++...
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 51 TPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 899999997554 344444332 68888876543
No 274
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=25.61 E-value=55 Score=29.10 Aligned_cols=30 Identities=10% Similarity=-0.067 Sum_probs=20.9
Q ss_pred CeeEEEEcCCcc-hHHHHHHHhCCCeEEEec
Q 010825 123 AVSCIISDGFLP-FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 123 ~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~ 152 (500)
+||+||...... .....-+++|||++.+..
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 999999865322 234455678999998743
No 275
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.50 E-value=76 Score=28.61 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=26.0
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
-|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777766654 4678999999999999888754
No 276
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=25.49 E-value=1.4e+02 Score=28.01 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=69.9
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 302 NSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 302 ~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
+.+-.+.+|.+. +.++..+...+.+++.. ... ..+... . ....+.+..++|+.+|+
T Consensus 142 ~tvGIiG~G~IG-------~~va~~~~~fg~~v~~~-d~~--------~~~~~~---~---~~~~~~~l~ell~~sDi-- 197 (334)
T 3kb6_A 142 LTLGVIGTGRIG-------SRVAMYGLAFGMKVLCY-DVV--------KREDLK---E---KGCVYTSLDELLKESDV-- 197 (334)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEE-CSS--------CCHHHH---H---TTCEECCHHHHHHHCSE--
T ss_pred cEEEEECcchHH-------HHHHHhhcccCceeeec-CCc--------cchhhh---h---cCceecCHHHHHhhCCE--
Confidence 357788899886 45666666777776543 211 111111 1 12345677899999997
Q ss_pred eEeecCchhHHHHHhcCCceeeCCccc--chhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHH
Q 010825 382 FFTHSGWNSTIESLCAGVPMICWPFLG--DQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRE 447 (500)
Q Consensus 382 ~I~HgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~ 447 (500)
++-|+ |+.. ....|+..+ +.+.=|..++|-.|..-+++++|.++++.
T Consensus 198 vslh~------------------Plt~~T~~li~~~~l-~~mk~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 198 ISLHV------------------PYTKETHHMINEERI-SLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp EEECC------------------CCCTTTTTCBCHHHH-HHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EEEcC------------------CCChhhccCcCHHHH-hhcCCCeEEEecCccccccHHHHHHHHHh
Confidence 66554 6644 467788888 67888887778777778999999999873
No 277
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=25.37 E-value=31 Score=29.58 Aligned_cols=44 Identities=7% Similarity=0.045 Sum_probs=33.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHhcCCCCC
Q 010825 451 GEKGKQMRNKASKWKRFAEEATAPDGSSATNLEKLVNQVLLSEGLIP 497 (500)
Q Consensus 451 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~ 497 (500)
+.-|++|++.++++++.+++ ..|...+.+++-++.+.++.....
T Consensus 28 e~~G~Ky~~~A~eiA~~l~~---~kGKkIRs~~dAl~s~eK~k~nln 71 (204)
T 1col_A 28 EHLGDKYKAIAKDIADNIKN---FQGKTIRSFDDAMASLNKITANPA 71 (204)
T ss_dssp HHHCHHHHHHHHHHHHHHHT---CTTCCCCCHHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHH---hcCCccCCHHHHHHHHHHHhhChh
Confidence 33367899999999999975 467778888888888888766443
No 278
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=25.30 E-value=87 Score=26.53 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=28.8
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
..++++..+..|...-+..+++.|+++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 456667777777777889999999999999877654
No 279
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=25.30 E-value=1.8e+02 Score=26.26 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=32.0
Q ss_pred chHHHHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHhCCCeEEEe
Q 010825 103 LHPFLDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 103 ~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~ 151 (500)
...+.++++.+++. +..+|+++.... .+-.+|+..|++++.+.
T Consensus 212 ~~~l~~l~~~ik~~------~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 212 PRQLTEIQEFVKTY------KVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp SHHHHHHHHHHHHT------TCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred HHHHHHHHHHHHHc------CCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 34455666666655 889999998665 46778999999998763
No 280
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=25.25 E-value=72 Score=27.90 Aligned_cols=34 Identities=3% Similarity=0.076 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.|.++++..+.| --..+++.|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 355666655443 4678999999999999988653
No 281
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=25.17 E-value=71 Score=28.58 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+.++++++.++.| --..+|++|+++|++|.+...
T Consensus 24 ~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 24 SDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 34577888866553 467899999999999987743
No 282
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=25.05 E-value=2.9e+02 Score=25.72 Aligned_cols=109 Identities=13% Similarity=-0.038 Sum_probs=56.7
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
.+.+|.+|.+.. ..++.++... +..++.+.... ++.. +......-+..+-...++|..+++.+
T Consensus 29 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~---------~~~~-~~~a~~~g~~~~~~~~~ll~~~~~D~ 92 (350)
T 3rc1_A 29 RVGVIGCADIAW------RRALPALEAEPLTEVTAIASRR---------WDRA-KRFTERFGGEPVEGYPALLERDDVDA 92 (350)
T ss_dssp EEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESS---------HHHH-HHHHHHHCSEEEESHHHHHTCTTCSE
T ss_pred EEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCC---------HHHH-HHHHHHcCCCCcCCHHHHhcCCCCCE
Confidence 478888888752 1355666655 44555554422 1111 11121112223455678887655444
Q ss_pred eEeecC----chhHHHHHhcCCceee-CCccc--chhhhHHHhhhhhcceeEe
Q 010825 382 FFTHSG----WNSTIESLCAGVPMIC-WPFLG--DQPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 382 ~I~HgG----~~s~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~G~g~~~ 427 (500)
++--.- .--+.+|+.+|+++++ =|+.. ++-.-...++++.|+-+.+
T Consensus 93 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 145 (350)
T 3rc1_A 93 VYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLME 145 (350)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 554222 2245677888988776 46544 3333333333566766666
No 283
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.93 E-value=46 Score=26.29 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
++|+++-. |. --..+++.|.++||+|+++....
T Consensus 7 ~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECCH
Confidence 47777744 44 35789999999999999987643
No 284
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=24.82 E-value=1e+02 Score=25.45 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=35.5
Q ss_pred cccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 5 AIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
...+++..|++.-.++.|-..-...|++.|..+|+.|.++..+
T Consensus 8 ~~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d 50 (186)
T 2yvu_A 8 KCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGD 50 (186)
T ss_dssp CCCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred cccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHH
Confidence 3345667888888889999999999999999999999887643
No 285
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.82 E-value=82 Score=24.86 Aligned_cols=41 Identities=24% Similarity=0.335 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
.+++..+... +||+||+|.... .+..+.+.+ ++|+++++..
T Consensus 37 ~~a~~~l~~~------~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (155)
T 1qkk_A 37 TEALAGLSAD------FAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGH 84 (155)
T ss_dssp HHHHHTCCTT------CCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECG
T ss_pred HHHHHHHHhC------CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECC
Confidence 4445555444 899999997554 344444432 6898887654
No 286
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.67 E-value=3.6e+02 Score=23.67 Aligned_cols=29 Identities=14% Similarity=0.032 Sum_probs=20.5
Q ss_pred CeeEEEEcCCcc----hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP----FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~----~~~~~A~~lgiP~v~~~ 151 (500)
++|.||+.+... .....+...|+|+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 61 KPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEeCCChhhhHHHHHHHHHCCCcEEEec
Confidence 889999876542 23445667799999873
No 287
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.56 E-value=62 Score=26.80 Aligned_cols=42 Identities=12% Similarity=-0.002 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHH-----hCCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQ-----LGLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 154 (500)
.+.++.+... +||+||+|...+ .|..+++. -++|+++++...
T Consensus 41 ~~al~~~~~~------~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 41 DEALKLAGAE------KFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHTTS------CCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHhhC------CCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3444555444 899999997654 34444433 258888776543
No 288
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.48 E-value=87 Score=27.82 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=25.5
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+.++++.++.| --..+|+.|+++|++|.++...
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 67777766543 4678899999999999887654
No 289
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=24.32 E-value=50 Score=29.86 Aligned_cols=44 Identities=9% Similarity=0.139 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHH--------HHhC-CCEEEEEeCCcchhh
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKL--------LHHK-GFHITFVNTEFNHRR 52 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-GH~Vt~~~~~~~~~~ 52 (500)
.+.+|++.+.++-.|-....-++.. |.++ |++|..+...-..+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~ 171 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANED 171 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHH
Confidence 4679999999999999999999987 9999 999999887544443
No 290
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=24.26 E-value=1.2e+02 Score=28.19 Aligned_cols=43 Identities=7% Similarity=-0.055 Sum_probs=30.0
Q ss_pred CccccccCCCcEEEEEcCCCcCcHHHHHHHHHHHHh--CCCEEEEEeCC
Q 010825 1 MESKAIACSKVHAVCIPSPSQSHIKAMLKLAKLLHH--KGFHITFVNTE 47 (500)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~--rGH~Vt~~~~~ 47 (500)
|..|.+...+++|++. |+.|- --..|++.|.+ +||+|+.+.-.
T Consensus 1 M~~~~~~~~~~~vlVT--GatG~--IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 1 MRYIDDELENQTILIT--GGAGF--VGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCSSSCCCTTCEEEEE--TTTSH--HHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CcccchhcCCCEEEEE--CCCCH--HHHHHHHHHHhhCCCCeEEEEECC
Confidence 5566655666777665 33342 34678999999 99999998753
No 291
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=24.20 E-value=1.1e+02 Score=23.07 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=19.6
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh------CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL------GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l------giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+.+.+ ..|.+++.+.
T Consensus 50 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 50 EPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp CCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 899999998655 355555443 3455555433
No 292
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.14 E-value=1e+02 Score=23.75 Aligned_cols=31 Identities=19% Similarity=0.190 Sum_probs=20.4
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+.+.+ .+|.++++..
T Consensus 44 ~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 44 WVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp CEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 899999998654 355544433 4677776543
No 293
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.08 E-value=71 Score=28.81 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+.|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 22 ~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 22 SRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ---CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34577888876654 4578999999999999887653
No 294
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=23.98 E-value=1.1e+02 Score=25.41 Aligned_cols=38 Identities=18% Similarity=0.125 Sum_probs=28.8
Q ss_pred cCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCC--EEEEEe
Q 010825 7 ACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGF--HITFVN 45 (500)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH--~Vt~~~ 45 (500)
+.++.+|.++. ++.|++.-+-..++.|.+-|. +|.+++
T Consensus 9 ~~~~P~V~Iim-GS~SD~~v~~~a~~~l~~~gi~~ev~V~s 48 (173)
T 4grd_A 9 THSAPLVGVLM-GSSSDWDVMKHAVAILQEFGVPYEAKVVS 48 (173)
T ss_dssp CCSSCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCeEEEEe-CcHhHHHHHHHHHHHHHHcCCCEEEEEEc
Confidence 35556777776 999999999999999998883 444443
No 295
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=23.93 E-value=1.4e+02 Score=21.71 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+..+|+++|.. | ......+..|.+.||+|..+..
T Consensus 54 ~~~~~ivvyC~~--g--~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 54 NDNETYYIICKA--G--GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp CTTSEEEEECSS--S--HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCcEEEEcCC--C--chHHHHHHHHHHCCCCEEEecc
Confidence 344688888844 3 3466788899999998876644
No 296
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.89 E-value=86 Score=27.92 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=26.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
-|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777766654 4678999999999999888653
No 297
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.85 E-value=67 Score=29.95 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+||.|+-.++.| +..+|+.|.++||+|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 3589999988877 557999999999999998653
No 298
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.82 E-value=83 Score=24.29 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=20.6
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++.+ .+|+++++..
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 899999997654 455555443 4677776544
No 299
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.82 E-value=55 Score=29.57 Aligned_cols=32 Identities=6% Similarity=-0.037 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 478887766666 46889999999999998654
No 300
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=23.72 E-value=1.4e+02 Score=20.70 Aligned_cols=27 Identities=15% Similarity=0.287 Sum_probs=21.8
Q ss_pred CCcCHHHHHHHHHHHhCCC-hhHHHHHHHHH
Q 010825 434 NRVSRNEVEKQVRELMGGE-KGKQMRNKASK 463 (500)
Q Consensus 434 ~~~~~~~l~~~i~~vl~~~-~~~~~~~~a~~ 463 (500)
+..++++|..||..|.++. + +...++.
T Consensus 12 r~Yte~~L~~Ai~aVr~g~mS---~~~Aak~ 39 (70)
T 2cob_A 12 RQYNSEILEEAISVVMSGKMS---VSKAQSI 39 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSSC---HHHHHHH
T ss_pred cccCHHHHHHHHHHHHcCCcc---HHHHHHH
Confidence 5799999999999999884 6 6666554
No 301
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=23.71 E-value=42 Score=31.03 Aligned_cols=35 Identities=14% Similarity=0.168 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
...++|.|+-.+..|. .+|+.|++.||+|+++...
T Consensus 7 ~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 3457899997766664 6889999999999988543
No 302
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=23.69 E-value=1.1e+02 Score=27.07 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=23.8
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+.++++.++ |- --..+++.|+++|++|.++...
T Consensus 13 k~vlVTGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 13 LVAVITGGA-SG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455566444 32 3678999999999999988753
No 303
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.67 E-value=84 Score=24.14 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=25.8
Q ss_pred HHHHHHhhc-CCCCCCCCeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEe
Q 010825 107 LDLLAKLND-SSNSVNPAVSCIISDGFLP--FTVTAAQQL-----GLPIVLLF 151 (500)
Q Consensus 107 ~~ll~~l~~-~~~~~~~~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~ 151 (500)
.+.++.+.. . +||+||+|.... .+..+.+.+ ++|+++++
T Consensus 49 ~~al~~l~~~~------~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 49 SAFFQHRSQLS------TCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHTGGGGG------SCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHhCC------CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 455555554 4 899999997654 466666654 47777764
No 304
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=23.62 E-value=3.1e+02 Score=22.62 Aligned_cols=143 Identities=8% Similarity=0.020 Sum_probs=74.5
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCccee
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGF 382 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 382 (500)
|.|-|-+||.+ +....++....++..+..+-..+-+-.. .|+.+.+... -+....++.+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR------tp~~l~~~~~-------------~~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR------TPDKMFDYAE-------------TAKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT------CHHHHHHHHH-------------HTTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC------CHHHHHHHHH-------------HHHhCCCcEE
Confidence 45667777775 4556677777888888876555544332 4443322110 0111123348
Q ss_pred EeecCchhHH---HHHhcCCceeeCCcccchh-hhHHHh--hh-hhcceeEeeeCCCC--CCcCHHHHHHHHHHHhCCCh
Q 010825 383 FTHSGWNSTI---ESLCAGVPMICWPFLGDQP-TNCRYT--CN-EWGVGLEIINGGDD--NRVSRNEVEKQVRELMGGEK 453 (500)
Q Consensus 383 I~HgG~~s~~---eal~~GvP~v~~P~~~DQ~-~na~~~--~~-~~G~g~~~~~~~~~--~~~~~~~l~~~i~~vl~~~~ 453 (500)
|.=.|...-. =|-..-+|+|.+|.-.... .....+ ++ =.|+++..-+ -+ ...++..+...|.. +.|+.
T Consensus 65 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~--I~~ag~~nAa~lAa~Il~-~~d~~ 141 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFA--IGMAGAKNAALFAASILQ-HTDIN 141 (166)
T ss_dssp EEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECC--STHHHHHHHHHHHHHHHG-GGCHH
T ss_pred EEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEe--cCCccchHHHHHHHHHHc-CCCHH
Confidence 8777754222 2334578999999843211 111111 01 1244333300 01 13455555555432 34665
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q 010825 454 GKQMRNKASKWKRFAEEAT 472 (500)
Q Consensus 454 ~~~~~~~a~~l~~~~~~~~ 472 (500)
++++.+++++.+++..
T Consensus 142 ---l~~kl~~~r~~~~~~v 157 (166)
T 3oow_A 142 ---IAKALAEFRAEQTRFV 157 (166)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 8999999998888643
No 305
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=23.52 E-value=1.7e+02 Score=24.97 Aligned_cols=139 Identities=8% Similarity=-0.065 Sum_probs=75.3
Q ss_pred ceEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeec-----cchhHhhcc
Q 010825 303 SVIYVNFGSII-IMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASW-----CPQEEVLNH 376 (500)
Q Consensus 303 ~vV~vs~Gs~~-~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-----~pq~~lL~~ 376 (500)
.+++.-.|+.. ....+ +++.|.+.+..+-.+++.... .-.-++.+ +.+.++++..-| +.|..+...
T Consensus 10 ~IllgvTGs~aa~k~~~----l~~~L~~~g~~V~vv~T~~A~---~fi~~~~~-~~l~~~v~~~~~~~~~~~~hi~l~~~ 81 (194)
T 1p3y_1 10 KLLIGICGSISSVGISS----YLLYFKSFFKEIRVVMTKTAE---DLIPAHTV-SYFCDHVYSEHGENGKRHSHVEIGRW 81 (194)
T ss_dssp EEEEEECSCGGGGGTHH----HHHHHTTTSSEEEEEECHHHH---HHSCHHHH-GGGSSEEECTTCSSSCCCCHHHHHHH
T ss_pred EEEEEEECHHHHHHHHH----HHHHHHHCCCEEEEEEchhHH---HHHHHHHH-HHhcCCEeccccccCCCcCccccccc
Confidence 45555566654 33333 445555566666555432110 00012222 223344332212 445666666
Q ss_pred CCcceeEeecCchhHHHH-------------HhcCCceeeCCccc----ch---hhhHHHhhhhhcceeEeeeCC-----
Q 010825 377 PAIGGFFTHSGWNSTIES-------------LCAGVPMICWPFLG----DQ---PTNCRYTCNEWGVGLEIINGG----- 431 (500)
Q Consensus 377 ~~~~~~I~HgG~~s~~ea-------------l~~GvP~v~~P~~~----DQ---~~na~~~~~~~G~g~~~~~~~----- 431 (500)
+|+ .+|.=|-+||+.-. +..++|++++|-.. .. ..|...+ .++|+=+.-+.-+
T Consensus 82 aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~iv~p~~g~~f~l 159 (194)
T 1p3y_1 82 ADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQL-RKDGHIVIEPVEIMAFEI 159 (194)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHH-HHHTCEECCCBCCC----
T ss_pred CCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHH-HHCCCEEECCCCCccccc
Confidence 775 57777777765543 56789999999632 22 4567777 5678754432222
Q ss_pred ------C-CCCcCHHHHHHHHHHHhCC
Q 010825 432 ------D-DNRVSRNEVEKQVRELMGG 451 (500)
Q Consensus 432 ------~-~~~~~~~~l~~~i~~vl~~ 451 (500)
. .+-.+.++|.+.+.+.+.+
T Consensus 160 acg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 160 ATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp --------CBCCCHHHHHHHHHHHCC-
T ss_pred ccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 1 1235789999999888864
No 306
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=23.50 E-value=1.2e+02 Score=23.45 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=29.5
Q ss_pred cEEEEEcCCCcCcH--HHHHHHHHHHHhCC--CEEEEEeCCcchh
Q 010825 11 VHAVCIPSPSQSHI--KAMLKLAKLLHHKG--FHITFVNTEFNHR 51 (500)
Q Consensus 11 ~~il~~~~~~~GH~--~p~l~La~~L~~rG--H~Vt~~~~~~~~~ 51 (500)
+|++|+-.-..-.. +-.+..|....++| |+|.++.-....+
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 67777765543222 34778888888999 8999999877655
No 307
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=23.46 E-value=3.7e+02 Score=24.68 Aligned_cols=63 Identities=10% Similarity=0.043 Sum_probs=39.8
Q ss_pred eeccchhHhhccCCcceeEeecCchh----HHHHHhcCCceee-CCcccc--hhhhHHHhhhhhcce--eEe
Q 010825 365 ASWCPQEEVLNHPAIGGFFTHSGWNS----TIESLCAGVPMIC-WPFLGD--QPTNCRYTCNEWGVG--LEI 427 (500)
Q Consensus 365 ~~~~pq~~lL~~~~~~~~I~HgG~~s----~~eal~~GvP~v~-~P~~~D--Q~~na~~~~~~~G~g--~~~ 427 (500)
.-|-+..++|..+++-+++-..-..+ +.+|+.+|+++++ =|+..+ +-.-...++++.|+- +.+
T Consensus 54 ~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v 125 (337)
T 3ip3_A 54 KKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTA 125 (337)
T ss_dssp EECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEE
T ss_pred cccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEe
Confidence 34556788998765544664444333 7788999999887 587654 433333444667766 555
No 308
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.45 E-value=4.4e+02 Score=24.47 Aligned_cols=107 Identities=12% Similarity=0.074 Sum_probs=57.0
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 381 (500)
.+.+|.+|.+.. ..+.++... +.+++.+.... ++.. +.. ...-+.-+-+..++|..+++.+
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~---------~~~~-~~a-~~~g~~~~~~~~~ll~~~~~D~ 68 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDIL---------AEKR-EAA-AQKGLKIYESYEAVLADEKVDA 68 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSS---------HHHH-HHH-HTTTCCBCSCHHHHHHCTTCCE
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCC---------HHHH-HHH-HhcCCceeCCHHHHhcCCCCCE
Confidence 478888888752 334455555 44555554321 1211 111 1111233456678888655544
Q ss_pred eEeecCch----hHHHHHhcCCceee-CCcccc--hhhhHHHhhhhhcceeEe
Q 010825 382 FFTHSGWN----STIESLCAGVPMIC-WPFLGD--QPTNCRYTCNEWGVGLEI 427 (500)
Q Consensus 382 ~I~HgG~~----s~~eal~~GvP~v~-~P~~~D--Q~~na~~~~~~~G~g~~~ 427 (500)
++--.-.. -+.+|+.+|+++++ =|+..+ +-.-...++++.|+-+.+
T Consensus 69 V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 121 (359)
T 3e18_A 69 VLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMV 121 (359)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 66444433 35677888988887 565433 333333333566766665
No 309
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=23.38 E-value=1.7e+02 Score=25.28 Aligned_cols=94 Identities=20% Similarity=0.163 Sum_probs=50.4
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcchhhhhhhcCCCCCCCCCCeeEEeCCCCCCCCCCCCCccccHHHHHHHHHHhccchHH
Q 010825 27 MLKLAKLLHHKGFHITFVNTEFNHRRFLKSRGEHSLGGLPSFRFEAIPDGLPASSDESSTTQDMYSLCESIMNNVMLHPF 106 (500)
Q Consensus 27 ~l~La~~L~~rGH~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (500)
...+.+.|.++|..+.+++.......+.+..+- ..-+.+....+..... ..+. ..+
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl-----~~~fd~i~~~~~~~~~------KP~p-------------~~~ 155 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAALEL-----REFFTFCADASQLKNS------KPDP-------------EIF 155 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTC-----GGGCSEECCGGGCSSC------TTST-------------HHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhhhh-----ccccccccccccccCC------CCcH-------------HHH
Confidence 456778899999999888876554443333110 0012222221111111 1121 122
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcchHHHHHHHhCCCeEEEe
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLPFTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~ 151 (500)
...++.+.-. +=++|+++-. ......|+..|+++|.+.
T Consensus 156 ~~a~~~lg~~------p~e~l~VgDs-~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 156 LAACAGLGVP------PQACIGIEDA-QAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHHHHHTSC------GGGEEEEESS-HHHHHHHHHHTCEEEEES
T ss_pred HHHHHHcCCC------hHHEEEEcCC-HHHHHHHHHcCCEEEEEC
Confidence 3334444221 2266666543 578999999999999873
No 310
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=23.38 E-value=59 Score=27.97 Aligned_cols=33 Identities=6% Similarity=0.148 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+++|.++-.+..| ..+|..|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 45789988766666 5678999999999998864
No 311
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.27 E-value=1e+02 Score=26.64 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=23.6
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+.++++.++ |- --..+++.|+++||+|+++...
T Consensus 6 k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGAS-RG--IGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEECC
Confidence 345565443 42 3578999999999999988754
No 312
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.11 E-value=87 Score=27.42 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=29.4
Q ss_pred CcEEEEEcCC--CcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 10 KVHAVCIPSP--SQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 10 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
||+.+|++.. ..|-..-...|++.|+++|++|.++=+
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4555555544 558999999999999999999999753
No 313
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=23.09 E-value=71 Score=27.67 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=25.5
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
..+++.+|..|+..-+..++..|.++|++|..+-.
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 34444556666666677899999999999877754
No 314
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=23.00 E-value=76 Score=29.22 Aligned_cols=40 Identities=15% Similarity=-0.014 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCcc-hhhhhh
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEFN-HRRFLK 55 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~-~~~v~~ 55 (500)
+|||+++-.|+.|- .+|..|+ .||+|+++..... .+.+.+
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~ 42 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQS 42 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHh
Confidence 47899998888875 5678888 9999999987653 344544
No 315
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=22.95 E-value=80 Score=28.66 Aligned_cols=37 Identities=11% Similarity=0.264 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.+.|+++++.++.| --..+|+.|+++|++|.++.-..
T Consensus 10 ~~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 10 TKRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp --CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 34578888876654 45689999999999998887543
No 316
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=22.89 E-value=1.1e+02 Score=26.80 Aligned_cols=42 Identities=29% Similarity=0.304 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCcc--hHHHHHHHh----CCCeEEEeccc
Q 010825 107 LDLLAKLNDSSNSVNPAVSCIISDGFLP--FTVTAAQQL----GLPIVLLFTIS 154 (500)
Q Consensus 107 ~~ll~~l~~~~~~~~~~pDlvI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 154 (500)
.+.++.+... +||+||.|...+ .+..+++.+ ++|+++++...
T Consensus 71 ~~al~~~~~~------~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 71 MNGLIKARED------HPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHHS------CCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhcC------CCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 4555555544 899999998766 455555543 58888876543
No 317
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=22.85 E-value=1.3e+02 Score=26.65 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=27.7
Q ss_pred cEEEEEcCCC----------cC-cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPS----------QS-HIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~----------~G-H~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+||+++.... .| ...=+......|.+.|++|+++++..
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3777777653 23 33457777888899999999999853
No 318
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.83 E-value=1.2e+02 Score=26.48 Aligned_cols=30 Identities=13% Similarity=0.051 Sum_probs=20.4
Q ss_pred CeeEEEEcCC-cc-hHHHHHHHhCCCeEEEec
Q 010825 123 AVSCIISDGF-LP-FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 123 ~pDlvI~D~~-~~-~~~~~A~~lgiP~v~~~~ 152 (500)
+||+||.... .. ....--++.|||++.+..
T Consensus 57 ~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 57 KPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp CCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 9999998532 22 334445688999997643
No 319
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=22.79 E-value=49 Score=29.89 Aligned_cols=35 Identities=9% Similarity=0.127 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+.++|++. |+.|-+ -..|++.|.++||+|+.+.-
T Consensus 10 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 10 HHHMKILIT--GANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp --CEEEEEE--STTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred cccceEEEE--CCCChH--HHHHHHHHHhCCCeEEeccC
Confidence 444555543 555644 67789999999999998754
No 320
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=22.79 E-value=84 Score=28.41 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=31.2
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.|+|..-|+.|-..-...||..|+++|++|.++-.+.
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4666667788999999999999999999999986543
No 321
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.68 E-value=55 Score=29.95 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=25.7
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 4 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 689998766666 45788999999999998763
No 322
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=22.51 E-value=1.1e+02 Score=22.20 Aligned_cols=31 Identities=19% Similarity=0.104 Sum_probs=20.5
Q ss_pred CeeEEEEcCCcc--hHHHHHHH-------hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ-------LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 153 (500)
+||+||+|.... .+..+.+. -++|++.++..
T Consensus 45 ~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 45 QPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp CCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 899999997543 34443332 36888887654
No 323
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=22.49 E-value=22 Score=18.84 Aligned_cols=17 Identities=24% Similarity=0.597 Sum_probs=13.9
Q ss_pred CchhHHHHHhcCCceee
Q 010825 387 GWNSTIESLCAGVPMIC 403 (500)
Q Consensus 387 G~~s~~eal~~GvP~v~ 403 (500)
|.|++.-.+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 324
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=22.49 E-value=1e+02 Score=27.10 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=23.7
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+.++++.++.| --..+++.|+++|++|.++...
T Consensus 14 k~vlItGasgg---iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQN---IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44555544432 4578999999999999988754
No 325
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=22.44 E-value=97 Score=28.72 Aligned_cols=38 Identities=5% Similarity=-0.067 Sum_probs=31.8
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
+-|++.-=|+.|=..-...||..|+++|++|.++--+.
T Consensus 49 KVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 49 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred eEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 45556555788999999999999999999999997654
No 326
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=22.36 E-value=1.4e+02 Score=22.97 Aligned_cols=20 Identities=25% Similarity=0.260 Sum_probs=14.1
Q ss_pred CeeEEEEcCCcc--hHHHHHHH
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ 142 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~ 142 (500)
+||+||+|...+ .+..+++.
T Consensus 54 ~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 54 QFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp CCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHH
Confidence 899999998654 45555443
No 327
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.31 E-value=80 Score=23.77 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=20.1
Q ss_pred CeeEEEEcCCcc--hHHHHHHH-------hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ-------LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 153 (500)
+||+||+|...+ .+..+++. .++|++.++..
T Consensus 47 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 47 GYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 899999997554 45554443 24677776443
No 328
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=22.29 E-value=88 Score=27.91 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=26.3
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
-|+++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788866654 4578999999999999888753
No 329
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.27 E-value=95 Score=26.58 Aligned_cols=34 Identities=9% Similarity=0.012 Sum_probs=28.0
Q ss_pred EEEEc-CCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 13 AVCIP-SPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 13 il~~~-~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
|++.. -++.|-..-...||..|+++|++|.++-+
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~dp 38 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcc
Confidence 44444 36889999999999999999999999743
No 330
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=22.18 E-value=1e+02 Score=26.65 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=27.9
Q ss_pred cEEEEEcCCCcCc--HHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSH--IKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH--~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
..++++..|..|+ ...+..+++.|+++|+.|..+-..
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4566666666665 666889999999999998877543
No 331
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=22.16 E-value=1.1e+02 Score=25.91 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=22.1
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEeccc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 154 (500)
+||+||+|...+ .+..+++.+ ++|+++++...
T Consensus 46 ~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 46 PFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 899999998654 455554433 68888876543
No 332
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.05 E-value=1.1e+02 Score=27.62 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=25.9
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 467778766553 457899999999999998874
No 333
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=22.04 E-value=45 Score=31.61 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=25.6
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 89998877666 46789999999999998764
No 334
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.04 E-value=89 Score=25.89 Aligned_cols=39 Identities=13% Similarity=0.329 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCc---CcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQ---SHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
..+|+++|.-+. --..+...|++.|.++|.+|.|..++-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 357888875433 145689999999999999999998854
No 335
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.98 E-value=74 Score=28.13 Aligned_cols=29 Identities=10% Similarity=0.199 Sum_probs=21.2
Q ss_pred CeeEEEEcCCcc--hHHHHHHHhCCCeEEEe
Q 010825 123 AVSCIISDGFLP--FTVTAAQQLGLPIVLLF 151 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~ 151 (500)
+||+||...... ....--++.|+|++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999887542 23444567899999874
No 336
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=21.97 E-value=83 Score=29.26 Aligned_cols=37 Identities=5% Similarity=-0.185 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
|.+++|++. |+.|. --..|++.|.++||+|+.++-..
T Consensus 8 M~~~~IlVt--GatG~--iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIA--GATGF--IGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEE--CTTSH--HHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEE--CCCcH--HHHHHHHHHHHCCCCEEEEECCC
Confidence 445666655 45553 35678999999999999988644
No 337
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=21.97 E-value=1.2e+02 Score=26.48 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=27.6
Q ss_pred CCc-EEEEEcCCCcC----cHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKV-HAVCIPSPSQS----HIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~-~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+++ +|.+++.-..+ +..-...|++.|+++|+.|..-...
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 344 68888755543 3456788899999999998766553
No 338
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=21.95 E-value=75 Score=27.03 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=27.6
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEe
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVN 45 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 45 (500)
.+.+++.++..|+..-+..+++.|+++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 45666677777777778999999999999886653
No 339
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=21.85 E-value=61 Score=30.65 Aligned_cols=39 Identities=8% Similarity=0.095 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCcC-c---HHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQS-H---IKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
|+|+||+++..|..+ | +.-...+.++|.+.||+|..+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 457899988655444 4 23345688899999999998853
No 340
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=21.85 E-value=1.2e+02 Score=27.08 Aligned_cols=30 Identities=13% Similarity=-0.018 Sum_probs=24.5
Q ss_pred CeeEEEEcCCcc------hHHHHHHHhCCCeEEEec
Q 010825 123 AVSCIISDGFLP------FTVTAAQQLGLPIVLLFT 152 (500)
Q Consensus 123 ~pDlvI~D~~~~------~~~~~A~~lgiP~v~~~~ 152 (500)
+||+||+..-.. -+..+|.+||+|.+....
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 899999876442 588999999999998643
No 341
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=21.80 E-value=81 Score=29.18 Aligned_cols=34 Identities=6% Similarity=0.130 Sum_probs=27.2
Q ss_pred cEEEEEcCCCc--CcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQ--SHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~--GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+|++++.++- |+ -+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999997654 34 378999999999999998653
No 342
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=21.79 E-value=49 Score=31.02 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=27.4
Q ss_pred cccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCC-EEEEEeCCc
Q 010825 5 AIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGF-HITFVNTEF 48 (500)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH-~Vt~~~~~~ 48 (500)
++..+++||.++-.|..|.. +|..|+..|| +|+++-...
T Consensus 4 ~~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 4 ALVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CcCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECCh
Confidence 34455689998865444432 8899999999 988886543
No 343
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=21.65 E-value=73 Score=24.61 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=18.4
Q ss_pred CeeEEEEcCCcc--hHHHHHHH-------hCCCeEEEecc
Q 010825 123 AVSCIISDGFLP--FTVTAAQQ-------LGLPIVLLFTI 153 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 153 (500)
+||+||+|...+ .+..+.+. -++|+++++..
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 46 HPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp CCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 899999997554 23333332 46788877543
No 344
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=21.62 E-value=91 Score=25.92 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.0
Q ss_pred cEEEEEcCCCc--C-cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQ--S-HIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
.+|+++|.-+. . -..+...|++.|.++|.+|.|..++-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47888875433 1 45689999999999999999998854
No 345
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=21.61 E-value=68 Score=29.21 Aligned_cols=38 Identities=5% Similarity=0.198 Sum_probs=28.1
Q ss_pred cEEEEEcCCCcC---cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQS---HIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~G---H~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
|||+++..+... .......++++|.++||+|.++.+..
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhH
Confidence 489998877422 12334679999999999999988743
No 346
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.58 E-value=1.4e+02 Score=27.80 Aligned_cols=71 Identities=6% Similarity=0.089 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHH
Q 010825 316 NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESL 395 (500)
Q Consensus 316 ~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal 395 (500)
+.+....+.+++.....+.||...++.. ..++.++++...+-++|.. ||-.+-..+++-++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al 123 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------------SNQLLPYLDYDLISENPKI--LCGFSDITALATAI 123 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------------HHHHhhhcchhhhccCCeE--EEecccccHHHHHH
Confidence 3455667888998888899998876532 3345566666666666665 66666666666665
Q ss_pred h--cCCceeeCC
Q 010825 396 C--AGVPMICWP 405 (500)
Q Consensus 396 ~--~GvP~v~~P 405 (500)
+ .|+..+-=|
T Consensus 124 ~~~~g~~t~hGp 135 (327)
T 4h1h_A 124 YTQTELITYSGA 135 (327)
T ss_dssp HHHHCBCEEECC
T ss_pred HHhcCeEEEeCc
Confidence 4 344444433
No 347
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.58 E-value=99 Score=26.30 Aligned_cols=37 Identities=3% Similarity=0.108 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCcC----cHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQS----HIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+++|.+++.-. + +..-..+|++.|+++||.|..-...
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 47899998655 4 3345678888899999988776543
No 348
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=21.52 E-value=44 Score=33.30 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=28.0
Q ss_pred cccCCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 5 AIACSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|+.+.|++|.|+-.+..| ..+|..|+++||+|++....
T Consensus 10 ~~~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -----CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred ccccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 344889999999888777 46899999999999988653
No 349
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.48 E-value=4e+02 Score=23.09 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=79.8
Q ss_pred hhcCCCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhh-cCceeeeccchhHh
Q 010825 295 WLDSKEPNSVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFIASWCPQEEV 373 (500)
Q Consensus 295 ~l~~~~~~~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~nv~~~~~~pq~~l 373 (500)
|++-. .+++++|..|.++ ...+..|...+.++.++-. . ..+.+..... +++.+....-+.+.
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~--------~~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T--------VSAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S--------CCHHHHHHHHTTSCEEECSCCCGGG
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C--------CCHHHHHHHHcCCcEEEECCCCHhH
Confidence 55544 3568888888765 4455666677887765532 1 2222322111 23444333233456
Q ss_pred hccCCcceeEeecCchhHHHHHh----cCCceeeCCcccchhhhH-----HHhhhhhcceeEeeeCCCCCCcCHHHHHHH
Q 010825 374 LNHPAIGGFFTHSGWNSTIESLC----AGVPMICWPFLGDQPTNC-----RYTCNEWGVGLEIINGGDDNRVSRNEVEKQ 444 (500)
Q Consensus 374 L~~~~~~~~I~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na-----~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~ 444 (500)
|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+ ..+ ++-++-+.+ ......-.-+..|++.
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaI-ST~G~sP~la~~iR~~ 160 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAI-STDGASPLLTKRIKED 160 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEE-ECTTSCHHHHHHHHHH
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEE-ECCCCCcHHHHHHHHH
Confidence 777777 998888776666554 3555443 4444433 222 333344444 1101123445677777
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHH
Q 010825 445 VRELMGGEKGKQMRNKASKWKRFAEE 470 (500)
Q Consensus 445 i~~vl~~~~~~~~~~~a~~l~~~~~~ 470 (500)
|...+... ...+-+.+.++++.+++
T Consensus 161 ie~~lp~~-~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 161 LSSNYDES-YTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHSCTH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHccHH-HHHHHHHHHHHHHHHHH
Confidence 87777543 23467777888888776
No 350
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.44 E-value=31 Score=34.16 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
..|||+++-.|-.| ..||+.|.+.||+|+++-...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 36899888777655 468999999999999997643
No 351
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.40 E-value=1.2e+02 Score=25.86 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=30.8
Q ss_pred hHHHHHHHHhhcCCCCCCCCeeEEEEcCC----c-----chHHHHHHHhCCCeEEEecc
Q 010825 104 HPFLDLLAKLNDSSNSVNPAVSCIISDGF----L-----PFTVTAAQQLGLPIVLLFTI 153 (500)
Q Consensus 104 ~~l~~ll~~l~~~~~~~~~~pDlvI~D~~----~-----~~~~~~A~~lgiP~v~~~~~ 153 (500)
..+.++++.+.+ ++|+||+|.. . .....++..++.|++.+...
T Consensus 96 ~~l~~~l~~l~~-------~yD~viID~p~~l~~p~~~~~~~~~l~~~~~~~vi~v~~~ 147 (224)
T 1byi_A 96 LVMSAGLRALEQ-------QADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGV 147 (224)
T ss_dssp HHHHHHHHHHHT-------TCSEEEEECSSSTTCEEETTEEHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHHHHH-------hCCEEEEEcCCccccCCCcchhHHHHHHHhCCCEEEEecC
Confidence 455666676643 8999999986 1 13577888889998887654
No 352
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=21.28 E-value=1.4e+02 Score=27.14 Aligned_cols=38 Identities=11% Similarity=0.199 Sum_probs=23.3
Q ss_pred CCCcEEEEEc-CCCcCcHHH--HHHHHHHHHhCCCEEEEEe
Q 010825 8 CSKVHAVCIP-SPSQSHIKA--MLKLAKLLHHKGFHITFVN 45 (500)
Q Consensus 8 ~~~~~il~~~-~~~~GH~~p--~l~La~~L~~rGH~Vt~~~ 45 (500)
++.||||++- .|-...++- .-...+.|.+.||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5677887663 443333333 2346677888999999974
No 353
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.24 E-value=85 Score=31.28 Aligned_cols=25 Identities=20% Similarity=0.091 Sum_probs=21.3
Q ss_pred CeeEEEEcCCcchHHHHHHHhCCCeEEE
Q 010825 123 AVSCIISDGFLPFTVTAAQQLGLPIVLL 150 (500)
Q Consensus 123 ~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 150 (500)
+||++|... ....+|+++|||++.+
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 899999973 4678999999999964
No 354
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=21.23 E-value=1.1e+02 Score=27.99 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCcCcHHHH--HHHHHHHHhCC-CEEEEEeCC
Q 010825 8 CSKVHAVCIPSPSQSHIKAM--LKLAKLLHHKG-FHITFVNTE 47 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-H~Vt~~~~~ 47 (500)
.+++|||++. +..+|-.+. -.|++.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3578999994 555886443 57788888888 999998764
No 355
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=21.21 E-value=3.4e+02 Score=22.20 Aligned_cols=138 Identities=9% Similarity=0.047 Sum_probs=73.3
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccC-Ccce
Q 010825 303 SVIYVNFGSIIIMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHP-AIGG 381 (500)
Q Consensus 303 ~vV~vs~Gs~~~~~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~-~~~~ 381 (500)
+.|-|-+||.+ +....++....++..+..+-..+-+-.. .|+...+... . .... ..+.
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR------~p~~~~~~~~----------~---a~~~~~~~V 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK------TAEHVVSMLK----------E---YEALDRPKL 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT------CHHHHHHHHH----------H---HHTSCSCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC------CHHHHHHHHH----------H---hhhcCCCcE
Confidence 34666677765 4556677777888888876555544332 4543322110 0 0111 1333
Q ss_pred eEeecCchhHH---HHHhcCCceeeCCcccch---hhhHHHhhh-hhcceeEeeeCCCCCCcCHHHHHHHHHHHhCCChh
Q 010825 382 FFTHSGWNSTI---ESLCAGVPMICWPFLGDQ---PTNCRYTCN-EWGVGLEIINGGDDNRVSRNEVEKQVRELMGGEKG 454 (500)
Q Consensus 382 ~I~HgG~~s~~---eal~~GvP~v~~P~~~DQ---~~na~~~~~-~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 454 (500)
+|.=.|...-. =|-..-+|+|.+|.-.-. .+--..+ + -.|+.+.-. +...++..+...|. -+.|+.
T Consensus 62 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~v-qmp~GvpVatv----~~~~nAa~lA~~Il-~~~d~~- 134 (159)
T 3rg8_A 62 YITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSL-RMPSGISPALV----LEPKNAALLAARIF-SLYDKE- 134 (159)
T ss_dssp EEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHH-CCCTTCCCEEC----CSHHHHHHHHHHHH-TTTCHH-
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHH-hCCCCCceEEe----cCchHHHHHHHHHH-hCCCHH-
Confidence 88777754222 233467999999974321 1111111 1 125554430 34455555555553 234665
Q ss_pred HHHHHHHHHHHHHHHH
Q 010825 455 KQMRNKASKWKRFAEE 470 (500)
Q Consensus 455 ~~~~~~a~~l~~~~~~ 470 (500)
++++.++.++..++
T Consensus 135 --l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 135 --IADSVKSYMESNAQ 148 (159)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 88888888887775
No 356
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=21.17 E-value=79 Score=28.82 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCcC----cHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 010825 10 KVHAVCIPSPSQS----HIKAMLKLAKLLHHKGFHITFVNTEFNHRRFLK 55 (500)
Q Consensus 10 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~~~~~~v~~ 55 (500)
+|||+++..+..+ -+.-...++++|.++||+|..+........+.+
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~ 52 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEK 52 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHHh
Confidence 6899999865433 234467888999999999999988654444433
No 357
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.15 E-value=1.5e+02 Score=24.60 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCE
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFH 40 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~ 40 (500)
+.+.+|+++. ++.|++.-+-..++.|.+-|..
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~ 35 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIP 35 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCC
Confidence 4556777775 8999999999999999887753
No 358
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.10 E-value=1.2e+02 Score=26.60 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=25.1
Q ss_pred CeeEEEEcCCc---------chHHHHHHHhCCCeEEEeccc
Q 010825 123 AVSCIISDGFL---------PFTVTAAQQLGLPIVLLFTIS 154 (500)
Q Consensus 123 ~pDlvI~D~~~---------~~~~~~A~~lgiP~v~~~~~~ 154 (500)
++|+||+|..- .....+|+.++.|++.+....
T Consensus 110 ~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~~ 150 (228)
T 3of5_A 110 DLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIK 150 (228)
T ss_dssp SCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEECS
T ss_pred cCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcCC
Confidence 89999998631 146889999999999986554
No 359
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.08 E-value=1.3e+02 Score=22.02 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+...|+++|..+ ......+..|.+.||+|.++..
T Consensus 54 ~~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 54 NKNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp CTTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 3446788888544 2356678889999998876643
No 360
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.08 E-value=1.5e+02 Score=24.82 Aligned_cols=97 Identities=10% Similarity=0.113 Sum_probs=58.4
Q ss_pred CCcEEEEEcCCCcCcHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhh-hcCCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 010825 9 SKVHAVCIPSPSQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRFLK-SRGEHSLGGLPSFRFEAIPDGLPASSDESS 85 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 85 (500)
.+.+|++.. .-.+=.-++.+|+.|.+. ||++ +.+......+.+ . ++.+..+-++...+
T Consensus 26 ~~g~V~lsv--~D~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~----------Gl~v~~v~k~~eGG----- 86 (178)
T 1vmd_A 26 KKKRIALIA--HDRRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKL----------GLKVHRLKSGPLGG----- 86 (178)
T ss_dssp SSCEEEEEE--CGGGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHH----------CCCCEECSCGGGTH-----
T ss_pred CCCEEEEEE--ehhhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHh----------CceeEEEeecCCCC-----
Confidence 335555554 345557789999999998 9954 566666666766 4 45444432111001
Q ss_pred ccccHHHHHHHHHHhccchHHHHHHHHhhcCCCCCCCCeeEEEEcCC--cc--------hHHHHHHHhCCCeEEE
Q 010825 86 TTQDMYSLCESIMNNVMLHPFLDLLAKLNDSSNSVNPAVSCIISDGF--LP--------FTVTAAQQLGLPIVLL 150 (500)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~pDlvI~D~~--~~--------~~~~~A~~lgiP~v~~ 150 (500)
.+.+.++++. . +.|+||.-.- .. .-..+|-.+|||++..
T Consensus 87 -----------------~pqI~d~I~~---g------eIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 87 -----------------DQQIGAMIAE---G------KIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp -----------------HHHHHHHHHT---T------SCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred -----------------CchHHHHHHC---C------CccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 2333344433 2 8999996432 11 3566899999999963
No 361
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=21.07 E-value=69 Score=27.77 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
||.++++.++.| --..+++.|+++|++|.++...
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777766543 4578999999999999888754
No 362
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=21.05 E-value=1.3e+02 Score=27.21 Aligned_cols=39 Identities=8% Similarity=-0.035 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCcC-cHH---HHHHHHHHHHhCCCEEEEEeCCc
Q 010825 10 KVHAVCIPSPSQS-HIK---AMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 10 ~~~il~~~~~~~G-H~~---p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
++||+++..+... |-. ....++++|.++||+|.++....
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 4688888754332 222 34679999999999999988753
No 363
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=21.04 E-value=1.6e+02 Score=23.52 Aligned_cols=42 Identities=10% Similarity=0.136 Sum_probs=29.2
Q ss_pred cEEEEEc-CCCcCc--HHHHHHHHHHHHhCCCEE-EEEeCCcchhh
Q 010825 11 VHAVCIP-SPSQSH--IKAMLKLAKLLHHKGFHI-TFVNTEFNHRR 52 (500)
Q Consensus 11 ~~il~~~-~~~~GH--~~p~l~La~~L~~rGH~V-t~~~~~~~~~~ 52 (500)
||++|+- .+.+|+ ..-.+.+|+.+.+.||+| .++...+....
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~ 58 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYN 58 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHH
Confidence 5665544 444553 444678899999999999 88887665433
No 364
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=21.03 E-value=90 Score=27.12 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=24.4
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCC-CEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKG-FHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~~~ 48 (500)
++.++++ |+.|-+ -..|++.|+++| |+|+.+.-..
T Consensus 23 mk~vlVt-GatG~i--G~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLIL-GAGGQI--ARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEE-TTTSHH--HHHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEE-eCCcHH--HHHHHHHHHhCCCceEEEEEcCh
Confidence 4555555 344433 568899999999 9999887543
No 365
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=21.03 E-value=1.2e+02 Score=25.86 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=20.8
Q ss_pred CeeEEEEcCCcc--hHHHHHHHh-----CCCeEEEec
Q 010825 123 AVSCIISDGFLP--FTVTAAQQL-----GLPIVLLFT 152 (500)
Q Consensus 123 ~pDlvI~D~~~~--~~~~~A~~l-----giP~v~~~~ 152 (500)
+||+||+|...+ .+..+++.+ ++|+++++.
T Consensus 51 ~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 51 RPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 899999998654 455554433 688887743
No 366
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.01 E-value=1.2e+02 Score=26.09 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=27.6
Q ss_pred cEEEEEcCCCcCc--HHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQSH--IKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~GH--~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
...+++.++..|+ ..-+..+++.|.++|++|..+-.
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 3456666777777 66778899999999999876643
No 367
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.00 E-value=38 Score=29.33 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
|||+++-. |. --..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~--~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ET--TAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CH--HHHHHHHHHHhCCCeEEEEECCH
Confidence 45666643 33 35689999999999999998644
No 368
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=20.87 E-value=3.9e+02 Score=22.76 Aligned_cols=39 Identities=10% Similarity=0.115 Sum_probs=32.8
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
|+++-|+|.-.++-|--.-...|++.|..+|+.|.....
T Consensus 4 m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~ 42 (213)
T 4edh_A 4 MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTRE 42 (213)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccC
Confidence 567888888888999999999999999999999965543
No 369
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.87 E-value=3.9e+02 Score=24.50 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcC
Q 010825 319 QLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAG 398 (500)
Q Consensus 319 ~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~G 398 (500)
.-.++++.++..+..+++..+-... +|+.|.+..+..++=. |+++ .=...|.+.+..|+..|
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym~I------L~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~Ai~~G 230 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYMQI------LPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQASLRG 230 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCSC------CCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEHhHhhhh------cCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHHHHcC
Confidence 3345667777777777777665433 6666665544322210 2221 11235899999999999
Q ss_pred CceeeCCccc--chhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHH
Q 010825 399 VPMICWPFLG--DQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVREL 448 (500)
Q Consensus 399 vP~v~~P~~~--DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~v 448 (500)
+....+-.+. +..+-.-.+ . .--+.+ ...-|.++|.+.+.++
T Consensus 231 ~k~tG~TvH~v~~~lD~GpII-~--Q~~v~I-----~~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 231 VKLIGATCHYVTEELDAGPII-E--QDVVRV-----SHRDSIENMVRFGRDV 274 (302)
T ss_dssp CSEEEEEEEECCSSTTCSCEE-E--EEEEEC-----CTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCcCCCeE-E--EEEEec-----CCCCCHHHHHHHHHHH
Confidence 9998877642 333333333 1 223444 4567888888877654
No 370
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=20.82 E-value=95 Score=27.25 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=23.7
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
|.++++..+. ---..+++.|+++|++|.++.-
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 5566665543 2367899999999999988764
No 371
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=20.80 E-value=1.1e+02 Score=24.05 Aligned_cols=47 Identities=9% Similarity=0.117 Sum_probs=35.8
Q ss_pred cCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhC
Q 010825 397 AGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMG 450 (500)
Q Consensus 397 ~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~ 450 (500)
..+|+|++--..+.....+.+ +.|+--.+ .+-++.++|.++|.++++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~--~~Ga~~yl-----~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAA--QAGVNGYI-----VKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHH--HTTCCEEE-----ESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHH--HCCCCEEE-----ECCCCHHHHHHHHHHHHh
Confidence 468988887666665544444 57887777 678999999999999874
No 372
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=20.79 E-value=96 Score=27.80 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
-|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 26 gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 26 GRTALVTGSSRG---LGRAMAEGLAVAGARILINGT 58 (271)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766553 356899999999999987764
No 373
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=20.55 E-value=89 Score=27.73 Aligned_cols=36 Identities=8% Similarity=0.144 Sum_probs=27.2
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
..+++..+..|+..-+..+++.|+++|++|..+-..
T Consensus 47 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 47 RTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 445555566666667889999999999999877653
No 374
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.52 E-value=50 Score=28.80 Aligned_cols=19 Identities=21% Similarity=0.342 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCEEEEEe
Q 010825 27 MLKLAKLLHHKGFHITFVN 45 (500)
Q Consensus 27 ~l~La~~L~~rGH~Vt~~~ 45 (500)
-+.+|..|+++||+|+++=
T Consensus 14 GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4889999999999999984
No 375
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=20.52 E-value=2.1e+02 Score=23.70 Aligned_cols=40 Identities=5% Similarity=-0.016 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCCc
Q 010825 8 CSKVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (500)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 48 (500)
++.+||+++..++.. ..-+....+.|.+.|++|+++++..
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456789999876654 4455666778888999999999754
No 376
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=20.50 E-value=1.1e+02 Score=27.27 Aligned_cols=33 Identities=9% Similarity=0.039 Sum_probs=26.1
Q ss_pred cEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
-|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 367778866655 467899999999999998764
No 377
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=20.49 E-value=89 Score=28.09 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=26.7
Q ss_pred cEEEEEcCCCc--CcHHHHHHHHHHHHhCCCEEEEEeC
Q 010825 11 VHAVCIPSPSQ--SHIKAMLKLAKLLHHKGFHITFVNT 46 (500)
Q Consensus 11 ~~il~~~~~~~--GH~~p~l~La~~L~~rGH~Vt~~~~ 46 (500)
.+|++++.++- |+ -+.+|+.|+.+|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 48999997654 34 37899999999999999865
No 378
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=20.39 E-value=1.8e+02 Score=22.15 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=29.8
Q ss_pred cCCceeeCCcccchhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHhCC
Q 010825 397 AGVPMICWPFLGDQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELMGG 451 (500)
Q Consensus 397 ~GvP~v~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl~~ 451 (500)
..+|+|++--..|.......+ +..|+--.+ .+.++.++|..+|.+++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l-----~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFL-----TKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEE-----ESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-Hhhchhhhc-----cCCCCHHHHHHHHHHHHHH
Confidence 356776665444433333333 323453344 4678999999999998853
No 379
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=20.27 E-value=1.6e+02 Score=27.65 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHH
Q 010825 316 NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESL 395 (500)
Q Consensus 316 ~~~~~~~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal 395 (500)
+.+..+.|.+++.....+.||...++.. -.++.++++...|-+++.+ ||-++-...++-++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 3455667888998888899998876532 2355566666666666666 77777777777777
Q ss_pred h--cCCceeeCCc
Q 010825 396 C--AGVPMICWPF 406 (500)
Q Consensus 396 ~--~GvP~v~~P~ 406 (500)
+ .|+..+-=|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 6 4777666665
No 380
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=20.27 E-value=63 Score=29.56 Aligned_cols=33 Identities=9% Similarity=-0.024 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
++||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899998887774 6789999999999988653
No 381
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.26 E-value=94 Score=28.07 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=27.1
Q ss_pred cEEEEEcCCCc--CcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 11 VHAVCIPSPSQ--SHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 11 ~~il~~~~~~~--GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 48999997754 34 378999999999999998653
No 382
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.23 E-value=3.1e+02 Score=24.91 Aligned_cols=102 Identities=12% Similarity=0.049 Sum_probs=57.3
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCCCCCCCCchHHHHHhhcCceeeeccchhHhhccCCcceeEeecCchhHHHHHhcCCce
Q 010825 322 EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFIASWCPQEEVLNHPAIGGFFTHSGWNSTIESLCAGVPM 401 (500)
Q Consensus 322 ~l~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~ 401 (500)
++++.++..+..+++..+-... +|+.|.+..+..++=. |+++ .=...|.+.+..|+.+|+..
T Consensus 157 ~~~~~l~~~~~Dlivla~y~~i------l~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~~~ 218 (286)
T 3n0v_A 157 KVLQVIEETGAELVILARYMQV------LSPELCRRLDGWAINI----------HHSL--LPGFKGAKPYHQAYNKGVKM 218 (286)
T ss_dssp HHHHHHHHHTCSEEEESSCCSC------CCHHHHHHTTTSEEEE----------EECS--STTCCCSCHHHHHHHHTCSE
T ss_pred HHHHHHHhcCCCEEEecccccc------cCHHHHhhhcCCeEEe----------cccc--ccCCCCccHHHHHHHcCCCe
Confidence 4556666666666666654432 6666655443322200 1111 11134889999999999999
Q ss_pred eeCCccc--chhhhHHHhhhhhcceeEeeeCCCCCCcCHHHHHHHHHHHh
Q 010825 402 ICWPFLG--DQPTNCRYTCNEWGVGLEIINGGDDNRVSRNEVEKQVRELM 449 (500)
Q Consensus 402 v~~P~~~--DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~~l~~~i~~vl 449 (500)
..+-.+. +..+-.-.+ . .--+.+ ...-|.++|.+.+.++-
T Consensus 219 ~G~Tvh~v~~~lD~GpIi-~--Q~~~~i-----~~~dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 219 VGATAHYINNDLDEGPII-A--QGVEVV-----DHSHYPEDLIAKGRDIE 260 (286)
T ss_dssp EEEEEEECCSSTTCSCEE-E--EEEEEC-----CTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEcCCCCCCcee-E--EEEEEc-----CCCCCHHHHHHHHHHHH
Confidence 8877642 333333333 1 223444 45678888887776543
No 383
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=20.07 E-value=70 Score=30.34 Aligned_cols=39 Identities=5% Similarity=0.184 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCcCcHHH----HHHHHHHHHhCCCEEEEEeCC
Q 010825 9 SKVHAVCIPSPSQSHIKA----MLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 9 ~~~~il~~~~~~~GH~~p----~l~La~~L~~rGH~Vt~~~~~ 47 (500)
.|+||+++..|..+--.- -..+++.|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 478999999776664333 447888888889999998754
No 384
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.06 E-value=1.1e+02 Score=28.26 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 10 KVHAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
+++|++. |+.|.+ -..|++.|.++||+|+.+.-.
T Consensus 3 ~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 4455544 444533 567899999999999988653
No 385
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.02 E-value=1.2e+02 Score=26.81 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=25.5
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHHHhCCCEEEEEeCC
Q 010825 12 HAVCIPSPSQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (500)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 47 (500)
|.++++.++.| --..+|++|+++|++|.++...
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777766654 4578999999999999888753
Done!