Query 010827
Match_columns 500
No_of_seqs 330 out of 3224
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:05:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 1.4E-50 4.9E-55 423.1 33.6 377 76-497 39-470 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 8.3E-45 2.8E-49 373.8 32.7 361 79-497 2-385 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 8.8E-44 3E-48 367.2 31.4 365 79-499 4-399 (437)
4 3h28_A Sulfide-quinone reducta 100.0 2E-41 7E-46 348.8 31.1 361 79-499 2-387 (430)
5 3klj_A NAD(FAD)-dependent dehy 100.0 1.1E-41 3.8E-46 344.7 24.3 308 77-471 7-320 (385)
6 3ef6_A Toluene 1,2-dioxygenase 100.0 2.9E-41 9.9E-46 345.4 24.0 324 79-470 2-333 (410)
7 4eqs_A Coenzyme A disulfide re 100.0 3.3E-40 1.1E-44 339.9 29.8 302 80-448 1-311 (437)
8 3lxd_A FAD-dependent pyridine 100.0 3.8E-40 1.3E-44 337.9 29.4 325 78-470 8-345 (415)
9 1xhc_A NADH oxidase /nitrite r 100.0 2.1E-40 7.1E-45 333.8 26.3 312 78-471 7-323 (367)
10 3fg2_P Putative rubredoxin red 100.0 2.9E-40 1E-44 337.4 26.6 323 79-470 1-334 (404)
11 2gqw_A Ferredoxin reductase; f 100.0 1.6E-39 5.5E-44 332.1 23.0 318 78-470 6-333 (408)
12 3h8l_A NADH oxidase; membrane 100.0 3.8E-39 1.3E-43 329.8 25.0 312 80-461 2-348 (409)
13 3vrd_B FCCB subunit, flavocyto 100.0 1.6E-39 5.5E-44 331.8 21.6 321 79-465 2-339 (401)
14 3ics_A Coenzyme A-disulfide re 100.0 7.7E-39 2.6E-43 342.5 27.3 328 49-447 14-352 (588)
15 1q1r_A Putidaredoxin reductase 100.0 6.2E-39 2.1E-43 330.0 24.2 323 79-470 4-343 (431)
16 3cgb_A Pyridine nucleotide-dis 100.0 3E-38 1E-42 329.5 29.0 327 49-447 14-352 (480)
17 3ntd_A FAD-dependent pyridine 100.0 5.6E-38 1.9E-42 334.5 27.7 325 80-448 2-338 (565)
18 3iwa_A FAD-dependent pyridine 100.0 2.3E-38 7.8E-43 330.0 23.3 307 79-448 3-329 (472)
19 3oc4_A Oxidoreductase, pyridin 100.0 6.2E-38 2.1E-42 324.9 24.9 304 80-448 3-314 (452)
20 3kd9_A Coenzyme A disulfide re 100.0 5.2E-38 1.8E-42 325.2 23.9 305 79-448 3-315 (449)
21 2bc0_A NADH oxidase; flavoprot 100.0 2.5E-37 8.6E-42 323.3 27.9 305 78-447 34-360 (490)
22 2cdu_A NADPH oxidase; flavoenz 100.0 1.8E-37 6.3E-42 321.4 26.3 301 80-447 1-316 (452)
23 2v3a_A Rubredoxin reductase; a 100.0 3.2E-37 1.1E-41 312.9 26.5 297 79-447 4-305 (384)
24 1m6i_A Programmed cell death p 100.0 2.1E-37 7E-42 323.8 22.4 324 77-463 9-367 (493)
25 3f8d_A Thioredoxin reductase ( 100.0 3.1E-37 1.1E-41 304.7 22.5 306 77-454 13-321 (323)
26 1ebd_A E3BD, dihydrolipoamide 100.0 2.4E-37 8.3E-42 320.8 22.2 292 79-447 3-332 (455)
27 4a5l_A Thioredoxin reductase; 100.0 2.7E-37 9.1E-42 304.5 21.3 299 78-450 3-312 (314)
28 1zmd_A Dihydrolipoyl dehydroge 100.0 1.3E-37 4.5E-42 324.4 19.8 320 79-471 6-370 (474)
29 1dxl_A Dihydrolipoamide dehydr 100.0 3.3E-37 1.1E-41 321.2 22.1 295 78-447 5-341 (470)
30 2qae_A Lipoamide, dihydrolipoy 100.0 3.2E-37 1.1E-41 321.0 20.5 295 79-447 2-339 (468)
31 1zk7_A HGII, reductase, mercur 100.0 2.6E-36 8.8E-41 314.1 27.3 289 78-448 3-334 (467)
32 3fbs_A Oxidoreductase; structu 100.0 3.8E-37 1.3E-41 300.5 19.8 287 79-453 2-295 (297)
33 1nhp_A NADH peroxidase; oxidor 100.0 3.9E-36 1.3E-40 311.0 28.2 303 80-447 1-315 (447)
34 3urh_A Dihydrolipoyl dehydroge 100.0 8.6E-37 2.9E-41 319.6 23.0 301 75-448 21-363 (491)
35 2hqm_A GR, grase, glutathione 100.0 1.2E-36 4.2E-41 317.2 24.0 289 78-448 10-347 (479)
36 2a8x_A Dihydrolipoyl dehydroge 100.0 2.4E-37 8.2E-42 321.6 18.3 292 79-447 3-333 (464)
37 1v59_A Dihydrolipoamide dehydr 100.0 2.3E-36 7.8E-41 315.4 24.2 318 79-471 5-375 (478)
38 1mo9_A ORF3; nucleotide bindin 100.0 1.4E-36 4.7E-41 320.1 22.7 313 77-471 41-403 (523)
39 1xdi_A RV3303C-LPDA; reductase 100.0 3.5E-37 1.2E-41 323.1 18.1 297 79-447 2-341 (499)
40 1ges_A Glutathione reductase; 100.0 1.2E-36 4.2E-41 314.8 21.8 286 79-447 4-327 (450)
41 3l8k_A Dihydrolipoyl dehydroge 100.0 1.1E-36 3.9E-41 316.5 21.6 315 79-470 4-360 (466)
42 2zbw_A Thioredoxin reductase; 100.0 4.3E-36 1.5E-40 298.7 24.5 307 79-461 5-328 (335)
43 2wpf_A Trypanothione reductase 100.0 3.5E-36 1.2E-40 314.7 24.6 288 79-447 7-354 (495)
44 1fec_A Trypanothione reductase 100.0 6.1E-36 2.1E-40 312.6 25.9 288 79-447 3-350 (490)
45 2q7v_A Thioredoxin reductase; 100.0 5.6E-36 1.9E-40 296.7 24.2 300 77-453 6-315 (325)
46 3dk9_A Grase, GR, glutathione 100.0 2.3E-36 7.7E-41 315.4 22.3 297 77-448 18-356 (478)
47 1ojt_A Surface protein; redox- 100.0 1.6E-36 5.3E-41 316.8 21.0 291 79-447 6-348 (482)
48 2r9z_A Glutathione amide reduc 100.0 4.6E-36 1.6E-40 311.4 24.4 285 79-447 4-326 (463)
49 4gcm_A TRXR, thioredoxin reduc 100.0 5E-36 1.7E-40 295.3 23.4 295 79-450 6-306 (312)
50 3itj_A Thioredoxin reductase 1 100.0 2.8E-36 9.4E-41 300.0 21.3 303 76-452 19-337 (338)
51 2eq6_A Pyruvate dehydrogenase 100.0 1.7E-36 5.8E-41 314.9 20.5 291 79-447 6-333 (464)
52 3qfa_A Thioredoxin reductase 1 100.0 8.4E-36 2.9E-40 313.6 25.4 302 76-447 29-379 (519)
53 4dna_A Probable glutathione re 100.0 5.5E-36 1.9E-40 311.2 22.4 287 79-448 5-331 (463)
54 3r9u_A Thioredoxin reductase; 100.0 8E-36 2.7E-40 293.7 22.0 300 78-452 3-314 (315)
55 1onf_A GR, grase, glutathione 100.0 1.2E-35 4.1E-40 311.3 24.0 291 79-447 2-370 (500)
56 3cty_A Thioredoxin reductase; 100.0 2.3E-35 7.7E-40 291.5 23.4 298 78-452 15-318 (319)
57 2yqu_A 2-oxoglutarate dehydrog 100.0 4.7E-36 1.6E-40 311.1 19.3 289 80-447 2-326 (455)
58 1fl2_A Alkyl hydroperoxide red 100.0 4.3E-35 1.5E-39 288.2 24.6 301 80-453 2-308 (310)
59 3lad_A Dihydrolipoamide dehydr 100.0 1.9E-35 6.4E-40 308.4 23.2 295 79-448 3-343 (476)
60 3o0h_A Glutathione reductase; 100.0 8.1E-36 2.8E-40 311.5 20.1 287 79-448 26-351 (484)
61 3lzw_A Ferredoxin--NADP reduct 100.0 2.7E-35 9.1E-40 292.1 22.8 297 79-453 7-318 (332)
62 2q0l_A TRXR, thioredoxin reduc 100.0 3.5E-35 1.2E-39 289.0 23.4 300 80-451 2-310 (311)
63 3dgz_A Thioredoxin reductase 2 100.0 1.4E-35 4.7E-40 310.1 21.1 320 78-470 5-377 (488)
64 1trb_A Thioredoxin reductase; 100.0 2.1E-35 7.3E-40 291.6 21.2 300 79-452 5-316 (320)
65 3dgh_A TRXR-1, thioredoxin red 100.0 3.9E-35 1.3E-39 306.4 23.9 298 77-448 7-352 (483)
66 3ab1_A Ferredoxin--NADP reduct 100.0 7.7E-35 2.6E-39 292.7 24.7 308 78-460 13-338 (360)
67 4fk1_A Putative thioredoxin re 100.0 3.6E-35 1.2E-39 288.2 20.2 293 77-451 4-301 (304)
68 1vdc_A NTR, NADPH dependent th 100.0 9.5E-35 3.3E-39 288.7 21.3 306 79-456 8-329 (333)
69 1lvl_A Dihydrolipoamide dehydr 100.0 1E-34 3.4E-39 301.1 21.8 285 78-447 4-329 (458)
70 3ic9_A Dihydrolipoamide dehydr 100.0 9.3E-35 3.2E-39 303.8 21.4 292 79-448 8-338 (492)
71 2a87_A TRXR, TR, thioredoxin r 100.0 2.1E-34 7.1E-39 286.7 22.8 298 77-452 12-318 (335)
72 4b1b_A TRXR, thioredoxin reduc 100.0 3.4E-34 1.2E-38 300.3 20.7 313 79-470 42-409 (542)
73 3k30_A Histamine dehydrogenase 100.0 2.1E-35 7.1E-40 320.8 6.8 314 46-462 362-687 (690)
74 1hyu_A AHPF, alkyl hydroperoxi 100.0 5.7E-33 1.9E-37 292.1 24.4 300 77-451 210-517 (521)
75 2x8g_A Thioredoxin glutathione 100.0 3.5E-33 1.2E-37 299.1 22.9 299 77-448 105-459 (598)
76 2vdc_G Glutamate synthase [NAD 100.0 5.4E-34 1.8E-38 294.1 13.9 307 77-455 120-449 (456)
77 4a9w_A Monooxygenase; baeyer-v 100.0 1.2E-33 4.1E-38 282.8 15.5 288 79-451 3-353 (357)
78 1o94_A Tmadh, trimethylamine d 100.0 1.6E-34 5.4E-39 315.1 6.4 324 47-462 361-711 (729)
79 3d1c_A Flavin-containing putat 100.0 3.6E-32 1.2E-36 273.9 17.4 294 79-451 4-340 (369)
80 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.1E-31 3.9E-36 290.7 13.6 287 46-445 349-671 (671)
81 3s5w_A L-ornithine 5-monooxyge 100.0 2.6E-30 9E-35 268.6 19.3 317 79-457 30-456 (463)
82 1gte_A Dihydropyrimidine dehyd 100.0 5E-31 1.7E-35 297.0 14.4 314 78-460 186-526 (1025)
83 2xve_A Flavin-containing monoo 100.0 3.6E-30 1.2E-34 267.0 19.7 278 80-449 3-340 (464)
84 1lqt_A FPRA; NADP+ derivative, 100.0 1.5E-30 5E-35 268.8 14.9 313 79-451 3-388 (456)
85 1cjc_A Protein (adrenodoxin re 100.0 3.3E-30 1.1E-34 266.4 15.2 312 78-453 5-398 (460)
86 2gv8_A Monooxygenase; FMO, FAD 100.0 7.6E-29 2.6E-33 256.3 15.3 275 78-448 5-360 (447)
87 2gag_A Heterotetrameric sarcos 100.0 8.6E-29 2.9E-33 277.0 16.1 301 79-451 128-445 (965)
88 1y56_A Hypothetical protein PH 99.9 1.4E-27 4.8E-32 249.4 14.9 263 79-450 108-377 (493)
89 3gwf_A Cyclohexanone monooxyge 99.9 1.8E-27 6E-32 250.6 12.4 300 79-449 8-456 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 3.9E-25 1.3E-29 232.9 14.6 185 78-286 8-225 (545)
91 4ap3_A Steroid monooxygenase; 99.9 5.2E-25 1.8E-29 232.2 13.7 172 78-282 20-226 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 8E-24 2.7E-28 223.6 16.1 176 78-282 15-221 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2.1E-21 7.1E-26 174.9 13.7 163 246-458 3-179 (180)
94 4b63_A L-ornithine N5 monooxyg 99.9 2.1E-20 7.1E-25 195.3 21.9 335 75-449 35-487 (501)
95 3fpz_A Thiazole biosynthetic e 99.6 1.9E-18 6.4E-23 170.8 -15.5 259 78-450 64-325 (326)
96 2gqf_A Hypothetical protein HI 99.5 1.2E-15 4.1E-20 154.7 2.5 47 398-447 353-400 (401)
97 2e5v_A L-aspartate oxidase; ar 99.5 4.5E-16 1.6E-20 161.2 -1.3 228 143-448 125-367 (472)
98 2cul_A Glucose-inhibited divis 99.4 5.1E-13 1.7E-17 125.0 9.8 163 245-449 4-231 (232)
99 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.4E-11 4.6E-16 130.0 18.8 149 78-277 27-220 (651)
100 2zxi_A TRNA uridine 5-carboxym 99.3 7.2E-11 2.5E-15 124.0 17.6 118 79-212 27-189 (637)
101 2ywl_A Thioredoxin reductase r 99.2 6.4E-11 2.2E-15 105.8 9.6 108 80-205 2-112 (180)
102 3cp8_A TRNA uridine 5-carboxym 99.1 6.9E-11 2.4E-15 124.6 9.3 118 77-210 19-181 (641)
103 3k7m_X 6-hydroxy-L-nicotine ox 99.1 3E-11 1E-15 123.5 6.0 95 287-417 203-306 (431)
104 2cul_A Glucose-inhibited divis 99.0 1E-09 3.6E-14 102.3 9.2 115 79-210 3-132 (232)
105 1rp0_A ARA6, thiazole biosynth 99.0 5.1E-10 1.8E-14 107.8 6.9 182 245-451 40-276 (284)
106 3v76_A Flavoprotein; structura 98.9 4.2E-09 1.4E-13 106.9 9.0 108 78-203 26-187 (417)
107 4dgk_A Phytoene dehydrogenase; 98.8 1.3E-09 4.5E-14 113.6 3.6 40 79-124 1-40 (501)
108 2bry_A NEDD9 interacting prote 98.8 1.4E-08 4.8E-13 105.6 9.4 120 77-210 90-237 (497)
109 3nlc_A Uncharacterized protein 98.8 1.8E-08 6.2E-13 105.3 10.0 47 396-450 497-543 (549)
110 3alj_A 2-methyl-3-hydroxypyrid 98.7 1.8E-08 6.2E-13 101.0 9.3 106 78-203 10-160 (379)
111 3nrn_A Uncharacterized protein 98.7 6.7E-08 2.3E-12 98.3 13.7 56 287-373 188-243 (421)
112 1rp0_A ARA6, thiazole biosynth 98.7 4.3E-08 1.5E-12 94.2 10.3 37 79-120 39-75 (284)
113 2x3n_A Probable FAD-dependent 98.7 3.7E-08 1.3E-12 99.4 9.5 109 79-204 6-167 (399)
114 3dme_A Conserved exported prot 98.7 4.6E-07 1.6E-11 89.9 16.4 60 288-373 150-209 (369)
115 1ryi_A Glycine oxidase; flavop 98.6 3.2E-08 1.1E-12 99.1 7.2 37 76-118 14-50 (382)
116 3rp8_A Flavoprotein monooxygen 98.6 4.3E-08 1.5E-12 99.2 7.9 39 75-119 19-57 (407)
117 2xdo_A TETX2 protein; tetracyc 98.6 1E-07 3.4E-12 96.2 10.5 40 74-119 21-60 (398)
118 2i0z_A NAD(FAD)-utilizing dehy 98.6 5.5E-08 1.9E-12 99.8 8.6 110 78-203 25-191 (447)
119 3ka7_A Oxidoreductase; structu 98.6 2E-07 6.8E-12 94.7 12.5 38 80-123 1-38 (425)
120 2v3a_A Rubredoxin reductase; a 98.6 1.5E-07 5E-12 94.6 9.9 100 79-205 145-245 (384)
121 3nix_A Flavoprotein/dehydrogen 98.6 6.2E-08 2.1E-12 98.4 7.1 110 79-203 5-166 (421)
122 3i3l_A Alkylhalidase CMLS; fla 98.6 1.3E-07 4.3E-12 100.2 9.6 36 77-118 21-56 (591)
123 3e1t_A Halogenase; flavoprotei 98.6 9.4E-08 3.2E-12 99.8 8.4 34 79-118 7-40 (512)
124 2vou_A 2,6-dihydroxypyridine h 98.6 2.1E-07 7E-12 93.9 10.5 36 78-119 4-39 (397)
125 1yvv_A Amine oxidase, flavin-c 98.6 1.4E-07 4.7E-12 92.7 9.0 35 79-119 2-36 (336)
126 1nhp_A NADH peroxidase; oxidor 98.5 2E-07 6.7E-12 95.6 10.2 103 78-208 148-251 (447)
127 1s3e_A Amine oxidase [flavin-c 98.5 1.1E-07 3.7E-12 99.5 8.3 40 79-124 4-43 (520)
128 3oz2_A Digeranylgeranylglycero 98.5 5.7E-08 1.9E-12 97.4 5.8 37 78-120 3-39 (397)
129 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 1.9E-07 6.4E-12 92.2 9.3 38 80-120 2-39 (342)
130 2bry_A NEDD9 interacting prote 98.5 4.6E-08 1.6E-12 101.7 4.6 159 191-375 37-232 (497)
131 2yqu_A 2-oxoglutarate dehydrog 98.5 1.8E-07 6.3E-12 96.1 8.8 101 79-207 167-268 (455)
132 3ps9_A TRNA 5-methylaminomethy 98.5 2.7E-07 9.1E-12 99.8 10.4 35 78-118 271-305 (676)
133 2gqw_A Ferredoxin reductase; f 98.5 3E-07 1E-11 93.2 10.1 96 79-205 145-241 (408)
134 3pl8_A Pyranose 2-oxidase; sub 98.5 2.8E-08 9.5E-13 106.0 2.3 38 78-121 45-82 (623)
135 3cgv_A Geranylgeranyl reductas 98.5 8.9E-08 3.1E-12 96.3 5.9 35 79-119 4-38 (397)
136 3ef6_A Toluene 1,2-dioxygenase 98.5 2E-07 6.8E-12 94.5 8.5 100 79-205 143-243 (410)
137 1k0i_A P-hydroxybenzoate hydro 98.5 1.7E-07 5.9E-12 94.3 7.9 35 79-119 2-36 (394)
138 3fmw_A Oxygenase; mithramycin, 98.5 2.1E-07 7.1E-12 98.3 8.4 109 78-203 48-207 (570)
139 3dje_A Fructosyl amine: oxygen 98.5 2.8E-07 9.5E-12 94.2 9.0 36 78-119 5-41 (438)
140 1y56_B Sarcosine oxidase; dehy 98.5 3E-07 1E-11 92.0 8.9 34 79-118 5-38 (382)
141 3lxd_A FAD-dependent pyridine 98.5 5.6E-07 1.9E-11 91.3 10.6 101 79-205 152-253 (415)
142 2uzz_A N-methyl-L-tryptophan o 98.4 1.9E-07 6.5E-12 93.1 6.7 35 79-119 2-36 (372)
143 1y0p_A Fumarate reductase flav 98.4 3.7E-07 1.3E-11 96.6 9.2 36 79-120 126-161 (571)
144 3nyc_A D-arginine dehydrogenas 98.4 1.1E-07 3.8E-12 95.0 4.8 35 77-118 7-41 (381)
145 3pvc_A TRNA 5-methylaminomethy 98.4 5.4E-07 1.9E-11 97.5 10.4 35 78-118 263-297 (689)
146 4eqs_A Coenzyme A disulfide re 98.4 5.6E-07 1.9E-11 91.9 9.9 95 79-205 147-242 (437)
147 2eq6_A Pyruvate dehydrogenase 98.4 4.8E-07 1.6E-11 93.2 9.4 101 79-207 169-275 (464)
148 1xhc_A NADH oxidase /nitrite r 98.4 3.5E-07 1.2E-11 91.2 8.0 92 80-205 144-236 (367)
149 3ihg_A RDME; flavoenzyme, anth 98.4 4.4E-07 1.5E-11 95.3 8.9 34 79-118 5-38 (535)
150 2bc0_A NADH oxidase; flavoprot 98.4 7.3E-07 2.5E-11 92.5 10.4 101 78-206 193-294 (490)
151 2gf3_A MSOX, monomeric sarcosi 98.4 4E-07 1.4E-11 91.2 8.1 34 79-118 3-36 (389)
152 3kkj_A Amine oxidase, flavin-c 98.4 1.8E-07 6.1E-12 88.1 5.3 38 79-122 2-39 (336)
153 1ges_A Glutathione reductase; 98.4 6.1E-07 2.1E-11 92.1 9.5 101 79-206 167-268 (450)
154 1lvl_A Dihydrolipoamide dehydr 98.4 3E-07 1E-11 94.6 6.8 99 79-207 171-272 (458)
155 3fg2_P Putative rubredoxin red 98.4 5.9E-07 2E-11 90.8 8.8 101 79-205 142-243 (404)
156 3oc4_A Oxidoreductase, pyridin 98.4 1.8E-06 6E-11 88.7 12.5 102 79-208 147-249 (452)
157 2qa1_A PGAE, polyketide oxygen 98.4 6.4E-07 2.2E-11 93.1 9.2 37 77-119 9-45 (500)
158 2qa2_A CABE, polyketide oxygen 98.4 7.1E-07 2.4E-11 92.8 9.4 110 77-203 10-166 (499)
159 1qo8_A Flavocytochrome C3 fuma 98.4 4.3E-07 1.5E-11 96.0 7.7 37 78-120 120-156 (566)
160 1v59_A Dihydrolipoamide dehydr 98.4 7.1E-07 2.4E-11 92.3 9.1 100 79-206 183-290 (478)
161 2r9z_A Glutathione amide reduc 98.4 7.6E-07 2.6E-11 91.7 9.2 100 79-206 166-267 (463)
162 3atr_A Conserved archaeal prot 98.4 4.4E-07 1.5E-11 93.2 7.3 35 79-119 6-40 (453)
163 1q1r_A Putidaredoxin reductase 98.4 8.5E-07 2.9E-11 90.4 9.2 101 79-205 149-252 (431)
164 2oln_A NIKD protein; flavoprot 98.4 5.2E-07 1.8E-11 90.8 7.5 35 79-119 4-38 (397)
165 1onf_A GR, grase, glutathione 98.4 1.5E-06 5.2E-11 90.3 11.1 101 79-206 176-278 (500)
166 2gag_B Heterotetrameric sarcos 98.4 6.9E-07 2.4E-11 90.0 8.3 36 78-118 20-56 (405)
167 1ebd_A E3BD, dihydrolipoamide 98.3 8.9E-07 3E-11 91.0 9.2 100 79-206 170-273 (455)
168 3itj_A Thioredoxin reductase 1 98.3 2.2E-06 7.5E-11 83.8 11.7 103 244-376 22-145 (338)
169 1zmd_A Dihydrolipoyl dehydroge 98.3 1.2E-06 4E-11 90.5 10.1 102 79-206 178-285 (474)
170 4hb9_A Similarities with proba 98.3 1.2E-06 4.1E-11 88.2 9.9 34 80-119 2-35 (412)
171 1d4d_A Flavocytochrome C fumar 98.3 1.2E-06 4.2E-11 92.6 10.0 37 78-120 125-161 (572)
172 2cdu_A NADPH oxidase; flavoenz 98.3 1.3E-06 4.3E-11 89.7 9.6 101 79-206 149-250 (452)
173 2hqm_A GR, grase, glutathione 98.3 1.1E-06 3.8E-11 90.8 9.1 102 78-205 184-287 (479)
174 1fec_A Trypanothione reductase 98.3 1.5E-06 5E-11 90.2 9.7 104 79-206 187-291 (490)
175 2gmh_A Electron transfer flavo 98.3 8.7E-07 3E-11 93.9 8.0 42 79-120 35-76 (584)
176 3f8d_A Thioredoxin reductase ( 98.3 2E-06 6.7E-11 83.6 9.9 99 245-376 16-128 (323)
177 2wpf_A Trypanothione reductase 98.3 1.5E-06 5E-11 90.3 9.5 104 79-206 191-295 (495)
178 3iwa_A FAD-dependent pyridine 98.3 1.1E-06 3.7E-11 90.8 8.3 100 79-205 159-260 (472)
179 3c96_A Flavin-containing monoo 98.3 8.6E-07 2.9E-11 89.7 7.4 35 79-119 4-39 (410)
180 3kd9_A Coenzyme A disulfide re 98.3 2.3E-06 7.8E-11 87.7 10.2 99 78-205 147-246 (449)
181 1ojt_A Surface protein; redox- 98.3 8.6E-07 2.9E-11 91.8 7.0 99 79-205 185-288 (482)
182 4a9w_A Monooxygenase; baeyer-v 98.3 3.6E-06 1.2E-10 82.9 10.9 95 245-372 4-131 (357)
183 3ics_A Coenzyme A-disulfide re 98.3 1.9E-06 6.5E-11 91.5 9.3 97 79-205 187-284 (588)
184 3ntd_A FAD-dependent pyridine 98.3 2E-06 7E-11 90.8 9.5 110 79-205 151-269 (565)
185 3lzw_A Ferredoxin--NADP reduct 98.2 1.9E-06 6.7E-11 84.0 8.7 100 245-376 8-129 (332)
186 3klj_A NAD(FAD)-dependent dehy 98.2 2.7E-06 9.2E-11 85.3 9.8 99 245-377 10-120 (385)
187 2a8x_A Dihydrolipoyl dehydroge 98.2 2.3E-06 7.8E-11 88.1 9.5 101 79-207 171-275 (464)
188 3c4n_A Uncharacterized protein 98.2 8.5E-07 2.9E-11 89.7 6.1 36 79-118 36-71 (405)
189 3jsk_A Cypbp37 protein; octame 98.2 2.7E-06 9.2E-11 83.0 9.2 38 79-120 79-116 (344)
190 3vrd_B FCCB subunit, flavocyto 98.2 1.2E-06 4E-11 88.4 6.9 100 244-376 2-111 (401)
191 3cgb_A Pyridine nucleotide-dis 98.2 1.6E-06 5.5E-11 89.7 7.9 100 78-206 185-285 (480)
192 2qae_A Lipoamide, dihydrolipoy 98.2 2.9E-06 1E-10 87.4 9.9 101 78-206 173-279 (468)
193 1m6i_A Programmed cell death p 98.2 1.9E-06 6.4E-11 89.5 8.3 104 79-205 180-284 (493)
194 4b1b_A TRXR, thioredoxin reduc 98.2 1.9E-06 6.5E-11 90.0 8.3 100 78-206 222-322 (542)
195 3hyw_A Sulfide-quinone reducta 98.2 1.9E-06 6.6E-11 87.8 8.1 96 244-374 2-110 (430)
196 1xdi_A RV3303C-LPDA; reductase 98.2 2.5E-06 8.4E-11 88.7 9.1 100 79-206 182-282 (499)
197 3sx6_A Sulfide-quinone reducta 98.2 1.3E-06 4.6E-11 89.1 6.8 103 244-378 4-117 (437)
198 3lad_A Dihydrolipoamide dehydr 98.2 4.6E-06 1.6E-10 86.1 10.7 101 78-206 179-283 (476)
199 3h8l_A NADH oxidase; membrane 98.2 1.4E-06 4.6E-11 88.2 6.5 101 245-376 2-116 (409)
200 1mo9_A ORF3; nucleotide bindin 98.2 3.3E-06 1.1E-10 88.3 9.5 103 80-206 215-319 (523)
201 2zbw_A Thioredoxin reductase; 98.2 8.2E-06 2.8E-10 79.8 11.8 96 245-372 6-120 (335)
202 4at0_A 3-ketosteroid-delta4-5a 98.2 4.7E-06 1.6E-10 86.9 10.4 37 78-120 40-76 (510)
203 3ic9_A Dihydrolipoamide dehydr 98.2 4.5E-06 1.5E-10 86.6 10.2 101 78-207 173-278 (492)
204 2weu_A Tryptophan 5-halogenase 98.2 3.3E-06 1.1E-10 88.0 9.0 37 79-118 2-38 (511)
205 1dxl_A Dihydrolipoamide dehydr 98.2 2.3E-06 7.9E-11 88.2 7.7 101 78-206 176-282 (470)
206 1zk7_A HGII, reductase, mercur 98.2 2.6E-06 8.8E-11 87.8 8.0 98 79-206 176-274 (467)
207 3o0h_A Glutathione reductase; 98.2 3.9E-06 1.3E-10 86.9 9.3 102 78-207 190-292 (484)
208 2r0c_A REBC; flavin adenine di 98.2 3.1E-06 1E-10 89.1 8.2 36 78-119 25-60 (549)
209 3fbs_A Oxidoreductase; structu 98.1 8E-06 2.7E-10 78.2 10.3 99 245-376 3-115 (297)
210 2aqj_A Tryptophan halogenase, 98.1 4.4E-06 1.5E-10 87.7 9.0 37 79-118 5-41 (538)
211 3urh_A Dihydrolipoyl dehydroge 98.1 4.4E-06 1.5E-10 86.6 8.9 102 78-207 197-304 (491)
212 2qcu_A Aerobic glycerol-3-phos 98.1 3.2E-06 1.1E-10 87.9 7.8 34 79-118 3-36 (501)
213 3ab1_A Ferredoxin--NADP reduct 98.1 1.7E-05 5.6E-10 78.6 12.7 98 245-373 15-131 (360)
214 2q0l_A TRXR, thioredoxin reduc 98.1 1.3E-05 4.3E-10 77.6 11.1 98 246-376 3-117 (311)
215 2e4g_A Tryptophan halogenase; 98.1 6.6E-06 2.3E-10 86.5 9.7 38 78-118 24-61 (550)
216 3v76_A Flavoprotein; structura 98.1 7.9E-06 2.7E-10 82.7 9.6 96 245-373 28-187 (417)
217 2pyx_A Tryptophan halogenase; 98.1 1.1E-05 3.9E-10 84.3 11.1 40 79-118 7-52 (526)
218 4dna_A Probable glutathione re 98.1 8.5E-06 2.9E-10 83.8 10.0 102 78-207 169-272 (463)
219 3da1_A Glycerol-3-phosphate de 98.1 4.9E-06 1.7E-10 87.6 7.7 34 79-118 18-51 (561)
220 2q7v_A Thioredoxin reductase; 98.1 2.2E-05 7.4E-10 76.5 11.9 99 245-376 9-126 (325)
221 1trb_A Thioredoxin reductase; 98.1 1.1E-05 3.7E-10 78.4 9.6 99 79-206 145-250 (320)
222 3dk9_A Grase, GR, glutathione 98.1 1E-05 3.6E-10 83.5 9.9 102 79-206 187-296 (478)
223 3h28_A Sulfide-quinone reducta 98.1 2.3E-06 7.7E-11 87.2 4.7 99 245-376 3-112 (430)
224 2gjc_A Thiazole biosynthetic e 98.1 1E-05 3.5E-10 78.5 9.0 39 79-121 65-103 (326)
225 2xve_A Flavin-containing monoo 98.0 2.8E-05 9.6E-10 79.9 12.6 110 245-376 3-171 (464)
226 3nlc_A Uncharacterized protein 98.0 1.4E-05 4.8E-10 83.4 10.4 98 245-374 108-278 (549)
227 3d1c_A Flavin-containing putat 98.0 3.1E-05 1.1E-09 76.7 12.1 96 245-374 5-144 (369)
228 1pj5_A N,N-dimethylglycine oxi 98.0 6.4E-06 2.2E-10 91.1 7.7 35 79-119 4-39 (830)
229 2gv8_A Monooxygenase; FMO, FAD 98.0 1.8E-05 6E-10 81.0 10.5 104 244-376 6-182 (447)
230 1fl2_A Alkyl hydroperoxide red 98.0 1.7E-05 5.7E-10 76.7 9.7 101 246-375 3-117 (310)
231 3r9u_A Thioredoxin reductase; 98.0 3.2E-05 1.1E-09 74.7 11.6 100 244-376 4-121 (315)
232 2dkh_A 3-hydroxybenzoate hydro 98.0 1E-05 3.5E-10 86.6 8.7 37 78-119 31-67 (639)
233 3gwf_A Cyclohexanone monooxyge 98.0 2.3E-05 8E-10 82.0 11.0 36 78-119 177-212 (540)
234 2gqf_A Hypothetical protein HI 98.0 3.1E-05 1.1E-09 77.9 11.3 100 246-374 6-169 (401)
235 3alj_A 2-methyl-3-hydroxypyrid 98.0 4.3E-05 1.5E-09 76.2 12.2 96 244-374 11-161 (379)
236 1vdc_A NTR, NADPH dependent th 98.0 2E-05 6.9E-10 76.9 9.6 98 245-376 9-127 (333)
237 2h88_A Succinate dehydrogenase 98.0 1.8E-05 6.1E-10 84.1 9.5 34 79-118 18-51 (621)
238 1kf6_A Fumarate reductase flav 97.9 1.5E-05 5E-10 84.7 8.6 56 393-450 359-416 (602)
239 2wdq_A Succinate dehydrogenase 97.9 2.3E-05 7.7E-10 83.0 9.9 34 79-118 7-40 (588)
240 3dgh_A TRXR-1, thioredoxin red 97.9 1.9E-05 6.4E-10 81.7 9.0 101 78-206 186-292 (483)
241 3jsk_A Cypbp37 protein; octame 97.9 1.5E-05 5E-10 77.8 7.6 190 245-450 80-335 (344)
242 3k30_A Histamine dehydrogenase 97.9 2.4E-05 8.2E-10 84.6 10.0 98 78-204 522-625 (690)
243 3cty_A Thioredoxin reductase; 97.9 3.7E-05 1.3E-09 74.6 10.3 98 245-376 17-129 (319)
244 2x3n_A Probable FAD-dependent 97.9 3.3E-05 1.1E-09 77.6 10.1 98 245-374 7-167 (399)
245 2gjc_A Thiazole biosynthetic e 97.9 4.5E-05 1.6E-09 73.9 10.4 184 245-450 66-325 (326)
246 2a87_A TRXR, TR, thioredoxin r 97.9 5E-05 1.7E-09 74.3 11.0 99 244-376 14-129 (335)
247 4gde_A UDP-galactopyranose mut 97.9 5.5E-06 1.9E-10 86.2 4.2 42 78-124 9-50 (513)
248 4fk1_A Putative thioredoxin re 97.9 4.4E-05 1.5E-09 73.6 10.2 99 246-376 8-120 (304)
249 3l8k_A Dihydrolipoyl dehydroge 97.9 1.8E-05 6.1E-10 81.4 7.6 99 78-206 171-275 (466)
250 4ap3_A Steroid monooxygenase; 97.9 3.9E-05 1.3E-09 80.4 10.3 102 245-376 22-164 (549)
251 3dgz_A Thioredoxin reductase 2 97.9 3.3E-05 1.1E-09 79.9 9.6 101 78-206 184-290 (488)
252 1hyu_A AHPF, alkyl hydroperoxi 97.9 6E-05 2.1E-09 78.6 11.5 103 244-375 212-328 (521)
253 2b9w_A Putative aminooxidase; 97.8 1.3E-05 4.4E-10 81.3 5.8 41 78-124 5-46 (424)
254 2vou_A 2,6-dihydroxypyridine h 97.8 8.2E-05 2.8E-09 74.7 11.5 36 244-282 5-40 (397)
255 4gcm_A TRXR, thioredoxin reduc 97.8 8.3E-05 2.8E-09 71.9 10.5 98 246-377 8-120 (312)
256 4g6h_A Rotenone-insensitive NA 97.8 2.9E-05 9.8E-10 80.6 7.4 103 80-204 218-333 (502)
257 3qfa_A Thioredoxin reductase 1 97.8 5E-05 1.7E-09 79.2 9.3 105 79-206 210-318 (519)
258 2e1m_A L-glutamate oxidase; L- 97.8 2.3E-05 7.9E-10 77.8 6.3 41 77-123 42-83 (376)
259 3ihm_A Styrene monooxygenase A 97.8 1.5E-05 5.1E-10 81.2 4.8 35 78-118 21-55 (430)
260 1yvv_A Amine oxidase, flavin-c 97.8 0.00012 4E-09 71.5 11.2 34 245-281 3-36 (336)
261 3s5w_A L-ornithine 5-monooxyge 97.8 5.1E-05 1.8E-09 77.8 8.9 109 246-376 32-195 (463)
262 3cgv_A Geranylgeranyl reductas 97.8 0.00011 3.7E-09 73.4 11.1 100 245-373 5-162 (397)
263 3nks_A Protoporphyrinogen oxid 97.8 2E-05 6.9E-10 81.1 5.7 40 79-124 2-43 (477)
264 4a5l_A Thioredoxin reductase; 97.8 0.00014 4.7E-09 70.2 11.2 101 245-378 5-126 (314)
265 2ivd_A PPO, PPOX, protoporphyr 97.7 1.9E-05 6.6E-10 81.3 5.2 45 74-124 11-55 (478)
266 3uox_A Otemo; baeyer-villiger 97.7 6.7E-05 2.3E-09 78.6 9.3 102 245-376 10-152 (545)
267 1rsg_A FMS1 protein; FAD bindi 97.7 1.5E-05 5.2E-10 83.1 4.1 41 78-124 7-48 (516)
268 2vdc_G Glutamate synthase [NAD 97.7 2.4E-05 8.3E-10 80.1 5.4 66 243-311 121-195 (456)
269 2jae_A L-amino acid oxidase; o 97.7 3.8E-05 1.3E-09 79.4 6.7 41 77-123 9-49 (489)
270 1chu_A Protein (L-aspartate ox 97.7 8.5E-05 2.9E-09 77.8 9.4 57 393-450 354-411 (540)
271 2i0z_A NAD(FAD)-utilizing dehy 97.7 0.00013 4.5E-09 74.5 10.5 97 245-373 27-191 (447)
272 3nix_A Flavoprotein/dehydrogen 97.7 0.00012 4E-09 74.0 10.1 97 245-373 6-166 (421)
273 2bcg_G Secretory pathway GDP d 97.7 3.1E-05 1.1E-09 79.4 5.5 41 78-124 10-50 (453)
274 2x8g_A Thioredoxin glutathione 97.7 8E-05 2.7E-09 79.1 8.9 104 79-205 286-397 (598)
275 1k0i_A P-hydroxybenzoate hydro 97.7 0.00024 8.1E-09 71.1 11.9 99 246-374 4-164 (394)
276 1v0j_A UDP-galactopyranose mut 97.7 2.8E-05 9.6E-10 78.3 4.9 41 78-124 6-47 (399)
277 1ryi_A Glycine oxidase; flavop 97.7 0.00015 5.1E-09 72.1 10.2 32 245-279 18-49 (382)
278 3oz2_A Digeranylgeranylglycero 97.7 0.00018 6.2E-09 71.5 10.7 100 246-373 6-162 (397)
279 3qj4_A Renalase; FAD/NAD(P)-bi 97.7 0.00011 3.6E-09 72.2 8.7 33 245-280 2-37 (342)
280 3i6d_A Protoporphyrinogen oxid 97.6 1.9E-05 6.7E-10 80.9 3.4 45 79-123 5-49 (470)
281 1c0p_A D-amino acid oxidase; a 97.6 5.2E-05 1.8E-09 75.1 5.7 35 78-118 5-39 (363)
282 3rp8_A Flavoprotein monooxygen 97.6 0.00026 8.8E-09 71.2 10.5 35 244-281 23-57 (407)
283 3e1t_A Halogenase; flavoprotei 97.6 0.00033 1.1E-08 72.8 11.5 101 245-374 8-173 (512)
284 3c4a_A Probable tryptophan hyd 97.6 4.5E-05 1.5E-09 76.2 4.5 37 80-120 1-37 (381)
285 1ps9_A 2,4-dienoyl-COA reducta 97.6 0.00017 5.9E-09 77.6 9.3 103 78-204 493-629 (671)
286 1cjc_A Protein (adrenodoxin re 97.6 7.8E-05 2.7E-09 76.4 6.3 67 244-311 6-82 (460)
287 2yg5_A Putrescine oxidase; oxi 97.5 3.6E-05 1.2E-09 78.7 3.8 40 79-124 5-44 (453)
288 3hdq_A UDP-galactopyranose mut 97.5 6.3E-05 2.2E-09 75.2 5.4 41 77-123 27-67 (397)
289 2z3y_A Lysine-specific histone 97.5 4.3E-05 1.5E-09 82.1 4.4 41 76-122 104-144 (662)
290 3lov_A Protoporphyrinogen oxid 97.5 6.3E-05 2.1E-09 77.4 5.3 39 79-123 4-44 (475)
291 2gag_B Heterotetrameric sarcos 97.5 0.0005 1.7E-08 68.8 11.9 33 245-280 22-56 (405)
292 1sez_A Protoporphyrinogen oxid 97.5 7.1E-05 2.4E-09 77.6 5.7 41 78-124 12-52 (504)
293 2iid_A L-amino-acid oxidase; f 97.5 7.7E-05 2.6E-09 77.2 5.8 42 77-124 31-72 (498)
294 2uzz_A N-methyl-L-tryptophan o 97.5 0.00049 1.7E-08 68.1 11.5 33 245-280 3-35 (372)
295 1y56_B Sarcosine oxidase; dehy 97.5 0.00047 1.6E-08 68.5 11.3 32 245-279 6-37 (382)
296 2vvm_A Monoamine oxidase N; FA 97.5 6.2E-05 2.1E-09 77.9 5.0 39 80-124 40-78 (495)
297 2xag_A Lysine-specific histone 97.5 4.3E-05 1.5E-09 83.8 3.8 40 77-122 276-315 (852)
298 3i3l_A Alkylhalidase CMLS; fla 97.5 0.00051 1.8E-08 72.5 11.9 101 245-373 24-188 (591)
299 1y56_A Hypothetical protein PH 97.5 5.5E-05 1.9E-09 78.3 4.2 102 245-376 109-222 (493)
300 2bi7_A UDP-galactopyranose mut 97.5 9.3E-05 3.2E-09 74.0 5.7 39 79-123 3-41 (384)
301 2gf3_A MSOX, monomeric sarcosi 97.5 0.00064 2.2E-08 67.6 11.9 33 245-280 4-36 (389)
302 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00046 1.6E-08 72.8 11.2 97 245-374 29-182 (651)
303 2qa2_A CABE, polyketide oxygen 97.5 0.00086 2.9E-08 69.4 13.2 101 244-373 12-166 (499)
304 1qo8_A Flavocytochrome C3 fuma 97.5 0.00039 1.3E-08 73.2 10.5 34 245-281 122-155 (566)
305 3ihg_A RDME; flavoenzyme, anth 97.5 0.00042 1.4E-08 72.4 10.6 104 245-373 6-183 (535)
306 3ps9_A TRNA 5-methylaminomethy 97.5 0.00058 2E-08 73.6 11.9 33 245-280 273-305 (676)
307 1lqt_A FPRA; NADP+ derivative, 97.5 9.7E-05 3.3E-09 75.6 5.5 91 244-372 3-107 (456)
308 3fmw_A Oxygenase; mithramycin, 97.4 0.00035 1.2E-08 73.5 9.9 97 246-372 51-206 (570)
309 1i8t_A UDP-galactopyranose mut 97.4 8.2E-05 2.8E-09 73.9 4.6 38 80-123 2-39 (367)
310 1y0p_A Fumarate reductase flav 97.4 0.00048 1.6E-08 72.6 10.8 35 245-282 127-161 (571)
311 4dsg_A UDP-galactopyranose mut 97.4 0.00011 3.8E-09 75.8 5.3 42 77-124 7-49 (484)
312 2xdo_A TETX2 protein; tetracyc 97.4 0.00041 1.4E-08 69.5 9.3 36 244-282 26-61 (398)
313 1w4x_A Phenylacetone monooxyge 97.4 0.00069 2.3E-08 70.9 11.2 98 245-372 17-153 (542)
314 3g5s_A Methylenetetrahydrofola 97.4 0.00013 4.3E-09 72.0 5.0 48 399-455 320-367 (443)
315 3cp8_A TRNA uridine 5-carboxym 97.4 0.00091 3.1E-08 70.6 12.0 33 245-280 22-54 (641)
316 2qa1_A PGAE, polyketide oxygen 97.4 0.00097 3.3E-08 69.0 12.1 101 244-373 11-165 (500)
317 4hb9_A Similarities with proba 97.4 0.001 3.4E-08 66.6 11.6 34 246-282 3-36 (412)
318 3atr_A Conserved archaeal prot 97.4 0.00051 1.8E-08 70.2 9.6 103 245-374 7-163 (453)
319 3g3e_A D-amino-acid oxidase; F 97.4 9.3E-05 3.2E-09 72.8 3.8 39 80-118 1-39 (351)
320 2gag_A Heterotetrameric sarcos 97.3 0.00018 6.2E-09 80.5 6.4 90 79-205 284-385 (965)
321 1gte_A Dihydropyrimidine dehyd 97.3 0.00014 4.7E-09 82.1 4.9 93 244-374 187-289 (1025)
322 2zxi_A TRNA uridine 5-carboxym 97.3 0.00088 3E-08 70.5 10.6 32 246-280 29-60 (637)
323 3nyc_A D-arginine dehydrogenas 97.3 0.00059 2E-08 67.6 8.7 33 244-280 9-41 (381)
324 1o94_A Tmadh, trimethylamine d 97.3 0.00032 1.1E-08 76.2 7.2 96 79-204 528-647 (729)
325 3axb_A Putative oxidoreductase 97.3 9.8E-05 3.4E-09 75.3 2.9 36 78-119 22-58 (448)
326 3c4n_A Uncharacterized protein 97.2 0.00076 2.6E-08 67.8 9.2 32 245-279 37-70 (405)
327 2oln_A NIKD protein; flavoprot 97.2 0.0018 6.1E-08 64.7 11.8 33 245-280 5-37 (397)
328 3pvc_A TRNA 5-methylaminomethy 97.2 0.001 3.4E-08 71.8 10.3 33 245-280 265-297 (689)
329 1d4d_A Flavocytochrome C fumar 97.2 0.00086 2.9E-08 70.7 9.5 34 245-281 127-160 (572)
330 1d5t_A Guanine nucleotide diss 97.2 0.00027 9.2E-09 71.8 5.4 40 78-123 5-44 (433)
331 2gmh_A Electron transfer flavo 97.2 0.0024 8.4E-08 67.3 12.7 103 246-373 37-217 (584)
332 2rgh_A Alpha-glycerophosphate 97.1 0.0003 1E-08 74.2 4.7 35 79-119 32-66 (571)
333 3p1w_A Rabgdi protein; GDI RAB 97.1 0.00031 1.1E-08 71.7 4.7 41 77-123 18-58 (475)
334 1pn0_A Phenol 2-monooxygenase; 97.1 0.00042 1.4E-08 74.3 5.9 40 79-119 8-47 (665)
335 1b37_A Protein (polyamine oxid 97.0 0.00046 1.6E-08 70.9 5.2 39 79-123 4-43 (472)
336 2bs2_A Quinol-fumarate reducta 97.0 0.00041 1.4E-08 74.2 4.8 56 393-450 372-429 (660)
337 3c96_A Flavin-containing monoo 97.0 0.0031 1.1E-07 63.3 10.9 35 245-281 5-39 (410)
338 3dje_A Fructosyl amine: oxygen 97.0 0.0038 1.3E-07 63.2 11.6 33 245-280 7-40 (438)
339 4gut_A Lysine-specific histone 97.0 0.00043 1.5E-08 75.3 4.7 40 77-122 334-373 (776)
340 4at0_A 3-ketosteroid-delta4-5a 97.0 0.0037 1.3E-07 64.8 11.6 33 246-281 43-75 (510)
341 3gyx_A Adenylylsulfate reducta 96.9 0.00047 1.6E-08 73.7 4.1 45 400-451 446-490 (662)
342 3da1_A Glycerol-3-phosphate de 96.9 0.0045 1.5E-07 64.9 11.3 32 245-279 19-50 (561)
343 2qcu_A Aerobic glycerol-3-phos 96.9 0.0044 1.5E-07 64.1 11.0 33 245-280 4-36 (501)
344 1jnr_A Adenylylsulfate reducta 96.9 0.00066 2.3E-08 72.5 4.8 35 79-118 22-59 (643)
345 4g65_A TRK system potassium up 96.9 0.0017 5.9E-08 66.2 7.6 34 79-118 3-36 (461)
346 1kdg_A CDH, cellobiose dehydro 96.8 0.00076 2.6E-08 70.7 4.7 37 77-119 5-41 (546)
347 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00057 1.9E-08 73.1 3.3 42 79-120 56-100 (721)
348 2r0c_A REBC; flavin adenine di 96.7 0.01 3.5E-07 62.1 12.1 34 245-281 27-60 (549)
349 3lk7_A UDP-N-acetylmuramoylala 96.6 0.0013 4.6E-08 67.0 4.8 82 78-208 8-89 (451)
350 3t37_A Probable dehydrogenase; 96.6 0.0013 4.4E-08 68.5 4.4 36 79-119 17-52 (526)
351 2aqj_A Tryptophan halogenase, 96.6 0.012 4E-07 61.4 11.6 34 244-280 5-41 (538)
352 1pj5_A N,N-dimethylglycine oxi 96.5 0.01 3.6E-07 65.3 11.4 33 245-280 5-38 (830)
353 3c4a_A Probable tryptophan hyd 96.5 0.0022 7.5E-08 63.8 5.4 34 246-282 2-37 (381)
354 2dkh_A 3-hydroxybenzoate hydro 96.5 0.0087 3E-07 63.8 9.9 33 245-280 33-66 (639)
355 4b63_A L-ornithine N5 monooxyg 96.5 0.038 1.3E-06 56.9 14.5 147 245-418 40-257 (501)
356 2e5v_A L-aspartate oxidase; ar 96.4 0.0082 2.8E-07 61.5 9.3 31 246-279 1-31 (472)
357 3i6d_A Protoporphyrinogen oxid 96.4 0.017 5.9E-07 58.6 11.4 35 245-282 6-46 (470)
358 3q9t_A Choline dehydrogenase a 96.4 0.0022 7.4E-08 67.4 4.6 37 78-119 5-41 (577)
359 3qvp_A Glucose oxidase; oxidor 96.4 0.0022 7.4E-08 67.4 4.5 36 78-118 18-53 (583)
360 2e4g_A Tryptophan halogenase; 96.2 0.027 9.3E-07 58.8 11.8 34 244-280 25-61 (550)
361 2rgh_A Alpha-glycerophosphate 96.1 0.021 7.3E-07 59.9 10.6 33 245-280 33-65 (571)
362 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0083 2.8E-07 54.6 6.2 35 77-117 29-63 (223)
363 4gde_A UDP-galactopyranose mut 96.1 0.011 3.7E-07 61.0 7.9 35 245-282 11-46 (513)
364 3eag_A UDP-N-acetylmuramate:L- 96.0 0.011 3.8E-07 57.4 7.3 79 79-208 4-83 (326)
365 1coy_A Cholesterol oxidase; ox 96.0 0.0047 1.6E-07 63.9 4.9 38 77-120 9-46 (507)
366 1kf6_A Fumarate reductase flav 96.0 0.018 6.1E-07 60.9 9.3 32 246-280 7-40 (602)
367 1n4w_A CHOD, cholesterol oxida 96.0 0.0041 1.4E-07 64.4 4.2 37 79-121 5-41 (504)
368 3axb_A Putative oxidoreductase 96.0 0.037 1.3E-06 56.0 11.3 31 245-278 24-55 (448)
369 1pn0_A Phenol 2-monooxygenase; 96.0 0.03 1E-06 59.9 10.9 33 245-280 9-46 (665)
370 3fwz_A Inner membrane protein 95.9 0.011 3.6E-07 49.7 5.7 37 76-118 4-40 (140)
371 1ju2_A HydroxynitrIle lyase; f 95.9 0.0039 1.3E-07 65.0 3.5 35 78-119 25-59 (536)
372 3fim_B ARYL-alcohol oxidase; A 95.9 0.0035 1.2E-07 65.7 3.0 37 79-120 2-38 (566)
373 2jbv_A Choline oxidase; alcoho 95.6 0.0082 2.8E-07 62.7 4.5 38 78-120 12-49 (546)
374 4gut_A Lysine-specific histone 95.6 0.073 2.5E-06 57.8 12.0 36 244-282 336-371 (776)
375 3llv_A Exopolyphosphatase-rela 95.5 0.013 4.5E-07 49.0 4.8 34 79-118 6-39 (141)
376 2g1u_A Hypothetical protein TM 95.4 0.017 5.9E-07 49.2 5.4 36 78-119 18-53 (155)
377 2wdq_A Succinate dehydrogenase 95.3 0.1 3.5E-06 54.8 12.0 33 245-280 8-40 (588)
378 1id1_A Putative potassium chan 95.3 0.019 6.6E-07 48.8 5.3 34 79-118 3-36 (153)
379 1gpe_A Protein (glucose oxidas 95.3 0.011 3.8E-07 62.3 4.3 38 78-120 23-60 (587)
380 3ic5_A Putative saccharopine d 95.0 0.024 8.1E-07 45.4 4.7 34 79-118 5-39 (118)
381 1lss_A TRK system potassium up 95.0 0.027 9.1E-07 46.7 5.1 33 80-118 5-37 (140)
382 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.03 1E-06 50.8 5.1 51 244-307 31-81 (223)
383 2h88_A Succinate dehydrogenase 94.7 0.12 4.1E-06 54.6 10.4 32 246-280 20-51 (621)
384 3fpz_A Thiazole biosynthetic e 94.6 0.047 1.6E-06 52.7 6.4 67 244-313 65-141 (326)
385 2hmt_A YUAA protein; RCK, KTN, 94.5 0.031 1.1E-06 46.5 4.2 34 79-118 6-39 (144)
386 3kkj_A Amine oxidase, flavin-c 94.4 0.026 8.7E-07 52.0 4.0 34 246-282 4-37 (336)
387 2x5o_A UDP-N-acetylmuramoylala 94.3 0.028 9.5E-07 57.0 4.0 35 79-119 5-39 (439)
388 3lk7_A UDP-N-acetylmuramoylala 94.2 0.047 1.6E-06 55.5 5.7 55 244-309 9-63 (451)
389 1pjq_A CYSG, siroheme synthase 94.2 0.061 2.1E-06 54.7 6.5 35 78-118 11-45 (457)
390 3c85_A Putative glutathione-re 93.9 0.053 1.8E-06 47.5 4.6 35 78-118 38-73 (183)
391 2iid_A L-amino-acid oxidase; f 93.8 0.14 5E-06 52.3 8.6 59 244-305 33-109 (498)
392 3eag_A UDP-N-acetylmuramate:L- 93.7 0.049 1.7E-06 52.8 4.4 52 244-308 4-56 (326)
393 4dgk_A Phytoene dehydrogenase; 93.6 0.03 1E-06 57.6 2.9 35 245-282 2-36 (501)
394 1vg0_A RAB proteins geranylger 93.5 0.072 2.5E-06 56.2 5.6 40 78-123 7-46 (650)
395 1jnr_A Adenylylsulfate reducta 93.4 0.26 9E-06 52.3 9.8 32 246-280 24-59 (643)
396 1kyq_A Met8P, siroheme biosynt 93.2 0.05 1.7E-06 51.0 3.5 35 78-118 12-46 (274)
397 4dio_A NAD(P) transhydrogenase 93.2 0.091 3.1E-06 52.0 5.5 36 78-119 189-224 (405)
398 3vtf_A UDP-glucose 6-dehydroge 93.2 0.094 3.2E-06 52.7 5.6 39 74-118 16-54 (444)
399 3ado_A Lambda-crystallin; L-gu 92.8 0.078 2.7E-06 50.9 4.2 36 78-119 5-40 (319)
400 4e12_A Diketoreductase; oxidor 92.8 0.12 4.2E-06 48.8 5.6 35 79-119 4-38 (283)
401 3doj_A AT3G25530, dehydrogenas 92.8 0.11 3.9E-06 49.7 5.4 38 76-119 18-55 (310)
402 3l4b_C TRKA K+ channel protien 92.8 0.087 3E-06 47.6 4.3 32 81-118 2-33 (218)
403 4hv4_A UDP-N-acetylmuramate--L 92.7 0.14 4.9E-06 52.5 6.3 35 78-118 21-56 (494)
404 2dpo_A L-gulonate 3-dehydrogen 92.6 0.085 2.9E-06 50.8 4.2 36 78-119 5-40 (319)
405 3p2y_A Alanine dehydrogenase/p 92.4 0.1 3.5E-06 51.2 4.5 35 78-118 183-217 (381)
406 3i83_A 2-dehydropantoate 2-red 92.3 0.13 4.6E-06 49.4 5.2 33 80-118 3-35 (320)
407 3e8x_A Putative NAD-dependent 92.1 0.14 4.9E-06 46.5 5.0 37 76-118 18-55 (236)
408 1f0y_A HCDH, L-3-hydroxyacyl-C 92.1 0.17 6E-06 48.1 5.7 34 79-118 15-48 (302)
409 3oj0_A Glutr, glutamyl-tRNA re 92.0 0.1 3.5E-06 43.6 3.6 34 79-118 21-54 (144)
410 1lld_A L-lactate dehydrogenase 91.8 0.17 5.7E-06 48.6 5.2 34 79-118 7-42 (319)
411 2pyx_A Tryptophan halogenase; 91.7 0.11 3.8E-06 53.8 4.1 38 244-281 7-53 (526)
412 2ew2_A 2-dehydropantoate 2-red 91.5 0.18 6.2E-06 48.0 5.1 33 80-118 4-36 (316)
413 1x13_A NAD(P) transhydrogenase 91.4 0.19 6.4E-06 50.1 5.2 36 78-119 171-206 (401)
414 4ffl_A PYLC; amino acid, biosy 91.3 0.2 6.9E-06 49.0 5.4 35 79-119 1-35 (363)
415 2raf_A Putative dinucleotide-b 91.3 0.23 7.9E-06 44.5 5.3 36 78-119 18-53 (209)
416 1l7d_A Nicotinamide nucleotide 91.2 0.22 7.5E-06 49.3 5.5 36 78-119 171-206 (384)
417 3dtt_A NADP oxidoreductase; st 91.1 0.23 7.9E-06 45.7 5.2 38 76-119 16-53 (245)
418 3gg2_A Sugar dehydrogenase, UD 91.1 0.21 7E-06 50.6 5.3 33 80-118 3-35 (450)
419 3hn2_A 2-dehydropantoate 2-red 91.0 0.16 5.4E-06 48.7 4.1 33 80-118 3-35 (312)
420 3nrn_A Uncharacterized protein 90.9 0.17 5.7E-06 50.6 4.4 34 246-282 2-35 (421)
421 1pzg_A LDH, lactate dehydrogen 90.9 0.25 8.6E-06 47.8 5.4 35 79-119 9-44 (331)
422 2a9f_A Putative malic enzyme ( 90.8 0.2 6.8E-06 49.1 4.6 36 77-118 186-222 (398)
423 3g79_A NDP-N-acetyl-D-galactos 90.8 0.22 7.7E-06 50.6 5.1 35 79-119 18-54 (478)
424 1ks9_A KPA reductase;, 2-dehyd 90.7 0.25 8.5E-06 46.5 5.2 33 81-119 2-34 (291)
425 2weu_A Tryptophan 5-halogenase 90.7 0.13 4.5E-06 52.9 3.4 33 245-280 3-38 (511)
426 2y0c_A BCEC, UDP-glucose dehyd 90.6 0.24 8.1E-06 50.6 5.3 34 79-118 8-41 (478)
427 3ghy_A Ketopantoate reductase 90.6 0.23 7.8E-06 48.1 4.9 33 79-117 3-35 (335)
428 4hv4_A UDP-N-acetylmuramate--L 90.6 0.17 5.9E-06 51.9 4.2 51 244-308 22-73 (494)
429 1pjc_A Protein (L-alanine dehy 90.6 0.27 9.2E-06 48.2 5.4 34 79-118 167-200 (361)
430 2hjr_A Malate dehydrogenase; m 90.5 0.29 9.8E-06 47.3 5.5 35 79-119 14-49 (328)
431 2ewd_A Lactate dehydrogenase,; 90.5 0.25 8.6E-06 47.4 5.0 35 79-119 4-39 (317)
432 1bg6_A N-(1-D-carboxylethyl)-L 90.4 0.27 9.1E-06 47.9 5.3 34 79-118 4-37 (359)
433 3ka7_A Oxidoreductase; structu 90.3 0.19 6.4E-06 50.2 4.1 33 246-281 2-34 (425)
434 3k6j_A Protein F01G10.3, confi 90.3 0.36 1.2E-05 48.7 6.1 37 77-119 52-88 (460)
435 3gvi_A Malate dehydrogenase; N 90.2 0.32 1.1E-05 46.8 5.4 36 78-119 6-42 (324)
436 1vl6_A Malate oxidoreductase; 90.2 0.24 8.3E-06 48.4 4.6 35 77-117 190-225 (388)
437 3ius_A Uncharacterized conserv 90.2 0.27 9.3E-06 46.0 4.9 34 79-118 5-38 (286)
438 3ihm_A Styrene monooxygenase A 90.0 0.18 6E-06 50.8 3.6 34 244-280 22-55 (430)
439 1t2d_A LDH-P, L-lactate dehydr 90.0 0.35 1.2E-05 46.5 5.6 35 79-119 4-39 (322)
440 1zcj_A Peroxisomal bifunctiona 90.0 0.35 1.2E-05 49.1 5.8 35 78-118 36-70 (463)
441 3g3e_A D-amino-acid oxidase; F 89.9 0.29 9.8E-06 47.5 5.0 32 246-280 2-39 (351)
442 3dme_A Conserved exported prot 89.9 0.27 9.2E-06 47.7 4.8 35 245-282 5-39 (369)
443 2yg5_A Putrescine oxidase; oxi 89.9 0.39 1.3E-05 48.3 6.2 59 245-306 6-80 (453)
444 1pjq_A CYSG, siroheme synthase 89.9 0.34 1.1E-05 49.1 5.6 33 244-279 12-44 (457)
445 4a7p_A UDP-glucose dehydrogena 89.7 0.33 1.1E-05 48.9 5.4 35 79-119 8-42 (446)
446 2eez_A Alanine dehydrogenase; 89.7 0.35 1.2E-05 47.5 5.4 35 78-118 165-199 (369)
447 2b9w_A Putative aminooxidase; 89.7 0.24 8.3E-06 49.4 4.3 37 244-283 6-43 (424)
448 3tl2_A Malate dehydrogenase; c 89.6 0.38 1.3E-05 46.1 5.4 34 78-117 7-41 (315)
449 3g0o_A 3-hydroxyisobutyrate de 89.4 0.37 1.3E-05 45.8 5.3 34 79-118 7-40 (303)
450 3qha_A Putative oxidoreductase 89.4 0.28 9.6E-06 46.5 4.4 35 79-119 15-49 (296)
451 2v6b_A L-LDH, L-lactate dehydr 89.4 0.35 1.2E-05 46.1 5.1 33 80-118 1-35 (304)
452 3pef_A 6-phosphogluconate dehy 89.4 0.35 1.2E-05 45.6 5.0 34 80-119 2-35 (287)
453 3gpi_A NAD-dependent epimerase 89.3 0.37 1.3E-05 45.1 5.2 35 79-119 3-37 (286)
454 1guz_A Malate dehydrogenase; o 89.3 0.42 1.4E-05 45.7 5.5 35 81-119 2-36 (310)
455 3k96_A Glycerol-3-phosphate de 89.3 0.37 1.3E-05 47.1 5.1 34 79-118 29-62 (356)
456 1jw9_B Molybdopterin biosynthe 89.1 0.33 1.1E-05 44.9 4.5 34 79-118 31-65 (249)
457 1ur5_A Malate dehydrogenase; o 89.1 0.41 1.4E-05 45.7 5.3 33 80-118 3-36 (309)
458 3p7m_A Malate dehydrogenase; p 89.1 0.46 1.6E-05 45.6 5.6 36 78-119 4-40 (321)
459 3l9w_A Glutathione-regulated p 89.1 0.34 1.2E-05 48.3 4.9 34 79-118 4-37 (413)
460 2vns_A Metalloreductase steap3 89.1 0.37 1.3E-05 43.3 4.7 35 78-118 27-61 (215)
461 3g17_A Similar to 2-dehydropan 89.0 0.22 7.6E-06 47.2 3.3 33 80-118 3-35 (294)
462 3k7m_X 6-hydroxy-L-nicotine ox 89.0 0.27 9.3E-06 49.1 4.1 60 246-308 3-82 (431)
463 1z82_A Glycerol-3-phosphate de 89.0 0.4 1.4E-05 46.3 5.2 35 78-118 13-47 (335)
464 2pv7_A T-protein [includes: ch 88.9 0.55 1.9E-05 44.5 6.0 34 79-118 21-55 (298)
465 2vhw_A Alanine dehydrogenase; 88.9 0.43 1.5E-05 47.0 5.4 35 78-118 167-201 (377)
466 4dll_A 2-hydroxy-3-oxopropiona 88.8 0.39 1.3E-05 46.1 4.9 35 78-118 30-64 (320)
467 2e1m_A L-glutamate oxidase; L- 88.8 0.31 1.1E-05 48.0 4.3 61 243-306 43-130 (376)
468 1y6j_A L-lactate dehydrogenase 88.8 0.43 1.5E-05 45.8 5.2 34 79-118 7-42 (318)
469 1nyt_A Shikimate 5-dehydrogena 88.7 0.47 1.6E-05 44.3 5.3 35 78-118 118-152 (271)
470 1rsg_A FMS1 protein; FAD bindi 88.6 0.28 9.7E-06 50.5 4.0 37 244-283 8-45 (516)
471 3hn7_A UDP-N-acetylmuramate-L- 88.6 0.72 2.4E-05 47.6 7.1 78 79-208 19-97 (524)
472 2aef_A Calcium-gated potassium 88.6 0.25 8.7E-06 44.9 3.3 34 78-118 8-41 (234)
473 2jae_A L-amino acid oxidase; o 88.5 0.36 1.2E-05 49.2 4.7 37 244-283 11-47 (489)
474 2h78_A Hibadh, 3-hydroxyisobut 88.5 0.39 1.3E-05 45.6 4.7 34 79-118 3-36 (302)
475 2vvm_A Monoamine oxidase N; FA 88.5 0.77 2.6E-05 46.8 7.2 56 288-372 255-311 (495)
476 1chu_A Protein (L-aspartate ox 88.5 0.55 1.9E-05 48.7 6.1 34 79-119 8-41 (540)
477 1mv8_A GMD, GDP-mannose 6-dehy 88.2 0.38 1.3E-05 48.4 4.6 32 81-118 2-33 (436)
478 3d0o_A L-LDH 1, L-lactate dehy 88.2 0.46 1.6E-05 45.6 4.9 37 78-118 5-41 (317)
479 1c0p_A D-amino acid oxidase; a 88.1 0.36 1.2E-05 47.0 4.2 33 245-280 7-39 (363)
480 1hdo_A Biliverdin IX beta redu 88.0 0.61 2.1E-05 40.9 5.4 33 80-118 4-37 (206)
481 2o3j_A UDP-glucose 6-dehydroge 87.8 0.42 1.4E-05 48.8 4.7 36 79-118 9-44 (481)
482 4huj_A Uncharacterized protein 87.8 0.28 9.4E-06 44.3 3.0 34 79-118 23-57 (220)
483 3phh_A Shikimate dehydrogenase 87.8 0.61 2.1E-05 43.5 5.4 34 79-118 118-151 (269)
484 3hwr_A 2-dehydropantoate 2-red 87.8 0.54 1.8E-05 45.1 5.2 33 78-117 18-50 (318)
485 2pzm_A Putative nucleotide sug 87.7 0.69 2.4E-05 44.3 6.0 36 77-118 18-54 (330)
486 4ezb_A Uncharacterized conserv 87.7 0.47 1.6E-05 45.5 4.7 34 79-118 24-58 (317)
487 3pdu_A 3-hydroxyisobutyrate de 87.7 0.31 1.1E-05 45.9 3.4 34 80-119 2-35 (287)
488 2egg_A AROE, shikimate 5-dehyd 87.7 0.59 2E-05 44.3 5.3 35 78-118 140-175 (297)
489 2i6t_A Ubiquitin-conjugating e 87.6 0.48 1.7E-05 45.1 4.6 34 79-118 14-49 (303)
490 2g1u_A Hypothetical protein TM 87.4 0.57 2E-05 39.5 4.6 35 244-281 19-53 (155)
491 3pid_A UDP-glucose 6-dehydroge 87.3 0.6 2.1E-05 46.7 5.3 35 78-119 35-69 (432)
492 3r6d_A NAD-dependent epimerase 87.3 0.8 2.7E-05 40.9 5.8 33 79-117 5-39 (221)
493 3q2o_A Phosphoribosylaminoimid 87.2 0.79 2.7E-05 45.2 6.2 37 77-119 12-48 (389)
494 1ldn_A L-lactate dehydrogenase 87.2 0.6 2.1E-05 44.7 5.1 37 78-118 5-41 (316)
495 2q3e_A UDP-glucose 6-dehydroge 87.1 0.47 1.6E-05 48.2 4.5 35 80-118 6-40 (467)
496 3dhn_A NAD-dependent epimerase 87.1 0.61 2.1E-05 41.8 4.8 34 79-118 4-38 (227)
497 3pqe_A L-LDH, L-lactate dehydr 87.0 0.6 2E-05 44.9 4.9 34 79-118 5-40 (326)
498 1jay_A Coenzyme F420H2:NADP+ o 87.0 0.67 2.3E-05 41.2 5.1 32 81-118 2-34 (212)
499 3l6d_A Putative oxidoreductase 87.0 0.68 2.3E-05 44.1 5.3 35 78-118 8-42 (306)
500 4e21_A 6-phosphogluconate dehy 87.0 0.65 2.2E-05 45.3 5.3 35 78-118 21-55 (358)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.4e-50 Score=423.10 Aligned_cols=377 Identities=21% Similarity=0.332 Sum_probs=299.5
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHh--ccCCcE
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLL--ANTGVQ 153 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v~ 153 (500)
...+++|||||||+||+++|..|++ .+++|||||+++++.|+|+++.+..|.++..++..+++.+. .+.+++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~------~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~ 112 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT------KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVT 112 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT------TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh------CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeE
Confidence 3456899999999999999999987 68999999999999999999999999888888888887765 345799
Q ss_pred EEEeeEEEEecCCCCCCCCCceeecC-------------cEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCC
Q 010827 154 FFKDRVKLLCPSDHLGVNGPMACTHG-------------GTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFST 220 (500)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~-------------~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~ 220 (500)
|+.++|+.||++.+. +.+.. ......++.++.||+||||||+.|..+.+||.+++.+.+.+
T Consensus 113 ~~~~~v~~ID~~~k~------V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t 186 (502)
T 4g6h_A 113 YYEAEATSINPDRNT------VTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKE 186 (502)
T ss_dssp EEEEEEEEEEGGGTE------EEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSS
T ss_pred EEEEEEEEEEhhhCE------EEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCC
Confidence 999999999988763 11100 00112345689999999999999999999999888888999
Q ss_pred hHHHHHHHHHHHH-HHHhccCC------CCccEEEEECCChhHHHHHHHHHHHHhh-----------cCeEEEEecCCcc
Q 010827 221 LEDACRVDRKLSE-LERRNFGK------DSLIRVAVVGCGYSGVELAATVSERLEE-----------KGIVQAINVETTI 282 (500)
Q Consensus 221 ~~~~~~~~~~l~~-~~~~~~~~------~~~k~V~VvGgG~~g~e~A~~l~~~~~~-----------~~~vtlv~~~~~~ 282 (500)
.+|+..+++.+.. ++...... ....+++|||||++|+|+|..|++++.+ ...|+++++.+.+
T Consensus 187 ~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 187 IPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 9999988776532 22211100 0135899999999999999999886532 2349999999999
Q ss_pred CCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEee
Q 010827 283 CPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362 (500)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~ 362 (500)
++.+++.+.+.+++.|+++||++++++.|++++. +.+.+.....+....++++++
T Consensus 267 l~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~-------------------------~~~~~~~~~~dg~~~~~~i~a 321 (502)
T 4g6h_A 267 LNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEE-------------------------KQLLAKTKHEDGKITEETIPY 321 (502)
T ss_dssp STTSCHHHHHHHHHHHHHTTCEEETTEEEEEECS-------------------------SEEEEEEECTTSCEEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHhcceeeecCceEEEEeC-------------------------CceEEEEEecCcccceeeecc
Confidence 9999999999999999999999999999999987 444444321111112357999
Q ss_pred cEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHH
Q 010827 363 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAG 442 (500)
Q Consensus 363 D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa 442 (500)
|+||||+|.+|+ ++...+.. ..+...+.+|+|.||++||++++|||||+|||+.. +.|++++.|.+||+.+|
T Consensus 322 d~viwa~Gv~~~-~~~~~l~~-~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~------~~p~~a~~A~qqg~~~A 393 (502)
T 4g6h_A 322 GTLIWATGNKAR-PVITDLFK-KIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA------GLPPTAQVAHQEAEYLA 393 (502)
T ss_dssp SEEEECCCEECC-HHHHHHHH-HSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEES------SSCCCHHHHHHHHHHHH
T ss_pred CEEEEccCCcCC-HHHHhHHH-hccccccCCCceeECCccccCCCCCEEEEEcccCC------CCCCchHHHHHHHHHHH
Confidence 999999999998 22211100 12355678899999999999899999999999986 35789999999999999
Q ss_pred HHHHHH--------------------HCCCCCCCceecCceeEEEecCCCeeecCCcc--CceEEechhhHHhhhhh
Q 010827 443 WNLWAA--------------------INDRPLLPFRFQNLGEMMILGRNDAAVSPSFV--EGVTLDGPIGHSGKVLR 497 (500)
Q Consensus 443 ~~i~~~--------------------l~~~~~~p~~~~~~~~~~~~G~~~~~~~~~~~--~~~~~~g~~~~~~~~~~ 497 (500)
+||.+. +.++++.||.|.+.|.|++||.++||.+.... .++.+.|+++|++|+.+
T Consensus 394 ~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a~lG~~~av~~~~~~~~~~~~~~G~~a~~~w~~~ 470 (502)
T 4g6h_A 394 KNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRIL 470 (502)
T ss_dssp HHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEEECSTTCEEEEEEETTEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEEEEeCCceEEEccCCCccceecccHHHHHHHHHH
Confidence 999763 45678999999999999999999999985321 13567899999999864
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=8.3e-45 Score=373.85 Aligned_cols=361 Identities=21% Similarity=0.248 Sum_probs=289.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEee
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (500)
.++|||||||+||++||..|++++ ++++|||||+++++.|+|.++.+..|..+.+++..++++++++.+++|+.++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~----~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~ 77 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC
T ss_pred CCcEEEECCCHHHHHHHHHHhccC----cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeE
Confidence 368999999999999999999853 5799999999999999999999999999989999999999988999999999
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhc
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN 238 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (500)
|+.||++.+ +|++++|+++.||+||||||+++. +++||.+++...+++.+++.++++.+.++...
T Consensus 78 v~~Id~~~~-------------~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~- 142 (430)
T 3hyw_A 78 AESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYAN- 142 (430)
T ss_dssp EEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHS-
T ss_pred EEEEECCCC-------------EEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccC-
Confidence 999999887 699999999999999999999864 56899888888899999999999888776543
Q ss_pred cCCCCccEEEEECCC------hhHHHHHHHHHHHHhhcC-----eEEEEecCCccC---CCCCcchHHHHHHHHHhCCcE
Q 010827 239 FGKDSLIRVAVVGCG------YSGVELAATVSERLEEKG-----IVQAINVETTIC---PTGTPGNREAALKVLSARKVQ 304 (500)
Q Consensus 239 ~~~~~~k~V~VvGgG------~~g~e~A~~l~~~~~~~~-----~vtlv~~~~~~~---~~~~~~~~~~~~~~l~~~gV~ 304 (500)
+.++|+|++ ..+.|++..++....+.+ .+++++..+.+. ....+...+.+.+.++++||+
T Consensus 143 ------~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~ 216 (430)
T 3hyw_A 143 ------PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNID 216 (430)
T ss_dssp ------CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCE
T ss_pred ------CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeE
Confidence 355666554 345677777666655433 388888766543 234567778889999999999
Q ss_pred EEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCc
Q 010827 305 LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR 384 (500)
Q Consensus 305 i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~ 384 (500)
+++++.|++++. +++.++.. .++++++++|.+++++|.+|+ +++..++
T Consensus 217 ~~~~~~v~~v~~-------------------------~~~~~~~~----~g~~~~i~~d~vi~~~G~~~~-~~~~~~~-- 264 (430)
T 3hyw_A 217 WIANVAVKAIEP-------------------------DKVIYEDL----NGNTHEVPAKFTMFMPSFQGP-EVVASAG-- 264 (430)
T ss_dssp EECSCEEEEECS-------------------------SEEEEECT----TSCEEEEECSEEEEECEEECC-HHHHTTC--
T ss_pred EEeCceEEEEeC-------------------------CceEEEee----CCCceEeecceEEEeccCCCc-hHHHhcc--
Confidence 999999999987 56666532 235678999999999999998 5544432
Q ss_pred cCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCC----CCchHHHHHHHHHHHHHHHHHHHCCCCCCCceec
Q 010827 385 LHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQ 460 (500)
Q Consensus 385 ~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~ 460 (500)
..+..+.+|++.||+++|++++|||||+|||+..++..+.+ .|+++..|.+||+.+|+||.+.+.++++.++.+.
T Consensus 265 -~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~~~~ 343 (430)
T 3hyw_A 265 -DKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRL 343 (430)
T ss_dssp -TTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred -cccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 13445567889999999966999999999999987654433 4788999999999999999999999887654444
Q ss_pred CceeEEEecCCCeeecCC-----ccCceEEechhhHHhhhhh
Q 010827 461 NLGEMMILGRNDAAVSPS-----FVEGVTLDGPIGHSGKVLR 497 (500)
Q Consensus 461 ~~~~~~~~G~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~ 497 (500)
..++++++|.+.+++... +-..+...|+++||+|+..
T Consensus 344 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~ 385 (430)
T 3hyw_A 344 SAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAF 385 (430)
T ss_dssp CEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHH
T ss_pred cEEEEEEcCCCcEEEEEcccCCccccccccccHHHHHHHHHH
Confidence 566889999999987421 1113556688888777654
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=8.8e-44 Score=367.18 Aligned_cols=365 Identities=21% Similarity=0.201 Sum_probs=294.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEee
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (500)
+++|||||||+||+++|..|++... +|++|+|||+++.+.+.+.+.....+.....++...+.+++++.+++++.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~---~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~ 80 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALG---SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQS 80 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHG---GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSC
T ss_pred CCcEEEECCcHHHHHHHHHHhccCC---CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeE
Confidence 4799999999999999999998321 5899999999999999888888888887778888888999988999999999
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccc---cccCCCChHHHHHHHHHHHHHH
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAE---FAFPFSTLEDACRVDRKLSELE 235 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~---~~~~~~~~~~~~~~~~~l~~~~ 235 (500)
++.++++.+ .+.++++..+.||+||+|||++|..+.+||.++ +...+++.+++..+.+.+..+.
T Consensus 81 v~~id~~~~-------------~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 147 (437)
T 3sx6_A 81 AEQIDAEAQ-------------NITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL 147 (437)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC-------------EEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH
Confidence 999998766 588888888999999999999999999999863 4567889999988887766554
Q ss_pred HhccCCCCccEEEEECCChhH------HHHHHHHHHHHhhcCe------EEEEecCCccCC----CCCcchHHHHHHHHH
Q 010827 236 RRNFGKDSLIRVAVVGCGYSG------VELAATVSERLEEKGI------VQAINVETTICP----TGTPGNREAALKVLS 299 (500)
Q Consensus 236 ~~~~~~~~~k~V~VvGgG~~g------~e~A~~l~~~~~~~~~------vtlv~~~~~~~~----~~~~~~~~~~~~~l~ 299 (500)
. +++++|||+|+.+ +|+|..+++...+.+. |+++++.+.+.. .+ +.....+.+.|+
T Consensus 148 ~-------~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~ 219 (437)
T 3sx6_A 148 R-------EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLK 219 (437)
T ss_dssp H-------SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHH
T ss_pred h-------CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHH
Confidence 3 2467899986654 9999888877766553 999999887633 22 357888899999
Q ss_pred hCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCC--CccEEeecEEEEecCCCCCCCC
Q 010827 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGL--ESQIFEADLVLWTVGSKPLLPH 377 (500)
Q Consensus 300 ~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~--~~~~l~~D~vi~a~G~~p~~~~ 377 (500)
+.||++++++.|++|+. +.+.++.... ++. ++.++++|.+++++|++++..+
T Consensus 220 ~~gI~~~~~~~v~~v~~-------------------------~~v~~~~~~~-~g~~~~~~~i~~D~vv~~~g~~~~~~~ 273 (437)
T 3sx6_A 220 EEGIEAYTNCKVTKVED-------------------------NKMYVTQVDE-KGETIKEMVLPVKFGMMIPAFKGVPAV 273 (437)
T ss_dssp HTTCEEECSEEEEEEET-------------------------TEEEEEEECT-TSCEEEEEEEECSEEEEECCEECCHHH
T ss_pred HCCCEEEcCCEEEEEEC-------------------------CeEEEEeccc-CCccccceEEEEeEEEEcCCCcCchhh
Confidence 99999999999999987 4455542110 110 1678999999999999987444
Q ss_pred CCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCC----CCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 378 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 378 ~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~----~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
.... ++ .+++|+|.||+++|++++||||++|||+..+++.+.+ .|+++..|+.||+.+|.||.+.+.+++
T Consensus 274 ~~~~-----gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 274 AGVE-----GL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp HTST-----TT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred hccc-----cc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3322 34 6788999999999998999999999999976544433 478999999999999999999999999
Q ss_pred CCCceecCcee-EEEecCCCeeecC-----CccCceEEechhhHHhhhhhcC
Q 010827 454 LLPFRFQNLGE-MMILGRNDAAVSP-----SFVEGVTLDGPIGHSGKVLRRG 499 (500)
Q Consensus 454 ~~p~~~~~~~~-~~~~G~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~ 499 (500)
+.+|.++.... ++.+|...+++.. +...++.+.|++.|++|+.+++
T Consensus 348 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~ 399 (437)
T 3sx6_A 348 GEQTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEK 399 (437)
T ss_dssp CCCCCCSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHH
T ss_pred CCCcccCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHH
Confidence 88887776554 4669988776521 2234678899999999998764
No 4
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2e-41 Score=348.84 Aligned_cols=361 Identities=21% Similarity=0.253 Sum_probs=284.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEee
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (500)
+++|||||||+||+++|..|++++ +|++|+|||+++.+.+.+.+.....+.....++...+.+++++.+++++.++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~----~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~ 77 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC
T ss_pred CCCEEEECccHHHHHHHHHHHcCC----CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEE
Confidence 379999999999999999999942 6899999999999999888887777777777888888888888899999999
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhc
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN 238 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (500)
++.++++.+ .+.++++..+.||+||+|||++|..|.+. .......+++.+++..+.+.+..+..
T Consensus 78 v~~id~~~~-------------~v~~~~g~~i~~d~liiAtG~~~~~pg~~-~~g~~~~~~~~~~a~~~~~~~~~~~~-- 141 (430)
T 3h28_A 78 AESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLVFGAEG-QEENSTSICTAEHALETQKKLQELYA-- 141 (430)
T ss_dssp EEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEECCSBT-HHHHSCCCSSHHHHHHHHHHHHHHHH--
T ss_pred EEEEECCCC-------------EEEECCCcEEECCEEEEcCCcccccCCCC-CcCCccCcCCHHHHHHHHHHHHHHHh--
Confidence 999998765 57888888899999999999987665321 11334567888998888877665543
Q ss_pred cCCCCccEEEEECCChhH------HHHHHHHHHHHhhcC-----eEEEEecCCccCCC---CCcchHHHHHHHHHhCCcE
Q 010827 239 FGKDSLIRVAVVGCGYSG------VELAATVSERLEEKG-----IVQAINVETTICPT---GTPGNREAALKVLSARKVQ 304 (500)
Q Consensus 239 ~~~~~~k~V~VvGgG~~g------~e~A~~l~~~~~~~~-----~vtlv~~~~~~~~~---~~~~~~~~~~~~l~~~gV~ 304 (500)
+++++|||+|+.+ +|+|..+++...+.+ .|+++++.+.+... ..+.....+.+.|++.||+
T Consensus 142 -----~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~ 216 (430)
T 3h28_A 142 -----NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNID 216 (430)
T ss_dssp -----SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCE
T ss_pred -----cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 2467899987654 999988877665443 49999998766321 1235788889999999999
Q ss_pred EEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCc
Q 010827 305 LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR 384 (500)
Q Consensus 305 i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~ 384 (500)
+++++.|++|+. +.++++.. .++++++++|.|++++|++|+. ++...+
T Consensus 217 i~~~~~v~~v~~-------------------------~~v~~~~~----~~~g~~i~~D~vv~a~G~~~~~-~l~~~~-- 264 (430)
T 3h28_A 217 WIANVAVKAIEP-------------------------DKVIYEDL----NGNTHEVPAKFTMFMPSFQGPE-VVASAG-- 264 (430)
T ss_dssp EECSCEEEEECS-------------------------SEEEEECT----TSCEEEEECSEEEEECEEECCH-HHHTTC--
T ss_pred EEeCCEEEEEeC-------------------------CeEEEEec----CCCceEEeeeEEEECCCCccch-hHhhcc--
Confidence 999999999987 45555521 1247889999999999999873 343321
Q ss_pred cCCCCCCCCC-ceEeCCCcccCCCCCEEEecccccccCCCCCC----CCchHHHHHHHHHHHHHHHHHHHCCCCCCCcee
Q 010827 385 LHDLPLNARG-QAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRPLLPFRF 459 (500)
Q Consensus 385 ~~~~~~~~~g-~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~ 459 (500)
.++ .+++| +|.||+++|++++||||++|||+..+.+++.+ .|+++..|+.||+.+|+||.+.+.++++. +.+
T Consensus 265 -~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~-~~~ 341 (430)
T 3h28_A 265 -DKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK-YAP 341 (430)
T ss_dssp -TTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC-EEE
T ss_pred -ccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC-CcC
Confidence 135 67789 99999999998999999999999976544443 47899999999999999999999998764 677
Q ss_pred cCceeE-EEecCCCeeecC-----CccCceEEechhhHHhhhhhcC
Q 010827 460 QNLGEM-MILGRNDAAVSP-----SFVEGVTLDGPIGHSGKVLRRG 499 (500)
Q Consensus 460 ~~~~~~-~~~G~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~ 499 (500)
+....| +.+|...+++.. +...++.+.|++.|++|+.+++
T Consensus 342 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~ 387 (430)
T 3h28_A 342 RLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEK 387 (430)
T ss_dssp CCCEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHH
T ss_pred CcceEEEEEeCCCceEEEeCCCCCCccceeecccHHHHHHHHHHHH
Confidence 766655 569988776521 2234678899999999998875
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.1e-41 Score=344.73 Aligned_cols=308 Identities=18% Similarity=0.265 Sum_probs=258.6
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc-CcchhhhccccccCccccccHHHHhccCCcEEE
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (500)
.++.+|||||||+||++||..|+. .+++|+|||+++.++| .+.+..++.+.....++.....+++++.+++++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~ 80 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALG------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVI 80 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTT------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhC------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEE
Confidence 456899999999999999999954 7899999999998876 677777777777777777788888888999999
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHH
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSEL 234 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~ 234 (500)
.+ +|+.++++.+ .+++++++.+.||+||||||++|+.|++||.+ .++.+.+.+++..++..+..
T Consensus 81 ~~~~V~~id~~~~-------------~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~~- 145 (385)
T 3klj_A 81 TSEFATSIDPNNK-------------LVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECKN- 145 (385)
T ss_dssp CSCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHHH-
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhhc-
Confidence 87 8999998876 68888899999999999999999999999987 77778889998888776543
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++. +++...+.+.+.+++.||++++++.+++
T Consensus 146 ---------~~~vvVIGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 213 (385)
T 3klj_A 146 ---------KGKAFIIGGGILGIELAQAIIDSGTP---ASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEE 213 (385)
T ss_dssp ---------HSCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGG
T ss_pred ---------CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 57999999999999999999998877 9999999999887 7889999999999999999999877654
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
+ ++++++|.||+|+|++|+.++++..+ ++.+ +
T Consensus 214 i------------------------------------------g~~~~~D~vv~a~G~~p~~~~~~~~g-----l~~~-~ 245 (385)
T 3klj_A 214 M------------------------------------------GDLIRSSCVITAVGVKPNLDFIKDTE-----IASK-R 245 (385)
T ss_dssp C------------------------------------------HHHHHHSEEEECCCEEECCGGGTTSC-----CCBS-S
T ss_pred c------------------------------------------CeEEecCeEEECcCcccChhhhhhcC-----CCcC-C
Confidence 3 24577999999999999999887655 5554 4
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC-CCCceecC-ce-eEEEecC
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP-LLPFRFQN-LG-EMMILGR 470 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~-~~p~~~~~-~~-~~~~~G~ 470 (500)
| |.||+++|| +.|+|||+|||+..++ ..+..+..|..||+.+|.+|.+...... ..|+.+.. ++ .+.++|.
T Consensus 246 g-i~vd~~~~t-~~~~IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 319 (385)
T 3klj_A 246 G-ILVNDHMET-SIKDIYACGDVAEFYG----KNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGD 319 (385)
T ss_dssp S-EEECTTCBC-SSTTEEECGGGEEETT----BCCCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCEEEETTEEEEEESC
T ss_pred C-EEECCCccc-CCCCEEEEEeeEecCC----CcccHHHHHHHHHHHHHHHhcCCCcCCCCCCCcEEEEeCCCcEEEEcC
Confidence 4 999999999 9999999999998632 2356899999999999999987544332 24655553 44 6788885
Q ss_pred C
Q 010827 471 N 471 (500)
Q Consensus 471 ~ 471 (500)
.
T Consensus 320 ~ 320 (385)
T 3klj_A 320 I 320 (385)
T ss_dssp C
T ss_pred C
Confidence 3
No 6
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.9e-41 Score=345.38 Aligned_cols=324 Identities=21% Similarity=0.255 Sum_probs=260.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC--cchhhhccccccCccccccHHHHhccCCcEEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
+++|||||||+||++||..|++.+ ...+|+|||+++.++|. ++...++.+......+ ....+++++.+++++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g----~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~ 76 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEG----FEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLT 76 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT----CCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccC----cCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEe
Confidence 369999999999999999999942 22349999999988774 3444466666666665 5556677778999999
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~~ 234 (500)
+ +++.++...+ .+.+.++..+.||+||+|||++|+.|++||.+ +.++.+.+.+++..++..+.
T Consensus 77 ~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~-- 141 (410)
T 3ef6_A 77 GPEVTALDVQTR-------------TISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWT-- 141 (410)
T ss_dssp SCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCC--
T ss_pred CCEEEEEECCCC-------------EEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhc--
Confidence 8 9999998765 68888888999999999999999999999975 55667778888877766432
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
.+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|++
T Consensus 142 --------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 210 (410)
T 3ef6_A 142 --------SATRLLIVGGGLIGCEVATTARKLGLS---VTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVG 210 (410)
T ss_dssp --------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred --------cCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 268999999999999999999988776 9999999888764 6788899999999999999999999999
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
++.++ ....+.+. +++++++|.||+|+|.+|+.++++..+ ++.+ +
T Consensus 211 i~~~~-----------------------~~~~v~~~------dg~~i~aD~Vv~a~G~~p~~~l~~~~g-----l~~~-~ 255 (410)
T 3ef6_A 211 FSGEG-----------------------QLEQVMAS------DGRSFVADSALICVGAEPADQLARQAG-----LACD-R 255 (410)
T ss_dssp EECSS-----------------------SCCEEEET------TSCEEECSEEEECSCEEECCHHHHHTT-----CCBS-S
T ss_pred EeccC-----------------------cEEEEEEC------CCCEEEcCEEEEeeCCeecHHHHHhCC-----CccC-C
Confidence 98754 22233332 678999999999999999988876554 5665 4
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCCCCC-CCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecC-ce-eEEEecC
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN-LG-EMMILGR 470 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~-~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~-~~-~~~~~G~ 470 (500)
| |.||++++| +.|+||++|||+..+.+.|. ....++..|..||+.+|++|.+.....+..||.|.. ++ .+..+|.
T Consensus 256 g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~ 333 (410)
T 3ef6_A 256 G-VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGD 333 (410)
T ss_dssp S-EECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCCCCBCCEEEEEETTEEEEEESC
T ss_pred e-EEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCCCCCCCeeEEEECCceEEEEcC
Confidence 4 999999999 99999999999987543222 235568999999999999998765556667888876 34 4666674
No 7
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.3e-40 Score=339.87 Aligned_cols=302 Identities=19% Similarity=0.264 Sum_probs=245.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-cchhhhccccccCc--cccccHHHHhccCCcEEEE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PMLYELLSGEVDAW--EIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-~~~~~~~~g~~~~~--~~~~~~~~~~~~~~v~~~~ 156 (500)
+|||||||||||++||..|++++ ..++|+|||+++.+.+. +.++.++.+..... .+......++++.+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLD----KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKT 76 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHC----SSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEe
Confidence 47999999999999999999964 46789999999887664 44554444433222 2333445667778999987
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEE---cCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVL---LESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~---~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~ 232 (500)
+ +|+.++...+. ..+. ..++..+.||+||||||++|+.|++||. ..+.+.+.+++..+...+.
T Consensus 77 ~~~V~~id~~~~~-----------~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~--~~~~~~~~~~~~~l~~~~~ 143 (437)
T 4eqs_A 77 YHEVIAINDERQT-----------VSVLNRKTNEQFEESYDKLILSPGASANSLGFESD--ITFTLRNLEDTDAIDQFIK 143 (437)
T ss_dssp TEEEEEEETTTTE-----------EEEEETTTTEEEEEECSEEEECCCEEECCCCCCCT--TEECCSSHHHHHHHHHHHH
T ss_pred CCeEEEEEccCcE-----------EEEEeccCCceEEEEcCEEEECCCCccccccccCc--eEEeeccHHHHHHHHHhhh
Confidence 5 89999987663 1111 1233478999999999999999999983 4556778888887766543
Q ss_pred HHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 233 ~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
.. . +++++|||+|.+|+|+|..+++.+.+ ||++++.+.+++.++++..+.+.+.++++||++++++.|+
T Consensus 144 ~~---~-----~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~ 212 (437)
T 4eqs_A 144 AN---Q-----VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIN 212 (437)
T ss_dssp HH---T-----CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEE
T ss_pred cc---C-----CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEE
Confidence 31 1 67999999999999999999999887 9999999999999999999999999999999999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~ 392 (500)
+++. +.+.++ +++++++|.||+|+|.+||+++++.. ++++++
T Consensus 213 ~~~~-------------------------~~v~~~--------~g~~~~~D~vl~a~G~~Pn~~~~~~~-----gl~~~~ 254 (437)
T 4eqs_A 213 AING-------------------------NEITFK--------SGKVEHYDMIIEGVGTHPNSKFIESS-----NIKLDR 254 (437)
T ss_dssp EEET-------------------------TEEEET--------TSCEEECSEEEECCCEEESCGGGTTS-----SCCCCT
T ss_pred EecC-------------------------Ceeeec--------CCeEEeeeeEEEEeceecCcHHHHhh-----hhhhcc
Confidence 9876 556664 77899999999999999999888765 488899
Q ss_pred CCceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHHH
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
+|+|.||+++|| +.|+|||+|||+..++. .+. ..+..+..|.+||+.+|.||.+.
T Consensus 255 ~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 255 KGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp TSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred CCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 999999999999 99999999999987654 232 23578899999999999999863
No 8
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.8e-40 Score=337.86 Aligned_cols=325 Identities=24% Similarity=0.316 Sum_probs=264.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCe--EEEEcCCCCcccC--cchhhhccccccCccccccHHHHhccCCcE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQ--VLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQ 153 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~--V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 153 (500)
++++|||||||+||++||..|++ .|++ |+|||+++.++|. ++...++.+......+......++.+.+++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~------~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 81 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ------NGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVE 81 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEE
T ss_pred CCCcEEEECChHHHHHHHHHHHc------cCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcE
Confidence 45899999999999999999999 4555 9999999987774 344456666666666666777888888999
Q ss_pred EEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHH
Q 010827 154 FFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKL 231 (500)
Q Consensus 154 ~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l 231 (500)
++.+ +++.++...+ .+.++++..+.||+||+|||++|+.|++||.+ ..++.+.+.+++..+...+
T Consensus 82 ~~~~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~ 148 (415)
T 3lxd_A 82 MKLGAEVVSLDPAAH-------------TVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAEL 148 (415)
T ss_dssp EEETCCEEEEETTTT-------------EEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHH
T ss_pred EEeCCEEEEEECCCC-------------EEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHh
Confidence 9998 9999998765 68888888999999999999999999999975 5566777888887776654
Q ss_pred HHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCce
Q 010827 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYF 310 (500)
Q Consensus 232 ~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~ 310 (500)
.. .+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.
T Consensus 149 ~~---------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 216 (415)
T 3lxd_A 149 DA---------GAKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAA 216 (415)
T ss_dssp HT---------TCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCC
T ss_pred hh---------cCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCE
Confidence 21 057999999999999999999998876 9999999988875 6888999999999999999999999
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcce-eEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~ 389 (500)
|+++..++ +++ .+.+. +++++++|.||+|+|.+|+.++++..+ ++
T Consensus 217 v~~i~~~~-----------------------~~v~~v~l~------dG~~i~aD~Vv~a~G~~p~~~l~~~~g-----l~ 262 (415)
T 3lxd_A 217 MDCIEGDG-----------------------TKVTGVRMQ------DGSVIPADIVIVGIGIVPCVGALISAG-----AS 262 (415)
T ss_dssp EEEEEESS-----------------------SBEEEEEES------SSCEEECSEEEECSCCEESCHHHHHTT-----CC
T ss_pred EEEEEecC-----------------------CcEEEEEeC------CCCEEEcCEEEECCCCccChHHHHhCC-----CC
Confidence 99998754 333 34332 678999999999999999988876544 55
Q ss_pred CCCCCceEeCCCcccCCCCCEEEecccccccCC-C-CC-CCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc-e-e
Q 010827 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-S-GR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-E 464 (500)
Q Consensus 390 ~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~-~~-~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~~-~-~ 464 (500)
.+ +| |.||++++| +.|+|||+|||+..+.+ . |. ....++..|..||+.+|++|.+.-...+..||.|..+ + .
T Consensus 263 ~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~ 339 (415)
T 3lxd_A 263 GG-NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVPYKATPWFWSNQYDLK 339 (415)
T ss_dssp CS-SS-EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEETTEE
T ss_pred cC-CC-EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCCCCCCCeeEeeeCCcE
Confidence 55 45 999999999 99999999999987542 1 22 2345789999999999999987655566778888764 3 5
Q ss_pred EEEecC
Q 010827 465 MMILGR 470 (500)
Q Consensus 465 ~~~~G~ 470 (500)
+..+|.
T Consensus 340 ~~~~G~ 345 (415)
T 3lxd_A 340 LQTVGL 345 (415)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 667774
No 9
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-40 Score=333.76 Aligned_cols=312 Identities=20% Similarity=0.285 Sum_probs=248.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc-CcchhhhccccccCccccccHHHHhccCCcEEEE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
...+|+||||||||++||..|++ .| +|+|||+++...+ ++.+...+.+..+...+.....+++++.+++++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~------~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 79 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQ------TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRL 79 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTT------TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEEC
T ss_pred CCCcEEEECCcHHHHHHHHHHhh------cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEE
Confidence 34799999999999999999988 57 9999999987655 4566666666666666766777788888999998
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (500)
+ +|+.+++..+ .+. .++.++.||+||||||++|..|++|| .+.++.+.+.+++..+++.+..
T Consensus 80 g~~v~~id~~~~-------------~V~-~~g~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~~-- 142 (367)
T 1xhc_A 80 AEEAKLIDRGRK-------------VVI-TEKGEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIEN-- 142 (367)
T ss_dssp SCCEEEEETTTT-------------EEE-ESSCEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHHH--
T ss_pred CCEEEEEECCCC-------------EEE-ECCcEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhhc--
Confidence 7 6999988754 566 56778999999999999999999999 4556677788888777665432
Q ss_pred HhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEe
Q 010827 236 RRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIR 315 (500)
Q Consensus 236 ~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~ 315 (500)
+++++|||+|.+|+|+|..|++.+.+ |+++++.+.+++ +++++.+.+.+.|++.||++++++.|++++
T Consensus 143 --------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~ 210 (367)
T 1xhc_A 143 --------SGEAIIIGGGFIGLELAGNLAEAGYH---VKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEAN 210 (367)
T ss_dssp --------HSEEEEEECSHHHHHHHHHHHHTTCE---EEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEEC
T ss_pred --------CCcEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE
Confidence 47999999999999999999998876 999999999888 889999999999999999999999999997
Q ss_pred cCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCc
Q 010827 316 RVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQ 395 (500)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~ 395 (500)
. +.++++ +++ +++|.||+|+|++|+.++++..+ ++.+ +|
T Consensus 211 ~-------------------------~~v~~~--------~g~-i~~D~vi~a~G~~p~~~ll~~~g-----l~~~-~g- 249 (367)
T 1xhc_A 211 E-------------------------EGVLTN--------SGF-IEGKVKICAIGIVPNVDLARRSG-----IHTG-RG- 249 (367)
T ss_dssp S-------------------------SEEEET--------TEE-EECSCEEEECCEEECCHHHHHTT-----CCBS-SS-
T ss_pred e-------------------------eEEEEC--------CCE-EEcCEEEECcCCCcCHHHHHhCC-----CCCC-CC-
Confidence 4 455553 555 99999999999999988765543 5554 45
Q ss_pred eEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCC-CCcee-cC-ceeEEEecCC
Q 010827 396 AETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL-LPFRF-QN-LGEMMILGRN 471 (500)
Q Consensus 396 i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~-~p~~~-~~-~~~~~~~G~~ 471 (500)
|.||+++|| +.|+|||+|||+.... ..+.++..|..||+.+|.+|.+....... .|+.. .. -..+.++|..
T Consensus 250 i~Vd~~~~t-~~~~IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~ 323 (367)
T 1xhc_A 250 ILIDDNFRT-SAKDVYAIGDCAEYSG----IIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGNT 323 (367)
T ss_dssp EECCTTSBC-SSTTEEECGGGEEBTT----BCCCSHHHHHHHHHHHHHHHTTCCCCCCSSCCEEEEEETTEEEEEEECC
T ss_pred EEECCCccc-CCCCEEEeEeeeecCC----CCccHHHHHHHHHHHHHHHhcCCCccCCCCCCceEEEECCceEEEECCC
Confidence 999999999 9999999999987521 12468899999999999999753221111 22211 11 2267788854
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.9e-40 Score=337.43 Aligned_cols=323 Identities=23% Similarity=0.343 Sum_probs=262.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCCCcccC--cchhhhccccccCccccccHHHHhccCCcEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQF 154 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 154 (500)
+++|||||||+||++||..|++ .|+ +|+|||+++.++|. ++...++.+......+......++.+.++++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~------~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 74 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQ------AKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIEL 74 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEE
T ss_pred CCCEEEEcChHHHHHHHHHHHh------hCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEE
Confidence 3789999999999999999999 456 89999999987773 3444566666666677777778888889999
Q ss_pred EEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHH
Q 010827 155 FKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSE 233 (500)
Q Consensus 155 ~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~ 233 (500)
+..+++.++...+ .+.++++..+.||+||+|||++|+.|++||.+ ..++.+.+..++..+...+..
T Consensus 75 ~~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~ 141 (404)
T 3fg2_P 75 ISDRMVSIDREGR-------------KLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPD 141 (404)
T ss_dssp ECCCEEEEETTTT-------------EEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGG
T ss_pred EEEEEEEEECCCC-------------EEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhc
Confidence 9899999998765 68888888999999999999999999999975 456667788887777665422
Q ss_pred HHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 234 ~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|+
T Consensus 142 ----------~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 208 (404)
T 3fg2_P 142 ----------KKHVVVIGAGFIGLEFAATARAKGLE---VDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRAT 208 (404)
T ss_dssp ----------CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred ----------CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEE
Confidence 68999999999999999999988776 9999999988875 688899999999999999999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcce-eEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~ 391 (500)
++..++ +++ .+.+. +++++++|.||+|+|.+|+.++++..+ ++.+
T Consensus 209 ~i~~~~-----------------------~~v~~V~~~------dG~~i~aD~Vv~a~G~~p~~~l~~~~g-----l~~~ 254 (404)
T 3fg2_P 209 EIAAEG-----------------------DRVTGVVLS------DGNTLPCDLVVVGVGVIPNVEIAAAAG-----LPTA 254 (404)
T ss_dssp EEEEET-----------------------TEEEEEEET------TSCEEECSEEEECCCEEECCHHHHHTT-----CCBS
T ss_pred EEEecC-----------------------CcEEEEEeC------CCCEEEcCEEEECcCCccCHHHHHhCC-----CCCC
Confidence 998754 222 24332 678999999999999999988876544 5555
Q ss_pred CCCceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc-e-eEEE
Q 010827 392 ARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMI 467 (500)
Q Consensus 392 ~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~~-~-~~~~ 467 (500)
+| |.||++++| +.|+|||+|||+..+.+ .|. ....++..|..||+.+|++|.+.-...+..||.|..+ + .+..
T Consensus 255 -~G-i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~ 331 (404)
T 3fg2_P 255 -AG-IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQI 331 (404)
T ss_dssp -SS-EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEEETTEEEEE
T ss_pred -CC-EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCCCCCCCceEeEECCcEEEE
Confidence 45 999999999 99999999999987542 222 1244689999999999999987655566778888764 3 4566
Q ss_pred ecC
Q 010827 468 LGR 470 (500)
Q Consensus 468 ~G~ 470 (500)
+|.
T Consensus 332 ~G~ 334 (404)
T 3fg2_P 332 VGL 334 (404)
T ss_dssp EEC
T ss_pred EeC
Confidence 663
No 11
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.6e-39 Score=332.13 Aligned_cols=318 Identities=22% Similarity=0.261 Sum_probs=247.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-cc-hhhhccccccCccccccHHHHhccCCcEEE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PM-LYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (500)
.+++|+|||||+||+++|..|++.+ ...+|+|||++++++|. +. ...++.+.. ...+... ++++.+++++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAG----YQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRLD---CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHT----CCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBCC---CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccC----CCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhHH---HHHHCCCEEE
Confidence 4579999999999999999999942 22369999999877653 22 223333332 2222111 4567789999
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC-CCccccccCCCChHHHHHHHHHHHH
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV-PGAAEFAFPFSTLEDACRVDRKLSE 233 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i-~G~~~~~~~~~~~~~~~~~~~~l~~ 233 (500)
.+ +|+.++...+ .+.++++..+.||+||+|||++|..|++ ||.++.++.+.+.+++..+...+.
T Consensus 78 ~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~- 143 (408)
T 2gqw_A 78 LGVTAQSFDPQAH-------------TVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLR- 143 (408)
T ss_dssp ETCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCC-
T ss_pred cCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhh-
Confidence 98 5999987654 6777788899999999999999999999 997655666678888776654321
Q ss_pred HHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 234 ~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
.+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|+
T Consensus 144 ---------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 211 (408)
T 2gqw_A 144 ---------PQSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVT 211 (408)
T ss_dssp ---------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEE
T ss_pred ---------cCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEE
Confidence 168999999999999999999988776 9999999998885 788999999999999999999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~ 392 (500)
+++. +.+++. +++++++|.||+|+|++|+.++++..+ ++++
T Consensus 212 ~i~~-------------------------~~v~~~--------~g~~i~~D~vi~a~G~~p~~~l~~~~g-----l~~~- 252 (408)
T 2gqw_A 212 GSVD-------------------------GVVLLD--------DGTRIAADMVVVGIGVLANDALARAAG-----LACD- 252 (408)
T ss_dssp EEET-------------------------TEEEET--------TSCEEECSEEEECSCEEECCHHHHHHT-----CCBS-
T ss_pred EEEC-------------------------CEEEEC--------CCCEEEcCEEEECcCCCccHHHHHhCC-----CCCC-
Confidence 9982 434443 567899999999999999988776543 5555
Q ss_pred CCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHHHHHHHHHHHHHHHC-CCCCCCceecCc-e-eEEE
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAAIN-DRPLLPFRFQNL-G-EMMI 467 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~~g~~aa~~i~~~l~-~~~~~p~~~~~~-~-~~~~ 467 (500)
+| |.||+++|| +.|+|||+|||+..+.+ .|.+ ...++..|..||+.+|.+|.+... ..+..|+.+..+ + .+..
T Consensus 253 ~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~p~~~~~~~~~~~~~ 330 (408)
T 2gqw_A 253 DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQV 330 (408)
T ss_dssp SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSCCCCCCCEEEEEETTEEEEE
T ss_pred CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCCcCCCCCeEEEEECCceEEE
Confidence 45 999999999 99999999999987432 1221 134788999999999999987655 556677777652 2 5666
Q ss_pred ecC
Q 010827 468 LGR 470 (500)
Q Consensus 468 ~G~ 470 (500)
+|.
T Consensus 331 ~G~ 333 (408)
T 2gqw_A 331 AGL 333 (408)
T ss_dssp EEC
T ss_pred ECC
Confidence 664
No 12
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.8e-39 Score=329.82 Aligned_cols=312 Identities=21% Similarity=0.328 Sum_probs=257.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEeeE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRV 159 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~v 159 (500)
++|||||||+|||++|..|++.. .+|++|+|||+++.+.+.+.+.....+.....++...+.+.+++.+++++.++|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~---~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v 78 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV---GSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTV 78 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH---GGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeE
Confidence 68999999999999999999821 158899999999998888887777777778888888999999989999999999
Q ss_pred EEEecCCCCCCCCCceeecCcEEEcCCcc----EEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHH
Q 010827 160 KLLCPSDHLGVNGPMACTHGGTVLLESGL----IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (500)
Q Consensus 160 ~~i~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (500)
+.++.+.+ .+.+.++. .+.||+||+|||++|..|.+||.++....+++.+++..+.+.+..+
T Consensus 79 ~~i~~~~~-------------~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~- 144 (409)
T 3h8l_A 79 EKIDAKSS-------------MVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF- 144 (409)
T ss_dssp EEEETTTT-------------EEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC-
T ss_pred EEEeCCCC-------------EEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh-
Confidence 99988765 46555554 3999999999999999999999876666677888888887766542
Q ss_pred HhccCCCCccEEEEECCCh-------------------------hHHHHHHHHHHHHhhcC-----eEEEEecCCccCCC
Q 010827 236 RRNFGKDSLIRVAVVGCGY-------------------------SGVELAATVSERLEEKG-----IVQAINVETTICPT 285 (500)
Q Consensus 236 ~~~~~~~~~k~V~VvGgG~-------------------------~g~e~A~~l~~~~~~~~-----~vtlv~~~~~~~~~ 285 (500)
.++++|||+|. .++|+|..+++...+.+ .|+++++.+ +++.
T Consensus 145 --------~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~ 215 (409)
T 3h8l_A 145 --------QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD 215 (409)
T ss_dssp --------CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT
T ss_pred --------cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc
Confidence 24677999992 58899988887776554 599999988 7778
Q ss_pred CCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEE
Q 010827 286 GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (500)
Q Consensus 286 ~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~v 365 (500)
+++.+.+.+.+.+++.||++++++.|++++. ++++++ +++++++|.|
T Consensus 216 ~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~-------------------------~~v~~~--------~g~~~~~D~v 262 (409)
T 3h8l_A 216 LSPNSRKAVASIYNQLGIKLVHNFKIKEIRE-------------------------HEIVDE--------KGNTIPADIT 262 (409)
T ss_dssp BCHHHHHHHHHHHHHHTCEEECSCCEEEECS-------------------------SEEEET--------TSCEEECSEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEcCCceEEECC-------------------------CeEEEC--------CCCEEeeeEE
Confidence 8889999999999999999999999999987 455554 6788999999
Q ss_pred EEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 010827 366 LWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL 445 (500)
Q Consensus 366 i~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 445 (500)
|+++|++|+ +++...+. ++ .+++|++.||+++|+++.||||++|||+.. +.++++..|..||+.+|++|
T Consensus 263 i~a~G~~~~-~~l~~~~~---~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~------~~~~~~~~A~~q~~~aa~~i 331 (409)
T 3h8l_A 263 ILLPPYTGN-PALKNSTP---DL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSM------TVPKLGYLAVMTGRIAAQHL 331 (409)
T ss_dssp EEECCEECC-HHHHTSCG---GG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTT------CCSCCHHHHHHHHHHHHHHH
T ss_pred EECCCCCcc-HHHHhccc---cC-cCCCCCEEeCcccccCCCCCEEEeehhccC------CCCcHHHHHHHHHHHHHHHH
Confidence 999999998 56655421 12 467899999999999889999999999985 23788999999999999999
Q ss_pred HHHHC-CCCCCCceecC
Q 010827 446 WAAIN-DRPLLPFRFQN 461 (500)
Q Consensus 446 ~~~l~-~~~~~p~~~~~ 461 (500)
.+.+. +.+..+|.+..
T Consensus 332 ~~~l~~~~~~~~~~~~~ 348 (409)
T 3h8l_A 332 ANRLGVPTKVDKYYPTI 348 (409)
T ss_dssp HHHTTCCCCCCCCCCCC
T ss_pred HHHhcCCCCccccCCEE
Confidence 99994 44556666543
No 13
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.6e-39 Score=331.78 Aligned_cols=321 Identities=18% Similarity=0.200 Sum_probs=251.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEee
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (500)
.|||||||||+||++||.+|++.+ .+++|+|||+++.+.++++++.++.|..+.+.+..+++.+. +.++++++++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~----~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD----PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC----cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCEEEEeE
Confidence 479999999999999999999853 57899999999999999999998888888888887777665 5699999999
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccc-----ccCCCChHHHHHHHHHHHH
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF-----AFPFSTLEDACRVDRKLSE 233 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~-----~~~~~~~~~~~~~~~~l~~ 233 (500)
|+.||++.+ .+.+.++.++.||+||+|||+++..+.+||..+. .+.+.+.+++..+++.+..
T Consensus 77 v~~id~~~~-------------~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 77 ALGIDPDKK-------------LVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred EEEEEccCc-------------EEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 999999877 5888899999999999999999999999997543 3446677888888777665
Q ss_pred HHHhccCCCCccEEEEEC------CChhHHHHHHHHHHHHhhcC---eEEEEecCCccCC--CCCcchHHHHHHHHHhCC
Q 010827 234 LERRNFGKDSLIRVAVVG------CGYSGVELAATVSERLEEKG---IVQAINVETTICP--TGTPGNREAALKVLSARK 302 (500)
Q Consensus 234 ~~~~~~~~~~~k~V~VvG------gG~~g~e~A~~l~~~~~~~~---~vtlv~~~~~~~~--~~~~~~~~~~~~~l~~~g 302 (500)
+.. +..+++.+ ++..+.|.+.+++.+....+ .|++++..+.+.. .+++.+.+.+.+.+++.|
T Consensus 144 ~~~-------~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 216 (401)
T 3vrd_B 144 MDD-------GGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENAL 216 (401)
T ss_dssp SCT-------TCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCS
T ss_pred ccc-------CCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcC
Confidence 432 23444433 34556666666665544322 4899988776532 233444555556678899
Q ss_pred cEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCC
Q 010827 303 VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPN 382 (500)
Q Consensus 303 V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~ 382 (500)
|++++++.+..++.+. +...+++. +++++++|.+++++|.+|+ ++++.++
T Consensus 217 i~v~~~~~v~~v~~~~-----------------------~~~~v~~~------~g~~i~~D~vi~~~g~~~~-~~~~~~g 266 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDT-----------------------EAMTVETS------FGETFKAAVINLIPPQRAG-KIAQSAS 266 (401)
T ss_dssp EEEECTTTTCEEEEET-----------------------TTTEEEET------TSCEEECSEEEECCCEEEC-HHHHHTT
T ss_pred cEEEeCceEEEEEecc-----------------------cceEEEcC------CCcEEEeeEEEEecCcCCc-hhHhhcc
Confidence 9999999998887654 33344432 7889999999999999997 5665544
Q ss_pred CccCCCCCCCCCceEeCCC-cccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecC
Q 010827 383 NRLHDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 461 (500)
Q Consensus 383 ~~~~~~~~~~~g~i~vd~~-~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~ 461 (500)
+ .+++|+|.||+. +|++++|||||+|||+.. .+.++++..|..||+.+|+||.+.+.++++.|+.|..
T Consensus 267 -----l-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~-----~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~ 335 (401)
T 3vrd_B 267 -----L-TNDSGWCPVDIRTFESSLQPGIHVIGDACNA-----APMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLN 335 (401)
T ss_dssp -----C-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCC-----TTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEE
T ss_pred -----c-cccCCCEEECCCcceecCCCCEEEecccccC-----CCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC
Confidence 4 578899999975 887699999999999863 2457899999999999999999999999888888876
Q ss_pred ceeE
Q 010827 462 LGEM 465 (500)
Q Consensus 462 ~~~~ 465 (500)
+..+
T Consensus 336 ~~~~ 339 (401)
T 3vrd_B 336 TCYS 339 (401)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6543
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=7.7e-39 Score=342.48 Aligned_cols=328 Identities=20% Similarity=0.295 Sum_probs=247.5
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-chh
Q 010827 49 ASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLY 127 (500)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-~~~ 127 (500)
.-++||..|++.+. ....+.+++++|+|||||+|||+||..|++.. +|++|+|||+++.++|.+ .++
T Consensus 14 ~~~~np~~g~e~~~--------~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~----~g~~V~vie~~~~~~~~~~~lp 81 (588)
T 3ics_A 14 SMTGGQQMGRTLYD--------DDDKDRWGSRKIVVVGGVAGGASVAARLRRLS----EEDEIIMVERGEYISFANCGLP 81 (588)
T ss_dssp ----------------------------CCCCEEEEECCSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGGHH
T ss_pred ccccchhcCccccC--------cccCCcccCCCEEEECCcHHHHHHHHHHHhhC----cCCCEEEEECCCCccccCCCCc
Confidence 45789999999765 11133456689999999999999999999952 589999999999887755 355
Q ss_pred hhccccccCc--cccccHHHHhccCCcEEEE-eeEEEEecCCCCCCCCCceeecCcEEEc-CCcc--EEEecEEEEeCCC
Q 010827 128 ELLSGEVDAW--EIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGL--IVEYDWLVLSLGA 201 (500)
Q Consensus 128 ~~~~g~~~~~--~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~-~~g~--~~~~d~lIlAtG~ 201 (500)
..+.+..... .+...+..+.++.+++++. .+|+.++...+. ..+.. .++. .+.||+||+|||+
T Consensus 82 ~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~-----------v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 82 YYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKT-----------ITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTTE-----------EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhhcCcCCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCE-----------EEEeecCCCCEEEEeCCEEEECCCC
Confidence 5555544322 2445667777788999876 589999887652 12221 2444 7899999999999
Q ss_pred CCCCCCCCCc-c-ccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 202 EPKLDVVPGA-A-EFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 202 ~p~~~~i~G~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
+|..|++||. + ..++...+..+...+...+... . +++|+|||+|.+|+|+|..|++.+.+ |+++++.
T Consensus 151 ~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~---~-----~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~ 219 (588)
T 3ics_A 151 KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEK---K-----PRHATVIGGGFIGVEMVENLRERGIE---VTLVEMA 219 (588)
T ss_dssp EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHH---C-----CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhc---C-----CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 9999999997 3 3455566777766665554321 1 68999999999999999999998776 9999999
Q ss_pred CccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccE
Q 010827 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359 (500)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~ 359 (500)
+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +.+.+. ++++
T Consensus 220 ~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-----------------------~~v~~~--------~g~~ 268 (588)
T 3ics_A 220 NQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENG-----------------------AVVRLK--------SGSV 268 (588)
T ss_dssp SSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-----------------------TEEEET--------TSCE
T ss_pred CcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-----------------------CEEEEC--------CCCE
Confidence 999999999999999999999999999999999998754 445553 6678
Q ss_pred EeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHHH
Q 010827 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQ 437 (500)
Q Consensus 360 l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~~ 437 (500)
+++|.||+|+|++|+.++++.. +++++++|+|.||+++|| +.|+|||+|||+..++. .|.+ .+.++..|..|
T Consensus 269 i~~D~Vi~a~G~~p~~~~l~~~-----g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 342 (588)
T 3ics_A 269 IQTDMLILAIGVQPESSLAKGA-----GLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQ 342 (588)
T ss_dssp EECSEEEECSCEEECCHHHHHT-----TCCBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHH
T ss_pred EEcCEEEEccCCCCChHHHHhc-----CceEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHH
Confidence 9999999999999998876544 478888999999999999 99999999999976543 2332 36788999999
Q ss_pred HHHHHHHHHH
Q 010827 438 ADFAGWNLWA 447 (500)
Q Consensus 438 g~~aa~~i~~ 447 (500)
|+.+|.+|.+
T Consensus 343 g~~aa~~i~g 352 (588)
T 3ics_A 343 GRMLADIIHG 352 (588)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999999986
No 15
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=6.2e-39 Score=330.03 Aligned_cols=323 Identities=23% Similarity=0.294 Sum_probs=250.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCCCcccC--cchhhhccccccCccccccHHHHhccCCcEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQF 154 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 154 (500)
.++|+|||||+||+++|..|++ .|+ +|+|||+++.++|. +....++.+......+...+.+++++.++++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~------~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 77 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA------SGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQL 77 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEE
T ss_pred CCcEEEEcCHHHHHHHHHHHHc------cCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEE
Confidence 4899999999999999999999 455 89999999876653 2233344444444444444556777789999
Q ss_pred EEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcc-cc---ccCCCChHHHHHHHH
Q 010827 155 FKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EF---AFPFSTLEDACRVDR 229 (500)
Q Consensus 155 ~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~---~~~~~~~~~~~~~~~ 229 (500)
+.+ .|+.++...+ .+.++++..+.||+||+|||++|..|++||.+ .. ++.+.+.+++..+..
T Consensus 78 ~~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~ 144 (431)
T 1q1r_A 78 LGGTQVTAINRDRQ-------------QVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRR 144 (431)
T ss_dssp ECSCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHH
T ss_pred EeCCEEEEEECCCC-------------EEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHH
Confidence 886 7899987654 57777888999999999999999999999974 23 555677887776655
Q ss_pred HHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcC
Q 010827 230 KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 230 ~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
.+. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||+++++
T Consensus 145 ~l~----------~~~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~ 211 (431)
T 1q1r_A 145 QLI----------ADNRLVVIGGGYIGLEVAATAIKANMH---VTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTG 211 (431)
T ss_dssp TCC----------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred Hhh----------cCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeC
Confidence 321 168999999999999999999988876 9999999888875 78888899999999999999999
Q ss_pred ceEEEEec--CccccccccCCCCCcccccccccCCcce-eEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCcc
Q 010827 309 YFVRCIRR--VGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRL 385 (500)
Q Consensus 309 ~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~ 385 (500)
+.|++++. ++ +.+ .+.+. +++++++|.||+|+|++|+.++++..+
T Consensus 212 ~~v~~i~~~~~~-----------------------~~v~~v~~~------~G~~i~~D~Vv~a~G~~p~~~l~~~~g--- 259 (431)
T 1q1r_A 212 TQVCGFEMSTDQ-----------------------QKVTAVLCE------DGTRLPADLVIAGIGLIPNCELASAAG--- 259 (431)
T ss_dssp CCEEEEEECTTT-----------------------CCEEEEEET------TSCEEECSEEEECCCEEECCHHHHHTT---
T ss_pred CEEEEEEeccCC-----------------------CcEEEEEeC------CCCEEEcCEEEECCCCCcCcchhhccC---
Confidence 99999986 33 233 33332 567899999999999999988776544
Q ss_pred CCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCC-CCC-CCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecC-c
Q 010827 386 HDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSS-GRP-LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN-L 462 (500)
Q Consensus 386 ~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~-~~~-~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~-~ 462 (500)
++++ +| |.||+++|| +.|+|||+|||+..+.+. |.+ ....+..|..||+.+|.+|.+.....+..|+.|.. +
T Consensus 260 --l~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~ 334 (431)
T 1q1r_A 260 --LQVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQY 334 (431)
T ss_dssp --CCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEET
T ss_pred --CCCC-CC-EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCCCCCCCCeEEEEEC
Confidence 5554 45 999999999 999999999999874321 211 12367899999999999998755455667777765 2
Q ss_pred e-eEEEecC
Q 010827 463 G-EMMILGR 470 (500)
Q Consensus 463 ~-~~~~~G~ 470 (500)
+ .+..+|.
T Consensus 335 ~~~~~~~G~ 343 (431)
T 1q1r_A 335 EIGLKMVGL 343 (431)
T ss_dssp TEEEEEEEC
T ss_pred CceEEEEeC
Confidence 2 4566663
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=3e-38 Score=329.53 Aligned_cols=327 Identities=19% Similarity=0.255 Sum_probs=238.6
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hh
Q 010827 49 ASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LY 127 (500)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~ 127 (500)
..++||..|++.... ...+...++||+|||||+||++||..|++.. +|++|+|||+++.+.+.+. ++
T Consensus 14 ~~~~np~~g~~~~~~--------~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~ 81 (480)
T 3cgb_A 14 SMTGGQQMGRTLYDD--------DDKDRWGSMNYVIIGGDAAGMSAAMQIVRND----ENANVVTLEKGEIYSYAQCGLP 81 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEECSSSCCSBCGGGHH
T ss_pred cccchhhhcccccCC--------CCcCccccceEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCCCCCCcc
Confidence 468899999986331 0011122479999999999999999999842 5899999999987765442 33
Q ss_pred hhccccc-cCccccccHHHHh-ccCCcEEEE-eeEEEEecCCCCCCCCCceeecCcEEEc---CCcc--EEEecEEEEeC
Q 010827 128 ELLSGEV-DAWEIAPRFADLL-ANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVLSL 199 (500)
Q Consensus 128 ~~~~g~~-~~~~~~~~~~~~~-~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~--~~~~d~lIlAt 199 (500)
.++.+.. ....+.....+.+ +..+++++. .++..++...+ .+.+ .++. .+.||+||+||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lviAt 148 (480)
T 3cgb_A 82 YVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKK-------------IVYAEHTKTKDVFEFSYDRLLIAT 148 (480)
T ss_dssp HHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECC
T ss_pred hhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCC-------------EEEEEEcCCCceEEEEcCEEEECC
Confidence 3333332 2334443334444 556899987 48889987655 2333 2355 79999999999
Q ss_pred CCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEec
Q 010827 200 GAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINV 278 (500)
Q Consensus 200 G~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~ 278 (500)
|++|..|++||.+ +.++...+.+++..+.+.+.. ..+++|+|||+|.+|+|+|..|++.+.+ |+++++
T Consensus 149 G~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~--------~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~ 217 (480)
T 3cgb_A 149 GVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET--------NKVEDVTIIGGGAIGLEMAETFVELGKK---VRMIER 217 (480)
T ss_dssp CEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS--------SCCCEEEEECCHHHHHHHHHHHHHTTCE---EEEECC
T ss_pred CCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh--------cCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEe
Confidence 9999999999975 456667778888777665421 1178999999999999999999988776 999999
Q ss_pred CCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCcc
Q 010827 279 ETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ 358 (500)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~ 358 (500)
.+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +...+.+ ++.
T Consensus 218 ~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~v~~v~~-------~~~ 267 (480)
T 3cgb_A 218 NDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNE-----------------------RVEAVET-------DKG 267 (480)
T ss_dssp GGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-----------------------BEEEEEE-------TTE
T ss_pred CCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC-----------------------cEEEEEE-------CCC
Confidence 9999988899999999999999999999999999998642 2112332 345
Q ss_pred EEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHH
Q 010827 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQ 436 (500)
Q Consensus 359 ~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~ 436 (500)
++++|.||+|+|++|+.++++..+ ++++++|+|.||+++|| +.|+|||+|||+..+.. .|++ .+.++..|..
T Consensus 268 ~i~~D~vi~a~G~~p~~~~l~~~g-----~~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 341 (480)
T 3cgb_A 268 TYKADLVLVSVGVKPNTDFLEGTN-----IRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANK 341 (480)
T ss_dssp EEECSEEEECSCEEESCGGGTTSC-----CCBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHH
T ss_pred EEEcCEEEECcCCCcChHHHHhCC-----cccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHH
Confidence 799999999999999988876654 77888999999999999 89999999999976442 1322 2467899999
Q ss_pred HHHHHHHHHHH
Q 010827 437 QADFAGWNLWA 447 (500)
Q Consensus 437 ~g~~aa~~i~~ 447 (500)
||+.+|.+|.+
T Consensus 342 qg~~aa~~i~g 352 (480)
T 3cgb_A 342 QGRLAGLNMLD 352 (480)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999975
No 17
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=5.6e-38 Score=334.52 Aligned_cols=325 Identities=21% Similarity=0.308 Sum_probs=244.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-chhhhcccccc-Cc-cccccHHHHhccCCcEEEE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVD-AW-EIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-~~~~~~~g~~~-~~-~~~~~~~~~~~~~~v~~~~ 156 (500)
++|+|||||+|||+||..|++.+ .+++|+|||+++.+++.+ .++.++.+... .. .+......+.++.+++++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 77 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS----ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRV 77 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEET
T ss_pred CcEEEECCCHHHHHHHHHHHhhC----cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEE
Confidence 68999999999999999999952 589999999999887754 34444455432 22 2334455555557899875
Q ss_pred -eeEEEEecCCCCCCCCCceeecCcEEEcC---Cc--cEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHH
Q 010827 157 -DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDR 229 (500)
Q Consensus 157 -~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g--~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~ 229 (500)
.+|+.++...+ .+.+. ++ ..+.||+||||||++|..|++||.+ ..++...+..+...+..
T Consensus 78 ~~~V~~id~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~ 144 (565)
T 3ntd_A 78 KHEVVAIDRAAK-------------LVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQ 144 (565)
T ss_dssp TEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHH
T ss_pred CCEEEEEECCCC-------------EEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHH
Confidence 58999988766 23332 23 3789999999999999999999984 45566677777666654
Q ss_pred HHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCc
Q 010827 230 KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 230 ~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
.+.. .. +++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++.+++.+.+.+.+.+++.||++++++
T Consensus 145 ~~~~---~~-----~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~ 213 (565)
T 3ntd_A 145 TIQM---NN-----VEHATVVGGGFIGLEMMESLHHLGIK---TTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGT 213 (565)
T ss_dssp HHHH---TT-----CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETC
T ss_pred HHhh---CC-----CCEEEEECCCHHHHHHHHHHHhcCCc---EEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 4322 11 68999999999999999999988776 9999999999998999999999999999999999999
Q ss_pred eEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCC
Q 010827 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (500)
Q Consensus 310 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~ 389 (500)
.+++++.+.... ....... .........+.+.+.+. +++++++|.||+|+|++|+.++++.. +++
T Consensus 214 ~v~~i~~~~~~~---~~~~~~~-~~~~~~~~~~~~~v~~~------~g~~i~~D~vi~a~G~~p~~~l~~~~-----g~~ 278 (565)
T 3ntd_A 214 ALSEVSYQVQTH---VASDAAG-EDTAHQHIKGHLSLTLS------NGELLETDLLIMAIGVRPETQLARDA-----GLA 278 (565)
T ss_dssp CEEEEEEECCCC---CCCGGGT-CCCTTCCTTCEEEEEET------TSCEEEESEEEECSCEEECCHHHHHH-----TCC
T ss_pred eEEEEecccccc---ccccccc-cccccccCCCcEEEEEc------CCCEEEcCEEEECcCCccchHHHHhC-----Ccc
Confidence 999997631000 0000000 00000001245555542 56789999999999999998876543 478
Q ss_pred CCCCCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHHHHHHHHHHHHHH
Q 010827 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 390 ~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
++++|+|.||+++|| +.|+|||+|||+..++. .|.+ .++++..|..||+.+|++|.+.
T Consensus 279 ~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 279 IGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp BCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCEEECCCccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 889999999999999 99999999999976543 2332 4578999999999999999864
No 18
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.3e-38 Score=329.97 Aligned_cols=307 Identities=24% Similarity=0.336 Sum_probs=225.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-chhhhcccccc-Cccc-------cccHHHHhcc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVD-AWEI-------APRFADLLAN 149 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-~~~~~~~g~~~-~~~~-------~~~~~~~~~~ 149 (500)
+++|+|||||+|||+||..|++. .+|++|+|||+++.++|.+ .++.++.+... ...+ ......+.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRIN 78 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhh
Confidence 47999999999999999999994 2589999999999887754 34444444432 2222 2223333345
Q ss_pred CCcEEEE-eeEEEEecCCCCCCCCCceeecCcEEEcCC---cc--EEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChH
Q 010827 150 TGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLES---GL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLE 222 (500)
Q Consensus 150 ~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~---g~--~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~ 222 (500)
.+++++. .+|+.++...+ .+.+.+ +. .+.||+||+|||++|..|++||.+ ..++.+.+..
T Consensus 79 ~gi~~~~~~~V~~id~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~ 145 (472)
T 3iwa_A 79 KDVEALVETRAHAIDRAAH-------------TVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLD 145 (472)
T ss_dssp --CEEECSEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHH
T ss_pred cCcEEEECCEEEEEECCCC-------------EEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHH
Confidence 7888866 58999988765 343332 44 789999999999999999999974 4455567777
Q ss_pred HHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHH-HhhcCeEEEEecCCccCC-CCCcchHHHHHHHHHh
Q 010827 223 DACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTICP-TGTPGNREAALKVLSA 300 (500)
Q Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~-~~~~~~vtlv~~~~~~~~-~~~~~~~~~~~~~l~~ 300 (500)
+...+...+.. ..+++++|||+|.+|+|+|..+++. +.+ |+++++.+.+++ .+++.+.+.+.+.+++
T Consensus 146 ~~~~l~~~l~~--------~~~~~vvViGgG~~g~e~A~~l~~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 214 (472)
T 3iwa_A 146 EAEFVQHAISA--------GEVSKAVIVGGGFIGLEMAVSLADMWGID---TTVVELADQIMPGFTSKSLSQMLRHDLEK 214 (472)
T ss_dssp HHHHHHHHCCT--------TSCSEEEEECCSHHHHHHHHHHHHHHCCE---EEEECSSSSSSTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhc--------CCCCEEEEECCCHHHHHHHHHHHHhcCCc---EEEEEccCcccccccCHHHHHHHHHHHHh
Confidence 77666543211 1268999999999999999999988 766 999999999998 8899999999999999
Q ss_pred CCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCC
Q 010827 301 RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEP 380 (500)
Q Consensus 301 ~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~ 380 (500)
.||++++++.|++++.++ +.+.+.+. +++++++|.||+|+|++|+.++++.
T Consensus 215 ~GV~i~~~~~v~~i~~~~-----------------------~~v~v~~~------~g~~i~aD~Vv~a~G~~p~~~l~~~ 265 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGEN-----------------------GKVARVIT------DKRTLDADLVILAAGVSPNTQLARD 265 (472)
T ss_dssp TTCEEECSCCEEEEEESS-----------------------SBEEEEEE------SSCEEECSEEEECSCEEECCHHHHH
T ss_pred cCCEEEeCCEEEEEEccC-----------------------CeEEEEEe------CCCEEEcCEEEECCCCCcCHHHHHh
Confidence 999999999999998754 45555543 5678999999999999999877654
Q ss_pred CCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHHHHHHHHHHHHHH
Q 010827 381 PNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 381 ~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
. +++++++|+|.||+++|| +.|+||++|||+..++. .|.+ ++.++..|..||+.+|++|.+.
T Consensus 266 ~-----gl~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 329 (472)
T 3iwa_A 266 A-----GLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADG 329 (472)
T ss_dssp H-----TCCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTC
T ss_pred C-----CccCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 3 478889999999999999 99999999999976543 2332 3568889999999999999853
No 19
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=6.2e-38 Score=324.85 Aligned_cols=304 Identities=19% Similarity=0.214 Sum_probs=229.4
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hhhhccccc-cCccccccHHHHhccCCcEEEE-
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV-DAWEIAPRFADLLANTGVQFFK- 156 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~- 156 (500)
+||+|||||+||++||..|++.. +|++|+|||+++.+++.+. +..++.+.. ....+.....+++.+.+++++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~----~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY----PQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC----SSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 69999999999999999999942 5899999999998877553 333343432 3344455456677788999876
Q ss_pred eeEEEEecCCCCCCCCCceeecCcEEE-cCCccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHHH
Q 010827 157 DRVKLLCPSDHLGVNGPMACTHGGTVL-LESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (500)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~-~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~~ 234 (500)
.+|+.++...+. ..+. ..++..+.||+||+|||++|..|++||.+ ..++...+..+...+......
T Consensus 79 ~~V~~id~~~~~-----------v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~- 146 (452)
T 3oc4_A 79 REVVAMDVENQL-----------IAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLEN- 146 (452)
T ss_dssp CEEEEEETTTTE-----------EEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHT-
T ss_pred CEEEEEECCCCE-----------EEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhc-
Confidence 489999887652 1221 23556899999999999999999999975 333333333333333222211
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
+++++|||+|.+|+|+|..+++.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|++
T Consensus 147 ---------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 214 (452)
T 3oc4_A 147 ---------SQTVAVIGAGPIGMEAIDFLVKMKKT---VHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLG 214 (452)
T ss_dssp ---------CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEE
T ss_pred ---------CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 68999999999999999999988876 9999999999886 8999999999999999999999999999
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
++.++ +++.+.+. ++ ++++|.||+|+|++|+.++++. .++++++
T Consensus 215 i~~~~-----------------------~~v~v~~~------~g-~i~aD~Vv~A~G~~p~~~~l~~------~~~~~~~ 258 (452)
T 3oc4_A 215 IEETA-----------------------NGIVLETS------EQ-EISCDSGIFALNLHPQLAYLDK------KIQRNLD 258 (452)
T ss_dssp EEECS-----------------------SCEEEEES------SC-EEEESEEEECSCCBCCCSSCCT------TSCBCTT
T ss_pred EEccC-----------------------CeEEEEEC------CC-EEEeCEEEECcCCCCChHHHHh------hhccCCC
Confidence 98544 45555532 34 8999999999999999988753 2678889
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHHH
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
|+|.||+++|| +.|+|||+|||+..++. .++ .++.++..|..||+.+|.+|.+.
T Consensus 259 g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 314 (452)
T 3oc4_A 259 QTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK 314 (452)
T ss_dssp SCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSC
T ss_pred CCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 99999999999 99999999999986332 111 12468899999999999999753
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.2e-38 Score=325.20 Aligned_cols=305 Identities=20% Similarity=0.268 Sum_probs=232.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-chhhhccccccCccccccHHHHh-ccCCcEEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVDAWEIAPRFADLL-ANTGVQFFK 156 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~ 156 (500)
+++|+|||||+||+++|..|++.+ ++++|+|||+++.+.+.+ .++.++.+......+.....+.+ ++.+++++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~----~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ 78 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK----PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHL 78 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSSSCCC------------------------CTHHHHTTCEEET
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC----cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEe
Confidence 479999999999999999999952 589999999999876655 34444444433344333333333 567899998
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcCCc-cEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSE 233 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~ 233 (500)
+ +|+.++.... .+.++++ ..+.||+||+|||++|..|++||.+ +.++...+..+...+...+..
T Consensus 79 ~~~v~~i~~~~~-------------~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~ 145 (449)
T 3kd9_A 79 NAEVIEVDTGYV-------------RVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK 145 (449)
T ss_dssp TCEEEEECSSEE-------------EEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS
T ss_pred cCEEEEEecCCC-------------EEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh
Confidence 7 8999976643 5666666 4899999999999999999999975 445556677777766654321
Q ss_pred HHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-CCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 234 ~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++. +++.+.+.+.+.+++. |++++++.+.
T Consensus 146 --------~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~ 213 (449)
T 3kd9_A 146 --------YKVENVVIIGGGYIGIEMAEAFAAQGKN---VTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITM 213 (449)
T ss_dssp --------SCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEE
T ss_pred --------cCCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEE
Confidence 1267999999999999999999998776 9999999999987 8999999999999999 9999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~ 392 (500)
+++.++ .+..... ++.++++|.||+|+|++|+.++++.. ++++++
T Consensus 214 ~i~~~~------------------------~v~~v~~------~g~~i~~D~Vv~a~G~~p~~~l~~~~-----gl~~~~ 258 (449)
T 3kd9_A 214 KIEGEE------------------------RVEKVVT------DAGEYKAELVILATGIKPNIELAKQL-----GVRIGE 258 (449)
T ss_dssp EEECSS------------------------SCCEEEE------TTEEEECSEEEECSCEEECCHHHHHT-----TCCBCT
T ss_pred EEeccC------------------------cEEEEEe------CCCEEECCEEEEeeCCccCHHHHHhC-----CccCCC
Confidence 998743 1211111 56789999999999999998876544 488889
Q ss_pred CCceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHHH
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
+|+|.||+++|| +.|+|||+|||+..++. .|. ..+.++..|..||+.+|.+|.+.
T Consensus 259 ~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 259 TGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGK 315 (449)
T ss_dssp TSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCC
Confidence 999999999999 99999999999976543 233 23678999999999999999753
No 21
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2.5e-37 Score=323.34 Aligned_cols=305 Identities=21% Similarity=0.261 Sum_probs=236.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hhhhcccc-ccCccccccHHHHhccCCcEEE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGE-VDAWEIAPRFADLLANTGVQFF 155 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~v~~~ 155 (500)
+.+||+|||||+||+++|..|++.+. ++++|+|||+++.+.+.+. +..++.+. ..+..+.....+.+++.+++++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~---~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 110 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYG---DANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVY 110 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHG---GGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCC---CCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEE
Confidence 35899999999999999999999420 2389999999987665442 33233333 2344445555667777899987
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEEcC-C--ccEEEecEEEEeCCCCCCCCCCCCcc------------ccccCCC
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GLIVEYDWLVLSLGAEPKLDVVPGAA------------EFAFPFS 219 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~--g~~~~~d~lIlAtG~~p~~~~i~G~~------------~~~~~~~ 219 (500)
.+ ++..++...+ .+.+. + +..+.||+||+|||++|..|++||.+ +.++...
T Consensus 111 ~~~~v~~i~~~~~-------------~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~ 177 (490)
T 2bc0_A 111 MESPVQSIDYDAK-------------TVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVK 177 (490)
T ss_dssp TTCCEEEEETTTT-------------EEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECS
T ss_pred eCCEEEEEECCCC-------------EEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeC
Confidence 65 6899987655 34443 3 45799999999999999999999875 2345556
Q ss_pred ChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC-CCCcchHHHHHHHH
Q 010827 220 TLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVL 298 (500)
Q Consensus 220 ~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~-~~~~~~~~~~~~~l 298 (500)
+..+...+.+.+. ...+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++ .+++++.+.+.+.|
T Consensus 178 ~~~~~~~~~~~~~--------~~~~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l 246 (490)
T 2bc0_A 178 LYQNSADVIAKLE--------NKDIKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCLAGYYDRDLTDLMAKNM 246 (490)
T ss_dssp SHHHHHHHHHHTT--------STTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhh--------hcCCceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchhhhHHHHHHHHHHHHHH
Confidence 6666666554420 01278999999999999999999988776 999999999888 68899999999999
Q ss_pred HhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcce-eEeecccccCCCccEEeecEEEEecCCCCCCCC
Q 010827 299 SARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (500)
Q Consensus 299 ~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~ 377 (500)
++.||++++++.|++++.+ +.+ .+.+ +++++++|.||+|+|++|+.++
T Consensus 247 ~~~GV~i~~~~~v~~i~~~------------------------~~v~~v~~-------~g~~i~~D~Vi~a~G~~p~~~l 295 (490)
T 2bc0_A 247 EEHGIQLAFGETVKEVAGN------------------------GKVEKIIT-------DKNEYDVDMVILAVGFRPNTTL 295 (490)
T ss_dssp HTTTCEEEETCCEEEEECS------------------------SSCCEEEE-------SSCEEECSEEEECCCEEECCGG
T ss_pred HhCCeEEEeCCEEEEEEcC------------------------CcEEEEEE-------CCcEEECCEEEECCCCCcChHH
Confidence 9999999999999999863 222 2332 4568999999999999999887
Q ss_pred CCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHH
Q 010827 378 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 378 ~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
++.. ++++++|+|.||+++|| +.|+|||+|||+..++. .++ ..+.++..|..||+.+|.+|.+
T Consensus 296 l~~~------l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 296 GNGK------IDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp GTTC------SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred HHhh------hccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 6542 56778899999999999 99999999999986432 122 1256889999999999999975
No 22
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.8e-37 Score=321.38 Aligned_cols=301 Identities=21% Similarity=0.300 Sum_probs=238.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hhhhccccc---cCccccccHHHHhccCCcEEE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV---DAWEIAPRFADLLANTGVQFF 155 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~~~~~g~~---~~~~~~~~~~~~~~~~~v~~~ 155 (500)
+||+|||||+||+++|..|++.. +|++|+|||+++.+++.+. +..++.+.. .+..+...+.+++++.+++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADH----PDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEE
Confidence 58999999999999999999842 4899999999987666443 333344443 344555556677778899997
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEEcCC-----ccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHH
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD 228 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-----g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~ 228 (500)
.+ ++..++...+ .+.+.+ +..+.||+||+|||++|..|++||.+ +.++...+..+...+.
T Consensus 77 ~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~ 143 (452)
T 2cdu_A 77 MRHQVTNVDPETK-------------TIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLF 143 (452)
T ss_dssp ESEEEEEEEGGGT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHH
T ss_pred eCCEEEEEEcCCC-------------EEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHH
Confidence 76 6888886554 344322 46799999999999999999999975 3455566777766665
Q ss_pred HHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC-CCCcchHHHHHHHHHhCCcEEEc
Q 010827 229 RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVL 307 (500)
Q Consensus 229 ~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~-~~~~~~~~~~~~~l~~~gV~i~~ 307 (500)
..+.. +++++|||+|.+|+|+|..|++.+.+ |+++++.+.+++ .+++.+.+.+.+.+++.||++++
T Consensus 144 ~~~~~----------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~ 210 (452)
T 2cdu_A 144 EEAPK----------AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVL 210 (452)
T ss_dssp HHGGG----------CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhcc----------CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEc
Confidence 54321 78999999999999999999887776 999999999888 68899999999999999999999
Q ss_pred CceEEEEecCccccccccCCCCCcccccccccCCccee-EeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccC
Q 010827 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (500)
Q Consensus 308 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~ 386 (500)
++.|++++.++ +++. +.+ +++++++|.||+|+|++|+.++++. .
T Consensus 211 ~~~v~~i~~~~-----------------------~~v~~v~~-------~g~~i~~D~vv~a~G~~p~~~ll~~-----~ 255 (452)
T 2cdu_A 211 GSKVAAFEEVD-----------------------DEIITKTL-------DGKEIKSDIAILCIGFRPNTELLKG-----K 255 (452)
T ss_dssp SSCEEEEEEET-----------------------TEEEEEET-------TSCEEEESEEEECCCEEECCGGGTT-----T
T ss_pred CCeeEEEEcCC-----------------------CeEEEEEe-------CCCEEECCEEEECcCCCCCHHHHHH-----h
Confidence 99999998633 3443 331 4578999999999999999887653 1
Q ss_pred CCCCCCCCceEeCCCcccCCCCCEEEecccccccCC-CCC-CCCchHHHHHHHHHHHHHHHHH
Q 010827 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 387 ~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~-~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
++++++|+|.||+++|| +.|+|||+|||+..++. .++ ..+.++..|..||+.+|.+|.+
T Consensus 256 -l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 256 -VAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp -SCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred -hhcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 56778899999999999 99999999999986432 122 1256899999999999999975
No 23
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=3.2e-37 Score=312.87 Aligned_cols=297 Identities=24% Similarity=0.336 Sum_probs=231.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc-CcchhhhccccccCccccc-cHHHHhccCCcEEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAP-RFADLLANTGVQFFK 156 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~v~~~~ 156 (500)
++||+|||||+||++||..|++.+ ..++|+|+|+++...+ .+.+...+.+......+.. .+..++++.+++++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g----~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLD----GETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTC----SSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhC----CCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEe
Confidence 489999999999999999999942 2468999999874433 4444444433333333433 456666778999987
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~l~~~ 234 (500)
+ ++..++...+ .+.+++ ..+.||+||+|||++|..|++||.+ +.++...+..+...+...+..
T Consensus 80 ~~~v~~i~~~~~-------------~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~- 144 (384)
T 2v3a_A 80 HTRVTGIDPGHQ-------------RIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAG- 144 (384)
T ss_dssp SCCCCEEEGGGT-------------EEEETT-EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTT-
T ss_pred CCEEEEEECCCC-------------EEEECC-cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhcc-
Confidence 5 7888876543 566654 4799999999999999999999975 455666677766655544321
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCC-CcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG-TPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~-~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
+++++|||+|.+|+|+|..|++.+.+ |+++++.+.+++.. ++.+.+.+.+.+++.||++++++.|++
T Consensus 145 ---------~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 212 (384)
T 2v3a_A 145 ---------KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLAS 212 (384)
T ss_dssp ---------CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEE
T ss_pred ---------CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 68999999999999999999988776 99999999888874 778889999999999999999999999
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
++.++ +.+.+.+. +++++++|.||+|+|.+|+.++++.. +++++ +
T Consensus 213 i~~~~-----------------------~~~~v~~~------~g~~i~~d~vv~a~G~~p~~~l~~~~-----g~~~~-~ 257 (384)
T 2v3a_A 213 LKKAG-----------------------EGLEAHLS------DGEVIPCDLVVSAVGLRPRTELAFAA-----GLAVN-R 257 (384)
T ss_dssp EEEET-----------------------TEEEEEET------TSCEEEESEEEECSCEEECCHHHHHT-----TCCBS-S
T ss_pred EEecC-----------------------CEEEEEEC------CCCEEECCEEEECcCCCcCHHHHHHC-----CCCCC-C
Confidence 98644 44555543 56789999999999999998776544 36666 5
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
| |.||+++|| +.|+|||+|||+.... .....+..|..||+.+|.+|.+
T Consensus 258 g-i~vd~~~~t-~~~~IyA~GD~~~~~~----~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 258 G-IVVDRSLRT-SHANIYALGDCAEVDG----LNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp S-EEECTTCBC-SSTTEEECGGGEEETT----BCCCSHHHHHHHHHHHHHHHTT
T ss_pred C-EEECCCCCC-CCCCEEEeeeeeeECC----CCcchHHHHHHHHHHHHHHhcC
Confidence 7 999999998 9999999999997521 1123577899999999999975
No 24
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.1e-37 Score=323.85 Aligned_cols=324 Identities=19% Similarity=0.254 Sum_probs=238.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-cc-hhhhccccc--------------------
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PM-LYELLSGEV-------------------- 134 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-~~-~~~~~~g~~-------------------- 134 (500)
+..++|||||||+||++||..|++.. .+++|+|||++++++|. +. ...++.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~----~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARD----PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIY 84 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHS----TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESB
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcC----CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccccccc
Confidence 34589999999999999999998842 58999999999877653 21 121211110
Q ss_pred -cCccccccHHHHh--ccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCC
Q 010827 135 -DAWEIAPRFADLL--ANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPG 210 (500)
Q Consensus 135 -~~~~~~~~~~~~~--~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G 210 (500)
...........+. .+.+++++.+ +|+.++...+ ++.++++..+.||+||||||++|+.|++++
T Consensus 85 ~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~-------------~V~~~~g~~i~yd~lviATGs~p~~~~~~~ 151 (493)
T 1m6i_A 85 FQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDN-------------MVKLNDGSQITYEKCLIATGGTPRSLSAID 151 (493)
T ss_dssp SSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGT-------------EEEETTSCEEEEEEEEECCCEEECCCHHHH
T ss_pred ccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCCcc
Confidence 0000000001111 2457899987 8999987655 688888889999999999999998777655
Q ss_pred c-----cccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcC-eEEEEecCCccCC
Q 010827 211 A-----AEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG-IVQAINVETTICP 284 (500)
Q Consensus 211 ~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~-~vtlv~~~~~~~~ 284 (500)
. .+.++.+++.+++..+...+.. +++|+|||+|.+|+|+|..|++.+.+.+ .|+++++.+.++.
T Consensus 152 ~~~~~~~~~v~~~~~~~d~~~l~~~~~~----------~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~ 221 (493)
T 1m6i_A 152 RAGAEVKSRTTLFRKIGDFRSLEKISRE----------VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG 221 (493)
T ss_dssp TSCHHHHHTEEECCSHHHHHHHHHHHHH----------CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT
T ss_pred cccccccCceEEEcCHHHHHHHHHHhhc----------CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc
Confidence 2 1344556788887777665432 6899999999999999999988765422 3999988766554
Q ss_pred -CCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeec
Q 010827 285 -TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 363 (500)
Q Consensus 285 -~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D 363 (500)
.+++.+.+.+.+.+++.||++++++.|++++.++ +.+.+.+. +++++++|
T Consensus 222 ~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-----------------------~~~~v~l~------dG~~i~aD 272 (493)
T 1m6i_A 222 KILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-----------------------GKLLIKLK------DGRKVETD 272 (493)
T ss_dssp TTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEES
T ss_pred ccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-----------------------CeEEEEEC------CCCEEECC
Confidence 3577888899999999999999999999998643 44455543 66789999
Q ss_pred EEEEecCCCCCCCCCCCCCCccCCCCCCC-CCceEeCCCcccCCCCCEEEecccccccCCC-CCCCCchHHHHHHHHHHH
Q 010827 364 LVLWTVGSKPLLPHVEPPNNRLHDLPLNA-RGQAETDETLCVKGHPRIFALGDSSALRDSS-GRPLPATAQVAFQQADFA 441 (500)
Q Consensus 364 ~vi~a~G~~p~~~~~~~~~~~~~~~~~~~-~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~-~~~~~~~~~~A~~~g~~a 441 (500)
.||+|+|.+|+.++++.+ ++++++ +|+|.||+++|+ .|+|||+|||+..+++. |......+..|+.||+.+
T Consensus 273 ~Vv~a~G~~pn~~l~~~~-----gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~a 345 (493)
T 1m6i_A 273 HIVAAVGLEPNVELAKTG-----GLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLA 345 (493)
T ss_dssp EEEECCCEEECCTTHHHH-----TCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHH
T ss_pred EEEECCCCCccHHHHHHc-----CCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHH
Confidence 999999999998887654 366765 689999999998 49999999999864431 222345678999999999
Q ss_pred HHHHHHHHCCCCCCCceecCce
Q 010827 442 GWNLWAAINDRPLLPFRFQNLG 463 (500)
Q Consensus 442 a~~i~~~l~~~~~~p~~~~~~~ 463 (500)
|.+|.+........||.|...+
T Consensus 346 a~ni~g~~~~~~~~~~~~s~~~ 367 (493)
T 1m6i_A 346 GENMTGAAKPYWHQSMFWSDLG 367 (493)
T ss_dssp HHHHTSCCCCCCCCCEEEEESS
T ss_pred HHHhcCCCCCcCCcCceeeeec
Confidence 9999865444456667666543
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=3.1e-37 Score=304.68 Aligned_cols=306 Identities=19% Similarity=0.157 Sum_probs=221.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC--CCcccCcchhhhcc-ccccCccccccHHHHhccCCcE
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS--ERFVFKPMLYELLS-GEVDAWEIAPRFADLLANTGVQ 153 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~--~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ 153 (500)
.+++||+|||||+|||++|..|++ .|++|+|||++ ..+.+.+....+.. .......+...+.+.+++.+++
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSAR------YMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVP 86 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCC
T ss_pred CCccCEEEECccHHHHHHHHHHHH------CCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 345899999999999999999999 68999999997 11111111111111 0122234555667777788999
Q ss_pred EEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHH
Q 010827 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE 233 (500)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~ 233 (500)
++..+|..++.+.+. +.+.++++..+.||+||+|||+.|..|.+||.+.+...............
T Consensus 87 ~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~---- 151 (323)
T 3f8d_A 87 VLLDIVEKIENRGDE-----------FVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPL---- 151 (323)
T ss_dssp EEESCEEEEEEC--C-----------EEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGG----
T ss_pred EEEEEEEEEEecCCE-----------EEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhH----
Confidence 888999999876542 46777787899999999999999999999997542211110111111000
Q ss_pred HHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 234 ~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.+ . ...+.+.+++.||++++++.+++
T Consensus 152 --------~~~~~v~vvG~G~~~~e~a~~l~~~g~~---v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~~~~~v~~ 215 (323)
T 3f8d_A 152 --------FKNRVVAVIGGGDSALEGAEILSSYSTK---VYLIHRRDTFKA--Q---PIYVETVKKKPNVEFVLNSVVKE 215 (323)
T ss_dssp --------GTTCEEEEECCSHHHHHHHHHHHHHSSE---EEEECSSSSCCS--C---HHHHHHHHTCTTEEEECSEEEEE
T ss_pred --------cCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEeCCCCCc--C---HHHHHHHHhCCCcEEEeCCEEEE
Confidence 0168999999999999999999988776 999999887755 1 22333344455999999999999
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
+..++.. ..++++. . ..++..++++|.||+++|++|+.++++.. +++++++
T Consensus 216 i~~~~~~---------------------~~v~~~~--~-~~g~~~~~~~D~vv~a~G~~p~~~~~~~~-----g~~~~~~ 266 (323)
T 3f8d_A 216 IKGDKVV---------------------KQVVVEN--L-KTGEIKELNVNGVFIEIGFDPPTDFAKSN-----GIETDTN 266 (323)
T ss_dssp EEESSSE---------------------EEEEEEE--T-TTCCEEEEECSEEEECCCEECCHHHHHHT-----TCCBCTT
T ss_pred EeccCce---------------------eEEEEEE--C-CCCceEEEEcCEEEEEECCCCChhHHhhc-----CeeecCC
Confidence 9875310 1344431 1 11133489999999999999998877654 4778899
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCC
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 454 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 454 (500)
|++.||++++| +.|+||++|||+..+ +.++.+..|+.||+.+|.+|...+.+++.
T Consensus 267 g~i~vd~~~~t-~~~~vya~GD~~~~~-----~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 267 GYIKVDEWMRT-SVPGVFAAGDCTSAW-----LGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp SSBCCCTTCBC-SSTTEEECSTTBSTT-----TTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CcEecCCCcee-cCCCEEEcceecCCC-----CcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 99999999999 999999999999852 12688999999999999999999876643
No 26
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-37 Score=320.75 Aligned_cols=292 Identities=20% Similarity=0.218 Sum_probs=222.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc----------chh-----hhc-----ccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLY-----ELL-----SGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~----------~~~-----~~~-----~g~----- 133 (500)
++||+|||||+||++||..|++ .|++|+|||++ .++... ++. ..+ .|.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 75 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ------LGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV 75 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 3789999999999999999999 68999999998 332110 000 000 000
Q ss_pred -ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc-cEEEecEEEEeCC
Q 010827 134 -VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLG 200 (500)
Q Consensus 134 -~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~d~lIlAtG 200 (500)
.+... +...+...+++.+++++.+++..++... ..+...++ ..+.||+||+|||
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~-------------v~V~~~~G~~~i~~d~lViATG 142 (455)
T 1ebd_A 76 TIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANT-------------VRVVNGDSAQTYTFKNAIIATG 142 (455)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTE-------------EEEEETTEEEEEECSEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCe-------------EEEEeCCCcEEEEeCEEEEecC
Confidence 00001 1111245566779999998776665432 24666666 6899999999999
Q ss_pred CCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 201 ~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
++|..|+++|.+.. +.+.+++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+
T Consensus 143 s~p~~~~~~g~~~~---v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~ 203 (455)
T 1ebd_A 143 SRPIELPNFKFSNR---ILDSTGALNLGE-------------VPKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAG 203 (455)
T ss_dssp EEECCBTTBCCCSS---EECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCCCCCCCCCccce---EecHHHHhcccc-------------CCCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCC
Confidence 99999988886532 345555433221 268999999999999999999988776 99999999
Q ss_pred ccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEE
Q 010827 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (500)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l 360 (500)
.+++.+++.+.+.+.+.|++.||++++++.|++++.++ +.+.+.+. ..++++++
T Consensus 204 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~~ 257 (455)
T 1ebd_A 204 EILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE-----------------------DGVTVTYE---ANGETKTI 257 (455)
T ss_dssp SSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-----------------------TEEEEEEE---ETTEEEEE
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEE---eCCceeEE
Confidence 99998999999999999999999999999999998644 34555542 12256789
Q ss_pred eecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHH
Q 010827 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (500)
Q Consensus 361 ~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~ 440 (500)
++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +.+...|..||+.
T Consensus 258 ~~D~vv~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~ 325 (455)
T 1ebd_A 258 DADYVLVTVGRRPNTDELGLE---QIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG--------PALAHKASYEGKV 325 (455)
T ss_dssp EESEEEECSCEEESCSSSSTT---TTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHH
T ss_pred EcCEEEECcCCCcccCcCChh---hcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHH
Confidence 999999999999998874211 22577888899999999998 99999999999986 6788899999999
Q ss_pred HHHHHHH
Q 010827 441 AGWNLWA 447 (500)
Q Consensus 441 aa~~i~~ 447 (500)
+|.+|.+
T Consensus 326 aa~~i~~ 332 (455)
T 1ebd_A 326 AAEAIAG 332 (455)
T ss_dssp HHHHHTS
T ss_pred HHHHHcC
Confidence 9999975
No 27
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.7e-37 Score=304.47 Aligned_cols=299 Identities=14% Similarity=0.107 Sum_probs=217.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc--------chhhhc--cccccCccccccHHHHh
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP--------MLYELL--SGEVDAWEIAPRFADLL 147 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~--------~~~~~~--~g~~~~~~~~~~~~~~~ 147 (500)
+.+||+|||||||||+||.+|++ .|++|+|||++......+ .+.++. .......++...+....
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~------~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~ 76 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR------SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQS 76 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHH
Confidence 35899999999999999999999 689999999975311111 111111 11122233445566677
Q ss_pred ccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCChHHHHH
Q 010827 148 ANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTLEDACR 226 (500)
Q Consensus 148 ~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~~~~~~ 226 (500)
++.++.+....+......... +.+.++++..+.||+||||||++|+.|++||.+..... .........
T Consensus 77 ~~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~ 145 (314)
T 4a5l_A 77 EKYGTTIITETIDHVDFSTQP-----------FKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG 145 (314)
T ss_dssp HHTTCEEECCCEEEEECSSSS-----------EEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT
T ss_pred hhcCcEEEEeEEEEeecCCCc-----------eEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhh
Confidence 778888888877777655442 35667778899999999999999999999997533211 111111111
Q ss_pred HHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEE
Q 010827 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV 306 (500)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~ 306 (500)
.... ..+++|+|||+|++|+|+|..|++++.+ ||++++...... ......+.+...+++.+
T Consensus 146 ~~~~-----------~~~~~vvViGgG~ig~e~A~~l~~~G~~---Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~ 206 (314)
T 4a5l_A 146 AVPI-----------FRNKVLMVVGGGDAAMEEALHLTKYGSK---VIILHRRDAFRA-----SKTMQERVLNHPKIEVI 206 (314)
T ss_dssp TSGG-----------GTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCCS-----CHHHHHHHHTCTTEEEE
T ss_pred hhhh-----------cCCCeEEEECCChHHHHHHHHHHHhCCe---eeeecccccccc-----cchhhhhhhcccceeeE
Confidence 1100 1168999999999999999999998887 999998765422 23344556677889999
Q ss_pred cCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccC
Q 010827 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (500)
Q Consensus 307 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~ 386 (500)
....+.++....... .++.+... ...+++++++|.|++++|++||++++..
T Consensus 207 ~~~~~~~i~~~~~~~--------------------~~~~~~~~---~~~~~~~i~~d~vi~a~G~~pn~~~l~~------ 257 (314)
T 4a5l_A 207 WNSELVELEGDGDLL--------------------NGAKIHNL---VSGEYKVVPVAGLFYAIGHSPNSKFLGG------ 257 (314)
T ss_dssp CSEEEEEEEESSSSE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTT------
T ss_pred eeeeeEEEEeeeecc--------------------ceeEEeec---ccccceeeccccceEecccccChhHhcc------
Confidence 999988887654222 34444421 2346789999999999999999998864
Q ss_pred CCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 387 ~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
.+.++++|.+ ||+++|| +.|+|||+|||+..+ .+++..|+.+|+.||.++.++|+
T Consensus 258 ~~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~-------~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 258 QVKTADDGYI-LTEGPKT-SVDGVFACGDVCDRV-------YRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp SSCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCc-------chHHHHHHHHHHHHHHHHHHHHh
Confidence 3667888876 8889999 999999999999862 35788999999999999999885
No 28
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.3e-37 Score=324.44 Aligned_cols=320 Identities=16% Similarity=0.210 Sum_probs=233.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc----------chh-----------hhc-ccc---
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLY-----------ELL-SGE--- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~----------~~~-----------~~~-~g~--- 133 (500)
.+||+||||||||++||..|++ .|++|+|||+++.++... ++. ... .|.
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~ 79 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ------LGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS 79 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC
Confidence 4799999999999999999999 688999999987543211 000 000 010
Q ss_pred ---ccCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCC-c-cEEEecEEEE
Q 010827 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLES-G-LIVEYDWLVL 197 (500)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-g-~~~~~d~lIl 197 (500)
.+...+ ...+..++++.+++++.+++..++... ..+.+.+ + ..+.||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~-------------~~v~~~~gg~~~~~~d~lVi 146 (474)
T 1zmd_A 80 EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQ-------------VTATKADGGTQVIDTKNILI 146 (474)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTE-------------EEEECTTSCEEEEEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCE-------------EEEEecCCCcEEEEeCEEEE
Confidence 000111 111245566779999998877775432 2466555 3 5799999999
Q ss_pred eCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEe
Q 010827 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (500)
Q Consensus 198 AtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~ 277 (500)
|||++|..|+++|.+.. .+.+.+++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |++++
T Consensus 147 AtGs~p~~p~i~g~~~~--~v~t~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~ 208 (474)
T 1zmd_A 147 ATGSEVTPFPGITIDED--TIVSSTGALSLKK-------------VPEKMVVIGAGVIGVELGSVWQRLGAD---VTAVE 208 (474)
T ss_dssp CCCEEECCCTTCCCCSS--SEECHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCCCCCCCCCCCCCcC--cEEcHHHHhhccc-------------cCceEEEECCCHHHHHHHHHHHHcCCE---EEEEe
Confidence 99999999999987532 2345544433211 268999999999999999999988876 99999
Q ss_pred cCCccCC-CCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcc-eeEeecccccCC
Q 010827 278 VETTICP-TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGL 355 (500)
Q Consensus 278 ~~~~~~~-~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~l~~~~~~~~~ 355 (500)
+.+.+++ .+++.+.+.+.+.+++.||++++++.|++++.++ ++ +.+.+.+. ..+
T Consensus 209 ~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~~v~~~~~-~~~ 264 (474)
T 1zmd_A 209 FLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKS-----------------------DGKIDVSIEAA-SGG 264 (474)
T ss_dssp SSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECT-----------------------TSCEEEEEEET-TSC
T ss_pred ccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-----------------------CceEEEEEEec-CCC
Confidence 9999998 8899999999999999999999999999998754 33 55543211 123
Q ss_pred CccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHH
Q 010827 356 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAF 435 (500)
Q Consensus 356 ~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~ 435 (500)
+++++++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +.++..|.
T Consensus 265 ~~~~i~~D~vv~a~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~ 332 (474)
T 1zmd_A 265 KAEVITCDVLLVCIGRRPFTKNLGLE---ELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAG--------PMLAHKAE 332 (474)
T ss_dssp CCEEEEESEEEECSCEEECCTTSSHH---HHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHH
T ss_pred CceEEEcCEEEECcCCCcCCCcCCch---hcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCC--------CccHHHHH
Confidence 66789999999999999998874210 22477888899999999998 99999999999986 67888999
Q ss_pred HHHHHHHHHHHHHHCC--CCCCCceecCceeEEEecCC
Q 010827 436 QQADFAGWNLWAAIND--RPLLPFRFQNLGEMMILGRN 471 (500)
Q Consensus 436 ~~g~~aa~~i~~~l~~--~~~~p~~~~~~~~~~~~G~~ 471 (500)
.||+.+|.+|.+.... ....|+..-..+.+.++|..
T Consensus 333 ~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~ 370 (474)
T 1zmd_A 333 DEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKS 370 (474)
T ss_dssp HHHHHHHHHHTTCCCCCCGGGCCEEECSSSEEEEEECC
T ss_pred HHHHHHHHHhcCCCCcCCCCCCCEEEECCCCeEEEeCC
Confidence 9999999999853110 01222222223466777743
No 29
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.3e-37 Score=321.16 Aligned_cols=295 Identities=20% Similarity=0.265 Sum_probs=224.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchh----h-----------hc------ccc---
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY----E-----------LL------SGE--- 133 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~----~-----------~~------~g~--- 133 (500)
.++||+||||||||+++|..|++ .|++|+|||+++.++...... . .+ .|.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~ 78 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ------LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES
T ss_pred ccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 45899999999999999999999 588999999987543221100 0 00 000
Q ss_pred ---ccCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecEEEE
Q 010827 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (500)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~lIl 197 (500)
.+...+ ...+..++++.+++++.+++..++... ..+.+.++ ..+.||+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~-------------~~v~~~~G~~~~i~~d~lIi 145 (470)
T 1dxl_A 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSE-------------ISVDTIEGENTVVKGKHIII 145 (470)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTE-------------EEECCSSSCCEEEECSEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCE-------------EEEEeCCCceEEEEcCEEEE
Confidence 000010 111234555678999998766665431 24555566 6899999999
Q ss_pred eCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEe
Q 010827 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (500)
Q Consensus 198 AtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~ 277 (500)
|||++|..|+++|.+.. .+.+..++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |++++
T Consensus 146 AtGs~p~~p~~~g~~~~--~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~ 207 (470)
T 1dxl_A 146 ATGSDVKSLPGVTIDEK--KIVSSTGALALSE-------------IPKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVE 207 (470)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHTTCSS-------------CCSEEEESCCSHHHHHHHHHHHHHTCE---EEEEC
T ss_pred CCCCCCCCCCCCCCCcc--cEEeHHHhhhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCCc---EEEEE
Confidence 99999999988886431 2344444433211 278999999999999999999998876 99999
Q ss_pred cCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCc
Q 010827 278 VETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES 357 (500)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~ 357 (500)
+.+.+++.+++.+.+.+.+.|++.||++++++.|++++.++ +.+.+.+.+.. .+++
T Consensus 208 ~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~~~-~g~~ 263 (470)
T 1dxl_A 208 FASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG-----------------------DGVKLTVEPSA-GGEQ 263 (470)
T ss_dssp SSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSS-----------------------SSEEEEEEESS-SCCC
T ss_pred cCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC-----------------------CeEEEEEEecC-CCcc
Confidence 99999999999999999999999999999999999998754 34555442110 1235
Q ss_pred cEEeecEEEEecCCCCCCCCC--CCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHH
Q 010827 358 QIFEADLVLWTVGSKPLLPHV--EPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAF 435 (500)
Q Consensus 358 ~~l~~D~vi~a~G~~p~~~~~--~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~ 435 (500)
+++++|.||+|+|++|+.+++ +.. +++++++|+|.||+++|| +.|+|||+|||+.. +.++..|.
T Consensus 264 ~~~~~D~vv~a~G~~p~~~~l~~~~~-----gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~ 329 (470)
T 1dxl_A 264 TIIEADVVLVSAGRTPFTSGLNLDKI-----GVETDKLGRILVNERFST-NVSGVYAIGDVIPG--------PMLAHKAE 329 (470)
T ss_dssp EEEEESEEECCCCEEECCTTSCCTTT-----TCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS--------CCCHHHHH
T ss_pred eEEECCEEEECCCCCcCCCCCCchhc-----CCccCCCCCEeECcCCcc-CCCCEEEEeccCCC--------CccHHHHH
Confidence 789999999999999998874 433 577888899999999998 99999999999986 67888999
Q ss_pred HHHHHHHHHHHH
Q 010827 436 QQADFAGWNLWA 447 (500)
Q Consensus 436 ~~g~~aa~~i~~ 447 (500)
.||+.+|.+|.+
T Consensus 330 ~~g~~aa~~i~g 341 (470)
T 1dxl_A 330 EDGVACVEYLAG 341 (470)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999985
No 30
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.2e-37 Score=321.03 Aligned_cols=295 Identities=19% Similarity=0.208 Sum_probs=224.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc----------chh------h----hc-ccc----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLY------E----LL-SGE---- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~----------~~~------~----~~-~g~---- 133 (500)
++||+|||||+||++||..|++ .|++|+|||+++.++... ++. . .. .|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~ 75 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ------LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGE 75 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGG
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999 689999999987543211 000 0 00 000
Q ss_pred ---ccCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecEEEE
Q 010827 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (500)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~lIl 197 (500)
.+...+ ...+..++++.+++++.+++..++... ..+.+.++ ..+.||+||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~-------------~~v~~~~G~~~~~~~d~lvi 142 (468)
T 2qae_A 76 GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHS-------------IRVNGLDGKQEMLETKKTII 142 (468)
T ss_dssp GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTE-------------EEEEETTSCEEEEEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCE-------------EEEEecCCceEEEEcCEEEE
Confidence 011111 111234556678999998777676432 24655666 6899999999
Q ss_pred eCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEe
Q 010827 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (500)
Q Consensus 198 AtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~ 277 (500)
|||++|..|+++|.+.. .+.+.+++..+.. .+++++|||+|.+|+|+|..|++.+.+ |++++
T Consensus 143 AtG~~p~~p~~~g~~~~--~v~t~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~ 204 (468)
T 2qae_A 143 ATGSEPTELPFLPFDEK--VVLSSTGALALPR-------------VPKTMVVIGGGVIGLELGSVWARLGAE---VTVVE 204 (468)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCCCcCCCCCCCCCcC--ceechHHHhhccc-------------CCceEEEECCCHHHHHHHHHHHHhCCE---EEEEe
Confidence 99999999988886431 2345555443321 278999999999999999999988776 99999
Q ss_pred cCCccCCCCCcchHHHHHHHH-HhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCC
Q 010827 278 VETTICPTGTPGNREAALKVL-SARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (500)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l-~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 356 (500)
+.+.+++.+++.+.+.+.+.+ ++.||++++++.|++++.++ +++.+.+.. ..++
T Consensus 205 ~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~--~~g~ 259 (468)
T 2qae_A 205 FAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-----------------------DSVSLEVEG--KNGK 259 (468)
T ss_dssp SSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-----------------------SSEEEEEEC--C---
T ss_pred cCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-----------------------CeEEEEEEc--CCCc
Confidence 999999999999999999999 99999999999999998754 345554421 0112
Q ss_pred ccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEeccccc-ccCCCCCCCCchHHHHH
Q 010827 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 435 (500)
Q Consensus 357 ~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~-~~~~~~~~~~~~~~~A~ 435 (500)
.+++++|.||+|+|++|+.+++.. +..+++++++|+|.||+++|| +.|+|||+|||+. . +.++..|.
T Consensus 260 ~~~i~~D~vv~a~G~~p~~~~l~l---~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~--------~~~~~~A~ 327 (468)
T 2qae_A 260 RETVTCEALLVSVGRRPFTGGLGL---DKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDKG--------PMLAHKAE 327 (468)
T ss_dssp EEEEEESEEEECSCEEECCTTSCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSSS--------CSCHHHHH
T ss_pred eEEEECCEEEECCCcccCCCCCCc---hhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCCC--------CccHhHHH
Confidence 368999999999999999887421 022577888899999999999 9999999999998 5 67889999
Q ss_pred HHHHHHHHHHHH
Q 010827 436 QQADFAGWNLWA 447 (500)
Q Consensus 436 ~~g~~aa~~i~~ 447 (500)
.||+.+|.+|.+
T Consensus 328 ~~g~~aa~~i~~ 339 (468)
T 2qae_A 328 DEGVACAEILAG 339 (468)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999975
No 31
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.6e-36 Score=314.07 Aligned_cols=289 Identities=20% Similarity=0.290 Sum_probs=222.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc----------------------chhhhcccc--
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------------------MLYELLSGE-- 133 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~----------------------~~~~~~~g~-- 133 (500)
.++||+|||||++|+++|.+|++ .|++|+|||++. ++... ..+. ..|.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~-~~g~~~ 74 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE------QGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPF-DGGIAA 74 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTT-TTTSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhh-cCCccC
Confidence 35899999999999999999999 689999999983 21110 0000 0010
Q ss_pred ----ccCccccc------------cHHHHhccC-CcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecE
Q 010827 134 ----VDAWEIAP------------RFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDW 194 (500)
Q Consensus 134 ----~~~~~~~~------------~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~ 194 (500)
.+...+.. .+.+++++. +++++.+++..++.... .+.+.++ ..+.||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~d~ 141 (467)
T 1zk7_A 75 TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSL-------------TVRLNEGGERVVMFDR 141 (467)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEE-------------EEEETTSSEEEEECSE
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEE-------------EEEeCCCceEEEEeCE
Confidence 00111100 123455666 89999998888875422 4666666 6899999
Q ss_pred EEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEE
Q 010827 195 LVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQ 274 (500)
Q Consensus 195 lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vt 274 (500)
||+|||++|..|++||.+.. .+.+.++...+.. .+++|+|||+|.+|+|+|..|++.+.+ |+
T Consensus 142 lviAtGs~p~~p~i~G~~~~--~~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vt 203 (467)
T 1zk7_A 142 CLVATGASPAVPPIPGLKES--PYWTSTEALASDT-------------IPERLAVIGSSVVALELAQAFARLGSK---VT 203 (467)
T ss_dssp EEECCCEEECCCCCTTTTTS--CCBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EE
T ss_pred EEEeCCCCCCCCCCCCCCcC--ceecHHHHhcccc-------------cCCEEEEECCCHHHHHHHHHHHHcCCE---EE
Confidence 99999999999999997542 2345555443322 278999999999999999999988776 99
Q ss_pred EEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccC
Q 010827 275 AINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKG 354 (500)
Q Consensus 275 lv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 354 (500)
++++.+.+++ +++.+.+.+.+.+++.||++++++.|++++.++ +.+.+.+
T Consensus 204 lv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~v~~------ 253 (467)
T 1zk7_A 204 VLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-----------------------GEFVLTT------ 253 (467)
T ss_dssp EECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-----------------------TEEEEEE------
T ss_pred EEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEE------
Confidence 9999999998 889999999999999999999999999998644 3444443
Q ss_pred CCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHH
Q 010827 355 LESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVA 434 (500)
Q Consensus 355 ~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A 434 (500)
++.++++|.||+|+|.+|+.+++.. +..+++++.+|+|.||+++|| +.|+||++|||+.. +..+..|
T Consensus 254 -~~~~i~aD~Vv~a~G~~p~~~~l~l---~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A 320 (467)
T 1zk7_A 254 -THGELRADKLLVATGRTPNTRSLAL---DAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ--------PQFVYVA 320 (467)
T ss_dssp -TTEEEEESEEEECSCEEESCTTSCG---GGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS--------CCCHHHH
T ss_pred -CCcEEEcCEEEECCCCCcCCCcCCc---hhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHH
Confidence 3457999999999999999876421 123577888899999999999 99999999999986 6678899
Q ss_pred HHHHHHHHHHHHHH
Q 010827 435 FQQADFAGWNLWAA 448 (500)
Q Consensus 435 ~~~g~~aa~~i~~~ 448 (500)
+.||+.+|.+|.+.
T Consensus 321 ~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 321 AAAGTRAAINMTGG 334 (467)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999753
No 32
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.8e-37 Score=300.53 Aligned_cols=287 Identities=18% Similarity=0.150 Sum_probs=218.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hhhhcc-ccccCccccccHHHHhccC-CcEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLS-GEVDAWEIAPRFADLLANT-GVQFF 155 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~-~v~~~ 155 (500)
++||+|||||++||++|..|++ .|++|+|||+++.....+. ...+.. .......+...+.+.+.++ ++.++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 75 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR------ARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWV 75 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 4799999999999999999999 6899999999765433221 111121 1233344556666777776 78998
Q ss_pred EeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCChHHHHHHHHHHHHH
Q 010827 156 KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTLEDACRVDRKLSEL 234 (500)
Q Consensus 156 ~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~~~~~~~~~~l~~~ 234 (500)
.++|+.++.+... +.+.++++..+.||+||+|||+.|..|.+||.+..... +... .......
T Consensus 76 ~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~----- 138 (297)
T 3fbs_A 76 EGRVTDAKGSFGE-----------FIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHC-PYCHGYE----- 138 (297)
T ss_dssp ESCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESC-HHHHTGG-----
T ss_pred EeEEEEEEEcCCe-----------EEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEc-ccCcchh-----
Confidence 8999999876541 46788888889999999999999999999997643111 1111 1101000
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCI 314 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i 314 (500)
..+++|+|||+|.+|+|+|..|++.+ + |+++++... .+.+.+.+.|++.||+++. +.++++
T Consensus 139 -------~~~~~v~vvG~G~~~~e~a~~l~~~g-~---v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i 199 (297)
T 3fbs_A 139 -------LDQGKIGVIAASPMAIHHALMLPDWG-E---TTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREI 199 (297)
T ss_dssp -------GTTCEEEEECCSTTHHHHHHHGGGTS-E---EEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEE
T ss_pred -------hcCCEEEEEecCccHHHHHHHhhhcC-c---EEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeee
Confidence 01689999999999999999998875 4 999988665 3445677889999999996 899998
Q ss_pred ecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC--C
Q 010827 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN--A 392 (500)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~--~ 392 (500)
..+ +.+.+. +++++++|.||+++|++|+.++++.++ ++++ +
T Consensus 200 ~~~------------------------~~v~~~--------~g~~~~~D~vi~a~G~~p~~~~~~~~g-----~~~~~~~ 242 (297)
T 3fbs_A 200 AGH------------------------ADVVLA--------DGRSIALAGLFTQPKLRITVDWIEKLG-----CAVEEGP 242 (297)
T ss_dssp ETT------------------------EEEEET--------TSCEEEESEEEECCEEECCCSCHHHHT-----CCEEEET
T ss_pred ecC------------------------CeEEeC--------CCCEEEEEEEEEccCcccCchhHHhcC-----CccccCC
Confidence 762 234443 677899999999999999988876543 5555 4
Q ss_pred CC-ceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 393 RG-QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 393 ~g-~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
+| ++.||++++| +.|+||++|||+.. ++.+..|+.||+.+|.+|.+.+.+.+
T Consensus 243 ~G~~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 243 MGSTIVTDPMKQT-TARGIFACGDVARP--------AGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp TEEEECCCTTCBC-SSTTEEECSGGGCT--------TCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCceEEeCCCCcc-CCCCEEEEeecCCc--------hHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 57 8999999998 99999999999986 78999999999999999999987654
No 33
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=3.9e-36 Score=310.98 Aligned_cols=303 Identities=23% Similarity=0.339 Sum_probs=235.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-hhhhccccc-cCccccccHHHHhccCCcEEEEe
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV-DAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
+||+|||||+||++||..|++.. +|++|+|||+++.+++.+. +..++.+.. ....+...+.+++++.+++++.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH----PDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----TTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhC----cCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 48999999999999999999842 5899999999987766542 333333432 34445555566777789999765
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcC---Ccc--EEEecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHHHH
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRK 230 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~--~~~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~~~ 230 (500)
.+..++...+ .+.+. ++. .+.||+||+|||++|..|++||.+ +.++...+.+++..+.+.
T Consensus 77 ~~v~~i~~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~ 143 (447)
T 1nhp_A 77 TEITAIQPKEH-------------QVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQK 143 (447)
T ss_dssp EEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCC-------------EEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHH
Confidence 7888887655 34432 243 489999999999999999999975 445666666776666554
Q ss_pred HHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC-CCCcchHHHHHHHHHhCCcEEEcCc
Q 010827 231 LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 231 l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~-~~~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
+.. ..+++++|||+|.+|+|+|..|++.+.+ |+++++.+.+++ .+++.+.+.+.+.+++.||++++++
T Consensus 144 ~~~--------~~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~ 212 (447)
T 1nhp_A 144 TVD--------PEVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGE 212 (447)
T ss_dssp HTC--------TTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESC
T ss_pred hhh--------cCCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCC
Confidence 320 0278999999999999999999988776 999999998888 5788899999999999999999999
Q ss_pred eEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCC
Q 010827 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (500)
Q Consensus 310 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~ 389 (500)
.|++++.++ ....+.+ ++.++++|.||+|+|++|+.++++.. ++
T Consensus 213 ~v~~i~~~~-----------------------~v~~v~~-------~~~~i~~d~vi~a~G~~p~~~~~~~~------~~ 256 (447)
T 1nhp_A 213 TVERYEGDG-----------------------RVQKVVT-------DKNAYDADLVVVAVGVRPNTAWLKGT------LE 256 (447)
T ss_dssp CEEEEECSS-----------------------BCCEEEE-------SSCEEECSEEEECSCEEESCGGGTTT------SC
T ss_pred EEEEEEccC-----------------------cEEEEEE-------CCCEEECCEEEECcCCCCChHHHHhh------hh
Confidence 999998643 2212332 34679999999999999998876541 56
Q ss_pred CCCCCceEeCCCcccCCCCCEEEecccccccCC-CCCC-CCchHHHHHHHHHHHHHHHHH
Q 010827 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 390 ~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~-~~~~-~~~~~~~A~~~g~~aa~~i~~ 447 (500)
++.+|+|.||+++|| +.|+||++|||+..+.. .+++ .+.++..|..||+.+|.+|.+
T Consensus 257 ~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 257 LHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp BCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred hcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 678899999999999 99999999999975322 1221 356899999999999999975
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.6e-37 Score=319.58 Aligned_cols=301 Identities=19% Similarity=0.231 Sum_probs=221.8
Q ss_pred CCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchh---------------hh----c--ccc
Q 010827 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY---------------EL----L--SGE 133 (500)
Q Consensus 75 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~---------------~~----~--~g~ 133 (500)
+.++.+||+||||||||++||..|++ .|++|+|||+++.++...... .. + .|.
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~ 94 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQ------LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGV 94 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTE
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCc
Confidence 34456899999999999999999999 689999999987654321100 00 0 000
Q ss_pred ------ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecE
Q 010827 134 ------VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDW 194 (500)
Q Consensus 134 ------~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~ 194 (500)
.+... +...+...++..+++++.+.+..++... ..+...++ ..+.||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~-------------~~v~~~~g~~~~~~~d~ 161 (491)
T 3urh_A 95 EVANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGK-------------VSVTNEKGEEQVLEAKN 161 (491)
T ss_dssp ECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSE-------------EEEECTTSCEEEEECSE
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCE-------------EEEEeCCCceEEEEeCE
Confidence 00000 0111334456678999999877765432 24665565 5799999
Q ss_pred EEEeCCCCCCCCCCCCccc--cccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCe
Q 010827 195 LVLSLGAEPKLDVVPGAAE--FAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272 (500)
Q Consensus 195 lIlAtG~~p~~~~i~G~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~ 272 (500)
||||||+.| +.+||..+ ....+.+..+...+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 162 lViATGs~p--~~ipg~~~~~~~~~~~~~~~~~~~~-------------~~~~~vvViGgG~~g~E~A~~l~~~g~~--- 223 (491)
T 3urh_A 162 VVIATGSDV--AGIPGVEVAFDEKTIVSSTGALALE-------------KVPASMIVVGGGVIGLELGSVWARLGAK--- 223 (491)
T ss_dssp EEECCCEEC--CCBTTBCCCCCSSSEECHHHHTSCS-------------SCCSEEEEECCSHHHHHHHHHHHHHTCE---
T ss_pred EEEccCCCC--CCCCCcccccCCeeEEehhHhhhhh-------------hcCCeEEEECCCHHHHHHHHHHHHcCCE---
Confidence 999999986 45677642 112233444333221 1278999999999999999999998877
Q ss_pred EEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccc
Q 010827 273 VQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI 352 (500)
Q Consensus 273 vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 352 (500)
|+++++.+.+++.+++.+.+.+.+.+++.||++++++.+++++.++ +.+.+.+.+..
T Consensus 224 Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-----------------------~~~~v~~~~~~ 280 (491)
T 3urh_A 224 VTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-----------------------DGAKVTFEPVK 280 (491)
T ss_dssp EEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEETT
T ss_pred EEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-----------------------CEEEEEEEecC
Confidence 9999999999999999999999999999999999999999998755 44555443211
Q ss_pred cCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHH
Q 010827 353 KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQ 432 (500)
Q Consensus 353 ~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~ 432 (500)
+++.+++++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +.++.
T Consensus 281 -~g~~~~i~~D~Vi~a~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~ 347 (491)
T 3urh_A 281 -GGEATTLDAEVVLIATGRKPSTDGLGLA---KAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRG--------PMLAH 347 (491)
T ss_dssp -SCCCEEEEESEEEECCCCEECCTTSCHH---HHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHH
T ss_pred -CCceEEEEcCEEEEeeCCccCCCccCch---hcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------ccchh
Confidence 1234789999999999999998874211 23578889999999999999 99999999999975 68899
Q ss_pred HHHHHHHHHHHHHHHH
Q 010827 433 VAFQQADFAGWNLWAA 448 (500)
Q Consensus 433 ~A~~~g~~aa~~i~~~ 448 (500)
.|..||+.+|.+|.+.
T Consensus 348 ~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 348 KAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999999863
No 35
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=317.22 Aligned_cols=289 Identities=21% Similarity=0.260 Sum_probs=221.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hhc-----ccc----
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL-----SGE---- 133 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~~-----~g~---- 133 (500)
..+||+||||||||++||..|++ .|++|+|||++. ++.. | ++. ..+ .+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~ 82 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS------YGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNL 82 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH------CCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccc
Confidence 35899999999999999999999 689999999974 2211 0 000 000 000
Q ss_pred --------ccCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCcc--EEEe
Q 010827 134 --------VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEY 192 (500)
Q Consensus 134 --------~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~~ 192 (500)
.+...+ ...+...+++.+++++.+++..++... ..+...++. .+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~-------------~~v~~~~g~~~~~~~ 149 (479)
T 2hqm_A 83 PLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGN-------------VEVQKRDNTTEVYSA 149 (479)
T ss_dssp CCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSC-------------EEEEESSSCCEEEEE
T ss_pred ccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCE-------------EEEEeCCCcEEEEEe
Confidence 000000 011234455678999998887765432 145555665 7999
Q ss_pred cEEEEeCCCCCCCC-CCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcC
Q 010827 193 DWLVLSLGAEPKLD-VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG 271 (500)
Q Consensus 193 d~lIlAtG~~p~~~-~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~ 271 (500)
|+||+|||++|..| ++||.+ . ..+.++...+.. .+++++|||+|.+|+|+|..|++.+.+
T Consensus 150 d~lviAtGs~p~~p~~i~g~~-~---~~~~~~~~~l~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~~-- 210 (479)
T 2hqm_A 150 NHILVATGGKAIFPENIPGFE-L---GTDSDGFFRLEE-------------QPKKVVVVGAGYIGIELAGVFHGLGSE-- 210 (479)
T ss_dssp EEEEECCCEEECCCTTSTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECSSHHHHHHHHHHHHTTCE--
T ss_pred CEEEEcCCCCCCCCCCCCCcc-c---ccchHHHhcccc-------------cCCeEEEECCCHHHHHHHHHHHHcCCc--
Confidence 99999999999999 899863 2 234444433321 278999999999999999999988776
Q ss_pred eEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCc-ceeEeecc
Q 010827 272 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD-KYILELQP 350 (500)
Q Consensus 272 ~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~l~~~~ 350 (500)
|+++++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.+++ + .+.+.+.
T Consensus 211 -Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~~v~~~- 266 (479)
T 2hqm_A 211 -THLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE----------------------TDKLKIHMN- 266 (479)
T ss_dssp -EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-----------------------CCCEEEEET-
T ss_pred -eEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC----------------------CcEEEEEEC-
Confidence 99999999999999999999999999999999999999999986431 2 2445542
Q ss_pred cccCCCc-cEEeecEEEEecCCCCCCCC-CCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCC
Q 010827 351 AIKGLES-QIFEADLVLWTVGSKPLLPH-VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP 428 (500)
Q Consensus 351 ~~~~~~~-~~l~~D~vi~a~G~~p~~~~-~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~ 428 (500)
++ +++++|.||+|+|++|+..+ ++. .+++++++|+|.||+++|| +.|+|||+|||+.. +
T Consensus 267 -----~G~~~i~~D~vv~a~G~~p~~~l~l~~-----~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~ 327 (479)
T 2hqm_A 267 -----DSKSIDDVDELIWTIGRKSHLGMGSEN-----VGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGK--------V 327 (479)
T ss_dssp -----TSCEEEEESEEEECSCEEECCCSSGGG-----GTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTS--------S
T ss_pred -----CCcEEEEcCEEEECCCCCCccccChhh-----cCceECCCCCEeECCCCcc-CCCCEEEEEecCCC--------c
Confidence 45 78999999999999999855 343 3588888999999999998 99999999999865 5
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 010827 429 ATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 429 ~~~~~A~~~g~~aa~~i~~~ 448 (500)
.++..|..||+.+|.+|.+.
T Consensus 328 ~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 328 ELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CCHHHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHHHHHHhcCC
Confidence 78899999999999999853
No 36
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.4e-37 Score=321.60 Aligned_cols=292 Identities=18% Similarity=0.180 Sum_probs=220.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hhc------ccc----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL------SGE---- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~~------~g~---- 133 (500)
.+||+||||||||+++|..|++ .|++|+|||++. ++.. | ++. ..+ .+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~------~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~ 75 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ------LGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEV 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3799999999999999999999 689999999983 2211 0 000 000 000
Q ss_pred -ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecEEEEeC
Q 010827 134 -VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSL 199 (500)
Q Consensus 134 -~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~lIlAt 199 (500)
.+... +...+.+.+++.+++++.+....++.. . ..+.+.++ ..+.||+||+||
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~-~------------v~V~~~~G~~~~~~~d~lViAt 142 (464)
T 2a8x_A 76 TFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADAN-T------------LLVDLNDGGTESVTFDNAIIAT 142 (464)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSS-E------------EEEEETTSCCEEEEEEEEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC-e------------EEEEeCCCceEEEEcCEEEECC
Confidence 00000 011123455667899988865544321 1 24555666 689999999999
Q ss_pred CCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 200 GAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 200 G~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
|+.|..|+++|.+.. +.+.++...+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.
T Consensus 143 G~~~~~~~~~g~~~~---~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~ 203 (464)
T 2a8x_A 143 GSSTRLVPGTSLSAN---VVTYEEQILSRE-------------LPKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFL 203 (464)
T ss_dssp CEEECCCTTCCCBTT---EECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCCCCCCCCCCCCce---EEecHHHhhccc-------------cCCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcC
Confidence 999998988886542 345555443221 268999999999999999999988876 9999999
Q ss_pred CccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccE
Q 010827 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359 (500)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~ 359 (500)
+.+++.+++.+.+.+.+.|++.||++++++.+++++.++ +.+.+.+. ..++.++
T Consensus 204 ~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~ 257 (464)
T 2a8x_A 204 PRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGG-----------------------SQVTVTVT---KDGVAQE 257 (464)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECS-----------------------SCEEEEEE---SSSCEEE
T ss_pred CccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-----------------------CeEEEEEE---cCCceEE
Confidence 999999999999999999999999999999999998754 34555542 1123478
Q ss_pred EeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHH
Q 010827 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (500)
Q Consensus 360 l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~ 439 (500)
+++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +.++..|..||+
T Consensus 258 ~~~D~vv~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~ 325 (464)
T 2a8x_A 258 LKAEKVLQAIGFAPNVEGYGLD---KAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL--------LQLAHVAEAQGV 325 (464)
T ss_dssp EEESEEEECSCEEECCSSSCHH---HHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS--------SCSHHHHHHHHH
T ss_pred EEcCEEEECCCCCccCCCCCch---hcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC--------ccCHHHHHHHHH
Confidence 9999999999999998874210 22577888899999999998 99999999999986 678889999999
Q ss_pred HHHHHHHH
Q 010827 440 FAGWNLWA 447 (500)
Q Consensus 440 ~aa~~i~~ 447 (500)
.+|.+|.+
T Consensus 326 ~aa~~i~g 333 (464)
T 2a8x_A 326 VAAETIAG 333 (464)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999975
No 37
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.3e-36 Score=315.44 Aligned_cols=318 Identities=18% Similarity=0.208 Sum_probs=229.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch----------h------h----hc-ccc----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML----------Y------E----LL-SGE---- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~----------~------~----~~-~g~---- 133 (500)
.+||+||||||+|+++|..|++ .|++|+|||+++.++..... . . .. .|.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ------LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999 68999999997654321100 0 0 00 000
Q ss_pred ---ccCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cE------EE
Q 010827 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI------VE 191 (500)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~------~~ 191 (500)
.+...+ ...+...+++.+++++.+.....+.. . ..+.+.++ .. +.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~-~------------v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDET-K------------IRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSS-E------------EEEECCTTCTTCCSSCEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCC-e------------EEEEecCCCcccccccceEE
Confidence 000000 01123455667899998865443221 1 24555555 46 99
Q ss_pred ecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcC
Q 010827 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG 271 (500)
Q Consensus 192 ~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~ 271 (500)
||+||+|||++|. .+||.......+.+.+++..+.. .+++|+|||+|.+|+|+|..|++.+.+
T Consensus 146 ~d~lViAtGs~p~--~~~g~~~~~~~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~-- 208 (478)
T 1v59_A 146 VKNIIVATGSEVT--PFPGIEIDEEKIVSSTGALSLKE-------------IPKRLTIIGGGIIGLEMGSVYSRLGSK-- 208 (478)
T ss_dssp EEEEEECCCEEEC--CCTTCCCCSSSEECHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred eCEEEECcCCCCC--CCCCCCCCCceEEcHHHHHhhhc-------------cCceEEEECCCHHHHHHHHHHHHcCCE--
Confidence 9999999999874 45554311123445555443322 268999999999999999999998876
Q ss_pred eEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEec--CccccccccCCCCCcccccccccCCcceeEeec
Q 010827 272 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRR--VGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (500)
Q Consensus 272 ~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 349 (500)
|+++++.+.+++.+++.+.+.+.+.+++.||++++++.|++++. ++ +.+.+.+.
T Consensus 209 -Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-----------------------~~~~v~~~ 264 (478)
T 1v59_A 209 -VTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK-----------------------NVVEIVVE 264 (478)
T ss_dssp -EEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT-----------------------TEEEEEEE
T ss_pred -EEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC-----------------------CeEEEEEE
Confidence 99999999999989999999999999999999999999999986 33 33444432
Q ss_pred ccccCCCccEEeecEEEEecCCCCCCC--CCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCC
Q 010827 350 PAIKGLESQIFEADLVLWTVGSKPLLP--HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPL 427 (500)
Q Consensus 350 ~~~~~~~~~~l~~D~vi~a~G~~p~~~--~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~ 427 (500)
+. ..++++++++|.||+|+|++|+.+ +++.. +++++++|+|.||+++|| +.|+|||+|||+..
T Consensus 265 ~~-~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~-----g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~-------- 329 (478)
T 1v59_A 265 DT-KTNKQENLEAEVLLVAVGRRPYIAGLGAEKI-----GLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFG-------- 329 (478)
T ss_dssp ET-TTTEEEEEEESEEEECSCEEECCTTSCTTTT-----TCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------
T ss_pred Ec-CCCCceEEECCEEEECCCCCcCCCCCCchhc-----CceeCCCCCEeECcCCcc-CCCCEEEeeccCCC--------
Confidence 11 122457899999999999999987 55554 477888999999999998 99999999999986
Q ss_pred CchHHHHHHHHHHHHHHHHHHHC--CCCCCCceecCceeEEEecCC
Q 010827 428 PATAQVAFQQADFAGWNLWAAIN--DRPLLPFRFQNLGEMMILGRN 471 (500)
Q Consensus 428 ~~~~~~A~~~g~~aa~~i~~~l~--~~~~~p~~~~~~~~~~~~G~~ 471 (500)
+.+...|..||+.+|.+|.+.-. .....|+.+-..+.+.++|..
T Consensus 330 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~ 375 (478)
T 1v59_A 330 PMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKT 375 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECC
T ss_pred cccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECC
Confidence 67888999999999999987321 122335444445577777743
No 38
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.4e-36 Score=320.06 Aligned_cols=313 Identities=18% Similarity=0.202 Sum_probs=233.4
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc----hhh--h------------------ccc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----LYE--L------------------LSG 132 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~----~~~--~------------------~~g 132 (500)
...+||+|||||++|++||.+|++ .|++|+|||+++.++.... .+. . +..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~ 114 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRA------MGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPD 114 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHH
Confidence 445899999999999999999999 6899999999874332110 000 0 001
Q ss_pred ccc----Ccccccc----HH---HHh-----ccCCcEEE-EeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEE
Q 010827 133 EVD----AWEIAPR----FA---DLL-----ANTGVQFF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWL 195 (500)
Q Consensus 133 ~~~----~~~~~~~----~~---~~~-----~~~~v~~~-~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~l 195 (500)
... ...+... +. .++ ++.+++++ .+++..++.. .+.+. +..+.||+|
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~---------------~v~~~-g~~~~~d~l 178 (523)
T 1mo9_A 115 MTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNH---------------TVEAA-GKVFKAKNL 178 (523)
T ss_dssp CTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETT---------------EEEET-TEEEEBSCE
T ss_pred HHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCC---------------EEEEC-CEEEEeCEE
Confidence 000 1111111 12 445 67789998 6788877642 45554 568999999
Q ss_pred EEeCCCCCCCCCCCCccccccCCCChHHHH-HHHHHHHHHHHhccCCCCc-cEEEEECCChhHHHHHHHHHHHHhhcCeE
Q 010827 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDAC-RVDRKLSELERRNFGKDSL-IRVAVVGCGYSGVELAATVSERLEEKGIV 273 (500)
Q Consensus 196 IlAtG~~p~~~~i~G~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~-k~V~VvGgG~~g~e~A~~l~~~~~~~~~v 273 (500)
|+|||++|..|++||.+.. .+.+..+.. .+.. .+ ++++|||+|.+|+|+|..+++.+.+ |
T Consensus 179 ViATGs~p~~p~i~G~~~~--~v~~~~~~~~~l~~-------------~~g~~vvViGgG~~g~E~A~~l~~~G~~---V 240 (523)
T 1mo9_A 179 ILAVGAGPGTLDVPGVNAK--GVFDHATLVEELDY-------------EPGSTVVVVGGSKTAVEYGCFFNATGRR---T 240 (523)
T ss_dssp EECCCEECCCCCSTTTTSB--TEEEHHHHHHHCCS-------------CCCSEEEEECCSHHHHHHHHHHHHTTCE---E
T ss_pred EECCCCCCCCCCCCCcccC--cEeeHHHHHHHHHh-------------cCCCeEEEECCCHHHHHHHHHHHHcCCe---E
Confidence 9999999999999997532 123444433 2111 14 8999999999999999999988776 9
Q ss_pred EEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcc---eeEeecc
Q 010827 274 QAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK---YILELQP 350 (500)
Q Consensus 274 tlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~l~~~~ 350 (500)
+++++.+.+++.+++.+.+.+.+.+++.||++++++.|+++..+++ +. +.+.+.
T Consensus 241 tlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~----------------------~~v~~~~v~~~- 297 (523)
T 1mo9_A 241 VMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN----------------------GRVQAVVAMTP- 297 (523)
T ss_dssp EEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT----------------------SBEEEEEEEET-
T ss_pred EEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC----------------------CceEEEEEEEC-
Confidence 9999999999999999999999999999999999999999986431 22 455542
Q ss_pred cccCCCcc-EEeecEEEEecCCCCCCC-CCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCC
Q 010827 351 AIKGLESQ-IFEADLVLWTVGSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP 428 (500)
Q Consensus 351 ~~~~~~~~-~l~~D~vi~a~G~~p~~~-~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~ 428 (500)
+++ ++++|.||+|+|++|+.+ +++.. +++++++|+|.||+++|| +.|+|||+|||+.. +
T Consensus 298 -----~G~~~i~aD~Vv~A~G~~p~~~~~l~~~-----gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~ 358 (523)
T 1mo9_A 298 -----NGEMRIETDFVFLGLGEQPRSAELAKIL-----GLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG--------P 358 (523)
T ss_dssp -----TEEEEEECSCEEECCCCEECCHHHHHHH-----TCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS--------S
T ss_pred -----CCcEEEEcCEEEECcCCccCCccCHHHc-----CCccCCCCCEEECCCCcc-CCCCEEEEeecCCC--------c
Confidence 455 899999999999999987 56544 477888999999999999 99999999999986 5
Q ss_pred chHHHHHHHHHHHHHHHHHHHCC--CCCCCceecCceeEEEecCC
Q 010827 429 ATAQVAFQQADFAGWNLWAAIND--RPLLPFRFQNLGEMMILGRN 471 (500)
Q Consensus 429 ~~~~~A~~~g~~aa~~i~~~l~~--~~~~p~~~~~~~~~~~~G~~ 471 (500)
.+...|..||+.+|.+|.+.-.. ....|+..-..+.+.++|..
T Consensus 359 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~ 403 (523)
T 1mo9_A 359 MEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMG 403 (523)
T ss_dssp CSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECC
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCC
Confidence 78889999999999999862111 22345444444567777743
No 39
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-37 Score=323.05 Aligned_cols=297 Identities=22% Similarity=0.238 Sum_probs=225.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh---------hhc-ccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY---------ELL-SGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~---------~~~-~g~----- 133 (500)
.+||+|||||+||++||..|++.. ..|++|+|||+++ ++.. | ++. .+. .|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~---~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH---PETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC---TTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC---CCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 379999999999999999999941 0189999999986 3211 0 000 000 010
Q ss_pred ---ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCcc--EEEecEEEE
Q 010827 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEYDWLVL 197 (500)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~~d~lIl 197 (500)
.+... +...+.+++++.+++++.+++..++..... .. ....+..+++. .+.||+||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~--~~-----~~~~V~~~~g~~~~~~~d~lvi 150 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGL--AR-----HRIKATAADGSTSEHEADVVLV 150 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCC--SS-----EEEEEECTTSCEEEEEESEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccC--CC-----CEEEEEeCCCcEEEEEeCEEEE
Confidence 01111 111234566678999999988777762000 00 01245556665 799999999
Q ss_pred eCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEe
Q 010827 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (500)
Q Consensus 198 AtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~ 277 (500)
|||++|..|++||.+.. .+.+..+...+.. .+++++|||+|.+|+|+|..+.+.+.+ |++++
T Consensus 151 ATGs~p~~p~i~g~~~~--~v~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~ 212 (499)
T 1xdi_A 151 ATGASPRILPSAQPDGE--RILTWRQLYDLDA-------------LPDHLIVVGSGVTGAEFVDAYTELGVP---VTVVA 212 (499)
T ss_dssp CCCEEECCCGGGCCCSS--SEEEGGGGGGCSS-------------CCSSEEEESCSHHHHHHHHHHHHTTCC---EEEEC
T ss_pred cCCCCCCCCCCCCCCcC--cEEehhHhhhhhc-------------cCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEE
Confidence 99999999989887532 1234444333221 268999999999999999999988776 99999
Q ss_pred cCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCc
Q 010827 278 VETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES 357 (500)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~ 357 (500)
+.+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +++.+.+. ++
T Consensus 213 ~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g 263 (499)
T 1xdi_A 213 SQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTG-----------------------AGVLVTMT------DG 263 (499)
T ss_dssp SSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS-----------------------SSEEEEET------TS
T ss_pred cCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CEEEEEEC------CC
Confidence 99999999999999999999999999999999999998754 45666532 66
Q ss_pred cEEeecEEEEecCCCCCCCC--CCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHH
Q 010827 358 QIFEADLVLWTVGSKPLLPH--VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAF 435 (500)
Q Consensus 358 ~~l~~D~vi~a~G~~p~~~~--~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~ 435 (500)
+++++|.||+|+|.+|+.++ ++.. +++++++|+|.||+++|| +.|+|||+|||+.. +.++..|.
T Consensus 264 ~~i~aD~Vv~a~G~~p~~~~l~l~~~-----gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~l~~~A~ 329 (499)
T 1xdi_A 264 RTVEGSHALMTIGSVPNTSGLGLERV-----GIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL--------LPLASVAA 329 (499)
T ss_dssp CEEEESEEEECCCEEECCSSSCTTTT-----TCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS--------CSCHHHHH
T ss_pred cEEEcCEEEECCCCCcCCCcCCchhc-----CceECCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHH
Confidence 78999999999999999888 4443 578888899999999999 99999999999986 56888999
Q ss_pred HHHHHHHHHHHH
Q 010827 436 QQADFAGWNLWA 447 (500)
Q Consensus 436 ~~g~~aa~~i~~ 447 (500)
.||+.+|.+|.+
T Consensus 330 ~~g~~aa~~i~g 341 (499)
T 1xdi_A 330 MQGRIAMYHALG 341 (499)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 999999999975
No 40
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.2e-36 Score=314.78 Aligned_cols=286 Identities=21% Similarity=0.310 Sum_probs=219.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hhc----c--cc----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL----S--GE---- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~~----~--g~---- 133 (500)
++||+|||||++|+++|..|++ .|++|+|||++. ++.. | ++. ..+ . +.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~ 76 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM------YGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTI 76 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 4799999999999999999998 689999999984 2211 0 000 000 0 00
Q ss_pred --ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC
Q 010827 134 --VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (500)
Q Consensus 134 --~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG 200 (500)
.+... +...+...+++.+++++.+++..++.. .+.+ ++..+.||+||+|||
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtG 140 (450)
T 1ges_A 77 NKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAK---------------TLEV-NGETITADHILIATG 140 (450)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETT---------------EEEE-TTEEEEEEEEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC---------------EEEE-CCEEEEeCEEEECCC
Confidence 00000 111223344567899999887777542 4555 567899999999999
Q ss_pred CCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 201 ~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
++|..|++||.+ . ..+..++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+
T Consensus 141 s~p~~p~i~g~~-~---~~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~ 200 (450)
T 1ges_A 141 GRPSHPDIPGVE-Y---GIDSDGFFALPA-------------LPERVAVVGAGYIGVELGGVINGLGAK---THLFEMFD 200 (450)
T ss_dssp EEECCCCSTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCCCCCCCCcc-c---eecHHHhhhhhh-------------cCCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCC
Confidence 999999999863 2 234554433221 278999999999999999999988776 99999999
Q ss_pred ccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEE
Q 010827 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (500)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l 360 (500)
.+++.+++.+.+.+.+.+++.||++++++.|++++.+++ +.+.+.+. +++++
T Consensus 201 ~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~i 252 (450)
T 1ges_A 201 APLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD----------------------GSLTLELE------DGRSE 252 (450)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT----------------------SCEEEEET------TSCEE
T ss_pred chhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC----------------------cEEEEEEC------CCcEE
Confidence 999999999999999999999999999999999987431 22455542 56689
Q ss_pred eecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHH
Q 010827 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (500)
Q Consensus 361 ~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~ 440 (500)
++|.||+|+|++|+.+++.. +..+++++++|+|.||+++|| +.|+|||+|||+.. +..+..|..||+.
T Consensus 253 ~~D~vv~a~G~~p~~~~l~~---~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~ 320 (450)
T 1ges_A 253 TVDCLIWAIGREPANDNINL---EAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGA--------VELTPVAVAAGRR 320 (450)
T ss_dssp EESEEEECSCEEESCTTSCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTS--------CCCHHHHHHHHHH
T ss_pred EcCEEEECCCCCcCCCCCCc---hhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCC--------CccHHHHHHHHHH
Confidence 99999999999999875421 123578888999999999998 99999999999875 5788899999999
Q ss_pred HHHHHHH
Q 010827 441 AGWNLWA 447 (500)
Q Consensus 441 aa~~i~~ 447 (500)
+|.+|.+
T Consensus 321 aa~~i~~ 327 (450)
T 1ges_A 321 LSERLFN 327 (450)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999985
No 41
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.1e-36 Score=316.47 Aligned_cols=315 Identities=20% Similarity=0.281 Sum_probs=233.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhcc---------------------ccccCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLS---------------------GEVDAW 137 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~---------------------g~~~~~ 137 (500)
.+||+||||||||++||..|++ .|++|+|||+++.++.........+ ...+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~------~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK------AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHH
Confidence 4799999999999999999999 6899999998876543211100000 000111
Q ss_pred c----------cc--ccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccE--EEecEEEEeCCCCC
Q 010827 138 E----------IA--PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLI--VEYDWLVLSLGAEP 203 (500)
Q Consensus 138 ~----------~~--~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~--~~~d~lIlAtG~~p 203 (500)
. +. ..+..++++.+++++.+++..++.... .+...++.. +.||+||+|||+.|
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~-------------~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHV-------------IVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEE-------------EEEETTSCEEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeE-------------EEEcCCCcEEEEecCEEEECCCCCc
Confidence 1 11 334455667799999999988886532 577777777 99999999999999
Q ss_pred CCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC
Q 010827 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (500)
Q Consensus 204 ~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~ 283 (500)
..|++||.+ .+.+..++..+...+ ...+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.++
T Consensus 145 ~~p~i~G~~----~~~t~~~~~~~~~~l---------~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l 208 (466)
T 3l8k_A 145 AKLRLPGVE----YCLTSDDIFGYKTSF---------RKLPQDMVIIGAGYIGLEIASIFRLMGVQ---THIIEMLDRAL 208 (466)
T ss_dssp CCCCCTTGG----GSBCHHHHHSTTCSC---------CSCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred cCCCCCCcc----ceEeHHHHHHHHHHH---------hhCCCeEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCcCC
Confidence 999999975 245565554222111 11278999999999999999999998876 99999999999
Q ss_pred CCC-CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEee
Q 010827 284 PTG-TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362 (500)
Q Consensus 284 ~~~-~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~ 362 (500)
+.+ ++++.+.+.+.++ |++++++.|++++.+++ +++.+.+.+ .+++..++++
T Consensus 209 ~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~----------------------~~v~v~~~~--~~G~~~~i~~ 261 (466)
T 3l8k_A 209 ITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKD----------------------DEYEVIYST--KDGSKKSIFT 261 (466)
T ss_dssp TTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEET----------------------TEEEEEECC--TTSCCEEEEE
T ss_pred CCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCC----------------------CcEEEEEEe--cCCceEEEEc
Confidence 988 8888888888776 99999999999987431 234454421 0123348999
Q ss_pred cEEEEecCCCCCCCC-CCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHH
Q 010827 363 DLVLWTVGSKPLLPH-VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 441 (500)
Q Consensus 363 D~vi~a~G~~p~~~~-~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~a 441 (500)
|.||+|+|++|+.++ ++. .+++++++| |.||+++|| +.|+|||+|||+.. ++++..|..||+.+
T Consensus 262 D~vi~a~G~~p~~~l~l~~-----~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~a 326 (466)
T 3l8k_A 262 NSVVLAAGRRPVIPEGARE-----IGLSISKTG-IVVDETMKT-NIPNVFATGDANGL--------APYYHAAVRMSIAA 326 (466)
T ss_dssp SCEEECCCEEECCCTTTGG-----GTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS--------CCSHHHHHHHHHHH
T ss_pred CEEEECcCCCcccccchhh-----cCceeCCCC-EeECCCccC-CCCCEEEEEecCCC--------CccHhHHHHHHHHH
Confidence 999999999999873 333 358888899 999999999 99999999999986 68899999999999
Q ss_pred HHHHHHH--HC---CCCCCCceecCceeEEEecC
Q 010827 442 GWNLWAA--IN---DRPLLPFRFQNLGEMMILGR 470 (500)
Q Consensus 442 a~~i~~~--l~---~~~~~p~~~~~~~~~~~~G~ 470 (500)
|.+|.+. .. .....|+..-..+.+.++|-
T Consensus 327 a~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~ 360 (466)
T 3l8k_A 327 ANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGI 360 (466)
T ss_dssp HHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEEC
T ss_pred HHHHhCCCCCccccCCCCCcEEEECCCCeEEecC
Confidence 9999864 11 12233433323346677774
No 42
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.3e-36 Score=298.66 Aligned_cols=307 Identities=18% Similarity=0.194 Sum_probs=227.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch--hh----hccc--cccCccccccHHHHhccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML--YE----LLSG--EVDAWEIAPRFADLLANT 150 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~--~~----~~~g--~~~~~~~~~~~~~~~~~~ 150 (500)
+++|+|||||+||+++|..|++ +|++|+|||+++.+.+.... +. ...+ ......+...+.+.+++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 78 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM------RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPF 78 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGG
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999998 68999999998765432210 00 0001 111233344556666777
Q ss_pred CcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCC---CCCCCCCCCccccc-----cCCCCh
Q 010827 151 GVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA-----FPFSTL 221 (500)
Q Consensus 151 ~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~---~p~~~~i~G~~~~~-----~~~~~~ 221 (500)
+++++.+ +|..++.... .+.+.++++..+.||+||+|||+ .|..|+++|.+.+. ..+.+.
T Consensus 79 ~~~~~~~~~v~~i~~~~~-----------~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~ 147 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGD-----------LFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK 147 (335)
T ss_dssp CCEEEESCCEEEEEEETT-----------EEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG
T ss_pred CCEEEeCCEEEEEEECCC-----------EEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch
Confidence 8888765 8888876532 13577777778999999999999 57778888864321 111121
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhC
Q 010827 222 EDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSAR 301 (500)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (500)
.+ + .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.+. +...+.+.+.+++.
T Consensus 148 ~~---~---------------~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~v~~~~~~~~~--~~~~~~l~~~l~~~ 204 (335)
T 2zbw_A 148 AE---F---------------QGKRVLIVGGGDSAVDWALNLLDTARR---ITLIHRRPQFRAH--EASVKELMKAHEEG 204 (335)
T ss_dssp GG---G---------------TTCEEEEECSSHHHHHHHHHTTTTSSE---EEEECSSSSCCSC--HHHHHHHHHHHHTT
T ss_pred hh---c---------------CCCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEcCCccCcc--HHHHHHHHhccccC
Confidence 11 0 168999999999999999999887665 9999998876542 45667788888889
Q ss_pred CcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCC
Q 010827 302 KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPP 381 (500)
Q Consensus 302 gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~ 381 (500)
||++++++.+++++.++.. ..+.++.. ..++.+++++|.||+|+|++|+.++++.+
T Consensus 205 gv~v~~~~~v~~i~~~~~~---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 260 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERV---------------------RWAVVFHN---QTQEELALEVDAVLILAGYITKLGPLANW 260 (335)
T ss_dssp SSEEETTEEEEEEEESSSE---------------------EEEEEEET---TTCCEEEEECSEEEECCCEEEECGGGGGS
T ss_pred CeEEecCCcceeEccCCCe---------------------eEEEEEEC---CCCceEEEecCEEEEeecCCCCchHhhhc
Confidence 9999999999999874310 13444321 01233689999999999999998887654
Q ss_pred CCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecC
Q 010827 382 NNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 461 (500)
Q Consensus 382 ~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~ 461 (500)
+ ++++ +|++.||+++|| +.|+||++|||+..+. .++++..|+.||+.+|.+|.+.+.+++..++.|..
T Consensus 261 ~-----~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~ 328 (335)
T 2zbw_A 261 G-----LALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPG-----KLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSS 328 (335)
T ss_dssp C-----CCEE-TTEEECCTTCBC-SSTTEEECSTTEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCGG
T ss_pred c-----eecc-CCeeeeCCCCCC-CCCCEEEeccccccCc-----chhhhhhhHHHHHHHHHHHHHHhhhhhccCCcccc
Confidence 4 5555 789999999998 9999999999997521 15789999999999999999999988777776654
No 43
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=3.5e-36 Score=314.67 Aligned_cols=288 Identities=18% Similarity=0.243 Sum_probs=218.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCeEEEEc--------CCCCcccCcch----h---------------hh-
Q 010827 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVD--------QSERFVFKPML----Y---------------EL- 129 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie--------~~~~~~~~~~~----~---------------~~- 129 (500)
.+||+||||||||++||..|++ . |++|+||| +.+.++..... + ..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhc------CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 4899999999999999999998 4 78999999 23333221100 0 00
Q ss_pred ccc--------cccCcccc-----------ccHHHHhccC-CcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcC---C
Q 010827 130 LSG--------EVDAWEIA-----------PRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE---S 186 (500)
Q Consensus 130 ~~g--------~~~~~~~~-----------~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~ 186 (500)
..+ ..+...+. ..+...+++. +++++.+++..++.. ++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~---------------~v~v~~~~~ 145 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKN---------------VVVVRETAD 145 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETT---------------EEEEESSSS
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCC---------------EEEEeecCC
Confidence 000 00111111 1123344566 899999988877542 34443 3
Q ss_pred -----ccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHH
Q 010827 187 -----GLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAA 261 (500)
Q Consensus 187 -----g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~ 261 (500)
+..+.||+||||||++|..|++||.+ . +.+.+++..+. ..+++++|||+|.+|+|+|.
T Consensus 146 ~~~~~~~~~~~d~lViATGs~p~~p~i~G~~-~---~~~~~~~~~~~-------------~~~~~vvViGgG~ig~E~A~ 208 (495)
T 2wpf_A 146 PKSAVKERLQADHILLATGSWPQMPAIPGIE-H---CISSNEAFYLP-------------EPPRRVLTVGGGFISVEFAG 208 (495)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCCTTGG-G---CEEHHHHTTCS-------------SCCSEEEEECSSHHHHHHHH
T ss_pred ccCCCCeEEEcCEEEEeCCCCcCCCCCCCcc-c---cccHHHHHhhh-------------hcCCeEEEECCCHHHHHHHH
Confidence 66899999999999999999999863 2 23344433221 12689999999999999999
Q ss_pred HHHHH---HhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccc
Q 010827 262 TVSER---LEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAAD 338 (500)
Q Consensus 262 ~l~~~---~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
.|++. +.+ |+++++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.+++
T Consensus 209 ~l~~~~~~g~~---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~------------------- 266 (495)
T 2wpf_A 209 IFNAYKPPGGK---VTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTD------------------- 266 (495)
T ss_dssp HHHHHCCTTCE---EEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT-------------------
T ss_pred HHHhhCCCCCe---EEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-------------------
Confidence 99998 766 99999999999999999999999999999999999999999987531
Q ss_pred cCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEeccccc
Q 010827 339 KNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA 418 (500)
Q Consensus 339 ~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~ 418 (500)
+.+.+.+. +++++++|.||+|+|++|+.+++.. +..+++++++|+|.||+++|| +.|+|||+|||+.
T Consensus 267 ---~~~~v~~~------~G~~i~~D~vv~a~G~~p~~~~L~l---~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 267 ---GSKHVTFE------SGKTLDVDVVMMAIGRIPRTNDLQL---GNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD 333 (495)
T ss_dssp ---SCEEEEET------TSCEEEESEEEECSCEEECCGGGTG---GGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC
T ss_pred ---ceEEEEEC------CCcEEEcCEEEECCCCcccccccch---hhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 23445542 5568999999999999999874321 123578888999999999999 9999999999997
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010827 419 LRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 419 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
. +.++..|..||+.+|.+|.+
T Consensus 334 ~--------~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 334 R--------LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp S--------CCCHHHHHHHHHHHHHHHHS
T ss_pred C--------ccCHHHHHHHHHHHHHHhcC
Confidence 5 57889999999999999975
No 44
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.1e-36 Score=312.63 Aligned_cols=288 Identities=17% Similarity=0.195 Sum_probs=219.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCeEEEEcC--------CCCcccCcch----hh---------------hc
Q 010827 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQ--------SERFVFKPML----YE---------------LL 130 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie~--------~~~~~~~~~~----~~---------------~~ 130 (500)
.+||+||||||+|++||.+|++ . |++|+|||+ .+.++..... +. ..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~ 76 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH------KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESA 76 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGG
T ss_pred cccEEEECCCHHHHHHHHHHHHHc------CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHH
Confidence 4799999999999999999998 4 789999992 3333221100 00 00
Q ss_pred -ccc--------ccCccc-----------cccHHHHhccC-CcEEEEeeEEEEecCCCCCCCCCceeecCcEEEc-----
Q 010827 131 -SGE--------VDAWEI-----------APRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL----- 184 (500)
Q Consensus 131 -~g~--------~~~~~~-----------~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~----- 184 (500)
.|. .+...+ ...+...+++. +++++.+++..++.. ++..
T Consensus 77 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~---------------~v~v~~~~~ 141 (490)
T 1fec_A 77 GFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNH---------------TVLVRESAD 141 (490)
T ss_dssp GGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETT---------------EEEEESSSS
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCC---------------EEEEEeecc
Confidence 000 011111 11233445667 999999988888643 2333
Q ss_pred CCc---cEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHH
Q 010827 185 ESG---LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAA 261 (500)
Q Consensus 185 ~~g---~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~ 261 (500)
.++ ..+.||+||||||++|..|++||.+ . +.+.+++..+. ..+++++|||+|.+|+|+|.
T Consensus 142 ~~g~~~~~~~~d~lviAtGs~p~~p~i~g~~-~---~~~~~~~~~~~-------------~~~~~vvViGgG~ig~E~A~ 204 (490)
T 1fec_A 142 PNSAVLETLDTEYILLATGSWPQHLGIEGDD-L---CITSNEAFYLD-------------EAPKRALCVGGGYISIEFAG 204 (490)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCSBTGG-G---CBCHHHHTTCS-------------SCCSEEEEECSSHHHHHHHH
T ss_pred CCCCceEEEEcCEEEEeCCCCCCCCCCCCcc-c---eecHHHHhhhh-------------hcCCeEEEECCCHHHHHHHH
Confidence 245 6899999999999999999999863 2 23444443322 12689999999999999999
Q ss_pred HHHHH---HhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccc
Q 010827 262 TVSER---LEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAAD 338 (500)
Q Consensus 262 ~l~~~---~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
.|++. +.+ |+++++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.+++
T Consensus 205 ~l~~~~~~g~~---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~------------------- 262 (490)
T 1fec_A 205 IFNAYKARGGQ---VDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNAD------------------- 262 (490)
T ss_dssp HHHHHSCTTCE---EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-------------------
T ss_pred HHHhhccCcCe---EEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-------------------
Confidence 99998 766 99999999999999999999999999999999999999999987531
Q ss_pred cCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEeccccc
Q 010827 339 KNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA 418 (500)
Q Consensus 339 ~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~ 418 (500)
+.+.+.+. +++++++|.||+|+|++|+.+++.. +..+++++++|+|.||+++|| +.|+|||+|||+.
T Consensus 263 ---~~~~v~~~------~G~~i~~D~vv~a~G~~p~~~~L~l---~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~ 329 (490)
T 1fec_A 263 ---GTRHVVFE------SGAEADYDVVMLAIGRVPRSQTLQL---EKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD 329 (490)
T ss_dssp ---SCEEEEET------TSCEEEESEEEECSCEEESCTTSCG---GGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred ---CEEEEEEC------CCcEEEcCEEEEccCCCcCccccCc---hhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 23455542 5568999999999999999874411 123588888999999999999 9999999999997
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010827 419 LRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 419 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
. +.++..|..||+.+|.+|.+
T Consensus 330 ~--------~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 330 R--------VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp S--------CCCHHHHHHHHHHHHHHHHS
T ss_pred C--------ccCHHHHHHHHHHHHHHhcC
Confidence 5 67899999999999999975
No 45
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=5.6e-36 Score=296.67 Aligned_cols=300 Identities=19% Similarity=0.182 Sum_probs=215.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhh---hccc---cccCccccccHHHHhccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLANT 150 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~---~~~g---~~~~~~~~~~~~~~~~~~ 150 (500)
...++|+||||||||+++|..|++ .|++|+|||++. ++....... ...+ ......+...+.+.+++.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 78 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGR------AQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKF 78 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHT
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------cCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 345899999999999999999999 689999999983 222111100 0011 112223444566667778
Q ss_pred CcEEEEeeEEEEecC--CCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCChHHHHHH
Q 010827 151 GVQFFKDRVKLLCPS--DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTLEDACRV 227 (500)
Q Consensus 151 ~v~~~~~~v~~i~~~--~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~~~~~~~ 227 (500)
+++++.+++..++.. .+. .+.+.+.++..+.||+||+|||+.|..|.+||.+.+... +......
T Consensus 79 gv~~~~~~v~~i~~~~~~~~----------~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~--- 145 (325)
T 2q7v_A 79 GAKVEMDEVQGVQHDATSHP----------YPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATC--- 145 (325)
T ss_dssp TCEEEECCEEEEEECTTSSS----------CCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH---
T ss_pred CCEEEeeeEEEEEeccCCCc----------eEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccC---
Confidence 999988899988865 320 025666677889999999999999999999987542111 1111110
Q ss_pred HHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHH-hCCcEEE
Q 010827 228 DRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS-ARKVQLV 306 (500)
Q Consensus 228 ~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~-~~gV~i~ 306 (500)
.... ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.. . ..+.+.+. +.||+++
T Consensus 146 ~~~~----------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~--~----~~~~~~l~~~~gv~i~ 206 (325)
T 2q7v_A 146 DGFF----------YKGKKVVVIGGGDAAVEEGMFLTKFADE---VTVIHRRDTLRA--N----KVAQARAFANPKMKFI 206 (325)
T ss_dssp HGGG----------GTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSSCCS--C----HHHHHHHHTCTTEEEE
T ss_pred CHHH----------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeCCCcCCc--c----hHHHHHHHhcCCceEe
Confidence 0000 1158999999999999999999887765 999999876532 1 23334444 4699999
Q ss_pred cCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccC
Q 010827 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (500)
Q Consensus 307 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~ 386 (500)
+++.++++..++.. .++.++.. ..++..++++|.||+|+|++|+.++++.+
T Consensus 207 ~~~~v~~i~~~~~v---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~----- 257 (325)
T 2q7v_A 207 WDTAVEEIQGADSV---------------------SGVKLRNL---KTGEVSELATDGVFIFIGHVPNTAFVKDT----- 257 (325)
T ss_dssp CSEEEEEEEESSSE---------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTTT-----
T ss_pred cCCceEEEccCCcE---------------------EEEEEEEC---CCCcEEEEEcCEEEEccCCCCChHHHhhh-----
Confidence 99999999874310 14455421 11233589999999999999998887642
Q ss_pred CCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 387 ~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
++++++|+|.||++++| +.|+||++|||+..+ ++.+..|+.||+.+|.+|.+.+.+++
T Consensus 258 -~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 315 (325)
T 2q7v_A 258 -VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI-------YRQLATSVGAGTRAAMMTERQLAALE 315 (325)
T ss_dssp -SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -cccCCCccEecCCCCcc-CCCCEEEeecccCcc-------HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55778899999999998 999999999999852 57899999999999999999987654
No 46
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.3e-36 Score=315.42 Aligned_cols=297 Identities=16% Similarity=0.196 Sum_probs=223.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc----------hh-----hhc-----ccc---
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LY-----ELL-----SGE--- 133 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~----------~~-----~~~-----~g~--- 133 (500)
+..+||+||||||||++||..|++ .|++|+|||++. ++.... +. ..+ .+.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~------~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~ 90 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAE------LGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC 90 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC
Confidence 346899999999999999999999 689999999874 221100 00 000 000
Q ss_pred ---ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeC
Q 010827 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199 (500)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAt 199 (500)
.+... +...+...++..+++++.+++..++.... .+. .++..+.||+|||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~-~~g~~~~~d~lviAt 156 (478)
T 3dk9_A 91 EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKP-------------TIE-VSGKKYTAPHILIAT 156 (478)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSC-------------EEE-ETTEEEECSCEEECC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeE-------------EEE-ECCEEEEeeEEEEcc
Confidence 00000 11123344556789999998877765433 455 356689999999999
Q ss_pred CCCCCCC---CCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEE
Q 010827 200 GAEPKLD---VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (500)
Q Consensus 200 G~~p~~~---~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv 276 (500)
|+.|..| ++||.+ ...+.++...+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++
T Consensus 157 G~~p~~p~~~~i~G~~----~~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv 216 (478)
T 3dk9_A 157 GGMPSTPHESQIPGAS----LGITSDGFFQLEE-------------LPGRSVIVGAGYIAVEMAGILSALGSK---TSLM 216 (478)
T ss_dssp CEEECCCCTTTSTTGG----GSBCHHHHTTCCS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCCCCCcCCCCCCc----eeEchHHhhchhh-------------cCccEEEECCCHHHHHHHHHHHHcCCe---EEEE
Confidence 9999998 899965 1233444333222 268999999999999999999998876 9999
Q ss_pred ecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCc-ceeEeecccccCC
Q 010827 277 NVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD-KYILELQPAIKGL 355 (500)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~l~~~~~~~~~ 355 (500)
++.+.+++.+++.+.+.+.+.|++.||++++++.+++++.+++ + .+.+.+.+...+.
T Consensus 217 ~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~~v~~~~~~~g~ 274 (478)
T 3dk9_A 217 IRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS----------------------GLEVSMVTAVPGRLP 274 (478)
T ss_dssp CSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS----------------------SEEEEEEECCTTSCC
T ss_pred EeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEEEccCCCCc
Confidence 9999999999999999999999999999999999999986541 2 3455543211110
Q ss_pred -CccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHH
Q 010827 356 -ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVA 434 (500)
Q Consensus 356 -~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A 434 (500)
++.++++|.||+|+|++|+.+.+... ..+++++++|+|.||+++|| +.|+|||+|||+.. +..+..|
T Consensus 275 ~~g~~~~~D~vi~a~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A 342 (478)
T 3dk9_A 275 VMTMIPDVDCLLWAIGRVPNTKDLSLN---KLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCGK--------ALLTPVA 342 (478)
T ss_dssp EEEEEEEESEEEECSCEEESCTTSCGG---GGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGCS--------SCCHHHH
T ss_pred ccceEEEcCEEEEeeccccCCCCCCch---hcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCCC--------CccHhHH
Confidence 13689999999999999998754211 23588889999999999999 99999999999965 6789999
Q ss_pred HHHHHHHHHHHHHH
Q 010827 435 FQQADFAGWNLWAA 448 (500)
Q Consensus 435 ~~~g~~aa~~i~~~ 448 (500)
..||+.+|.+|.+.
T Consensus 343 ~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 343 IAAGRKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999864
No 47
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.6e-36 Score=316.80 Aligned_cols=291 Identities=19% Similarity=0.227 Sum_probs=218.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc----------chh---------hhc-ccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLY---------ELL-SGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~----------~~~---------~~~-~g~----- 133 (500)
.+||+|||||+||+++|..|++ .|++|+|||+++.++... ++. ... .|.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~ 79 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD------EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEP 79 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 4799999999999999999999 689999999976543211 000 000 000
Q ss_pred -ccCcccc-----------ccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc------------cE
Q 010827 134 -VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG------------LI 189 (500)
Q Consensus 134 -~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g------------~~ 189 (500)
.+...+. ..+...+++.+++++.++...++.. . ..+...++ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~-~------------v~v~~~~g~~~~~~~~~g~~~~ 146 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPH-H------------LEVSLTAGDAYEQAAPTGEKKI 146 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETT-E------------EEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCC-E------------EEEEecCCcccccccccCcceE
Confidence 0011111 1123455667899998876555432 1 13433344 57
Q ss_pred EEecEEEEeCCCCCCCCC-CCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHh
Q 010827 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (500)
Q Consensus 190 ~~~d~lIlAtG~~p~~~~-i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~ 268 (500)
+.||+||+|||+.|..|+ ++. +. .+.+.+++..+.. .+++++|||+|.+|+|+|..|++.+.
T Consensus 147 i~ad~lViAtGs~p~~~~~i~~-~~---~v~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~G~ 209 (482)
T 1ojt_A 147 VAFKNCIIAAGSRVTKLPFIPE-DP---RIIDSSGALALKE-------------VPGKLLIIGGGIIGLEMGTVYSTLGS 209 (482)
T ss_dssp EEEEEEEECCCEEECCCSSCCC-CT---TEECHHHHTTCCC-------------CCSEEEEESCSHHHHHHHHHHHHHTC
T ss_pred EEcCEEEECCCCCCCCCCCCCc-cC---cEEcHHHHhcccc-------------cCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999998777 662 22 2345555443321 27899999999999999999999887
Q ss_pred hcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEee
Q 010827 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (500)
Q Consensus 269 ~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 348 (500)
+ |+++++.+.+++.+++++.+.+.+.|++.||++++++.|++++.++ +.+.+.+
T Consensus 210 ~---Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~ 263 (482)
T 1ojt_A 210 R---LDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-----------------------DGVYVTF 263 (482)
T ss_dssp E---EEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET-----------------------TEEEEEE
T ss_pred e---EEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-----------------------CeEEEEE
Confidence 7 9999999999999999999999999999999999999999998754 3444544
Q ss_pred cccccCCCccEEeecEEEEecCCCCCCCCC--CCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCC
Q 010827 349 QPAIKGLESQIFEADLVLWTVGSKPLLPHV--EPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP 426 (500)
Q Consensus 349 ~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~--~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~ 426 (500)
.+ .+++++++++|.||+|+|++|+.+++ +.. +++++++|+|.||+++|| +.|+|||+|||+..
T Consensus 264 ~~--~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~-----gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~------- 328 (482)
T 1ojt_A 264 EG--ANAPKEPQRYDAVLVAAGRAPNGKLISAEKA-----GVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ------- 328 (482)
T ss_dssp ES--SSCCSSCEEESCEEECCCEEECGGGTTGGGT-----TCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS-------
T ss_pred ec--cCCCceEEEcCEEEECcCCCcCCCCCChhhc-----CceeCCCCCEeeCCCccc-CCCCEEEEEcccCC-------
Confidence 31 01125678999999999999998874 333 578888899999999999 99999999999986
Q ss_pred CCchHHHHHHHHHHHHHHHHH
Q 010827 427 LPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 427 ~~~~~~~A~~~g~~aa~~i~~ 447 (500)
+.++..|..||+.+|.+|.+
T Consensus 329 -~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 329 -PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp -SCCHHHHHHHHHHHHHHHTT
T ss_pred -CccHHHHHHHHHHHHHHHcC
Confidence 67888999999999999985
No 48
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4.6e-36 Score=311.43 Aligned_cols=285 Identities=22% Similarity=0.308 Sum_probs=219.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc----------hh-----hhc-----ccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LY-----ELL-----SGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~----------~~-----~~~-----~g~----- 133 (500)
.+||+|||||++|+++|..|++ .|++|+|||++. ++.... +. ..+ .+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~ 76 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA------FGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGG 76 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC--
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCC
Confidence 5899999999999999999999 689999999984 221100 00 000 010
Q ss_pred -ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCC
Q 010827 134 -VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA 201 (500)
Q Consensus 134 -~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~ 201 (500)
.+... +...+...+++.+++++.+++..++.. .+.+ ++..+.||+||+|||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 77 TLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAH---------------TIEV-EGQRLSADHIVIATGG 140 (463)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEE-TTEEEEEEEEEECCCE
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCC---------------EEEE-CCEEEEcCEEEECCCC
Confidence 00000 111123344567899999887776532 4555 5668999999999999
Q ss_pred CCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 202 EPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 202 ~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
+|..|++||.+ . +.+..++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.
T Consensus 141 ~p~~p~i~G~~-~---~~~~~~~~~~~~-------------~~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~~ 200 (463)
T 2r9z_A 141 RPIVPRLPGAE-L---GITSDGFFALQQ-------------QPKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALEDR 200 (463)
T ss_dssp EECCCSCTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CCCCCCCCCcc-c---eecHHHHhhhhc-------------cCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCc
Confidence 99999999863 2 234444433221 268999999999999999999988776 999999999
Q ss_pred cCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCcc-EE
Q 010827 282 ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ-IF 360 (500)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~-~l 360 (500)
+++.+++...+.+.+.+++.||++++++.|++++.++ +++.+.+. +++ ++
T Consensus 201 ~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~G~~~i 251 (463)
T 2r9z_A 201 LLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDA-----------------------QGTTLVAQ------DGTRLE 251 (463)
T ss_dssp SSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEET-----------------------TEEEEEET------TCCEEE
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEe------CCcEEE
Confidence 9998999999999999999999999999999998644 34555543 556 89
Q ss_pred eecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHH
Q 010827 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (500)
Q Consensus 361 ~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~ 440 (500)
++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +..+..|..||+.
T Consensus 252 ~~D~vv~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~ 319 (463)
T 2r9z_A 252 GFDSVIWAVGRAPNTRDLGLE---AAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGR--------DQLTPVAIAAGRR 319 (463)
T ss_dssp EESEEEECSCEEESCTTSCHH---HHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHHH
T ss_pred EcCEEEECCCCCcCCCCCCch---hcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCC--------cccHHHHHHHHHH
Confidence 999999999999998754210 22577888999999999998 99999999999875 6788899999999
Q ss_pred HHHHHHH
Q 010827 441 AGWNLWA 447 (500)
Q Consensus 441 aa~~i~~ 447 (500)
+|.+|.+
T Consensus 320 aa~~i~g 326 (463)
T 2r9z_A 320 LAERLFD 326 (463)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 9999975
No 49
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5e-36 Score=295.33 Aligned_cols=295 Identities=17% Similarity=0.159 Sum_probs=204.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc----hhhhcc-ccccCccccccHHHHhccCCcE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----LYELLS-GEVDAWEIAPRFADLLANTGVQ 153 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~----~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ 153 (500)
.+||+|||||||||+||.+|++ .|++|+|||+... ..... .+.++. ......++.........+....
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~------~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASR------ANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAV 78 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhcccc
Confidence 4899999999999999999999 6899999998642 21111 111110 0111122233334445555666
Q ss_pred EEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHH
Q 010827 154 FFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (500)
Q Consensus 154 ~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~ 232 (500)
+... .+...+.... .....++.++.||+||||||++|+.|++||.++................
T Consensus 79 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~--- 142 (312)
T 4gcm_A 79 YQYGDIKSVEDKGEY-------------KVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAF--- 142 (312)
T ss_dssp EEECCCCEEEECSSC-------------EEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGG---
T ss_pred ccceeeeeeeeeecc-------------eeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccc---
Confidence 6655 3333333222 3555667799999999999999999999997643211111111111100
Q ss_pred HHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 233 ~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
..+|+|+|||||++|+|+|..|++.+.+ ||++++.+.+++. .....+.+++.++.+.....+.
T Consensus 143 ---------~~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
T 4gcm_A 143 ---------FKNKRLFVIGGGDSAVEEGTFLTKFADK---VTIVHRRDELRAQ-----RILQDRAFKNDKIDFIWSHTLK 205 (312)
T ss_dssp ---------GTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSSCCSC-----HHHHHHHHHCTTEEEECSEEEE
T ss_pred ---------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEecccccCcc-----hhHHHHHHHhcCcceeeeccee
Confidence 0168999999999999999999988877 9999998877542 2233456778889998887777
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~ 392 (500)
.+...+... ....... ...++...+++|.|++++|.+|+..++...+ + .++
T Consensus 206 ~~~~~~~~~--------------------~~~~~~~---~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g-----~-~~~ 256 (312)
T 4gcm_A 206 SINEKDGKV--------------------GSVTLTS---TKDGSEETHEADGVFIYIGMKPLTAPFKDLG-----I-TND 256 (312)
T ss_dssp EEEEETTEE--------------------EEEEEEE---TTTCCEEEEECSEEEECSCEEESCGGGGGGT-----C-BCT
T ss_pred eeecccccc--------------------ccceeee---ecCCceeEEeeeeEEeecCCCcCchhHHhcc-----e-ecC
Confidence 665533111 1111111 1233667899999999999999988876654 2 567
Q ss_pred CCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
+|+|.||+++|| +.|+|||+|||+... ++++..|+.||+.||.+|.++|+
T Consensus 257 ~G~I~vd~~~~T-s~pgIyA~GDv~~~~-------~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 257 VGYIVTKDDMTT-SVPGIFAAGDVRDKG-------LRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp TSCBCCCTTSBC-SSTTEEECSTTBSCS-------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEeeCCCCcc-CCCCEEEEeecCCCc-------chHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999 999999999998741 57889999999999999998875
No 50
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.8e-36 Score=300.00 Aligned_cols=303 Identities=16% Similarity=0.142 Sum_probs=220.5
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC----CcccCcchh----hh--ccccccCccccccHHH
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE----RFVFKPMLY----EL--LSGEVDAWEIAPRFAD 145 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~----~~~~~~~~~----~~--~~g~~~~~~~~~~~~~ 145 (500)
..+++||+|||||++||++|..|++ .|++|+|||+.+ ......... .+ +........+...+..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLAR------AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMRE 92 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHH
Confidence 3456899999999999999999999 689999999965 222111110 00 0111122345556677
Q ss_pred HhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEc---CCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCCh
Q 010827 146 LLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTL 221 (500)
Q Consensus 146 ~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~ 221 (500)
.+++.+++++.+++..++...+. +.+.+ +++..+.||+||+|||+.|..|.+||.+.+... +...
T Consensus 93 ~~~~~gv~i~~~~v~~i~~~~~~-----------~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~ 161 (338)
T 3itj_A 93 QSTKFGTEIITETVSKVDLSSKP-----------FKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISAC 161 (338)
T ss_dssp HHHHTTCEEECSCEEEEECSSSS-----------EEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESC
T ss_pred HHHHcCCEEEEeEEEEEEEcCCE-----------EEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEc
Confidence 77788999999889999876552 34444 366789999999999999999999996532111 1111
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhC
Q 010827 222 EDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSAR 301 (500)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (500)
.. ....+. ...+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.. ...+.+.+.+.
T Consensus 162 ~~---~~~~~~--------~~~~~~v~vvG~G~~g~e~a~~l~~~g~~---v~~v~~~~~~~~------~~~~~~~l~~~ 221 (338)
T 3itj_A 162 AV---CDGAVP--------IFRNKPLAVIGGGDSACEEAQFLTKYGSK---VFMLVRKDHLRA------STIMQKRAEKN 221 (338)
T ss_dssp HH---HHTTSG--------GGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCCS------CHHHHHHHHHC
T ss_pred hh---cccchh--------hcCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCccCC------CHHHHHHHHhc
Confidence 11 111100 01168999999999999999999988766 999999887644 34455666555
Q ss_pred -CcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCC
Q 010827 302 -KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEP 380 (500)
Q Consensus 302 -gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~ 380 (500)
||++++++.+++++.+++.. ..++++. . ..++++++++|.||+|+|++|+.+++..
T Consensus 222 ~gv~i~~~~~v~~i~~~~~~~--------------------~~v~~~~--~-~~g~~~~i~~D~vi~a~G~~p~~~~~~~ 278 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDGKLL--------------------NALRIKN--T-KKNEETDLPVSGLFYAIGHTPATKIVAG 278 (338)
T ss_dssp TTEEEECSEEEEEEEESSSSE--------------------EEEEEEE--T-TTTEEEEEECSEEEECSCEEECCGGGBT
T ss_pred CCeEEeecceeEEEEcccCcE--------------------EEEEEEE--C-CCCceEEEEeCEEEEEeCCCCChhHhhC
Confidence 99999999999998755211 1244441 1 1224578999999999999999888764
Q ss_pred CCCccCCCCCCCCCceEe-CCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCC
Q 010827 381 PNNRLHDLPLNARGQAET-DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (500)
Q Consensus 381 ~~~~~~~~~~~~~g~i~v-d~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 452 (500)
+++++++|++.+ |..+++ +.|+||++|||+... ++.+..|+.+|+.||.+|...|.++
T Consensus 279 ------~l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 279 ------QVDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDSK-------YRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp ------TBCBCTTSCBCCCTTSSBC-SSTTEEECGGGGCSS-------CCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ------ceEecCCCcEEEcCccccc-CCCCEEEeeccCCCC-------ccceeeehhhhHHHHHHHHHHHhcC
Confidence 478888999995 788888 999999999999741 6789999999999999999999865
No 51
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.7e-36 Score=314.93 Aligned_cols=291 Identities=24% Similarity=0.292 Sum_probs=218.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hh-----cccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----EL-----LSGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~-----~~g~----- 133 (500)
.+||+||||||||++||..|++ .|++|+|||+++ ++.. | ++. .. ..|.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~------~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 78 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ------LGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPE 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCE
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCC
Confidence 4899999999999999999999 688999999986 2211 0 000 00 0000
Q ss_pred ccCccccc-----------cHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCC
Q 010827 134 VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE 202 (500)
Q Consensus 134 ~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~ 202 (500)
.+...+.. .+..++++.+++++.+++..++.. ++.+. +..+.||+||+|||++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~---------------~v~v~-g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 79 LDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPK---------------EVEVG-GERYGAKSLILATGSE 142 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEET-TEEEEEEEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCC---------------EEEEc-cEEEEeCEEEEcCCCC
Confidence 01111110 123455667999999877666532 45554 5689999999999999
Q ss_pred CCCCC-CCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 203 PKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 203 p~~~~-i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
|..|+ +++. . .+.+.+++..+... .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.
T Consensus 143 p~~p~gi~~~-~---~v~~~~~~~~l~~~------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~ 203 (464)
T 2eq6_A 143 PLELKGFPFG-E---DVWDSTRALKVEEG------------LPKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPE 203 (464)
T ss_dssp ECCBTTBCCS-S---SEECHHHHTCGGGC------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CCCCCCCCCC-C---cEEcHHHHHhhhhh------------cCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCc
Confidence 98876 7762 2 23455555443321 168999999999999999999988776 999999999
Q ss_pred cCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEe
Q 010827 282 ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE 361 (500)
Q Consensus 282 ~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~ 361 (500)
+++.+++.+.+.+.+.+++.||++++++.|++++.++ +.+.+.+.+. .+++..+++
T Consensus 204 ~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~~~~-~~g~~~~i~ 259 (464)
T 2eq6_A 204 ILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKK-----------------------DGLHVRLEPA-EGGEGEEVV 259 (464)
T ss_dssp SSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEET-TCCSCEEEE
T ss_pred cccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-----------------------CEEEEEEeec-CCCceeEEE
Confidence 9998899999999999999999999999999998754 4455554210 001223899
Q ss_pred ecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHH
Q 010827 362 ADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 441 (500)
Q Consensus 362 ~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~a 441 (500)
+|.||+|+|++|+.+++.. +..+++++++|+|.||+++|| +.|+|||+|||+.. +.+...|..||+.+
T Consensus 260 ~D~vv~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~l~~~A~~~g~~a 327 (464)
T 2eq6_A 260 VDKVLVAVGRKPRTEGLGL---EKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARP--------PLLAHKAMREGLIA 327 (464)
T ss_dssp ESEEEECSCEEESCTTSSH---HHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCS--------SCCHHHHHHHHHHH
T ss_pred cCEEEECCCcccCCCCCCh---hhcCceecCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHHH
Confidence 9999999999999886521 123577888899999999999 99999999999986 67888999999999
Q ss_pred HHHHHH
Q 010827 442 GWNLWA 447 (500)
Q Consensus 442 a~~i~~ 447 (500)
|.+|.+
T Consensus 328 a~~i~g 333 (464)
T 2eq6_A 328 AENAAG 333 (464)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 999975
No 52
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=8.4e-36 Score=313.63 Aligned_cols=302 Identities=16% Similarity=0.167 Sum_probs=218.7
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC--------CcccCcch----h-----------hh---
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE--------RFVFKPML----Y-----------EL--- 129 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~--------~~~~~~~~----~-----------~~--- 129 (500)
.+..+||+||||||||++||..|++ .|++|+|||+++ .++..... + ..
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~ 102 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQ------YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQD 102 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHH
Confidence 3456899999999999999999999 689999999954 11111000 0 00
Q ss_pred --ccc-------cccCcccc-----------ccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCcc-
Q 010827 130 --LSG-------EVDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL- 188 (500)
Q Consensus 130 --~~g-------~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~- 188 (500)
..| ..+...+. ..+...++..+++++.+.+..+++... .+...++.
T Consensus 103 ~~~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v-------------~v~~~~g~~ 169 (519)
T 3qfa_A 103 SRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRI-------------KATNNKGKE 169 (519)
T ss_dssp HHHTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCC
T ss_pred HHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEE-------------EEEcCCCCE
Confidence 001 00111111 112234556789999998888876533 45555554
Q ss_pred -EEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHH
Q 010827 189 -IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (500)
Q Consensus 189 -~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~ 267 (500)
.+.||+||||||++|..|++||.++.. .+.+++..+.. .+++++|||+|.+|+|+|..|++.+
T Consensus 170 ~~i~~d~lViATGs~p~~p~i~G~~~~~---~t~~~~~~l~~-------------~~~~vvVIGgG~ig~E~A~~l~~~G 233 (519)
T 3qfa_A 170 KIYSAERFLIATGERPRYLGIPGDKEYC---ISSDDLFSLPY-------------CPGKTLVVGASYVALECAGFLAGIG 233 (519)
T ss_dssp CEEEEEEEEECCCEEECCCCCTTHHHHC---BCHHHHTTCSS-------------CCCSEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEECCEEEEECCCCcCCCCCCCccCce---EcHHHHhhhhh-------------cCCeEEEECCcHHHHHHHHHHHHcC
Confidence 799999999999999999999965432 34444333221 2678999999999999999999987
Q ss_pred hhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEe
Q 010827 268 EEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (500)
Q Consensus 268 ~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 347 (500)
.+ |+++++ ..+++.+++++.+.+.+.|++.||++++++.++++....+.. .+.+.+.
T Consensus 234 ~~---Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~-------------------~~~~~v~ 290 (519)
T 3qfa_A 234 LD---VTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGT-------------------PGRLRVV 290 (519)
T ss_dssp CC---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCT-------------------TCEEEEE
T ss_pred Ce---EEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCC-------------------CceEEEE
Confidence 76 999998 478888999999999999999999999998888876532100 0234443
Q ss_pred ecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC-CCCceEeCCCcccCCCCCEEEecccccccCCCCCC
Q 010827 348 LQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP 426 (500)
Q Consensus 348 ~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~-~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~ 426 (500)
+... .+++..++++|.||+|+|++|+.+++... ..+++++ .+|+|.||+++|| +.|+|||+|||+..
T Consensus 291 ~~~~-~g~~~~~~~~D~vi~a~G~~p~~~~l~l~---~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~g------- 358 (519)
T 3qfa_A 291 AQST-NSEEIIEGEYNTVMLAIGRDACTRKIGLE---TVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILED------- 358 (519)
T ss_dssp EEES-SSSCEEEEEESEEEECSCEEESCSSSCST---TTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBSS-------
T ss_pred EEEC-CCcEEEEEECCEEEEecCCcccCCCCChh---hcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccCC-------
Confidence 2210 11112467899999999999998874311 2357887 6899999999999 99999999999942
Q ss_pred CCchHHHHHHHHHHHHHHHHH
Q 010827 427 LPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 427 ~~~~~~~A~~~g~~aa~~i~~ 447 (500)
.+.++..|..||+.+|.+|.+
T Consensus 359 ~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 359 KVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp SCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccHHHHHHHHHHHHHHHcC
Confidence 167889999999999999985
No 53
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.5e-36 Score=311.18 Aligned_cols=287 Identities=19% Similarity=0.256 Sum_probs=221.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch-------------------hhhc-cc------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML-------------------YELL-SG------ 132 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~-------------------~~~~-~g------ 132 (500)
.+||+||||||+|+++|..|++ .|++|+|||+.. ++..... .... .+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~------~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA------LGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCcEEEECcCHHHHHHHHHHHh------CCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999999 689999999943 2221000 0000 00
Q ss_pred cccCc-----------cccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEc-CCccEEEecEEEEeCC
Q 010827 133 EVDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGLIVEYDWLVLSLG 200 (500)
Q Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~-~~g~~~~~d~lIlAtG 200 (500)
..+.. .+...+..+++..+++++.+++..++.. .+.. +++..+.||+||+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~~~~~~~~~~d~lviAtG 142 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPN---------------TVKLLASGKTVTAERIVIAVG 142 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSS---------------EEEETTTTEEEEEEEEEECCC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC---------------EEEEecCCeEEEeCEEEEecC
Confidence 00100 1112234445566899999987776532 4555 4667899999999999
Q ss_pred CCCC-CCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 201 ~~p~-~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
++|. .|++||.+. +.+.++...+.. .+++++|||+|.+|+|+|..+++.+.+ |+++++.
T Consensus 143 ~~p~~~p~i~G~~~----~~~~~~~~~~~~-------------~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~ 202 (463)
T 4dna_A 143 GHPSPHDALPGHEL----CITSNEAFDLPA-------------LPESILIAGGGYIAVEFANIFHGLGVK---TTLIYRG 202 (463)
T ss_dssp EEECCCTTSTTGGG----CBCHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCcccCCCCCCccc----cccHHHHhhhhc-------------CCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcC
Confidence 9999 999999642 234444333221 278999999999999999999988776 9999999
Q ss_pred CccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEe-ecccccCCCcc
Q 010827 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE-LQPAIKGLESQ 358 (500)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~-~~~~~~~~~~~ 358 (500)
+.+++.+++.+.+.+.+.+++.||++++++.|++++.+++ +.+.+. +. +++
T Consensus 203 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~~------~g~ 254 (463)
T 4dna_A 203 KEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD----------------------GRRVATTMK------HGE 254 (463)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT----------------------SCEEEEESS------SCE
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC----------------------CEEEEEEcC------CCe
Confidence 9999999999999999999999999999999999987542 224454 42 455
Q ss_pred EEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHH
Q 010827 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQA 438 (500)
Q Consensus 359 ~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g 438 (500)
+++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. ++++..|..||
T Consensus 255 -i~aD~Vv~a~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g 321 (463)
T 4dna_A 255 -IVADQVMLALGRMPNTNGLGLE---AAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDR--------VQLTPVAIHEA 321 (463)
T ss_dssp -EEESEEEECSCEEESCTTSSTG---GGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSS--------CCCHHHHHHHH
T ss_pred -EEeCEEEEeeCcccCCCCCCcc---ccCceECCCCCEeECcCCCC-CCCCEEEEEecCCC--------CCChHHHHHHH
Confidence 9999999999999998874211 33688899999999999998 99999999999986 67899999999
Q ss_pred HHHHHHHHHH
Q 010827 439 DFAGWNLWAA 448 (500)
Q Consensus 439 ~~aa~~i~~~ 448 (500)
+.+|.+|.+.
T Consensus 322 ~~aa~~i~g~ 331 (463)
T 4dna_A 322 MCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHcCC
Confidence 9999999853
No 54
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=8e-36 Score=293.68 Aligned_cols=300 Identities=17% Similarity=0.097 Sum_probs=217.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEE-EcCCCCcccCcchhhh---ccc---cccCccccccHHHHhccC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLL-VDQSERFVFKPMLYEL---LSG---EVDAWEIAPRFADLLANT 150 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~l-ie~~~~~~~~~~~~~~---~~g---~~~~~~~~~~~~~~~~~~ 150 (500)
.++||+|||||+|||+||..|++ .|++|+| +|+. .+......... .++ .....++...+..++++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR------GGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRF 75 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------HTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999 6899999 9994 33222111100 111 123345556677888888
Q ss_pred CcEEEEeeEEEEecCC--CCCCCCCceeecCcEE-EcCCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCChHHHHH
Q 010827 151 GVQFFKDRVKLLCPSD--HLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTLEDACR 226 (500)
Q Consensus 151 ~v~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~v-~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~~~~~~ 226 (500)
+++++.+++..+ .+. +. +.+ ...++ .+.||+||+|||+.|..|.+||.+.+... +........
T Consensus 76 ~v~~~~~~v~~i-~~~~~~~-----------~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~ 142 (315)
T 3r9u_A 76 GLKHEMVGVEQI-LKNSDGS-----------FTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDG 142 (315)
T ss_dssp CCEEECCCEEEE-EECTTSC-----------EEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHG
T ss_pred CcEEEEEEEEEE-ecCCCCc-----------EEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccc
Confidence 999998888888 443 21 242 22333 89999999999999999999997642111 111111111
Q ss_pred HHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEE
Q 010827 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV 306 (500)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~ 306 (500)
.. ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+. .....+.+.+++.||+++
T Consensus 143 ~~-------------~~~~~v~viG~g~~~~e~a~~l~~~g~~---v~~~~~~~~~~-----~~~~~~~~~~~~~gv~~~ 201 (315)
T 3r9u_A 143 FF-------------YKNKEVAVLGGGDTALEEALYLANICSK---IYLIHRRDEFR-----AAPSTVEKVKKNEKIELI 201 (315)
T ss_dssp GG-------------GTTSEEEEECCBHHHHHHHHHHHTTSSE---EEEECSSSSCB-----SCHHHHHHHHHCTTEEEE
T ss_pred cc-------------cCcCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCCCCC-----CCHHHHHHHHhcCCeEEE
Confidence 10 0168999999999999999999987665 99999987752 223444566678999999
Q ss_pred cCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccC
Q 010827 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (500)
Q Consensus 307 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~ 386 (500)
+++.+.++..+++.. ..++++. ..++..++++|.||+|+|++|+.+++.... ..
T Consensus 202 ~~~~v~~i~~~~~~~--------------------~~v~~~~----~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~--~~ 255 (315)
T 3r9u_A 202 TSASVDEVYGDKMGV--------------------AGVKVKL----KDGSIRDLNVPGIFTFVGLNVRNEILKQDD--SK 255 (315)
T ss_dssp CSCEEEEEEEETTEE--------------------EEEEEEC----TTSCEEEECCSCEEECSCEEECCGGGBCTT--SC
T ss_pred eCcEEEEEEcCCCcE--------------------EEEEEEc----CCCCeEEeecCeEEEEEcCCCCchhhhccc--cc
Confidence 999999998754111 2355542 112335899999999999999988876521 23
Q ss_pred C-CCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCC
Q 010827 387 D-LPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (500)
Q Consensus 387 ~-~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 452 (500)
+ ++++++|+|.||+++|| +.|+||++|||+... ++.+..|+.||+.+|.+|.+.+.++
T Consensus 256 g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 256 FLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKDA-------PKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp BSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTTC-------CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeecCCCcEEeCCCccc-CCCCEEEeecccCCc-------hhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 4 77888999999999999 999999999998631 6889999999999999999988653
No 55
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-35 Score=311.26 Aligned_cols=291 Identities=19% Similarity=0.278 Sum_probs=209.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hhc-----ccc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL-----SGE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~~-----~g~----- 133 (500)
.+||+||||||||++||..|++ .|++|+|||+++ ++.. | ++. ..+ .+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~ 74 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR------HNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFS 74 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCc
Confidence 4799999999999999999999 689999999985 2111 1 000 000 010
Q ss_pred ccCc-----------cccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcC-------------CccE
Q 010827 134 VDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-------------SGLI 189 (500)
Q Consensus 134 ~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~-------------~g~~ 189 (500)
.+.. .+...+...+++.+++++.+++..++.. .+... ++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~---------------~v~v~~~~~~~~~~~~~~~~~~ 139 (500)
T 1onf_A 75 FNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSEN---------------RILIKGTKDNNNKDNGPLNEEI 139 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------------------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEEeccccccccccCCCceE
Confidence 0110 1111233445667899998866544421 22221 2557
Q ss_pred EEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhh
Q 010827 190 VEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEE 269 (500)
Q Consensus 190 ~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~ 269 (500)
+.||+||+|||++|..|++||.+ . ..+.+++..+ .. +++|+|||+|.+|+|+|..|++.+.+
T Consensus 140 ~~~d~lViAtGs~p~~p~i~G~~-~---~~~~~~~~~~-------------~~-~~~vvViGgG~ig~E~A~~l~~~g~~ 201 (500)
T 1onf_A 140 LEGRNILIAVGNKPVFPPVKGIE-N---TISSDEFFNI-------------KE-SKKIGIVGSGYIAVELINVIKRLGID 201 (500)
T ss_dssp -CBSSEEECCCCCBCCCSCTTGG-G---CEEHHHHTTC-------------CC-CSEEEEECCSHHHHHHHHHHHTTTCE
T ss_pred EEeCEEEECCCCCCCCCCCCCCC-c---ccCHHHHhcc-------------CC-CCeEEEECChHHHHHHHHHHHHcCCe
Confidence 89999999999999999999863 2 2233332211 11 68999999999999999999988776
Q ss_pred cCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeec
Q 010827 270 KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (500)
Q Consensus 270 ~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 349 (500)
|+++++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.+++ +.+.+.+.
T Consensus 202 ---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~ 256 (500)
T 1onf_A 202 ---SYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSD----------------------KNLSIHLS 256 (500)
T ss_dssp ---EEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST----------------------TCEEEEET
T ss_pred ---EEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC----------------------ceEEEEEC
Confidence 99999999999999999999999999999999999999999986431 22455542
Q ss_pred ccccCCCccE-EeecEEEEecCCCCCCCCC--CCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCC----
Q 010827 350 PAIKGLESQI-FEADLVLWTVGSKPLLPHV--EPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS---- 422 (500)
Q Consensus 350 ~~~~~~~~~~-l~~D~vi~a~G~~p~~~~~--~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~---- 422 (500)
++++ +++|.||+|+|++|+.+.+ +.. ++++ ++|+|.||+++|| +.|+|||+|||+..++.
T Consensus 257 ------~g~~~~~~D~vi~a~G~~p~~~~l~~~~~-----g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~ 323 (500)
T 1onf_A 257 ------DGRIYEHFDHVIYCVGRSPDTENLKLEKL-----NVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIE 323 (500)
T ss_dssp ------TSCEEEEESEEEECCCBCCTTTTSSCTTT-----TCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC------
T ss_pred ------CCcEEEECCEEEECCCCCcCCCCCCchhc-----Cccc-cCCEEEECCCccc-CCCCEEEEecccccccccccc
Confidence 4555 9999999999999998643 443 4777 7899999999998 99999999999943210
Q ss_pred --------------------CC--CCCCchHHHHHHHHHHHHHHHHH
Q 010827 423 --------------------SG--RPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 423 --------------------~~--~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
.+ ...+.++..|..||+.+|.+|.+
T Consensus 324 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 324 DLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp ------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 00 02367899999999999999985
No 56
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.3e-35 Score=291.55 Aligned_cols=298 Identities=20% Similarity=0.159 Sum_probs=214.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhh---hccc--cccCccccccHHHHhccCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG--EVDAWEIAPRFADLLANTGV 152 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~~~~v 152 (500)
..+||+||||||+|+++|..|++ .|++|+|||+.. ......... ..++ ......+...+.+.+++.++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 87 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAAR------SGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAK 87 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSE
T ss_pred CCCcEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCC
Confidence 34799999999999999999999 689999999953 221111000 0111 11122334445566777789
Q ss_pred EEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-CCCChHHHHHHHHHH
Q 010827 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (500)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~~~~~~~~~~~~~~l 231 (500)
+++..++..++...+. +.+.+ ++..+.||+||+|||+.|..|.+||.+++.. .+...... ....
T Consensus 88 ~~~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~~~ 152 (319)
T 3cty_A 88 IREGVEVRSIKKTQGG-----------FDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC---DGYL 152 (319)
T ss_dssp EEETCCEEEEEEETTE-----------EEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH---HGGG
T ss_pred EEEEeeEEEEEEeCCE-----------EEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec---chhh
Confidence 9888888888764431 24555 4568999999999999999998988643211 11111110 0000
Q ss_pred HHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceE
Q 010827 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 232 ~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.. ...+.+.+++.||++++++.+
T Consensus 153 ----------~~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~i~~~~~~~~------~~~l~~~l~~~gv~i~~~~~v 213 (319)
T 3cty_A 153 ----------FKGKRVVTIGGGNSGAIAAISMSEYVKN---VTIIEYMPKYMC------ENAYVQEIKKRNIPYIMNAQV 213 (319)
T ss_dssp ----------GBTSEEEEECCSHHHHHHHHHHTTTBSE---EEEECSSSSCCS------CHHHHHHHHHTTCCEECSEEE
T ss_pred ----------cCCCeEEEECCCHHHHHHHHHHHhhCCc---EEEEEcCCccCC------CHHHHHHHhcCCcEEEcCCeE
Confidence 0157999999999999999999887765 999999776532 234566777899999999999
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~ 391 (500)
+++..+++.. .++.++.. ..++..++++|.||+|+|++|+.+++...+ ++++
T Consensus 214 ~~i~~~~~~v--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g-----l~~~ 265 (319)
T 3cty_A 214 TEIVGDGKKV--------------------TGVKYKDR---TTGEEKLIETDGVFIYVGLIPQTSFLKDSG-----VKLD 265 (319)
T ss_dssp EEEEESSSSE--------------------EEEEEEET---TTCCEEEECCSEEEECCCEEECCGGGTTSC-----CCBC
T ss_pred EEEecCCceE--------------------EEEEEEEc---CCCceEEEecCEEEEeeCCccChHHHhhcc-----cccc
Confidence 9998753100 23444311 012334799999999999999998887543 7788
Q ss_pred CCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCC
Q 010827 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (500)
Q Consensus 392 ~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 452 (500)
++|+|.||++++| +.|+||++|||+..+ ++.+..|+.||+.+|.+|.+.+.++
T Consensus 266 ~~g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 266 ERGYIVVDSRQRT-SVPGVYAAGDVTSGN-------FAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp TTSCBCCCTTCBC-SSTTEEECSTTBTTC-------CCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCccEeCCCCCcc-CCCCEEEeecccCcc-------hhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999998 999999999999852 4688999999999999999999764
No 57
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.7e-36 Score=311.08 Aligned_cols=289 Identities=22% Similarity=0.248 Sum_probs=219.6
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc----------hhh-----hc----ccc------c
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LYE-----LL----SGE------V 134 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~----------~~~-----~~----~g~------~ 134 (500)
+||+||||||||++||..|++ .|++|+|||+++.++.... +.. .+ .|. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~ 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ------LGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVEL 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEE
T ss_pred CCEEEECCChhHHHHHHHHHH------CCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCcc
Confidence 689999999999999999999 6899999999875432110 000 00 000 0
Q ss_pred cCccc-----------cccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCC
Q 010827 135 DAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP 203 (500)
Q Consensus 135 ~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p 203 (500)
+...+ ...+..++++.+++++.+++..++... ..+.+ ++..+.||+||+|||++|
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~-------------~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 76 DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERK-------------VLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSE-------------EEETT-TCCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCe-------------EEEee-CCEEEEecEEEECCCCCC
Confidence 11111 111234555678999998766543321 13444 567899999999999999
Q ss_pred CCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC
Q 010827 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (500)
Q Consensus 204 ~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~ 283 (500)
..|+++|.+.. .+.+.++...+. ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.++
T Consensus 142 ~~~~~~g~~~~--~v~~~~~~~~~~-------------~~~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l 203 (455)
T 2yqu_A 142 LIPPWAQVDYE--RVVTSTEALSFP-------------EVPKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL 203 (455)
T ss_dssp CCCTTBCCCSS--SEECHHHHTCCS-------------SCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred CCCCCCCCCcC--cEechHHhhccc-------------cCCCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc
Confidence 99988886431 233444433221 1268999999999999999999988776 99999999999
Q ss_pred CCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeec
Q 010827 284 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 363 (500)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D 363 (500)
+.+++.+.+.+.+.+++.||+++++++|++++.++ +.+.+++. +++++++|
T Consensus 204 ~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~i~~D 254 (455)
T 2yqu_A 204 PTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-----------------------KGARVELE------GGEVLEAD 254 (455)
T ss_dssp TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEES
T ss_pred cccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-----------------------CEEEEEEC------CCeEEEcC
Confidence 98899999999999999999999999999998754 45666542 56789999
Q ss_pred EEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHH
Q 010827 364 LVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGW 443 (500)
Q Consensus 364 ~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~ 443 (500)
.||+|+|.+|+.+++.. +..+++++++|++.||+++|+ +.|+||++|||+.. +..+..|..||+.+|.
T Consensus 255 ~vv~A~G~~p~~~~l~~---~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g~~aa~ 322 (455)
T 2yqu_A 255 RVLVAVGRRPYTEGLSL---ENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG--------PMLAHKASEEGIAAVE 322 (455)
T ss_dssp EEEECSCEEECCTTCCG---GGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHH
T ss_pred EEEECcCCCcCCCCCCh---hhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC--------ccCHHHHHHhHHHHHH
Confidence 99999999999877421 123577788899999999998 89999999999986 6788899999999999
Q ss_pred HHHH
Q 010827 444 NLWA 447 (500)
Q Consensus 444 ~i~~ 447 (500)
+|.+
T Consensus 323 ~i~~ 326 (455)
T 2yqu_A 323 HMVR 326 (455)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9987
No 58
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4.3e-35 Score=288.19 Aligned_cols=301 Identities=17% Similarity=0.166 Sum_probs=216.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC--cccCcchhhhcc-ccccCccccccHHHHhccCCcEEEE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLS-GEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
+||+||||||+|+++|..|++ .|++|+|||+..- +.....+..+.. .......+...+...+++.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 75 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR------KGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVID 75 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEc
Confidence 689999999999999999998 6899999987421 110111111111 0111223445566777778999999
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccC-CCChHHHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFP-FSTLEDACRVDRKLSEL 234 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~-~~~~~~~~~~~~~l~~~ 234 (500)
+ +|..++.+...+ ..+.+.++++..+.||+||+|||+.|..|++||.+++... +..... .....
T Consensus 76 ~~~v~~i~~~~~~~--------~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~--- 141 (310)
T 1fl2_A 76 SQSASKLIPAAVEG--------GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CDGPL--- 141 (310)
T ss_dssp SCCEEEEECCSSTT--------CCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHGGG---
T ss_pred cCEEEEEEecccCC--------ceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---CcHhh---
Confidence 8 899997653200 0136777778789999999999999988889987543111 111111 11100
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHh-CCcEEEcCceEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLGYFVRC 313 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~-~gV~i~~~~~v~~ 313 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+. ++ +.+.+.|++ .||++++++.+++
T Consensus 142 -------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~ 205 (310)
T 1fl2_A 142 -------FKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTE 205 (310)
T ss_dssp -------GBTCEEEEECCSHHHHHHHHHHHTTBSE---EEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEE
T ss_pred -------cCCCEEEEECCCHHHHHHHHHHHHhCCE---EEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEE
Confidence 1168999999999999999999887665 99999987762 22 445666777 6999999999999
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~ 393 (500)
+..+++.. ..+.++. . ..++..++++|.||+|+|++|+.+++.. .++++++
T Consensus 206 i~~~~~~v--------------------~~v~~~~--~-~~g~~~~i~~D~vi~a~G~~p~~~~l~~------~l~~~~~ 256 (310)
T 1fl2_A 206 VKGDGSKV--------------------VGLEYRD--R-VSGDIHNIELAGIFVQIGLLPNTNWLEG------AVERNRM 256 (310)
T ss_dssp EEESSSSE--------------------EEEEEEE--T-TTCCEEEEECSEEEECSCEEESCGGGTT------TSCBCTT
T ss_pred EEcCCCcE--------------------EEEEEEE--C-CCCcEEEEEcCEEEEeeCCccCchHHhc------cccccCC
Confidence 98753100 1344431 1 1123357899999999999999888764 2667888
Q ss_pred CceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 394 g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
|+|.||+++|| +.|+||++|||+..+ ++.+..|+.+|+.+|.+|...+.++.
T Consensus 257 g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 257 GEIIIDAKCET-NVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp SCBCCCTTCBC-SSTTEEECSTTBSCS-------SCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CcEEcCCCCcc-CCCCEEEeecccCCc-------chhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 99999999998 999999999999862 36788999999999999999887653
No 59
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.9e-35 Score=308.39 Aligned_cols=295 Identities=18% Similarity=0.233 Sum_probs=219.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc------h----h------------h---hc--c
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM------L----Y------------E---LL--S 131 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~------~----~------------~---~~--~ 131 (500)
.+||+||||||+|++||..|++ .|++|+|||+++....... . + . .+ .
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~ 76 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQ------LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLH 76 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------HTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999 5889999999862111100 0 0 0 00 0
Q ss_pred cc------ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEe
Q 010827 132 GE------VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEY 192 (500)
Q Consensus 132 g~------~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~ 192 (500)
|. .+... +...+...+++.+++++.+.+..++.... .+...++ ..+.|
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~ 143 (476)
T 3lad_A 77 GISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKV-------------EVTAADGSSQVLDT 143 (476)
T ss_dssp TEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCE-------------EEECTTSCEEEECC
T ss_pred CcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEE-------------EEEcCCCceEEEEc
Confidence 00 00000 01112234556689999998777654422 5666666 57999
Q ss_pred cEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCe
Q 010827 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272 (500)
Q Consensus 193 d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~ 272 (500)
|+||+|||++|..|+.++.+. ..+.+..+...+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 144 d~lvlAtG~~p~~~~~~~~~~--~~v~~~~~~~~~~-------------~~~~~v~ViGgG~~g~e~A~~l~~~g~~--- 205 (476)
T 3lad_A 144 ENVILASGSKPVEIPPAPVDQ--DVIVDSTGALDFQ-------------NVPGKLGVIGAGVIGLELGSVWARLGAE--- 205 (476)
T ss_dssp SCEEECCCEEECCCTTSCCCS--SSEEEHHHHTSCS-------------SCCSEEEEECCSHHHHHHHHHHHHTTCE---
T ss_pred CEEEEcCCCCCCCCCCCCCCc--ccEEechhhhccc-------------cCCCeEEEECCCHHHHHHHHHHHHcCCc---
Confidence 999999999988766554321 1122333322221 2278999999999999999999988776
Q ss_pred EEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccc
Q 010827 273 VQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI 352 (500)
Q Consensus 273 vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 352 (500)
|+++++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.++ +.+.+.+.
T Consensus 206 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-----------------------~~~~v~~~--- 259 (476)
T 3lad_A 206 VTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKN-----------------------KQVTVKFV--- 259 (476)
T ss_dssp EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-----------------------SCEEEEEE---
T ss_pred EEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-----------------------CEEEEEEE---
Confidence 9999999999999999999999999999999999999999998755 44555543
Q ss_pred cCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHH
Q 010827 353 KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQ 432 (500)
Q Consensus 353 ~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~ 432 (500)
.+.+.+++++|.||+|+|++|+.+++... ..+++++++|+|.||+++|| +.|+|||+|||+.. +.++.
T Consensus 260 ~~~g~~~~~~D~vi~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~ 327 (476)
T 3lad_A 260 DAEGEKSQAFDKLIVAVGRRPVTTDLLAA---DSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRG--------AMLAH 327 (476)
T ss_dssp SSSEEEEEEESEEEECSCEEECCTTCCSS---CCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------CCCHH
T ss_pred eCCCcEEEECCEEEEeeCCcccCCCCCcc---ccCccccCCCCEeeCCCccc-CCCCEEEEEccCCC--------cccHH
Confidence 11112689999999999999998754211 23588899999999999998 99999999999975 67899
Q ss_pred HHHHHHHHHHHHHHHH
Q 010827 433 VAFQQADFAGWNLWAA 448 (500)
Q Consensus 433 ~A~~~g~~aa~~i~~~ 448 (500)
.|..||+.+|.+|.+.
T Consensus 328 ~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 328 KASEEGVVVAERIAGH 343 (476)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999999864
No 60
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=8.1e-36 Score=311.53 Aligned_cols=287 Identities=18% Similarity=0.217 Sum_probs=221.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchh-------------------hhc-cc------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY-------------------ELL-SG------ 132 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~-------------------~~~-~g------ 132 (500)
.+||+|||||++||+||..|++ .|++|+|||+. .++...... ... .+
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~ 98 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA------LGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP 98 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHh------CcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 4799999999999999999999 68999999994 322211000 000 00
Q ss_pred cccCc-----------cccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcC-CccEEEecEEEEeCC
Q 010827 133 EVDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-SGLIVEYDWLVLSLG 200 (500)
Q Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~g~~~~~d~lIlAtG 200 (500)
..+.. .+...+...++..+++++.+.+..++.. .+... ++..+.||+||+|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~v~~~~~~~~~d~lviAtG 163 (484)
T 3o0h_A 99 IFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEH---------------TLELSVTGERISAEKILIATG 163 (484)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEETTTCCEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEecCCeEEEeCEEEEccC
Confidence 00000 1122234555667999999988888643 45554 667899999999999
Q ss_pred CCCC-CCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 201 ~~p~-~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
+.|. .|.+||.+. . .+.++...+.. .+++++|||+|.+|+|+|..+++.+.+ |+++++.
T Consensus 164 ~~p~~~p~i~G~~~-~---~~~~~~~~~~~-------------~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~ 223 (484)
T 3o0h_A 164 AKIVSNSAIKGSDL-C---LTSNEIFDLEK-------------LPKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRG 223 (484)
T ss_dssp EEECCC--CBTGGG-S---BCTTTGGGCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCcccCCCCCCccc-c---ccHHHHHhHHh-------------cCCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECC
Confidence 9998 899998642 2 22223222221 278999999999999999999988776 9999999
Q ss_pred CccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccE
Q 010827 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359 (500)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~ 359 (500)
+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +++.+.+. ++++
T Consensus 224 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~ 274 (484)
T 3o0h_A 224 DLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE-----------------------NCYNVVLT------NGQT 274 (484)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECS-----------------------SSEEEEET------TSCE
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-----------------------CEEEEEEC------CCcE
Confidence 999999999999999999999999999999999998765 45556543 5678
Q ss_pred EeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHH
Q 010827 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (500)
Q Consensus 360 l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~ 439 (500)
+++|.||+|+|++|+..++... ..+++++++|+|.||+++|| +.|+|||+|||+.. ++++..|..||+
T Consensus 275 i~aD~Vi~A~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~ 342 (484)
T 3o0h_A 275 ICADRVMLATGRVPNTTGLGLE---RAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGH--------IQLTPVAIHDAM 342 (484)
T ss_dssp EEESEEEECCCEEECCTTCCHH---HHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHH
T ss_pred EEcCEEEEeeCCCcCCCCCChh---hcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------CcCHHHHHHHHH
Confidence 9999999999999998774311 23588889999999999998 99999999999985 678999999999
Q ss_pred HHHHHHHHH
Q 010827 440 FAGWNLWAA 448 (500)
Q Consensus 440 ~aa~~i~~~ 448 (500)
.+|.+|.+.
T Consensus 343 ~aa~~i~~~ 351 (484)
T 3o0h_A 343 CFVKNAFEN 351 (484)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHcCC
Confidence 999999864
No 61
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.7e-35 Score=292.12 Aligned_cols=297 Identities=19% Similarity=0.208 Sum_probs=222.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc--hhh----hcccc--ccCccccccHHHHhccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--LYE----LLSGE--VDAWEIAPRFADLLANT 150 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~--~~~----~~~g~--~~~~~~~~~~~~~~~~~ 150 (500)
.++|+|||||+|||++|..|++ .|++|+|||+++.+..... .+. ...+. .....+...+...++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM------RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKF 80 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTS
T ss_pred cceEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999 6899999999986542221 000 01111 12344556677777888
Q ss_pred CcEEEE-eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCC---CCCCCCCCCccccc---cCCCChHH
Q 010827 151 GVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA---FPFSTLED 223 (500)
Q Consensus 151 ~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~---~p~~~~i~G~~~~~---~~~~~~~~ 223 (500)
+++++. .+|+.++...+- .+.+.+++++ +.||+||+|||+ .|..|.+||.+.+. ... ...+
T Consensus 81 ~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~ 148 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADG----------VFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDD 148 (332)
T ss_dssp CCEEECSCCEEEEEECTTS----------CEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSC
T ss_pred CCcEEccCEEEEEEECCCC----------cEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCC
Confidence 999986 589999876541 1467777775 999999999999 88889999976421 111 2222
Q ss_pred HHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCc
Q 010827 224 ACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKV 303 (500)
Q Consensus 224 ~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV 303 (500)
...+ .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.+. ....+.|++.||
T Consensus 149 ~~~~---------------~~~~v~vvG~g~~~~e~a~~l~~~~~~---v~~~~~~~~~~~~------~~~~~~l~~~gv 204 (332)
T 3lzw_A 149 LQKF---------------AGRRVAILGGGDSAVDWALMLEPIAKE---VSIIHRRDKFRAH------EHSVENLHASKV 204 (332)
T ss_dssp GGGG---------------BTCEEEEECSSHHHHHHHHHHTTTBSE---EEEECSSSSCSSC------HHHHHHHHHSSC
T ss_pred HHHc---------------CCCEEEEECCCHhHHHHHHHHHhhCCe---EEEEEecCcCCcc------HHHHHHHhcCCe
Confidence 1111 157999999999999999999887665 9999998776321 223456889999
Q ss_pred EEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCC
Q 010827 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNN 383 (500)
Q Consensus 304 ~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~ 383 (500)
++++++.++++..+++. ..++++. . .+++++++++|.||+|+|++|+.++++.++
T Consensus 205 ~~~~~~~v~~i~~~~~~---------------------~~v~~~~--~-~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~- 259 (332)
T 3lzw_A 205 NVLTPFVPAELIGEDKI---------------------EQLVLEE--V-KGDRKEILEIDDLIVNYGFVSSLGPIKNWG- 259 (332)
T ss_dssp EEETTEEEEEEECSSSC---------------------CEEEEEE--T-TSCCEEEEECSEEEECCCEECCCGGGGGSS-
T ss_pred EEEeCceeeEEecCCce---------------------EEEEEEe--c-CCCceEEEECCEEEEeeccCCCchHHhhcC-
Confidence 99999999999875421 2344441 1 122467899999999999999988876544
Q ss_pred ccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 384 RLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 384 ~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
++. ++|++.||+++|| +.|+||++|||+..+. .++++..|+.||+.+|.+|.+.+.++.
T Consensus 260 ----~~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~ 318 (332)
T 3lzw_A 260 ----LDI-EKNSIVVKSTMET-NIEGFFAAGDICTYEG-----KVNLIASGFGEAPTAVNNAKAYMDPKA 318 (332)
T ss_dssp ----CCE-ETTEEECCTTSBC-SSTTEEECGGGEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ----ccc-cCCeEEeCCCCce-ecCCEEEccceecCCC-----CcceEeeehhhHHHHHHHHHHhhChhh
Confidence 566 6899999999999 9999999999996421 278899999999999999999998764
No 62
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=3.5e-35 Score=288.96 Aligned_cols=300 Identities=17% Similarity=0.142 Sum_probs=215.3
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCCcccCcc----hhhhc--cccccCccccccHHHHhccCCc
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFKPM----LYELL--SGEVDAWEIAPRFADLLANTGV 152 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~~~~----~~~~~--~g~~~~~~~~~~~~~~~~~~~v 152 (500)
++|+||||||+|+++|..|++ .|+ +|+|||++. +..... ...+. ........+...+.+.+++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 74 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR------GGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGL 74 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSC
T ss_pred ceEEEECccHHHHHHHHHHHH------CCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999 689 999999963 211111 00110 1112223344555666777889
Q ss_pred EEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-CCCChHHHHHHHHHH
Q 010827 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (500)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~~~~~~~~~~~~~~l 231 (500)
+++..++..++.+.+. +.+.+.++..+.||+||+|||+.|..|.+||.+++.. .+....... ..+
T Consensus 75 ~~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~ 140 (311)
T 2q0l_A 75 KHEMTAVQRVSKKDSH-----------FVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD---GFF 140 (311)
T ss_dssp EEECSCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH---GGG
T ss_pred EEEEEEEEEEEEcCCE-----------EEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC---hhh
Confidence 9888888888765431 3566667778999999999999999999998653210 011111111 100
Q ss_pred HHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHH-hCCcEEEcCce
Q 010827 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS-ARKVQLVLGYF 310 (500)
Q Consensus 232 ~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~-~~gV~i~~~~~ 310 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+. .. ..+.+.+. +.||++++++.
T Consensus 141 ----------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~ 201 (311)
T 2q0l_A 141 ----------YKNKEVAVLGGGDTAVEEAIYLANICKK---VYLIHRRDGFR--CA----PITLEHAKNNDKIEFLTPYV 201 (311)
T ss_dssp ----------GTTSEEEEECCSHHHHHHHHHHHTTSSE---EEEECSSSSCC--SC----HHHHHHHHTCTTEEEETTEE
T ss_pred ----------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeeCCccC--CC----HHHHHHHhhCCCeEEEeCCE
Confidence 1158999999999999999999887765 99999987652 22 23445555 47999999999
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 390 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~ 390 (500)
++++..+++.. ..+.++.. ..++..++++|.||+|+|++|+.++++..+. ..++++
T Consensus 202 v~~i~~~~~~v--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~-~~~l~~ 257 (311)
T 2q0l_A 202 VEEIKGDASGV--------------------SSLSIKNT---ATNEKRELVVPGFFIFVGYDVNNAVLKQEDN-SMLCKC 257 (311)
T ss_dssp EEEEEEETTEE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEECCGGGBCTTS-CBSSCB
T ss_pred EEEEECCCCcE--------------------eEEEEEec---CCCceEEEecCEEEEEecCccChhhhhcccc-cceeEe
Confidence 99998753100 13444421 0123347899999999999999988876421 123677
Q ss_pred CCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 391 NARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 391 ~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
+++|+|.||+++|| +.|+||++|||+..+ ++++..|+.||+.+|.+|.+.+.+
T Consensus 258 ~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 258 DEYGSIVVDFSMKT-NVQGLFAAGDIRIFA-------PKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp CTTSCBCCCTTCBC-SSTTEEECSTTBTTC-------CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEeCCcccc-CCCCeEEcccccCcc-------hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 88999999999999 999999999999852 578999999999999999988764
No 63
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.4e-35 Score=310.10 Aligned_cols=320 Identities=17% Similarity=0.206 Sum_probs=226.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC--------CcccCcchh-------------------hh-
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE--------RFVFKPMLY-------------------EL- 129 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~--------~~~~~~~~~-------------------~~- 129 (500)
..+||+||||||||++||..|++ .|++|+|||+.+ .++...... ..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~ 78 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQ------LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAH 78 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999 689999999732 222110000 00
Q ss_pred ccc-------cccCccccc-----------cHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--cE
Q 010827 130 LSG-------EVDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI 189 (500)
Q Consensus 130 ~~g-------~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~ 189 (500)
..| ..+...+.. .+...++..+++++.+.+..+++... .+...++ ..
T Consensus 79 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v-------------~v~~~~g~~~~ 145 (488)
T 3dgz_A 79 HYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV-------------RGVDKGGKATL 145 (488)
T ss_dssp HTTCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEE-------------EEECTTSCEEE
T ss_pred hcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeE-------------EEEeCCCceEE
Confidence 000 011111111 12234556789999888877765432 4555555 47
Q ss_pred EEecEEEEeCCCCCCCCC-CCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHh
Q 010827 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (500)
Q Consensus 190 ~~~d~lIlAtG~~p~~~~-i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~ 268 (500)
+.||+||||||++|..|+ +||.++.. .+.+++..+.. .+++++|||+|.+|+|+|..|++.+.
T Consensus 146 ~~~d~lViATGs~p~~p~~i~G~~~~~---~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~ 209 (488)
T 3dgz_A 146 LSAEHIVIATGGRPRYPTQVKGALEYG---ITSDDIFWLKE-------------SPGKTLVVGASYVALECAGFLTGIGL 209 (488)
T ss_dssp EEEEEEEECCCEEECCCSSCBTHHHHC---BCHHHHTTCSS-------------CCCSEEEECCSHHHHHHHHHHHHTTC
T ss_pred EECCEEEEcCCCCCCCCCCCCCccccc---CcHHHHHhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999998 99975432 23444333221 26899999999999999999999887
Q ss_pred hcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEee
Q 010827 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (500)
Q Consensus 269 ~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 348 (500)
+ |+++++. .+++.+++.+.+.+.+.|++.||++++++.+.++...++ +.+.+.+
T Consensus 210 ~---Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~----------------------~~~~v~~ 263 (488)
T 3dgz_A 210 D---TTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT----------------------NQLQVTW 263 (488)
T ss_dssp C---EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT----------------------SCEEEEE
T ss_pred c---eEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEE
Confidence 7 9999985 578888999999999999999999999999999976331 3444444
Q ss_pred cccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC-CCCceEeCCCcccCCCCCEEEecccccccCCCCCCC
Q 010827 349 QPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPL 427 (500)
Q Consensus 349 ~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~-~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~ 427 (500)
.+.. +++..++++|.||+|+|++|+.+++... ..+++++ ++|+|.||+++|| +.|+|||+|||+.. .
T Consensus 264 ~~~~-~g~~~~~~~D~vi~a~G~~p~~~~l~l~---~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~-------~ 331 (488)
T 3dgz_A 264 EDHA-SGKEDTGTFDTVLWAIGRVPETRTLNLE---KAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAEG-------R 331 (488)
T ss_dssp EETT-TTEEEEEEESEEEECSCEEESCGGGTGG---GGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBTT-------C
T ss_pred EeCC-CCeeEEEECCEEEEcccCCcccCcCCcc---ccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecCC-------C
Confidence 3110 1122368999999999999998875321 2357888 7899999999999 99999999999842 1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHCC---CCCCCceecCceeEEEecC
Q 010827 428 PATAQVAFQQADFAGWNLWAAIND---RPLLPFRFQNLGEMMILGR 470 (500)
Q Consensus 428 ~~~~~~A~~~g~~aa~~i~~~l~~---~~~~p~~~~~~~~~~~~G~ 470 (500)
+..+..|..||+.+|.+|.+.... ....|+..-....+.++|-
T Consensus 332 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGl 377 (488)
T 3dgz_A 332 PELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGL 377 (488)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEEC
T ss_pred CcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeC
Confidence 678889999999999999853221 1223333222345666663
No 64
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.1e-35 Score=291.64 Aligned_cols=300 Identities=16% Similarity=0.102 Sum_probs=218.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhh---hccc---cccCccccccHHHHhccCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLANTGV 152 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~---~~~g---~~~~~~~~~~~~~~~~~~~v 152 (500)
.++|+||||||||+++|..|++ .|++|+|||+.. ......... ..++ ......+...+...+++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAAR------ANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFET 77 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 4799999999999999999998 689999999753 211111000 0011 11122334445566777899
Q ss_pred EEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-CCCChHHHHHHHHHH
Q 010827 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (500)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~~~~~~~~~~~~~~l 231 (500)
+++.+++..++...+. +.+ ..++..+.||+||+|||+.|..|.+||.+.+.. .+..... ....+
T Consensus 78 ~~~~~~v~~i~~~~~~-----------~~v-~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~ 142 (320)
T 1trb_A 78 EIIFDHINKVDLQNRP-----------FRL-NGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGFF 142 (320)
T ss_dssp EEECCCEEEEECSSSS-----------EEE-EESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGGG
T ss_pred EEEEeeeeEEEecCCE-----------EEE-EeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCccc
Confidence 9998889999876542 244 456678999999999999998888888643210 1111111 11111
Q ss_pred HHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceE
Q 010827 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 232 ~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+. ..+.+.+.+.+.+++.||++++++.+
T Consensus 143 ----------~~~~~v~ViG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v 207 (320)
T 1trb_A 143 ----------YRNQKVAVIGGGNTAVEEALYLSNIASE---VHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTL 207 (320)
T ss_dssp ----------GTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEE
T ss_pred ----------cCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCcee
Confidence 1168999999999999999999887766 99999987663 35567777888889999999999999
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~ 391 (500)
+++..+++.. .+++++.. ...++.+++++|.||+|+|++|+.+++.. +++++
T Consensus 208 ~~i~~~~~~v--------------------~~v~~~~~--~~~g~~~~i~~D~vv~a~G~~p~~~~~~~------~l~~~ 259 (320)
T 1trb_A 208 EEVTGDQMGV--------------------TGVRLRDT--QNSDNIESLDVAGLFVAIGHSPNTAIFEG------QLELE 259 (320)
T ss_dssp EEEEECSSSE--------------------EEEEEECC--TTCCCCEEEECSEEEECSCEEESCGGGTT------TSCEE
T ss_pred EEEEcCCCce--------------------EEEEEEec--cCCCceEEEEcCEEEEEeCCCCChHHhcc------ccccc
Confidence 9998754110 12444410 01024468999999999999999888762 36677
Q ss_pred CCCceEeCCCc-----ccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCC
Q 010827 392 ARGQAETDETL-----CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (500)
Q Consensus 392 ~~g~i~vd~~~-----~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 452 (500)
+|++.||+.+ ++ +.|+||++|||+..+ ++.+..|+.+|+.+|.+|...|.++
T Consensus 260 -~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 316 (320)
T 1trb_A 260 -NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI-------YRQAITSAGTGCMAALDAERYLDGL 316 (320)
T ss_dssp -TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS-------SCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred -CceEEECCCcccccccC-CCCCEEEcccccCCc-------chhhhhhhccHHHHHHHHHHHHHhc
Confidence 8999999987 66 899999999999852 4688999999999999999999865
No 65
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=3.9e-35 Score=306.38 Aligned_cols=298 Identities=19% Similarity=0.218 Sum_probs=218.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC---------cccCcch----h---------------h
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER---------FVFKPML----Y---------------E 128 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~---------~~~~~~~----~---------------~ 128 (500)
...+||+||||||||++||..|++ .|++|+|||+.+. ++..... + .
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~ 80 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL------NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHE 80 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHH
Confidence 345899999999999999999999 6899999995211 1111000 0 0
Q ss_pred h-cccc-------ccCccccc-----------cHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCcc-
Q 010827 129 L-LSGE-------VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL- 188 (500)
Q Consensus 129 ~-~~g~-------~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~- 188 (500)
. ..|. .+...+.. .+...++..+++++.+.+..++.... .+...++.
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v-------------~v~~~~g~~ 147 (483)
T 3dgh_A 81 AAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTL-------------LAKLKSGER 147 (483)
T ss_dssp HHHTTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCE
T ss_pred HHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEE-------------EEEeCCCeE
Confidence 0 0000 01111111 11233456689999988877765432 45555663
Q ss_pred EEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHh
Q 010827 189 IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (500)
Q Consensus 189 ~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~ 268 (500)
.+.||+||||||++|..|++||.++.. .+.+++..+. ..+++++|||+|.+|+|+|..|++.+.
T Consensus 148 ~~~~d~lviATGs~p~~p~i~G~~~~~---~~~~~~~~~~-------------~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (483)
T 3dgh_A 148 TITAQTFVIAVGGRPRYPDIPGAVEYG---ITSDDLFSLD-------------REPGKTLVVGAGYIGLECAGFLKGLGY 211 (483)
T ss_dssp EEEEEEEEECCCEEECCCSSTTHHHHC---BCHHHHTTCS-------------SCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEcCEEEEeCCCCcCCCCCCCccccc---CcHHHHhhhh-------------hcCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 799999999999999999999975432 2344433222 127899999999999999999999887
Q ss_pred hcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEee
Q 010827 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (500)
Q Consensus 269 ~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 348 (500)
+ |+++++ ..+++.+++++.+.+.+.|++.||++++++.+++++..++ +.+.+.+
T Consensus 212 ~---Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~ 265 (483)
T 3dgh_A 212 E---PTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD----------------------GKLLVKY 265 (483)
T ss_dssp E---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT----------------------SCEEEEE
T ss_pred E---EEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------CcEEEEE
Confidence 7 999998 5678888999999999999999999999999999986432 3344544
Q ss_pred cccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCC
Q 010827 349 QPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP 428 (500)
Q Consensus 349 ~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~ 428 (500)
.+... ++..++++|.||+|+|++|+.+++... ..++++++ |+|.||+++|| +.|+|||+|||+.. .+
T Consensus 266 ~~~~~-~~~~~~~~D~vi~a~G~~p~~~~l~l~---~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~-------~~ 332 (483)
T 3dgh_A 266 KNVET-GEESEDVYDTVLWAIGRKGLVDDLNLP---NAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIYG-------KP 332 (483)
T ss_dssp EETTT-CCEEEEEESEEEECSCEEECCGGGTGG---GTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBTT-------SC
T ss_pred ecCCC-CceeEEEcCEEEECcccccCcCcCCch---hcCccccC-CEEEECcCCcc-CCCCEEEEEcccCC-------CC
Confidence 32111 134589999999999999998876321 23578888 99999999999 99999999999842 16
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 010827 429 ATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 429 ~~~~~A~~~g~~aa~~i~~~ 448 (500)
..+..|..||+.+|.+|.+.
T Consensus 333 ~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 333 ELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHHHHHHHcCC
Confidence 78899999999999999853
No 66
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.7e-35 Score=292.73 Aligned_cols=308 Identities=16% Similarity=0.147 Sum_probs=221.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc--hhh----hcccc--ccCccccccHHHHhcc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--LYE----LLSGE--VDAWEIAPRFADLLAN 149 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~--~~~----~~~g~--~~~~~~~~~~~~~~~~ 149 (500)
..+||+||||||+|+++|..|++ .|++|+|||+.+.+.+... .+. ...+. .....+...+.+.+++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM------NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAER 86 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998 6899999999876533211 000 00110 1123344455666677
Q ss_pred CCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCC---CCCCCCCCC-cccc----c-cCCC
Q 010827 150 TGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPG-AAEF----A-FPFS 219 (500)
Q Consensus 150 ~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~---~p~~~~i~G-~~~~----~-~~~~ 219 (500)
.+++++.+ +|+.++...+. .+.+.+.++..+.||+||+|||+ .|..+.+|| .+.. + +.+.
T Consensus 87 ~~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~ 156 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTKLDDG----------TFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK 156 (360)
T ss_dssp TCCEEECSCCEEEEEECTTS----------CEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS
T ss_pred hCCEEEcCCEEEEEEECCCc----------eEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC
Confidence 78888765 88888765431 13677777888999999999998 566777888 5332 1 1112
Q ss_pred ChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHH
Q 010827 220 TLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS 299 (500)
Q Consensus 220 ~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~ 299 (500)
+..+ + .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.+. +...+.+.+.++
T Consensus 157 ~~~~---~---------------~~~~vvVvG~G~~g~e~A~~l~~~g~~---V~lv~~~~~~~~~--~~~~~~l~~~~~ 213 (360)
T 3ab1_A 157 SVED---F---------------KGKRVVIVGGGDSALDWTVGLIKNAAS---VTLVHRGHEFQGH--GKTAHEVERARA 213 (360)
T ss_dssp CGGG---G---------------TTCEEEEECSSHHHHHHHHHTTTTSSE---EEEECSSSSCSSC--SHHHHSSHHHHH
T ss_pred CHHH---c---------------CCCcEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCCCCCC--HHHHHHHHHHhh
Confidence 2211 0 168999999999999999999887665 9999998776543 456666778888
Q ss_pred hCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCC
Q 010827 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVE 379 (500)
Q Consensus 300 ~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~ 379 (500)
+.||++++++.++++..+++.. ..+.++. ..++.+++++|.||+|+|++|+.++++
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~~v--------------------~~v~~~~----~~g~~~~i~~D~vi~a~G~~p~~~~l~ 269 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNGVL--------------------TRVHLRS----SDGSKWTVEADRLLILIGFKSNLGPLA 269 (360)
T ss_dssp HTSEEEESSEEEEEEEEETTEE--------------------EEEEEEE----TTCCEEEEECSEEEECCCBCCSCGGGG
T ss_pred cCceEEEcCcCHHHhccCCCce--------------------EEEEEEe----cCCCeEEEeCCEEEECCCCCCCHHHHH
Confidence 9999999999999998753100 1344431 112336899999999999999988876
Q ss_pred CCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCCcee
Q 010827 380 PPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRF 459 (500)
Q Consensus 380 ~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~ 459 (500)
..+ ++++ +|++.||+++|| +.|+||++|||+..+. .++++..|+.||..+|.+|.+.+.+.+..|+.|
T Consensus 270 ~~~-----~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~ 337 (360)
T 3ab1_A 270 RWD-----LELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPG-----KLKIIQTGLSEATMAVRHSLSYIKPGEKIRNVF 337 (360)
T ss_dssp GSS-----CCEE-TTEEECCTTSBC-SSTTEEECSTTEECTT-----CCCSHHHHHHHHHHHHHHHHHHHSCC-------
T ss_pred hhc-----cccc-cCeeeecCCCcC-CCCCEEEecCccCCCC-----ccceeehhHHHHHHHHHHHHhhcCCccccCcee
Confidence 543 5555 789999999999 9999999999997531 257899999999999999999998876555444
Q ss_pred c
Q 010827 460 Q 460 (500)
Q Consensus 460 ~ 460 (500)
.
T Consensus 338 ~ 338 (360)
T 3ab1_A 338 S 338 (360)
T ss_dssp -
T ss_pred c
Confidence 3
No 67
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.6e-35 Score=288.18 Aligned_cols=293 Identities=12% Similarity=0.128 Sum_probs=203.3
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-chhhhcc-ccccCccccccHHHHhccC-CcE
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLS-GEVDAWEIAPRFADLLANT-GVQ 153 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-~~~~~~~-g~~~~~~~~~~~~~~~~~~-~v~ 153 (500)
++.+||+|||||||||+||.+|++ .|++|+|||++...+... ..+.+.. ....+.++.....+.+.++ .+.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar------~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR------ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVH 77 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 556899999999999999999999 689999999975322110 0111110 0111222222333334444 567
Q ss_pred EEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-CCCChHHHHHHHHHHH
Q 010827 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKLS 232 (500)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~~~~~~~~~~~~~~l~ 232 (500)
++...+..+...... .+++.+.+++.+.||+||||||++|+.|++||.++... .+...........
T Consensus 78 ~~~~~~~~~~~~~~~----------~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~--- 144 (304)
T 4fk1_A 78 YYEKTVVMITKQSTG----------LFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWEL--- 144 (304)
T ss_dssp EEECCEEEEEECTTS----------CEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGG---
T ss_pred EEeeEEEEeeecCCC----------cEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHh---
Confidence 777777766543321 24688888899999999999999999999999753211 1111111111110
Q ss_pred HHHHhccCCCCccEEEEECCChh-HHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceE
Q 010827 233 ELERRNFGKDSLIRVAVVGCGYS-GVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 233 ~~~~~~~~~~~~k~V~VvGgG~~-g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
.+++++|||||.. ++|+|..+.+.+.+ |+++.+.+.+ .+.+.+.|++.|++++.+ .+
T Consensus 145 ----------~~~~~~VIggG~~~~~e~a~~~~~~~~~---v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~-~v 202 (304)
T 4fk1_A 145 ----------KDQPLIIISENEDHTLHMTKLVYNWSTD---LVIATNGNEL--------SQTIMDELSNKNIPVITE-SI 202 (304)
T ss_dssp ----------TTSCEEEECCSHHHHHHHHHHHTTTCSC---EEEECSSCCC--------CHHHHHHHHTTTCCEECS-CE
T ss_pred ----------cCCceeeecCCCchhhhHHHHHHhCCce---EEEEeccccc--------hhhhhhhhhccceeEeee-eE
Confidence 1467888888765 56777777666555 8988876543 345677889999999987 47
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~ 391 (500)
..+..++... ..+.+. +++++++|.+|++.|.+|+++++..+ +++++
T Consensus 203 ~~~~~~~~~~--------------------~~v~~~--------~g~~i~~~~~vi~~g~~~~~~~~~~~-----g~~~~ 249 (304)
T 4fk1_A 203 RTLQGEGGYL--------------------KKVEFH--------SGLRIERAGGFIVPTFFRPNQFIEQL-----GCELQ 249 (304)
T ss_dssp EEEESGGGCC--------------------CEEEET--------TSCEECCCEEEECCEEECSSCHHHHT-----TCCCC
T ss_pred EEeecCCCee--------------------eeeecc--------ccceeeecceeeeeccccCChhhhhc-----CeEEC
Confidence 7777654211 223332 77889999999888888777776654 48899
Q ss_pred CCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 392 ~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
++|+|.||+++|| +.|+|||+|||+..+ ++++..|+.+|+.||.+|.++|..
T Consensus 250 ~~G~I~vd~~~~T-s~p~IyA~GDv~~~~-------~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 250 SNGTFVIDDFGRT-SEKNIYLAGETTTQG-------PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp TTSSSCSSTTCBC-SSTTEEECSHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcCCcc-CCCCEEEEeccCCCc-------chHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 999999999999742 567889999999999999998864
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=9.5e-35 Score=288.68 Aligned_cols=306 Identities=17% Similarity=0.152 Sum_probs=213.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcC----CCCcccCcchhh---hccc---cccCccccccHHHHhc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQ----SERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLA 148 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~----~~~~~~~~~~~~---~~~g---~~~~~~~~~~~~~~~~ 148 (500)
.++|+||||||+|+++|..|++ .|++|+|||+ ............ ..++ ......+...+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~------~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 81 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR------AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSE 81 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999 6899999998 222211111000 0001 1112234445566677
Q ss_pred cCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccc--ccCCCChHHHHH
Q 010827 149 NTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF--AFPFSTLEDACR 226 (500)
Q Consensus 149 ~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~--~~~~~~~~~~~~ 226 (500)
+.+++++.+++..++...+. +.+.+ ++..+.||+||+|||++|..|++||.+.. .+..........
T Consensus 82 ~~gv~~~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (333)
T 1vdc_A 82 RFGTTIFTETVTKVDFSSKP-----------FKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAV 149 (333)
T ss_dssp HTTCEEECCCCCEEECSSSS-----------EEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHH
T ss_pred HCCCEEEEeEEEEEEEcCCE-----------EEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEecc
Confidence 78899988888888765431 35666 66789999999999999998999987541 111011111111
Q ss_pred HHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHH-HHHHhCCcEE
Q 010827 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAAL-KVLSARKVQL 305 (500)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~-~~l~~~gV~i 305 (500)
....+. . ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.. .+.+. +.+++.||++
T Consensus 150 ~~~~~~---~-----~~~~~v~VvG~G~~g~e~A~~l~~~g~~---V~lv~~~~~~~~------~~~~~~~~~~~~gv~i 212 (333)
T 1vdc_A 150 CDGAAP---I-----FRNKPLAVIGGGDSAMEEANFLTKYGSK---VYIIHRRDAFRA------SKIMQQRALSNPKIDV 212 (333)
T ss_dssp HHTTSG---G-----GTTSEEEEECCSHHHHHHHHHHTTTSSE---EEEECSSSSCCS------CHHHHHHHHTCTTEEE
T ss_pred Cccchh---h-----cCCCeEEEECCChHHHHHHHHHHhcCCe---EEEEecCCcCCc------cHHHHHHHHhCCCeeE
Confidence 111100 0 1168999999999999999999887665 999999876532 23333 4567889999
Q ss_pred EcCceEEEEecCcc--ccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCC
Q 010827 306 VLGYFVRCIRRVGE--FEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNN 383 (500)
Q Consensus 306 ~~~~~v~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~ 383 (500)
++++.++++..+++ .. ..+.++.. ..++.+++++|.||+|+|++|+.++++.
T Consensus 213 ~~~~~v~~i~~~~~~~~v--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~~~~--- 266 (333)
T 1vdc_A 213 IWNSSVVEAYGDGERDVL--------------------GGLKVKNV---VTGDVSDLKVSGLFFAIGHEPATKFLDG--- 266 (333)
T ss_dssp ECSEEEEEEEESSSSSSE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTT---
T ss_pred ecCCceEEEeCCCCccce--------------------eeEEEEec---CCCceEEEecCEEEEEeCCccchHHhhc---
Confidence 99999999987541 00 12444411 1123468999999999999999888752
Q ss_pred ccCCCCCCCCCceEeCCC-cccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCC
Q 010827 384 RLHDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLP 456 (500)
Q Consensus 384 ~~~~~~~~~~g~i~vd~~-~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p 456 (500)
+++++++|++.||++ ++| +.|+||++|||+..+ ++.+..|+.+|+.+|.+|...+.+++.+|
T Consensus 267 ---~l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~~~~ 329 (333)
T 1vdc_A 267 ---GVELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK-------YRQAITAAGTGCMAALDAEHYLQEIGSQE 329 (333)
T ss_dssp ---SSCBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ---cccccCCCCEEechhhccc-CCCCEEEeeeccCCC-------chhHHHHHHhHHHHHHHHHHHHHhccccc
Confidence 467788999999987 577 999999999999852 47899999999999999999998776544
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-34 Score=301.10 Aligned_cols=285 Identities=23% Similarity=0.264 Sum_probs=213.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC-------c---chh-----hhc--------cccc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL--------SGEV 134 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------~---~~~-----~~~--------~g~~ 134 (500)
..+||+||||||||++||..|++ .|++|+|||++ .++.. | ++. ..+ .|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~ 76 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ------LGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGIS 76 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH------HTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcc
Confidence 34899999999999999999999 58899999994 33211 0 000 000 1110
Q ss_pred ------cCcccc-----------ccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEE
Q 010827 135 ------DAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197 (500)
Q Consensus 135 ------~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIl 197 (500)
+...+. ..+..++++.+++++.+++..++. + ++.+++ ..+.||+|||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~--~-------------~v~v~~-~~~~~d~lvi 140 (458)
T 1lvl_A 77 VASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG--K-------------QVEVDG-QRIQCEHLLL 140 (458)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET--T-------------EEEETT-EEEECSEEEE
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC--C-------------EEEEee-EEEEeCEEEE
Confidence 011111 112345667799999887666542 2 566655 6899999999
Q ss_pred eCCCCCCCCC-CCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEE
Q 010827 198 SLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (500)
Q Consensus 198 AtG~~p~~~~-i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv 276 (500)
|||++|..|+ +|. +. .+.+.+++..+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++
T Consensus 141 ATGs~p~~~~~~~~-~~---~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv 200 (458)
T 1lvl_A 141 ATGSSSVELPMLPL-GG---PVISSTEALAPKA-------------LPQHLVVVGGGYIGLELGIAYRKLGAQ---VSVV 200 (458)
T ss_dssp CCCEEECCBTTBCC-BT---TEECHHHHTCCSS-------------CCSEEEEECCSHHHHHHHHHHHHHTCE---EEEE
T ss_pred eCCCCCCCCCCCCc-cC---cEecHHHHhhhhc-------------cCCeEEEECcCHHHHHHHHHHHHCCCe---EEEE
Confidence 9999988765 552 22 2345554433221 278999999999999999999998876 9999
Q ss_pred ecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCC
Q 010827 277 NVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (500)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 356 (500)
++.+.+++.+++.+.+.+.+.+++.||++++++.|++++. + + +.++. .+++
T Consensus 201 ~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-----------------------~-v~v~~----~~G~ 251 (458)
T 1lvl_A 201 EARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN-G-----------------------C-LLAND----GKGG 251 (458)
T ss_dssp CSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-----------------------E-EEEEC----SSSC
T ss_pred EcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-----------------------C-EEEEE----CCCc
Confidence 9999999988999999999999999999999999999987 4 4 44541 1112
Q ss_pred ccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHH
Q 010827 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQ 436 (500)
Q Consensus 357 ~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~ 436 (500)
.+++++|.||+|+|++|+.+++.. +..+++++++ +|.||+++|| +.|+||++|||+.. +.++..|..
T Consensus 252 ~~~i~~D~vv~a~G~~p~~~~l~~---~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~ 318 (458)
T 1lvl_A 252 QLRLEADRVLVAVGRRPRTKGFNL---ECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE--------PMLAHRAMA 318 (458)
T ss_dssp CCEECCSCEEECCCEEECCSSSSG---GGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS--------SCCHHHHHH
T ss_pred eEEEECCEEEECcCCCcCCCCCCc---HhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC--------cccHHHHHH
Confidence 368999999999999999886411 1235777777 9999999998 89999999999986 678889999
Q ss_pred HHHHHHHHHHH
Q 010827 437 QADFAGWNLWA 447 (500)
Q Consensus 437 ~g~~aa~~i~~ 447 (500)
||+.+|.+|.+
T Consensus 319 ~g~~aa~~i~g 329 (458)
T 1lvl_A 319 QGEMVAEIIAG 329 (458)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999975
No 70
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=9.3e-35 Score=303.82 Aligned_cols=292 Identities=17% Similarity=0.132 Sum_probs=215.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch----------h-----h---hcc--cc-----
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML----------Y-----E---LLS--GE----- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~----------~-----~---~~~--g~----- 133 (500)
.+||+||||||||++||..|++ .|++|+|||++. ++..... . . ... |.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~------~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK------HTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 3799999999999999999999 689999999975 2211100 0 0 000 00
Q ss_pred -ccCccccccHHHH-----------hcc-CCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC
Q 010827 134 -VDAWEIAPRFADL-----------LAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (500)
Q Consensus 134 -~~~~~~~~~~~~~-----------~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG 200 (500)
.+...+...+... +.. ..++++.+.....+. +++.++++..+.||+||||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~---------------~~v~~~~~~~~~~d~lViATG 145 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDE---------------HTLQVDDHSQVIAKRIVIATG 145 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEET---------------TEEEETTTEEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecC---------------CEEEEcCCcEEEeCEEEEccC
Confidence 1111111111111 111 134455555444432 367777778999999999999
Q ss_pred CCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 201 ~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
++|..|++++... ..+.+..+...+.. .+++|+|||+|.+|+|+|..|++.+.+ |+++++.+
T Consensus 146 s~p~~p~~~~~~~--~~v~t~~~~~~~~~-------------~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~ 207 (492)
T 3ic9_A 146 SRPNYPEFLAAAG--SRLLTNDNLFELND-------------LPKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSG 207 (492)
T ss_dssp EECCCCHHHHTTG--GGEECHHHHTTCSS-------------CCSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTT
T ss_pred CCCcCCCCCCccC--CcEEcHHHHhhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECC
Confidence 9999887665321 12234444333221 278999999999999999999998877 99999999
Q ss_pred ccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEE
Q 010827 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (500)
Q Consensus 281 ~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l 360 (500)
.+++.+++.+.+.+.+.|++. |++++++.+++++.++ +++.+.+.+ ..++.+++
T Consensus 208 ~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-----------------------~~v~v~~~~--~~G~~~~i 261 (492)
T 3ic9_A 208 SVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKE-----------------------DAVEVIYFD--KSGQKTTE 261 (492)
T ss_dssp CCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECS-----------------------SSEEEEEEC--TTCCEEEE
T ss_pred cccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-----------------------CEEEEEEEe--CCCceEEE
Confidence 999999999999999999988 9999999999998755 556665421 11123789
Q ss_pred eecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeC-CCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHH
Q 010827 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (500)
Q Consensus 361 ~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd-~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~ 439 (500)
++|.||+|+|++|+.+++... ..+++++++|++.|| +++|| +.|+|||+|||+.. +..+..|..||+
T Consensus 262 ~~D~Vi~a~G~~p~~~~l~l~---~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~ 329 (492)
T 3ic9_A 262 SFQYVLAATGRKANVDKLGLE---NTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNT--------LTLLHEAADDGK 329 (492)
T ss_dssp EESEEEECSCCEESCSSSCGG---GSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTS--------SCSHHHHHHHHH
T ss_pred ECCEEEEeeCCccCCCCCChh---hcCCEECCCCCEeECcccccC-CCCCEEEEEecCCC--------CccHHHHHHHHH
Confidence 999999999999998874321 336888999999999 99999 99999999999986 678889999999
Q ss_pred HHHHHHHHH
Q 010827 440 FAGWNLWAA 448 (500)
Q Consensus 440 ~aa~~i~~~ 448 (500)
.+|.+|.+.
T Consensus 330 ~aa~~i~~~ 338 (492)
T 3ic9_A 330 VAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHcCC
Confidence 999999874
No 71
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-34 Score=286.70 Aligned_cols=298 Identities=15% Similarity=0.126 Sum_probs=214.3
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhh---hccc---cccCccccccHHHHhccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLANT 150 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~---~~~g---~~~~~~~~~~~~~~~~~~ 150 (500)
+..++|+||||||+|+++|..|++ .|++|+|||+.. ......... ..++ ......+...+.+.+++.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 84 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR------AQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRF 84 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH------TTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 445899999999999999999999 689999999752 111110000 0011 112223444556667778
Q ss_pred CcEEEEeeEEEEecCCCCCCCCCceeecCcEE-EcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-CCCChHHHHHHH
Q 010827 151 GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVD 228 (500)
Q Consensus 151 ~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v-~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~~~~~~~~~~~~ 228 (500)
+++++.+++..++.... +.+ .++++..+.||+||+|||+.|..|++||.+.+.. .+...... .
T Consensus 85 ~v~~~~~~v~~i~~~~~------------~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~---~ 149 (335)
T 2a87_A 85 GADLRMEDVESVSLHGP------------LKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATC---D 149 (335)
T ss_dssp TCEEECCCEEEEECSSS------------SEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHH---H
T ss_pred CCEEEEeeEEEEEeCCc------------EEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeecc---c
Confidence 99999888888887222 356 6777788999999999999999999998643211 11111111 1
Q ss_pred HHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcC
Q 010827 229 RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 229 ~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
..+ ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+.. ...+ ..+.+++.||+++++
T Consensus 150 ~~~----------~~~~~v~ViG~G~~g~e~a~~l~~~g~~---V~l~~~~~~~~~--~~~~---~~~~~~~~gV~v~~~ 211 (335)
T 2a87_A 150 GFF----------FRDQDIAVIGGGDSAMEEATFLTRFARS---VTLVHRRDEFRA--SKIM---LDRARNNDKIRFLTN 211 (335)
T ss_dssp GGG----------GTTCEEEEECSSHHHHHHHHHHTTTCSE---EEEECSSSSCSS--CTTH---HHHHHHCTTEEEECS
T ss_pred hhh----------cCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEcCCcCCc--cHHH---HHHHhccCCcEEEeC
Confidence 111 1168999999999999999999887665 999999876532 1122 124456789999999
Q ss_pred ceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCC
Q 010827 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL 388 (500)
Q Consensus 309 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~ 388 (500)
+.+++++.++.. ..+.++.. .+++.+++++|.||+|+|++|+.+++.. ++
T Consensus 212 ~~v~~i~~~~~~---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~~~~------~l 261 (335)
T 2a87_A 212 HTVVAVDGDTTV---------------------TGLRVRDT---NTGAETTLPVTGVFVAIGHEPRSGLVRE------AI 261 (335)
T ss_dssp EEEEEEECSSSC---------------------CEEEEEEE---TTSCCEEECCSCEEECSCEEECCTTTBT------TB
T ss_pred ceeEEEecCCcE---------------------eEEEEEEc---CCCceEEeecCEEEEccCCccChhHhhc------cc
Confidence 999999875411 23555421 1224468999999999999999888752 47
Q ss_pred CCCCCCceEeCCC-cccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCC
Q 010827 389 PLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (500)
Q Consensus 389 ~~~~~g~i~vd~~-~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 452 (500)
+++++|++.||++ ++| +.|+||++|||+..+ ++.+..|+.+|+.+|.+|...+.++
T Consensus 262 ~~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~~-------~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 262 DVDPDGYVLVQGRTTST-SLPGVFAAGDLVDRT-------YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp CBCTTSCBCCSTTSSBC-SSTTEEECGGGTCCS-------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccEEeCCCCCcc-CCCCEEEeeecCCcc-------HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 7888999999986 566 999999999999852 4688999999999999999888654
No 72
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.4e-34 Score=300.29 Aligned_cols=313 Identities=19% Similarity=0.245 Sum_probs=228.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC--------cccC-------c---chhh-----------h
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--------FVFK-------P---MLYE-----------L 129 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--------~~~~-------~---~~~~-----------~ 129 (500)
.|||+||||||||+.||..+++ .|.+|+|||+... ++.. | ++.. .
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~------~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~ 115 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA------HGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSK 115 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhH
Confidence 4899999999999999999999 5889999997431 1110 1 1100 0
Q ss_pred cccc------ccCcc-----------ccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEc----CCcc
Q 010827 130 LSGE------VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL----ESGL 188 (500)
Q Consensus 130 ~~g~------~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~----~~g~ 188 (500)
..|. .++.. +...+...+++.+|+++.+....+++..- .+.. .+.+
T Consensus 116 ~~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v-------------~V~~~~~~~~~~ 182 (542)
T 4b1b_A 116 AYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTV-------------SYYLKGDLSKEE 182 (542)
T ss_dssp GGTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEE-------------EEEEC--CCCEE
T ss_pred hcCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcc-------------eEeecccCCceE
Confidence 0010 00001 11112344566789999988777765422 2221 2345
Q ss_pred EEEecEEEEeCCCCCCCCCCCCc-cccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHH
Q 010827 189 IVEYDWLVLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (500)
Q Consensus 189 ~~~~d~lIlAtG~~p~~~~i~G~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~ 267 (500)
.+.+|++|||||++|..|+.++. .+. +.+.+++..+... |++++|||||.+|+|+|..+++.+
T Consensus 183 ~i~a~~iiIATGs~P~~P~~~~~~~~~---~~ts~~~l~l~~l-------------P~~lvIIGgG~IGlE~A~~~~~lG 246 (542)
T 4b1b_A 183 TVTGKYILIATGCRPHIPDDVEGAKEL---SITSDDIFSLKKD-------------PGKTLVVGASYVALECSGFLNSLG 246 (542)
T ss_dssp EEEEEEEEECCCEEECCCSSSBTHHHH---CBCHHHHTTCSSC-------------CCSEEEECCSHHHHHHHHHHHHHT
T ss_pred EEeeeeEEeccCCCCCCCCcccCCCcc---ccCchhhhccccC-------------CceEEEECCCHHHHHHHHHHHhcC
Confidence 79999999999999998865443 222 2466666655443 899999999999999999999999
Q ss_pred hhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEe
Q 010827 268 EEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (500)
Q Consensus 268 ~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 347 (500)
.+ ||++++ +.+++.+++++...+.+.|++.||+++++..+.+++..+ +.+.+.
T Consensus 247 ~~---VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-----------------------~~~~v~ 299 (542)
T 4b1b_A 247 YD---VTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-----------------------DKILVE 299 (542)
T ss_dssp CC---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-----------------------TEEEEE
T ss_pred Ce---EEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecC-----------------------CeEEEE
Confidence 88 999987 567899999999999999999999999999999998866 566666
Q ss_pred ecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCce-EeCCCcccCCCCCEEEecccccccCCCCCC
Q 010827 348 LQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA-ETDETLCVKGHPRIFALGDSSALRDSSGRP 426 (500)
Q Consensus 348 ~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i-~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~ 426 (500)
+. ++.++++|.|++|+|++||++.+... ..++.++.++.+ .+|+++|| +.|+|||+|||+..
T Consensus 300 ~~------~~~~~~~D~vLvAvGR~Pnt~~L~le---~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~~------- 362 (542)
T 4b1b_A 300 FS------DKTSELYDTVLYAIGRKGDIDGLNLE---SLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAEN------- 362 (542)
T ss_dssp ET------TSCEEEESEEEECSCEEESCGGGCGG---GTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBTT-------
T ss_pred Ec------CCCeEEEEEEEEcccccCCccccCcc---cceeeecccCceEeccccccc-cCCCeEEeccccCC-------
Confidence 53 66778899999999999999877543 236777776654 78899999 99999999999964
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHC---CCCCCCceecCceeEEEecC
Q 010827 427 LPATAQVAFQQADFAGWNLWAAIN---DRPLLPFRFQNLGEMMILGR 470 (500)
Q Consensus 427 ~~~~~~~A~~~g~~aa~~i~~~l~---~~~~~p~~~~~~~~~~~~G~ 470 (500)
.|.+.+.|..+|+.++.+|.+.-. .....|+.--..+++.++|-
T Consensus 363 ~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGl 409 (542)
T 4b1b_A 363 VPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGY 409 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEEC
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeC
Confidence 267899999999999999986322 12233433223346667763
No 73
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=2.1e-35 Score=320.80 Aligned_cols=314 Identities=16% Similarity=0.096 Sum_probs=234.8
Q ss_pred HHHHhhhccccccccccccccccCCCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc
Q 010827 46 SFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM 125 (500)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~ 125 (500)
..+.|++||..++|.+..+... ...+...+++|+|||||||||+||..|++ +|++|+|||+++.+++...
T Consensus 362 ~~~~C~vnp~~g~e~~~~~~~~----~~~~~~~~~~VvIIGgG~AGl~aA~~La~------~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 362 SPIRCTQNPSMGEEWRRGWHPE----RIRAKESDARVLVVGAGPSGLEAARALGV------RGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp SCCCCSSCTTTTTTTTTCCCSS----CCCCCSSCCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSCTHHH
T ss_pred CcccCCcCcccCcccccccCcc----ccCcccccceEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCEee
Confidence 3567999999999875432211 11334567899999999999999999999 6899999999988776655
Q ss_pred hhhhccccccCccccccHHHHhccC-CcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCC--
Q 010827 126 LYELLSGEVDAWEIAPRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-- 202 (500)
Q Consensus 126 ~~~~~~g~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~-- 202 (500)
.....++......+...+...+.+. +++++.++ .++.+++..+.||+||+|||+.
T Consensus 432 ~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~----------------------~v~~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 432 QESALPGLSAWGRVKEYREAVLAELPNVEIYRES----------------------PMTGDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp HHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC----------------------CCCHHHHHHTTCCEEEECCCEEEC
T ss_pred eccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC----------------------eecHHHHhhcCCCEEEEcCCCccc
Confidence 5445555555555666677777776 78776552 2334445567899999999998
Q ss_pred ------CCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEEC--CChhHHHHHHHHHHHHhhcCeEE
Q 010827 203 ------PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG--CGYSGVELAATVSERLEEKGIVQ 274 (500)
Q Consensus 203 ------p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvG--gG~~g~e~A~~l~~~~~~~~~vt 274 (500)
|..|.+||.+.. .+.+..+.... ....+++|+||| +|.+|+|+|..|++.+.+ |+
T Consensus 490 ~~~~~~~~~~~i~G~~~~--~v~~~~~~l~~------------~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~---Vt 552 (690)
T 3k30_A 490 TDGVARFHTTALPIAEGM--QVLGPDDLFAG------------RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE---VS 552 (690)
T ss_dssp SSCCSSSCSSCCCBCTTS--EEECHHHHHTT------------CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE---EE
T ss_pred cccccccCCCCCCCCCCC--cEEcHHHHhCC------------CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe---eE
Confidence 446778886421 22334332211 112367999999 999999999999998776 99
Q ss_pred EEecCCccCCCCC-cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeeccccc
Q 010827 275 AINVETTICPTGT-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK 353 (500)
Q Consensus 275 lv~~~~~~~~~~~-~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 353 (500)
++++.+.+++... +.....+.+.|++.||++++++.|++++.+ .+.+... .
T Consensus 553 lv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-------------------------~~~v~~~---~ 604 (690)
T 3k30_A 553 IVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG-------------------------GVTVRDT---Y 604 (690)
T ss_dssp EEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT-------------------------EEEEEET---T
T ss_pred EEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC-------------------------eEEEEEc---c
Confidence 9999888776543 556788899999999999999999999873 3444321 1
Q ss_pred CCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHH
Q 010827 354 GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQV 433 (500)
Q Consensus 354 ~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~ 433 (500)
.++++++++|.||+|+|++|+.+++.++. ..+. ++ +.|+||++|||+. ++.+..
T Consensus 605 ~~~~~~i~aD~VV~A~G~~p~~~l~~~l~---------~~~~-------~t-~~~~VyaiGD~~~---------~~~~~~ 658 (690)
T 3k30_A 605 ASIERELECDAVVMVTARLPREELYLDLV---------ARRD-------AG-EIASVRGIGDAWA---------PGTIAA 658 (690)
T ss_dssp TCCEEEEECSEEEEESCEEECCHHHHHHH---------HHHH-------HT-SCSEEEECGGGTS---------CBCHHH
T ss_pred CCeEEEEECCEEEECCCCCCChHHHHHHh---------hhhc-------cc-CCCCEEEEeCCCc---------hhhHHH
Confidence 23667899999999999999987654321 1111 55 8999999999998 457778
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCceecCc
Q 010827 434 AFQQADFAGWNLWAAINDRPLLPFRFQNL 462 (500)
Q Consensus 434 A~~~g~~aa~~i~~~l~~~~~~p~~~~~~ 462 (500)
|+.||+.+|.+|.+.+.+++..||+.+..
T Consensus 659 A~~~g~~aa~~i~~~l~g~~~~p~~~~~~ 687 (690)
T 3k30_A 659 AVWSGRRAAEEFDAVLPSNDEVPFRREVT 687 (690)
T ss_dssp HHHHHHHHHHHTTCCCCCTTSCSSCCCCB
T ss_pred HHHHHHHHHHHHHhhccCCCCCCcChhhh
Confidence 99999999999999999988889887653
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=5.7e-33 Score=292.05 Aligned_cols=300 Identities=17% Similarity=0.184 Sum_probs=217.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC--cccCcchhhhccc-cccCccccccHHHHhccCCcE
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQ 153 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~ 153 (500)
...+||+||||||||++||.+|++ .|++|+|+|+... +........+... ......+...+...+++++++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~------~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~ 283 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR------KGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVD 283 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHh------CCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 346899999999999999999999 6899999987421 1000111111110 111223444566777788999
Q ss_pred EEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccc---cCCCChHHHHHHHH
Q 010827 154 FFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA---FPFSTLEDACRVDR 229 (500)
Q Consensus 154 ~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~---~~~~~~~~~~~~~~ 229 (500)
++.+ +|..++.....+ ..+.+.++++..+.||+||+|||++|..|.+||.+++. ...+...+.
T Consensus 284 v~~~~~v~~i~~~~~~~--------~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~----- 350 (521)
T 1hyu_A 284 VIDSQSASKLVPAATEG--------GLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDG----- 350 (521)
T ss_dssp EECSCCEEEEECCSSTT--------SCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCG-----
T ss_pred EEcCCEEEEEEeccCCC--------ceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCch-----
Confidence 9988 999997642100 01367777888999999999999999888999875321 111111110
Q ss_pred HHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHh-CCcEEEcC
Q 010827 230 KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLG 308 (500)
Q Consensus 230 ~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~-~gV~i~~~ 308 (500)
.+ ..+++|+|||+|++|+|+|..|++.+.+ |+++++.+.+... ..+.+.|++ .||+++++
T Consensus 351 ~~----------~~~k~V~ViGgG~~g~E~A~~L~~~g~~---Vtlv~~~~~l~~~------~~l~~~l~~~~gV~v~~~ 411 (521)
T 1hyu_A 351 PL----------FKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMKAD------QVLQDKVRSLKNVDIILN 411 (521)
T ss_dssp GG----------GBTSEEEEECCSHHHHHHHHHHHHHBSE---EEEECSSSSCCSC------HHHHHHHTTCTTEEEECS
T ss_pred hh----------cCCCeEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCcccCcC------HHHHHHHhcCCCcEEEeC
Confidence 00 0168999999999999999999998776 9999998876431 456677777 69999999
Q ss_pred ceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCC
Q 010827 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL 388 (500)
Q Consensus 309 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~ 388 (500)
+.++++..+++.. .++.+. +. ..++..++++|.||+++|++|+++++.. .+
T Consensus 412 ~~v~~i~~~~~~v--------------------~~v~~~--~~-~~g~~~~i~~D~vi~a~G~~pn~~~l~~------~l 462 (521)
T 1hyu_A 412 AQTTEVKGDGSKV--------------------VGLEYR--DR-VSGDIHSVALAGIFVQIGLLPNTHWLEG------AL 462 (521)
T ss_dssp EEEEEEEECSSSE--------------------EEEEEE--ET-TTCCEEEEECSEEEECCCEEESCGGGTT------TS
T ss_pred CEEEEEEcCCCcE--------------------EEEEEE--eC-CCCceEEEEcCEEEECcCCCCCchHHhh------hh
Confidence 9999998754100 123443 11 1123357899999999999999888864 26
Q ss_pred CCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 389 PLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 389 ~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
+++++|+|.||+++|| +.|+|||+|||+..+ .+.+..|+.+|+.+|.+|...|.+
T Consensus 463 ~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 463 ERNRMGEIIIDAKCET-SVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp CBCTTSCBCCCTTCBC-SSTTEEECSTTBCCS-------SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEeCCCCCC-CCCCEEEeecccCCC-------cceeeehHHhHHHHHHHHHHHHHh
Confidence 6788999999999999 999999999999862 468899999999999999988764
No 75
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=3.5e-33 Score=299.10 Aligned_cols=299 Identities=17% Similarity=0.235 Sum_probs=211.3
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC-CC-------cccCcc----hhhh---------------
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ER-------FVFKPM----LYEL--------------- 129 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~-~~-------~~~~~~----~~~~--------------- 129 (500)
...+||+|||||||||+||.+|++ .|++|+|||+. +. ++.... .+..
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~------~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~ 178 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK------YGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDA 178 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHh------CCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhH
Confidence 345899999999999999999999 68999999973 21 111000 0000
Q ss_pred -cccc-c-------cCcccccc-----------HHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCc--
Q 010827 130 -LSGE-V-------DAWEIAPR-----------FADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-- 187 (500)
Q Consensus 130 -~~g~-~-------~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-- 187 (500)
..|. . +...+..+ +...+...+++++.+....++.... .+...++
T Consensus 179 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v-------------~v~~~~g~~ 245 (598)
T 2x8g_A 179 EHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEV-------------QITDKNQKV 245 (598)
T ss_dssp HHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCE
T ss_pred HhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEE-------------EEEeCCCCe
Confidence 0010 0 00011111 1122445689998887777765422 3444455
Q ss_pred cEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHH
Q 010827 188 LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (500)
Q Consensus 188 ~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~ 267 (500)
..+.||+||||||++|+.|++||.+++.. +.+++..+. ..+++|+|||||++|+|+|..|++.+
T Consensus 246 ~~~~~d~lviAtGs~p~~p~i~G~~~~~~---~~~~~~~~~-------------~~~~~vvViGgG~~g~E~A~~l~~~g 309 (598)
T 2x8g_A 246 STITGNKIILATGERPKYPEIPGAVEYGI---TSDDLFSLP-------------YFPGKTLVIGASYVALECAGFLASLG 309 (598)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHCE---EHHHHTTCS-------------SCCCSEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCcccceE---cHHHHhhCc-------------cCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 47899999999999999999999654321 222221111 12679999999999999999999988
Q ss_pred hhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecC-----ccccccccCCCCCcccccccccCCc
Q 010827 268 EEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRV-----GEFEASVKQPESGAIPNIAADKNSD 342 (500)
Q Consensus 268 ~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (500)
.+ |+++++. .+++.+++.+.+.+.+.|++.||++++++.++++... ... ..+
T Consensus 310 ~~---Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~-------------------~~~ 366 (598)
T 2x8g_A 310 GD---VTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENN-------------------KPG 366 (598)
T ss_dssp CC---EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTT-------------------BCC
T ss_pred CE---EEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccC-------------------CCc
Confidence 76 9999997 7778888899999999999999999999988887531 000 003
Q ss_pred ceeEeecccccCCCcc--EEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEeccccccc
Q 010827 343 KYILELQPAIKGLESQ--IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALR 420 (500)
Q Consensus 343 ~v~l~~~~~~~~~~~~--~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~ 420 (500)
.+.+... . .+++ ++++|.||+|+|++|+++++... ..+++++++|+|.||+.+|| +.|+|||+|||+...
T Consensus 367 ~~~v~~~---~-~~g~~~~~~~D~vi~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~~~ 438 (598)
T 2x8g_A 367 LLLVKGH---Y-TDGKKFEEEFETVIFAVGREPQLSKVLCE---TVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINAGK 438 (598)
T ss_dssp EEEEEEE---E-TTSCEEEEEESEEEECSCEEECGGGTBCG---GGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBTTS
T ss_pred eEEEEEE---e-CCCcEEeccCCEEEEEeCCccccCccCch---hcCceECCCCcEEeCCCCcC-CCCCEEEEeeecCCC
Confidence 3433321 0 1333 34599999999999998765311 23578888999999999998 999999999996531
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010827 421 DSSGRPLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 421 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
+..+..|+.||+.+|.+|.+.
T Consensus 439 -------~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 439 -------PQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHC
T ss_pred -------CccHHHHHHhHHHHHHHHhcC
Confidence 568889999999999999864
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=5.4e-34 Score=294.08 Aligned_cols=307 Identities=16% Similarity=0.097 Sum_probs=209.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEE
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
...++|+|||||||||++|..|++ .|++|+|||+.+.++.... ..+++......+.....+++++.+++++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~------~G~~V~v~e~~~~~GG~l~--~gip~~~~~~~~~~~~~~~l~~~gv~~~~ 191 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA------KGYEVHVYDRYDRMGGLLV--YGIPGFKLEKSVVERRVKLLADAGVIYHP 191 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSCSTHHH--HTSCTTTSCHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH------CCCeEEEEeccCCCCCeee--ecCCCccCCHHHHHHHHHHHHHCCcEEEe
Confidence 456899999999999999999999 5899999999887543211 11112112233444556777788998887
Q ss_pred eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCC-CCCCCCCCccccccCCCChHHHHHHHHHHHHHH
Q 010827 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (500)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~-p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (500)
+.... + .++++++ .+.||+||||||+. |+.+.+||.+.. .+.+..++....... .+.
T Consensus 192 ~~~v~-----~-------------~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~a~~~l~~~~~~-~~~ 249 (456)
T 2vdc_G 192 NFEVG-----R-------------DASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLG--NIVAALDYLTTSNKV-SLG 249 (456)
T ss_dssp TCCBT-----T-------------TBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTT--TEEEHHHHHHHHHHH-HCT
T ss_pred CCEec-----c-------------EEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCC--CcEEHHHHHHHhhhh-hcc
Confidence 64211 0 1333333 35699999999996 678889986421 122222322211110 000
Q ss_pred Hhc------cCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc-CCCCCcchHHHHHHHHHhCCcEEEcC
Q 010827 236 RRN------FGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI-CPTGTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 236 ~~~------~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~-~~~~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
... .....+|+|+|||||++|+|+|..+.+.+.+ .|+++++.+.. ++.... ..+.+++.||+++++
T Consensus 250 ~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~--~Vtiv~r~~~~~~p~~~~-----e~~~~~~~Gv~~~~~ 322 (456)
T 2vdc_G 250 DTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGAT--SVKCLYRRDRKNMPGSQR-----EVAHAEEEGVEFIWQ 322 (456)
T ss_dssp TTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCS--EEEEECSSCSTTCSSCHH-----HHHHHHHTTCEEECC
T ss_pred cccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCC--EEEEEEeCCccCCCCCHH-----HHHHHHHCCCEEEeC
Confidence 000 0113479999999999999999999887653 29999998765 333322 235678889999999
Q ss_pred ceEEEEecCccccccccCCCCCcccccccccCCcceeEe---ec-cccc--------CCCccEEeecEEEEecCCCCCCC
Q 010827 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE---LQ-PAIK--------GLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 309 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~---~~-~~~~--------~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
+.++++..++.. .++.+. +. ...+ .++..++++|.||+|+|+.|+..
T Consensus 323 ~~~~~i~~~g~v---------------------~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~ 381 (456)
T 2vdc_G 323 AAPEGFTGDTVV---------------------TGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDL 381 (456)
T ss_dssp SSSCCEEEEEEE---------------------ETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCH
T ss_pred CCceEEeCCCcE---------------------EEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcc
Confidence 999988753211 112221 00 0000 12346899999999999999865
Q ss_pred --CCCCCCCccCCCCCCCCCceEeCCC-cccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 377 --HVEPPNNRLHDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 377 --~~~~~~~~~~~~~~~~~g~i~vd~~-~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
++..+ +++++++|+|.||+. ++| +.|+|||+|||+.. +.++..|+.+|+.+|.+|.+.|.+++
T Consensus 382 ~~~l~~~-----gl~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g--------~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 382 PNAFDEP-----ELKVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRG--------ASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp HHHHHST-----TSCBCTTSSBCCCTTTCBC-SSTTEEECGGGGSS--------CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccC-----CeeECCCCCEEECCCCCcC-CCCCEEEeccccCC--------chHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 55544 478889999999987 998 99999999999986 67899999999999999999998764
Q ss_pred CC
Q 010827 454 LL 455 (500)
Q Consensus 454 ~~ 455 (500)
+.
T Consensus 448 ~~ 449 (456)
T 2vdc_G 448 EA 449 (456)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.2e-33 Score=282.81 Aligned_cols=288 Identities=20% Similarity=0.186 Sum_probs=197.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc------------chhhhccccc---------cCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP------------MLYELLSGEV---------DAW 137 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~------------~~~~~~~g~~---------~~~ 137 (500)
+++|+|||||++|+++|..|++ .|++|+|||+++.+.... .....+.+.. ...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~------~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR------SGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARA 76 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------SSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHH
Confidence 4799999999999999999999 689999999987543210 0000011110 012
Q ss_pred cccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcE-EEcCCccEEEecEEEEeCCC--CCCCCCCCCccc
Q 010827 138 EIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGT-VLLESGLIVEYDWLVLSLGA--EPKLDVVPGAAE 213 (500)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~~d~lIlAtG~--~p~~~~i~G~~~ 213 (500)
.+...+..++++.+++++.+ +|+.++...+. +. +.++++ .+.||+||+|||. .|..|.+||..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-----------~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~ 144 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-----------LRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLES 144 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-----------EEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-----------EEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccc
Confidence 33344566667778988775 88888776542 35 777777 8999999999994 677889998754
Q ss_pred cc---cCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC-CccCCCC--C
Q 010827 214 FA---FPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE-TTICPTG--T 287 (500)
Q Consensus 214 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~-~~~~~~~--~ 287 (500)
.. .+.....+...+ .+++|+|||+|.+|+|+|..|++.+ + |+++.+. +.+++.. .
T Consensus 145 ~~~~~~~~~~~~~~~~~---------------~~~~v~VvG~G~~g~e~a~~l~~~~-~---v~~v~~~~~~~~~~~~~~ 205 (357)
T 4a9w_A 145 FAGIQLHSAHYSTPAPF---------------AGMRVAIIGGGNSGAQILAEVSTVA-E---TTWITQHEPAFLADDVDG 205 (357)
T ss_dssp CCSEEEEGGGCCCSGGG---------------TTSEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSCCCBCCTTCCT
T ss_pred cCCcEEEeccCCChhhc---------------CCCEEEEECCCcCHHHHHHHHHhhC-C---EEEEECCCCeecchhhcC
Confidence 21 111111111111 1689999999999999999998775 3 9999987 4555443 1
Q ss_pred cchHHHHHHHHH----------------------------hCCcEEEcCceEEEEecCccccccccCCCCCccccccccc
Q 010827 288 PGNREAALKVLS----------------------------ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADK 339 (500)
Q Consensus 288 ~~~~~~~~~~l~----------------------------~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (500)
..+.+.+.+.+. +.|+ +.....+.+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~----------------------- 261 (357)
T 4a9w_A 206 RVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP----------------------- 261 (357)
T ss_dssp HHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET-----------------------
T ss_pred ccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC-----------------------
Confidence 222222222222 2232 233333444443
Q ss_pred CCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCC--cccCCCCCEEEec--c
Q 010827 340 NSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET--LCVKGHPRIFALG--D 415 (500)
Q Consensus 340 ~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~--~~t~~~~~vyaiG--D 415 (500)
+.+.+. +++++++|.||+|+|++|+.++++..+ +. +++|+|.||+. +++ +.|+||++| |
T Consensus 262 --~~v~~~--------~g~~i~~D~vi~a~G~~p~~~~l~~~g-----l~-~~~G~i~vd~~~l~~t-~~~~vya~Gd~d 324 (357)
T 4a9w_A 262 --TGMQWA--------DGTERAFDAVIWCTGFRPALSHLKGLD-----LV-TPQGQVEVDGSGLRAL-AVPSVWLLGYGD 324 (357)
T ss_dssp --TEEECT--------TSCEEECSEEEECCCBCCCCGGGTTTT-----CB-CTTSCBCBCTTSCBBS-SCTTEEECSSCG
T ss_pred --CeeEEC--------CCCEecCCEEEECCCcCCCCcccCccc-----cc-CCCCCccccCCcccCC-CCCCeEEecccc
Confidence 344443 678999999999999999999987655 55 78899999998 777 999999999 5
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 416 SSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
|+.. .+..+..|+.+|+.+|.+|.+.|.+
T Consensus 325 ~~~~-------~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 325 WNGM-------ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp GGST-------TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cccc-------chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 5542 1566777999999999999999987
No 78
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=1.6e-34 Score=315.14 Aligned_cols=324 Identities=16% Similarity=0.060 Sum_probs=215.4
Q ss_pred HHHhhhccccccccccccccccCCCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch
Q 010827 47 FAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML 126 (500)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~ 126 (500)
.+.|.+|+..+.|.+..+... ...+...+++|+|||||||||+||..|++ +|++|+|||+++.+......
T Consensus 361 ~~~C~~n~~~g~e~~~~~~~~----~~~~~~~~~~VvIIGgGpAGl~aA~~L~~------~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 361 PMICTQNATAGEEYRRGWHPE----KFRQTKNKDSVLIVGAGPSGSEAARVLME------SGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCCCSSCTTTTTHHHHCCCTT----CCCCCSSCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTTTHHH
T ss_pred ceeeccCcccccccccccccc----ccccccCCceEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCeeee
Confidence 467999999998764321111 11233456899999999999999999999 69999999999876544333
Q ss_pred hhhccccccCccccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCC----
Q 010827 127 YELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE---- 202 (500)
Q Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~---- 202 (500)
...+++......+...+...++... . ....+..+... ..++.+++..+.||+||+|||+.
T Consensus 431 ~~~~pg~~~~~~~~~~~~~~i~~~~-~-~~~~~v~i~~~--------------~~v~~~~~~~~~~d~vviAtG~~~~~~ 494 (729)
T 1o94_A 431 VAALPGLGEWSYHRDYRETQITKLL-K-KNKESQLALGQ--------------KPMTADDVLQYGADKVIIATGARWNTD 494 (729)
T ss_dssp HTTSTTCGGGHHHHHHHHHHHHHHH-H-HSTTCEEECSC--------------CCCCHHHHHTSCCSEEEECCCEEECSS
T ss_pred cccCCChHHHHHHHHHHHHHHHHhh-c-ccCCceEEEeC--------------eEEehhhccccCCCEEEEcCCCCcccc
Confidence 2222332221122222222222110 0 00011222211 13444555578999999999998
Q ss_pred ----CCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEEC--CChhHHHHHHHHHHHHhhcCeEEEE
Q 010827 203 ----PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG--CGYSGVELAATVSERLEEKGIVQAI 276 (500)
Q Consensus 203 ----p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvG--gG~~g~e~A~~l~~~~~~~~~vtlv 276 (500)
|..|++||.+++...+.+..++... ....+++|+||| ||.+|+|+|..|++.+.+ |+++
T Consensus 495 ~~~~p~~~~ipG~~~~~~~v~~~~~~l~~------------~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv 559 (729)
T 1o94_A 495 GTNCLTHDPIPGADASLPDQLTPEQVMDG------------KKKIGKRVVILNADTYFMAPSLAEKLATAGHE---VTIV 559 (729)
T ss_dssp CCCTTTSSCCTTCCTTSTTEECHHHHHHC------------CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEE
T ss_pred cccCccCCCCCCccccCCCEEEHHHHhcC------------CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEE
Confidence 5677889875322233444443221 112368999998 999999999999998876 9999
Q ss_pred ecCCccCCC--CCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeec--c--
Q 010827 277 NVETTICPT--GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ--P-- 350 (500)
Q Consensus 277 ~~~~~~~~~--~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~--~-- 350 (500)
++.+ +++. ++.. ...+.+.|++.||++++++.+++|+.++ +.++.. +
T Consensus 560 ~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~-------------------------v~~~~~~~~~~ 612 (729)
T 1o94_A 560 SGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGR-------------------------MEIYNIWGDGS 612 (729)
T ss_dssp ESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTE-------------------------EEEEETTCSCS
T ss_pred eccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCe-------------------------EEEEEecCCce
Confidence 9988 5542 2333 5677888999999999999999998632 222110 0
Q ss_pred -----------cccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccc
Q 010827 351 -----------AIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSAL 419 (500)
Q Consensus 351 -----------~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~ 419 (500)
...+++..++++|.||+|+|++|+.+++..+. ..+|++++| +.|+||++|||+.
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~-------------~~vd~~~~t-~~~~VyAiGD~~~- 677 (729)
T 1o94_A 613 KRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELK-------------ARESEWAEN-DIKGIYLIGDAEA- 677 (729)
T ss_dssp CCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHH-------------HTGGGTGGG-TCCEEEECGGGTS-
T ss_pred EEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHh-------------hhccccccc-CCCCeEEEeCccc-
Confidence 00112344699999999999999987664321 126788998 9999999999987
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc
Q 010827 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL 462 (500)
Q Consensus 420 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~~~~~ 462 (500)
+..+..|+.||+.+|.+|.+.+... ..||....+
T Consensus 678 --------~~~~~~A~~~G~~aA~~i~~~l~~~-~~p~~~~~~ 711 (729)
T 1o94_A 678 --------PRLIADATFTGHRVAREIEEANPQI-AIPYKRETI 711 (729)
T ss_dssp --------CCCHHHHHHHHHHHHHTTTSSCTTS-CCCCCCCCC
T ss_pred --------hhhHHHHHHHHHHHHHHhhhhcccC-CCCeeeecc
Confidence 4578899999999999998877654 447754443
No 79
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.98 E-value=3.6e-32 Score=273.91 Aligned_cols=294 Identities=14% Similarity=0.147 Sum_probs=200.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCCccc------------Ccchhhhcccc------------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVF------------KPMLYELLSGE------------ 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~------------~~~~~~~~~g~------------ 133 (500)
.++|+|||||++|+++|..|++ .|+ +|+|||+++ ++. .+.+.....+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~------~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 76 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD------FGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSP 76 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCH
T ss_pred cCcEEEECcCHHHHHHHHHHHH------cCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccc
Confidence 4799999999999999999998 688 999999986 211 01000000010
Q ss_pred --------ccCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCC
Q 010827 134 --------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (500)
Q Consensus 134 --------~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~ 204 (500)
.....+...+..++++.+++++.+ +|+.++.... .+.+.+.++ .+.||+||+|||+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~-----------~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 77 AFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDA-----------YYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-----------SEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred cccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC-----------eEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 001112233455666778998876 7888886543 135666665 6999999999999765
Q ss_pred CCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC
Q 010827 205 LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP 284 (500)
Q Consensus 205 ~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~ 284 (500)
|.+|+ ....+.....+. .. ..+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++
T Consensus 145 -p~ip~--~~~~~~~~~~~~---~~------------~~~~~vvVvG~G~~g~e~a~~l~~~g~~---V~lv~~~~~~~~ 203 (369)
T 3d1c_A 145 -PKKPF--KYGIHYSEIEDF---DN------------FNKGQYVVIGGNESGFDAAYQLAKNGSD---IALYTSTTGLND 203 (369)
T ss_dssp -BCCCS--SSCEEGGGCSCG---GG------------SCSSEEEEECCSHHHHHHHHHHHHTTCE---EEEECC------
T ss_pred -cCCCC--CceechhhcCCh---hh------------cCCCEEEEECCCcCHHHHHHHHHhcCCe---EEEEecCCCCCC
Confidence 56666 222111111110 00 0157999999999999999999988766 999999887663
Q ss_pred C-------CCcchHHHHHHHHHhCC-cEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCC
Q 010827 285 T-------GTPGNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (500)
Q Consensus 285 ~-------~~~~~~~~~~~~l~~~g-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 356 (500)
. +++...+.+.+.|++.| |++++++.|.+++.++ +.+.+.+. +
T Consensus 204 ~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-----------------------~~~~v~~~------~ 254 (369)
T 3d1c_A 204 PDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-----------------------GQYHISFD------S 254 (369)
T ss_dssp ----CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-----------------------TEEEEEES------S
T ss_pred CCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-----------------------CceEEEec------C
Confidence 2 44566788888899997 9999999999996533 44444442 4
Q ss_pred ccEE-eecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHH
Q 010827 357 SQIF-EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAF 435 (500)
Q Consensus 357 ~~~l-~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~ 435 (500)
++++ .+|.||+|+|++|+.+++... .++ +++|++.||+.++.++.|+||++|||+..+.. ....+..+.
T Consensus 255 g~~~~~~d~vi~a~G~~~~~~~~~~~-----~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~----~~~~~~~~~ 324 (369)
T 3d1c_A 255 GQSVHTPHEPILATGFDATKNPIVQQ-----LFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNA----KLCYIYKFR 324 (369)
T ss_dssp SCCEEESSCCEECCCBCGGGSHHHHH-----HSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC----CCCSHHHHG
T ss_pred CeEeccCCceEEeeccCCccchhhhh-----hcc-CCCCCEEechhhcccCCCCeEEeccccccCCe----eEEEEehhh
Confidence 4445 469999999999998665432 244 67899999976444499999999999986321 122445678
Q ss_pred HHHHHHHHHHHHHHCC
Q 010827 436 QQADFAGWNLWAAIND 451 (500)
Q Consensus 436 ~~g~~aa~~i~~~l~~ 451 (500)
.||+.+|++|.+.+..
T Consensus 325 ~~a~~~a~~l~~~~~~ 340 (369)
T 3d1c_A 325 ARFAVLAHLLTQREGL 340 (369)
T ss_dssp GGHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcccCC
Confidence 8999999999988764
No 80
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=1.1e-31 Score=290.68 Aligned_cols=287 Identities=18% Similarity=0.201 Sum_probs=208.3
Q ss_pred HHHHhhhccccccccccccccccCCCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc
Q 010827 46 SFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM 125 (500)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~ 125 (500)
..+.|.+||..++|.... . .+...+++|+||||||||++||..|++ +|++|+|||+++.+++...
T Consensus 349 ~~~~C~~np~~~~e~~~~--------~-~~~~~~~~vvIIGgG~AGl~aA~~l~~------~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 349 KVTSCLVNPRACHETKMP--------I-LPAVQKKNLAVVGAGPAGLAFAINAAA------RGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCCCCSSCTTTTCTTTSC--------C-CSCSSCCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSCTTHH
T ss_pred CceEEEeCcccccccccC--------C-CCCCCCCeEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCCeee
Confidence 356799999999886541 1 233456899999999999999999998 6899999999988766654
Q ss_pred hhhhccccccCccccccHHHHhccCCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEE-EecEEEEeCCCCCC
Q 010827 126 LYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIV-EYDWLVLSLGAEPK 204 (500)
Q Consensus 126 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~d~lIlAtG~~p~ 204 (500)
+...+.+......+...+..++++.+++++.++. +... .+ .||+||||||++|.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~----------------------v~~~---~~~~~d~lviAtG~~p~ 468 (671)
T 1ps9_A 414 IAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHT----------------------VTAD---QLQAFDETILASGIVPR 468 (671)
T ss_dssp HHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCC----------------------CCSS---SSCCSSEEEECCCEEEC
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcE----------------------ecHH---HhhcCCEEEEccCCCcC
Confidence 4444444333333344566667777898887641 1111 13 89999999999999
Q ss_pred CCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhh---------------
Q 010827 205 LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEE--------------- 269 (500)
Q Consensus 205 ~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~--------------- 269 (500)
.|++||.+.. .+.+..+.... ....+++|+|||||.+|+|+|..|++.+.+
T Consensus 469 ~~~i~G~~~~--~v~~~~~~l~~------------~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~ 534 (671)
T 1ps9_A 469 TPPIDGIDHP--KVLSYLDVLRD------------KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGID 534 (671)
T ss_dssp CCCCBTTTST--TEEEHHHHHTS------------CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBC
T ss_pred CCCCCCCCCC--cEeeHHHHhhC------------CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccc
Confidence 9999997531 12233322110 112378999999999999999999865421
Q ss_pred -------------------cCeEEEEecCCccC-CCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCC
Q 010827 270 -------------------KGIVQAINVETTIC-PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPES 329 (500)
Q Consensus 270 -------------------~~~vtlv~~~~~~~-~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~ 329 (500)
...|+++++.+..+ ..+++.....+.+.|++.||++++++.+++++.
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~------------- 601 (671)
T 1ps9_A 535 SSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD------------- 601 (671)
T ss_dssp TTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET-------------
T ss_pred ccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC-------------
Confidence 02377888765444 346677778888999999999999999999986
Q ss_pred CcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCC
Q 010827 330 GAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPR 409 (500)
Q Consensus 330 ~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~ 409 (500)
+++.++ . . ++.+++++|.||+|+|++|+++++..+ +. ..++
T Consensus 602 ------------~~v~~~-~---~-G~~~~i~~D~Vi~a~G~~p~~~l~~~l---------------------~~-~g~~ 642 (671)
T 1ps9_A 602 ------------DGLHVV-I---N-GETQVLAVDNVVICAGQEPNRALAQPL---------------------ID-SGKT 642 (671)
T ss_dssp ------------TEEEEE-E---T-TEEEEECCSEEEECCCEEECCTTHHHH---------------------HT-TTCC
T ss_pred ------------CeEEEe-c---C-CeEEEEeCCEEEECCCccccHHHHHHH---------------------Hh-cCCC
Confidence 455553 1 1 133689999999999999998776431 12 3478
Q ss_pred EEEecccccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 010827 410 IFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL 445 (500)
Q Consensus 410 vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 445 (500)
||++|||+... +..+..|++||+.+|.+|
T Consensus 643 v~aiGD~~~~~-------~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 643 VHLIGGCDVAM-------ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp EEECGGGTCCS-------SCCHHHHHHHHHHHHHHC
T ss_pred EEEECCcCccC-------chhHHHHHHHHHHHHHhC
Confidence 99999999852 346889999999999985
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=2.6e-30 Score=268.57 Aligned_cols=317 Identities=15% Similarity=0.109 Sum_probs=195.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCC-----CeEEEEcCCCCcccCcchh--hh-c--------------------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKK-----PQVLLVDQSERFVFKPMLY--EL-L-------------------- 130 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-----~~V~lie~~~~~~~~~~~~--~~-~-------------------- 130 (500)
.+||+|||||||||++|..|++. | ++|+|||+++.+.|.+... .. +
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~------g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~ 103 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER------AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSF 103 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH------HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhc------ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCCh
Confidence 46999999999999999999994 5 8999999999777654211 00 0
Q ss_pred ------cc---------c--ccCccccccHHHHhccCCcEEEEe-eEEEEecC---CCCCCCCCceeecCcEEEcCCcc-
Q 010827 131 ------SG---------E--VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPS---DHLGVNGPMACTHGGTVLLESGL- 188 (500)
Q Consensus 131 ------~g---------~--~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~---~~~~~~~~~~~~~~~~v~~~~g~- 188 (500)
.+ . .....+...+..+.+++++.+..+ +|+.++.. .+. ..+.+.+.++.
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~---------~~~~V~~~~g~g 174 (463)
T 3s5w_A 104 VNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQV---------EALRVISRNADG 174 (463)
T ss_dssp HHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEE---------EEEEEEEEETTS
T ss_pred hHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCce---------EEEEEEEecCCC
Confidence 00 0 000111122334445567777775 68888764 220 00145555554
Q ss_pred ---EEEecEEEEeCCCCCCCCC-CCCccc--cccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHH
Q 010827 189 ---IVEYDWLVLSLGAEPKLDV-VPGAAE--FAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAAT 262 (500)
Q Consensus 189 ---~~~~d~lIlAtG~~p~~~~-i~G~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~ 262 (500)
.+.||+||+|||+.|..|. +++... .+. ...+...-...+... ...+|+|+|||+|.+|+|+|..
T Consensus 175 ~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~vvVvGgG~sg~e~a~~ 245 (463)
T 3s5w_A 175 EELVRTTRALVVSPGGTPRIPQVFRALKGDGRVF---HHSQYLEHMAKQPCS------SGKPMKIAIIGGGQSAAEAFID 245 (463)
T ss_dssp CEEEEEESEEEECCCCEECCCGGGGGGTTCTTEE---EGGGHHHHHCC-------------CEEEEEECCSHHHHHHHHH
T ss_pred ceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEE---ECHHHHhhHHHhhhc------ccCCCeEEEECCCHhHHHHHHH
Confidence 8999999999999887776 222221 122 122211111111000 0016899999999999999999
Q ss_pred HHHH--HhhcCeEEEEecCCccCCCC--------------------CcchHHHHHHHHHh--------------------
Q 010827 263 VSER--LEEKGIVQAINVETTICPTG--------------------TPGNREAALKVLSA-------------------- 300 (500)
Q Consensus 263 l~~~--~~~~~~vtlv~~~~~~~~~~--------------------~~~~~~~~~~~l~~-------------------- 300 (500)
|++. +.+ |++++|.+.+++.. ++.....+.+.+..
T Consensus 246 l~~~~~~~~---Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (463)
T 3s5w_A 246 LNDSYPSVQ---ADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYR 322 (463)
T ss_dssp HHHHCTTEE---EEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHH
T ss_pred HHhcCCCCe---EEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHH
Confidence 9998 555 99999988775532 11222222222222
Q ss_pred ------CCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCC
Q 010827 301 ------RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 301 ------~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
.||++++++.|+++..++ +.+.+.+.+.. +++.+++++|.||+|+|++|+
T Consensus 323 ~~~~~~~~v~i~~~~~v~~v~~~~-----------------------~~~~v~~~~~~-~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 323 QKVSGIPRHAFRCMTTVERATATA-----------------------QGIELALRDAG-SGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp HHHHCCCCSEEETTEEEEEEEEET-----------------------TEEEEEEEETT-TCCEEEEEESEEEECCCEECC
T ss_pred HHhcCCCCeEEEeCCEEEEEEecC-----------------------CEEEEEEEEcC-CCCeEEEECCEEEEeeCCCCC
Confidence 699999999999998755 45555543221 224456999999999999999
Q ss_pred --CCCCCCCCCccCCCCCCCCCceEeCCCcccCC----CCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010827 375 --LPHVEPPNNRLHDLPLNARGQAETDETLCVKG----HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 375 --~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~----~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
.+++..+. ..+ |++.||+.+++.. .|+||++|||....+ ...+.....|.+++.+++..+.+.
T Consensus 379 ~~~~~l~~l~-----~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g---~~~~~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 379 LHRQLLEPLA-----EYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG---LSDTLLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp C-CTTTGGGG-----GGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC---TTTTSSTTHHHHHHHHHHHHHHHH
T ss_pred CccchhHHHH-----HHh---CCcccCcccccccCCCCCCeEEEcCCCcccCC---cCccchhHHHHHHHHHHHHHHhhc
Confidence 56665432 111 8899999998743 466999999987532 233566778888888776666555
Q ss_pred HCCCCCCCc
Q 010827 449 INDRPLLPF 457 (500)
Q Consensus 449 l~~~~~~p~ 457 (500)
..+.++.+|
T Consensus 448 ~~~~~~~~~ 456 (463)
T 3s5w_A 448 KPGTAARAL 456 (463)
T ss_dssp C--------
T ss_pred CCchhHHHH
Confidence 444454443
No 82
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=5e-31 Score=296.97 Aligned_cols=314 Identities=17% Similarity=0.134 Sum_probs=209.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
..++|+|||||||||+||..|++ .|+ +|+|||+.+.+++... . ..+......+......+++++.+++++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~------~G~~~Vtv~E~~~~~GG~~~-~-~ip~~~~~~~~~~~~~~~~~~~gv~~~~ 257 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR------LGYSDITIFEKQEYVGGLST-S-EIPQFRLPYDVVNFEIELMKDLGVKIIC 257 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSSSCSTHHH-H-TSCTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCcEEEEeCCCCCCcccc-c-cCCcccCCHHHHHHHHHHHHHCCcEEEc
Confidence 45899999999999999999999 688 7999999876544210 0 0111111122233344667788999988
Q ss_pred eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCC-CCCCCCC-CCccccccCCCChHHHHHHHHHHHHH
Q 010827 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA-EPKLDVV-PGAAEFAFPFSTLEDACRVDRKLSEL 234 (500)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~-~p~~~~i-~G~~~~~~~~~~~~~~~~~~~~l~~~ 234 (500)
+..... + .++++++..+.||+||||||+ .|+.+++ +|.+.. ..+.+..++...... .
T Consensus 258 ~~~v~~----~-------------~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~~~~---~ 316 (1025)
T 1gte_A 258 GKSLSE----N-------------EITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPLVAK---S 316 (1025)
T ss_dssp SCCBST----T-------------SBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHHHHH---H
T ss_pred ccEecc----c-------------eEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHHHHh---h
Confidence 753211 1 244444556789999999999 4876654 454311 122344443322111 1
Q ss_pred HHh---cc---CCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC-ccCCCCCcchHHHHHHHHHhCCcEEEc
Q 010827 235 ERR---NF---GKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET-TICPTGTPGNREAALKVLSARKVQLVL 307 (500)
Q Consensus 235 ~~~---~~---~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~-~~~~~~~~~~~~~~~~~l~~~gV~i~~ 307 (500)
... .. ....+++|+|||||++|+|+|..+.+.+.+ .||++++.+ .+++.++.++ +.+++.||++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~--~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~ 389 (1025)
T 1gte_A 317 SKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGAR--RVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLP 389 (1025)
T ss_dssp HCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCS--EEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEEC
T ss_pred cccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCC--EEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEe
Confidence 000 00 012367999999999999999999988752 299999987 4455444332 567889999999
Q ss_pred CceEEEEecCccccccccCCCCCcccccccccCCcceeEee-cccc------cCCCccEEeecEEEEecCCCCC-CCCCC
Q 010827 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL-QPAI------KGLESQIFEADLVLWTVGSKPL-LPHVE 379 (500)
Q Consensus 308 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~-~~~~------~~~~~~~l~~D~vi~a~G~~p~-~~~~~ 379 (500)
++.++++..+++.. .++++.. .... ..++..++++|.||+|+|++|+ ..++.
T Consensus 390 ~~~~~~i~~~~g~v--------------------~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~ 449 (1025)
T 1gte_A 390 FLSPRKVIVKGGRI--------------------VAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKE 449 (1025)
T ss_dssp SEEEEEEEEETTEE--------------------EEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHH
T ss_pred CCCceEEEccCCeE--------------------EEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhh
Confidence 99999987533100 1122210 0000 0113357999999999999875 44443
Q ss_pred CCCCccCCCCCCCCCceEeCC-CcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC---CC---
Q 010827 380 PPNNRLHDLPLNARGQAETDE-TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN---DR--- 452 (500)
Q Consensus 380 ~~~~~~~~~~~~~~g~i~vd~-~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~---~~--- 452 (500)
+. .+++++++|+|.||+ ++|| +.|+|||+|||+.. +.++..|+.||+.||.+|.+.|. +.
T Consensus 450 ~~----~gl~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~--------~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~ 516 (1025)
T 1gte_A 450 AL----SPIKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGM--------ANTTVESVNDGKQASWYIHKYIQAQYGASVS 516 (1025)
T ss_dssp HT----TTSCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCS--------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cc----cCceECCCCCEEECCCCCcc-CCCCEEEeCCCCCC--------chHHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 32 257888899999997 8998 99999999999986 67899999999999999998764 22
Q ss_pred --CCCCceec
Q 010827 453 --PLLPFRFQ 460 (500)
Q Consensus 453 --~~~p~~~~ 460 (500)
+..||.|+
T Consensus 517 ~~~~~p~~~~ 526 (1025)
T 1gte_A 517 AKPELPLFYT 526 (1025)
T ss_dssp SSCCBCCCCC
T ss_pred cCcCcccccc
Confidence 45677776
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=3.6e-30 Score=266.98 Aligned_cols=278 Identities=15% Similarity=0.149 Sum_probs=190.2
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCe---EEEEcCCCCcccCcch-----------------hhhc---------
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQ---VLLVDQSERFVFKPML-----------------YELL--------- 130 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~---V~lie~~~~~~~~~~~-----------------~~~~--------- 130 (500)
++|+|||||||||+||..|++.. ..|++ |+|||+++.++..... ...+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~---~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~ 79 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ---EKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECL 79 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH---HTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGT
T ss_pred CcEEEECccHHHHHHHHHHHhhh---hcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhc
Confidence 79999999999999999998821 03678 9999998754321110 0000
Q ss_pred ---------------cccccCccccccHHHHhccCCcE--EEE-eeEEEEecCCCCCCCCCceeecCcEEEcCC---c--
Q 010827 131 ---------------SGEVDAWEIAPRFADLLANTGVQ--FFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLES---G-- 187 (500)
Q Consensus 131 ---------------~g~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~---g-- 187 (500)
........+...+..++++.++. +.. .+|+.++..... ..|.+++.+ +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~---------~~~~V~~~~~~~g~~ 150 (464)
T 2xve_A 80 EFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS---------QTFTVTVQDHTTDTI 150 (464)
T ss_dssp CBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT---------TEEEEEEEETTTTEE
T ss_pred ccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC---------CcEEEEEEEcCCCce
Confidence 00011112223344555556765 543 478888754320 013455443 3
Q ss_pred cEEEecEEEEeCC--CCCCCCCCCCcccc---ccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHH
Q 010827 188 LIVEYDWLVLSLG--AEPKLDVVPGAAEF---AFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAAT 262 (500)
Q Consensus 188 ~~~~~d~lIlAtG--~~p~~~~i~G~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~ 262 (500)
..+.||+||+||| +.|+.|.+||.+.+ +.+...+.+...+ .+|+|+|||+|.+|+|+|..
T Consensus 151 ~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~---------------~~k~VvVVG~G~sg~eiA~~ 215 (464)
T 2xve_A 151 YSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEF---------------KDKTVLLVGSSYSAEDIGSQ 215 (464)
T ss_dssp EEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGG---------------TTSEEEEECCSTTHHHHHHH
T ss_pred EEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHc---------------CCCEEEEEcCCCCHHHHHHH
Confidence 5789999999999 88999999997642 1111111111100 16899999999999999999
Q ss_pred HHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCc
Q 010827 263 VSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD 342 (500)
Q Consensus 263 l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (500)
|++.+.+ |+++++.+.+++..- ..||+++ ..|++++. +
T Consensus 216 l~~~g~~---V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~-------------------------~ 253 (464)
T 2xve_A 216 CYKYGAK---KLISCYRTAPMGYKW------------PENWDER--PNLVRVDT-------------------------E 253 (464)
T ss_dssp HHHTTCS---EEEEECSSCCCCCCC------------CTTEEEC--SCEEEECS-------------------------S
T ss_pred HHHhCCe---EEEEEECCCCCCCCC------------CCceEEc--CCeEEEeC-------------------------C
Confidence 9998877 999999877654321 2478887 57888864 5
Q ss_pred ceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeC---CCcccCCCCCEEEecccccc
Q 010827 343 KYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD---ETLCVKGHPRIFALGDSSAL 419 (500)
Q Consensus 343 ~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd---~~~~t~~~~~vyaiGD~~~~ 419 (500)
+|+++ +++++++|.||+|+|++|+.+++... .+++++++|++ ++ ..+++ +.|+||++|||...
T Consensus 254 ~V~~~--------dG~~i~~D~Vi~atG~~p~~~~l~~~----~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~~ 319 (464)
T 2xve_A 254 NAYFA--------DGSSEKVDAIILCTGYIHHFPFLNDD----LRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQW 319 (464)
T ss_dssp EEEET--------TSCEEECSEEEECCCBCCCCTTBCTT----TCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCCS
T ss_pred EEEEC--------CCCEEeCCEEEECCCCCCCCCCcCcc----cccccCCCccc-ccccceEecC-CCCCEEEEeCcccc
Confidence 56664 66789999999999999999998752 24666666565 33 33566 89999999998863
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010827 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (500)
Q Consensus 420 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 449 (500)
.....|..||+.+|++|.+.+
T Consensus 320 ---------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 320 ---------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp ---------SCHHHHHHHHHHHHHHHTTSS
T ss_pred ---------cchHHHHHHHHHHHHHHcCCC
Confidence 467789999999999997543
No 84
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=1.5e-30 Score=268.76 Aligned_cols=313 Identities=14% Similarity=0.102 Sum_probs=207.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
+++|+||||||||++||..|++ .......|++|+|||+.+.++... .....++......+...+..++++.+++++.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 5799999999999999999988 521001178999999997654322 22233333344556666777888889999876
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCC-CCCCCCCCccccccCCCChHHHHHHHHHHHHHHH
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~-p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~ 236 (500)
. .++ + .++++++ .+.||+||+|||+. |..+++||.+. ..+.+..++....+......
T Consensus 82 v--~v~---~-------------~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~~~~~~~~d~~- 139 (456)
T 1lqt_A 82 V--VVG---E-------------HVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFVGWYNAHPHFE- 139 (456)
T ss_dssp C--CBT---T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHHHHTTCGGGT-
T ss_pred E--EEC---C-------------EEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHHhhhhcCcccc-
Confidence 2 121 1 2444444 47899999999997 68888999641 12233333322111000000
Q ss_pred hccCCCCccEEEEECCChhHHHHHHHHHHHHh----------------h--cCeEEEEecCCccCCCCCc----------
Q 010827 237 RNFGKDSLIRVAVVGCGYSGVELAATVSERLE----------------E--KGIVQAINVETTICPTGTP---------- 288 (500)
Q Consensus 237 ~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~----------------~--~~~vtlv~~~~~~~~~~~~---------- 288 (500)
.....-.+++|+|||+|++|+|+|..|++... . ...|+++.+...+...+.+
T Consensus 140 ~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp 219 (456)
T 1lqt_A 140 QVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLD 219 (456)
T ss_dssp TCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCT
T ss_pred cchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCC
Confidence 00011137899999999999999999986421 0 1149999998776544321
Q ss_pred ---------ch------------------HHHHHHHHHh------CCcEEEcCceEEEEecCccccccccCCCCCccccc
Q 010827 289 ---------GN------------------REAALKVLSA------RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNI 335 (500)
Q Consensus 289 ---------~~------------------~~~~~~~l~~------~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 335 (500)
++ .+.+.+.+++ +||++++++.+.+|..++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v--------------- 284 (456)
T 1lqt_A 220 GVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKV--------------- 284 (456)
T ss_dssp TEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSC---------------
T ss_pred CceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcE---------------
Confidence 11 2333444555 79999999999999874311
Q ss_pred ccccCCcceeEeecccc----------cCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccC
Q 010827 336 AADKNSDKYILELQPAI----------KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVK 405 (500)
Q Consensus 336 ~~~~~~~~v~l~~~~~~----------~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~ 405 (500)
.++.++....+ .+++.++++||.||+++|++|+. + . ++.++++|++.+|+.+|.+
T Consensus 285 ------~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-~-------gl~~d~~g~i~vn~~~rvt 349 (456)
T 1lqt_A 285 ------ERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-P-------GLPFDDQSGTIPNVGGRIN 349 (456)
T ss_dssp ------CEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-T-------TSCCBTTTTBCCEETTEET
T ss_pred ------eEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-C-------CCcccCCCCeeECCCCcCC
Confidence 23444310000 01123679999999999999996 3 1 4678888999999999944
Q ss_pred CCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 406 GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 406 ~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
+.|+||++|||+..+ ...+..|+.+|+.+|.+|...+.+
T Consensus 350 ~~pgvya~GD~~~gp-------~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 350 GSPNEYVVGWIKRGP-------TGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TCSSEEECTHHHHCS-------CSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCC-------chhHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999752 224557999999999999988764
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=3.3e-30 Score=266.40 Aligned_cols=312 Identities=15% Similarity=0.135 Sum_probs=202.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.+++|+||||||||+++|..|++.+ ++++|+|||+++.++... .....++......+...+.+++++.+++++.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g----~~~~V~vie~~~~~gg~~-~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~ 79 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH----SRAHVDIYEKQLVPFGLV-RFGVAPDHPEVKNVINTFTQTARSDRCAFYGN 79 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC----SSCEEEEECSSSSSCTHH-HHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC----CCCCEEEEeCCCcCCcee-ecccCCCCccHHHHHHHHHHHHHhCCcEEEee
Confidence 3579999999999999999999942 348999999998754221 11122222233445556677788889988876
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCC-CCCCCCCccccccCCCChHHHHHHHHHHHHHHH
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP-KLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p-~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~ 236 (500)
... . + .+++++. .+.||+||+|||+.+ +.|++||.+.. .+.+..++....+......
T Consensus 80 ~~v--~---~-------------~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~--gv~~~~~~~~~~~~~~d~~- 137 (460)
T 1cjc_A 80 VEV--G---R-------------DVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELP--GVFSARAFVGWYNGLPENR- 137 (460)
T ss_dssp CCB--T---T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTST--TEEEHHHHHHHHTTCGGGT-
T ss_pred eEE--e---e-------------EEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCC--cEEEHHHHHHHhhcCcccc-
Confidence 311 1 1 2333332 468999999999995 78899997421 1223333222111000000
Q ss_pred hccC-CCCccEEEEECCChhHHHHHHHHHHH----------------HhhcC--eEEEEecCCccC--------------
Q 010827 237 RNFG-KDSLIRVAVVGCGYSGVELAATVSER----------------LEEKG--IVQAINVETTIC-------------- 283 (500)
Q Consensus 237 ~~~~-~~~~k~V~VvGgG~~g~e~A~~l~~~----------------~~~~~--~vtlv~~~~~~~-------------- 283 (500)
... .-.+++|+|||+|++|+|+|..|++. ....+ .|+++.|...+.
T Consensus 138 -~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~l 216 (460)
T 1cjc_A 138 -ELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQL 216 (460)
T ss_dssp -TCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTC
T ss_pred -ccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcC
Confidence 000 01378999999999999999999831 11111 399999987652
Q ss_pred CCCC-----c-------------c----hHHHHHHHHHh--------------CCcEEEcCceEEEEecCcc--cccccc
Q 010827 284 PTGT-----P-------------G----NREAALKVLSA--------------RKVQLVLGYFVRCIRRVGE--FEASVK 325 (500)
Q Consensus 284 ~~~~-----~-------------~----~~~~~~~~l~~--------------~gV~i~~~~~v~~i~~~~~--~~~~~~ 325 (500)
+... . . ..+.+.+.+++ .||+++++..+.+|..+++ ..
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v---- 292 (460)
T 1cjc_A 217 PGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRA---- 292 (460)
T ss_dssp TTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSE----
T ss_pred CCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceE----
Confidence 2110 0 0 12333344545 8999999999999986421 00
Q ss_pred CCCCCcccccccccCCcceeEeecccc---------cCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCC-CCCCCCc
Q 010827 326 QPESGAIPNIAADKNSDKYILELQPAI---------KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL-PLNARGQ 395 (500)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~v~l~~~~~~---------~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~-~~~~~g~ 395 (500)
..+.++..... .+++.++++||.||+++|++|+. + . ++ +++++|+
T Consensus 293 ----------------~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~-----gl~~~d~~g~ 347 (460)
T 1cjc_A 293 ----------------AGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---D-----PSVPFDPKLG 347 (460)
T ss_dssp ----------------EEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---C-----TTSCCBTTTT
T ss_pred ----------------EEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---C-----CCcccccCCC
Confidence 12333210000 01234689999999999999995 3 2 46 7888899
Q ss_pred eEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCC
Q 010827 396 AETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (500)
Q Consensus 396 i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 453 (500)
+.+|+.+|+...|+|||+|||+..+ ...+..|+.+|+.+|.+|...+.+..
T Consensus 348 i~vn~~~rt~~~p~vya~Gd~~~g~-------~~~i~~a~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 348 VVPNMEGRVVDVPGLYCSGWVKRGP-------TGVITTTMTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp BCCEETTEETTCTTEEECTHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeECCCCcCcCCCCEEEEEeCCcCC-------CccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999993379999999999751 23467899999999999999887643
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=7.6e-29 Score=256.27 Aligned_cols=275 Identities=17% Similarity=0.099 Sum_probs=183.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCCCcccCcchhh---------------------------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVFKPMLYE--------------------------- 128 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~~~~~~~~--------------------------- 128 (500)
..++|+||||||+||++|..|++ .|+ +|+|||+.+.++.......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~------~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA------EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccC
Confidence 45899999999999999999999 678 9999999864421110000
Q ss_pred --------hcc-----------cc---------ccCccccccHHHHhccCCcEEEE-eeEEEEecCCCCCCCCCceeecC
Q 010827 129 --------LLS-----------GE---------VDAWEIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHG 179 (500)
Q Consensus 129 --------~~~-----------g~---------~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~ 179 (500)
.+. +. .....+...+..+.++.+..+.. .+|+.++.... .
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~-----------~ 147 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDG-----------S 147 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETT-----------E
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCC-----------e
Confidence 000 00 00001112233444444444443 47888865433 1
Q ss_pred cEEEcCC---cc---EEEecEEEEeCCC--CCCCCCCCCcccc-------ccCCCChHHHHHHHHHHHHHHHhccCCCCc
Q 010827 180 GTVLLES---GL---IVEYDWLVLSLGA--EPKLDVVPGAAEF-------AFPFSTLEDACRVDRKLSELERRNFGKDSL 244 (500)
Q Consensus 180 ~~v~~~~---g~---~~~~d~lIlAtG~--~p~~~~i~G~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 244 (500)
+.+++.+ +. .+.||+||+|||. .|+.|.+||.+++ +.+...+.+...+ .+
T Consensus 148 ~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~---------------~~ 212 (447)
T 2gv8_A 148 WVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELF---------------VG 212 (447)
T ss_dssp EEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGG---------------TT
T ss_pred EEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhc---------------CC
Confidence 3555544 55 7999999999998 7888999997532 1111111111111 16
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASV 324 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~ 324 (500)
|+|+|||+|.+|+|+|..|++.+.+ .|+++++.+.+ +++.||++. ..|+++..++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~--~V~l~~r~~~~---------------l~~~~i~~~--~~v~~~~~~~------ 267 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKH--PIYQSLLGGGD---------------IQNESLQQV--PEITKFDPTT------ 267 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCS--SEEEECTTCCS---------------CBCSSEEEE--CCEEEEETTT------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCC--cEEEEeCCCCc---------------CCCCCeEEe--cCeEEEecCC------
Confidence 8999999999999999999877543 29999987654 445677754 5688886533
Q ss_pred cCCCCCcccccccccCCcceeEeecccccCCCccE-EeecEEEEecCCCCCCCC-----CCCCCCccCCCCCCCCCceEe
Q 010827 325 KQPESGAIPNIAADKNSDKYILELQPAIKGLESQI-FEADLVLWTVGSKPLLPH-----VEPPNNRLHDLPLNARGQAET 398 (500)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~-l~~D~vi~a~G~~p~~~~-----~~~~~~~~~~~~~~~~g~i~v 398 (500)
+.|+++ +++. +++|.||+|+|++|+.++ ++.++ ..+..++.+.+
T Consensus 268 -----------------~~v~~~--------dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~-----~~i~~~~~~~~ 317 (447)
T 2gv8_A 268 -----------------REIYLK--------GGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPE-----TKLIDDGSHVH 317 (447)
T ss_dssp -----------------TEEEET--------TTEEECCCSEEEECCCBCCCCCCHHHHSCCSTT-----TCCCSSSSSCC
T ss_pred -----------------CEEEEC--------CCCEeccCCEEEECCCCCcCCCCCccccccccc-----CceecCCCccc
Confidence 456554 4555 789999999999999999 76532 12223455556
Q ss_pred CCCccc--CCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010827 399 DETLCV--KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 448 (500)
Q Consensus 399 d~~~~t--~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 448 (500)
+.+.++ .+.|+||++||+... .....|..||+.+|++|.+.
T Consensus 318 ~~~~~v~~~~~p~l~~~G~~~~~---------~~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 318 NVYQHIFYIPDPTLAFVGLALHV---------VPFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp SEETTTEETTCTTEEESSCCBSS---------CHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccCCCCcEEEEeccccc---------cCchHHHHHHHHHHHHHcCC
Confidence 544441 388999999999874 36788999999999999754
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=8.6e-29 Score=276.98 Aligned_cols=301 Identities=17% Similarity=0.085 Sum_probs=201.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcch--hhhccccccCccccccHHHHhcc-CCcEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML--YELLSGEVDAWEIAPRFADLLAN-TGVQFF 155 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~-~~v~~~ 155 (500)
.+|||||||||||++||..|++ .|++|+|||+++.++..... ...+.+. ...++...+.+.+.+ .+++++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~------~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~~ 200 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR------SGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTHL 200 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEEE
Confidence 4789999999999999999999 68999999999876543331 0111111 111222223333444 388888
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEEc------CCccEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHH
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLL------ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVD 228 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~------~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~ 228 (500)
.+ +|..++....... .........+.. +++..+.||+||||||+.|+.|++||.+.. .+.+..+...
T Consensus 201 ~~~~V~~i~~~~~~~~--v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~--gv~~~~~~~~-- 274 (965)
T 2gag_A 201 QRTTVFGSYDANYLIA--AQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRP--GIMLAGAVRS-- 274 (965)
T ss_dssp SSEEEEEEETTTEEEE--EEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCST--TEEEHHHHHH--
T ss_pred eCCEEEeeecCCceee--eEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCC--CEEEhHHHHH--
Confidence 75 7777765432100 000000011111 123478999999999999999999986421 1223322222
Q ss_pred HHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcC
Q 010827 229 RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 229 ~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
.+.... ...+++|+|||+|++|+|+|..|++.+.+ |+++++.+.+++ . .+.+++.||+++++
T Consensus 275 -~l~~~~-----~~~gk~vvViGgG~~g~E~A~~L~~~G~~---Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~~ 336 (965)
T 2gag_A 275 -YLNRYG-----VRAGARIAVATTNDSAYELVRELAATGGV---VAVIDARSSISA----A-----AAQAVADGVQVISG 336 (965)
T ss_dssp -HHHTTC-----EESCSSEEEEESSTTHHHHHHHHGGGTCC---SEEEESCSSCCH----H-----HHHHHHTTCCEEET
T ss_pred -HHHhcC-----CCCCCeEEEEcCCHHHHHHHHHHHHcCCc---EEEEECCCccch----h-----HHHHHhCCeEEEeC
Confidence 221110 11258999999999999999999988776 999999877642 1 56788999999999
Q ss_pred ceEEEEecC-ccccccccCCCCCcccccccccCCcceeEeeccccc-CCCccEEeecEEEEecCCCCCCCCCCCCCCccC
Q 010827 309 YFVRCIRRV-GEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK-GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (500)
Q Consensus 309 ~~v~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~ 386 (500)
+.++++..+ ++.. ..+++...+... +++.+++++|.||+++|++|+.+++..
T Consensus 337 ~~v~~i~~~~~~~v--------------------~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~------ 390 (965)
T 2gag_A 337 SVVVDTEADENGEL--------------------SAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ------ 390 (965)
T ss_dssp EEEEEEEECTTSCE--------------------EEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH------
T ss_pred CEeEEEeccCCCCE--------------------EEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh------
Confidence 999999863 2100 245554100000 112378999999999999999876543
Q ss_pred CCCCCCCCceEeCCCcc-----cCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 387 DLPLNARGQAETDETLC-----VKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 387 ~~~~~~~g~i~vd~~~~-----t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
.++.+.+|+.++ | +.|+||++|||+.. +. ...|+.||+.+|.+|.+.+..
T Consensus 391 -----~~g~i~vd~~~~~~v~~t-s~p~IyAaGD~a~~--------~~-l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 391 -----RQGKLDWDTTIHAFVPAD-AVANQHLAGAMTGR--------LD-TASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp -----TTCCEEEETTTTEEEECS-CCTTEEECGGGGTC--------CS-HHHHHHHHHHHHHHHHHHTTC
T ss_pred -----CCCcEEEcCcccccccCC-CCCCEEEEEecCCc--------hh-HHHHHHHHHHHHHHHHHHcCC
Confidence 246789998877 5 89999999999985 33 448999999999999998864
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.4e-27 Score=249.39 Aligned_cols=263 Identities=15% Similarity=0.136 Sum_probs=183.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhh-ccccc-cCccccccHHHHhccCCcEEEE
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYEL-LSGEV-DAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
.+||+|||||+||+++|.+|++ . ++|+|||+++.+++....... ..+.. ...++...+.+.+ ..+++++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~------~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~ 179 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ------Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYL 179 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT------T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEET
T ss_pred cCCEEEECccHHHHHHHHHHHh------c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEc
Confidence 4689999999999999999998 5 899999999876554322110 11100 1122222333333 45788765
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEc-CCcc--EEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHH
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLL-ESGL--IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~-~~g~--~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~ 232 (500)
. ++..++.+.+. +.+.. +++. .+.||+||+|||+.|+.|++||.+.. .+.+..+...+...
T Consensus 180 ~~~v~~i~~~~~~-----------~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~~-- 244 (493)
T 1y56_A 180 ETSALGVFDKGEY-----------FLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMNV-- 244 (493)
T ss_dssp TEEECCCEECSSS-----------EEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHHT--
T ss_pred CCEEEEEEcCCcE-----------EEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHHh--
Confidence 4 67777665442 12221 3333 68999999999999999999987521 12334443332221
Q ss_pred HHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 233 ~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
.....+++++|||+|++|+| +.+++.||++++++.|+
T Consensus 245 ------~~~~~~~~vvViGgG~~gle-------------------------------------~~l~~~GV~v~~~~~v~ 281 (493)
T 1y56_A 245 ------WEVAPGRKVAVTGSKADEVI-------------------------------------QELERWGIDYVHIPNVK 281 (493)
T ss_dssp ------SCBCSCSEEEEESTTHHHHH-------------------------------------HHHHHHTCEEEECSSEE
T ss_pred ------cccCCCCEEEEECCCHHHHH-------------------------------------HHHHhCCcEEEeCCeeE
Confidence 01123589999999999988 45677899999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~ 392 (500)
++..++ +...+.+ .+++++++|.||+++|.+|+.+++..++. .+.+++
T Consensus 282 ~i~~~~-----------------------~v~~v~~------~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~---~~~~~~ 329 (493)
T 1y56_A 282 RVEGNE-----------------------KVERVID------MNNHEYKVDALIFADGRRPDINPITQAGG---KLRFRR 329 (493)
T ss_dssp EEECSS-----------------------SCCEEEE------TTCCEEECSEEEECCCEEECCHHHHHTTC---CEEEET
T ss_pred EEecCC-----------------------ceEEEEe------CCCeEEEeCEEEECCCcCcCchHHHhcCC---CccccC
Confidence 998743 2112222 25688999999999999999888776542 223356
Q ss_pred CCceE-eCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 393 RGQAE-TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 393 ~g~i~-vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
+|++. ||++++ +.|+||++|||+.. ..+..|..||+.+|.+|.+.+.
T Consensus 330 ~g~i~~vd~~~~--s~~~vya~GD~~~~---------~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 330 GYYSPVLDEYHR--IKDGIYVAGSAVSI---------KPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp TEEEECCCTTSE--EETTEEECSTTTCC---------CCHHHHHHHHHHHHHHHHHHTT
T ss_pred CceeeccccccC--cCCCEEEEeccCCc---------cCHHHHHHHHHHHHHHHHHHcC
Confidence 88887 899988 78999999999984 5788999999999999998773
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=1.8e-27 Score=250.55 Aligned_cols=300 Identities=16% Similarity=0.184 Sum_probs=192.2
Q ss_pred CCeEEEECCcHHHHHHHHHhh-hcccCCCCCCeEEEEcCCCCcccCcchhhhcc--------------------------
Q 010827 79 KPRICILGGGFGGLYTALRLE-SLVWQDDKKPQVLLVDQSERFVFKPMLYELLS-------------------------- 131 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~-~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~-------------------------- 131 (500)
.++|+|||||++|+++|..|+ + .|++|+|||+++.++.......+.+
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~------~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~ 81 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHE------LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKT 81 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSB
T ss_pred CCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcc
Confidence 479999999999999999999 6 6889999999875432111100000
Q ss_pred ccccCccccccHHHHhccCCc--EEEE-eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC--CCCCCC
Q 010827 132 GEVDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (500)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG--~~p~~~ 206 (500)
......++...+....+++++ .+.. .+|+.++.+... ..+.+++++|..+.||+||+||| +.|..|
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE---------NLWEVTTDHGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT---------TEEEEEETTSCEEEEEEEEECCCSCCSBCCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC---------CEEEEEEcCCCEEEeCEEEECCcccccCCCC
Confidence 000111233344555666676 5554 478877654331 02468888888899999999999 689999
Q ss_pred CCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc-cCCC
Q 010827 207 VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-ICPT 285 (500)
Q Consensus 207 ~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~-~~~~ 285 (500)
++||.+++........+... . ....+|+|+|||+|.+|+|+|..|++.+.+ |++++|.+. +++.
T Consensus 153 ~ipG~~~f~g~~~~~~~~~~--~----------~~~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~~~~i~p~ 217 (540)
T 3gwf_A 153 NLPGLDTFEGETIHTAAWPE--G----------KSLAGRRVGVIGTGSTGQQVITSLAPEVEH---LTVFVRTPQYSVPV 217 (540)
T ss_dssp CCTTGGGCCSEEEEGGGCCS--S----------CCCTTSEEEEECCSHHHHHHHHHHTTTCSE---EEEEESSCCCEEEC
T ss_pred CCCCccccCCCEEEeecCCC--c----------cccccceEEEECCCchHHHHHHHHHhhCCE---EEEEECCCCccccC
Confidence 99998643111111100000 0 001278999999999999999999987766 999999887 4554
Q ss_pred CCcchHHHHHHHHH------------------------------------------------------------------
Q 010827 286 GTPGNREAALKVLS------------------------------------------------------------------ 299 (500)
Q Consensus 286 ~~~~~~~~~~~~l~------------------------------------------------------------------ 299 (500)
.++.+...+++.++
T Consensus 218 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 297 (540)
T 3gwf_A 218 GNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANE 297 (540)
T ss_dssp CCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHH
T ss_pred ccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHH
Confidence 44333322222221
Q ss_pred --------------------------------------------hCCcEEEc--CceEEEEecCccccccccCCCCCccc
Q 010827 300 --------------------------------------------ARKVQLVL--GYFVRCIRRVGEFEASVKQPESGAIP 333 (500)
Q Consensus 300 --------------------------------------------~~gV~i~~--~~~v~~i~~~~~~~~~~~~~~~~~~~ 333 (500)
+.+|+++. ...|++|+.
T Consensus 298 ~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~----------------- 360 (540)
T 3gwf_A 298 AAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA----------------- 360 (540)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS-----------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec-----------------
Confidence 34677774 567777776
Q ss_pred ccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCc-cCCCCCCC--CCceEeCCCcccCCCCCE
Q 010827 334 NIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR-LHDLPLNA--RGQAETDETLCVKGHPRI 410 (500)
Q Consensus 334 ~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~-~~~~~~~~--~g~i~vd~~~~t~~~~~v 410 (500)
++|++. +++++++|.||+|||+.++..++...... ..|..+++ .+.+.....+.+.+.||+
T Consensus 361 --------~gv~~~--------dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~ 424 (540)
T 3gwf_A 361 --------KGVVTE--------DGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNW 424 (540)
T ss_dssp --------SEEEET--------TCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTE
T ss_pred --------CeEEcC--------CCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCCCce
Confidence 566664 78899999999999999986444321100 01222211 123334444566789999
Q ss_pred EEe-cccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010827 411 FAL-GDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (500)
Q Consensus 411 yai-GD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 449 (500)
|++ |..... ......+-.|+..+++.|..-.
T Consensus 425 f~~~Gp~~~~--------~s~~~~~e~q~~~i~~~i~~~~ 456 (540)
T 3gwf_A 425 FMVLGPNGPF--------TNLPPSIETQVEWISDTIGYAE 456 (540)
T ss_dssp EESSCSSCBC--------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCC--------ccHHHHHHHHHHHHHHHHHHHH
Confidence 999 766542 3456677789999998886544
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=3.9e-25 Score=232.94 Aligned_cols=185 Identities=16% Similarity=0.156 Sum_probs=114.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhc----------------c----------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELL----------------S---------- 131 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~----------------~---------- 131 (500)
..++|||||||++|+++|..|++ .|++|+|||+++.++.......+. .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~------~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~ 81 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ------AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSE 81 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSB
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccc
Confidence 35799999999999999999998 688999999987543211100000 0
Q ss_pred ccccCccccccHHHHhccCCc--EEEE-eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC--CCCCCC
Q 010827 132 GEVDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (500)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG--~~p~~~ 206 (500)
......++...+....+++++ .+.. .+|+.++.+... ..+.+++++|+.+.||+||+||| +.|..|
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------RLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------TEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 001112233344455555555 3333 477777654321 12478888888999999999999 889999
Q ss_pred CCCCccccccCCCChHHH-HHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc-cCC
Q 010827 207 VVPGAAEFAFPFSTLEDA-CRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-ICP 284 (500)
Q Consensus 207 ~i~G~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~-~~~ 284 (500)
.+||.+.+.......... ...... .......+|+|+|||+|.+|+|+|..|++.+.+ |++++|.+. +++
T Consensus 153 ~ipG~~~f~g~~~h~~~~~~~~~~~------~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~---Vtv~~r~~~~i~p 223 (545)
T 3uox_A 153 DIKGIDSFKGESFHSSRWPTDAEGA------PKGVDFTGKRVGVIGTGATGVQIIPIAAETAKE---LYVFQRTPNWCTP 223 (545)
T ss_dssp CCTTGGGCCSEEEEGGGCCBCTTSC------BSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSE---EEEEESSCCCCEE
T ss_pred CCCCccccCCCeEEccccccccccc------ccccccCCCeEEEECCCccHHHHHHHHHhhCCE---EEEEEcCCCcccc
Confidence 999986431110000000 000000 000001268999999999999999999987666 999999886 344
Q ss_pred CC
Q 010827 285 TG 286 (500)
Q Consensus 285 ~~ 286 (500)
..
T Consensus 224 ~~ 225 (545)
T 3uox_A 224 LG 225 (545)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.92 E-value=5.2e-25 Score=232.17 Aligned_cols=172 Identities=19% Similarity=0.207 Sum_probs=117.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhcc--------------------------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLS-------------------------- 131 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~-------------------------- 131 (500)
..++|||||||++|+++|..|++ .|++|+|||+++.++.......+.+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~ 93 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS------QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSE 93 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCcc
Confidence 45799999999999999999998 6889999999875432111000000
Q ss_pred ccccCccccccHHHHhccCCc--EEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC--CCCCCC
Q 010827 132 GEVDAWEIAPRFADLLANTGV--QFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (500)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG--~~p~~~ 206 (500)
......++...+....+++++ .+..+ +|+.++.+... ..+.+++++|.++.||+||+||| +.|..|
T Consensus 94 ~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 94 KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG---------LRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT---------TEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 001112233344555666666 44444 78887654431 02468888888899999999999 789999
Q ss_pred CCCCccccc---cCCCChH-HHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 207 VVPGAAEFA---FPFSTLE-DACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 207 ~i~G~~~~~---~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
.+||.+.+. ++..... +...+ .+|+|+|||+|.+|+|+|..|++.+.+ |++++|.+.+
T Consensus 165 ~ipG~~~f~g~~~~~~~~~~~~~~~---------------~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~~~~ 226 (549)
T 4ap3_A 165 AFDGLDRFTGDIVHTARWPHDGVDF---------------TGKRVGVIGTGSSGIQSIPIIAEQAEQ---LFVFQRSANY 226 (549)
T ss_dssp CCTTGGGCCSEEEEGGGCCTTCCCC---------------BTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSCCC
T ss_pred CCCCcccCCCceEEecccccccccc---------------CCCEEEEECCCchHHHHHHHHHhhCCE---EEEEECCCCc
Confidence 999986432 1111100 11111 168999999999999999999998776 9999998863
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.90 E-value=8e-24 Score=223.64 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=111.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhh--------------c--c---------c
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYEL--------------L--S---------G 132 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~--------------~--~---------g 132 (500)
..++|+|||||++|+++|..|++ .|++|+|||+++.++.......+ . . .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~ 88 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE------LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTE 88 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCB
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCccc
Confidence 35799999999999999999999 68899999998754321100000 0 0 0
Q ss_pred -cccCccccccHHHHhccCC--cEEEE-eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCC--CCCCCC
Q 010827 133 -EVDAWEIAPRFADLLANTG--VQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (500)
Q Consensus 133 -~~~~~~~~~~~~~~~~~~~--v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG--~~p~~~ 206 (500)
.....++...+....++++ ..+.. .+|++++.+... ..+.+++++|.++.||+||+||| +.|..|
T Consensus 89 ~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p 159 (542)
T 1w4x_A 89 RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEAT---------NTWTVDTNHGDRIRARYLIMASGQLSVPQLP 159 (542)
T ss_dssp SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTT---------TEEEEEETTCCEEEEEEEEECCCSCCCCCCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCC---------CeEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 0000112222333334444 33443 377777653320 01467777888899999999999 578889
Q ss_pred CCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 207 VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 207 ~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
.+||.+.+............ +.+ ...+|+|+|||+|.+|+|++..|++.+.+ |+++.|.+.+
T Consensus 160 ~i~G~~~f~G~~~hs~~~~~--~~~---------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~---vtv~~r~~~~ 221 (542)
T 1w4x_A 160 NFPGLKDFAGNLYHTGNWPH--EPV---------DFSGQRVGVIGTGSSGIQVSPQIAKQAAE---LFVFQRTPHF 221 (542)
T ss_dssp CCTTGGGCCSEEEEGGGCCS--SCC---------CCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSCCC
T ss_pred CCCCcccCCCceEECCCCCC--chh---------ccCCCEEEEECCCccHHHHHHHHhhcCce---EEEEEcCCcc
Confidence 99997643111000000000 000 01178999999999999999999998776 9999987755
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.86 E-value=2.1e-21 Score=174.91 Aligned_cols=163 Identities=18% Similarity=0.190 Sum_probs=133.8
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC---------CC-----CcchHHHHHHHHHhCCcEEEcCceE
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---------TG-----TPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~---------~~-----~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
+|+|||+|++|+++|..|++.+.+ |+++++.+..+. .+ ++.+.+.+.+.+++.||+++.+ ++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 899999999999999999998766 999999876552 22 3567778888899999999999 99
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~ 391 (500)
++++.++ +.+.+.+. ++ ++++|.||+|+|..|+ +.+. .+++++
T Consensus 79 ~~i~~~~-----------------------~~~~v~~~------~g-~i~ad~vI~A~G~~~~--~~~~-----~g~~~~ 121 (180)
T 2ywl_A 79 KGVRDMG-----------------------GVFEVETE------EG-VEKAERLLLCTHKDPT--LPSL-----LGLTRR 121 (180)
T ss_dssp CEEEECS-----------------------SSEEEECS------SC-EEEEEEEEECCTTCCH--HHHH-----HTCCEE
T ss_pred EEEEEcC-----------------------CEEEEEEC------CC-EEEECEEEECCCCCCC--cccc-----CCCCcc
Confidence 9998754 44555532 44 8999999999999985 2222 246677
Q ss_pred CCCceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCCCce
Q 010827 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFR 458 (500)
Q Consensus 392 ~~g~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~p~~ 458 (500)
+|++.||+++|| +.|+||++|||+..+ .+++..|+.||+.+|.+|.+.+.+.++.+|+
T Consensus 122 -~g~i~vd~~~~t-~~~~i~a~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 179 (180)
T 2ywl_A 122 -GAYIDTDEGGRT-SYPRVYAAGVARGKV-------PGHAIISAGDGAYVAVHLVSDLRGEPYKDHA 179 (180)
T ss_dssp -TTEECCCTTCBC-SSTTEEECGGGGTCC-------SCCHHHHHHHHHHHHHHHHHHHHTSCCCCCC
T ss_pred -CceEEeCCCCCc-CCCCEEEeecccCcc-------hhhHHHHHHhHHHHHHHHHHHhhhccccccC
Confidence 899999999999 999999999999862 2388899999999999999999888777664
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.86 E-value=2.1e-20 Score=195.33 Aligned_cols=335 Identities=12% Similarity=0.121 Sum_probs=182.6
Q ss_pred CCCCCCeEEEECCcHHHHHHHHHhhhcccC--------CCCCCeEEEEcCCCCcccCcch--hh------hccccc----
Q 010827 75 PDKKKPRICILGGGFGGLYTALRLESLVWQ--------DDKKPQVLLVDQSERFVFKPML--YE------LLSGEV---- 134 (500)
Q Consensus 75 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~--------~~~g~~V~lie~~~~~~~~~~~--~~------~~~g~~---- 134 (500)
+....+||||||+||+||++|..|.+.+.. ...+.....+|+.+.+.|++.. +. ++....
T Consensus 35 p~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~ 114 (501)
T 4b63_A 35 PQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRD 114 (501)
T ss_dssp CTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTC
T ss_pred CCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccC
Confidence 334568999999999999999999875320 1135678899999988876532 11 000000
Q ss_pred ----------------------------cCccccccHHHHhccCCcEEEE-eeEEEEecCCCCCCCCCceeecCcEEEcC
Q 010827 135 ----------------------------DAWEIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLE 185 (500)
Q Consensus 135 ----------------------------~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~ 185 (500)
...++..+++...++.+..+.. .+|+++.....-.. ......|.|+..
T Consensus 115 P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~---~~~~~~~~V~~~ 191 (501)
T 4b63_A 115 PRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPS---SSVVDFFTVRSR 191 (501)
T ss_dssp TTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTT---SSCBCEEEEEEE
T ss_pred CCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeecccccccc---ccccceEEEEEe
Confidence 0011122233333444443433 36777755332100 001112455554
Q ss_pred Cc-----cEEEecEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHH
Q 010827 186 SG-----LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELA 260 (500)
Q Consensus 186 ~g-----~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A 260 (500)
++ ..+.++.||+|||..|.+|.+++....+++ ..+...-...+ . ...-.+|+|+|||+|.+|+|++
T Consensus 192 ~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~H---ss~y~~~~~~~---~---~~~~~gKrV~VVG~G~SA~ei~ 262 (501)
T 4b63_A 192 NVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIH---SSKYCTTLPAL---L---KDKSKPYNIAVLGSGQSAAEIF 262 (501)
T ss_dssp ETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEE---GGGHHHHHHHH---S---CCTTSCCEEEEECCSHHHHHHH
T ss_pred cCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceee---ccccccchhhc---c---ccccCCcEEEEECCcHHHHHHH
Confidence 32 368999999999998887776554333322 22222211111 0 1112379999999999999999
Q ss_pred HHHHHHHhhcCeEEEEecCCccCCCC---------CcchHHH-------------------------------HHHHHH-
Q 010827 261 ATVSERLEEKGIVQAINVETTICPTG---------TPGNREA-------------------------------ALKVLS- 299 (500)
Q Consensus 261 ~~l~~~~~~~~~vtlv~~~~~~~~~~---------~~~~~~~-------------------------------~~~~l~- 299 (500)
..|++..... .|+++.|...+.+.. .+...+. +.+.+.
T Consensus 263 ~~L~~~~~~~-~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~ 341 (501)
T 4b63_A 263 HDLQKRYPNS-RTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYL 341 (501)
T ss_dssp HHHHHHSTTC-EEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCc-eEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHh
Confidence 9998764322 399999987654321 1111111 011110
Q ss_pred ---------hCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeeccc------ccCCCccEEeecE
Q 010827 300 ---------ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA------IKGLESQIFEADL 364 (500)
Q Consensus 300 ---------~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~------~~~~~~~~l~~D~ 364 (500)
.....+.++..+..+...... +.+.+..... ...++++++++|.
T Consensus 342 ~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~---------------------~~~~v~~~~~~~~~~~v~~~dg~~~~~D~ 400 (501)
T 4b63_A 342 QRVKNPDETQWQHRILPERKITRVEHHGPQ---------------------SRMRIHLKSSKPESEGAANDVKETLEVDA 400 (501)
T ss_dssp HHHHCSCGGGCSSEEECSEEEEEEECCSSS---------------------SCEEEEEEESCC--------CCCEEEESE
T ss_pred hccCCCcccccceeecCCcceeeeeecCCC---------------------CeEEEEeeeeEEeCCeeEeCCCeEEECCE
Confidence 112356677677666553311 1222211100 0113778999999
Q ss_pred EEEecCCCCCCC-CCCCCCCccCCCCCCCCCceEeCCCcccC-------CCCCEEEecccccccCCCCCCCCchHHHHHH
Q 010827 365 VLWTVGSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVK-------GHPRIFALGDSSALRDSSGRPLPATAQVAFQ 436 (500)
Q Consensus 365 vi~a~G~~p~~~-~~~~~~~~~~~~~~~~~g~i~vd~~~~t~-------~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~ 436 (500)
||+|||++++.+ ++... ...+..+.+|.+.|+..++.. ..++||+.|-+-..+ |-.-+.+...|.+
T Consensus 401 VI~ATGy~~~~p~~L~~~---~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~th---G~~~~~Ls~~a~R 474 (501)
T 4b63_A 401 LMVATGYNRNAHERLLSK---VQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTH---GLSDSLLSVLAVR 474 (501)
T ss_dssp EEECCCEECCTHHHHTGG---GGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHH---CTTTTSSTTHHHH
T ss_pred EEECcCCCCCCcchhcch---hhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccC---CcchhhHHHHHHH
Confidence 999999998843 22111 123556778888888776642 246799999654422 1112444456777
Q ss_pred HHHHHHHHHHHHH
Q 010827 437 QADFAGWNLWAAI 449 (500)
Q Consensus 437 ~g~~aa~~i~~~l 449 (500)
.|.++..-+.+++
T Consensus 475 ~~~I~~~l~g~~~ 487 (501)
T 4b63_A 475 GGEMVQSIFGEQL 487 (501)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcchh
Confidence 6654443333344
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.9e-18 Score=170.79 Aligned_cols=259 Identities=14% Similarity=0.012 Sum_probs=143.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..+||+|||||||||+||++|++. ..|++|+|||+++.++........ ..+...+......++++.++++...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~~---~~~~~~l~~~~~~~~~e~Gv~~~~~ 136 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMRKPAHLFLQELEIPYEDE 136 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCST---TCCCEEEETTTHHHHHHTTCCCEEC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCCc---cCCHHHHHHHHHHHHHHcCCEEEEC
Confidence 347999999999999999999752 159999999999876554332211 1122223344555666667765443
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCcccccc-C--CCChHHHHHHHHHHHHH
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-P--FSTLEDACRVDRKLSEL 234 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~-~--~~~~~~~~~~~~~l~~~ 234 (500)
. ......+.++++++..+..+.++|...... . .+..++.
T Consensus 137 ~----------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------- 178 (326)
T 3fpz_A 137 G----------------------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPP---------- 178 (326)
T ss_dssp S----------------------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESS----------
T ss_pred C----------------------------cceecceeEEEEcchhhhccccccceeecccccceeeccCC----------
Confidence 1 112233334445555555555555431100 0 0000000
Q ss_pred HHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCceEEEE
Q 010827 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCI 314 (500)
Q Consensus 235 ~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~~v~~i 314 (500)
....+++++|||+|.++++.|..+...+.+ ++++.+.......... ... . ..+...
T Consensus 179 -----~~~~~~~v~viggg~~av~~a~~~~~~~~~---v~i~~~~~~~~~~~~~----------~~~-~-----~~~~~~ 234 (326)
T 3fpz_A 179 -----TEKGEVTVAGVVTNWTLVTQAHGTQCAMDP---NVIELAGYKNDGTRDL----------SQK-H-----GVILST 234 (326)
T ss_dssp -----CSSSSCEEEEEEEEEHHHHTCTTSSSCCCC---EEEEESCBCTTSSBCT----------TSC-C-----CEEEEC
T ss_pred -----cccCCCEEEEEccCceeeehhhhhhhccCc---EEEEeecccccccccc----------eee-c-----ceEEEE
Confidence 001257999999999999999887665555 7777765443211100 000 0 011111
Q ss_pred ecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCC
Q 010827 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 394 (500)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g 394 (500)
.... ..+... .....+.+|.++.+.|..+.. ..+ ..+
T Consensus 235 ~g~~-----------------------~~~~~~-------~~~~~~~~~~~~~~~g~~~~~------------~~~-~e~ 271 (326)
T 3fpz_A 235 TGHD-----------------------GPFGAF-------CAKRIVDIDQNQKLGGMKGLD------------MNH-AEH 271 (326)
T ss_dssp CCSC-----------------------SSSCSH-------HHHHHHHHCTTCCCCCCCCBC------------HHH-HHH
T ss_pred ecce-----------------------eeEeec-------ceeEEEecCceeeecceeccc------------ccc-cCC
Confidence 1111 001000 022344566666666665531 111 235
Q ss_pred ceEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 395 QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 395 ~i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
.+.+|..++| +.|+||++||++...+...+ .-.....++.+|+.||+.|.+.|.
T Consensus 272 ~iv~~~~~~t-~vpGv~aaGDaa~~v~g~~r-mGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 272 DVVIHSGAYA-GVDNMYFAGMEVAELDGLNR-MGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHCEECT-TSBTEEECTHHHHHHHTCCB-CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCeEE-CCCCEEEEchHhccccCCCc-CchHHHHHHHHHHHHHHHHHHHhc
Confidence 5777888898 99999999999864221100 011344567899999999998874
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.54 E-value=1.2e-15 Score=154.68 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=38.3
Q ss_pred eC-CCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010827 398 TD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 398 vd-~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
+| .+|+++..|++|+||++.......| -...+.|...|+.|++++.+
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~G---Gynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLG---GYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTT---THHHHHHHHHHHHHHHHHHT
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCC---CHHHHHHHHHHHHHHHHHhc
Confidence 56 7889878999999999998765444 35778899999999998753
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.53 E-value=4.5e-16 Score=161.24 Aligned_cols=228 Identities=14% Similarity=0.048 Sum_probs=119.5
Q ss_pred HHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCCccccccCCCCh
Q 010827 143 FADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTL 221 (500)
Q Consensus 143 ~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G~~~~~~~~~~~ 221 (500)
+.+.+++.+++++.+ .+ .+..+... +.+..+...++ .+.+|.||+|||..+..+.++... ...+-
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~~--------v~Gv~v~~~~g-~~~a~~VVlAtGg~~~~~~~~~~~----~~~tG 190 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDGK--------VTGFVTEKRGL-VEDVDKLVLATGGYSYLYEYSSTQ----STNIG 190 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETTE--------EEEEEETTTEE-ECCCSEEEECCCCCGGGSSSBSSC----TTCSC
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCCE--------EEEEEEEeCCC-eEEeeeEEECCCCCcccCccccCC----CCCch
Confidence 344445668988886 57 77544321 00001222233 577999999999987655443211 11122
Q ss_pred HHHHHHHHH----HHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcch-------
Q 010827 222 EDACRVDRK----LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGN------- 290 (500)
Q Consensus 222 ~~~~~~~~~----l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~------- 290 (500)
+. ..+... +..++--+ ....++++|+| +++++..+...+. +.+..+.+++++.+++..
T Consensus 191 dg-i~~a~~aGa~~~d~e~~q----~~p~~~~~ggg--~~~~ae~~~~~G~----~~v~~~g~rf~~~~~~~~el~~rd~ 259 (472)
T 2e5v_A 191 DG-MAIAFKAGTILADMEFVQ----FHPTVTSLDGE--VFLLTETLRGEGA----QIINENGERFLFNYDKRGELAPRDI 259 (472)
T ss_dssp HH-HHHHHHTTCCEECTTCEE----EEEEEECGGGC--CEECCTHHHHTTC----EEEETTCCCGGGGTCTTGGGSCHHH
T ss_pred HH-HHHHHHcCCCEeCCcceE----EEeEEEccCCC--ceeeehhhcCCce----EEECCCCCCCCccCCcccCcCchhH
Confidence 11 111110 00000000 01134555666 7777766655443 337777788876665543
Q ss_pred -HHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEe-ecEEEEe
Q 010827 291 -REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE-ADLVLWT 368 (500)
Q Consensus 291 -~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~-~D~vi~a 368 (500)
...+.+.+++.+. ++.+.. .- .. +. ..++ .|.++++
T Consensus 260 v~~~i~~~~~~~~~-v~ld~~-----~~------------------------~~--~~----------~~~~~~~~~~~~ 297 (472)
T 2e5v_A 260 LSRAIYIEMLKGHK-VFIDLS-----KI------------------------ED--FE----------RKFPVVAKYLAR 297 (472)
T ss_dssp HHHHHHHHHHHTCC-EEEECT-----TC------------------------TT--HH----------HHCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCc-EEEecc-----ch------------------------HH--HH----------HHhHHHHHHHHH
Confidence 5566666666553 221110 00 00 00 1122 4667788
Q ss_pred cCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCcccCCCCCEEEeccccc-ccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010827 369 VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (500)
Q Consensus 369 ~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t~~~~~vyaiGD~~~-~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 447 (500)
.|..|+ ++++.. .......|.|.||.++|| +.|+|||+|||+. ... |. .++...+..++...++.+..
T Consensus 298 ~G~dp~-~~i~v~-----p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~~h--g~--~rl~~~sl~~~~v~G~~a~~ 366 (472)
T 2e5v_A 298 HGHNYK-VKIPIF-----PAAHFVDGGIRVNIRGES-NIVNLYAIGEVSDSGLH--GA--NRLASNSLLEGLVFGINLPR 366 (472)
T ss_dssp TTCCTT-SCEECE-----EEEEEESCEEECCTTCBC-SSBTEEECGGGEECSSS--TT--SCCTTHHHHHHHHHHHHGGG
T ss_pred hCcCcc-cceEee-----hhhceeCCCeEECCCCcc-ccCCEEecchhcccccC--CC--CCCCcccHHHHHHHHHHHHH
Confidence 899998 544321 112334689999999999 9999999999987 211 11 13444455554444444433
Q ss_pred H
Q 010827 448 A 448 (500)
Q Consensus 448 ~ 448 (500)
.
T Consensus 367 ~ 367 (472)
T 2e5v_A 367 Y 367 (472)
T ss_dssp T
T ss_pred H
Confidence 3
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.41 E-value=5.1e-13 Score=125.00 Aligned_cols=163 Identities=15% Similarity=0.067 Sum_probs=105.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC---------------------C---CCcchHHHHHHHHHh
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---------------------T---GTPGNREAALKVLSA 300 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~---------------------~---~~~~~~~~~~~~l~~ 300 (500)
.+|+|||+|++|+++|..|++.+.+ |+++++...... . ....+...+.+.+++
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 3799999999999999999998776 999998621100 0 011455667788888
Q ss_pred C-CcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcce-eEeecccccCCCccEEeecEEEEecCCCCCCCCC
Q 010827 301 R-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (500)
Q Consensus 301 ~-gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~ 378 (500)
. |++++ ++.++++..++ +.+ .+.+. ++.++.+|.||+|+|...+....
T Consensus 81 ~~gv~i~-~~~v~~i~~~~-----------------------~~v~~v~~~------~g~~i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLEG-----------------------NRVVGVRTW------EGPPARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp CTTEEEE-ECCEEEEEEET-----------------------TEEEEEEET------TSCCEECSEEEECCTTCSSCEEE
T ss_pred CCCcEEE-EeEEEEEEEeC-----------------------CEEEEEEEC------CCCEEECCEEEECCCCChhhcee
Confidence 6 99999 46899987644 333 23332 55689999999999996553211
Q ss_pred CCCC------------------CccCCCCCCCC--------Cc-------eEeC------CCcccCCCCCEEEecccccc
Q 010827 379 EPPN------------------NRLHDLPLNAR--------GQ-------AETD------ETLCVKGHPRIFALGDSSAL 419 (500)
Q Consensus 379 ~~~~------------------~~~~~~~~~~~--------g~-------i~vd------~~~~t~~~~~vyaiGD~~~~ 419 (500)
.... ....++.+... |. ..+. ..+..++.|+||++|||+ .
T Consensus 131 ~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~ 209 (232)
T 2cul_A 131 LGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R 209 (232)
T ss_dssp ETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S
T ss_pred cCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c
Confidence 0000 00001111100 00 0011 012212899999999999 5
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010827 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (500)
Q Consensus 420 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 449 (500)
..+...|+.||+.+|.+|...+
T Consensus 210 --------~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 210 --------EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred --------CccHHHHHHHHHHHHHHHHhhc
Confidence 3477889999999999998875
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.37 E-value=1.4e-11 Score=130.00 Aligned_cols=149 Identities=19% Similarity=0.204 Sum_probs=92.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC-CcccCcc-----------h-h--hhcccc---------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFKPM-----------L-Y--ELLSGE--------- 133 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~~~-----------~-~--~~~~g~--------- 133 (500)
..+||+|||||+||++||..|++ .|.+|+|||++. .+..... + . ..+++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~g 100 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR------MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAG 100 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHE
T ss_pred CcCCEEEECChHHHHHHHHHHHh------CCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcc
Confidence 35899999999999999999999 689999999974 2211100 0 0 000110
Q ss_pred --------------------ccCccccccHHHHhcc-CCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEe
Q 010827 134 --------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192 (500)
Q Consensus 134 --------------------~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~ 192 (500)
.+...+...+.+.+++ .+++++.++|+.+..+... ...|.+.+|..+.+
T Consensus 101 i~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~----------V~GV~t~dG~~I~A 170 (651)
T 3ces_A 101 IQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDR----------VVGAVTQMGLKFRA 170 (651)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSB----------EEEEEETTSEEEEE
T ss_pred cchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCE----------EEEEEECCCCEEEC
Confidence 0000122234455555 5899988899988654331 01356667778999
Q ss_pred cEEEEeCCCCCCCCCCCCccccccCCCChHHHHHHHHHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHhhcCe
Q 010827 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272 (500)
Q Consensus 193 d~lIlAtG~~p~~~~i~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~ 272 (500)
|.||+|||..+..+.++|.... . +.+ +| |.++++++..|.+.+.+
T Consensus 171 d~VVLATGt~s~~~~i~G~~~~-------------~---------------~gr---iG-g~~a~eLA~~L~~lG~~--- 215 (651)
T 3ces_A 171 KAVVLTVGTFLDGKIHIGLDNY-------------S---------------GGR---AG-DPPSIPLSRRLRELPLR--- 215 (651)
T ss_dssp EEEEECCSTTTCCEEECC---------------------------------------------CCHHHHHHHTTTCC---
T ss_pred CEEEEcCCCCccCccccCcccC-------------C---------------CCC---cc-chhhhHHHHHHHhcCCe---
Confidence 9999999998877777775311 0 113 45 77889999999877665
Q ss_pred EEEEe
Q 010827 273 VQAIN 277 (500)
Q Consensus 273 vtlv~ 277 (500)
|+.+.
T Consensus 216 v~~~~ 220 (651)
T 3ces_A 216 VGRLK 220 (651)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66653
No 100
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.28 E-value=7.2e-11 Score=124.03 Aligned_cols=118 Identities=14% Similarity=0.140 Sum_probs=78.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC-CcccCcc-----------h-h--hhcccc----------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFKPM-----------L-Y--ELLSGE---------- 133 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~~~-----------~-~--~~~~g~---------- 133 (500)
.+||+|||||+||++||..|++ .|.+|+|||++. .+..... + . ..+++.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr------~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi 100 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR------MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI 100 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc
Confidence 4899999999999999999999 689999999974 2211100 0 0 001110
Q ss_pred -------------------ccCccccccHHHHhcc-CCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEec
Q 010827 134 -------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193 (500)
Q Consensus 134 -------------------~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d 193 (500)
.+...+...+.+.+++ .+++++..+|+.+..+... ...|.+.+|..+.+|
T Consensus 101 ~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~----------V~GV~t~dG~~i~Ad 170 (637)
T 2zxi_A 101 QFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQ----------VVGVRTNLGVEYKTK 170 (637)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSB----------EEEEEETTSCEEECS
T ss_pred ceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCE----------EEEEEECCCcEEEeC
Confidence 0001122234455555 4899988899988654331 013666778899999
Q ss_pred EEEEeCCCCCCCCCCCCcc
Q 010827 194 WLVLSLGAEPKLDVVPGAA 212 (500)
Q Consensus 194 ~lIlAtG~~p~~~~i~G~~ 212 (500)
.||+|||..+..+.++|..
T Consensus 171 aVVLATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 171 AVVVTTGTFLNGVIYIGDK 189 (637)
T ss_dssp EEEECCTTCBTCEEEETTE
T ss_pred EEEEccCCCccCceeccce
Confidence 9999999988777777753
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.18 E-value=6.4e-11 Score=105.85 Aligned_cols=108 Identities=24% Similarity=0.214 Sum_probs=77.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccc---cccCccccccHHHHhccCCcEEEE
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSG---EVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
++|+|||||++|+++|..|++ .|.+|+|+|+.+............++ ......+...+.+.+++.+++++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~------~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~ 75 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR------AGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRP 75 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 689999999999999999999 68899999998743221100000011 111234455566777788999998
Q ss_pred eeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
+++++++.+.. .+.+.++++ .+.+|.||+|+|..|..
T Consensus 76 ~~v~~i~~~~~-----------~~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 76 GVVKGVRDMGG-----------VFEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CCCCEEEECSS-----------SEEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred CEEEEEEEcCC-----------EEEEEECCC-EEEECEEEECCCCCCCc
Confidence 88888876433 135777777 89999999999998743
No 102
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.14 E-value=6.9e-11 Score=124.58 Aligned_cols=118 Identities=17% Similarity=0.222 Sum_probs=75.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC-CcccC---cc---------hh--hhcccc--------
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFK---PM---------LY--ELLSGE-------- 133 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~---~~---------~~--~~~~g~-------- 133 (500)
...+||+|||||+||++||..|++ .|.+|+|+|+.. .+... +. .. ..+.+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~ 92 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVAR------GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDAT 92 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHH------CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhc
Confidence 345899999999999999999999 689999999974 12111 00 00 000110
Q ss_pred ---------------------ccCccccccHHHHhcc-CCcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEE
Q 010827 134 ---------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVE 191 (500)
Q Consensus 134 ---------------------~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ 191 (500)
.+...+...+.+.+++ .+++++.++|+.+..+... + ..+.+.+|..+.
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~------V----~GV~t~~G~~i~ 162 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGK------F----SSVTVRSGRAIQ 162 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTE------E----EEEEETTSCEEE
T ss_pred CCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCE------E----EEEEECCCcEEE
Confidence 0000122234455555 3899988888887654321 0 125666778999
Q ss_pred ecEEEEeCCCCCCCCCCCC
Q 010827 192 YDWLVLSLGAEPKLDVVPG 210 (500)
Q Consensus 192 ~d~lIlAtG~~p~~~~i~G 210 (500)
+|.||+|||..+..+.++|
T Consensus 163 Ad~VVLATG~~s~~~i~~G 181 (641)
T 3cp8_A 163 AKAAILACGTFLNGLIHIG 181 (641)
T ss_dssp EEEEEECCTTCBTCEEEET
T ss_pred eCEEEECcCCCCCccceee
Confidence 9999999999876544444
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.13 E-value=3e-11 Score=123.49 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=68.5
Q ss_pred CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEE
Q 010827 287 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (500)
Q Consensus 287 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi 366 (500)
...+...+...+++.| +|++++.|++|+.++ +++.+.+. +++++.+|.||
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vi 252 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSG-----------------------DVVNVTVK------DGHAFQAHSVI 252 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSS-----------------------SSEEEEET------TSCCEEEEEEE
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcC-----------------------CeEEEEEC------CCCEEEeCEEE
Confidence 3445566666677778 999999999998765 56777643 55679999999
Q ss_pred EecC--------CCCCCCCCCCCCCccCCCC-CCCCCceEeCCCcccCCCCCEEEecccc
Q 010827 367 WTVG--------SKPLLPHVEPPNNRLHDLP-LNARGQAETDETLCVKGHPRIFALGDSS 417 (500)
Q Consensus 367 ~a~G--------~~p~~~~~~~~~~~~~~~~-~~~~g~i~vd~~~~t~~~~~vyaiGD~~ 417 (500)
+|+| +.|+.+...... +. +.....+.|+..+++ ..+++|+.||+.
T Consensus 253 ~a~~~~~l~~i~~~p~l~~~~~~~-----~~~~~~~~~~kv~~~~~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 253 VATPMNTWRRIVFTPALPERRRSV-----IEEGHGGQGLKILIHVRG-AEAGIECVGDGI 306 (431)
T ss_dssp ECSCGGGGGGSEEESCCCHHHHHH-----HHHCCCCCEEEEEEEEES-CCTTEEEEBSSS
T ss_pred EecCcchHhheeeCCCCCHHHHHH-----HHhCCCcceEEEEEEECC-CCcCceEcCCCC
Confidence 9999 778755322110 11 123345889999998 789999999983
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.98 E-value=1e-09 Score=102.31 Aligned_cols=115 Identities=24% Similarity=0.249 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccc----c----c------cCccccccHH
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSG----E----V------DAWEIAPRFA 144 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g----~----~------~~~~~~~~~~ 144 (500)
.+||+|||||++|+++|..|++ .|.+|+|||+..........+. ..+ . + ....+...+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~------~g~~v~lie~~~~~~G~~~~~~-~~~~~~~~~~~~~~d~~g~~~~~~~~~l~ 75 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ------KGVRVGLLTQSLDAVMMPFLPP-KPPFPPGSLLERAYDPKDERVWAFHARAK 75 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSCC-CSCCCTTCHHHHHCCTTCCCHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCcCCcccCcc-ccccchhhHHhhhccCCCCCHHHHHHHHH
Confidence 4899999999999999999999 6899999999732111100000 000 0 0 1112334455
Q ss_pred HHhccC-CcEEEEeeEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCCCC
Q 010827 145 DLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPG 210 (500)
Q Consensus 145 ~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i~G 210 (500)
+.+++. +++++..+|+++..+... .+.+.+.++..+.+|+||+|+|........+|
T Consensus 76 ~~~~~~~gv~i~~~~v~~i~~~~~~----------v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 76 YLLEGLRPLHLFQATATGLLLEGNR----------VVGVRTWEGPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHTCTTEEEEECCEEEEEEETTE----------EEEEEETTSCCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHcCCCcEEEEeEEEEEEEeCCE----------EEEEEECCCCEEECCEEEECCCCChhhceecC
Confidence 666665 899887788888654321 01356667778999999999998755433444
No 105
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.97 E-value=5.1e-10 Score=107.78 Aligned_cols=182 Identities=15% Similarity=0.081 Sum_probs=109.8
Q ss_pred cEEEEECCChhHHHHHHHHHHH-HhhcCeEEEEecCCccCCC--------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTICPT-------------------------------------- 285 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~-~~~~~~vtlv~~~~~~~~~-------------------------------------- 285 (500)
.+|+|||+|.+|+.+|..|++. +.+ |+++++.+.+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 116 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVK 116 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEec
Confidence 4899999999999999999985 555 9999987654211
Q ss_pred CCcchHHHHHHHHHh-CCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeec----cc-c-cCCCcc
Q 010827 286 GTPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ----PA-I-KGLESQ 358 (500)
Q Consensus 286 ~~~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~----~~-~-~~~~~~ 358 (500)
....+...+.+.+.+ .||+++.++.++++..+++.. .++.+... +. . ..++..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v--------------------~gv~~~~~~~~~~~~~g~~g~~~ 176 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRV--------------------GGVVTNWALVAQNHHTQSCMDPN 176 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEE--------------------EEEEEEEHHHHTCTTTSSCCCCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeE--------------------EEEEEeccccccccCccccCceE
Confidence 011223344555654 699999999999998644111 12333210 00 0 001346
Q ss_pred EEeecEEEEecCCCCCCCCCCCCCCccCC--CCCCCCCceEeCC-------CcccCCCCCEEEecccccccCCCCCCCCc
Q 010827 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHD--LPLNARGQAETDE-------TLCVKGHPRIFALGDSSALRDSSGRPLPA 429 (500)
Q Consensus 359 ~l~~D~vi~a~G~~p~~~~~~~~~~~~~~--~~~~~~g~i~vd~-------~~~t~~~~~vyaiGD~~~~~~~~~~~~~~ 429 (500)
++.+|.||+|+|..++............+ +.+.....+.++. ..++ ..|++|++||++.......+. ..
T Consensus 177 ~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~g~~~~-gp 254 (284)
T 1rp0_A 177 VMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEIDGAPRM-GP 254 (284)
T ss_dssp EEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHHTCEEC-CS
T ss_pred EEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhcCCCCc-Ch
Confidence 79999999999987763221000000000 1111222232331 2344 679999999997532111111 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHCC
Q 010827 430 TAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 430 ~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
+...+..+|+.+|.+|...|..
T Consensus 255 ~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 255 TFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhHHHHHHHHHHHhhh
Confidence 4667889999999999998864
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.86 E-value=4.2e-09 Score=106.87 Aligned_cols=108 Identities=23% Similarity=0.311 Sum_probs=71.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc---------------chhhhcc-----------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP---------------MLYELLS----------- 131 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~---------------~~~~~~~----------- 131 (500)
..+||+|||||+||++||..|++ .|++|+|+|+.+...... ....+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~------~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGK------RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 45799999999999999999999 689999999987532111 0000000
Q ss_pred -----------------------cc----ccCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEE
Q 010827 132 -----------------------GE----VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVL 183 (500)
Q Consensus 132 -----------------------g~----~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~ 183 (500)
+. .....+...+.+.+++.+++++.+ +|+.+..+.. .+.+.
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-----------~~~V~ 168 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-----------GFRVT 168 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-----------EEEEE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-----------EEEEE
Confidence 00 000122233445556668998885 7888865433 13577
Q ss_pred cCCccEEEecEEEEeCCCCC
Q 010827 184 LESGLIVEYDWLVLSLGAEP 203 (500)
Q Consensus 184 ~~~g~~~~~d~lIlAtG~~p 203 (500)
+.++ .+.+|+||+|||..+
T Consensus 169 ~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 169 TSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp ETTE-EEEESEEEECCCCSS
T ss_pred ECCc-EEEeeEEEECCCCcc
Confidence 7777 899999999999875
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.81 E-value=1.3e-09 Score=113.56 Aligned_cols=40 Identities=33% Similarity=0.527 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
+|+|||||||++||+||.+|++ +|++|+|+|+++..+...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~------~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA------AGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH------TTCCEEEECCC-------
T ss_pred CCCEEEECCcHHHHHHHHHHHH------CCCcEEEEccCCCCCCcE
Confidence 4899999999999999999999 799999999999876543
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.76 E-value=1.4e-08 Score=105.57 Aligned_cols=120 Identities=19% Similarity=0.234 Sum_probs=76.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc---hh---hh---cc-----cc--------c
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM---LY---EL---LS-----GE--------V 134 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~---~~---~~---~~-----g~--------~ 134 (500)
...++|+|||||++||++|..|++ .|++|+|||+.+.+..... .. .. ++ +. .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~------~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 163 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL------LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHI 163 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEE
T ss_pred cCCCCEEEECccHHHHHHHHHHHH------CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccC
Confidence 456899999999999999999999 6899999999876432110 00 00 00 00 0
Q ss_pred cCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEc--C-Cc--cEEEecEEEEeCCCCCCCCCC
Q 010827 135 DAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL--E-SG--LIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~--~-~g--~~~~~d~lIlAtG~~p~~~~i 208 (500)
....+...+.+.+++.+++++.+ +|+.+..+... .. .+.+.+ . ++ ..+.+|+||+|+|..+....+
T Consensus 164 ~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~---~~-----~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~ 235 (497)
T 2bry_A 164 SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRK---GS-----GWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 235 (497)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCST---TC-----CBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCC---CC-----EEEEEEEECCCCCEEEEEcCEEEECCCCCcccccc
Confidence 11222334455566678999886 88888753210 00 124544 3 55 478999999999998765444
Q ss_pred CC
Q 010827 209 PG 210 (500)
Q Consensus 209 ~G 210 (500)
.+
T Consensus 236 ~~ 237 (497)
T 2bry_A 236 TI 237 (497)
T ss_dssp EE
T ss_pred cc
Confidence 33
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.76 E-value=1.8e-08 Score=105.30 Aligned_cols=47 Identities=6% Similarity=-0.048 Sum_probs=41.7
Q ss_pred eEeCCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 396 AETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 396 i~vd~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
|..|+.+++.+.+++|.|||++.+ ...+..|..+|-.+|+.|...+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~--------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGY--------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTS--------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCCh--------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 567788998789999999999997 67888999999999999988775
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.75 E-value=1.8e-08 Score=101.04 Aligned_cols=106 Identities=24% Similarity=0.321 Sum_probs=70.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcc-----------h------hhhcc---------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-----------L------YELLS--------- 131 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~-----------~------~~~~~--------- 131 (500)
..++|+|||||++|+++|..|++ .|++|+|||+.+....... + .....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~------~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 83 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ------NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYE 83 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceE
Confidence 35899999999999999999999 6899999999865421100 0 00000
Q ss_pred ----cc--------------ccCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEe
Q 010827 132 ----GE--------------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192 (500)
Q Consensus 132 ----g~--------------~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~ 192 (500)
|. .....+...+.+.+.+.+++++.+ +|+.++.+ + .+++.++..+.+
T Consensus 84 ~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~-~v~~~~g~~~~a 149 (379)
T 3alj_A 84 TWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPV-------------G-RLTLQTGEVLEA 149 (379)
T ss_dssp EEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETT-------------T-EEEETTSCEEEC
T ss_pred EEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeC-------------C-EEEECCCCEEEc
Confidence 00 000111223444555568888876 78888641 2 466677788999
Q ss_pred cEEEEeCCCCC
Q 010827 193 DWLVLSLGAEP 203 (500)
Q Consensus 193 d~lIlAtG~~p 203 (500)
|.||.|+|...
T Consensus 150 d~vV~AdG~~s 160 (379)
T 3alj_A 150 DLIVGADGVGS 160 (379)
T ss_dssp SEEEECCCTTC
T ss_pred CEEEECCCccH
Confidence 99999999864
No 111
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=6.7e-08 Score=98.26 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=45.6
Q ss_pred CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEE
Q 010827 287 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (500)
Q Consensus 287 ~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi 366 (500)
...+.+.+.+.+++.|++|++++.|++|..++ +++ +. .+++++.+|.||
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~v-V~-------~~g~~~~ad~Vv 236 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE-----------------------KKV-YT-------RDNEEYSFDVAI 236 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-----------------------TEE-EE-------TTCCEEECSEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-----------------------CEE-EE-------eCCcEEEeCEEE
Confidence 35677888899999999999999999998765 556 43 256789999999
Q ss_pred EecCCCC
Q 010827 367 WTVGSKP 373 (500)
Q Consensus 367 ~a~G~~p 373 (500)
+|+|...
T Consensus 237 ~a~~~~~ 243 (421)
T 3nrn_A 237 SNVGVRE 243 (421)
T ss_dssp ECSCHHH
T ss_pred ECCCHHH
Confidence 9998653
No 112
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.71 E-value=4.3e-08 Score=94.20 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
.+||+|||||++|+++|..|++. +|++|+|+|+.+..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSP 75 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSC
T ss_pred ccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCC
Confidence 47999999999999999999982 28999999998754
No 113
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.69 E-value=3.7e-08 Score=99.44 Aligned_cols=109 Identities=20% Similarity=0.261 Sum_probs=70.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-----------------chhhh------------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYEL------------ 129 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-----------------~~~~~------------ 129 (500)
.+||+|||||++|+++|..|++ .|++|+|||+.+...... .....
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~------~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR------QGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELE 79 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEE
Confidence 4799999999999999999999 689999999976431000 00000
Q ss_pred --cccc----cc--------------CccccccHHHHhccC-CcEEEEe-eEEEEecCCCCCCCCCceeecCc--EEEcC
Q 010827 130 --LSGE----VD--------------AWEIAPRFADLLANT-GVQFFKD-RVKLLCPSDHLGVNGPMACTHGG--TVLLE 185 (500)
Q Consensus 130 --~~g~----~~--------------~~~~~~~~~~~~~~~-~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~--~v~~~ 185 (500)
..|. .. ...+...+.+.+.+. +++++.+ +|+.++.+... . .+++.
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-----------v~g~v~~~ 148 (399)
T 2x3n_A 80 VYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-----------AIDQVRLN 148 (399)
T ss_dssp EEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-----------CEEEEEET
T ss_pred EeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-----------eEEEEEEC
Confidence 0010 00 001112234445555 7888875 88888765431 3 46667
Q ss_pred CccEEEecEEEEeCCCCCC
Q 010827 186 SGLIVEYDWLVLSLGAEPK 204 (500)
Q Consensus 186 ~g~~~~~d~lIlAtG~~p~ 204 (500)
+|..+.+|.||.|+|....
T Consensus 149 ~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 149 DGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp TSCEEEEEEEEECCCTTCH
T ss_pred CCCEEECCEEEECCCCChH
Confidence 7878999999999997643
No 114
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.66 E-value=4.6e-07 Score=89.87 Aligned_cols=60 Identities=17% Similarity=0.094 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEE
Q 010827 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 367 (500)
Q Consensus 288 ~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~ 367 (500)
..+...+.+.+++.|++++++++|+++..+++ +.+.+.+. +++..++.+|.||+
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~----~g~~~~~~a~~VV~ 203 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE----------------------GGFELDFG----GAEPMTLSCRVLIN 203 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT----------------------SSEEEEEC----TTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC----------------------ceEEEEEC----CCceeEEEeCEEEE
Confidence 45677788889999999999999999987542 22555542 11235899999999
Q ss_pred ecCCCC
Q 010827 368 TVGSKP 373 (500)
Q Consensus 368 a~G~~p 373 (500)
|+|...
T Consensus 204 A~G~~s 209 (369)
T 3dme_A 204 AAGLHA 209 (369)
T ss_dssp CCGGGH
T ss_pred CCCcch
Confidence 999754
No 115
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.64 E-value=3.2e-08 Score=99.12 Aligned_cols=37 Identities=22% Similarity=0.333 Sum_probs=33.3
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
....+||+|||||++|+++|++|++ +|++|+|||+.+
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~------~G~~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAK------ENKNTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCC
Confidence 3455899999999999999999999 799999999975
No 116
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.63 E-value=4.3e-08 Score=99.21 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=32.8
Q ss_pred CCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 75 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+++||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~------~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQ------SGIDCDVYEAVKE 57 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCC
Confidence 34556899999999999999999999 7999999999864
No 117
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.63 E-value=1e-07 Score=96.25 Aligned_cols=40 Identities=23% Similarity=0.275 Sum_probs=34.0
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 74 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
|..+..++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQ------NGIDVSVYERDND 60 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHT------TTCEEEEEECSSS
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 333456899999999999999999999 6899999999864
No 118
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.62 E-value=5.5e-08 Score=99.77 Aligned_cols=110 Identities=21% Similarity=0.364 Sum_probs=71.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-----------------chhhhcc---------
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYELLS--------- 131 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-----------------~~~~~~~--------- 131 (500)
+.+||+|||||++|+++|..|++ .|++|+|+|+.+...... .+...+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~------~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAE------EGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSA 98 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHH
Confidence 45899999999999999999999 689999999987432100 0000000
Q ss_pred -------------------------cccc-----CccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCc
Q 010827 132 -------------------------GEVD-----AWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGG 180 (500)
Q Consensus 132 -------------------------g~~~-----~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~ 180 (500)
+..- ...+...+.+.+++.+++++.+ +|+++..+... .+
T Consensus 99 ~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~----------v~ 168 (447)
T 2i0z_A 99 FSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQ----------TK 168 (447)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE----------EE
T ss_pred HHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCc----------EE
Confidence 0000 0112223445555678988875 78887643220 02
Q ss_pred EEEcCCccEEEecEEEEeCCCCC
Q 010827 181 TVLLESGLIVEYDWLVLSLGAEP 203 (500)
Q Consensus 181 ~v~~~~g~~~~~d~lIlAtG~~p 203 (500)
.+.+.++..+.+|.||+|+|...
T Consensus 169 ~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 169 AVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEEETTCCEEECSCEEECCCCSS
T ss_pred EEEECCCCEEECCEEEECCCCCc
Confidence 46677776799999999999875
No 119
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.62 E-value=2e-07 Score=94.73 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=34.3
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
+||+|||||.+||+||++|++ +|++|+|+|+++..+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~------~G~~V~vlE~~~~~GG~ 38 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK------AGHEVEVFERLPITGGR 38 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH------TTCEEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHh------CCCceEEEeCCCCCCCc
Confidence 489999999999999999999 78999999999876544
No 120
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.57 E-value=1.5e-07 Score=94.59 Aligned_cols=100 Identities=24% Similarity=0.231 Sum_probs=76.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||+|+.|+++|..|++ .|.+|+++|+.+.+.. ......+...+.+.+++.+++++.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~~~----------~~~~~~~~~~l~~~l~~~gv~i~~~~ 208 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS------GGYQLDVVAPCEQVMP----------GLLHPAAAKAVQAGLEGLGVRFHLGP 208 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSST----------TTSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCcchhh----------cccCHHHHHHHHHHHHHcCCEEEeCC
Confidence 6899999999999999999999 5889999999876311 1112334455667777889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++.+... ..+.++++..+.+|.||+|+|.+|..
T Consensus 209 ~v~~i~~~~~~-----------~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 209 VLASLKKAGEG-----------LEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECC
T ss_pred EEEEEEecCCE-----------EEEEECCCCEEECCEEEECcCCCcCH
Confidence 78888654321 25667788899999999999988764
No 121
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.57 E-value=6.2e-08 Score=98.38 Aligned_cols=110 Identities=20% Similarity=0.158 Sum_probs=69.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc------Ccc----hh------hhc------------
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------KPM----LY------ELL------------ 130 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~------~~~----~~------~~~------------ 130 (500)
.+||+|||||++|+++|..|++ .|++|+|+|+.+.... .+. +. ...
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~------~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 78 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK------SGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKF 78 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEE
Confidence 3799999999999999999999 7899999999852110 000 00 000
Q ss_pred --ccc-------------------ccCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCcc
Q 010827 131 --SGE-------------------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGL 188 (500)
Q Consensus 131 --~g~-------------------~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~ 188 (500)
.+. .....+...+.+.+.+.+++++.+ +|+.+...... .. ..+.+.+|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~------~~---v~v~~~~g~ 149 (421)
T 3nix_A 79 VRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTD------SV---TTIEDINGN 149 (421)
T ss_dssp EETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTE------EE---EEEEETTSC
T ss_pred EeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE------EE---EEEEcCCCC
Confidence 000 000011122344455568999886 88888654321 00 134556776
Q ss_pred --EEEecEEEEeCCCCC
Q 010827 189 --IVEYDWLVLSLGAEP 203 (500)
Q Consensus 189 --~~~~d~lIlAtG~~p 203 (500)
++.+|.||.|+|...
T Consensus 150 ~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 150 KREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEEEEECCGGGC
T ss_pred EEEEEcCEEEECCCCch
Confidence 699999999999764
No 122
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.56 E-value=1.3e-07 Score=100.23 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=33.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++.+||+|||||+||+++|..|++ .|++|+|||+.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar------~G~~V~LiEr~~ 56 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK------LGHDVTIYERSA 56 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc------CCCCEEEEcCCC
Confidence 446899999999999999999999 689999999985
No 123
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.56 E-value=9.4e-08 Score=99.83 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~------~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM------RGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCCEEEEccCC
Confidence 4799999999999999999998 799999999986
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.55 E-value=2.1e-07 Score=93.91 Aligned_cols=36 Identities=31% Similarity=0.488 Sum_probs=32.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD------AGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCC
Confidence 35799999999999999999999 6999999999865
No 125
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.55 E-value=1.4e-07 Score=92.66 Aligned_cols=35 Identities=37% Similarity=0.480 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
++||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~------~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH------CCCcEEEEECCCC
Confidence 3799999999999999999999 6899999999864
No 126
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.55 E-value=2e-07 Score=95.65 Aligned_cols=103 Identities=14% Similarity=0.206 Sum_probs=76.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++++|||||++|+++|..|++ .|.+|+++|+.+.+... ....++...+.+.+++.+++++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i~~~ 211 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK------AGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITIATG 211 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEEEcC
Confidence 46899999999999999999998 68899999998763211 111234455667777889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i 208 (500)
.+.+++.+.+. ..+.+ ++..+.+|.||+|+|.+|..+.+
T Consensus 212 ~~v~~i~~~~~v-----------~~v~~-~~~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 212 ETVERYEGDGRV-----------QKVVT-DKNAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp CCEEEEECSSBC-----------CEEEE-SSCEEECSEEEECSCEEESCGGG
T ss_pred CEEEEEEccCcE-----------EEEEE-CCCEEECCEEEECcCCCCChHHH
Confidence 78888765321 12444 34689999999999988875433
No 127
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.54 E-value=1.1e-07 Score=99.54 Aligned_cols=40 Identities=23% Similarity=0.419 Sum_probs=36.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
.+||+|||||++||+||..|++ .|++|+|+|++++.+...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~------~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD------SGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCce
Confidence 4789999999999999999999 689999999999876654
No 128
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.54 E-value=5.7e-08 Score=97.41 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
+.+||+||||||||+++|..|++ .|++|+|||+.+.+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~------~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 35899999999999999999999 79999999997643
No 129
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.53 E-value=1.9e-07 Score=92.16 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=31.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
+||+|||||++|+++|+.|++.. .+|++|+|||+++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~---~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT---SGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC----CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc---cCCceEEEEECCCCC
Confidence 68999999999999999998821 158899999998643
No 130
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.52 E-value=4.6e-08 Score=101.72 Aligned_cols=159 Identities=14% Similarity=0.078 Sum_probs=99.8
Q ss_pred EecEEEEeCCCCCCCCCCCCcc-ccccCCCChHHHHHHH-HHHHHHHHhccCCCCccEEEEECCChhHHHHHHHHHHHHh
Q 010827 191 EYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD-RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (500)
Q Consensus 191 ~~d~lIlAtG~~p~~~~i~G~~-~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~k~V~VvGgG~~g~e~A~~l~~~~~ 268 (500)
.||.+++++|++|..+++++.+ +.+.......+...+. ..+..............+|+|||||++|+.+|..|++.+.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 4688999999998766655542 2233333444443331 1111000000111235799999999999999999999876
Q ss_pred hcCeEEEEecCCccCCC----CC-----------------------------cchHHHHHHHHHhCCcEEEcCceEEEEe
Q 010827 269 EKGIVQAINVETTICPT----GT-----------------------------PGNREAALKVLSARKVQLVLGYFVRCIR 315 (500)
Q Consensus 269 ~~~~vtlv~~~~~~~~~----~~-----------------------------~~~~~~~~~~l~~~gV~i~~~~~v~~i~ 315 (500)
+ |+++++.+.+... .. ..+.+.+.+.+++.||+++.++.|+++.
T Consensus 117 ~---V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~ 193 (497)
T 2bry_A 117 R---VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQ 193 (497)
T ss_dssp E---EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEE
T ss_pred e---EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 6 9999987654311 00 2344556677788899999999999998
Q ss_pred cCccccccccCCCCCcccccccccCCcceeEeecccccCCCc--cEEeecEEEEecCCCCCC
Q 010827 316 RVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--QIFEADLVLWTVGSKPLL 375 (500)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~~l~~D~vi~a~G~~p~~ 375 (500)
.+++.. +.+.+.+. ...++ .++.+|.||.|+|..+..
T Consensus 194 ~~~~~~--------------------~~~~v~~~---~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 194 PPPRKG--------------------SGWRAQLQ---PNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CCCSTT--------------------CCBEEEEE---SCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred EecCCC--------------------CEEEEEEE---ECCCCCEEEEEcCEEEECCCCCccc
Confidence 632100 23444432 11023 568999999999998764
No 131
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.51 E-value=1.8e-07 Score=96.12 Aligned_cols=101 Identities=21% Similarity=0.374 Sum_probs=76.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||++|+++|..|++ .|.+|+++|+.+.+. +. ....+...+.+.+++.+++++.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~------~g~~V~lv~~~~~~l---------~~--~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHR------LGAEVIVLEYMDRIL---------PT--MDLEVSRAAERVFKKQGLTIRTGV 229 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC---------TT--SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCEEEEEecCCccc---------cc--cCHHHHHHHHHHHHHCCCEEEECC
Confidence 5799999999999999999998 588999999987631 10 11233344566677789999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~ 207 (500)
+|++++...+. ..+.++++..+.+|.||+|+|.+|..+.
T Consensus 230 ~V~~i~~~~~~-----------v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 230 RVTAVVPEAKG-----------ARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred EEEEEEEeCCE-----------EEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 88888754331 1455557778999999999999887643
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.51 E-value=2.7e-07 Score=99.78 Aligned_cols=35 Identities=31% Similarity=0.373 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+||+|||||++|+++|+.|++ +|++|+|||+.+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~------~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLR------RGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCC
Confidence 44899999999999999999999 799999999964
No 133
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.51 E-value=3e-07 Score=93.15 Aligned_cols=96 Identities=26% Similarity=0.322 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. ......+...+.+.+++.+++++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~l~~~GV~i~~~~ 208 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART------AGVHVSLVETQPRLMS----------RAAPATLADFVARYHAAQGVDLRFER 208 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSST----------TTSCHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCcccc----------cccCHHHHHHHHHHHHHcCcEEEeCC
Confidence 5899999999999999999998 6889999999876321 1111233445667777889999997
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++ +. .+.+.++..+.+|.||+|+|.+|..
T Consensus 209 ~v~~i~-~~--------------~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 209 SVTGSV-DG--------------VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp CEEEEE-TT--------------EEEETTSCEEECSEEEECSCEEECC
T ss_pred EEEEEE-CC--------------EEEECCCCEEEcCEEEECcCCCccH
Confidence 888886 21 3666788899999999999988764
No 134
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.49 E-value=2.8e-08 Score=106.00 Aligned_cols=38 Identities=26% Similarity=0.153 Sum_probs=33.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~ 121 (500)
..+||+|||||++|+++|..|++ +|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~------~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVG------AGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHh------CCCcEEEEeccCCCC
Confidence 35799999999999999999999 799999999987654
No 135
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.49 E-value=8.9e-08 Score=96.27 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||+|||||++|+++|..|++ .|++|+|+|+.+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~------~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 4799999999999999999999 7999999999874
No 136
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.49 E-value=2e-07 Score=94.49 Aligned_cols=100 Identities=24% Similarity=0.301 Sum_probs=77.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+.+.. ......+...+.+.+++.+++++.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtvv~~~~~~l~----------~~~~~~~~~~l~~~l~~~GV~i~~~~ 206 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARK------LGLSVTILEAGDELLV----------RVLGRRIGAWLRGLLTELGVQVELGT 206 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSH----------HHHCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCccch----------hhcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5899999999999999999998 5889999999876321 1011233445667777889999975
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.++..+.+. ..+.+.+++.+.+|.||+|+|.+|..
T Consensus 207 ~v~~i~~~~~~-----------~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 207 GVVGFSGEGQL-----------EQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp CEEEEECSSSC-----------CEEEETTSCEEECSEEEECSCEEECC
T ss_pred EEEEEeccCcE-----------EEEEECCCCEEEcCEEEEeeCCeecH
Confidence 88888765431 25778888899999999999998764
No 137
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.49 E-value=1.7e-07 Score=94.29 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK------AGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH------HTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 3789999999999999999999 6899999999763
No 138
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.48 E-value=2.1e-07 Score=98.30 Aligned_cols=109 Identities=21% Similarity=0.209 Sum_probs=67.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-----------------chh----------hh-
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLY----------EL- 129 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-----------------~~~----------~~- 129 (500)
+.+||+||||||+||++|..|++ .|++|+|||+.+...... .+. ..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~------~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA------GGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH------TTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce
Confidence 45799999999999999999999 799999999976321000 000 00
Q ss_pred cccc----ccCc---------------cccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEc--CCc
Q 010827 130 LSGE----VDAW---------------EIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL--ESG 187 (500)
Q Consensus 130 ~~g~----~~~~---------------~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~--~~g 187 (500)
..+. .... .+...+.+.+.+.+++++.+ +|+.+..+... ..+++ .++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-----------v~v~~~~~~G 190 (570)
T 3fmw_A 122 FAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-----------VEVTVAGPSG 190 (570)
T ss_dssp BTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-----------EEEEEEETTE
T ss_pred eCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-----------EEEEEEeCCC
Confidence 0110 0000 01112334444558888776 88888655431 24444 567
Q ss_pred -cEEEecEEEEeCCCCC
Q 010827 188 -LIVEYDWLVLSLGAEP 203 (500)
Q Consensus 188 -~~~~~d~lIlAtG~~p 203 (500)
.++.+|+||.|.|...
T Consensus 191 ~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 191 PYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEEEEESEEEECSCSSC
T ss_pred cEEEEeCEEEEcCCCCc
Confidence 6899999999999764
No 139
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.47 E-value=2.8e-07 Score=94.16 Aligned_cols=36 Identities=31% Similarity=0.370 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
..+||||||||++|+++|++|++ +|+ +|+|+|+.+.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~------~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLAR------RGYTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------cCCCcEEEEeCCCC
Confidence 35899999999999999999999 789 9999999863
No 140
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.47 E-value=3e-07 Score=92.02 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|++|++ +|++|+|||+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~------~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK------RGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCC
Confidence 4799999999999999999999 789999999974
No 141
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.45 E-value=5.6e-07 Score=91.31 Aligned_cols=101 Identities=18% Similarity=0.266 Sum_probs=77.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+.+.. ......+...+.+.+++.+++++.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~l~----------~~~~~~~~~~l~~~l~~~GV~i~~~~ 215 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK------FGVNVTLLEALPRVLA----------RVAGEALSEFYQAEHRAHGVDLRTGA 215 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTT----------TTSCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCeEEEEecCCchhh----------hhcCHHHHHHHHHHHHhCCCEEEECC
Confidence 6899999999999999999999 6889999999876321 1112334455667778889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.++..+... ...+.+++++.+.+|.||+|+|.+|..
T Consensus 216 ~v~~i~~~~~~----------v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 216 AMDCIEGDGTK----------VTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp CEEEEEESSSB----------EEEEEESSSCEEECSEEEECSCCEESC
T ss_pred EEEEEEecCCc----------EEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 88888764321 014777888899999999999998764
No 142
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.44 E-value=1.9e-07 Score=93.05 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||+|||||++|+++|++|++ +|++|+|+|+.+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~------~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR------AGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH------TTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCC
Confidence 3799999999999999999999 7899999999753
No 143
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.44 E-value=3.7e-07 Score=96.65 Aligned_cols=36 Identities=17% Similarity=0.403 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
.+||||||||+|||+||..|++ +|++|+|||+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~------~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD------SGAKVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 5799999999999999999999 78999999998754
No 144
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.44 E-value=1.1e-07 Score=94.96 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=31.3
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+++|+|||||++|+++|++|++ |++|+|+|+++
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~-------G~~V~vlE~~~ 41 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSA-------HGRVVVLEREA 41 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhC-------CCCEEEEECCC
Confidence 345899999999999999999974 78999999985
No 145
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.43 E-value=5.4e-07 Score=97.50 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+||+|||||++|+++|+.|++ +|++|+|||+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~------~G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQR------RGAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHT------TTCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCcEEEEeCCC
Confidence 35899999999999999999999 799999999964
No 146
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.43 E-value=5.6e-07 Score=91.93 Aligned_cols=95 Identities=15% Similarity=0.300 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||||+.|+++|..+++ .|.+|+|+++.+.+. .. ...++...+.+.+++.+++++.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~ll----------~~-~d~~~~~~~~~~l~~~gV~i~~~~ 209 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE------RGLHPTLIHRSDKIN----------KL-MDADMNQPILDELDKREIPYRLNE 209 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCEEEEEESSSCCS----------TT-SCGGGGHHHHHHHHHTTCCEEESC
T ss_pred CcEEEEECCccchhhhHHHHHh------cCCcceeeeeecccc----------cc-ccchhHHHHHHHhhccceEEEecc
Confidence 5689999999999999999999 578999999987632 11 12344556777888889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
++..++.. .+.+++++.+.+|.|++|+|.+|+.
T Consensus 210 ~v~~~~~~---------------~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 210 EINAINGN---------------EITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp CEEEEETT---------------EEEETTSCEEECSEEEECCCEEESC
T ss_pred EEEEecCC---------------eeeecCCeEEeeeeEEEEeceecCc
Confidence 77777543 5778889999999999999988864
No 147
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.43 E-value=4.8e-07 Score=93.23 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=74.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
+++|+|||||+.|+++|..|++ .|.+|+|+|+.+.+.. . ...++...+.+.+++.+++++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~gV~i~~~~ 231 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRR------LGAEVTLIEYMPEILP----------Q-GDPETAALLRRALEKEGIRVRTKT 231 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------T-SCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCeEEEEEcCCcccc----------c-cCHHHHHHHHHHHHhcCCEEEcCC
Confidence 5799999999999999999998 5889999999876311 1 11233445667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcC-C--cc--EEEecEEEEeCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GL--IVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~--g~--~~~~d~lIlAtG~~p~~~~ 207 (500)
++.+++.+... ..+.+. + ++ .+.+|.||+|+|.+|....
T Consensus 232 ~v~~i~~~~~~-----------~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 232 KAVGYEKKKDG-----------LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEEEEEETTE-----------EEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEEEEEEeCCE-----------EEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 88888754321 134443 4 55 8999999999999887653
No 148
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=3.5e-07 Score=91.19 Aligned_cols=92 Identities=29% Similarity=0.402 Sum_probs=72.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-e
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (500)
++++|||||+.|+++|..|++ .|.+|+++++.+.+.. ...++...+.+.+++.+++++.+ +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~------------~~~~~~~~l~~~l~~~gV~i~~~~~ 205 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE------AGYHVKLIHRGAMFLG------------LDEELSNMIKDMLEETGVKFFLNSE 205 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH------TTCEEEEECSSSCCTT------------CCHHHHHHHHHHHHHTTEEEECSCC
T ss_pred CcEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCeecc------------CCHHHHHHHHHHHHHCCCEEEcCCE
Confidence 789999999999999999999 5889999999876311 11233445667777889999986 7
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
+.+++. . .+.+++++ +.+|.||+|+|.+|..
T Consensus 206 v~~i~~--~-------------~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 206 LLEANE--E-------------GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp EEEECS--S-------------EEEETTEE-EECSCEEEECCEEECC
T ss_pred EEEEEe--e-------------EEEECCCE-EEcCEEEECcCCCcCH
Confidence 888862 1 46677787 9999999999988764
No 149
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.41 E-value=4.4e-07 Score=95.31 Aligned_cols=34 Identities=32% Similarity=0.599 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|+||||||+||++|..|++ .|++|+|||+.+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~------~G~~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR------QGVRVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCC
Confidence 4799999999999999999999 689999999986
No 150
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.41 E-value=7.3e-07 Score=92.53 Aligned_cols=101 Identities=18% Similarity=0.307 Sum_probs=75.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+++|..|++ .|.+|+|+++.+.+... . ...++...+.+.+++.+++++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~GV~i~~~ 256 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQR------KGKEVVLIDVVDTCLAG---------Y-YDRDLTDLMAKNMEEHGIQLAFG 256 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTTT---------T-SCHHHHHHHHHHHHTTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCeEEEEEcccchhhh---------H-HHHHHHHHHHHHHHhCCeEEEeC
Confidence 45899999999999999999998 58899999998763210 1 11233445667778889999997
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+++++.+.+. ..+.+ ++..+.+|.||+|+|.+|..+
T Consensus 257 ~~v~~i~~~~~v-----------~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 257 ETVKEVAGNGKV-----------EKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp CCEEEEECSSSC-----------CEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CEEEEEEcCCcE-----------EEEEE-CCcEEECCEEEECCCCCcChH
Confidence 88888753321 12444 567899999999999887654
No 151
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.41 E-value=4e-07 Score=91.24 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|++|++ +|++|+|||+.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~------~G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK------QGVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCC
Confidence 4799999999999999999999 789999999975
No 152
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.41 E-value=1.8e-07 Score=88.11 Aligned_cols=38 Identities=34% Similarity=0.344 Sum_probs=34.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (500)
..+|+|||||||||+||..|++ .|++|+||||++..+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~------~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCC
Confidence 4789999999999999999999 7999999999887544
No 153
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.40 E-value=6.1e-07 Score=92.06 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+|+|+.+.+.. ..+ ..+...+.+.+++.+++++.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~~~-~~~~~~l~~~l~~~Gv~i~~~~ 229 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVING------LGAKTHLFEMFDAPLP----------SFD-PMISETLVEVMNAEGPQLHTNA 229 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------TSC-HHHHHHHHHHHHHHSCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCEEEEEEeCCchhh----------hhh-HHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 5889999999876311 111 223445566777789999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++..... ...+.++++..+.+|.||+|+|.+|...
T Consensus 230 ~v~~i~~~~~~----------~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 230 IPKAVVKNTDG----------SLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp CEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCc----------EEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 78888754320 0256677888899999999999988754
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=3e-07 Score=94.63 Aligned_cols=99 Identities=22% Similarity=0.320 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||++|+++|..|++ .|.+|+|+|+.+.+.. . ....+...+.+.+++.+++++.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~gv~i~~~~ 233 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRK------LGAQVSVVEARERILP----------T-YDSELTAPVAESLKKLGIALHLGH 233 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSST----------T-SCHHHHHHHHHHHHHHTCEEETTC
T ss_pred CCeEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCCcccc----------c-cCHHHHHHHHHHHHHCCCEEEECC
Confidence 5799999999999999999998 5889999999876321 1 11223344566677789999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecEEEEeCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~lIlAtG~~p~~~~ 207 (500)
.+.+++. .+. .+...+| ..+.+|.||+|+|.+|+.+.
T Consensus 234 ~v~~i~~-~~v------------~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 234 SVEGYEN-GCL------------LANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEEEET-TEE------------EEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred EEEEEEe-CCE------------EEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 8888875 221 3333345 58999999999999887653
No 155
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.39 E-value=5.9e-07 Score=90.81 Aligned_cols=101 Identities=25% Similarity=0.366 Sum_probs=77.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.. ......+...+.+.+++.+++++.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~~~----------~~~~~~~~~~l~~~l~~~GV~i~~~~ 205 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARA------KGLEVDVVELAPRVMA----------RVVTPEISSYFHDRHSGAGIRMHYGV 205 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTT----------TTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCcchh----------hccCHHHHHHHHHHHHhCCcEEEECC
Confidence 5789999999999999999998 6889999999876321 1112234455667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.++..+... ...+.+++|+.+.+|.||+|+|.+|..
T Consensus 206 ~v~~i~~~~~~----------v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 206 RATEIAAEGDR----------VTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp CEEEEEEETTE----------EEEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEEEEecCCc----------EEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 78888654321 014677888899999999999988764
No 156
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.39 E-value=1.8e-06 Score=88.67 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=76.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||+|+.|+++|..|++ .|.+|+++++.+.+. .......+...+.+.+++.+++++.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~d~~~~~~l~~~l~~~GV~i~~~~ 210 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVK------MKKTVHVFESLENLL----------PKYFDKEMVAEVQKSLEKQAVIFHFEE 210 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS----------TTTCCHHHHHHHHHHHHTTTEEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEEccCccc----------cccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 5789999999999999999999 588999999987631 11111234455677788889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i 208 (500)
.+.++...... ..+.++++ .+.+|.||+|+|.+|....+
T Consensus 211 ~v~~i~~~~~~-----------v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 211 TVLGIEETANG-----------IVLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp CEEEEEECSSC-----------EEEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred EEEEEEccCCe-----------EEEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 88888743321 13566666 89999999999998876543
No 157
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.39 E-value=6.4e-07 Score=93.13 Aligned_cols=37 Identities=16% Similarity=0.332 Sum_probs=33.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+.++|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL------AGVEVVVLERLVE 45 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCCC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 455899999999999999999999 7999999999763
No 158
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.38 E-value=7.1e-07 Score=92.76 Aligned_cols=110 Identities=17% Similarity=0.235 Sum_probs=69.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc-----------------chhhh----------
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYEL---------- 129 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~-----------------~~~~~---------- 129 (500)
...++|+||||||+||++|..|++ .|++|+|||+.+.....+ ....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 83 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL------GGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGH 83 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccce
Confidence 455899999999999999999999 799999999976321110 00000
Q ss_pred cccc-ccC---------------ccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCcc---E
Q 010827 130 LSGE-VDA---------------WEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGL---I 189 (500)
Q Consensus 130 ~~g~-~~~---------------~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~---~ 189 (500)
..+. .+. ..+...+.+.+.+.+++++.+ +++.+..+... .++++.++. +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-----------v~v~~~~~~g~~~ 152 (499)
T 2qa2_A 84 FGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-----------VVVEVEGPDGPRS 152 (499)
T ss_dssp ETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-----------EEEEEECSSCEEE
T ss_pred ecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-----------EEEEEEcCCCcEE
Confidence 0000 000 001111334445568888886 88888655431 245554543 7
Q ss_pred EEecEEEEeCCCCC
Q 010827 190 VEYDWLVLSLGAEP 203 (500)
Q Consensus 190 ~~~d~lIlAtG~~p 203 (500)
+++|+||.|.|...
T Consensus 153 ~~a~~vVgADG~~S 166 (499)
T 2qa2_A 153 LTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEEEEECCCTTC
T ss_pred EEeCEEEEccCccc
Confidence 99999999999764
No 159
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.38 E-value=4.3e-07 Score=96.00 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=33.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
..+||||||||++||+||..|++ .|++|+|||+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~------~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKK------AGANVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 44799999999999999999999 68899999998743
No 160
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.37 E-value=7.1e-07 Score=92.31 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++|+.+.+. ... ...+...+.+.+++.+++++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l----------~~~-~~~~~~~l~~~l~~~gv~i~~~~ 245 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR------LGSKVTVVEFQPQIG----------ASM-DGEVAKATQKFLKKQGLDFKLST 245 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS----------SSS-CHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCccc----------ccc-CHHHHHHHHHHHHHCCCEEEeCC
Confidence 5899999999999999999999 688999999987631 111 1233455667777889999986
Q ss_pred eEEEEec--CCCCCCCCCceeecCcEEEcC-----CccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLE-----SGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~--~~~~~~~~~~~~~~~~~v~~~-----~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++. +.+. ..+.+. ++..+.+|.||+|+|.+|...
T Consensus 246 ~v~~i~~~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 246 KVISAKRNDDKNV-----------VEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEEEETTTTE-----------EEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEEEEEecCCCe-----------EEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 8888875 3221 133333 456899999999999888754
No 161
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.37 E-value=7.6e-07 Score=91.66 Aligned_cols=100 Identities=23% Similarity=0.410 Sum_probs=75.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. ..+ ..+...+.+.+++.+++++.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~------~G~~Vtlv~~~~~~l~----------~~~-~~~~~~l~~~l~~~gv~i~~~~ 228 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRS------FGSEVTVVALEDRLLF----------QFD-PLLSATLAENMHAQGIETHLEF 228 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------TSC-HHHHHHHHHHHHHTTCEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCEEEEEEcCCcccc----------ccC-HHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 5889999999876321 111 123344566777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCcc-EEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+.. ...+.+++++ .+.+|.||+|+|.+|+..
T Consensus 229 ~v~~i~~~~~-----------~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 229 AVAALERDAQ-----------GTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp CEEEEEEETT-----------EEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCC-----------eEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 7888865422 0256777887 899999999999988754
No 162
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.36 E-value=4.4e-07 Score=93.23 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||+||||||||+++|..|++ .|++|+|+|+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~------~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR------RGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS------SSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCC
Confidence 4799999999999999999998 7999999999864
No 163
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.36 E-value=8.5e-07 Score=90.44 Aligned_cols=101 Identities=24% Similarity=0.322 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+.+.. ......+...+.+.+++.+++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~l~~~GV~i~~~~ 212 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIK------ANMHVTLLDTAARVLE----------RVTAPPVSAFYEHLHREAGVDIRTGT 212 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTT----------TTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCcccc----------chhhHHHHHHHHHHHHhCCeEEEeCC
Confidence 5899999999999999999998 6889999999876311 1111223344566777789999987
Q ss_pred eEEEEec--CCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++. .... ...+.+.++..+.+|.||+|+|.+|..
T Consensus 213 ~v~~i~~~~~~~~----------v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 213 QVCGFEMSTDQQK----------VTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp CEEEEEECTTTCC----------EEEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEEEEeccCCCc----------EEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 8888875 2211 014667788899999999999988763
No 164
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.36 E-value=5.2e-07 Score=90.84 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||+|||||++|+++|++|++ +|++|+|+|+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~------~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE------RGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCC
Confidence 3799999999999999999999 7999999999753
No 165
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=1.5e-06 Score=90.32 Aligned_cols=101 Identities=12% Similarity=0.210 Sum_probs=76.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. .. ..++...+.+.+++.+++++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~~-d~~~~~~l~~~l~~~gv~i~~~~ 238 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR------LGIDSYIFARGNRILR----------KF-DESVINVLENDMKKNNINIVTFA 238 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSSSSCT----------TS-CHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECChHHHHHHHHHHHH------cCCeEEEEecCCccCc----------cc-chhhHHHHHHHHHhCCCEEEECC
Confidence 6899999999999999999998 5889999999876321 11 1233445667778889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccE-EEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLI-VEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++..... ...+.+++++. +.+|.||+|+|.+|...
T Consensus 239 ~v~~i~~~~~~----------~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 239 DVVEIKKVSDK----------NLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp CEEEEEESSTT----------CEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred EEEEEEEcCCc----------eEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 78888754210 01466677777 99999999999998763
No 166
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.35 E-value=6.9e-07 Score=90.02 Aligned_cols=36 Identities=31% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~ 118 (500)
..+||+|||||++|+++|++|++. +| ++|+|||+.+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~-----~G~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKN-----HGITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHH-----HCCCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHh-----cCCCcEEEEeCCC
Confidence 357999999999999999999982 26 8999999976
No 167
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=8.9e-07 Score=90.96 Aligned_cols=100 Identities=18% Similarity=0.296 Sum_probs=73.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+|+|+.+.+. + . ....+...+.+.+++.+++++.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gv~i~~~~ 232 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYAN------FGTKVTILEGAGEIL---------S-G-FEKQMAAIIKKRLKKKGVEVVTNA 232 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS---------T-T-SCHHHHHHHHHHHHHTTCEEEESE
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5899999999999999999998 588999999987631 1 0 11233444566777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcC---CccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+... ..+.+. ++..+.+|.||+|+|.+|...
T Consensus 233 ~v~~i~~~~~~-----------~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 233 LAKGAEEREDG-----------VTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEEEEEEETTE-----------EEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred EEEEEEEeCCe-----------EEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 88888654321 123332 456899999999999988654
No 168
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.35 E-value=2.2e-06 Score=83.84 Aligned_cols=103 Identities=9% Similarity=0.030 Sum_probs=78.5
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC----cc------------CCCCC-----cchHHHHHHHHHhCC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET----TI------------CPTGT-----PGNREAALKVLSARK 302 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~----~~------------~~~~~-----~~~~~~~~~~l~~~g 302 (500)
.++|+|||+|..|+.+|..|++.+.+ |+++++.+ .+ .+.++ ..+...+.+.+++.|
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999998766 99999843 11 11222 356667778888999
Q ss_pred cEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 303 VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 303 V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++++.++ +..++.+. +.+.+... ...++.++.+|.||+|+|..|..+
T Consensus 99 v~i~~~~-v~~i~~~~-----------------------~~~~v~~~---~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 99 TEIITET-VSKVDLSS-----------------------KPFKLWTE---FNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp CEEECSC-EEEEECSS-----------------------SSEEEEET---TCSSSCCEEEEEEEECCCEEECCC
T ss_pred CEEEEeE-EEEEEEcC-----------------------CEEEEEEE---ecCCCcEEEeCEEEECcCCCcCCC
Confidence 9999998 88888765 56666542 112567789999999999987644
No 169
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.35 E-value=1.2e-06 Score=90.53 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=74.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
+++|+|||||+.|+++|..|++ .|.+|+++++.+.+... . ...++...+.+.+++.+++++.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~Gv~i~~~~ 241 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQR------LGADVTAVEFLGHVGGV---------G-IDMEISKNFQRILQKQGFKFKLNT 241 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSCS---------S-CCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHH------cCCEEEEEeccCccCCc---------c-cCHHHHHHHHHHHHHCCCEEEeCc
Confidence 5799999999999999999998 58899999998763110 1 11233445667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEE-----cCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVL-----LESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~-----~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+... . ..+. ..++..+.+|.||+|+|.+|...
T Consensus 242 ~v~~i~~~~~~-----~-----~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 242 KVTGATKKSDG-----K-----IDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEEEECTTS-----C-----EEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred eEEEEEEcCCc-----e-----EEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 88888764320 0 1233 34566899999999999988654
No 170
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.34 E-value=1.2e-06 Score=88.21 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=31.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~------~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK------HGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHh------CCCCEEEEecCCC
Confidence 589999999999999999999 7999999999764
No 171
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.33 E-value=1.2e-06 Score=92.58 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
..++|+|||+|++||++|..|++ .|++|+|+|+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~------~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD------AGAKVILLEKEPIP 161 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS------SSCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCcEEEEecCCCC
Confidence 35799999999999999999998 68999999998743
No 172
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.32 E-value=1.3e-06 Score=89.72 Aligned_cols=101 Identities=25% Similarity=0.298 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+.+... . ....+...+.+.+++.+++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~Gv~i~~~~ 212 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSN------QNYNVNLIDGHERVLYK---------Y-FDKEFTDILAKDYEAHGVNLVLGS 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSTTTT---------T-SCHHHHHHHHHHHHHTTCEEEESS
T ss_pred CCeEEEECcCHHHHHHHHHHHh------cCCEEEEEEcCCchhhh---------h-hhhhHHHHHHHHHHHCCCEEEcCC
Confidence 5789999999999999999998 58899999998763210 1 11233445667778889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++..... + ..+.. ++..+.+|.||+|+|.+|...
T Consensus 213 ~v~~i~~~~~~------v----~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 213 KVAAFEEVDDE------I----ITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp CEEEEEEETTE------E----EEEET-TSCEEEESEEEECCCEEECCG
T ss_pred eeEEEEcCCCe------E----EEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 88888652220 0 01334 567899999999999888654
No 173
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.32 E-value=1.1e-06 Score=90.83 Aligned_cols=102 Identities=16% Similarity=0.218 Sum_probs=75.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++++|||||+.|+++|..|++ .|.+|+++++.+.+.. .. ...+...+.+.+++.+++++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~~-d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHG------LGSETHLVIRGETVLR----------KF-DECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHH------TTCEEEEECSSSSSCT----------TS-CHHHHHHHHHHHHHHTCEEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCceEEEEeCCcccc----------cc-CHHHHHHHHHHHHhCCeEEEeC
Confidence 35799999999999999999998 5889999999876321 11 1223345666777789999987
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCc-cEEEecEEEEeCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++..... . ...+.+++| ..+.+|.||+|+|.+|..
T Consensus 247 ~~v~~i~~~~~~----~-----~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 247 SKIVKVEKNVET----D-----KLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CCEEEEEECC-C----C-----CEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CEEEEEEEcCCC----c-----EEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 78888754220 0 014667777 789999999999988875
No 174
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.31 E-value=1.5e-06 Score=90.21 Aligned_cols=104 Identities=19% Similarity=0.285 Sum_probs=77.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||||+.|+++|..|+++. .+|.+|+++++.+.+. + .. ...+...+.+.+++.+++++.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l---------~-~~-d~~~~~~l~~~l~~~GV~i~~~~ 252 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMIL---------R-GF-DSELRKQLTEQLRANGINVRTHE 252 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSS---------T-TS-CHHHHHHHHHHHHHTTEEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcc---------c-cc-CHHHHHHHHHHHHhCCCEEEeCC
Confidence 579999999999999999999841 1288999999987632 1 11 1233455667777889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+... ...+.++++..+.+|.||+|+|.+|...
T Consensus 253 ~v~~i~~~~~~----------~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 253 NPAKVTKNADG----------TRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEEEEcCCC----------EEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 88888754320 0256677787899999999999988754
No 175
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.30 E-value=8.7e-07 Score=93.90 Aligned_cols=42 Identities=33% Similarity=0.528 Sum_probs=33.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
.+||+|||||||||++|..|++......+|++|+|||+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 489999999999999999999830000128999999998653
No 176
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.30 E-value=2e-06 Score=83.58 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=74.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC--Ccc--------CCCCC----cchHHHHHHHHHhCCcEEEcCce
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE--TTI--------CPTGT----PGNREAALKVLSARKVQLVLGYF 310 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~--~~~--------~~~~~----~~~~~~~~~~l~~~gV~i~~~~~ 310 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++. ..+ .+.++ ..+.+.+.+.+++.|++++. ..
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 91 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLK---TLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DI 91 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SC
T ss_pred cCEEEECccHHHHHHHHHHHHCCCc---EEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EE
Confidence 5999999999999999999998766 9999985 111 12221 34556667778888999999 89
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
+.+++.++ +.+.+.+. ++.++.+|.||+|+|..|..+
T Consensus 92 v~~i~~~~-----------------------~~~~v~~~------~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 92 VEKIENRG-----------------------DEFVVKTK------RKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEEEC-------------------------CEEEEES------SSCEEEEEEEEECCCCEECCC
T ss_pred EEEEEecC-----------------------CEEEEEEC------CCCEEEcCEEEECcCCCCccC
Confidence 99988754 45556542 557899999999999987644
No 177
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.30 E-value=1.5e-06 Score=90.30 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=77.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||||+.|+++|..|+++. .+|.+|+++++.+.+.. .. ..++...+.+.+++.+++++.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~----------~~-d~~~~~~l~~~l~~~GV~i~~~~ 256 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLILR----------GF-DETIREEVTKQLTANGIEIMTNE 256 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSCT----------TS-CHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCcccc----------cc-CHHHHHHHHHHHHhCCCEEEeCC
Confidence 579999999999999999999841 12889999999876321 11 1223445667777889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.|.+++.+... ...+.+.++..+.+|.||+|+|.+|...
T Consensus 257 ~v~~i~~~~~~----------~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 257 NPAKVSLNTDG----------SKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEEEEEEcCCc----------eEEEEECCCcEEEcCEEEECCCCccccc
Confidence 88888754320 0256677888899999999999988753
No 178
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.29 E-value=1.1e-06 Score=90.80 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=76.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCC-CCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDK-KPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~-g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.++++|||+|+.|+++|..|++ . |.+|+++++.+.+.. .. ....+...+.+.+++.+++++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~------~~g~~Vtlv~~~~~~l~---------~~-~~~~~~~~l~~~l~~~GV~i~~~ 222 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLAD------MWGIDTTVVELADQIMP---------GF-TSKSLSQMLRHDLEKNDVVVHTG 222 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------HHCCEEEEECSSSSSST---------TT-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH------hcCCcEEEEEccCcccc---------cc-cCHHHHHHHHHHHHhcCCEEEeC
Confidence 5799999999999999999998 5 789999999875311 01 11234455667778889999987
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++..... ..+.+.+++.+.+|.||+|+|.+|..
T Consensus 223 ~~v~~i~~~~~~-----------v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 223 EKVVRLEGENGK-----------VARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp CCEEEEEESSSB-----------EEEEEESSCEEECSEEEECSCEEECC
T ss_pred CEEEEEEccCCe-----------EEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 88888763321 13666778899999999999988764
No 179
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.29 E-value=8.6e-07 Score=89.72 Aligned_cols=35 Identities=37% Similarity=0.479 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCe-EEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQ-VLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~-V~lie~~~~ 119 (500)
.++|+|||||++||++|..|++ .|++ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~------~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ------AGIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCCC
Confidence 4799999999999999999999 6899 999999764
No 180
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=2.3e-06 Score=87.73 Aligned_cols=99 Identities=16% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||+|+.|+++|..|++ .|.+|+++++.+.+. .......+...+.+.+++. ++++.+
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~~~~~~~~l~~~l~~~-v~i~~~ 209 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAA------QGKNVTMIVRGERVL----------RRSFDKEVTDILEEKLKKH-VNLRLQ 209 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTT----------TTTSCHHHHHHHHHHHTTT-SEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------CCCeEEEEEcCCccc----------hhhcCHHHHHHHHHHHHhC-cEEEeC
Confidence 34699999999999999999999 588999999987632 1101123344566677777 999886
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++...+. .....++..+.+|.||+|+|.+|..
T Consensus 210 ~~v~~i~~~~~v------------~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 210 EITMKIEGEERV------------EKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp CCEEEEECSSSC------------CEEEETTEEEECSEEEECSCEEECC
T ss_pred CeEEEEeccCcE------------EEEEeCCCEEECCEEEEeeCCccCH
Confidence 78888755431 2223456789999999999988764
No 181
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.27 E-value=8.6e-07 Score=91.79 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||||+.|+++|..|++ .|.+|+|+|+.+.+.. . ...++...+.+.+++.+++++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~------~G~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~gV~i~~~~ 247 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST------LGSRLDVVEMMDGLMQ----------G-ADRDLVKVWQKQNEYRFDNIMVNT 247 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH------HTCEEEEECSSSSSST----------T-SCHHHHHHHHHHHGGGEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCcccc----------c-cCHHHHHHHHHHHHhcCCEEEECC
Confidence 5799999999999999999998 5789999999876321 1 11233445667778889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCC----ccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES----GLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~----g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++.+... ..+.+.+ +..+.+|.||+|+|.+|+.
T Consensus 248 ~v~~i~~~~~~-----------~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 248 KTVAVEPKEDG-----------VYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEEEEETTE-----------EEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred EEEEEEEcCCe-----------EEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 88888654321 1344444 6678999999999998865
No 182
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.26 E-value=3.6e-06 Score=82.90 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=74.0
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC---------------------CCCC-----------cchHH
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------------PTGT-----------PGNRE 292 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~---------------------~~~~-----------~~~~~ 292 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++.+.+. +.++ ..+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 4899999999999999999987765 99999876431 1110 35566
Q ss_pred HHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCccee-EeecccccCCCccEEeecEEEEecCC
Q 010827 293 AALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGS 371 (500)
Q Consensus 293 ~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-l~~~~~~~~~~~~~l~~D~vi~a~G~ 371 (500)
.+.+.+++.|++++.++.|++++.++ +.+. +.+. ++ ++.+|.||+|+|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~-----------------------~~~~~v~~~------~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFG-----------------------ERLRVVARD------GR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEET-----------------------TEEEEEETT------SC-EEEEEEEEECCCS
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECC-----------------------CcEEEEEeC------CC-EEEeCEEEECCCC
Confidence 77778888999999999999998755 5555 5532 33 8999999999995
Q ss_pred C
Q 010827 372 K 372 (500)
Q Consensus 372 ~ 372 (500)
.
T Consensus 131 ~ 131 (357)
T 4a9w_A 131 W 131 (357)
T ss_dssp G
T ss_pred C
Confidence 3
No 183
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.25 E-value=1.9e-06 Score=91.51 Aligned_cols=97 Identities=25% Similarity=0.417 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+.+.. . ....+...+.+.+++.+++++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~GV~i~~~~ 249 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRE------RGIEVTLVEMANQVMP----------P-IDYEMAAYVHEHMKNHDVELVFED 249 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCT----------T-SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCcccc----------c-CCHHHHHHHHHHHHHcCCEEEECC
Confidence 5799999999999999999999 5889999999875311 1 11233455667778889999985
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.+++.... .+.+.++..+.+|.||+|+|.+|..
T Consensus 250 ~v~~i~~~~~-------------~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 250 GVDALEENGA-------------VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp CEEEEEGGGT-------------EEEETTSCEEECSEEEECSCEEECC
T ss_pred eEEEEecCCC-------------EEEECCCCEEEcCEEEEccCCCCCh
Confidence 8888865433 4677788899999999999988764
No 184
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.25 E-value=2e-06 Score=90.80 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.- . ....+...+.+.+++.+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~GV~i~~~~ 213 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHH------LGIKTTLLELADQVMT----------P-VDREMAGFAHQAIRDQGVDLRLGT 213 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSCT----------T-SCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCcEEEEEcCCccch----------h-cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 4699999999999999999998 5889999999875211 1 11223444566777889999986
Q ss_pred eEEEEecCCCCCC-----CCCc-e--eecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGV-----NGPM-A--CTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~-----~~~~-~--~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.+.++........ .... . .-....+...+++.+.+|.||+|+|.+|..
T Consensus 214 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred eEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 7888765210000 0000 0 000124556778899999999999988764
No 185
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.25 E-value=1.9e-06 Score=84.00 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=75.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC---------------CCCC----cchHHHHHHHHHhCCcEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------PTGT----PGNREAALKVLSARKVQL 305 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~---------------~~~~----~~~~~~~~~~l~~~gV~i 305 (500)
++|+|||+|..|+.+|..|++.+.+ |+++++.+.+. +.++ ..+...+.+.+++.++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 5899999999999999999987665 99999976432 1111 345566677788889999
Q ss_pred EcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCC---CCCCC
Q 010827 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS---KPLLP 376 (500)
Q Consensus 306 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~---~p~~~ 376 (500)
+.++.|..++..++ +.+.+.+. +++ +.+|.||+|+|. .|..+
T Consensus 85 ~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 85 CLEQAVESVEKQAD----------------------GVFKLVTN------EET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp ECSCCEEEEEECTT----------------------SCEEEEES------SEE-EEEEEEEECCTTSCCEECCC
T ss_pred EccCEEEEEEECCC----------------------CcEEEEEC------CCE-EEeCEEEECCCCCcCCCCCC
Confidence 99999999987541 24555542 333 999999999999 66543
No 186
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.25 E-value=2.7e-06 Score=85.29 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=72.6
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCC------------cchHHHHHHHHHhCCcEEEcCceEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGT------------PGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~------------~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
-+|+|||+|..|+.+|..|...+. .|+++++.+.+....+ ..+.....+.+++.||+++.+++|+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~---~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~ 86 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCD---DITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFAT 86 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCS---CEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCC---EEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEE
Confidence 489999999999999999943333 3999998776421100 1111223466778999999999999
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~ 377 (500)
+|+.+. ..|++. +++++.+|.+|+|||.+|..+-
T Consensus 87 ~id~~~-----------------------~~v~~~--------~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 87 SIDPNN-----------------------KLVTLK--------SGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp EEETTT-----------------------TEEEET--------TSCEEECSEEEECCCEEECCCC
T ss_pred EEECCC-----------------------CEEEEC--------CCCEEECCEEEEecCCCcCCCC
Confidence 998854 445554 6788999999999999887543
No 187
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.25 E-value=2.3e-06 Score=88.13 Aligned_cols=101 Identities=17% Similarity=0.247 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+|+++.+.+. + .. ..++...+.+.+++.+++++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~-~~-~~~~~~~l~~~l~~~gv~i~~~~ 233 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKN------YGVDVTIVEFLPRAL---------P-NE-DADVSKEIEKQFKKLGVTILTAT 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS---------T-TS-CHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHH------cCCeEEEEEcCCccc---------c-cc-CHHHHHHHHHHHHHcCCEEEeCc
Confidence 5799999999999999999998 588999999987631 1 11 1223344666777789999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcC-Cc--cEEEecEEEEeCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-SG--LIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~g--~~~~~d~lIlAtG~~p~~~~ 207 (500)
.+.+++.+... ..+.+. ++ ..+.+|.||+|+|.+|+...
T Consensus 234 ~v~~i~~~~~~-----------~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 234 KVESIADGGSQ-----------VTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEEEECSSC-----------EEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred EEEEEEEcCCe-----------EEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 88888754321 133332 44 57999999999999887543
No 188
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.25 E-value=8.5e-07 Score=89.67 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|+.|++. .+|++|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCC
Confidence 37999999999999999999992 1289999999975
No 189
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.24 E-value=2.7e-06 Score=83.04 Aligned_cols=38 Identities=26% Similarity=0.374 Sum_probs=33.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
.+||+|||||++|+++|+.|++. .+|++|+|||+.+..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCcc
Confidence 47999999999999999999983 138999999998754
No 190
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.24 E-value=1.2e-06 Score=88.38 Aligned_cols=100 Identities=19% Similarity=0.076 Sum_probs=71.8
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC----------CCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT----------GTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~----------~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
+|||+|||+|+.|+.+|..|++.+... .|++|++.+..... .+.+....-.+.+.+.||+++.+ +++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~-~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~ 79 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSI-EVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALG 79 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCC-eEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEE
Confidence 789999999999999999998776532 39999987653211 01111111134566789999876 6888
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
|+.+. ..+.+. ++.++.+|.+|+|+|.+++.+
T Consensus 80 id~~~-----------------------~~v~~~--------~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 80 IDPDK-----------------------KLVKTA--------GGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EETTT-----------------------TEEEET--------TSCEEECSEEEECCCEEECGG
T ss_pred EEccC-----------------------cEEEec--------ccceeecceeeeccCCccccC
Confidence 88754 445543 778999999999999987644
No 191
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.23 E-value=1.6e-06 Score=89.68 Aligned_cols=100 Identities=18% Similarity=0.250 Sum_probs=73.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. . ....+...+.+.+++.+++++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~Gv~i~~~ 247 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVE------LGKKVRMIERNDHIGT----------I-YDGDMAEYIYKEADKHHIEILTN 247 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH------TTCEEEEECCGGGTTS----------S-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------cCCeEEEEEeCCchhh----------c-CCHHHHHHHHHHHHHcCcEEEcC
Confidence 46899999999999999999998 5889999999865321 1 11233445667777889999976
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+.+. ..+.++ +..+.+|.||+|+|.+|...
T Consensus 248 ~~v~~i~~~~~v-----------~~v~~~-~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 248 ENVKAFKGNERV-----------EAVETD-KGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp CCEEEEEESSBE-----------EEEEET-TEEEECSEEEECSCEEESCG
T ss_pred CEEEEEEcCCcE-----------EEEEEC-CCEEEcCEEEECcCCCcChH
Confidence 78888654321 124444 34899999999999887643
No 192
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.23 E-value=2.9e-06 Score=87.39 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=73.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHh-ccCCcEEEE
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLL-ANTGVQFFK 156 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~ 156 (500)
..++++|||||+.|+++|..|++ .|.+|+++++.+.+.. . ...++...+.+.+ ++.+++++.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~d~~~~~~l~~~l~~~~gv~i~~ 235 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWAR------LGAEVTVVEFAPRCAP----------T-LDEDVTNALVGALAKNEKMKFMT 235 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------T-SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHH------hCCEEEEEecCCcccc----------c-CCHHHHHHHHHHHhhcCCcEEEe
Confidence 35799999999999999999998 5889999999876321 1 1122344566777 788999998
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEEcC--Cc--cEEEecEEEEeCCCCCCCC
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~--~g--~~~~~d~lIlAtG~~p~~~ 206 (500)
+ ++.+++.+... ..+.+. ++ ..+.+|.||+|+|.+|...
T Consensus 236 ~~~v~~i~~~~~~-----------~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 236 STKVVGGTNNGDS-----------VSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp SCEEEEEEECSSS-----------EEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred CCEEEEEEEcCCe-----------EEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 6 88888765321 133433 45 5799999999999988654
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=1.9e-06 Score=89.48 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++.+. ..|.+|+++++.+.+. ...-...+...+.+.+++.+|+++.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~--~~g~~V~~v~~~~~~~----------~~~l~~~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKAR--ALGTEVIQLFPEKGNM----------GKILPEYLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHH--HHTCEEEEECSSSSTT----------TTTSCHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhh--hcCCEEEEEecCcccc----------cccCCHHHHHHHHHHHHhcCCEEEeCC
Confidence 5799999999999999999987431 0378999999876421 11111233445667778889999987
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~ 205 (500)
.|..++..... ..+.+.+|..+.+|.||+|+|.+|..
T Consensus 248 ~V~~i~~~~~~-----------~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 248 IVQSVGVSSGK-----------LLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECCCEEECC
T ss_pred EEEEEEecCCe-----------EEEEECCCCEEECCEEEECCCCCccH
Confidence 78888643221 14667788899999999999998764
No 194
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.22 E-value=1.9e-06 Score=90.05 Aligned_cols=100 Identities=21% Similarity=0.190 Sum_probs=76.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.+++++|||||+.|++.|..++++ |.+|||+++... +... ..++...+...+++.++.++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~----------L~~~--D~ei~~~l~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIV----------LRGF--DQQCAVKVKLYMEEQGVMFKNG 283 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCS----------STTS--CHHHHHHHHHHHHHTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHhc------CCeEEEeccccc----------cccc--chhHHHHHHHHHHhhcceeecc
Confidence 468999999999999999999995 789999987543 2111 1334556777888889999987
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+..+...... ..+...++..+.+|.|++|+|.+|+..
T Consensus 284 ~~v~~~~~~~~~-----------~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 284 ILPKKLTKMDDK-----------ILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp CCEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEESCG
T ss_pred eEEEEEEecCCe-----------EEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 67777654431 246677778899999999999988764
No 195
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.22 E-value=1.9e-06 Score=87.76 Aligned_cols=96 Identities=16% Similarity=0.185 Sum_probs=71.0
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchH-------------HHHHHHHHhCCcEEEcCce
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNR-------------EAALKVLSARKVQLVLGYF 310 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~-------------~~~~~~l~~~gV~i~~~~~ 310 (500)
.|+|+|||||..|+.+|..|++.+.+ ..||+|++.+.+.. .+.+. ..+.+.+++.||+++.+ +
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~~~~~--~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~ 77 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYFGF--TPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-K 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEEEC--GGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-C
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCCCCcc--CccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-E
Confidence 37999999999999999999887653 24999999875421 11111 11234566789999877 7
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
+++|+.+. ..|+++ +++++++|.+|+|+|.++.
T Consensus 78 v~~Id~~~-----------------------~~V~~~--------~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 78 AESIDPDA-----------------------NTVTTQ--------SGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEEETTT-----------------------TEEEET--------TCCEEECSEEEECCCCEEE
T ss_pred EEEEECCC-----------------------CEEEEC--------CCCEEECCEEEEeCCCCcc
Confidence 89998755 556554 7789999999999998754
No 196
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.22 E-value=2.5e-06 Score=88.73 Aligned_cols=100 Identities=18% Similarity=0.267 Sum_probs=76.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++++|||+|+.|+++|..|++ .|.+|+++++.+.+. + . ....+...+.+.+++.+++++.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~d~~~~~~l~~~l~~~GV~i~~~~ 244 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTE------LGVPVTVVASQDHVL---------P-Y-EDADAALVLEESFAERGVRLFKNA 244 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHH------TTCCEEEECSSSSSS---------C-C-SSHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 588999999987632 1 1 11234455667778889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.|.++..+... ..+.+.++..+.+|.||+|+|.+|...
T Consensus 245 ~V~~i~~~~~~-----------v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 245 RAASVTRTGAG-----------VLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp CEEEEEECSSS-----------EEEEETTSCEEEESEEEECCCEEECCS
T ss_pred EEEEEEEeCCE-----------EEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 88888755321 145566777899999999999988753
No 197
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.21 E-value=1.3e-06 Score=89.15 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=73.2
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCC-----------CcchHHHHHHHHHhCCcEEEcCceEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG-----------TPGNREAALKVLSARKVQLVLGYFVR 312 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~-----------~~~~~~~~~~~l~~~gV~i~~~~~v~ 312 (500)
.++|+|||||..|+.+|..|++.......|+++++.+.+.... ...+...+.+.+++.||+++. ..++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~ 82 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAE 82 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEE
Confidence 3699999999999999999998432222399999987542110 011112235667789999985 5889
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~ 378 (500)
.++.+. ..|.+. +++++.+|.+|+|+|.+|+.+.+
T Consensus 83 ~id~~~-----------------------~~V~~~--------~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 83 QIDAEA-----------------------QNITLA--------DGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EEETTT-----------------------TEEEET--------TSCEEECSEEEECCCCEECGGGS
T ss_pred EEEcCC-----------------------CEEEEC--------CCCEEECCEEEECCCCCcCcccC
Confidence 998754 444443 56789999999999998875433
No 198
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.20 E-value=4.6e-06 Score=86.08 Aligned_cols=101 Identities=18% Similarity=0.265 Sum_probs=75.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.. . ....+...+.+.+++.+++++.+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~Gv~v~~~ 241 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWAR------LGAEVTVLEAMDKFLP----------A-VDEQVAKEAQKILTKQGLKILLG 241 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSST----------T-SCHHHHHHHHHHHHHTTEEEEET
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCcEEEEecCCCcCc----------c-cCHHHHHHHHHHHHhCCCEEEEC
Confidence 35789999999999999999998 5889999999876311 1 11234455667778889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCC--c-cEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES--G-LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~--g-~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++..... ..+...+ + ..+.+|.||+|+|.+|...
T Consensus 242 ~~v~~i~~~~~~-----------~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 242 ARVTGTEVKNKQ-----------VTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp CEEEEEEECSSC-----------EEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred CEEEEEEEcCCE-----------EEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 88888765431 1344443 3 5789999999999887654
No 199
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.20 E-value=1.4e-06 Score=88.23 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=73.6
Q ss_pred cEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCCccCC--C---------CCcchHHHHHHHHHhCCcEEEcCce
Q 010827 245 IRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVETTICP--T---------GTPGNREAALKVLSARKVQLVLGYF 310 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~~~~~--~---------~~~~~~~~~~~~l~~~gV~i~~~~~ 310 (500)
++|+|||||..|+.+|..|++ .+.+ |+++++.+.+.. . ...++...+.+.+++.|++++.+ .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~ 77 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-T 77 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-E
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-e
Confidence 589999999999999999998 4444 999998775421 1 12334445667788889999988 8
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++.++.+. ..|.+.. ..++..++.+|.||+|+|.+|+.+
T Consensus 78 v~~i~~~~-----------------------~~V~~~~----g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 78 VEKIDAKS-----------------------SMVYYTK----PDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EEEEETTT-----------------------TEEEEEC----TTSCEEEEECSEEEECCCCEECGG
T ss_pred EEEEeCCC-----------------------CEEEEcc----CCcccceeeCCEEEECCCCCcCcc
Confidence 99988754 4555541 111234689999999999988754
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.20 E-value=3.3e-06 Score=88.33 Aligned_cols=103 Identities=14% Similarity=0.245 Sum_probs=76.2
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-e
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (500)
++++|||||+.|+++|..|++ .|.+|+++++.+.+.. . ....+...+.+.+++.+++++.+ .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA------TGRRTVMLVRTEPLKL----------I-KDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTTT----------C-CSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEecCcccc----------c-ccHHHHHHHHHHHHhCCcEEEECCE
Confidence 899999999999999999998 5889999999876321 1 11233455667777889999986 8
Q ss_pred EEEEecCCCCCCCCCceeecCcEEEcCCcc-EEEecEEEEeCCCCCCCC
Q 010827 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~d~lIlAtG~~p~~~ 206 (500)
|+++...... . +....+.+++|. .+.+|.||+|+|.+|...
T Consensus 278 V~~i~~~~~~-----~--v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 278 VTRIEEDANG-----R--VQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp EEEEEECTTS-----B--EEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred EEEEEEcCCC-----c--eEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 8888753220 0 000246667777 899999999999988753
No 201
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.19 E-value=8.2e-06 Score=79.83 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=72.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC---------------CCCC----cchHHHHHHHHHhCCcEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------PTGT----PGNREAALKVLSARKVQL 305 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~---------------~~~~----~~~~~~~~~~l~~~gV~i 305 (500)
++|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. +.++ ..+...+.+.+++.++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 5899999999999999999887665 99999875431 1111 234555666777889999
Q ss_pred EcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCC
Q 010827 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 372 (500)
Q Consensus 306 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~ 372 (500)
+.++.|..++.++ +.+.+.+. ++.++.+|.||+|+|..
T Consensus 83 ~~~~~v~~i~~~~-----------------------~~~~v~~~------~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 83 SLGERAETLEREG-----------------------DLFKVTTS------QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EESCCEEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCTTS
T ss_pred EeCCEEEEEEECC-----------------------CEEEEEEC------CCCEEEeCEEEECCCCC
Confidence 9999999988744 34555532 55689999999999984
No 202
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.19 E-value=4.7e-06 Score=86.86 Aligned_cols=37 Identities=14% Similarity=0.395 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
..+||||||||+|||+||..|++ .|++|+|+||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~------~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAAR------AGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 35899999999999999999999 68999999998743
No 203
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.19 E-value=4.5e-06 Score=86.58 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=72.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+++|..|++ .|.+|+++++.+.+. ... ..++...+.+.+++. ++++.+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~-d~~~~~~l~~~l~~~-V~i~~~ 234 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSR------LGVIVKVFGRSGSVA----------NLQ-DEEMKRYAEKTFNEE-FYFDAK 234 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHH------TTCEEEEECCTTCCT----------TCC-CHHHHHHHHHHHHTT-SEEETT
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCccc----------ccC-CHHHHHHHHHHHhhC-cEEEEC
Confidence 35899999999999999999999 588999999988632 111 123344455666666 888875
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcC--Cc--cEEEecEEEEeCCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~--~g--~~~~~d~lIlAtG~~p~~~~ 207 (500)
.+..+...... ..+... +| ..+.+|.||+|+|.+|....
T Consensus 235 ~~v~~i~~~~~~-----------v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 235 ARVISTIEKEDA-----------VEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CEEEEEEECSSS-----------EEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred CEEEEEEEcCCE-----------EEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 78888654331 134432 55 68999999999999887554
No 204
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.18 E-value=3.3e-06 Score=88.03 Aligned_cols=37 Identities=30% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|||||||++|+++|..|++... +|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~---~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFD---DRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHG---GGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcC---CCCEEEEEecCC
Confidence 4799999999999999999998321 378999999975
No 205
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=2.3e-06 Score=88.22 Aligned_cols=101 Identities=23% Similarity=0.288 Sum_probs=74.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. . ....+...+.+.+++.+++++.+
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l~----------~-~~~~~~~~l~~~l~~~gv~i~~~ 238 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGR------IGSEVTVVEFASEIVP----------T-MDAEIRKQFQRSLEKQGMKFKLK 238 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHH------HTCEEEEECSSSSSST----------T-SCHHHHHHHHHHHHHSSCCEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCcccc----------c-ccHHHHHHHHHHHHHcCCEEEeC
Confidence 35899999999999999999998 5789999999876311 1 11233445667777889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcC---Cc--cEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g--~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.+++.+... ..+.+. ++ ..+.+|.||+|+|.+|...
T Consensus 239 ~~v~~i~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 239 TKVVGVDTSGDG-----------VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp EEEEEEECSSSS-----------EEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred CEEEEEEEcCCe-----------EEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 88888765321 123332 33 6899999999999888654
No 206
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.17 E-value=2.6e-06 Score=87.79 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++++.+.+. + ....+...+.+.+++.+++++.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~---~~~~~~~~l~~~l~~~Gv~i~~~~ 237 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFAR------LGSKVTVLARNTLFF---------R---EDPAIGEAVTAAFRAEGIEVLEHT 237 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTT---------T---SCHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCEEEEECCCHHHHHHHHHHHH------cCCEEEEEEECCccC---------C---CCHHHHHHHHHHHHhCCCEEEcCC
Confidence 5799999999999999999998 588999999987531 1 11234455667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~ 206 (500)
.|.+++.+... ..+.++ +..+.+|.||+|+|.+|...
T Consensus 238 ~v~~i~~~~~~-----------~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 238 QASQVAHMDGE-----------FVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp CEEEEEEETTE-----------EEEEET-TEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCE-----------EEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 88888654321 134554 45899999999999987643
No 207
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.17 E-value=3.9e-06 Score=86.85 Aligned_cols=102 Identities=18% Similarity=0.307 Sum_probs=77.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++++|||+|+.|+.+|..|++ .|.+|+++++.+.+.. .. ...+...+.+.+++.+++++.+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l~----------~~-~~~~~~~l~~~l~~~Gv~i~~~ 252 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHG------LGVKTTLLHRGDLILR----------NF-DYDLRQLLNDAMVAKGISIIYE 252 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------TS-CHHHHHHHHHHHHHHTCEEESS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH------cCCeEEEEECCCcccc----------cc-CHHHHHHHHHHHHHCCCEEEeC
Confidence 35799999999999999999998 5889999999876321 11 1223445666777789999985
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~ 207 (500)
.|.++...... ..+.+.++..+.+|.||+|+|.+|....
T Consensus 253 ~~V~~i~~~~~~-----------v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 253 ATVSQVQSTENC-----------YNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp CCEEEEEECSSS-----------EEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred CEEEEEEeeCCE-----------EEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 88888765431 2577778889999999999998876543
No 208
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.16 E-value=3.1e-06 Score=89.09 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~------~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH------RQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 34799999999999999999999 6899999999763
No 209
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.14 E-value=8e-06 Score=78.21 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=72.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC---------CCCC----cchHHHHHHHHHhC-CcEEEcCce
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------PTGT----PGNREAALKVLSAR-KVQLVLGYF 310 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~---------~~~~----~~~~~~~~~~l~~~-gV~i~~~~~ 310 (500)
.+|+|||+|+.|+.+|..|++.+.+ |+++++..... +... ..+...+.+.+++. +++++.. .
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 78 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-R 78 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-C
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-E
Confidence 5899999999999999999998765 99999743211 1111 24455566677776 7888765 8
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++.++.++ +.+.+.+. +++++.+|.||+|+|..|..+
T Consensus 79 v~~i~~~~-----------------------~~~~v~~~------~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 79 VTDAKGSF-----------------------GEFIVEID------GGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCCCEEECC
T ss_pred EEEEEEcC-----------------------CeEEEEEC------CCCEEEcCEEEECCCCCCCCC
Confidence 88887754 44555542 567899999999999987644
No 210
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.14 E-value=4.4e-06 Score=87.68 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|+|||||++|+++|..|++.. .+|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~---~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRAL---QQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---CSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---CCCCEEEEECCCC
Confidence 479999999999999999999831 1488999999965
No 211
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.14 E-value=4.4e-06 Score=86.63 Aligned_cols=102 Identities=20% Similarity=0.294 Sum_probs=74.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+++|..|++ .|.+|+++++.+.+.. .. ...+...+.+.+++.+++++.+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~~-d~~~~~~l~~~l~~~gV~v~~~ 259 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWAR------LGAKVTVVEFLDTILG----------GM-DGEVAKQLQRMLTKQGIDFKLG 259 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSSS----------SS-CHHHHHHHHHHHHHTTCEEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCEEEEEeccccccc----------cC-CHHHHHHHHHHHHhCCCEEEEC
Confidence 35799999999999999999999 4789999999876321 11 1233445667777889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCC---c--cEEEecEEEEeCCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES---G--LIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~---g--~~~~~d~lIlAtG~~p~~~~ 207 (500)
.+.++...... ..+.+.+ + ..+.+|.||+|+|.+|....
T Consensus 260 ~~v~~i~~~~~~-----------~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 260 AKVTGAVKSGDG-----------AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEEEEETTE-----------EEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred CeEEEEEEeCCE-----------EEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 78888654321 1233321 3 58999999999999887543
No 212
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.14 E-value=3.2e-06 Score=87.87 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|+.|++ +|++|+|+|+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~------~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG------RGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCCEEEEECCC
Confidence 4799999999999999999999 799999999975
No 213
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1.7e-05 Score=78.59 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=74.1
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC-------C--------CCC----cchHHHHHHHHHhCCcEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------P--------TGT----PGNREAALKVLSARKVQL 305 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~-------~--------~~~----~~~~~~~~~~l~~~gV~i 305 (500)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. + .++ ..+.+.+.+.+++.++++
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 5899999999999999999887665 99999875431 1 111 344556667778889999
Q ss_pred EcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCC
Q 010827 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 306 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+.++.|+.++..++ +.+.+.+. +++++.+|.||+|+|..+
T Consensus 92 ~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 92 VLNETVTKYTKLDD----------------------GTFETRTN------TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp ECSCCEEEEEECTT----------------------SCEEEEET------TSCEEEEEEEEECCTTCS
T ss_pred EcCCEEEEEEECCC----------------------ceEEEEEC------CCcEEEeeEEEEccCCCc
Confidence 99999999987541 24555542 557899999999999843
No 214
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.12 E-value=1.3e-05 Score=77.58 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=72.4
Q ss_pred EEEEECCChhHHHHHHHHHHHHh-hcCeEEEEecCCc-----------cCCCCC-----cchHHHHHHHHHhCCcEEEcC
Q 010827 246 RVAVVGCGYSGVELAATVSERLE-EKGIVQAINVETT-----------ICPTGT-----PGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~-~~~~vtlv~~~~~-----------~~~~~~-----~~~~~~~~~~l~~~gV~i~~~ 308 (500)
+|+|||+|+.|+.+|..|++.+. + |+++++... ..+.++ ..+.+.+.+.+++.|++++.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~- 78 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM- 78 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-
T ss_pred eEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-
Confidence 79999999999999999998776 5 999998521 012221 23455666778888999998
Q ss_pred ceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 309 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
..+..++.++ +.+.+.+. ++.++.+|.||+|+|..|..+
T Consensus 79 ~~v~~i~~~~-----------------------~~~~v~~~------~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 79 TAVQRVSKKD-----------------------SHFVILAE------DGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp SCEEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEEEEcC-----------------------CEEEEEEc------CCCEEECCEEEECCCCCCCCC
Confidence 6888887644 44455432 557899999999999877643
No 215
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.11 E-value=6.6e-06 Score=86.54 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|||||||+||+++|..|++.. .+|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~---~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKAL---QGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT---TTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhc---CCCCcEEEEeCCC
Confidence 3589999999999999999999842 1588999999965
No 216
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.10 E-value=7.9e-06 Score=82.71 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=74.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC---------------------------C-----------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT---------------------------G----------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~---------------------------~----------- 286 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++.+.+... +
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 4899999999999999999998776 9999987653210 0
Q ss_pred --------------------------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccC
Q 010827 287 --------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKN 340 (500)
Q Consensus 287 --------------------------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (500)
...+.+.+.+.+++.||+++.+++|+++..++
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---------------------- 162 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA---------------------- 162 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET----------------------
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC----------------------
Confidence 01344556677788899999999999998754
Q ss_pred CcceeEeecccccCCCccEEeecEEEEecCCCC
Q 010827 341 SDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 341 ~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+++.+.+. ++ ++.+|.||+|+|..+
T Consensus 163 -~~~~V~~~------~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 163 -SGFRVTTS------AG-TVDAASLVVASGGKS 187 (417)
T ss_dssp -TEEEEEET------TE-EEEESEEEECCCCSS
T ss_pred -CEEEEEEC------Cc-EEEeeEEEECCCCcc
Confidence 55666642 34 899999999999876
No 217
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.10 E-value=1.1e-05 Score=84.27 Aligned_cols=40 Identities=28% Similarity=0.351 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhccc------CCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVW------QDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~------~~~~g~~V~lie~~~ 118 (500)
.++|||||||+||+.+|..|++... ....|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4799999999999999999998310 001489999999865
No 218
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.10 E-value=8.5e-06 Score=83.80 Aligned_cols=102 Identities=14% Similarity=0.215 Sum_probs=76.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++++|||+|+.|+++|..|++ .|.+|+++++.+.+. .. ....+...+.+.+++.+++++.+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vt~v~~~~~~l----------~~-~~~~~~~~l~~~l~~~Gv~i~~~ 231 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHG------LGVKTTLIYRGKEIL----------SR-FDQDMRRGLHAAMEEKGIRILCE 231 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS----------TT-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccc----------cc-cCHHHHHHHHHHHHHCCCEEECC
Confidence 36899999999999999999998 588999999987532 01 11233455667778889999985
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEE-cCCccEEEecEEEEeCCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVL-LESGLIVEYDWLVLSLGAEPKLDV 207 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~-~~~g~~~~~d~lIlAtG~~p~~~~ 207 (500)
.+.++...... ...+. +++++ +.+|.||+|+|.+|....
T Consensus 232 ~~v~~i~~~~~~----------~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 232 DIIQSVSADADG----------RRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp CCEEEEEECTTS----------CEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred CEEEEEEEcCCC----------EEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 88888765321 01466 77886 999999999998876543
No 219
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.07 E-value=4.9e-06 Score=87.63 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||+|||||++|+++|..|++ +|++|+|+|+.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~------~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV------RGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEECCC
Confidence 4899999999999999999999 799999999985
No 220
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.07 E-value=2.2e-05 Score=76.49 Aligned_cols=99 Identities=11% Similarity=0.051 Sum_probs=71.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc-----------cCCCCC-----cchHHHHHHHHHhCCcEEEcC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-----------ICPTGT-----PGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~-----------~~~~~~-----~~~~~~~~~~l~~~gV~i~~~ 308 (500)
++|+|||+|+.|+.+|..|++.+.+ |+++++... ..+.++ ..+.+.+.+.+++.|++++.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~- 84 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM- 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-
Confidence 5899999999999999999987765 999998621 011221 23455566778889999987
Q ss_pred ceEEEEecC--ccccccccCCCCCcccccccccCCcc-eeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 309 YFVRCIRRV--GEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 309 ~~v~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
..+..++.+ + +. +.+.+. ++.++.+|.||+|+|..|..+
T Consensus 85 ~~v~~i~~~~~~-----------------------~~~~~v~~~------~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 85 DEVQGVQHDATS-----------------------HPYPFTVRG------YNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp CCEEEEEECTTS-----------------------SSCCEEEEE------SSCEEEEEEEEECCCEEECCC
T ss_pred eeEEEEEeccCC-----------------------CceEEEEEC------CCCEEEeCEEEECcCCCcCCC
Confidence 578888764 2 22 333322 557899999999999987643
No 221
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.06 E-value=1.1e-05 Score=78.36 Aligned_cols=99 Identities=17% Similarity=0.280 Sum_probs=70.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.. ...+...+.+.+++.+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~gv~i~~~~ 205 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSN------IASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGNIILHTNR 205 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT------TSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSSEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCCeEEEcCc
Confidence 4799999999999999999988 5889999999876321 1122334455666789999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCC----c--cEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES----G--LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~----g--~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.++..+... + ..+.+.+ + ..+.+|.||+|+|.+|...
T Consensus 206 ~v~~i~~~~~~------v----~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 206 TLEEVTGDQMG------V----TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEEEEEECSSS------E----EEEEEECCTTCCCCEEEECSEEEECSCEEESCG
T ss_pred eeEEEEcCCCc------e----EEEEEEeccCCCceEEEEcCEEEEEeCCCCChH
Confidence 88888765421 0 0133322 3 5799999999999887643
No 222
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.06 E-value=1e-05 Score=83.48 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=73.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+++|..|++ .|.+|+++++.+.+. .. ....+...+.+.+++.+++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~-~d~~~~~~~~~~l~~~gv~i~~~~ 249 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSA------LGSKTSLMIRHDKVL----------RS-FDSMISTNCTEELENAGVEVLKFS 249 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC----------TT-SCHHHHHHHHHHHHHTTCEEETTE
T ss_pred CccEEEECCCHHHHHHHHHHHH------cCCeEEEEEeCCccc----------cc-cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5899999999999999999999 588999999987632 11 11223445667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCC-------ccEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES-------GLIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-------g~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.++.....- .. ..+.+.+ +..+.+|.||+|+|.+|...
T Consensus 250 ~v~~i~~~~~~------~~---~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 250 QVKEVKKTLSG------LE---VSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEEEECSSS------EE---EEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEcCCC------cE---EEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 78888654220 00 1344433 25789999999999887654
No 223
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.06 E-value=2.3e-06 Score=87.23 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=70.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC-----------CCcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-----------GTPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-----------~~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
++|+|||+|..|+.+|..|++.+. ...|+++++.+.+... ....+...+.+.+++.||+++.+ .++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 699999999999999999998322 1239999998765321 01111122334566789999975 8888
Q ss_pred EecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++.+. ..+.+. +++++.+|.+|+|+|.+|+.+
T Consensus 81 id~~~-----------------------~~v~~~--------~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPDA-----------------------NTVTTQ--------SGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTT-----------------------TEEEET--------TCCEEECSEEEECCCCEEECC
T ss_pred EECCC-----------------------CEEEEC--------CCcEEECCEEEEcCCcccccC
Confidence 88744 444443 567899999999999987754
No 224
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.06 E-value=1e-05 Score=78.50 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=33.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~ 121 (500)
.+||+|||||++|+++|..|++.. +|++|+|+|+.+...
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~----~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNR----PDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC----TTSCEEEECSSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcC----CCCeEEEEecCcccc
Confidence 369999999999999999999831 389999999987543
No 225
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.04 E-value=2.8e-05 Score=79.91 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=72.2
Q ss_pred cEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCCccCC-------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVETTICP------------------------------------- 284 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~~~~~------------------------------------- 284 (500)
++|+|||+|+.|+.+|..|++ .+.+...|+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999988 4432223999998754310
Q ss_pred CC-------------C--cchHHHHHHHHHhCCcE--EEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEe
Q 010827 285 TG-------------T--PGNREAALKVLSARKVQ--LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (500)
Q Consensus 285 ~~-------------~--~~~~~~~~~~l~~~gV~--i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 347 (500)
.+ . ..+.+.+.+.+++.|++ ++.++.|+.++..++. +...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~---------------------~~~~V~ 141 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS---------------------QTFTVT 141 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT---------------------TEEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC---------------------CcEEEE
Confidence 00 0 12334456666777988 8999999999864310 234444
Q ss_pred ecccccCCCccEEeecEEEEecC--CCCCCC
Q 010827 348 LQPAIKGLESQIFEADLVLWTVG--SKPLLP 376 (500)
Q Consensus 348 ~~~~~~~~~~~~l~~D~vi~a~G--~~p~~~ 376 (500)
+.+.. .+...++.+|.||+|+| ..|..+
T Consensus 142 ~~~~~-~g~~~~~~~d~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 142 VQDHT-TDTIYSEEFDYVVCCTGHFSTPYVP 171 (464)
T ss_dssp EEETT-TTEEEEEEESEEEECCCSSSSBCCC
T ss_pred EEEcC-CCceEEEEcCEEEECCCCCCCCccC
Confidence 32100 11226789999999999 677654
No 226
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.04 E-value=1.4e-05 Score=83.42 Aligned_cols=98 Identities=11% Similarity=0.057 Sum_probs=73.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc------------------------------------C-CCC-
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI------------------------------------C-PTG- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~------------------------------------~-~~~- 286 (500)
++|+|||+|+.|+.+|..|++.+.+ |+++++.+.+ + ...
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 5899999999999999999997766 9999987432 0 000
Q ss_pred ------------------C----------------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcc
Q 010827 287 ------------------T----------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAI 332 (500)
Q Consensus 287 ------------------~----------------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~ 332 (500)
+ ..+.+.+.+.+++.|+++++++.|+++..++
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-------------- 250 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-------------- 250 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS--------------
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--------------
Confidence 0 2233455677788999999999999998754
Q ss_pred cccccccCCccee-EeecccccCCCccEEeecEEEEecCCCCC
Q 010827 333 PNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 333 ~~~~~~~~~~~v~-l~~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
+++. +.+. +++++.+|.||+|+|..+.
T Consensus 251 ---------~~v~gV~l~------~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 251 ---------GQITGVTLS------NGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp ---------SBEEEEEET------TSCEEECSCEEECCCTTCH
T ss_pred ---------CEEEEEEEC------CCCEEECCEEEECCCCChh
Confidence 3332 4432 6678999999999999884
No 227
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.02 E-value=3.1e-05 Score=76.73 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=70.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHh-hcCeEEEEecCCccC--------------CCC-----------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLE-EKGIVQAINVETTIC--------------PTG----------------------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~-~~~~vtlv~~~~~~~--------------~~~----------------------- 286 (500)
.+|+|||+|..|+.+|..|++.+. + |+++++.+ +. +.+
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~---v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITD---VIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCc---EEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 489999999999999999998776 4 99999874 10 000
Q ss_pred ----C--cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEE
Q 010827 287 ----T--PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (500)
Q Consensus 287 ----~--~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l 360 (500)
. ..+...+.+.+++.|++++.++.|.+++.++ +.+.+... ++ ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~g-~~ 130 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD-----------------------AYYTIATT------TE-TY 130 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-----------------------SSEEEEES------SC-CE
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC-----------------------CeEEEEeC------CC-EE
Confidence 0 1233445666778899999999999998754 34555532 23 58
Q ss_pred eecEEEEecCCCCC
Q 010827 361 EADLVLWTVGSKPL 374 (500)
Q Consensus 361 ~~D~vi~a~G~~p~ 374 (500)
.+|.||+|+|..+.
T Consensus 131 ~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 131 HADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEEECCCSTTS
T ss_pred EeCEEEECCCCCCc
Confidence 89999999998764
No 228
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.02 E-value=6.4e-06 Score=91.08 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
.+||+|||||++|+++|++|++ +|+ +|+|||+++.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~------~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVT------RGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEeCCCC
Confidence 4799999999999999999999 688 9999999763
No 229
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.02 E-value=1.8e-05 Score=81.01 Aligned_cols=104 Identities=15% Similarity=0.107 Sum_probs=72.0
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHh--hcCeEEEEecCCccCCC--C---------------------------------
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLE--EKGIVQAINVETTICPT--G--------------------------------- 286 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~--~~~~vtlv~~~~~~~~~--~--------------------------------- 286 (500)
.++|+|||+|++|+.+|..|++.+. + |+++++.+.+... .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~---V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQ---VTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSE---EEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCC---eEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 4699999999999999999998776 5 9999986533100 0
Q ss_pred -------------------------------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCccccc
Q 010827 287 -------------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNI 335 (500)
Q Consensus 287 -------------------------------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 335 (500)
...+.+.+.+.+++.++.++.+++|+.++..+
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~----------------- 145 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD----------------- 145 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-----------------
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-----------------
Confidence 00233444555666678889999999997654
Q ss_pred ccccCCcceeEeecccccCCCcc---EEeecEEEEecCC--CCCCC
Q 010827 336 AADKNSDKYILELQPAIKGLESQ---IFEADLVLWTVGS--KPLLP 376 (500)
Q Consensus 336 ~~~~~~~~v~l~~~~~~~~~~~~---~l~~D~vi~a~G~--~p~~~ 376 (500)
+.+.+.+.+. .+++ ++.+|.||+|+|. .|+.+
T Consensus 146 ------~~~~V~~~~~---~~G~~~~~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 146 ------GSWVVTYKGT---KAGSPISKDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp ------TEEEEEEEES---STTCCEEEEEESEEEECCCSSSSBCBC
T ss_pred ------CeEEEEEeec---CCCCeeEEEEeCEEEECCCCCCCCCCC
Confidence 4455544310 1133 7899999999998 56543
No 230
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.01 E-value=1.7e-05 Score=76.66 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=72.4
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC--ccC--------CCC----CcchHHHHHHHHHhCCcEEEcCceE
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET--TIC--------PTG----TPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~--~~~--------~~~----~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
+|+|||+|+.|+.+|..|++.+.+ |+++++.. ... ... .+.+...+.+.+++.|++++.++++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 79 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSA 79 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEE
Confidence 799999999999999999987665 99986531 100 010 1245566677788899999999999
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLL 375 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~ 375 (500)
+.++.+.... +...+.+. +++++.+|.+|+|+|..|..
T Consensus 80 ~~i~~~~~~~--------------------~~~~v~~~------~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 80 SKLIPAAVEG--------------------GLHQIETA------SGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEEECCSSTT--------------------CCEEEEET------TSCEEEEEEEEECCCEEECC
T ss_pred EEEEecccCC--------------------ceEEEEEC------CCCEEEeCEEEECcCCCcCC
Confidence 9997642100 24445432 55689999999999988764
No 231
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.01 E-value=3.2e-05 Score=74.67 Aligned_cols=100 Identities=14% Similarity=0.042 Sum_probs=71.3
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEE-EecCCcc------------CCCCC-----cchHHHHHHHHHhCCcEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQA-INVETTI------------CPTGT-----PGNREAALKVLSARKVQL 305 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtl-v~~~~~~------------~~~~~-----~~~~~~~~~~l~~~gV~i 305 (500)
.++|+|||+|+.|+.+|..|++.+.+ |++ +++. .+ .+.++ ..+...+.+.+++.++++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 46999999999999999999998766 888 8873 21 12222 345666777888899999
Q ss_pred EcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 306 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
+.+ .+..+ .++.. +.+.+.+. .++ ++.+|.+|+|+|..|..+
T Consensus 80 ~~~-~v~~i-~~~~~---------------------~~~~v~~~-----~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 80 EMV-GVEQI-LKNSD---------------------GSFTIKLE-----GGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp ECC-CEEEE-EECTT---------------------SCEEEEET-----TSC-EEEEEEEEECCCEEECCC
T ss_pred EEE-EEEEE-ecCCC---------------------CcEEEEEe-----cCC-EEEeCEEEEeeCCCCCCC
Confidence 998 78888 32200 23442121 133 899999999999987644
No 232
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.00 E-value=1e-05 Score=86.61 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|+||||||+||++|..|++. .|++|+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~-----~G~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAF-----PDIRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTC-----TTSCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHh-----CCCCEEEEeCCCC
Confidence 347999999999999999999872 3889999999763
No 233
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.99 E-value=2.3e-05 Score=82.01 Aligned_cols=36 Identities=14% Similarity=0.248 Sum_probs=33.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|+|||+|..|+.+|..|++ .+.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~------~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAP------EVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTT------TCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHh------hCCEEEEEECCCC
Confidence 45899999999999999999998 5889999999886
No 234
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.98 E-value=3.1e-05 Score=77.92 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=72.5
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC-----------------C-----------------------
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-----------------T----------------------- 285 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~-----------------~----------------------- 285 (500)
+|+|||+|..|+.+|..+++.+.+ |+++++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 799999999999999999998776 999998764310 0
Q ss_pred ------------------------CCcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCC
Q 010827 286 ------------------------GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNS 341 (500)
Q Consensus 286 ------------------------~~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (500)
....+.+.+.+.+++.||+++.++.++++..+++.. .
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~-------------------~ 143 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE-------------------K 143 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS-------------------S
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC-------------------C
Confidence 011223456677788899999999999997541000 0
Q ss_pred cceeEeecccccCCCccEEeecEEEEecCCCCC
Q 010827 342 DKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 342 ~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
+.+.++.. ++ ++.+|.||+|+|..+.
T Consensus 144 ~~~~v~~~------~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 144 VRFVLQVN------ST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CCEEEEET------TE-EEEESEEEECCCCSSC
T ss_pred CeEEEEEC------CC-EEECCEEEECCCCccC
Confidence 44666532 33 7999999999999874
No 235
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.97 E-value=4.3e-05 Score=76.19 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=73.4
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC--------------------------------------
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-------------------------------------- 285 (500)
..+|+|||+|..|+.+|..|++.+.+ |+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 35899999999999999999998766 9999987654210
Q ss_pred ------CC-----------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEee
Q 010827 286 ------GT-----------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (500)
Q Consensus 286 ------~~-----------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 348 (500)
++ ..+...+.+.+++.|++++.+++|++++. + + .+.+
T Consensus 88 g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-----------------------~--~v~~ 141 (379)
T 3alj_A 88 NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-----------------------G--RLTL 141 (379)
T ss_dssp TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-----------------------T--EEEE
T ss_pred CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-----------------------C--EEEE
Confidence 00 12355566777888999999999999976 2 4 4443
Q ss_pred cccccCCCccEEeecEEEEecCCCCC
Q 010827 349 QPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 349 ~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
. +++++.+|.||.|+|..+.
T Consensus 142 ~------~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 142 Q------TGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp T------TSCEEECSEEEECCCTTCH
T ss_pred C------CCCEEEcCEEEECCCccHH
Confidence 2 4568999999999998764
No 236
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.97 E-value=2e-05 Score=76.92 Aligned_cols=98 Identities=14% Similarity=0.063 Sum_probs=72.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEec----CCcc------------CCCCC-----cchHHHHHHHHHhCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINV----ETTI------------CPTGT-----PGNREAALKVLSARKV 303 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~----~~~~------------~~~~~-----~~~~~~~~~~l~~~gV 303 (500)
.+|+|||+|+.|+.+|..|++.+.+ |+++++ ...+ .+.++ ..+...+.+.+++.|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 5899999999999999999987665 999987 2211 11121 2445566677888999
Q ss_pred EEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 304 ~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
+++.++ +..++.++ +.+.+.+ ++.++.+|.||+|+|..|..+
T Consensus 86 ~~~~~~-v~~i~~~~-----------------------~~~~v~~-------~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 86 TIFTET-VTKVDFSS-----------------------KPFKLFT-------DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp EEECCC-CCEEECSS-----------------------SSEEEEC-------SSEEEEEEEEEECCCEEECCC
T ss_pred EEEEeE-EEEEEEcC-----------------------CEEEEEE-------CCcEEEcCEEEECCCCCcCCC
Confidence 999986 88887654 4555552 457899999999999987643
No 237
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.96 E-value=1.8e-05 Score=84.09 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||||||||+|||+||..|++ .|++|+|+||..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~------~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSE------AGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHH------CCCcEEEEeccC
Confidence 4799999999999999999999 689999999976
No 238
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.95 E-value=1.5e-05 Score=84.68 Aligned_cols=56 Identities=21% Similarity=0.195 Sum_probs=41.7
Q ss_pred CCceEeCCCcccCCCCCEEEeccccc--ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSA--LRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~--~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
-|.|.||...|+ +.|++||+|+|+. .+..+ +.-......++-.|+.|++++...+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~hGan-rl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGLHGAN-RLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSSSTTS-CCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccccCCC-CCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 588999999999 9999999999974 22111 11133456788889999999988763
No 239
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.94 E-value=2.3e-05 Score=83.00 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+||||||||+|||+||..|++ .|++|+|+||.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~------~G~~V~vlEK~~ 40 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQ------SGQTCALLSKVF 40 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCC
Confidence 4799999999999999999999 689999999975
No 240
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=1.9e-05 Score=81.67 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=71.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.+++++|||+|+.|+++|..|++ .|.+|+++++...+ .. . ..++...+.+.+++.+++++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~l----------~~-~-d~~~~~~l~~~l~~~Gv~i~~~ 247 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKG------LGYEPTVMVRSIVL----------RG-F-DQQMAELVAASMEERGIPFLRK 247 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSCSS----------TT-S-CHHHHHHHHHHHHHTTCCEEET
T ss_pred cCCcEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCCC----------cc-c-CHHHHHHHHHHHHhCCCEEEeC
Confidence 35789999999999999999999 58899999985321 11 0 1233445667777889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCCc-----cEEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESG-----LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-----~~~~~d~lIlAtG~~p~~~ 206 (500)
.+.++.....- ...+.+.++ ..+.+|.||+|+|.+|...
T Consensus 248 ~~v~~i~~~~~~----------~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 248 TVPLSVEKQDDG----------KLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEEEEECTTS----------CEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred CEEEEEEEcCCC----------cEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 78888653220 013444333 2789999999999887653
No 241
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.93 E-value=1.5e-05 Score=77.83 Aligned_cols=190 Identities=13% Similarity=0.061 Sum_probs=103.0
Q ss_pred cEEEEECCChhHHHHHHHHHHH--HhhcCeEEEEecCCccCCC---------------------------C---------
Q 010827 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPT---------------------------G--------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~--~~~~~~vtlv~~~~~~~~~---------------------------~--------- 286 (500)
..|+|||+|..|+.+|..|++. +.+ |+++++...+... +
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~ 156 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVV 156 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEE
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEE
Confidence 4899999999999999999987 655 9999987543210 0
Q ss_pred --CcchHHHHHHHHHh-CCcEEEcCceEEEEecCcccc---ccccCCCCCcccccccccCCcceeEeecccccC------
Q 010827 287 --TPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFE---ASVKQPESGAIPNIAADKNSDKYILELQPAIKG------ 354 (500)
Q Consensus 287 --~~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~------ 354 (500)
...+...+.+.+.+ .|++++.++.+.++..+++.. .+..+....- .+...-.++.+........
T Consensus 157 ~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~----~g~~rV~GVv~~~~~v~~~g~~~~~ 232 (344)
T 3jsk_A 157 KHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAED----EAKVRIAGVVTNWTLVSMHHDDQSA 232 (344)
T ss_dssp SCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------------CCEEEEEEEEEEHHHHTTSSSSSC
T ss_pred ecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccccc----CCCceEeEEEeeeeeeeccCCcccc
Confidence 01122444555666 599999999998886543100 0000000000 0000002333321100001
Q ss_pred CCccEEeecEEEEecCCCCCC-CC----CCCCCCccCCCCCCCCCceE----------eCCCcccCCCCCEEEecccccc
Q 010827 355 LESQIFEADLVLWTVGSKPLL-PH----VEPPNNRLHDLPLNARGQAE----------TDETLCVKGHPRIFALGDSSAL 419 (500)
Q Consensus 355 ~~~~~l~~D~vi~a~G~~p~~-~~----~~~~~~~~~~~~~~~~g~i~----------vd~~~~t~~~~~vyaiGD~~~~ 419 (500)
.+..++.++.||.|+|..... .+ +...+ +...-.|.-. |+.+-+. +|++|++|-++..
T Consensus 233 ~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~-----~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~~ 305 (344)
T 3jsk_A 233 MDPNTINAPVIISTTGHDGPFGAFSVKRLVSMK-----QMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELSE 305 (344)
T ss_dssp CBCEEEECSEEEECCCSSSSSSCHHHHHHHHTT-----SSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHHH
T ss_pred cCceEEEcCEEEECCCCCchhhHHHHHHHhhcC-----cccccCCCcccccccchhhhcccCceE--cCCEEEechhhHh
Confidence 145689999999999987641 11 11111 1100112111 1122222 7999999999864
Q ss_pred cCCCCCCC-CchHHHHHHHHHHHHHHHHHHHC
Q 010827 420 RDSSGRPL-PATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 420 ~~~~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
.+ |.++ .+....=...|+.+|+.|...|.
T Consensus 306 ~~--g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 306 ID--GANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp HH--TCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hc--CCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 33 2222 12222344899999999988775
No 242
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.93 E-value=2.4e-05 Score=84.58 Aligned_cols=98 Identities=18% Similarity=0.117 Sum_probs=72.7
Q ss_pred CCCeEEEEC--CcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEE
Q 010827 78 KKPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (500)
Q Consensus 78 ~~~~VvIIG--gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (500)
..++|+||| +|+.|+.+|..|++ .|.+|+++++.+.+. ...........+.+.+++.+|+++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~------~g~~Vtlv~~~~~l~----------~~~~~~~~~~~l~~~l~~~GV~i~ 585 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQ------KGYEVSIVTPGAQVS----------SWTNNTFEVNRIQRRLIENGVARV 585 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHH------TTCEEEEEESSSSTT----------GGGGGGTCHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHh------CCCeeEEEecccccc----------cccccchhHHHHHHHHHHCCCEEE
Confidence 346899999 99999999999999 588999999987631 111112234456677778899999
Q ss_pred Ee-eEEEEecCCCCCCCCCceeecCcEEE---cCCccEEEecEEEEeCCCCCC
Q 010827 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVL---LESGLIVEYDWLVLSLGAEPK 204 (500)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~---~~~g~~~~~d~lIlAtG~~p~ 204 (500)
.+ .|++++.+.. .+. ..++..+.+|.||+|+|.+|.
T Consensus 586 ~~~~V~~i~~~~~-------------~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 586 TDHAVVAVGAGGV-------------TVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp ESEEEEEEETTEE-------------EEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred cCcEEEEEECCeE-------------EEEEccCCeEEEEECCEEEECCCCCCC
Confidence 97 8888875432 232 235668999999999998875
No 243
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.92 E-value=3.7e-05 Score=74.58 Aligned_cols=98 Identities=15% Similarity=0.103 Sum_probs=71.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc---c--------CCCC----CcchHHHHHHHHHhCCcEEEcCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT---I--------CPTG----TPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~---~--------~~~~----~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
.+|+|||+|+.|+.+|..|++.+.+ |+++++... . .+.+ ...+.+.+.+.+++.|++++. .
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 92 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-V 92 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-C
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-e
Confidence 5899999999999999999988765 999998421 0 1111 123445566777888999998 6
Q ss_pred eEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 310 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
.+..++.++ +.+.+.. ++.++.+|.||+|+|..|..+
T Consensus 93 ~v~~i~~~~-----------------------~~~~v~~-------~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 93 EVRSIKKTQ-----------------------GGFDIET-------NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp CEEEEEEET-----------------------TEEEEEE-------SSSEEEEEEEEECCCEEECCC
T ss_pred eEEEEEEeC-----------------------CEEEEEE-------CCCEEEeCEEEECCCCCcccC
Confidence 888887644 4444542 345789999999999877643
No 244
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.91 E-value=3.3e-05 Score=77.56 Aligned_cols=98 Identities=16% Similarity=0.258 Sum_probs=72.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC---------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT--------------------------------------- 285 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~--------------------------------------- 285 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++.+.+...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 4899999999999999999998776 9999986543100
Q ss_pred ------C---------------CcchHHHHHHHHHhC-CcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcc
Q 010827 286 ------G---------------TPGNREAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK 343 (500)
Q Consensus 286 ------~---------------~~~~~~~~~~~l~~~-gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (500)
+ ...+.+.+.+.+++. |++++.+++|++++.++ ++
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~ 140 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-----------------------RH 140 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-----------------------TS
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-----------------------Cc
Confidence 0 012334455666666 89999999999998755 45
Q ss_pred e--eEeecccccCCCccEEeecEEEEecCCCCC
Q 010827 344 Y--ILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 344 v--~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
+ .+.+. +++++.+|.||.|+|....
T Consensus 141 v~g~v~~~------~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 141 AIDQVRLN------DGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp CEEEEEET------TSCEEEEEEEEECCCTTCH
T ss_pred eEEEEEEC------CCCEEECCEEEECCCCChH
Confidence 5 56543 4568999999999998764
No 245
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.90 E-value=4.5e-05 Score=73.90 Aligned_cols=184 Identities=15% Similarity=0.072 Sum_probs=102.7
Q ss_pred cEEEEECCChhHHHHHHHHHHH--HhhcCeEEEEecCCccCCCC------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPTG------------------------------------ 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~--~~~~~~vtlv~~~~~~~~~~------------------------------------ 286 (500)
.+|+|||+|+.|+.+|..|++. +.+ |+++++.+.+....
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~ 142 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVV 142 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEE
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEE
Confidence 4899999999999999999988 665 99999865543110
Q ss_pred --CcchHHHHHHHHHh-CCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccc------cCCCc
Q 010827 287 --TPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI------KGLES 357 (500)
Q Consensus 287 --~~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~------~~~~~ 357 (500)
...+...+.+.+.+ .||+++.++.+.++..+.+... ..+ .-.++.+...... ...+.
T Consensus 143 ~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~----g~~----------rV~GVvv~~~~v~~~g~~~~~~d~ 208 (326)
T 2gjc_A 143 KHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK----GEV----------TVAGVVTNWTLVTQAHGTQCCMDP 208 (326)
T ss_dssp SCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-------------------CEEEEEEEEHHHHTC---CCCCCC
T ss_pred cchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccC----CCc----------EEEEEEecceeecccccceeccCc
Confidence 01123344555666 4999999999999876421000 000 0023433211000 01145
Q ss_pred cEEee---------------cEEEEecCCCCCCC-CCCCCCCccCCCCCCC--CC----------ceEeCCCcccCCCCC
Q 010827 358 QIFEA---------------DLVLWTVGSKPLLP-HVEPPNNRLHDLPLNA--RG----------QAETDETLCVKGHPR 409 (500)
Q Consensus 358 ~~l~~---------------D~vi~a~G~~p~~~-~~~~~~~~~~~~~~~~--~g----------~i~vd~~~~t~~~~~ 409 (500)
.++.+ |.||.|+|...... ++..-. ..+.... .| ..+|+.+-+..-+|+
T Consensus 209 ~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~ 285 (326)
T 2gjc_A 209 NVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRI---VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDN 285 (326)
T ss_dssp EEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHH---HHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTT
T ss_pred eEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhc---cccccccccCceeccccccchhheeecCCCccccCC
Confidence 67889 99999999875421 111100 0000000 01 011222223125899
Q ss_pred EEEecccccccCCCCCCCC-chHHHHHHHHHHHHHHHHHHHC
Q 010827 410 IFALGDSSALRDSSGRPLP-ATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 410 vyaiGD~~~~~~~~~~~~~-~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
+|++|......+. .+.. .....-...|+.+|+.|...+.
T Consensus 286 ~~~~g~~~~~~~~--~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 286 MYFAGMEVAELDG--LNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp EEECTHHHHHHHT--CCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECChHHHHhcC--CCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 9999999864322 1111 2233345899999999988764
No 246
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.90 E-value=5e-05 Score=74.30 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=71.6
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc-----------cCCCCC-----cchHHHHHHHHHhCCcEEEc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-----------ICPTGT-----PGNREAALKVLSARKVQLVL 307 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~-----------~~~~~~-----~~~~~~~~~~l~~~gV~i~~ 307 (500)
.++|+|||+|+.|+.+|..|++.+.+ |+++++... ..+.++ +.+...+.+.+++.|++++.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 90 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRM 90 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 46899999999999999999987665 999985311 011221 24455666777889999999
Q ss_pred CceEEEEecCccccccccCCCCCcccccccccCCcceeE-eecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYIL-ELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 308 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++ +..++. . +.+.+ .+. +++++.+|.||+|+|..|..+
T Consensus 91 ~~-v~~i~~-~-----------------------~~~~v~~~~------~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 91 ED-VESVSL-H-----------------------GPLKSVVTA------DGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp CC-EEEEEC-S-----------------------SSSEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred ee-EEEEEe-C-----------------------CcEEEEEeC------CCCEEEeCEEEECCCCCccCC
Confidence 86 888776 2 33444 332 567899999999999987643
No 247
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.90 E-value=5.5e-06 Score=86.15 Aligned_cols=42 Identities=26% Similarity=0.327 Sum_probs=36.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
+..||||||||++||+||.+|++. .|++|+|+|+++++++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCe
Confidence 358999999999999999999873 589999999999877643
No 248
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.89 E-value=4.4e-05 Score=73.65 Aligned_cols=99 Identities=16% Similarity=0.225 Sum_probs=64.6
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc---cC---CCC-------CcchHHHHHHHHHhC-CcEEEcCceE
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT---IC---PTG-------TPGNREAALKVLSAR-KVQLVLGYFV 311 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~---~~---~~~-------~~~~~~~~~~~l~~~-gV~i~~~~~v 311 (500)
.|+|||+|+.|+.+|..+++.+.+ |+++++... +. +.+ ++++.+...+.+.+. ++.+... .+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 83 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQ---IALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK-TV 83 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC-CE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee-EE
Confidence 799999999999999999987776 999997531 10 111 123344444555554 4555544 44
Q ss_pred EEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
..+..... +.+.+.+. +++++.+|.||+|||.+|..+
T Consensus 84 ~~~~~~~~----------------------~~~~v~~~------~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 84 VMITKQST----------------------GLFEIVTK------DHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EEEEECTT----------------------SCEEEEET------TCCEEEEEEEEECCCCEEECC
T ss_pred EEeeecCC----------------------CcEEEEEC------CCCEEEeCEEEEccCCccccc
Confidence 44443221 34444432 678999999999999987644
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.88 E-value=1.8e-05 Score=81.44 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=67.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.. .....++...+.+.++ ++++.+
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~~~d~~~~~~l~~~l~---v~i~~~ 231 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRL------MGVQTHIIEMLDRALI----------TLEDQDIVNTLLSILK---LNIKFN 231 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCT----------TSCCHHHHHHHHHHHC---CCEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCcCCC----------CCCCHHHHHHHHhcCE---EEEEEC
Confidence 35799999999999999999999 5889999999876311 1101222233334443 777775
Q ss_pred -eEEEEecCC-CCCCCCCceeecCcEEEcC--Ccc--EEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSD-HLGVNGPMACTHGGTVLLE--SGL--IVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~-~~~~~~~~~~~~~~~v~~~--~g~--~~~~d~lIlAtG~~p~~~ 206 (500)
.+.++.... .. ..+.+. +|+ .+.+|.||+|+|.+|...
T Consensus 232 ~~v~~i~~~~~~~-----------v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 232 SPVTEVKKIKDDE-----------YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp CCEEEEEEEETTE-----------EEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred CEEEEEEEcCCCc-----------EEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 777776532 10 134444 454 799999999999888765
No 250
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.88 E-value=3.9e-05 Score=80.44 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=74.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC--------CC-------------C----------------C
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PT-------------G----------------T 287 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~--------~~-------------~----------------~ 287 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++.+.+. +. + .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 5899999999999999999886665 99999865432 00 0 1
Q ss_pred cchHHHHHHHHHhCCc--EEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEE
Q 010827 288 PGNREAALKVLSARKV--QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (500)
Q Consensus 288 ~~~~~~~~~~l~~~gV--~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~v 365 (500)
+++.+.+.+.+++.++ .++.+++|++++.+++. +.+.+.+. +++++.+|.|
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------------------~~w~V~~~------~G~~i~ad~l 151 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG---------------------LRWTVRTD------RGDEVSARFL 151 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT---------------------TEEEEEET------TCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC---------------------CEEEEEEC------CCCEEEeCEE
Confidence 2455666777788888 89999999998764410 34555542 6678999999
Q ss_pred EEecC--CCCCCC
Q 010827 366 LWTVG--SKPLLP 376 (500)
Q Consensus 366 i~a~G--~~p~~~ 376 (500)
|+|+| .+|..+
T Consensus 152 V~AtG~~s~p~~p 164 (549)
T 4ap3_A 152 VVAAGPLSNANTP 164 (549)
T ss_dssp EECCCSEEECCCC
T ss_pred EECcCCCCCCCCC
Confidence 99999 556544
No 251
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.88 E-value=3.3e-05 Score=79.95 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=70.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.+++++|||||+.|+++|..|++ .|.+|+++++...+ .. . ..++...+.+.+++.+++++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~l----------~~-~-d~~~~~~l~~~l~~~gv~~~~~ 245 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTG------IGLDTTVMMRSIPL----------RG-F-DQQMSSLVTEHMESHGTQFLKG 245 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSS----------TT-S-CHHHHHHHHHHHHHTTCEEEET
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCceEEEEcCccc----------cc-C-CHHHHHHHHHHHHHCCCEEEeC
Confidence 35789999999999999999999 58899999986421 11 0 1233455667777889999986
Q ss_pred -eEEEEecCCCCCCCCCceeecCcEEEcCC---cc--EEEecEEEEeCCCCCCCC
Q 010827 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES---GL--IVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~---g~--~~~~d~lIlAtG~~p~~~ 206 (500)
.+..+.....- ...+...+ ++ .+.+|.||+|+|.+|...
T Consensus 246 ~~v~~i~~~~~~----------~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 246 CVPSHIKKLPTN----------QLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEEEEECTTS----------CEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred CEEEEEEEcCCC----------cEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 77777643210 01233322 43 478999999999887654
No 252
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.87 E-value=6e-05 Score=78.61 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=74.2
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC--ccCC--------C----CCcchHHHHHHHHHhCCcEEEcCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET--TICP--------T----GTPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~--~~~~--------~----~~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
..+|+|||||+.|+.+|..|++.+.+ |+++++.. .... . ..+.+...+.+.+++.|++++.++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 46899999999999999999987765 99987531 1110 0 113456667777888999999999
Q ss_pred eEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCC
Q 010827 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLL 375 (500)
Q Consensus 310 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~ 375 (500)
+++.+..+.... +...+.+. ++.++.+|.||+|+|..|..
T Consensus 289 ~v~~i~~~~~~~--------------------~~~~V~~~------~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 289 SASKLVPAATEG--------------------GLHQIETA------SGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp CEEEEECCSSTT--------------------SCEEEEET------TSCEEEEEEEEECCCEEECC
T ss_pred EEEEEEeccCCC--------------------ceEEEEEC------CCCEEEcCEEEECCCCCcCC
Confidence 999997532100 24445432 56789999999999987653
No 253
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.85 E-value=1.3e-05 Score=81.26 Aligned_cols=41 Identities=27% Similarity=0.408 Sum_probs=36.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~~ 124 (500)
.++||+|||||++||+||..|++ .| ++|+|+|++++++.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~------~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ------AGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEECCCCCCCcc
Confidence 45899999999999999999999 68 8999999998876543
No 254
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.84 E-value=8.2e-05 Score=74.68 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=31.6
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
..+|+|||+|.+|+.+|..|++.+.+ |+++++.+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~ 40 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQP 40 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCC
Confidence 46899999999999999999998766 9999987653
No 255
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.80 E-value=8.3e-05 Score=71.90 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=68.8
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc---c--------CCCCC----cchHHHHHHHHHhCCcEEEcCce
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT---I--------CPTGT----PGNREAALKVLSARKVQLVLGYF 310 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~---~--------~~~~~----~~~~~~~~~~l~~~gV~i~~~~~ 310 (500)
.|+|||+|+.|+.+|..|++.+.+ |+++++... . .+.+. +++.........+.++.+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLK---TVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDI 84 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceee
Confidence 799999999999999999998876 999987431 0 01111 23445556667778888887766
Q ss_pred EEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCC
Q 010827 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (500)
Q Consensus 311 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~ 377 (500)
........ ...+. .+++++.+|.+|+|||.+|..+-
T Consensus 85 ~~~~~~~~------------------------~~~~~-------~~~~~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 85 KSVEDKGE------------------------YKVIN-------FGNKELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp CEEEECSS------------------------CEEEE-------CSSCEEEEEEEEECCCEEECCCC
T ss_pred eeeeeeec------------------------ceeec-------cCCeEEEeceeEEcccCccCcCC
Confidence 65554422 22222 26788999999999999876443
No 256
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.79 E-value=2.9e-05 Score=80.58 Aligned_cols=103 Identities=22% Similarity=0.294 Sum_probs=71.3
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCC--------CCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQD--------DKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTG 151 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~--------~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 151 (500)
.+++|||||+.|+++|..|+++.... ....+|+|+|..+.+. ..+ ...+.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il----------~~~-~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL----------NMF-EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS----------TTS-CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc----------cCC-CHHHHHHHHHHHHhcc
Confidence 47999999999999999887642100 0246899999998731 111 1334455667788889
Q ss_pred cEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCc----cEEEecEEEEeCCCCCC
Q 010827 152 VQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG----LIVEYDWLVLSLGAEPK 204 (500)
Q Consensus 152 v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g----~~~~~d~lIlAtG~~p~ 204 (500)
|+++.+ .|++++.+... .....+++ +++.+|.||.|+|.+|.
T Consensus 287 V~v~~~~~v~~v~~~~~~-----------~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVHLRTAVAKVEEKQLL-----------AKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEETTEEEEEECSSEEE-----------EEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred eeeecCceEEEEeCCceE-----------EEEEecCcccceeeeccCEEEEccCCcCC
Confidence 999986 78888765321 12233444 36899999999998765
No 257
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.79 E-value=5e-05 Score=79.17 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=67.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
+++++|||||+.|+++|..|++ .|.+|+++++...+ .. . ..++...+.+.+++.+|+++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~------~G~~Vtlv~~~~~l----------~~-~-d~~~~~~~~~~l~~~GV~v~~~~ 271 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAG------IGLDVTVMVRSILL----------RG-F-DQDMANKIGEHMEEHGIKFIRQF 271 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSS----------TT-S-CHHHHHHHHHHHHHTTCEEEESE
T ss_pred CCeEEEECCcHHHHHHHHHHHH------cCCeEEEEeccccc----------cc-C-CHHHHHHHHHHHHHCCCEEEeCC
Confidence 5689999999999999999999 58899999985221 11 1 1234455667777889999986
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCc---cEEEecEEEEeCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG---LIVEYDWLVLSLGAEPKLD 206 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g---~~~~~d~lIlAtG~~p~~~ 206 (500)
.+..+...... ....+.+ .+...++ ..+.+|.||+|+|.+|...
T Consensus 272 ~v~~v~~~~~~--~~~~~~v---~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 272 VPIKVEQIEAG--TPGRLRV---VAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp EEEEEEEEECC--TTCEEEE---EEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred eEEEEEEccCC--CCceEEE---EEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 55555432110 0000010 1222333 2568999999999887654
No 258
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.79 E-value=2.3e-05 Score=77.80 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=36.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC-CCcccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ERFVFK 123 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~-~~~~~~ 123 (500)
...++|+|||||++||+||+.|++ .|++|+|+|++ +.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~------~G~~V~VlE~~~~~vGGr 83 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR------AGHDVTILEANANRVGGR 83 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH------TSCEEEEECSCSSCCBTT
T ss_pred CCCceEEEECCCHHHHHHHHHHHH------CCCcEEEEeccccccCCc
Confidence 456899999999999999999999 68999999999 776554
No 259
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.78 E-value=1.5e-05 Score=81.16 Aligned_cols=35 Identities=31% Similarity=0.416 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++++|+||||||+|+++|..|++ .|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~------~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ------HDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH------TTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCeEEEEcCCC
Confidence 45899999999999999999999 799999999986
No 260
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.77 E-value=0.00012 Score=71.45 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=30.3
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 4899999999999999999998776 999998754
No 261
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.77 E-value=5.1e-05 Score=77.81 Aligned_cols=109 Identities=17% Similarity=0.053 Sum_probs=70.7
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhc--CeEEEEecCCccCCC---------C----------------------------
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEK--GIVQAINVETTICPT---------G---------------------------- 286 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~--~~vtlv~~~~~~~~~---------~---------------------------- 286 (500)
+|+|||+|+.|+.+|..|++.+... ..|+++++.+.+... +
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999988330 129999987643200 0
Q ss_pred --------------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCc--ceeEeecc
Q 010827 287 --------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD--KYILELQP 350 (500)
Q Consensus 287 --------------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~l~~~~ 350 (500)
..++.+.+....++.+++++.+++|++++...+.. + .+.+.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~--------------------~~~~~~V~~~~ 171 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAG--------------------QVEALRVISRN 171 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETT--------------------EEEEEEEEEEE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCC--------------------ceEEEEEEEec
Confidence 01122333444556689999999999987642100 2 13444321
Q ss_pred cccCCCccEEeecEEEEecCCCCCCC
Q 010827 351 AIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 351 ~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
..++..++.+|.||+|+|..|..+
T Consensus 172 --g~g~~~~~~~d~lVlAtG~~p~~p 195 (463)
T 3s5w_A 172 --ADGEELVRTTRALVVSPGGTPRIP 195 (463)
T ss_dssp --TTSCEEEEEESEEEECCCCEECCC
T ss_pred --CCCceEEEEeCEEEECCCCCCCCc
Confidence 111223889999999999877643
No 262
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.77 E-value=0.00011 Score=73.45 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=72.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC--------------------C-----------------CC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP--------------------T-----------------GT 287 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~--------------------~-----------------~~ 287 (500)
.+|+|||||..|+-+|..|++.+.+ |+++++...+.. . ..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~---V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 3899999999999999999998776 999998663211 0 00
Q ss_pred --------------------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCccee-E
Q 010827 288 --------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-L 346 (500)
Q Consensus 288 --------------------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-l 346 (500)
..+...+.+.+++.|++++.+++|+++..++ +.+. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~v~gv 138 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-----------------------GKVAGA 138 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-----------------------TEEEEE
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-----------------------CEEEEE
Confidence 0122445666777899999999999998754 4443 4
Q ss_pred eecccccCCCccEEeecEEEEecCCCC
Q 010827 347 ELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 347 ~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
.+. ..+++.++.+|.||.|+|...
T Consensus 139 ~~~---~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 139 KIR---HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEE---ETTEEEEEEEEEEEECCCTTC
T ss_pred EEE---ECCeEEEEEcCEEEECCCcch
Confidence 332 223567899999999999764
No 263
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.76 E-value=2e-05 Score=81.11 Aligned_cols=40 Identities=33% Similarity=0.457 Sum_probs=35.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCCCcccCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVFKP 124 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~~~~ 124 (500)
++||+|||||++||+||++|++ +|+ +|+|+|+++..++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~------~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSR------APCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHT------SSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHh------CCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999999 688 999999998766544
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.75 E-value=0.00014 Score=70.23 Aligned_cols=101 Identities=11% Similarity=-0.010 Sum_probs=70.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc----------------CCCCC-----cchHHHHHHHHHhCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI----------------CPTGT-----PGNREAALKVLSARKV 303 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~----------------~~~~~-----~~~~~~~~~~l~~~gV 303 (500)
..|+|||+|+.|+.+|..+++.+.+ |+++++.... .+.++ +++...+.+.+++.++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~ 81 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGT 81 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCc
Confidence 4799999999999999999998776 9999875421 01121 2345666777888999
Q ss_pred EEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCCCC
Q 010827 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (500)
Q Consensus 304 ~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~ 378 (500)
++.... +..+.... +...+.. .++.++.+|.||+|||.+|..+.+
T Consensus 82 ~~~~~~-v~~~~~~~-----------------------~~~~~~~------~~~~~~~~~~liiATG~~~~~~~i 126 (314)
T 4a5l_A 82 TIITET-IDHVDFST-----------------------QPFKLFT------EEGKEVLTKSVIIATGATAKRMHV 126 (314)
T ss_dssp EEECCC-EEEEECSS-----------------------SSEEEEE------TTCCEEEEEEEEECCCEEECCCCC
T ss_pred EEEEeE-EEEeecCC-----------------------CceEEEE------CCCeEEEEeEEEEcccccccccCC
Confidence 988764 44444433 2333332 277889999999999988764433
No 265
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.74 E-value=1.9e-05 Score=81.32 Aligned_cols=45 Identities=27% Similarity=0.449 Sum_probs=35.6
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 74 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
||....+||+|||||++||+||..|++ .|++|+|+|+++..+...
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~------~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRS------RGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHT------TTCCEEEECSSSSSBTTC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCcee
Confidence 566677899999999999999999998 689999999999866544
No 266
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.74 E-value=6.7e-05 Score=78.61 Aligned_cols=102 Identities=18% Similarity=0.248 Sum_probs=72.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC--------C-----------------------C----C--C
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------P-----------------------T----G--T 287 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~--------~-----------------------~----~--~ 287 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++.+.+. + . + .
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 5899999999999999999886655 99999875431 0 0 0 1
Q ss_pred cchHHHHHHHHHhCCc--EEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEE
Q 010827 288 PGNREAALKVLSARKV--QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (500)
Q Consensus 288 ~~~~~~~~~~l~~~gV--~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~v 365 (500)
+++...+.+.+++.++ .+..+++|++++.+++. +...+++. +++++.+|.|
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------------------~~w~V~~~------~G~~~~ad~l 139 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------------------RLWEVTLD------NEEVVTCRFL 139 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------------------TEEEEEET------TTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------------------CEEEEEEC------CCCEEEeCEE
Confidence 3455666677777787 78899999998754310 34555542 6678999999
Q ss_pred EEecC--CCCCCC
Q 010827 366 LWTVG--SKPLLP 376 (500)
Q Consensus 366 i~a~G--~~p~~~ 376 (500)
|+|+| .+|..+
T Consensus 140 V~AtG~~s~p~~p 152 (545)
T 3uox_A 140 ISATGPLSASRMP 152 (545)
T ss_dssp EECCCSCBC---C
T ss_pred EECcCCCCCCcCC
Confidence 99999 566544
No 267
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.72 E-value=1.5e-05 Score=83.09 Aligned_cols=41 Identities=24% Similarity=0.427 Sum_probs=36.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~~ 124 (500)
..++|+|||||++||+||..|++ .| ++|+|+|++++++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~------~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ------NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH------TTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------cCCCCEEEEeCCCCCCCce
Confidence 34799999999999999999999 68 9999999999866653
No 268
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.72 E-value=2.4e-05 Score=80.08 Aligned_cols=66 Identities=21% Similarity=0.216 Sum_probs=53.1
Q ss_pred CccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc-------CCCC--CcchHHHHHHHHHhCCcEEEcCceE
Q 010827 243 SLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI-------CPTG--TPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 243 ~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~-------~~~~--~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
.+++|+|||+|+.|+.+|..|++.+.+ |+++++.+.+ .+.+ +..+.....+.+++.||+++.++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v 195 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEV 195 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEe
Confidence 367999999999999999999998776 9999997754 2332 3445666678889999999998765
No 269
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.71 E-value=3.8e-05 Score=79.41 Aligned_cols=41 Identities=27% Similarity=0.405 Sum_probs=36.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
...++|+|||||++||+||..|++ .|++|+|+|+++..+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~------~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK------AGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeccCCCCCc
Confidence 346899999999999999999999 68999999999876554
No 270
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.70 E-value=8.5e-05 Score=77.77 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=40.6
Q ss_pred CCceEeCCCcccCCCCCEEEecccccc-cCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~~-~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
-|.|.||...|+ ..|++||+|+|+.. .....+.-......++--|+.|++++...+.
T Consensus 354 ~GGi~vd~~~~t-~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 354 CGGVMVDDHGRT-DVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp SCEEECCTTCBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCcEEECCCCCC-ccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 478999999998 89999999999842 1111111134566788889999999887653
No 271
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.70 E-value=0.00013 Score=74.47 Aligned_cols=97 Identities=23% Similarity=0.226 Sum_probs=71.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC-----------------------CC---------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-----------------------TG--------------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~-----------------------~~--------------- 286 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++.+.+.. .+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~---V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGAN---VLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 4799999999999999999988765 999998653210 00
Q ss_pred -----------------------------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCccccccc
Q 010827 287 -----------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (500)
Q Consensus 287 -----------------------------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (500)
...+.+.+.+.+++.||+++++++|+++..++
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~------------------- 164 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN------------------- 164 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-------------------
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-------------------
Confidence 01122345566778899999999999997543
Q ss_pred ccCCcc-eeEeecccccCCCccEEeecEEEEecCCCC
Q 010827 338 DKNSDK-YILELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 338 ~~~~~~-v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+. +.+.+. +++++.+|.||+|+|..+
T Consensus 165 ----~~v~~V~~~------~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 165 ----GQTKAVILQ------TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp ----TEEEEEEET------TCCEEECSCEEECCCCSS
T ss_pred ----CcEEEEEEC------CCCEEECCEEEECCCCCc
Confidence 33 444432 445799999999999877
No 272
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.70 E-value=0.00012 Score=73.99 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=69.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC----CCCC---------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC----PTGT--------------------------------- 287 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~----~~~~--------------------------------- 287 (500)
.+|+|||||.+|+-+|..|++.+.+ |+++++..... ..+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFK---VKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 4899999999999999999988766 99999864211 0000
Q ss_pred -----------------------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcc-
Q 010827 288 -----------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK- 343 (500)
Q Consensus 288 -----------------------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 343 (500)
..+...+.+.+++.|++++.++.|++++.++ ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~~ 139 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFG-----------------------TDS 139 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-----------------------TEE
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEE
Confidence 1233445566677799999999999998654 33
Q ss_pred -eeEeecccccCCCcc--EEeecEEEEecCCCC
Q 010827 344 -YILELQPAIKGLESQ--IFEADLVLWTVGSKP 373 (500)
Q Consensus 344 -v~l~~~~~~~~~~~~--~l~~D~vi~a~G~~p 373 (500)
+.+... +++ ++.+|.||.|+|...
T Consensus 140 ~v~v~~~------~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 140 VTTIEDI------NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEET------TSCEEEEEEEEEEECCGGGC
T ss_pred EEEEEcC------CCCEEEEEcCEEEECCCCch
Confidence 334321 444 799999999999764
No 273
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.68 E-value=3.1e-05 Score=79.35 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=36.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
..+||||||||++||+||..|++ .|++|+|+|++++++...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~------~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSV------DGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCCCCCccc
Confidence 45899999999999999999999 799999999999876654
No 274
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.68 E-value=8e-05 Score=79.11 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=66.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||||+.|+.+|..|++ .|.+|+++++... +.. . ...+...+.+.+++.+++++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~----------l~~-~-d~~~~~~~~~~l~~~gv~i~~~~ 347 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLAS------LGGDVTVMVRSIL----------LRG-F-DQQMAEKVGDYMENHGVKFAKLC 347 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCS----------STT-S-CHHHHHHHHHHHHHTTCEEEETE
T ss_pred CCEEEEECCCHHHHHHHHHHHH------cCCEEEEEECCcC----------cCc-C-CHHHHHHHHHHHHhCCCEEEECC
Confidence 4689999999999999999999 5789999998721 111 0 1123344556677789999986
Q ss_pred eEEEEecC-----CCCCCCCCceeecCcEEEcCCccEEE--ecEEEEeCCCCCCC
Q 010827 158 RVKLLCPS-----DHLGVNGPMACTHGGTVLLESGLIVE--YDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~~-----~~~~~~~~~~~~~~~~v~~~~g~~~~--~d~lIlAtG~~p~~ 205 (500)
.+..+... ..- ....+.+ .+...++..+. +|.||+|+|.+|..
T Consensus 348 ~v~~v~~~~~~~~~~~--~~~~~~v---~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 348 VPDEIKQLKVVDTENN--KPGLLLV---KGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp EEEEEEEEECCBTTTT--BCCEEEE---EEEETTSCEEEEEESEEEECSCEEECG
T ss_pred eEEEEEeccccccccC--CCceEEE---EEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 45555321 000 0000100 12234565554 99999999988764
No 275
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.68 E-value=0.00024 Score=71.10 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=70.9
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc------CCC--------------C-------------------
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI------CPT--------------G------------------- 286 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~------~~~--------------~------------------- 286 (500)
+|+|||+|..|+.+|..|++.+.+ |+++++.+.. ... .
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 799999999999999999998876 9999986531 000 0
Q ss_pred --------------------C-cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCccee
Q 010827 287 --------------------T-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI 345 (500)
Q Consensus 287 --------------------~-~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 345 (500)
+ ..+...+.+.+.+.|++++.+++|++++.+++ +.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~----------------------~~~~ 138 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG----------------------ERPY 138 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS----------------------SSCE
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC----------------------CceE
Confidence 0 11233455666678999999999999986431 3344
Q ss_pred EeecccccCCCcc--EEeecEEEEecCCCCC
Q 010827 346 LELQPAIKGLESQ--IFEADLVLWTVGSKPL 374 (500)
Q Consensus 346 l~~~~~~~~~~~~--~l~~D~vi~a~G~~p~ 374 (500)
+.+. . +++ ++.+|.||.|.|....
T Consensus 139 v~~~---~--~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 139 VTFE---R--DGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp EEEE---E--TTEEEEEECSEEEECCCTTCS
T ss_pred EEEe---c--CCcEEEEEeCEEEECCCCCcH
Confidence 4431 0 344 7899999999998765
No 276
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.67 E-value=2.8e-05 Score=78.25 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=36.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCC-CCeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDK-KPQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~-g~~V~lie~~~~~~~~~ 124 (500)
..+||+|||||++||+||..|++ . |++|+|+|++++++...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~------~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVAT------QLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH------HSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHH------hCCCCEEEEeCCCCCCCee
Confidence 35899999999999999999998 5 89999999998866544
No 277
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.66 E-value=0.00015 Score=72.11 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=29.0
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++.
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKN---TALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCC
Confidence 5899999999999999999998766 9999874
No 278
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.66 E-value=0.00018 Score=71.53 Aligned_cols=100 Identities=14% Similarity=0.003 Sum_probs=69.8
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCC------C--------------------------------
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG------T-------------------------------- 287 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~------~-------------------------------- 287 (500)
.|+|||+|++|+-+|..|++.+.+ |+++++.+.+.... .
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 699999999999999999998877 99999865432100 0
Q ss_pred -------------------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEee
Q 010827 288 -------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (500)
Q Consensus 288 -------------------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 348 (500)
..+...+.+.+.+.|++++.++.++.+..++ +.+....
T Consensus 83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-----------------------~~~~~v~ 139 (397)
T 3oz2_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-----------------------GKVAGAK 139 (397)
T ss_dssp CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-----------------------TEEEEEE
T ss_pred EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-----------------------ceeeeee
Confidence 1123445566677899999999999887654 2322111
Q ss_pred cccccCCCccEEeecEEEEecCCCC
Q 010827 349 QPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 349 ~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
. ..+++..++.+|+||-|.|...
T Consensus 140 ~--~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 140 I--RHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp E--EETTEEEEEEEEEEEECCCTTC
T ss_pred e--cccccceEEEEeEEEeCCcccc
Confidence 0 0223456789999999999653
No 279
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.65 E-value=0.00011 Score=72.20 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=28.6
Q ss_pred cEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~ 280 (500)
++|+|||+|.+|+-+|..|++ .+.+ |+++++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce---EEEEECCC
Confidence 489999999999999999987 5555 99999764
No 280
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.64 E-value=1.9e-05 Score=80.92 Aligned_cols=45 Identities=31% Similarity=0.448 Sum_probs=35.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
++||+|||||++||+||++|++.+....++++|+|+|+++..+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999942111122899999999876543
No 281
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.60 E-value=5.2e-05 Score=75.07 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+.+||+|||||++|+++|++|++ +|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~------~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR------KGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCEEEEEeccC
Confidence 35799999999999999999998 799999999975
No 282
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.57 E-value=0.00026 Score=71.22 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=31.1
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
..+|+|||||.+|+-+|..|++.+.+ |+++++.+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~ 57 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKE 57 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 35899999999999999999998876 999998764
No 283
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.57 E-value=0.00033 Score=72.84 Aligned_cols=101 Identities=18% Similarity=0.080 Sum_probs=71.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC---------------------------C-----------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT---------------------------G----------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~---------------------------~----------- 286 (500)
.+|+|||||..|+-+|..|++.+.+ |+|+++....... +
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 4899999999999999999987765 9999986511000 0
Q ss_pred -------------------------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCC
Q 010827 287 -------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNS 341 (500)
Q Consensus 287 -------------------------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (500)
...+...+.+.+++.|++++.+++|+++..+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v-------------------- 144 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERA-------------------- 144 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEE--------------------
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEE--------------------
Confidence 01123445666777899999999999998754211
Q ss_pred cceeEeecccccCCCc--cEEeecEEEEecCCCCC
Q 010827 342 DKYILELQPAIKGLES--QIFEADLVLWTVGSKPL 374 (500)
Q Consensus 342 ~~v~l~~~~~~~~~~~--~~l~~D~vi~a~G~~p~ 374 (500)
.++.+... ++ .++.+|.||.|+|....
T Consensus 145 ~gv~~~~~------dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 145 VGVRYRNT------EGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEECS------SSCEEEEEEEEEEECCCTTCS
T ss_pred EEEEEEeC------CCCEEEEEcCEEEECCCcchH
Confidence 13445421 33 58999999999998653
No 284
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.55 E-value=4.5e-05 Score=76.17 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=32.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
++|+||||||+||++|..|++. .+|++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCC
Confidence 4899999999999999999993 138999999998754
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.55 E-value=0.00017 Score=77.58 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=63.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccC-------------------------------CCCCCeEEEEcCCCCcccCcch
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQ-------------------------------DDKKPQVLLVDQSERFVFKPML 126 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~-------------------------------~~~g~~V~lie~~~~~~~~~~~ 126 (500)
..++|+|||||+.|+.+|..|++.+.. .....+|+++++.+..
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~------ 566 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASK------ 566 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSC------
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchh------
Confidence 357999999999999999999884210 0001234444443221
Q ss_pred hhhccccccCccccccHHHHhccCCcEEEEe-eEEEEecCCCCCCCCCceeecCcEEEcCCc--cEEEecEEEEeCCCCC
Q 010827 127 YELLSGEVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEP 203 (500)
Q Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~~d~lIlAtG~~p 203 (500)
+...+. ......+.+.+++.+|+++.+ .+.+++.+. . .+. .+| ..+.+|.||+|+|.+|
T Consensus 567 ---l~~~l~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-v------------~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 567 ---PGQGLG-KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG-L------------HVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp ---TTTTSC-TTTHHHHHHHHHHTTCEEECSCEEEEEETTE-E------------EEE-ETTEEEEECCSEEEECCCEEE
T ss_pred ---hccccc-cccHHHHHHHHHhcCCEEEeCcEEEEEeCCe-E------------EEe-cCCeEEEEeCCEEEECCCccc
Confidence 111111 112223456677889999987 788886431 1 232 355 5799999999999987
Q ss_pred C
Q 010827 204 K 204 (500)
Q Consensus 204 ~ 204 (500)
.
T Consensus 629 ~ 629 (671)
T 1ps9_A 629 N 629 (671)
T ss_dssp C
T ss_pred c
Confidence 5
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.55 E-value=7.8e-05 Score=76.42 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=51.2
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC--------CCC--CcchHHHHHHHHHhCCcEEEcCceE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PTG--TPGNREAALKVLSARKVQLVLGYFV 311 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~--------~~~--~~~~~~~~~~~l~~~gV~i~~~~~v 311 (500)
+++|+|||+|+.|+.+|..|++.+.. ..|+++++.+.+. +.+ ...+...+.+.+++.||+++.++.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~-~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 82 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSR-AHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEV 82 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSS-CEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCB
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCC-CCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEE
Confidence 57999999999999999999988721 2399999987654 222 1245566677788899999988655
No 287
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.55 E-value=3.6e-05 Score=78.67 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
.+||+|||||++||+||..|++ .|++|+|+|+++..+...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK------AGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCCCCce
Confidence 4799999999999999999999 689999999998766543
No 288
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.54 E-value=6.3e-05 Score=75.24 Aligned_cols=41 Identities=34% Similarity=0.398 Sum_probs=36.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
...+||+|||||++||++|..|++ .|++|+|+|+.+.++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS------SGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHH------CCCceEEEeccCCCCCc
Confidence 345899999999999999999999 68999999999876544
No 289
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.54 E-value=4.3e-05 Score=82.09 Aligned_cols=41 Identities=32% Similarity=0.427 Sum_probs=36.3
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (500)
....++|+|||||++||+||..|++ .|++|+|+|+.+..+.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGG 144 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHH------TTCEEEEECSSSSSBT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHH------CCCeEEEEecCCCCCC
Confidence 3456899999999999999999999 7999999999987554
No 290
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.53 E-value=6.3e-05 Score=77.42 Aligned_cols=39 Identities=33% Similarity=0.467 Sum_probs=34.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCC--CeEEEEcCCCCcccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKK--PQVLLVDQSERFVFK 123 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g--~~V~lie~~~~~~~~ 123 (500)
++||+|||||++||++|++|++ .| ++|+|+|+++..+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~------~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER------AFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH------HCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHH------hCCCCCEEEEECCCCCCce
Confidence 5799999999999999999999 46 999999998876543
No 291
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.53 E-value=0.0005 Score=68.82 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.2
Q ss_pred cEEEEECCChhHHHHHHHHHH-HH-hhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSE-RL-EEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~-~~-~~~~~vtlv~~~~ 280 (500)
.+|+|||+|.+|+.+|..|++ .+ .+ |+++++..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~---V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITN---VAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCC---EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCc---EEEEeCCC
Confidence 489999999999999999999 77 55 99998754
No 292
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.52 E-value=7.1e-05 Score=77.62 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=35.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
..++|+|||||++||+||..|++ .|++|+|+|+++.++...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI------HGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT------TSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEeCCCCCCce
Confidence 35899999999999999999998 689999999998866543
No 293
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.52 E-value=7.7e-05 Score=77.25 Aligned_cols=42 Identities=29% Similarity=0.370 Sum_probs=36.6
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
..+++|+|||||++||+||..|++ .|++|+|+|+++..+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~------~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAG------AGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHH------HTCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCce
Confidence 345899999999999999999999 689999999998766543
No 294
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.51 E-value=0.00049 Score=68.06 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=29.3
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCC
Confidence 3899999999999999999998766 99998754
No 295
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.51 E-value=0.00047 Score=68.50 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=28.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++.
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~---V~lle~~ 37 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEE---VTVIEKR 37 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 4899999999999999999998766 9999985
No 296
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.51 E-value=6.2e-05 Score=77.91 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=35.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCc
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~ 124 (500)
++|+|||||++||+||..|++ .|++|+|+|++++++...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV------AGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHH------CCCCEEEEeCCCCCCCcc
Confidence 799999999999999999999 689999999999876554
No 297
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.50 E-value=4.3e-05 Score=83.82 Aligned_cols=40 Identities=33% Similarity=0.438 Sum_probs=35.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (500)
...++|+|||||++||+||..|++ .|++|+|+|+.+.++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~------~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEecCcCCC
Confidence 456899999999999999999999 7999999999987544
No 298
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.50 E-value=0.00051 Score=72.52 Aligned_cols=101 Identities=20% Similarity=0.152 Sum_probs=71.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC---------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT--------------------------------------- 285 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~--------------------------------------- 285 (500)
.+|+|||||..|+-+|..|++.+.+ |+++++.......
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 5999999999999999999998766 9999986321000
Q ss_pred ------------------C-------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccC
Q 010827 286 ------------------G-------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKN 340 (500)
Q Consensus 286 ------------------~-------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (500)
. ...+...+.+.+++.|++++.++.|+++..+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g--------------------- 159 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDP--------------------- 159 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCST---------------------
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC---------------------
Confidence 0 012344556677789999999999999986431
Q ss_pred CcceeEeecccccCCCccEEeecEEEEecCCCC
Q 010827 341 SDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 341 ~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+.+.+.+. .+++..++.+|.||.|+|...
T Consensus 160 -~~~~V~~~---~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 160 -DRVVLTVR---RGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp -TCEEEEEE---ETTEEEEEEESEEEECCGGGC
T ss_pred -CEEEEEEe---cCCceEEEEcCEEEECCCCcc
Confidence 34444432 112236899999999999865
No 299
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.49 E-value=5.5e-05 Score=78.33 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=67.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC----------CCcchHHHHHHHHH--hCCcEEEcCceEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT----------GTPGNREAALKVLS--ARKVQLVLGYFVR 312 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~----------~~~~~~~~~~~~l~--~~gV~i~~~~~v~ 312 (500)
.+|+|||+|..|+.+|..|++. .+ |+++++.+.+... ++....+.+....+ +.+++++.++.+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~ 184 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSAL 184 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEEC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEE
Confidence 5899999999999999999887 44 9999987654211 11112222222222 5699999999988
Q ss_pred EEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCCCCC
Q 010827 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (500)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~ 376 (500)
++..++ ..+.+... ..++...+.+|.+|+|+|..|..+
T Consensus 185 ~i~~~~-----------------------~~~~~~~~---~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 185 GVFDKG-----------------------EYFLVPVV---RGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CCEECS-----------------------SSEEEEEE---ETTEEEEEEESCEEECCCEEECCC
T ss_pred EEEcCC-----------------------cEEEEEEe---cCCeEEEEECCEEEECCCCCccCC
Confidence 887644 33433311 111223789999999999987644
No 300
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.49 E-value=9.3e-05 Score=74.02 Aligned_cols=39 Identities=31% Similarity=0.464 Sum_probs=34.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
.++|+|||||++|+++|..|++ .|++|+|+|+++..+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE------KGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEEecCCcCCc
Confidence 3799999999999999999998 68999999999876543
No 301
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.48 E-value=0.00064 Score=67.62 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=29.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~---V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVK---TLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 4899999999999999999998766 99998754
No 302
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.48 E-value=0.00046 Score=72.84 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=67.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC-ccCC-----------------------C---------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET-TICP-----------------------T--------------- 285 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~-~~~~-----------------------~--------------- 285 (500)
-.|+|||||..|+++|..+++.+.+ |+++++.. .+.. .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CCEEEECChHHHHHHHHHHHhCCCC---EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 3899999999999999999998877 99999863 1110 0
Q ss_pred ----CC------------cchHHHHHHHHHh-CCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcce-eEe
Q 010827 286 ----GT------------PGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILE 347 (500)
Q Consensus 286 ----~~------------~~~~~~~~~~l~~-~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~l~ 347 (500)
.. ..+...+.+.+++ .|++++ +..|+++..++ +.+ .+.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~-----------------------g~V~GV~ 161 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVEN-----------------------DRVVGAV 161 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS-----------------------SBEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC-----------------------CEEEEEE
Confidence 00 0134455666777 699995 56888886543 333 233
Q ss_pred ecccccCCCccEEeecEEEEecCCCCC
Q 010827 348 LQPAIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 348 ~~~~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
+. ++.++.+|.||+|+|..+.
T Consensus 162 t~------dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 162 TQ------MGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp ET------TSEEEEEEEEEECCSTTTC
T ss_pred EC------CCCEEECCEEEEcCCCCcc
Confidence 21 5578999999999998654
No 303
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.48 E-value=0.00086 Score=69.39 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=73.0
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC--------------------------------------
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-------------------------------------- 285 (500)
..+|+|||+|++|+-+|..|++.+.+ |+++++.+.....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 46899999999999999999998776 9999875432110
Q ss_pred ---------CC-------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeec
Q 010827 286 ---------GT-------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (500)
Q Consensus 286 ---------~~-------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 349 (500)
.+ ..+.+.+.+.+++.|++++.++++++++.++ +++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~ 145 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG-----------------------DHVVVEVE 145 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS-----------------------SCEEEEEE
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEEE
Confidence 00 1133445566777899999999999998765 56666654
Q ss_pred ccccCCCccEEeecEEEEecCCCC
Q 010827 350 PAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 350 ~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+ ++..+++.+|+||.|.|...
T Consensus 146 ~---~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 146 G---PDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp C---SSCEEEEEEEEEEECCCTTC
T ss_pred c---CCCcEEEEeCEEEEccCccc
Confidence 2 11124789999999999764
No 304
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.47 E-value=0.00039 Score=73.21 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
-+|+|||+|..|+.+|..|++.+.+ |+|+++.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 4899999999999999999998876 999998653
No 305
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.46 E-value=0.00042 Score=72.42 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=73.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC----------------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---------------------------------------- 284 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~---------------------------------------- 284 (500)
.+|+|||+|.+|+-+|..|++.+.+ |+++++.+....
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 4899999999999999999998776 999998643210
Q ss_pred ---------------C-----------C--------CcchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCC
Q 010827 285 ---------------T-----------G--------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESG 330 (500)
Q Consensus 285 ---------------~-----------~--------~~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~ 330 (500)
. . ...+...+.+.+++.|++++.++++++++.+++..
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~--------- 153 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA--------- 153 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG---------
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc---------
Confidence 0 0 01233445666778899999999999998755100
Q ss_pred cccccccccCCcceeEeecccccCCCccEEeecEEEEecCCCC
Q 010827 331 AIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 331 ~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
..++++.+.+ +.+..++.+|+||.|.|...
T Consensus 154 ----------~~~v~v~~~~---~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 154 ----------GAGVTARLAG---PDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ----------CSEEEEEEEE---TTEEEEEEEEEEEECCCTTC
T ss_pred ----------cccEEEEEEc---CCCeEEEEeCEEEECCCCcc
Confidence 0166666541 11237889999999999864
No 306
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.46 E-value=0.00058 Score=73.56 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=29.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||||..|+-+|..|++.+.+ |+|+++..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQ---VTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 5899999999999999999998876 99999854
No 307
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.45 E-value=9.7e-05 Score=75.64 Aligned_cols=91 Identities=19% Similarity=0.149 Sum_probs=64.5
Q ss_pred ccEEEEECCChhHHHHHHHHHH-HHhh---cCeEEEEecCCccC--------CCC--CcchHHHHHHHHHhCCcEEEcCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSE-RLEE---KGIVQAINVETTIC--------PTG--TPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~-~~~~---~~~vtlv~~~~~~~--------~~~--~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
+++|+|||+|+.|+.+|..|++ .... ...|+++++.+.+. +.. ...+...+.+.+++.+|+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5799999999999999999988 6320 11299999986543 221 23566667777888899999875
Q ss_pred eEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCCC
Q 010827 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 372 (500)
Q Consensus 310 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~ 372 (500)
.+ . ..|.++ ++ ++.+|.||+|+|..
T Consensus 83 ~v----~-------------------------~~v~~~--------~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV----G-------------------------EHVQPG--------EL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB----T-------------------------TTBCHH--------HH-HHHSSEEEECCCCC
T ss_pred EE----C-------------------------CEEEEC--------CC-eEeCCEEEEeeCCC
Confidence 42 1 223332 22 36799999999997
No 308
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.45 E-value=0.00035 Score=73.51 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=72.1
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC-------------------------------------C----
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------------------------------------P---- 284 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~-------------------------------------~---- 284 (500)
.|+|||+|++|+-+|..|++.+.+ |+|+++.+... .
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 899999999999999999998776 99999754321 0
Q ss_pred -CC---------C-------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEe
Q 010827 285 -TG---------T-------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (500)
Q Consensus 285 -~~---------~-------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 347 (500)
.+ + ..+...+.+.+++.|++|+.+++|+.++.++ +++++.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-----------------------~~v~v~ 184 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA-----------------------EAVEVT 184 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS-----------------------SCEEEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-----------------------CeEEEE
Confidence 00 0 1234445666777899999999999998765 566665
Q ss_pred ecccccCCCc-cEEeecEEEEecCCC
Q 010827 348 LQPAIKGLES-QIFEADLVLWTVGSK 372 (500)
Q Consensus 348 ~~~~~~~~~~-~~l~~D~vi~a~G~~ 372 (500)
+.. .++ +++.+|+||.|.|..
T Consensus 185 ~~~----~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 185 VAG----PSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp EEE----TTEEEEEEESEEEECSCSS
T ss_pred EEe----CCCcEEEEeCEEEEcCCCC
Confidence 421 145 689999999999975
No 309
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.44 E-value=8.2e-05 Score=73.92 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=34.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
+||+|||||++|+++|..|++ .|++|+|+|+++..+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK------LNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG------GTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHh------CCCcEEEEecCCCCCcc
Confidence 589999999999999999998 68999999999875544
No 310
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.44 E-value=0.00048 Score=72.61 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=30.6
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
.+|+|||+|..|+.+|..|++.+.+ |+|+++.+.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 4799999999999999999998876 9999986543
No 311
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.41 E-value=0.00011 Score=75.84 Aligned_cols=42 Identities=26% Similarity=0.248 Sum_probs=35.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCCCcccCc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFKP 124 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~~ 124 (500)
...++|+|||||++||++|.+|++ .| ++|+|+|+++.++...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~------~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTE------LGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHH------TTCCSEEEEESSSSSSGGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHH------cCCCCEEEEeCCCCCCCee
Confidence 345899999999999999999999 56 7999999998765543
No 312
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.40 E-value=0.00041 Score=69.51 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=31.3
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
..+|+|||+|..|+.+|..|++.+.+ |+++++.+.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~ 61 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDR 61 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSST
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCc
Confidence 35899999999999999999988766 9999987643
No 313
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.39 E-value=0.00069 Score=70.94 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=68.3
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC--------CC-------------CC----------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PT-------------GT---------------- 287 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~--------~~-------------~~---------------- 287 (500)
.+|+|||+|.+|+.+|..|++.+.+ |+++++.+.+. +. +.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~ 93 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQ 93 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCH
Confidence 4899999999999999999987765 99999865431 10 01
Q ss_pred cchHHHHHHHHHhCC--cEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEE
Q 010827 288 PGNREAALKVLSARK--VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (500)
Q Consensus 288 ~~~~~~~~~~l~~~g--V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~v 365 (500)
+++.+++....++.+ +.++.+++|.+++.+++. +...+.+. +++++.+|.|
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------------------~~w~V~~~------~G~~~~ad~v 146 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEAT---------------------NTWTVDTN------HGDRIRARYL 146 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTT---------------------TEEEEEET------TCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCC---------------------CeEEEEEC------CCCEEEeCEE
Confidence 123334444455555 678899999998764310 34555542 5568999999
Q ss_pred EEecCCC
Q 010827 366 LWTVGSK 372 (500)
Q Consensus 366 i~a~G~~ 372 (500)
|+|+|..
T Consensus 147 V~AtG~~ 153 (542)
T 1w4x_A 147 IMASGQL 153 (542)
T ss_dssp EECCCSC
T ss_pred EECcCCC
Confidence 9999963
No 314
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.39 E-value=0.00013 Score=71.99 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=41.2
Q ss_pred CCCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCCCCCC
Q 010827 399 DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 455 (500)
Q Consensus 399 d~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~ 455 (500)
+.+|+++..+|+|++|+..+. .-...|..+|..|+.|+...+.++++.
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~---------~Gy~eAaa~Gl~AG~naa~~~~g~~p~ 367 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGV---------EGYLESAATGFLAGLNAARKALGLPPV 367 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTB---------CSHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ChhceecCCCCEEECcccccc---------HHHHHHHHhHHHHHHHHHHHhcCCCCC
Confidence 378999889999999999985 355689999999999999999987543
No 315
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.39 E-value=0.00091 Score=70.56 Aligned_cols=33 Identities=30% Similarity=0.315 Sum_probs=29.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
-.|+|||||..|+++|..+++.+.+ |+++++..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLH---CLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCc---EEEEEecc
Confidence 4899999999999999999998876 99999863
No 316
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.38 E-value=0.00097 Score=69.03 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=72.2
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCC--------------------------------------
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~-------------------------------------- 285 (500)
..+|+|||+|++|+-+|..|++.+.+ |+++++.+.+...
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 45899999999999999999998776 9999875432110
Q ss_pred -----CC-----------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeec
Q 010827 286 -----GT-----------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (500)
Q Consensus 286 -----~~-----------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 349 (500)
.. ..+.+.+.+.+++.|++++.+++|++++.++ +++++.+.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~ 144 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG-----------------------AGVTVEVR 144 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET-----------------------TEEEEEEE
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC-----------------------CeEEEEEE
Confidence 00 1123344566677899999999999998755 56666654
Q ss_pred ccccCCCccEEeecEEEEecCCCC
Q 010827 350 PAIKGLESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 350 ~~~~~~~~~~l~~D~vi~a~G~~p 373 (500)
+ ++..+++.+|+||.|.|...
T Consensus 145 ~---~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 145 G---PEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp E---TTEEEEEEESEEEECCCTTC
T ss_pred c---CCCCEEEEeCEEEECCCcch
Confidence 2 11124789999999999764
No 317
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.36 E-value=0.001 Score=66.57 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=30.7
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
||+|||+|++|+-+|..|++.+.+ |+|+++.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCCC
Confidence 899999999999999999998877 9999986654
No 318
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.36 E-value=0.00051 Score=70.16 Aligned_cols=103 Identities=16% Similarity=0.039 Sum_probs=70.6
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCC--C-C-----------------------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP--T-G----------------------------------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~--~-~----------------------------------- 286 (500)
.+|+|||||..|+.+|..|++.+.+ |+++++...... . .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 3799999999999999999887766 999998654210 0 0
Q ss_pred -------C--------cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCccee-Eeecc
Q 010827 287 -------T--------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQP 350 (500)
Q Consensus 287 -------~--------~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-l~~~~ 350 (500)
+ ..+.+.+.+.+.+.|++++.++.|+++..++ +.+. +.+..
T Consensus 84 ~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~v~gv~~~~ 140 (453)
T 3atr_A 84 MQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-----------------------GYVKGAVLFN 140 (453)
T ss_dssp SSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-----------------------TEEEEEEEEE
T ss_pred CceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-----------------------CEEEEEEEEE
Confidence 0 1134455666777899999999999987654 3332 32211
Q ss_pred cccCCCccEEeecEEEEecCCCCC
Q 010827 351 AIKGLESQIFEADLVLWTVGSKPL 374 (500)
Q Consensus 351 ~~~~~~~~~l~~D~vi~a~G~~p~ 374 (500)
. ..++..++.+|.||.|+|....
T Consensus 141 ~-~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 141 R-RTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp T-TTTEEEEEECSEEEECCGGGCT
T ss_pred c-CCCceEEEEcCEEEECcCCchh
Confidence 0 0112247899999999997654
No 319
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.35 E-value=9.3e-05 Score=72.85 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=30.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+||+|||||++|+++|++|++.+....++++|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 489999999999999999999320000138999999986
No 320
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.34 E-value=0.00018 Score=80.49 Aligned_cols=90 Identities=19% Similarity=0.194 Sum_probs=66.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe-
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (500)
.++|+|||+|+.|+.+|..|++ .|.+|+|+|+.+.+. . . .+.+++.+|+++.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~------~G~~Vtvv~~~~~~~----------~-----~-----~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAA------TGGVVAVIDARSSIS----------A-----A-----AAQAVADGVQVISGS 337 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGG------GTCCSEEEESCSSCC----------H-----H-----HHHHHHTTCCEEETE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH------cCCcEEEEECCCccc----------h-----h-----HHHHHhCCeEEEeCC
Confidence 3789999999999999999998 477899999987631 0 0 34556789999987
Q ss_pred eEEEEec--CCCCCCCCCceeecCcEEEcCC-------c--cEEEecEEEEeCCCCCCC
Q 010827 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLES-------G--LIVEYDWLVLSLGAEPKL 205 (500)
Q Consensus 158 ~v~~i~~--~~~~~~~~~~~~~~~~~v~~~~-------g--~~~~~d~lIlAtG~~p~~ 205 (500)
.+.++.. ..+. ..+.+.+ | ..+.+|.||+|+|.+|+.
T Consensus 338 ~v~~i~~~~~~~v-----------~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 338 VVVDTEADENGEL-----------SAIVVAELDEARELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EEEEEEECTTSCE-----------EEEEEEEECTTCCEEEEEEEECSEEEEECCEEECC
T ss_pred EeEEEeccCCCCE-----------EEEEEEeccccCCCCceEEEEcCEEEECCCcCcCh
Confidence 6888865 2221 0233222 3 579999999999987763
No 321
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.30 E-value=0.00014 Score=82.05 Aligned_cols=93 Identities=11% Similarity=0.134 Sum_probs=67.0
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC-------CC--CCcchHHHHHHHHHhCCcEEEcCceEEEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------PT--GTPGNREAALKVLSARKVQLVLGYFVRCI 314 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~-------~~--~~~~~~~~~~~~l~~~gV~i~~~~~v~~i 314 (500)
+++|+|||+|+.|+.+|..|++.+.. .|+++++.+.+. +. .+....+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 57999999999999999999998762 299999976543 12 2334455556778899999999876521
Q ss_pred ecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEEEecCC-CCC
Q 010827 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS-KPL 374 (500)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi~a~G~-~p~ 374 (500)
..+.++ +..++.+|.||+|||. +|.
T Consensus 264 ---------------------------~~v~~~--------~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ---------------------------NEITLN--------TLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ---------------------------TSBCHH--------HHHHTTCCEEEECCCCCEEC
T ss_pred ---------------------------ceEEhh--------hcCccCCCEEEEecCCCCCC
Confidence 122232 3345679999999998 465
No 322
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.30 E-value=0.00088 Score=70.49 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=29.2
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.|+|||||..|+++|..+++.+.+ |.++++..
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~ 60 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMGAK---TAMFVLNA 60 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEEecc
Confidence 899999999999999999998876 99999863
No 323
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.28 E-value=0.00059 Score=67.59 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=28.7
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.++|+|||+|.+|+-+|..|+ .+.+ |+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~---V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGR---VVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSC---EEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCC---EEEEECCC
Confidence 479999999999999999999 4655 99999864
No 324
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.27 E-value=0.00032 Score=76.15 Aligned_cols=96 Identities=22% Similarity=0.230 Sum_probs=65.9
Q ss_pred CCeEEEEC--CcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEE
Q 010827 79 KPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (500)
Q Consensus 79 ~~~VvIIG--gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (500)
.++|+||| ||+.|+.+|..|++ .|.+|+|+++.+ +..... ... . ...+.+.+++.+|+++.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~------~G~~Vtlv~~~~-l~~~~~--------~~~-~-~~~~~~~l~~~GV~i~~ 590 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLAT------AGHEVTIVSGVH-LANYMH--------FTL-E-YPNMMRRLHELHVEELG 590 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHH------TTCEEEEEESSC-TTHHHH--------HTT-C-HHHHHHHHHHTTCEEEC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH------cCCEEEEEeccc-cccccc--------ccc-c-HHHHHHHHHhCCCEEEc
Confidence 47999999 99999999999999 578999999986 321000 000 1 23355666778999998
Q ss_pred e-eEEEEecCCCCCCCCCceeecCcEEE--cCCc-------------------cEEEecEEEEeCCCCCC
Q 010827 157 D-RVKLLCPSDHLGVNGPMACTHGGTVL--LESG-------------------LIVEYDWLVLSLGAEPK 204 (500)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~--~~~g-------------------~~~~~d~lIlAtG~~p~ 204 (500)
+ .+.+++.+.. .+. ..++ ..+.+|.||+|+|..|.
T Consensus 591 ~~~v~~i~~~~v-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 591 DHFCSRIEPGRM-------------EIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp SEEEEEEETTEE-------------EEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred CcEEEEEECCeE-------------EEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 6 7888864321 111 1111 23899999999998875
No 325
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.26 E-value=9.8e-05 Score=75.34 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~ 119 (500)
..+||+|||||++|+++|++|++ +| ++|+|||++..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~------~G~~~V~vlE~~~~ 58 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKV------WSGGSVLVVDAGHA 58 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------HHCSCEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEccCCC
Confidence 45799999999999999999999 57 89999999433
No 326
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.25 E-value=0.00076 Score=67.79 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=28.9
Q ss_pred cEEEEECCChhHHHHHHHHHHH--HhhcCeEEEEecC
Q 010827 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVE 279 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~--~~~~~~vtlv~~~ 279 (500)
.+|+|||+|.+|+-+|..|++. +.+ |+|+++.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCC
Confidence 4899999999999999999998 766 9999874
No 327
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.23 E-value=0.0018 Score=64.66 Aligned_cols=33 Identities=36% Similarity=0.385 Sum_probs=29.4
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
-+|+|||+|.+|+-+|..|++.+.+ |+++++..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~---V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHR---VLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 3899999999999999999998876 99998754
No 328
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.21 E-value=0.001 Score=71.83 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=29.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||||..|+-+|..|++.+.+ |+|+++..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAV---VTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCC---EEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 5899999999999999999998876 99999854
No 329
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.21 E-value=0.00086 Score=70.67 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=29.6
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
.+|+|||+|..|+.+|..|++.+.+ |+++++.+.
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~ 160 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPI 160 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCC
Confidence 4899999999999999999987765 999987654
No 330
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.20 E-value=0.00027 Score=71.83 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=35.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
..++|+|||+|++|+++|..|++ .|++|+++|+++..+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSV------NGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCCCcccc
Confidence 34799999999999999999999 78999999999876554
No 331
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.19 E-value=0.0024 Score=67.32 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=69.7
Q ss_pred EEEEECCChhHHHHHHHHHHH------HhhcCeEEEEecCCccCCC----------------------------------
Q 010827 246 RVAVVGCGYSGVELAATVSER------LEEKGIVQAINVETTICPT---------------------------------- 285 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~------~~~~~~vtlv~~~~~~~~~---------------------------------- 285 (500)
+|+|||+|+.|+.+|..|++. +.+ |+|+++...+...
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 799999999999999999988 544 9999876432110
Q ss_pred -----------C---Cc--------------chHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCccccccc
Q 010827 286 -----------G---TP--------------GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (500)
Q Consensus 286 -----------~---~~--------------~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (500)
+ +. .+...+.+.+++.||+|+.++.++++..+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~------------------ 175 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED------------------ 175 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT------------------
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC------------------
Confidence 0 00 2334566677788999999999999976431
Q ss_pred ccCCccee-Eeeccc---ccCC------CccEEeecEEEEecCCCC
Q 010827 338 DKNSDKYI-LELQPA---IKGL------ESQIFEADLVLWTVGSKP 373 (500)
Q Consensus 338 ~~~~~~v~-l~~~~~---~~~~------~~~~l~~D~vi~a~G~~p 373 (500)
+.+. +.+.+. ..+. ++.++.+|.||.|.|...
T Consensus 176 ----g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 176 ----GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp ----SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred ----CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 2232 332210 0110 136899999999999864
No 332
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.11 E-value=0.0003 Score=74.18 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||+|||||++|+++|+.|++ +|++|+|+|+.+.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~------rG~~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA------SGIKTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCC
Confidence 3799999999999999999999 7999999999863
No 333
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.11 E-value=0.00031 Score=71.73 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=36.4
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
...+||+|||+|.+|+.+|..|++ .|++|+++|++++++..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~------~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSH------YGKKILVLDRNPYYGGE 58 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeccCCCCCC
Confidence 345899999999999999999999 79999999999876554
No 334
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.10 E-value=0.00042 Score=74.33 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.++|+||||||+||++|..|++... ...|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~-~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVR-QKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHH-HSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhcccc-ccCCCCEEEEeCCCC
Confidence 4799999999999999999998100 002789999999764
No 335
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.03 E-value=0.00046 Score=70.88 Aligned_cols=39 Identities=23% Similarity=0.522 Sum_probs=34.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCCcccC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFK 123 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~~ 123 (500)
.++|+|||||++||++|..|++ .|+ +|+|+|+++..+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~------~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSE------AGITDLLILEATDHIGGR 43 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHH------TTCCCEEEECSSSSSBTT
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCCceEEEeCCCCCCCc
Confidence 4799999999999999999999 688 89999999875543
No 336
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.02 E-value=0.00041 Score=74.16 Aligned_cols=56 Identities=14% Similarity=0.072 Sum_probs=41.2
Q ss_pred CCceEeCCCcccCCCCCEEEeccccc--ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHC
Q 010827 393 RGQAETDETLCVKGHPRIFALGDSSA--LRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (500)
Q Consensus 393 ~g~i~vd~~~~t~~~~~vyaiGD~~~--~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 450 (500)
-|.|.||...|+ ..|++||+|+|+. .+..+ +.-......++-.|+.|++++...+.
T Consensus 372 ~GGi~vd~~~~v-~IpGLYAaGE~a~~g~hGan-rlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 372 MGGIRTDYRGEA-KLKGLFSAGEAACWDMHGFN-RLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECCSSTTC-CCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEECCCCce-ecCCEEeccccccccccCCC-CCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 488999999999 9999999999864 22111 11134456788889999999887764
No 337
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.00 E-value=0.0031 Score=63.32 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=29.0
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
.+|+|||+|..|+.+|..|++.+.+. |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~--v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGK--VTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCe--EEEEECCCC
Confidence 48999999999999999998865421 889988654
No 338
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.00 E-value=0.0038 Score=63.18 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=29.1
Q ss_pred cEEEEECCChhHHHHHHHHHHHHh-hcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLE-EKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~-~~~~vtlv~~~~ 280 (500)
.+|+|||+|..|+-+|..|++.+. + |+|+++..
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~---V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTN---VTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCc---EEEEeCCC
Confidence 489999999999999999999887 5 99988754
No 339
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.99 E-value=0.00043 Score=75.30 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=35.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCccc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (500)
...++|+|||||++|+++|..|++ .|++|+|+|+.+..+.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHN------FGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEecccceec
Confidence 345899999999999999999999 6899999999887554
No 340
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.99 E-value=0.0037 Score=64.83 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=29.3
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
.|+|||+|..|+-+|..|++.+.+ |+|+++.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~---V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGAD---VLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 799999999999999999998776 999987553
No 341
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.91 E-value=0.00047 Score=73.68 Aligned_cols=45 Identities=7% Similarity=-0.043 Sum_probs=34.3
Q ss_pred CCcccCCCCCEEEecccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHCC
Q 010827 400 ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (500)
Q Consensus 400 ~~~~t~~~~~vyaiGD~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 451 (500)
...+| +.|++||+|||+... +......+..+|+.++.++...+..
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~------~hg~~~~sl~~g~~ag~~a~~~~~~ 490 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS------GHKFSSGSHAEGRIVGKQMVRWYLD 490 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ccCCeEeCccccccc------cCccHhHHHHHHHHHHHHHHHHHhh
Confidence 45677 999999999998531 1223677888899999998887754
No 342
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.89 E-value=0.0045 Score=64.95 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=28.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
-.|+|||||.+|+-+|..|++++.+ |+++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~~G~~---V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQVRGIQ---TGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCc---EEEEECC
Confidence 4899999999999999999998876 8888875
No 343
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.87 E-value=0.0044 Score=64.07 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=29.1
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||||.+|+.+|..|++++.+ |+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC---EEEEECCC
Confidence 3799999999999999999998776 99998753
No 344
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.87 E-value=0.00066 Score=72.53 Aligned_cols=35 Identities=34% Similarity=0.541 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhh---hcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLE---SLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~---~~~~~~~~g~~V~lie~~~ 118 (500)
.+||||||||+|||+||..|+ +. .|.+|+|+||.+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~-----~G~~V~vlEK~~ 59 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKL-----GGLKVTLVEKAA 59 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTT-----TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhh-----CCCeEEEEeCcC
Confidence 479999999999999999998 31 488999999976
No 345
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.87 E-value=0.0017 Score=66.25 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|+|+|+|-.|...|..|.+ .||+|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~------~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG------ENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS------TTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 3689999999999999999987 799999999986
No 346
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.82 E-value=0.00076 Score=70.67 Aligned_cols=37 Identities=30% Similarity=0.438 Sum_probs=33.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|++|||+|++|+.+|.+|++ .|++|+|+|+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~------~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE------AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCCC
Confidence 345899999999999999999999 6899999999864
No 347
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.77 E-value=0.00057 Score=73.11 Aligned_cols=42 Identities=29% Similarity=0.453 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhccc--CCCCCCeEEEEcCCC-Cc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVW--QDDKKPQVLLVDQSE-RF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~--~~~~g~~V~lie~~~-~~ 120 (500)
+++|+|||||++||+||..|++.+. ....+++|+|+|+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999998420 000118999999998 76
No 348
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.68 E-value=0.01 Score=62.07 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=29.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
.+|+|||+|++|+-+|..|++.+.+ |+++++.+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~~ 60 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVG---HLVVEQTDG 60 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 4799999999999999999998776 999987654
No 349
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.63 E-value=0.0013 Score=66.98 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=57.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
..++|.|||.|.+|+++|..|.+ +|++|+++|.++. . ..+..+.++..++.+..+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~------~G~~V~~~D~~~~----------~---------~~~~~~~L~~~gi~~~~g 62 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK------LGAIVTVNDGKPF----------D---------ENPTAQSLLEEGIKVVCG 62 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH------TTCEEEEEESSCG----------G---------GCHHHHHHHHTTCEEEES
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh------CCCEEEEEeCCcc----------c---------CChHHHHHHhCCCEEEEC
Confidence 45899999999999999999998 7999999999752 0 112334556678887765
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i 208 (500)
.- +.. + . ++ .+|.||+++|..+..|.+
T Consensus 63 ~~----~~~---------------~-~-~~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 63 SH----PLE---------------L-L-DE---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp CC----CGG---------------G-G-GS---CEEEEEECTTSCTTSHHH
T ss_pred CC----hHH---------------h-h-cC---CCCEEEECCcCCCCChhH
Confidence 31 000 0 0 00 289999999987765543
No 350
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.58 E-value=0.0013 Score=68.47 Aligned_cols=36 Identities=36% Similarity=0.532 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+|+||||||+||+.+|.+|++- .+++|+|+|+++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~-----~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSED-----PDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhC-----CCCeEEEEcCCCC
Confidence 59999999999999999999872 6899999999864
No 351
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.57 E-value=0.012 Score=61.41 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=28.9
Q ss_pred ccEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCC
Q 010827 244 LIRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVET 280 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~ 280 (500)
..+|+|||||..|+-+|..|++ .+.+ |+|+++..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCCC
Confidence 3589999999999999999998 5554 99999743
No 352
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.53 E-value=0.01 Score=65.31 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=29.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHHh-hcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLE-EKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~-~~~~vtlv~~~~ 280 (500)
.+|+|||+|.+|+.+|..|++.+. + |+++++..
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~---V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNN---ITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc---EEEEeCCC
Confidence 489999999999999999999876 5 99999865
No 353
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.51 E-value=0.0022 Score=63.78 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=30.0
Q ss_pred EEEEECCChhHHHHHHHHHHH--HhhcCeEEEEecCCcc
Q 010827 246 RVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTI 282 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~--~~~~~~vtlv~~~~~~ 282 (500)
+|+|||||+.|+.+|..|++. +.+ |+++++.+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWA---IDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECCCCC
Confidence 799999999999999999998 766 9999986543
No 354
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.46 E-value=0.0087 Score=63.84 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=28.6
Q ss_pred cEEEEECCChhHHHHHHHHHH-HHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSE-RLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~-~~~~~~~vtlv~~~~ 280 (500)
.+|+|||+|++|+-+|..|++ .+.+ |+++++.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 389999999999999999998 7766 88888754
No 355
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.45 E-value=0.038 Score=56.94 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=85.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhc-----------CeEEEEecCCccC-------CCC--------------------
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEK-----------GIVQAINVETTIC-------PTG-------------------- 286 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~-----------~~vtlv~~~~~~~-------~~~-------------------- 286 (500)
..|+|||+|++|+-+|..|.+.+... ....++++.+.+. +..
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 47999999999999999998765321 1155666654321 110
Q ss_pred ----------------------C--cchHHHHHHHHHhCCcEEEcCceEEEEecCccccccccCCCCCcccccccccCCc
Q 010827 287 ----------------------T--PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD 342 (500)
Q Consensus 287 ----------------------~--~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (500)
+ .++.+++....++.+..+..+++|++++...... .....+
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~---------------~~~~~~ 184 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDP---------------SSSVVD 184 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSST---------------TSSCBC
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccc---------------cccccc
Confidence 0 1234444555566677789999999997533110 000002
Q ss_pred ceeEeecccccCCCccEEeecEEEEecCCCCCCCCCCCCCCccCCCCCCCCCceEeCCCccc---------CCCCCEEEe
Q 010827 343 KYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCV---------KGHPRIFAL 413 (500)
Q Consensus 343 ~v~l~~~~~~~~~~~~~l~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~~~~g~i~vd~~~~t---------~~~~~vyai 413 (500)
..+++..+... ++.+++.++.||+|+|..|..+-.. ...|.+.....+.. ...++|-+|
T Consensus 185 ~~~V~~~~~~~-g~~~~~~ar~vVlatG~~P~iP~~~-----------~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VV 252 (501)
T 4b63_A 185 FFTVRSRNVET-GEISARRTRKVVIAIGGTAKMPSGL-----------PQDPRIIHSSKYCTTLPALLKDKSKPYNIAVL 252 (501)
T ss_dssp EEEEEEEETTT-CCEEEEEEEEEEECCCCEECCCTTS-----------CCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEE
T ss_pred eEEEEEecCCC-ceEEEEEeCEEEECcCCCCCCCCCC-----------CCCcceeeccccccchhhccccccCCcEEEEE
Confidence 34454432222 2556789999999999887754321 12355554433321 134568888
Q ss_pred ccccc
Q 010827 414 GDSSA 418 (500)
Q Consensus 414 GD~~~ 418 (500)
|-..+
T Consensus 253 G~G~S 257 (501)
T 4b63_A 253 GSGQS 257 (501)
T ss_dssp CCSHH
T ss_pred CCcHH
Confidence 85554
No 356
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.44 E-value=0.0082 Score=61.52 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=27.6
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
.|+|||+|..|+-+|..|++.+.+ |+++++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~---V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKK---VTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 389999999999999999987765 9999876
No 357
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.39 E-value=0.017 Score=58.65 Aligned_cols=35 Identities=17% Similarity=0.387 Sum_probs=31.2
Q ss_pred cEEEEECCChhHHHHHHHHHHHH------hhcCeEEEEecCCcc
Q 010827 245 IRVAVVGCGYSGVELAATVSERL------EEKGIVQAINVETTI 282 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~------~~~~~vtlv~~~~~~ 282 (500)
++|+|||+|.+|+-+|..|++.+ .+ |+|+++.+.+
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~---V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLE---LTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEE---EEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCC---EEEEECCCCC
Confidence 68999999999999999999998 55 9999987554
No 358
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.39 E-value=0.0022 Score=67.43 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..+|+||||||.||+.+|.+|++. .+++|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~-----~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN-----PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS-----TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-----CCCcEEEEecCCC
Confidence 348999999999999999999982 3489999999875
No 359
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.36 E-value=0.0022 Score=67.43 Aligned_cols=36 Identities=33% Similarity=0.551 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+|+||||||.||+.+|.+|++ +++++|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse-----~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTE-----NPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT-----STTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHh-----CCCCcEEEEecCC
Confidence 35899999999999999999987 2689999999987
No 360
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.20 E-value=0.027 Score=58.82 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=28.8
Q ss_pred ccEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCC
Q 010827 244 LIRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVET 280 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~ 280 (500)
..+|+|||||..|.-+|..|++ .+.+ |+|+++..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTAD---ITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSE---EEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCc---EEEEeCCC
Confidence 3689999999999999999998 4444 99999854
No 361
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.14 E-value=0.021 Score=59.91 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=29.1
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
..|+|||||.+|+-+|..|++++.+ |+++++.+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~---V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIK---TGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 4899999999999999999998876 99998643
No 362
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.09 E-value=0.0083 Score=54.58 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~ 117 (500)
...++|+|||||..|...+..|.+ .|.+|+|++++
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~------~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQ------EGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGG------GCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH------CCCEEEEECCC
Confidence 346899999999999999999998 68999999875
No 363
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.05 E-value=0.011 Score=60.99 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=29.0
Q ss_pred cEEEEECCChhHHHHHHHHHHH-HhhcCeEEEEecCCcc
Q 010827 245 IRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTI 282 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~-~~~~~~vtlv~~~~~~ 282 (500)
-.|+|||+|.+|+-+|..|++. +.+ |+|++..+.+
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~---V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPS---WMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSC---EEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCC---EEEEECCCCC
Confidence 4799999999999999999876 555 8888875543
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.03 E-value=0.011 Score=57.38 Aligned_cols=79 Identities=22% Similarity=0.162 Sum_probs=53.9
Q ss_pred CCeEEEECCcHHHHH-HHHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 79 KPRICILGGGFGGLY-TALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~-aA~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
+++|.|||.|.+||+ +|..|.+ +|++|++.|+++. .+..+.+++.++.+..+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~------~G~~V~~~D~~~~---------------------~~~~~~L~~~gi~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKE------AGFEVSGCDAKMY---------------------PPMSTQLEALGIDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHH------TTCEEEEEESSCC---------------------TTHHHHHHHTTCEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHh------CCCEEEEEcCCCC---------------------cHHHHHHHhCCCEEECC
Confidence 478999999999997 7778877 7999999998753 01233455568877654
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i 208 (500)
. ++. ... ...+|.||++.|..+..|.+
T Consensus 57 ~----~~~-----------------~l~---~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 57 F----DAA-----------------QLD---EFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp C----CGG-----------------GGG---SCCCSEEEECTTCCTTCHHH
T ss_pred C----CHH-----------------HcC---CCCCCEEEECCCcCCCCHHH
Confidence 2 000 000 02489999999987665543
No 365
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.02 E-value=0.0047 Score=63.94 Aligned_cols=38 Identities=24% Similarity=0.480 Sum_probs=33.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
...+|++|||+|++|+.+|..|++ +|.+|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ------AGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCC
Confidence 345899999999999999999999 68999999998753
No 366
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.00 E-value=0.018 Score=60.89 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=28.3
Q ss_pred EEEEECCChhHHHHHHHHHHHH--hhcCeEEEEecCC
Q 010827 246 RVAVVGCGYSGVELAATVSERL--EEKGIVQAINVET 280 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~--~~~~~vtlv~~~~ 280 (500)
.|+|||+|..|+-+|..|++.+ .+ |+++++..
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAK---IALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCCC
Confidence 7999999999999999999987 55 99998753
No 367
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.98 E-value=0.0041 Score=64.35 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=33.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~ 121 (500)
.+|++|||+|++|+.+|..|++ .|.+|+|+|+.....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGE------AGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCC
Confidence 4799999999999999999999 689999999987543
No 368
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=95.97 E-value=0.037 Score=55.97 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=28.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHH-hhcCeEEEEec
Q 010827 245 IRVAVVGCGYSGVELAATVSERL-EEKGIVQAINV 278 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~-~~~~~vtlv~~ 278 (500)
.+|+|||+|.+|+.+|..|++.+ .+ |+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~---V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGS---VLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSC---EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc---EEEEcc
Confidence 48999999999999999999998 65 999998
No 369
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.96 E-value=0.03 Score=59.94 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=28.2
Q ss_pred cEEEEECCChhHHHHHHHHHH-----HHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSE-----RLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~-----~~~~~~~vtlv~~~~ 280 (500)
-+|+|||+|++|+-+|..|++ .+.+ |+++++.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCCC
Confidence 379999999999999999998 6655 88888754
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.89 E-value=0.011 Score=49.66 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=33.0
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
...+.+|+|||+|..|...|..|.+ .|++|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~------~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA------SDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 3456789999999999999999998 689999999974
No 371
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.88 E-value=0.0039 Score=65.04 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..+|+||||||+||+.+|.+|++ |.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-------g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-------TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-------CCcEEEEecCCC
Confidence 34899999999999999999986 569999999875
No 372
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.87 E-value=0.0035 Score=65.72 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=32.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
.+|+||||||.||+.+|.+|++ +++++|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse-----~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTE-----DPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTT-----STTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHh-----CcCCcEEEEecCCcc
Confidence 3799999999999999999988 278999999998754
No 373
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.56 E-value=0.0082 Score=62.71 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
..+|++|||+|++|+.+|.+|++. +|.+|+|+|+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-----~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-----PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-----CCCCEEEEecCCcC
Confidence 358999999999999999999982 48999999998653
No 374
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.55 E-value=0.073 Score=57.80 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=31.2
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
..+|+|||+|.+|+.+|..|++.+.+ |+++++.+.+
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 371 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIK---VTVLEAKDRI 371 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEecccce
Confidence 36999999999999999999998876 9999975543
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.51 E-value=0.013 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|+|+|+|..|...|..|.+ .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~------~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA------AGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCeEEEEECCH
Confidence 4689999999999999999998 689999999864
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.44 E-value=0.017 Score=49.23 Aligned_cols=36 Identities=33% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|+|||+|..|..+|..|.+ .|++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~------~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS------SGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 45789999999999999999988 6889999998753
No 377
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.33 E-value=0.1 Score=54.84 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=28.7
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
-.|+|||+|..|+-+|..+++.+.+ |+++++..
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~---V~vlEK~~ 40 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQT---CALLSKVF 40 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEecCC
Confidence 3799999999999999999988766 99998753
No 378
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.33 E-value=0.019 Score=48.76 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+.+|+|+|+|..|...|..|.+ .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~------~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ------RGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH------TTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCCEEEEECCC
Confidence 4789999999999999999988 689999999963
No 379
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.28 E-value=0.011 Score=62.26 Aligned_cols=38 Identities=32% Similarity=0.388 Sum_probs=33.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCc
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (500)
..+|++|||+|++|+.+|.+|++. +|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-----~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-----PKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-----TTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-----CCCcEEEEecCCcc
Confidence 458999999999999999999882 68999999998754
No 380
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.03 E-value=0.024 Score=45.38 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~ 118 (500)
+++|+|+|+|..|..++..|.+ .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~------~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT------SSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------CSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCH
Confidence 4689999999999999999998 57 8999999864
No 381
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.99 E-value=0.027 Score=46.65 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=30.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|+|||+|..|...|..|.+ .|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~------~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE------KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 589999999999999999998 689999999864
No 382
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.77 E-value=0.03 Score=50.84 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=38.5
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVL 307 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~ 307 (500)
+++|+|||||.+|...+..|.+.+.+ |+++.+.. ...+.+..++.+++++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~~----------~~~l~~l~~~~~i~~i~ 81 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPTV----------SAEINEWEAKGQLRVKR 81 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSSC----------CHHHHHHHHTTSCEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCCC----------CHHHHHHHHcCCcEEEE
Confidence 68999999999999999999988877 99997631 22344555556677653
No 383
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.73 E-value=0.12 Score=54.62 Aligned_cols=32 Identities=25% Similarity=0.219 Sum_probs=28.4
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.|+|||+|..|+-+|..+++.+.+ |.++++..
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFN---TACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCc---EEEEeccC
Confidence 799999999999999999988766 99988753
No 384
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.58 E-value=0.047 Score=52.70 Aligned_cols=67 Identities=18% Similarity=0.071 Sum_probs=47.4
Q ss_pred ccEEEEECCChhHHHHHHHHHHH--HhhcCeEEEEecCCccCCCC--------CcchHHHHHHHHHhCCcEEEcCceEEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPTG--------TPGNREAALKVLSARKVQLVLGYFVRC 313 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~--~~~~~~vtlv~~~~~~~~~~--------~~~~~~~~~~~l~~~gV~i~~~~~v~~ 313 (500)
...|+|||+|+.|+.+|..|++. +.+ |+++++.+.+.-.. ...+...+...+++.|+++..+.....
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~ 141 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVV 141 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCccee
Confidence 46899999999999999999865 445 99999876543221 122333445667788998887655443
No 385
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.49 E-value=0.031 Score=46.47 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|+|+|+|..|...|..|.+ .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~------~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR------MGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 4689999999999999999998 688999999864
No 386
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.44 E-value=0.026 Score=51.99 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=31.1
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
.|+|||+|++|+-+|..|++.+.+ |+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCC
Confidence 699999999999999999998887 9999987654
No 387
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.26 E-value=0.028 Score=56.95 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.++|+|||.|.+||++|..|.+ +|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~------~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLA------RGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHT------TTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHh------CCCEEEEEECCCC
Confidence 4789999999999999999988 7999999999764
No 388
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.23 E-value=0.047 Score=55.46 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=43.4
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~~ 309 (500)
+|+|.|||.|.+|+.+|..|.+.|.+ |++.+..... .....+.|++.||++..+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~~--------~~~~~~~L~~~gi~~~~g~ 63 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPFD--------ENPTAQSLLEEGIKVVCGS 63 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCGG--------GCHHHHHHHHTTCEEEESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCccc--------CChHHHHHHhCCCEEEECC
Confidence 68999999999999999999998877 9999875421 1123457888899988764
No 389
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.23 E-value=0.061 Score=54.67 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|+|||+|..|...+..|.+ .|++|++++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~------~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLE------AGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH------TTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CcCEEEEEcCCC
Confidence 35899999999999999999999 689999999863
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.86 E-value=0.053 Score=47.49 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCC-CCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDK-KPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~-g~~V~lie~~~ 118 (500)
...+|+|||+|..|..+|..|.+ . |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~------~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA------RYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH------HHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------ccCCeEEEEECCH
Confidence 35689999999999999999988 6 88999999874
No 391
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.82 E-value=0.14 Score=52.34 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=45.4
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCC------------------cchHHHHHHHHHhCCcEE
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGT------------------PGNREAALKVLSARKVQL 305 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~------------------~~~~~~~~~~l~~~gV~i 305 (500)
.++|+|||+|.+|+.+|..|++.+.+ |+++++.+.+..... ......+.+.+++.|+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 57999999999999999999998876 999998776544321 011356678888888765
No 392
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.68 E-value=0.049 Score=52.76 Aligned_cols=52 Identities=21% Similarity=0.188 Sum_probs=41.2
Q ss_pred ccEEEEECCChhHHH-HHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcC
Q 010827 244 LIRVAVVGCGYSGVE-LAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e-~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
.|+|.|||.|.+|+. +|..|.++|.+ |++.+..... . ..+.|++.||+++.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~~------~----~~~~L~~~gi~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMYP------P----MSTQLEALGIDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCCT------T----HHHHHHHTTCEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCCc------H----HHHHHHhCCCEEECC
Confidence 579999999999997 88888888887 9999875431 1 235678889998765
No 393
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.63 E-value=0.03 Score=57.57 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=29.9
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
|+|+|||+|..|+-+|..|++.|.+ |+|+++.+.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~---V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIP---VLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCC---EEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc---EEEEccCCCC
Confidence 6999999999999999999998877 9999986543
No 394
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.52 E-value=0.072 Score=56.19 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=35.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCCcccC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (500)
+.+||+|||+|..|...|..|++ .|.+|++||++++++..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~------~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSR------SGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCCcccCc
Confidence 35999999999999999999999 68899999999986543
No 395
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.36 E-value=0.26 Score=52.33 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=27.1
Q ss_pred EEEEECCChhHHHHHHHHH---H-HHhhcCeEEEEecCC
Q 010827 246 RVAVVGCGYSGVELAATVS---E-RLEEKGIVQAINVET 280 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~---~-~~~~~~~vtlv~~~~ 280 (500)
.|+|||+|..|+-+|..++ + .+.+ |.++++..
T Consensus 24 DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~~ 59 (643)
T 1jnr_A 24 DILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKAA 59 (643)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCcC
Confidence 7999999999999999998 3 4554 99998754
No 396
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.22 E-value=0.05 Score=51.00 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|+|||||..|...+..|.+ .|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~------~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP------TGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG------GTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCC
Confidence 45899999999999999999998 689999999864
No 397
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.22 E-value=0.091 Score=52.02 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|+|||+|.+|+.+|..|.. .|.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~------lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARR------LGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 45799999999999999999988 5889999999864
No 398
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.19 E-value=0.094 Score=52.67 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=34.2
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 74 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+...++.+|.|||.|+.||..|..+++ .|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~------~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFAL------LGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 344567899999999999999999998 689999999875
No 399
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.83 E-value=0.078 Score=50.93 Aligned_cols=36 Identities=28% Similarity=0.280 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|.|||+|.-|-..|..++. .|++|+|+|.++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~------~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 34789999999999999999998 7999999999763
No 400
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.82 E-value=0.12 Score=48.77 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~------~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF------HGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCHH
Confidence 4789999999999999999998 6999999999753
No 401
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.79 E-value=0.11 Score=49.70 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=33.2
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+++|.|||.|.-|...|..|++ .|++|+++|+++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLK------NGFKVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 3445799999999999999999999 6899999999753
No 402
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.75 E-value=0.087 Score=47.56 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=29.8
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 81 ~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+|+|||+|..|...|..|.+ .|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~------~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS------RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 69999999999999999998 689999999874
No 403
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.66 E-value=0.14 Score=52.48 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=30.0
Q ss_pred CCCeEEEECCcHHHHH-HHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLY-TALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~-aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||.|-+|++ +|..|.+ .|++|++.|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~------~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLAN------EGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHH------TTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHh------CCCeEEEEECCC
Confidence 3589999999999997 6888888 799999999763
No 404
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.62 E-value=0.085 Score=50.81 Aligned_cols=36 Identities=28% Similarity=0.280 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|.|||+|.-|.+.|..|++ .|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~------~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 34789999999999999999998 7999999999863
No 405
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.39 E-value=0.1 Score=51.23 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
...+|+|||+|..|+.+|..|..+ |.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL------GAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 457999999999999999999984 78999999975
No 406
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.29 E-value=0.13 Score=49.41 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.4
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|.|||+|.-|...|..|++ .|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK------TGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH------TTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCh
Confidence 689999999999999999998 689999999864
No 407
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.15 E-value=0.14 Score=46.55 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=31.2
Q ss_pred CCCCCeEEEECC-cHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 76 DKKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 76 ~~~~~~VvIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+.++|+|.|| |..|...+..|.+ +|++|+++++++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~------~G~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKN------KGHEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHh------CCCeEEEEECCh
Confidence 345689999998 9999999999998 799999999874
No 408
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.08 E-value=0.17 Score=48.13 Aligned_cols=34 Identities=32% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~------~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA------TGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 4689999999999999999998 689999999975
No 409
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.01 E-value=0.1 Score=43.60 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|+|||+|..|...|..|.+ .|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~------~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY------PQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEcCCH
Confidence 4799999999999999999987 688999999874
No 410
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.76 E-value=0.17 Score=48.63 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (500)
+.+|+|||+|..|...|..|++ .|+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~------~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ------RGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 3689999999999999999988 678 999999874
No 411
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.69 E-value=0.11 Score=53.80 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=29.5
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHh---------hcCeEEEEecCCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLE---------EKGIVQAINVETT 281 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~---------~~~~vtlv~~~~~ 281 (500)
.++|+|||||..|.-+|..|++... ..-.|+|+++...
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 3689999999999999999998431 1123999998653
No 412
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.47 E-value=0.18 Score=48.03 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=30.3
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+|.|||+|..|...|..|.+ .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ------GGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 589999999999999999998 689999999864
No 413
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.38 E-value=0.19 Score=50.06 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|+|||+|.+|+.+|..|+. .|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANS------LGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 35799999999999999999988 4789999998753
No 414
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.34 E-value=0.2 Score=49.02 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
+++|+|||||..|..++..+++ .|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~------~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKK------AGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCCC
Confidence 4899999999999999999988 6899999998764
No 415
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.28 E-value=0.23 Score=44.51 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++|.|||+|..|.+.|..|.+ .|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~------~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEI------AGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH------TTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 34689999999999999999998 6899999998754
No 416
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.22 E-value=0.22 Score=49.30 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|+|||+|.+|+.++..++. .|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR------LGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 45899999999999999999988 5789999998753
No 417
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.12 E-value=0.23 Score=45.70 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=32.0
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 76 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
....++|.|||+|.-|.+.|..|.+ .|++|+++++++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~------~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALAD------LGHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHH------CCCEEEEEeCChh
Confidence 3456899999999999999999998 6899999998753
No 418
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.11 E-value=0.21 Score=50.61 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|.|||+|..|+..|..|++ .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~------~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE------LGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHh------cCCEEEEEECCH
Confidence 589999999999999999999 689999999975
No 419
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.00 E-value=0.16 Score=48.74 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=29.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|.|||+|.-|...|..|++ .|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR------SGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH------TSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCc
Confidence 689999999999999999998 689999999863
No 420
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.93 E-value=0.17 Score=50.62 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=30.8
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
+|+|||+|.+|+-+|..|++.+.+ |+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHE---IIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCC
Confidence 799999999999999999998766 9999997665
No 421
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.86 E-value=0.25 Score=47.77 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
+.+|+|||+|..|...|..|++ .|+ +|+|+|.++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~------~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL------RELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECChh
Confidence 3689999999999999999998 577 8999999753
No 422
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.85 E-value=0.2 Score=49.15 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=31.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (500)
-...+|||+|||.||+.+|..|... |. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 3457999999999999999999984 66 999999974
No 423
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.76 E-value=0.22 Score=50.58 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCC-CC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDK-KP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~-g~-~V~lie~~~~ 119 (500)
.++|.|||+|.-|+..|..|++ . |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~------~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD------APCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH------STTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHH------hCCCCeEEEEECChh
Confidence 3689999999999999999999 6 99 9999999864
No 424
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.73 E-value=0.25 Score=46.46 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=30.2
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 81 ~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
+|.|||+|..|...|..|.+ .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK------QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHh------CCCCEEEEEcCcc
Confidence 69999999999999999998 6899999998753
No 425
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.66 E-value=0.13 Score=52.94 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=28.0
Q ss_pred cEEEEECCChhHHHHHHHHHH---HHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~---~~~~~~~vtlv~~~~ 280 (500)
.+|+|||||..|.-+|..|++ .+.+ |+|+++..
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~---V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRID---VTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSE---EEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCE---EEEEecCC
Confidence 489999999999999999998 5555 99999865
No 426
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.65 E-value=0.24 Score=50.56 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+|.|||+|..|+..|..|++ .|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~------~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD------IGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 4789999999999999999999 699999999875
No 427
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.63 E-value=0.23 Score=48.10 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~ 117 (500)
.++|.|||+|.-|...|..|++ .|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~------~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL------AGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH------TTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHH------CCCEEEEEECh
Confidence 3689999999999999999998 68999999985
No 428
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.58 E-value=0.17 Score=51.90 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=40.3
Q ss_pred ccEEEEECCChhHHH-HHHHHHHHHhhcCeEEEEecCCccCCCCCcchHHHHHHHHHhCCcEEEcC
Q 010827 244 LIRVAVVGCGYSGVE-LAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e-~A~~l~~~~~~~~~vtlv~~~~~~~~~~~~~~~~~~~~~l~~~gV~i~~~ 308 (500)
.|+|.|||-|-+|+. +|..|.+.|.+ |+..+.... ...+.|++.||++..+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~~-----------~~~~~l~~~gi~~~~g 73 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPN-----------SVTQHLTALGAQIYFH 73 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCC-----------HHHHHHHHTTCEEESS
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCCC-----------HHHHHHHHCCCEEECC
Confidence 589999999999996 79999888877 888875432 1235688889998876
No 429
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.55 E-value=0.27 Score=48.19 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|+|+|+|.+|+.++..|+. .|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~------~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVG------LGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 4799999999999999999988 578999999874
No 430
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.54 E-value=0.29 Score=47.30 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
+.+|+|||+|..|...|..|+. .|+ +|+++|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~------~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ------KDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCHH
Confidence 3689999999999999999998 577 9999999754
No 431
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.49 E-value=0.25 Score=47.41 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
+.+|.|||+|..|...|..|++ .|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~------~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK------DNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCch
Confidence 3689999999999999999998 577 9999999753
No 432
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.43 E-value=0.27 Score=47.92 Aligned_cols=34 Identities=32% Similarity=0.287 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+.+|.|||+|..|...|..|++ .|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~------~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL------KGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 3689999999999999999988 689999999864
No 433
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=90.32 E-value=0.19 Score=50.19 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=29.7
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
+|+|||+|.+|+-+|..|++.+.+ |+++++.+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHE---VEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCc---eEEEeCCCC
Confidence 799999999999999999998766 999998654
No 434
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.32 E-value=0.36 Score=48.72 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=33.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~------aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGL------AGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHH------CCCeEEEEECcHH
Confidence 345789999999999999999998 7999999999864
No 435
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.25 E-value=0.32 Score=46.84 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
...+|+|||+|..|.+.|..|+. .|+ +++|+|.++.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~------~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGL------KELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCch
Confidence 45799999999999999999988 566 9999998754
No 436
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.24 E-value=0.24 Score=48.44 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQS 117 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~ 117 (500)
-...+|||+|+|.+|..+|..|... |. +|+++|++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECC
Confidence 3458999999999999999999984 55 89999998
No 437
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.16 E-value=0.27 Score=46.01 Aligned_cols=34 Identities=9% Similarity=0.149 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|+|.|+|..|-..+..|.+ +|++|+++.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAP------QGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGG------GTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHH------CCCEEEEEEcCh
Confidence 4789999999999999999988 689999998864
No 438
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.05 E-value=0.18 Score=50.78 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=30.4
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.++|+|||||+.|+-+|..|++.+.+ |+++++..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCCC
Confidence 36899999999999999999998877 99999865
No 439
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.04 E-value=0.35 Score=46.54 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
..+|+|||+|..|...|..|+. .|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~------~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ------KNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCHH
Confidence 3689999999999999999998 576 8999998753
No 440
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.97 E-value=0.35 Score=49.11 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~------~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFAR------VGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 35789999999999999999998 799999999875
No 441
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.95 E-value=0.29 Score=47.48 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=28.9
Q ss_pred EEEEECCChhHHHHHHHHHHHH------hhcCeEEEEecCC
Q 010827 246 RVAVVGCGYSGVELAATVSERL------EEKGIVQAINVET 280 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~------~~~~~vtlv~~~~ 280 (500)
+|+|||+|.+|+-+|..|++.+ .+ |+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~---V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLD---IKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCE---EEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCce---EEEEECCC
Confidence 7999999999999999999987 44 99999864
No 442
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=89.94 E-value=0.27 Score=47.69 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCcc
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~ 282 (500)
.+|+|||+|..|+-+|..|++.+.+ |+++++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~---V~vlE~~~~~ 39 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHE---VLVAEAAEGI 39 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCC
Confidence 4899999999999999999998776 9999997543
No 443
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=89.93 E-value=0.39 Score=48.34 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=43.8
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCCC----------------cchHHHHHHHHHhCCcEEE
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGT----------------PGNREAALKVLSARKVQLV 306 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~~----------------~~~~~~~~~~l~~~gV~i~ 306 (500)
.+|+|||+|.+|+-+|..|++.+.+ |+++++.+.+..... ......+.+.+++.|++..
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 80 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLS---VAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTF 80 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCccc
Confidence 5899999999999999999987765 999998766542210 0113456677888887654
No 444
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.92 E-value=0.34 Score=49.15 Aligned_cols=33 Identities=15% Similarity=0.029 Sum_probs=30.1
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~ 279 (500)
+++|+|||+|.+|...+..|.+.+.+ |+++.+.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~---V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGAR---LTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBE---EEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCE---EEEEcCC
Confidence 68999999999999999999998887 9999863
No 445
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.72 E-value=0.33 Score=48.91 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
..++.|||.|.-|+..|..|++ .|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~------~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD------FGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 4789999999999999999999 7999999999864
No 446
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.67 E-value=0.35 Score=47.52 Aligned_cols=35 Identities=29% Similarity=0.335 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|+|+|+|..|..+|..|+. .|++|+++|+++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~------~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALG------MGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 34899999999999999999988 688999999874
No 447
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=89.67 E-value=0.24 Score=49.41 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=32.0
Q ss_pred ccEEEEECCChhHHHHHHHHHHHH-hhcCeEEEEecCCccC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERL-EEKGIVQAINVETTIC 283 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~-~~~~~vtlv~~~~~~~ 283 (500)
..+|+|||+|.+|+-+|..|++.+ .+ |+++++.+.+.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~---v~v~E~~~~~G 43 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHD---YTILERTDHVG 43 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCc---EEEEECCCCCC
Confidence 468999999999999999999877 55 99999877653
No 448
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.59 E-value=0.38 Score=46.08 Aligned_cols=34 Identities=38% Similarity=0.666 Sum_probs=30.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQS 117 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~ 117 (500)
..++|.|||+|..|.+.|..|+. .|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~------~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQ------KELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEecc
Confidence 35789999999999999999998 577 99999997
No 449
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.43 E-value=0.37 Score=45.83 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|.|||.|.-|...|..|++ .|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR------AGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCeEEEEECCH
Confidence 4689999999999999999998 689999999875
No 450
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.42 E-value=0.28 Score=46.54 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
+++|.|||.|.-|...|..|++ .|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE------WPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT------STTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 4689999999999999999998 6899999998754
No 451
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.41 E-value=0.35 Score=46.10 Aligned_cols=33 Identities=30% Similarity=0.547 Sum_probs=29.6
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (500)
++|+|||+|..|.+.|..|+. .|+ +|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~------~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL------RGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCH
Confidence 379999999999999999988 577 999999874
No 452
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.39 E-value=0.35 Score=45.56 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=31.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
++|.|||.|..|...|..|.+ .|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK------AGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHH------CCCeEEEEcCCHH
Confidence 589999999999999999998 6899999998753
No 453
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.34 E-value=0.37 Score=45.11 Aligned_cols=35 Identities=31% Similarity=0.292 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
+++|+|.|+|..|...+..|.+ +|++|++++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA------QGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCcc
Confidence 4689999999999999999998 6899999998753
No 454
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.28 E-value=0.42 Score=45.72 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.4
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 81 ~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
+|+|||+|..|...|..|++. ..+++|+++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChh
Confidence 799999999999999999883 24899999999754
No 455
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.26 E-value=0.37 Score=47.11 Aligned_cols=34 Identities=38% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+.+|.|||+|.-|.+.|..|++ .|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~------~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR------KGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT------TTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 4689999999999999999998 689999999974
No 456
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.13 E-value=0.33 Score=44.85 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (500)
..+|+|||+|-.|..+|..|++ .|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~------~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS------AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH------HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH------cCCCeEEEEcCCC
Confidence 4789999999999999999999 465 899999874
No 457
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.13 E-value=0.41 Score=45.74 Aligned_cols=33 Identities=39% Similarity=0.593 Sum_probs=29.3
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (500)
.+|+|||+|..|...|..|+. .|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~------~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA------KELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCCeEEEEeCCc
Confidence 689999999999999999988 465 899999865
No 458
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.07 E-value=0.46 Score=45.63 Aligned_cols=36 Identities=25% Similarity=0.255 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (500)
...+|+|||+|..|.+.|..|+. .++ +++++|.++.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~------~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI------KQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCChH
Confidence 34789999999999999999988 455 9999998754
No 459
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.06 E-value=0.34 Score=48.33 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..+|+|||.|..|...|..|.+ .|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~------~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS------SGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 4679999999999999999998 689999999986
No 460
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.05 E-value=0.37 Score=43.34 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=29.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||+|..|...|..|.+ .|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~------~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG------SGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 34689999999999999999988 688999999864
No 461
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.04 E-value=0.22 Score=47.22 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=30.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|.|||+|.-|...|..|++ .|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~------~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQ------SLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------HCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHH------CCCeEEEEEecc
Confidence 689999999999999999998 588999999874
No 462
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.00 E-value=0.27 Score=49.11 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=43.3
Q ss_pred EEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccCCCC--------------------CcchHHHHHHHHHhCCcEE
Q 010827 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG--------------------TPGNREAALKVLSARKVQL 305 (500)
Q Consensus 246 ~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~~~~--------------------~~~~~~~~~~~l~~~gV~i 305 (500)
+|+|||+|..|+-+|..|++.+.+ |+|+++.+.+.-.. .......+.+.+++.|++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~---V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 79 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKK---VLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPT 79 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCE
T ss_pred CEEEECCcHHHHHHHHHHHHcCCe---EEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCee
Confidence 799999999999999999998876 99999866542110 1111445567777788876
Q ss_pred EcC
Q 010827 306 VLG 308 (500)
Q Consensus 306 ~~~ 308 (500)
...
T Consensus 80 ~~~ 82 (431)
T 3k7m_X 80 AAA 82 (431)
T ss_dssp EEC
T ss_pred eec
Confidence 543
No 463
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.99 E-value=0.4 Score=46.31 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+..+|.|||+|.-|...|..|.+ .|++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~------~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE------NGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCH
Confidence 45799999999999999999998 789999999864
No 464
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.92 E-value=0.55 Score=44.52 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCeEEEEC-CcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIG-gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++|.||| +|.-|.+.|..|++ .|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~------~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRA------SGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHT------TTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHh------CCCeEEEEECCc
Confidence 46899999 99999999999988 689999999875
No 465
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.88 E-value=0.43 Score=47.01 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|+|||+|..|..+|..++. .|.+|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~------~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANG------MGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 45899999999999999999988 578999999874
No 466
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.85 E-value=0.39 Score=46.14 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||.|..|...|..|++ .|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE------AGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHh------CCCeEEEEcCCH
Confidence 34689999999999999999998 689999999874
No 467
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.83 E-value=0.31 Score=47.97 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=45.0
Q ss_pred CccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecC-CccCCCC--------------------------CcchHHHHH
Q 010827 243 SLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE-TTICPTG--------------------------TPGNREAAL 295 (500)
Q Consensus 243 ~~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~-~~~~~~~--------------------------~~~~~~~~~ 295 (500)
.+++|+|||+|.+|+-+|..|.+.+.+ |+++++. +.+.-.. -+.....+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~ 119 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTL 119 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCc---EEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHH
Confidence 357999999999999999999988765 9999987 5432110 022345677
Q ss_pred HHHHhCCcEEE
Q 010827 296 KVLSARKVQLV 306 (500)
Q Consensus 296 ~~l~~~gV~i~ 306 (500)
+.+++.|++..
T Consensus 120 ~~~~~lGl~~~ 130 (376)
T 2e1m_A 120 ALIDKLGLKRR 130 (376)
T ss_dssp HHHHHTTCCEE
T ss_pred HHHHHcCCCcc
Confidence 88888888654
No 468
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.80 E-value=0.43 Score=45.79 Aligned_cols=34 Identities=24% Similarity=0.598 Sum_probs=29.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (500)
+.+|+|||+|..|.+.|..|+. .++ +++++|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~------~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL------RQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 4689999999999999999988 455 999999864
No 469
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.68 E-value=0.47 Score=44.33 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++++|+|+|-+|.++|..|++ .|.+|++++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~------~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLS------LDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHH------cCCEEEEEECCH
Confidence 35789999999999999999998 578999998863
No 470
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=88.63 E-value=0.28 Score=50.50 Aligned_cols=37 Identities=16% Similarity=0.389 Sum_probs=31.9
Q ss_pred ccEEEEECCChhHHHHHHHHHHHH-hhcCeEEEEecCCccC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERL-EEKGIVQAINVETTIC 283 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~-~~~~~vtlv~~~~~~~ 283 (500)
.++|+|||+|.+|+-+|..|++.+ .+ |+|++..+.+.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~---V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQD---CLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCS---EEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCC---EEEEeCCCCCC
Confidence 368999999999999999999887 55 99999877543
No 471
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=88.63 E-value=0.72 Score=47.61 Aligned_cols=78 Identities=22% Similarity=0.121 Sum_probs=52.7
Q ss_pred CCeEEEECCcHHHHHH-HHHhhhcccCCCCCCeEEEEcCCCCcccCcchhhhccccccCccccccHHHHhccCCcEEEEe
Q 010827 79 KPRICILGGGFGGLYT-ALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~a-A~~L~~~~~~~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (500)
.++|.+||.|=+||++ |..|.+ +|++|++.|.+.. .+..+.++..++.+..+
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~------~G~~V~~sD~~~~---------------------~~~~~~L~~~gi~~~~G 71 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARA------LGHTVTGSDANIY---------------------PPMSTQLEQAGVTIEEG 71 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH------TTCEEEEEESCCC---------------------TTHHHHHHHTTCEEEES
T ss_pred CCEEEEEEecHhhHHHHHHHHHh------CCCEEEEECCCCC---------------------cHHHHHHHHCCCEEECC
Confidence 4789999999999986 666776 7999999998743 11234455568877654
Q ss_pred eEEEEecCCCCCCCCCceeecCcEEEcCCccEEEecEEEEeCCCCCCCCCC
Q 010827 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (500)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lIlAtG~~p~~~~i 208 (500)
. ++. .. ...+|.||+..|..+..|.+
T Consensus 72 ~----~~~-----------------~~----~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 72 Y----LIA-----------------HL----QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp C----CGG-----------------GG----CSCCSEEEECTTCCTTSHHH
T ss_pred C----CHH-----------------Hc----CCCCCEEEECCCcCCCCHHH
Confidence 2 000 00 11479999999987655543
No 472
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.62 E-value=0.25 Score=44.95 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=29.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
...+|+|+|+|..|...|..|.+ .|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~------~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG------SEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT------SEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHh------CCe-EEEEECCH
Confidence 34789999999999999999987 688 99999874
No 473
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=88.53 E-value=0.36 Score=49.22 Aligned_cols=37 Identities=22% Similarity=0.171 Sum_probs=31.9
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCccC
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~~~ 283 (500)
.++|+|||+|.+|+-+|..|++.+.+ |+++++.+.+.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCCCC
Confidence 46999999999999999999987765 99999876543
No 474
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.49 E-value=0.39 Score=45.58 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|.|||.|..|...|..|.+ .|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~------~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK------AGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHh------CCCeEEEEcCCH
Confidence 4689999999999999999998 689999999874
No 475
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.49 E-value=0.77 Score=46.78 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHhCC-cEEEcCceEEEEecCccccccccCCCCCcccccccccCCcceeEeecccccCCCccEEeecEEE
Q 010827 288 PGNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (500)
Q Consensus 288 ~~~~~~~~~~l~~~g-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~l~~D~vi 366 (500)
..+.+.+.+.+.+.| ++|++++.|++|..++ +++.+.+. +++++.+|.||
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vI 305 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-----------------------DAARVTAR------DGREFVAKRVV 305 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-----------------------SSEEEEET------TCCEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-----------------------CEEEEEEC------CCCEEEcCEEE
Confidence 356677778888888 9999999999998755 55666643 55689999999
Q ss_pred EecCCC
Q 010827 367 WTVGSK 372 (500)
Q Consensus 367 ~a~G~~ 372 (500)
+|+|..
T Consensus 306 ~a~~~~ 311 (495)
T 2vvm_A 306 CTIPLN 311 (495)
T ss_dssp ECCCGG
T ss_pred ECCCHH
Confidence 999964
No 476
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=88.49 E-value=0.55 Score=48.68 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
.+||||||||+|||+||..|++ |++|+|+||.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-------G~~V~vlEk~~~ 41 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-------QHQVIVLSKGPV 41 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSCT
T ss_pred CCCEEEECccHHHHHHHHHHhc-------CCcEEEEECCCC
Confidence 4799999999999999999975 679999999864
No 477
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.19 E-value=0.38 Score=48.43 Aligned_cols=32 Identities=38% Similarity=0.452 Sum_probs=29.8
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 81 ~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+|.|||+|..|+..|..|++ .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~------~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA------RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 79999999999999999998 689999999875
No 478
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.15 E-value=0.46 Score=45.60 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=30.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.+.+|+|||+|..|.+.|..|+..+ ...++.++|.++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~----~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQS----IVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC----SCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC----CCCEEEEEeCCh
Confidence 4579999999999999999998732 125899999763
No 479
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=88.10 E-value=0.36 Score=47.02 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=29.5
Q ss_pred cEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCC
Q 010827 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (500)
Q Consensus 245 k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~ 280 (500)
.+|+|||+|.+|+-+|..|++.+.+ |+++++..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYS---VHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCE---EEEEeccC
Confidence 4899999999999999999988766 99999753
No 480
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.01 E-value=0.61 Score=40.90 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=30.3
Q ss_pred CeEEEECC-cHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|+|+|| |..|...+..|.+ +|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~------~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ------AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH------TTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH------CCCeEEEEEeCh
Confidence 68999998 9999999999998 689999999874
No 481
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.84 E-value=0.42 Score=48.76 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+.+|.|||.|..|+..|..|++.+ .|++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g----~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKC----PHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHC----TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEECCH
Confidence 468999999999999999999842 379999999875
No 482
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.83 E-value=0.28 Score=44.35 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEE-EcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLL-VDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~l-ie~~~ 118 (500)
+++|.|||+|..|...|..|.+ .|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~------~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA------AQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH------TTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEECCCH
Confidence 4689999999999999999998 6889999 88864
No 483
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.81 E-value=0.61 Score=43.47 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
.++++|||+|-+|-++|..|.+ .|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~------~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK------QGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 6899999999999999999998 578999999874
No 484
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.79 E-value=0.54 Score=45.09 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=28.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~ 117 (500)
.+++|.|||+|.-|...|..|++ .|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~------~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR------AGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH------TTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHH------CCCeEEEE-Ec
Confidence 45789999999999999999998 68999999 65
No 485
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.75 E-value=0.69 Score=44.31 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCCCeEEEECC-cHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 77 KKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 77 ~~~~~VvIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
...++|+|.|| |..|...+..|.+ .|++|+++++..
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~------~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLP------QGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGG------GTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH------CCCEEEEEECCC
Confidence 44578999997 9999999999998 689999999864
No 486
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.72 E-value=0.47 Score=45.49 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCC-CeEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~ 118 (500)
.++|.|||.|.-|...|..|++ .| ++|+++|+++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~------~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG------RNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHH------cCCCeEEEEeCCC
Confidence 4689999999999999999998 68 9999999874
No 487
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.72 E-value=0.31 Score=45.93 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=30.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
++|.|||.|.-|...|..|++ .|++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR------AGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH------HTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHH------CCCeEEEEcCCHH
Confidence 579999999999999999998 6899999998753
No 488
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.68 E-value=0.59 Score=44.35 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-eEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (500)
..++|+|||+|.+|.++|..|.+ .|+ +|++++++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~------~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLS------TAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT------TTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHH------CCCCEEEEEeCCH
Confidence 45789999999999999999998 577 999999873
No 489
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.55 E-value=0.48 Score=45.09 Aligned_cols=34 Identities=32% Similarity=0.531 Sum_probs=29.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (500)
+.+|+|||+|..|...|..|.. +|+ +++|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~------~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA------KGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCCCEEEEEcCCc
Confidence 4789999999999999999987 466 999999875
No 490
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.35 E-value=0.57 Score=39.47 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=30.1
Q ss_pred ccEEEEECCChhHHHHHHHHHHHHhhcCeEEEEecCCc
Q 010827 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (500)
Q Consensus 244 ~k~V~VvGgG~~g~e~A~~l~~~~~~~~~vtlv~~~~~ 281 (500)
+++|+|+|+|..|..++..|.+.+.+ |+++.+...
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCHH
Confidence 67999999999999999999887765 999988543
No 491
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.32 E-value=0.6 Score=46.70 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=30.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...+|.|||.|..|+..|..|++ |++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-------G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-------NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-------TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-------CCeEEEEecCHH
Confidence 34689999999999999998875 789999999753
No 492
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.27 E-value=0.8 Score=40.93 Aligned_cols=33 Identities=21% Similarity=0.178 Sum_probs=29.3
Q ss_pred CCeEEEECC-cHHHHHHHHHhh-hcccCCCCCCeEEEEcCC
Q 010827 79 KPRICILGG-GFGGLYTALRLE-SLVWQDDKKPQVLLVDQS 117 (500)
Q Consensus 79 ~~~VvIIGg-G~AGl~aA~~L~-~~~~~~~~g~~V~lie~~ 117 (500)
+++|+|.|| |..|...+..|. + +|++|++++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~------~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTY------TDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHH------CCCEEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhc------CCceEEEEecC
Confidence 466999995 999999999999 6 79999999886
No 493
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.25 E-value=0.79 Score=45.21 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=32.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCCC
Q 010827 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (500)
Q Consensus 77 ~~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (500)
...++|+|||+|..|..++..+++ .|++|+++|..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~------~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKE------MGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCC
Confidence 355799999999999999999998 6899999998654
No 494
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.18 E-value=0.6 Score=44.72 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=30.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
...+|+|||+|..|.+.|..|+..+ ...++.++|.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~----~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQG----IADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHT----CCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC----CCCEEEEEeCCc
Confidence 4479999999999999999998742 234899999864
No 495
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.09 E-value=0.47 Score=48.24 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=30.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 80 ~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
++|.|||.|..|+..|..|++.+ .|++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g----~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC----PEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC----TTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEECCH
Confidence 58999999999999999999832 389999999875
No 496
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.07 E-value=0.61 Score=41.82 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=30.6
Q ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+++|+|.|| |..|...+..|.+ +|++|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~------~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN------RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT------TTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHH------CCCEEEEEEcCc
Confidence 478999995 9999999999998 789999999974
No 497
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.04 E-value=0.6 Score=44.93 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=29.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--eEEEEcCCC
Q 010827 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (500)
Q Consensus 79 ~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (500)
..+|+|||+|..|.+.|..|+.. |+ +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecch
Confidence 47899999999999999999883 44 999999864
No 498
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.01 E-value=0.67 Score=41.23 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=29.1
Q ss_pred eEEEEC-CcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 81 RICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 81 ~VvIIG-gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
+|+||| +|..|...|..|.+ .|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~------~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT------LGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT------TTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 699999 99999999999988 689999999864
No 499
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.98 E-value=0.68 Score=44.10 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||.|.-|...|..|.+ .|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~------~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLK------QGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 34789999999999999999998 689999999874
No 500
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.97 E-value=0.65 Score=45.35 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCeEEEEcCCC
Q 010827 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (500)
Q Consensus 78 ~~~~VvIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (500)
..++|.|||.|.-|...|..|.+ .|++|+++|+++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~------~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK------GGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 45799999999999999999999 689999999875
Done!