BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010829
(499 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584934|ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223527015|gb|EEF29204.1| protein translocase secy subunit, putative [Ricinus communis]
Length = 557
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/491 (90%), Positives = 464/491 (94%), Gaps = 7/491 (1%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN +CEGSVFDPLGIN D S +N+ WES L+LLSP FES S TKR+K S AR
Sbjct: 70 WNT------NSCEGSVFDPLGINTDEYSGVNAAWESILALLSPIFESASSTKRDKPS-AR 122
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVNR+AFVGNLDQNSL
Sbjct: 123 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRDAFVGNLDQNSL 182
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQKREGEAGRKK+LQY
Sbjct: 183 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQY 242
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQVLYLRPYVNDFST WVL+SVTLLTLGS FTTY+GER SDLKLGN
Sbjct: 243 TRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTLGSVFTTYLGERTSDLKLGN 302
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFTSIISYLPASFGRTVA+AFQDGNY+GLATIIISF LLVLGIVYVQEAERKIP+
Sbjct: 303 GTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLATIIISFFLLVLGIVYVQEAERKIPL 362
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASRYTSR+GGLQ+SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI+ALKKAAVAL
Sbjct: 363 NYASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAAVAL 422
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NPGG+FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP VRPGKSTAAFLKTVL
Sbjct: 423 NPGGAFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPQVRPGKSTAAFLKTVL 482
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
SRISVLGS FLAILAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK
Sbjct: 483 SRISVLGSGFLAILAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 542
Query: 486 YKNIEFYDIDS 496
YKNIEFYDID+
Sbjct: 543 YKNIEFYDIDN 553
>gi|449524114|ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 546
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/493 (88%), Positives = 458/493 (92%), Gaps = 4/493 (0%)
Query: 6 WNKISLSLQQNC-EGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSA 64
WN L L N E SVFDPLGI PD+ S +STWE+FL TF S S TK++KS SA
Sbjct: 55 WN---LRLVSNSSESSVFDPLGIRPDLSSEFSSTWENFLGYFGQTFNSASSTKKDKSPSA 111
Query: 65 RGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS 124
RG+AAA+EDSSID GDFFKGPLPGKFL+LLGYLALSRLGIYIPLGGVNREAFVGNLDQNS
Sbjct: 112 RGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS 171
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQI PKLQDLQKREGEAGRKK+LQ
Sbjct: 172 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQ 231
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
YTRYASVGFAIVQAIGQVL+LRPYVNDFST+WVL+SVTLLTLGS TTYIGERI+DLKLG
Sbjct: 232 YTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLG 291
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIP 304
NGTSLLIFTSIISYLPASFGRT A+AFQDGNY+GL IIISF LLVLGIVYVQEAERKIP
Sbjct: 292 NGTSLLIFTSIISYLPASFGRTTAQAFQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIP 351
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
+NYASRYTSR GGLQ+SAYLPFKVNSSGVMPIIFSTS+LALPGTLARFTG++ LKKAA+A
Sbjct: 352 LNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALA 411
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA++LK V
Sbjct: 412 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLKAV 471
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
LSRISVLGS FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ
Sbjct: 472 LSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 531
Query: 485 KYKNIEFYDIDSY 497
KYKNIEFYDID Y
Sbjct: 532 KYKNIEFYDIDRY 544
>gi|224142301|ref|XP_002324497.1| SecY protein [Populus trichocarpa]
gi|222865931|gb|EEF03062.1| SecY protein [Populus trichocarpa]
Length = 478
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/481 (90%), Positives = 456/481 (94%), Gaps = 4/481 (0%)
Query: 18 EGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSID 77
+ S FDPLGIN +V S LN++WES L+ LSP FES S TK++K RGVAAA+EDSSID
Sbjct: 1 DCSSFDPLGINSNVPSSLNASWESLLAFLSPIFESASSTKKDK----RGVAAAIEDSSID 56
Query: 78 FGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
FGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVN+EAF GNLDQNSLLSTLDSFSGGGI
Sbjct: 57 FGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNQEAFAGNLDQNSLLSTLDSFSGGGI 116
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
GRLGICSLGIVPFINAQIVFQLLAQI PKLQDLQKREGEAGRKK+LQYTRYASVGFAIVQ
Sbjct: 117 GRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKLLQYTRYASVGFAIVQ 176
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIGQVLYLRPYV+DF+T WVLTSVTLLTLGS FTTYIGERISDLKLGNGTSLLIFTSIIS
Sbjct: 177 AIGQVLYLRPYVDDFNTQWVLTSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSIIS 236
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
YLPASFGRT AEAFQDGNY+GL TII SF LLVLGIVYVQEAERKIP+NYASRYTSRSGG
Sbjct: 237 YLPASFGRTAAEAFQDGNYVGLGTIIFSFFLLVLGIVYVQEAERKIPLNYASRYTSRSGG 296
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
LQ+SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI+ALKKAA+ALNPGGSFYLPTNI
Sbjct: 297 LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAALALNPGGSFYLPTNI 356
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS FLA
Sbjct: 357 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSAFLA 416
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDSY 497
ILAAGP+VIEQ +HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID Y
Sbjct: 417 ILAAGPSVIEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRY 476
Query: 498 G 498
G
Sbjct: 477 G 477
>gi|15224214|ref|NP_179461.1| Preprotein translocase subunit secY [Arabidopsis thaliana]
gi|12643748|sp|Q38885.2|SCY1_ARATH RecName: Full=Preprotein translocase subunit SCY1, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|15983352|gb|AAL11544.1|AF424550_1 At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|4185137|gb|AAD08940.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|16604410|gb|AAL24211.1| At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|17473607|gb|AAL38269.1| putative preprotein translocase SECY protein [Arabidopsis thaliana]
gi|27363258|gb|AAO11548.1| At2g18710/MSF3.9 [Arabidopsis thaliana]
gi|330251702|gb|AEC06796.1| Preprotein translocase subunit secY [Arabidopsis thaliana]
Length = 551
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/492 (86%), Positives = 459/492 (93%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN + ++ E SVFDPLGINPD S L+S WESF+SLLSP+FES+SG +R+K SS R
Sbjct: 58 WNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSFESSSGNRRDKPSSGR 117
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVNREAFVGNLDQNS+
Sbjct: 118 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSI 177
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLD+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQY
Sbjct: 178 LSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQY 237
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQV YLRPYVNDFST+WV++SVTLLTLGS TTYIGERISDLKLGN
Sbjct: 238 TRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGN 297
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFTSIISYLPASFGRT AEA Q+GNY GL TI++SF+LLVLGIVYVQEAERKIP+
Sbjct: 298 GTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPL 357
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASRYTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL
Sbjct: 358 NYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFAL 417
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVL
Sbjct: 418 TPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVL 477
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK
Sbjct: 478 GRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 537
Query: 486 YKNIEFYDIDSY 497
YKNIEFY++D Y
Sbjct: 538 YKNIEFYELDKY 549
>gi|297836616|ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
lyrata]
gi|297332030|gb|EFH62449.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
lyrata]
Length = 549
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/492 (86%), Positives = 461/492 (93%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN + ++ E SVFDPLGINPD S L+S WESF+SLLSP++ES+SG+KR+K SS R
Sbjct: 56 WNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSYESSSGSKRDKPSSGR 115
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVNREAFVGNLDQNS+
Sbjct: 116 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSI 175
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLD+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQY
Sbjct: 176 LSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQY 235
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQV YLRPYVNDFST+W ++SVTLL+LGS TTYIGERISDLKLGN
Sbjct: 236 TRYASVGFAIVQAIGQVFYLRPYVNDFSTEWAISSVTLLSLGSVLTTYIGERISDLKLGN 295
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFTSIISYLPASFGRT AEA Q+GNY GLATI++SF+LLVLGIVYVQEAERKIP+
Sbjct: 296 GTSLLIFTSIISYLPASFGRTAAEALQEGNYTGLATIVVSFLLLVLGIVYVQEAERKIPL 355
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASRYTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL
Sbjct: 356 NYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFAL 415
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVL
Sbjct: 416 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVL 475
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK
Sbjct: 476 GRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 535
Query: 486 YKNIEFYDIDSY 497
YKNIEFY++D Y
Sbjct: 536 YKNIEFYELDKY 547
>gi|449464360|ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 571
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/488 (86%), Positives = 450/488 (92%), Gaps = 4/488 (0%)
Query: 6 WNKISLSLQQNC-EGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSA 64
WN L L N E SVFDPLGI PD+ S +STWE+FL TF S S TK++KS SA
Sbjct: 55 WN---LRLVSNSSESSVFDPLGIRPDLSSEFSSTWENFLGYFGQTFNSASSTKKDKSPSA 111
Query: 65 RGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS 124
RG+AAA+EDSSID GDFFKGPLPGKFL+LLGYLALSRLGIYIPLGGVNREAFVGNLDQNS
Sbjct: 112 RGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS 171
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQI PKLQDLQKREGEAGRKK+LQ
Sbjct: 172 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQ 231
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
YTRYASVGFAIVQAIGQVL+LRPYVNDFST+WVL+SVTLLTLGS TTYIGERI+DLKLG
Sbjct: 232 YTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLG 291
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIP 304
NGTSLLIFTSIISYLPASFGRT A+AFQDGNY+GL IIISF LLVLGIVYVQEAERKIP
Sbjct: 292 NGTSLLIFTSIISYLPASFGRTTAQAFQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIP 351
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
+NYASRYTSR GGLQ+SAYLPFKVNSSGVMPIIFSTS+LALPGTLARFTG++ LKKAA+A
Sbjct: 352 LNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALA 411
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA++LK V
Sbjct: 412 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLKAV 471
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
LSRISVLGS FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ
Sbjct: 472 LSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 531
Query: 485 KYKNIEFY 492
K + ++
Sbjct: 532 KKPSDSYF 539
>gi|356517020|ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 540
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/492 (84%), Positives = 456/492 (92%), Gaps = 2/492 (0%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN LS + E + FDPLGIN D+ S LNSTW++ + ++ TFESTS ++ K +S++
Sbjct: 51 WNTRHLS--TSSELANFDPLGINSDLSSGLNSTWKNLVCSITQTFESTSSAEKGKPNSSQ 108
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAFVGNLDQNSL
Sbjct: 109 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSL 168
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLDSFSGGGIGRLG+CSLGIVPFINAQIVFQLLAQ+ PKLQDLQKREGEAGRKKVLQY
Sbjct: 169 LSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQY 228
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQVL+LRPYVNDFST+WV++SV LLTLGS FT YIGERI+DLKLGN
Sbjct: 229 TRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVISSVILLTLGSVFTMYIGERITDLKLGN 288
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFT+IISYLPASFGRT+A+AF D NYIGL TI++SF LLV+GIVYVQEAERKIP+
Sbjct: 289 GTSLLIFTNIISYLPASFGRTIAQAFNDANYIGLGTIVLSFFLLVVGIVYVQEAERKIPL 348
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASR+TSRS GL++SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+ ALKKAAVAL
Sbjct: 349 NYASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKAAVAL 408
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NPGGSFYLP NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG++TA F+KTVL
Sbjct: 409 NPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRTTATFIKTVL 468
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
SRISVLGS FLAILAAGPAV+EQ THLTAFRGFAGTS+LILVGCATDTARKVQAEIISQK
Sbjct: 469 SRISVLGSTFLAILAAGPAVVEQITHLTAFRGFAGTSILILVGCATDTARKVQAEIISQK 528
Query: 486 YKNIEFYDIDSY 497
YKNIEFYD D Y
Sbjct: 529 YKNIEFYDFDKY 540
>gi|1049293|gb|AAB60305.1| SecY homolog; targetted to the thylakoid membrane; the protein has
a chloroplast targetting signal, but the processing site
is not known [Arabidopsis thaliana]
Length = 551
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/492 (86%), Positives = 459/492 (93%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN + ++ E SVFDPLGINPD S L+S WESF+SLLSP+FES+SG +R+K SS R
Sbjct: 58 WNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSFESSSGNRRDKPSSGR 117
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVNREAFVGNLDQNS+
Sbjct: 118 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSI 177
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLD+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQY
Sbjct: 178 LSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQY 237
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQV YLRPYVNDFST+WV++SVTLLTLGS TTYIGERISDLKLGN
Sbjct: 238 TRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSLLTTYIGERISDLKLGN 297
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFTSIISYLPASFGRT AEA Q+GNY GL TI++SF+LLVLGIVYVQEAERKIP+
Sbjct: 298 GTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPL 357
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASRYTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL
Sbjct: 358 NYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFAL 417
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVL
Sbjct: 418 TPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVL 477
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK
Sbjct: 478 GRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 537
Query: 486 YKNIEFYDIDSY 497
YKNIEFY++D Y
Sbjct: 538 YKNIEFYELDKY 549
>gi|218200780|gb|EEC83207.1| hypothetical protein OsI_28473 [Oryza sativa Indica Group]
Length = 1155
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/500 (83%), Positives = 452/500 (90%), Gaps = 6/500 (1%)
Query: 4 NLWNKISLSLQQNCE----GSVFDPLGINPDVCSH--LNSTWESFLSLLSPTFESTSGTK 57
L K + ++ C G FDPLG+ D S S SF +LSP F S+SG +
Sbjct: 654 KLGKKKKVGTKEGCALETAGPGFDPLGLYNDGPSRNDTQSPLSSFFGILSPVFGSSSGGR 713
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
+EKSS RG AAA+EDSSID GDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNR+AF
Sbjct: 714 KEKSSYGRGAAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFA 773
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
GNLDQNSLL TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEA
Sbjct: 774 GNLDQNSLLGTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEA 833
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
GRKKVLQYTRYASVGFAIVQAIGQVL+LRPYVNDFST+WVLTSVTLLTLGS FTT+IGER
Sbjct: 834 GRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGER 893
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQ 297
ISDLKLGNGTSLLIFTSIISYLPASFGRTVA+AFQDGNY+GL TII+SF++LVLGIVYVQ
Sbjct: 894 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLLTIILSFLVLVLGIVYVQ 953
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
EAERKIP+NYASRY+SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+
Sbjct: 954 EAERKIPLNYASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLDF 1013
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
LKKAA++LNPGG+ Y+PTN+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKST
Sbjct: 1014 LKKAAISLNPGGALYIPTNVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKST 1073
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
AAF+KTVLS ISVLGS FLA+LAAGP+V+EQ THLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 1074 AAFIKTVLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGFAGTSVLILVGCATDTARKV 1133
Query: 478 QAEIISQKYKNIEFYDIDSY 497
QAEIISQKYKNIEFYD++ +
Sbjct: 1134 QAEIISQKYKNIEFYDVNRF 1153
>gi|115475569|ref|NP_001061381.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|75294264|sp|Q6ZG25.1|SECY_ORYSJ RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|37572923|dbj|BAC98517.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|37573023|dbj|BAC98535.1| putative Preprotein translocase secY subunit, chloroplast precursor
[Oryza sativa Japonica Group]
gi|113623350|dbj|BAF23295.1| Os08g0254500 [Oryza sativa Japonica Group]
gi|125602744|gb|EAZ42069.1| hypothetical protein OsJ_26630 [Oryza sativa Japonica Group]
Length = 556
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/481 (85%), Positives = 444/481 (92%), Gaps = 3/481 (0%)
Query: 19 GSVFDPLGINPDVCSH--LNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSI 76
G FDPLG+ D S S +F +LSP F S+SG ++EKS RG AAA+EDSSI
Sbjct: 75 GPGFDPLGLYNDGPSRNDTQSPLSNFFGVLSPVFGSSSGGRKEKSY-GRGAAAAIEDSSI 133
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
D GDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNR+AF GNLDQNSLL TLDSFSGGG
Sbjct: 134 DIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLLGTLDSFSGGG 193
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
IGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKKVLQYTRYASVGFAIV
Sbjct: 194 IGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIV 253
Query: 197 QAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
QAIGQVL+LRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSII
Sbjct: 254 QAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSII 313
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
SYLPASFGRTVA+AFQDGNY+GL TII+SF+ LVLGIVYVQEAERKIP+NYASRY+SRSG
Sbjct: 314 SYLPASFGRTVAQAFQDGNYVGLLTIILSFLFLVLGIVYVQEAERKIPLNYASRYSSRSG 373
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+ LKKAA++LNPGG+ Y+PTN
Sbjct: 374 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNPGGALYIPTN 433
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAAF+KTVLS ISVLGS FL
Sbjct: 434 VLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKTVLSNISVLGSAFL 493
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDS 496
A+LAAGP+V+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 494 AVLAAGPSVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVNR 553
Query: 497 Y 497
+
Sbjct: 554 F 554
>gi|242081045|ref|XP_002445291.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
gi|241941641|gb|EES14786.1| hypothetical protein SORBIDRAFT_07g007870 [Sorghum bicolor]
Length = 552
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/482 (84%), Positives = 444/482 (92%), Gaps = 3/482 (0%)
Query: 19 GSVFDPLGINPDVC-SHLNSTWESFLSLLSPTFESTSG--TKREKSSSARGVAAAMEDSS 75
G FDPLG+ + S S +F +L+P F S+SG +REK+S RG AAA+EDSS
Sbjct: 69 GPGFDPLGLYEEGSDSPSRSPLSNFFGILAPVFGSSSGGGARREKASYGRGAAAAIEDSS 128
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 129 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 188
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 189 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 248
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
QAIGQVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 249 FQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 308
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRTVA+AFQDGNY+GL TII+SF LLVLGIVYVQEAERKIP+NYASRY+SR+
Sbjct: 309 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFFLLVLGIVYVQEAERKIPLNYASRYSSRT 368
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF G+ LKKAA+ALNPGG+ YLPT
Sbjct: 369 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFAGLDFLKKAAIALNPGGALYLPT 428
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAA++KTVLSRISVLGS F
Sbjct: 429 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSAF 488
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LA+LAAGP+V+EQ +HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 489 LAVLAAGPSVVEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 548
Query: 496 SY 497
+
Sbjct: 549 RF 550
>gi|359484929|ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Vitis vinifera]
Length = 546
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/496 (87%), Positives = 462/496 (93%), Gaps = 4/496 (0%)
Query: 4 NLWNKISLSLQQN-CEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSS 62
N WN L+L N C+G VFDPLGI+ D LN+TWES L LLS TF STS TK++KS+
Sbjct: 53 NSWN---LALFCNSCKGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSA 109
Query: 63 SARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ 122
S +GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG LALSRLG+Y+PLGGVNREAFVGNLDQ
Sbjct: 110 SGQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQ 169
Query: 123 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
NSLL+TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL QI PKLQDLQKREGE GRKKV
Sbjct: 170 NSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKV 229
Query: 183 LQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
LQYTRYASVGFA+VQAIGQVL+LRPYVNDFST WVL+SVTLLTLGS TTYIGERISDLK
Sbjct: 230 LQYTRYASVGFALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLK 289
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERK 302
LGNGTSLLIFTSIISYLPASFGRTVA+AFQDGNYIGL IIISF LLVLGIVYVQEAERK
Sbjct: 290 LGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERK 349
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA 362
IP+NYASRYT+R+GGLQ+SAYLPFKVNSSGVMPIIFSTSSLALPGT++RFTG+AALKKAA
Sbjct: 350 IPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAA 409
Query: 363 VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+ALNPGGS YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF+K
Sbjct: 410 LALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 469
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 482
VLSRISVLGS FLAILAAGP+++EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII
Sbjct: 470 MVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 529
Query: 483 SQKYKNIEFYDIDSYG 498
SQKYKNIEFYDID G
Sbjct: 530 SQKYKNIEFYDIDRLG 545
>gi|297736055|emb|CBI24093.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/482 (88%), Positives = 455/482 (94%)
Query: 17 CEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSI 76
C+G VFDPLGI+ D LN+TWES L LLS TF STS TK++KS+S +GVAAA+EDSSI
Sbjct: 95 CKGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIEDSSI 154
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
DFGDFFKGPLPGKFLKLLG LALSRLG+Y+PLGGVNREAFVGNLDQNSLL+TLDSFSGGG
Sbjct: 155 DFGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFSGGG 214
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
IGRLGICSLGIVPFINAQIVFQLL QI PKLQDLQKREGE GRKKVLQYTRYASVGFA+V
Sbjct: 215 IGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGFALV 274
Query: 197 QAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
QAIGQVL+LRPYVNDFST WVL+SVTLLTLGS TTYIGERISDLKLGNGTSLLIFTSII
Sbjct: 275 QAIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSII 334
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
SYLPASFGRTVA+AFQDGNYIGL IIISF LLVLGIVYVQEAERKIP+NYASRYT+R+G
Sbjct: 335 SYLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTNRTG 394
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
GLQ+SAYLPFKVNSSGVMPIIFSTSSLALPGT++RFTG+AALKKAA+ALNPGGS YLPTN
Sbjct: 395 GLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYLPTN 454
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF+K VLSRISVLGS FL
Sbjct: 455 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFL 514
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDS 496
AILAAGP+++EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID
Sbjct: 515 AILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDR 574
Query: 497 YG 498
G
Sbjct: 575 LG 576
>gi|357145358|ref|XP_003573616.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Brachypodium distachyon]
Length = 548
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/480 (84%), Positives = 437/480 (91%), Gaps = 2/480 (0%)
Query: 19 GSVFDPLGINPD--VCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSI 76
G FDPLG+ D S S +F +L P F S+SG++ EKSS RG AAAMEDSSI
Sbjct: 66 GPAFDPLGLYKDDPSGSDYQSPLSTFFGILLPVFGSSSGSRNEKSSYGRGAAAAMEDSSI 125
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
D GDFFKGPLPGKFLKLLG+L LSR+G+Y+PLGGVNREAF GNLDQNSLL TLDSFSGGG
Sbjct: 126 DIGDFFKGPLPGKFLKLLGFLVLSRIGVYVPLGGVNREAFAGNLDQNSLLGTLDSFSGGG 185
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
IGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQYTRYASVGFAIV
Sbjct: 186 IGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIV 245
Query: 197 QAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
QAIGQVL+LRPYVNDFST+WVLTSVTLLTLGS FTT++GE IS+LKLGNGTSLLIFTSII
Sbjct: 246 QAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFLGETISELKLGNGTSLLIFTSII 305
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
SYLPASFGRTVAE FQ GNY+GL TII+SF LVLGIVYVQEAERKIP+NYASRY+SR+G
Sbjct: 306 SYLPASFGRTVAEGFQAGNYVGLLTIILSFFFLVLGIVYVQEAERKIPLNYASRYSSRTG 365
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
G QRSAYLPFKVNSSGVMPIIFSTSSLALP TLARFTG+ LKKAA+AL PGGSFYLPTN
Sbjct: 366 GPQRSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLDFLKKAAIALTPGGSFYLPTN 425
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAAF+KTVLSRISVLGS FL
Sbjct: 426 VLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSGFL 485
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDS 496
A+LAAGP+V+EQ +HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD+ S
Sbjct: 486 AVLAAGPSVVEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVKS 545
>gi|381388744|ref|NP_001105505.2| preprotein translocase subunit SECY, chloroplastic [Zea mays]
gi|194701264|gb|ACF84716.1| unknown [Zea mays]
Length = 553
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/483 (84%), Positives = 449/483 (92%), Gaps = 4/483 (0%)
Query: 19 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSGTK--REKSSSARGVAAAMEDSS 75
G FDPLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSS
Sbjct: 71 GPGFDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKAS-GRGAAAAIEDSS 129
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 130 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 189
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 190 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 249
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 250 VQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYVQEAERKIP+NYASRY+SR+
Sbjct: 310 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRT 369
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF+G+ LKKAA+ALNPGG+ YLPT
Sbjct: 370 GELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPT 429
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAA++KTVLSRISVLGS F
Sbjct: 430 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSAF 489
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LA+LAAGP+++EQT+HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 490 LAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 549
Query: 496 SYG 498
+G
Sbjct: 550 RFG 552
>gi|12643627|sp|O63066.1|SECY_MAIZE RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|2934902|gb|AAC05019.1| cpSecY [Zea mays]
Length = 553
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/483 (84%), Positives = 449/483 (92%), Gaps = 4/483 (0%)
Query: 19 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSGTK--REKSSSARGVAAAMEDSS 75
G FDPLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSS
Sbjct: 71 GPGFDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKAS-GRGAAAAIEDSS 129
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 130 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 189
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 190 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 249
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 250 VQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYVQEAERKIP+NYASRY+SR+
Sbjct: 310 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRT 369
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF+G+ LKKAA+ALNPGG+ YLPT
Sbjct: 370 GELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPT 429
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAA++KTVL+RISVLGS F
Sbjct: 430 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLNRISVLGSAF 489
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LA+LAAGP+++EQT+HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 490 LAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 549
Query: 496 SYG 498
+G
Sbjct: 550 RFG 552
>gi|12230545|sp|Q9XQU4.1|SECY_PEA RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|4929291|gb|AAD33936.1|AF144684_1 secY [Pisum sativum]
Length = 527
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/482 (82%), Positives = 443/482 (91%), Gaps = 11/482 (2%)
Query: 16 NCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSS 75
+C+ + FDPLGINPD+ S +STW + L++ F+++S + RGVAAA+EDSS
Sbjct: 57 SCDLANFDPLGINPDLSS--SSTWRNLLTI----FQTSS-----QKDKPRGVAAAIEDSS 105
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
IDFGDFF GPLPGKFLKLLG+LALSRLG+YIPLGGVNR+AF+GNLDQNSLL+TLDSFSGG
Sbjct: 106 IDFGDFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGG 165
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQYTRYASVGFAI
Sbjct: 166 GIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASVGFAI 225
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVL+LRPY NDF+T+W LTSV LLTLGS FTTYIGE+I++LKLGNGTSLLIFT+I
Sbjct: 226 VQAIGQVLFLRPYANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTSLLIFTNI 285
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRT ++AF D NY+GL TII+SF LLVLGIVYVQEAERKIPINYASR+TS+S
Sbjct: 286 ISYLPASFGRTFSQAFSDANYVGLVTIIVSFFLLVLGIVYVQEAERKIPINYASRFTSKS 345
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
GG+++SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+++LK AAVALNPGGSFYLP
Sbjct: 346 GGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTAAVALNPGGSFYLPF 405
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVLSRISVLGS F
Sbjct: 406 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSTF 465
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LAILAAGPAV+EQT HLTAFRGFAGTS+LILVGCATDTARKV+AEIISQKYKNIE YD D
Sbjct: 466 LAILAAGPAVVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFD 525
Query: 496 SY 497
Y
Sbjct: 526 KY 527
>gi|413916905|gb|AFW56837.1| chloroplast SecY-1 [Zea mays]
Length = 553
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/483 (84%), Positives = 448/483 (92%), Gaps = 4/483 (0%)
Query: 19 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSGTK--REKSSSARGVAAAMEDSS 75
G F PLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSS
Sbjct: 71 GPGFYPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKAS-GRGAAAAIEDSS 129
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 130 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 189
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 190 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 249
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 250 VQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYVQEAERKIP+NYASRY+SR+
Sbjct: 310 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRT 369
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF+G+ LKKAA+ALNPGG+ YLPT
Sbjct: 370 GELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPT 429
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAA++KTVLSRISVLGS F
Sbjct: 430 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSAF 489
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LA+LAAGP+++EQT+HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 490 LAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 549
Query: 496 SYG 498
+G
Sbjct: 550 RFG 552
>gi|12230582|sp|P93690.1|SECY_SPIOL RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
AltName: Full=CpSecY; Flags: Precursor
gi|1508783|emb|CAA91162.1| SecY [Spinacia oleracea]
Length = 545
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/475 (84%), Positives = 444/475 (93%)
Query: 21 VFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGD 80
VFDPLGI D + S W+ L +S TFES+SGT++++SSSARGVAAA+EDSSIDFGD
Sbjct: 70 VFDPLGIEQDNSWGVASAWDGVLKFVSQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGD 129
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
FFKGPLPGKFL LLG LALSRLGIY+PLGGVNREAFVGNLDQNS +STLDSFSGGGIGRL
Sbjct: 130 FFKGPLPGKFLTLLGLLALSRLGIYVPLGGVNREAFVGNLDQNSFISTLDSFSGGGIGRL 189
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
GICSLGIVPFINAQIVFQLL+Q+ PKLQDLQK+EGEAGRKK+ QYT+YASVGFA+VQAIG
Sbjct: 190 GICSLGIVPFINAQIVFQLLSQVYPKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQAIG 249
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
QVL+LRPYVND+ST+WVL+SV LLTLGS FTTY+GERISDLKLGNGTSLLIFT+IISYLP
Sbjct: 250 QVLFLRPYVNDYSTEWVLSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLP 309
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
ASFGRTVAEA+Q+GNY GLA I++SF+ LV GIVYVQEAERKIP+NYASRY+ +SGGLQ+
Sbjct: 310 ASFGRTVAEAYQEGNYTGLAIIVVSFVSLVFGIVYVQEAERKIPMNYASRYSGKSGGLQK 369
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLI 380
SAYLPFKVNS+GVMPIIFSTSSL+LP TLARFTG+ LKKAAVAL PGGSFYLPTNILLI
Sbjct: 370 SAYLPFKVNSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGSFYLPTNILLI 429
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA++KTVLSRISVLGS FLAILA
Sbjct: 430 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSGFLAILA 489
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
AGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAE+ISQKYKNIEFYD++
Sbjct: 490 AGPAVVEQATHLTAFRGFAGTSVLILVGCATDTARKVQAELISQKYKNIEFYDLE 544
>gi|224091887|ref|XP_002309386.1| SecY protein [Populus trichocarpa]
gi|222855362|gb|EEE92909.1| SecY protein [Populus trichocarpa]
Length = 430
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/430 (92%), Positives = 413/430 (96%)
Query: 68 AAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLS 127
AAA+EDSSIDFGDFFKGPLPGKFLKLLG+L +SRLGIYIPLGGVNREAF GNLDQNSLLS
Sbjct: 1 AAAIEDSSIDFGDFFKGPLPGKFLKLLGFLVVSRLGIYIPLGGVNREAFAGNLDQNSLLS 60
Query: 128 TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTR 187
TLDSFSGGGIGRLGI SLGIVPFINAQIVFQLLAQI PKLQDLQKREGEAGRKK+LQYTR
Sbjct: 61 TLDSFSGGGIGRLGIFSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTR 120
Query: 188 YASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
YASVGFAIVQAIGQVLYLRP+V+DFST WVLTSVTLLTLGS FTTYIGE+ISDLKLGNGT
Sbjct: 121 YASVGFAIVQAIGQVLYLRPFVDDFSTQWVLTSVTLLTLGSVFTTYIGEQISDLKLGNGT 180
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
SLLIFTSIISYLPASFG+T A+A QDGNY+GL TII SF LLVLGIVYVQEAERKIP+NY
Sbjct: 181 SLLIFTSIISYLPASFGQTAAQAIQDGNYVGLGTIIFSFFLLVLGIVYVQEAERKIPLNY 240
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
ASRYTS S GLQ+SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI+ALKKAA+ LNP
Sbjct: 241 ASRYTSSSSGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAALTLNP 300
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR
Sbjct: 301 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 360
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
ISVLGS FLAILAAGP+VIEQ +HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK
Sbjct: 361 ISVLGSTFLAILAAGPSVIEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 420
Query: 488 NIEFYDIDSY 497
NIEFYDID Y
Sbjct: 421 NIEFYDIDRY 430
>gi|302823445|ref|XP_002993375.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
gi|300138806|gb|EFJ05560.1| hypothetical protein SELMODRAFT_187415 [Selaginella moellendorffii]
Length = 503
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/472 (69%), Positives = 389/472 (82%), Gaps = 9/472 (1%)
Query: 22 FDPLGINPDVCSHLNSTWESF--LSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFG 79
FDPLGI + + W +++ + + TSG K S+ +G+AAA+EDSSIDFG
Sbjct: 35 FDPLGICEPANGNFVAAWGDLCVVAMKAIGNKQTSG----KQSTGKGIAAAIEDSSIDFG 90
Query: 80 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGR 139
DFF+G LPGKFL LLG+LALSR+G YIPL GV+R AF G++ NSL TLD+FSGGGIGR
Sbjct: 91 DFFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDRAAFSGSMTDNSLFRTLDAFSGGGIGR 150
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
LG+CSLGIVPFINAQI+FQLL + P+L+ LQK+EGEAGRKKVLQYTRYASV FAI QAI
Sbjct: 151 LGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRYASVAFAIFQAI 210
Query: 200 GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
GQVLY+RPY +DFS W+ TS++LLT+G+ T+YIGERISD+KLGNGTSLLIFT+IIS L
Sbjct: 211 GQVLYIRPYADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTSLLIFTNIISSL 270
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
PAS GRT+ +A +D NY GL TI +SF LLVLGIVYVQE+ER+IP+NYASRY SGGLQ
Sbjct: 271 PASVGRTIDQALKDANYAGLGTIGLSFFLLVLGIVYVQESERRIPLNYASRY---SGGLQ 327
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
+SAYLPFK+NSSGVMPIIFSTS+LAL ++ARF+G LNPGGSFYLPTN +L
Sbjct: 328 KSAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNNIVATLNPGGSFYLPTNAVL 387
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
IAFFNY+YTFLQLDP DVS+QLKRQGASIP VRPGK+TAAF++TVL+RISVL S FL I+
Sbjct: 388 IAFFNYFYTFLQLDPSDVSDQLKRQGASIPSVRPGKATAAFIETVLTRISVLDSTFLVIM 447
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEF 491
A PA +E THLTAFRGFAGTS+LILVGCATDTARKV+AE+ISQKY+ ++F
Sbjct: 448 AVSPAAVEWLTHLTAFRGFAGTSILILVGCATDTARKVKAELISQKYRVLDF 499
>gi|168004573|ref|XP_001754986.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694090|gb|EDQ80440.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 543
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 327/475 (68%), Positives = 385/475 (81%), Gaps = 10/475 (2%)
Query: 22 FDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGDF 81
FDPLG+ D S +W + S + + SS++G AAAMED S+DFGDF
Sbjct: 74 FDPLGLEDDSQSF---SWNAIQSAFMMSRSGSG-------SSSKGAAAAMEDKSVDFGDF 123
Query: 82 FKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
FKG LP KFL LLG+L LSR+G YIPL GV+R AF G++D NSLL TL++FSGG IGRLG
Sbjct: 124 FKGKLPEKFLILLGWLILSRIGTYIPLWGVDRSAFQGSIDTNSLLGTLNTFSGGSIGRLG 183
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+ SLGIVPFINAQIV QLL + PKLQDLQK+EGEAGRKKVL++T++ASVGF ++QA+GQ
Sbjct: 184 LASLGIVPFINAQIVVQLLGTVFPKLQDLQKKEGEAGRKKVLRWTKWASVGFGVIQAVGQ 243
Query: 202 VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
V Y+RPYV DFS +W +++V LTLG+ T IGE+ISDLKLGNGTSLLIFT+I+SYLP+
Sbjct: 244 VTYIRPYVMDFSVEWAISAVAALTLGAVITMSIGEKISDLKLGNGTSLLIFTNIVSYLPS 303
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
S G+TVA+A DGNY GLA I +F+LLVLGIVYVQEAERKIPINYASR+ + S GL +S
Sbjct: 304 SIGQTVAQAINDGNYPGLAGSIGAFLLLVLGIVYVQEAERKIPINYASRFKASSKGLGKS 363
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA 381
AYLPFKVNSSGVMPIIFS+S LALP + ARFTG++ LK AAVA P GS YLP N+LLIA
Sbjct: 364 AYLPFKVNSSGVMPIIFSSSLLALPASAARFTGLSFLKDAAVAFYPNGSLYLPANVLLIA 423
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FFNY+YTFLQLDP DVSEQLKRQGASIP VRPGK+TAAF++T L RISVLGS FL I+A
Sbjct: 424 FFNYFYTFLQLDPKDVSEQLKRQGASIPSVRPGKATAAFIETTLGRISVLGSAFLGIMAL 483
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDS 496
P ++E THLT FRGFAGTSVLILVG ATDTARKVQAE++SQKYK IEFYD+D+
Sbjct: 484 APFLVEGVTHLTTFRGFAGTSVLILVGSATDTARKVQAELVSQKYKTIEFYDVDN 538
>gi|302782363|ref|XP_002972955.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
gi|300159556|gb|EFJ26176.1| hypothetical protein SELMODRAFT_98540 [Selaginella moellendorffii]
Length = 424
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/423 (73%), Positives = 365/423 (86%), Gaps = 3/423 (0%)
Query: 69 AAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST 128
AA+EDSSIDFGDFF+G LPGKFL LLG+LALSR+G YIPL GV+R AF G++ NSL T
Sbjct: 1 AAIEDSSIDFGDFFRGKLPGKFLLLLGWLALSRVGTYIPLPGVDRAAFSGSMTDNSLFRT 60
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
LD+FSGGGIGRLG+CSLGIVPFINAQI+FQLL + P+L+ LQK+EGEAGRKKVLQYTRY
Sbjct: 61 LDAFSGGGIGRLGVCSLGIVPFINAQILFQLLGSLFPELERLQKKEGEAGRKKVLQYTRY 120
Query: 189 ASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTS 248
ASV FAI QAIGQVLY+RPY +DFS W+ TS++LLT+G+ T+YIGERISD+KLGNGTS
Sbjct: 121 ASVAFAIFQAIGQVLYIRPYADDFSLGWIFTSISLLTIGAVLTSYIGERISDIKLGNGTS 180
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYA 308
LLIFT+IIS LPAS GRT+ +A +D NY GL TI +SF LLVLGIVYVQE+ER+IP+NYA
Sbjct: 181 LLIFTNIISSLPASVGRTIDQALKDANYAGLGTIGLSFFLLVLGIVYVQESERRIPLNYA 240
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
SRY SGGLQ+SAYLPFK+NSSGVMPIIFSTS+LAL ++ARF+G LNPG
Sbjct: 241 SRY---SGGLQKSAYLPFKINSSGVMPIIFSTSALALTSSVARFSGATGFNNIVATLNPG 297
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
GSFYLPTN +LIAFFNY+YTFLQLDP DVS+QLKRQGASIP VRPGK+TAAF++TVL+RI
Sbjct: 298 GSFYLPTNAVLIAFFNYFYTFLQLDPSDVSDQLKRQGASIPSVRPGKATAAFIETVLTRI 357
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
SVL S FL I+A PA +E THLTAFRGFAGTS+LILVGCATDTARKV+AE+ISQKY+
Sbjct: 358 SVLDSTFLVIMAVSPAAVEWLTHLTAFRGFAGTSILILVGCATDTARKVKAELISQKYRV 417
Query: 489 IEF 491
++F
Sbjct: 418 LDF 420
>gi|303276823|ref|XP_003057705.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226460362|gb|EEH57656.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 423
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/404 (58%), Positives = 303/404 (75%), Gaps = 3/404 (0%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGIGRLGI 142
G LP K +L L +SR+G YIP+ GV+R AF +L +L +D+ +GG I +LGI
Sbjct: 3 GKLPEKIATVLALLVVSRIGTYIPISGVDRAAFAESLAGGGGMLGYVDTLTGGSISKLGI 62
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
SLGIVPFIN+ I+FQLL + P L LQK EGEAGR+K +QY RY ++ FA+VQA+GQ
Sbjct: 63 FSLGIVPFINSSIIFQLLTSVFPSLSKLQKEEGEAGRRKFMQYQRYGALAFAVVQAVGQC 122
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LY+RPYV DFS W++ S +LT G+ YIGE +++LKLGNGTSLLIFT+I+S LP+S
Sbjct: 123 LYVRPYVEDFSLGWLVESSAVLTAGAMILLYIGEVLNELKLGNGTSLLIFTNIVSSLPSS 182
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
FG+T++EA + G+ L +F L LGIVYVQEAERKIP+NY++R+ ++GGL +S+
Sbjct: 183 FGQTLSEAGEKGDNAVLPVFFGAFFLSTLGIVYVQEAERKIPMNYSTRF--QAGGLAKSS 240
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLPFKVNS+GVMPIIF++S LALP T+ARF + AA A+ PGG+ Y+P NI LI F
Sbjct: 241 YLPFKVNSAGVMPIIFASSLLALPATIARFAPNPVIIGAAKAVYPGGAAYVPVNIALICF 300
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
FNY+YTFLQL+P DV+EQLKRQGASIP VRPG +T ++ VLS +S+LGSVFL +LA
Sbjct: 301 FNYFYTFLQLEPKDVAEQLKRQGASIPGVRPGATTRDYITRVLSNLSLLGSVFLGVLALT 360
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
P +E T LT FRGFAGTS+LILVG ATDT RKV++E++ QKY
Sbjct: 361 PTAVEGITGLTTFRGFAGTSLLILVGVATDTTRKVRSELVMQKY 404
>gi|255081925|ref|XP_002508181.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226523457|gb|ACO69439.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 423
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/409 (57%), Positives = 307/409 (75%), Gaps = 4/409 (0%)
Query: 80 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIG 138
DF LPGK +L L LSR+G YIP+ GV+R+AF +L ++L +D+ +GG I
Sbjct: 3 DFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTLTGGSIS 62
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+LGI SLGIVP+IN+ I+FQLL + P L+ LQK EGEAGR+K QY RY ++GFA+VQA
Sbjct: 63 KLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVVQA 122
Query: 199 IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+GQ LY+RP+V DF+ W++ S +LT G+ YIGE +++LKLGNGTSLLIFT+IIS
Sbjct: 123 VGQCLYVRPFVEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFTNIISS 182
Query: 259 LPASFGRTVAEAFQDGNYIGLATIII-SFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
LP+SFG+T+++A + G+ + + +F L LGIVYVQEAERKIP+NY++R+ ++GG
Sbjct: 183 LPSSFGQTLSQASEKGDAATVLPVFFGAFFLTTLGIVYVQEAERKIPMNYSTRF--QAGG 240
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
L +S+YLPFKVNS+GVMPIIF++S LALP TLARF + AA A+ PGG Y+P NI
Sbjct: 241 LAKSSYLPFKVNSAGVMPIIFASSLLALPATLARFAPNPVIIGAAKAVYPGGVAYVPVNI 300
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
LI FFNY+YTFLQL+P DV++QLKRQGASIP VRPG +T+ ++ VL R+S+LGSVFL
Sbjct: 301 ALICFFNYFYTFLQLEPKDVADQLKRQGASIPGVRPGAATSGYITRVLERLSILGSVFLG 360
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
LA P +E T LT FRGFAGTS+LILVG ATDT RKV++EI+ +Y
Sbjct: 361 FLALAPTAVEGITGLTTFRGFAGTSLLILVGVATDTTRKVRSEIVMSRY 409
>gi|255081923|ref|XP_002508180.1| SecY protein [Micromonas sp. RCC299]
gi|226523456|gb|ACO69438.1| SecY protein [Micromonas sp. RCC299]
Length = 487
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/469 (52%), Positives = 328/469 (69%), Gaps = 7/469 (1%)
Query: 21 VFDPLGINPDVCSHL-NSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFG 79
V+DPLG+ + ++ W L + + + +S A A ++
Sbjct: 9 VWDPLGLGRAKGWEVGDNDWNESERRLEGSGSVMALARGGRSVKAMNTGAGGGGDFMN-- 66
Query: 80 DFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIG 138
DF LPGK +L L LSR+G YIP+ GV+R+AF +L ++L +D+ +GG I
Sbjct: 67 DFMNSKLPGKIGTVLLLLILSRVGTYIPISGVDRDAFAESLQGGGNVLGYVDTLTGGSIS 126
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+LGI SLGIVP+IN+ I+FQLL + P L+ LQK EGEAGR+K QY RY ++GFA+VQA
Sbjct: 127 KLGIFSLGIVPYINSSIIFQLLTSVFPSLKKLQKEEGEAGRRKFQQYQRYGALGFAVVQA 186
Query: 199 IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+GQ LY+RP+V DF+ W++ S +LT G+ YIGE +++LKLGNGTSLLIFT+IIS
Sbjct: 187 VGQCLYVRPFVEDFNLGWLVESSAVLTAGAMILLYIGEVLTELKLGNGTSLLIFTNIISS 246
Query: 259 LPASFGRTVAEAFQDGNYIGLATIII-SFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
LP+SFG+T+++A + G+ + + +F L LGIVYVQEAERKIP+NY++R+ ++GG
Sbjct: 247 LPSSFGQTLSQASEKGDAATVLPVFFGAFFLTTLGIVYVQEAERKIPMNYSTRF--QAGG 304
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
L +S+YLPFKVNS+GVMPIIF++S LALP TLARF + AA A+ PGG Y+P NI
Sbjct: 305 LAKSSYLPFKVNSAGVMPIIFASSLLALPATLARFAPNPVIIGAAKAVYPGGVAYVPVNI 364
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
LI FFNY+YTFLQL+P DV++QLKRQGASIP VRPG +T+ ++ VL R+S+LGSVFL
Sbjct: 365 ALICFFNYFYTFLQLEPKDVADQLKRQGASIPGVRPGAATSGYITRVLERLSILGSVFLG 424
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
LA P +E T LT FRGFAGTS+LILVG ATDT RKV++EI+ +Y
Sbjct: 425 FLALAPTAVEGITGLTTFRGFAGTSLLILVGVATDTTRKVRSEIVMSRY 473
>gi|2773046|gb|AAB96657.1| SecY homolog [Zea mays]
Length = 343
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/317 (77%), Positives = 270/317 (85%), Gaps = 22/317 (6%)
Query: 19 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSGTK--REKSSSARGVAAAMEDSS 75
G FDPLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSS
Sbjct: 26 GPGFDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKAS-GRGAAAAIEDSS 84
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 85 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 144
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 145 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 204
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
V QVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 205 V----QVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 260
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV--------------QEAER 301
ISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYV QEAER
Sbjct: 261 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQIFFRVLTAWVFRFQEAER 320
Query: 302 KIPINYASRYTSRSGGL 318
KIP+NYASRY+SR+G L
Sbjct: 321 KIPLNYASRYSSRTGEL 337
>gi|145346074|ref|XP_001417520.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
gi|144577747|gb|ABO95813.1| IISP family transporter: preprotein translocase SecY subunit
[Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/418 (56%), Positives = 306/418 (73%), Gaps = 6/418 (1%)
Query: 79 GDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGI 137
GDFF G LPGK + L LSR+G YIP+ GV+R AF +L +++ D+ +GG I
Sbjct: 2 GDFFGGKLPGKIATIFALLVLSRVGTYIPISGVDRAAFAESLAGGGGMMAYADTLTGGSI 61
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+LGI SLGIVP+IN+ I+FQLL + P+L+ LQK EGEAGR+K QY RY ++GFAIVQ
Sbjct: 62 SKLGIFSLGIVPYINSSIIFQLLGSVFPELKKLQKEEGEAGRRKFQQYQRYGALGFAIVQ 121
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
A+GQ LY+RP+V DF+ W+ LT G+ YIGE ++++KLGNGTSLLIF +I+S
Sbjct: 122 AVGQCLYVRPFVEDFTPIWLFEQSCALTAGAMILMYIGELLNEIKLGNGTSLLIFANIVS 181
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
LP+S G+TV+ A + G+ LA +F L LGIVYVQEAERKIP+NY++R+ +GG
Sbjct: 182 ALPSSVGQTVSMAQEKGDSSVLAVFFGAFALTTLGIVYVQEAERKIPMNYSTRFN--AGG 239
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP-GGSFYLPTN 376
L +S+YLPFKVNS+GVMPIIF++S LALP TL RFT A+ A L+P GG+ Y+P N
Sbjct: 240 LAKSSYLPFKVNSAGVMPIIFASSLLALPATLTRFTDNGAVLGVARFLSPGGGAGYVPVN 299
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+ +I FFNY+YTFLQL+P DV++QLKRQGASIP VRPG +T ++ VL R+SVLGSVFL
Sbjct: 300 VAMICFFNYFYTFLQLEPKDVADQLKRQGASIPGVRPGAATRDYITRVLERLSVLGSVFL 359
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY--KNIEFY 492
LA P +EQ T L FRGFAGTS+LILVG ATD+ARKV++E++ + Y K EFY
Sbjct: 360 GALALTPGAVEQITGLQTFRGFAGTSLLILVGVATDSARKVRSELVMESYDTKLDEFY 417
>gi|308802998|ref|XP_003078812.1| SecY homolog; targetted to the thylakoid membrane; the protein has
a chloroplast targetting signal, but the processing site
is not known (ISS) [Ostreococcus tauri]
gi|116057265|emb|CAL51692.1| SecY homolog; targetted to the thylakoid membrane; the protein has
a chloroplast targetting signal, but the processing site
is not known (ISS) [Ostreococcus tauri]
Length = 552
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/503 (49%), Positives = 333/503 (66%), Gaps = 44/503 (8%)
Query: 18 EGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSID 77
E FDPLGI DV + + SPTF G + +++ A G + ++++D
Sbjct: 61 ETPAFDPLGIL-DVSRGDDG-------IFSPTF----GFDKPRTARASGSSKTGGEANMD 108
Query: 78 FGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGG 136
+FFKG LPGK + L LSR+G YIP+ GV+R AF +L ++ +D+ +GG
Sbjct: 109 --NFFKGKLPGKIATVFALLVLSRVGTYIPISGVDRAAFAESLSGGGGVMGYVDTLTGGS 166
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTR--------- 187
I +LGI SLGIVP+IN+ I+FQLL + P+L+ LQK EGEAGR+K QY R
Sbjct: 167 ISKLGIFSLGIVPYINSSIIFQLLGSVFPELKKLQKEEGEAGRRKFQQYQRSRSIELQRL 226
Query: 188 ---------------YASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTT 232
Y ++GFAIVQA+GQ LY+RP+V DFS W+ LT G+
Sbjct: 227 KQHRLTLILFRASHRYGALGFAIVQAVGQCLYIRPFVEDFSPVWLFEQSCALTAGAMILM 286
Query: 233 YIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG 292
YIGE ++++KLGNGTSLLIF +I+S LP+S G+T+ A + G+ L +F L LG
Sbjct: 287 YIGELLNEVKLGNGTSLLIFANIVSALPSSVGQTITLAQEKGDATVLPVFFGAFALTTLG 346
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IVYVQEAERKIP+NY++R+ + GGL +S+YLPFKVNS+GVMPIIF++S LALP TL+RF
Sbjct: 347 IVYVQEAERKIPMNYSTRFNA--GGLAKSSYLPFKVNSAGVMPIIFASSLLALPATLSRF 404
Query: 353 TGIAALKKAAVALNPGG-SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
T A+ A L+PGG + Y+P N+ +I FFNY+YTFLQL+P DV++QLKRQGASIP V
Sbjct: 405 TDNGAVLGVARFLSPGGGAGYVPVNVAMICFFNYFYTFLQLEPKDVADQLKRQGASIPGV 464
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG +T ++ VL R+SVLGSVFL LA P +EQ T L FRGFAGTS+LILVG AT
Sbjct: 465 RPGAATRDYITRVLERLSVLGSVFLGALALTPGAVEQVTGLQTFRGFAGTSLLILVGVAT 524
Query: 472 DTARKVQAEIISQKY--KNIEFY 492
D+ARK+++E++ + Y K EFY
Sbjct: 525 DSARKIRSELVMESYDTKLDEFY 547
>gi|412986227|emb|CCO17427.1| preprotein translocase subunit SecY [Bathycoccus prasinos]
Length = 558
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/443 (54%), Positives = 318/443 (71%), Gaps = 7/443 (1%)
Query: 51 ESTSGTKREKSSSARGVAAAMEDSSIDFGDFF-----KGPLPGKFLKLLGYLALSRLGIY 105
E+TS KR SS +A SS D G LP K +L L +SR+G Y
Sbjct: 106 ENTSSNKRTTSSRQSTKTSAFGTSSGGDDDGNFGDFFSGDLPQKVATILALLVVSRIGAY 165
Query: 106 IPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIN 164
IP+ GV+R AF +L + ++S +D+ +GG I +LGI SLGIVPFIN+ I+FQLL+ +
Sbjct: 166 IPISGVDRTAFAESLSNTGGVMSYVDTLTGGSISKLGIFSLGIVPFINSSIIFQLLSSVF 225
Query: 165 PKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLL 224
P+LQ LQK EGE+GR++ +QY RY ++ FA++QA+GQ LY+RPYV+DFS W+ S +L
Sbjct: 226 PELQKLQKEEGESGRRQFMQYQRYGALAFALIQAVGQCLYVRPYVDDFSVMWLAESTAVL 285
Query: 225 TLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN-YIGLATII 283
T G+ YIGE +++LKLGNGTSLLIF +I+S LP+S G+TV ++ DGN LA
Sbjct: 286 TAGAMILMYIGEVLNELKLGNGTSLLIFANIVSSLPSSIGQTVEQSKTDGNGAFTLAVFF 345
Query: 284 ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSL 343
+F+L LG+VYVQEAERKIP+ Y++++ S+ GL +S+YLPFKVNS+GVMPIIFS+S +
Sbjct: 346 GAFLLSTLGVVYVQEAERKIPMQYSTKFNSQGAGLSKSSYLPFKVNSAGVMPIIFSSSLM 405
Query: 344 ALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 403
ALP TLARFT A+ A + PGG+ Y+P N+ LI FFNY+YTFLQLDP DV+EQLKR
Sbjct: 406 ALPATLARFTDNGAVTSVAKFIYPGGAGYIPVNVALICFFNYFYTFLQLDPKDVAEQLKR 465
Query: 404 QGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSV 463
QGASIP VRPGK+T ++ VL R+S+LGS+FL LA P +E+ T L FRGFAGTS+
Sbjct: 466 QGASIPGVRPGKNTREYITRVLERLSLLGSLFLGFLALTPGGVEKLTGLQTFRGFAGTSL 525
Query: 464 LILVGCATDTARKVQAEIISQKY 486
LILVG ATD ARKV++E++ QKY
Sbjct: 526 LILVGVATDCARKVKSELVMQKY 548
>gi|159467437|ref|XP_001691898.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
gi|158278625|gb|EDP04388.1| preprotein translocase secY subunit [Chlamydomonas reinhardtii]
Length = 451
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/443 (50%), Positives = 311/443 (70%), Gaps = 8/443 (1%)
Query: 52 STSGTKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGV 111
ST+ + + +++S+ G + + +FF LP K LL L LSR+G+YI L GV
Sbjct: 12 STTSSSKPRAASSLGT----DGDDFSWQEFFNSDLPKKLGGLLALLLLSRVGVYIRLPGV 67
Query: 112 NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQ 171
+ +AF +L + LL +D+ SGG I ++G+ SLGI+P+INA IV QL + P L+ +Q
Sbjct: 68 DVDAFAESLTNSGLLGYIDTLSGGSISKVGLFSLGIIPYINASIVLQLFSAAFPGLKKMQ 127
Query: 172 KREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFT 231
+ EG GR K Y + + FAIVQA+GQ+ Y+RP+V+DFS WV S T L G+
Sbjct: 128 RDEGAQGRAKFQYYQKLMAFAFAIVQAVGQLFYIRPFVDDFSPAWVAGSSTALVAGAMAL 187
Query: 232 TYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL 291
YI + IS+LKLGNGTS+LIF +I S LPAS G+ VA+ D + +A ++F L L
Sbjct: 188 VYIADTISELKLGNGTSVLIFANIASALPASVGQLVAQNESD-DPTNVAVFFVAFALTTL 246
Query: 292 GIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR 351
GI+YVQEAER+IP+NY++R +S G L R +YLPFKVN++GVMP+IF++S LALP LAR
Sbjct: 247 GIIYVQEAERRIPVNYSNRLSS--GNLARQSYLPFKVNATGVMPLIFASSILALPTALAR 304
Query: 352 FTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
+T AAL + + ++ PGG+ Y+P N+ LI FFNYYYTFLQL+P D++EQLK+ GA+IP +
Sbjct: 305 YTDSAALDEFSQSVGPGGALYVPFNVALIVFFNYYYTFLQLEPKDLAEQLKKTGAAIPAI 364
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPGK TA ++ L+R+S+LGSVFL L+A PA +E THLTAFRGFAGTSVLI+VG AT
Sbjct: 365 RPGKQTAEYVTRTLTRMSLLGSVFLGALSAAPAAVEAITHLTAFRGFAGTSVLIMVGVAT 424
Query: 472 DTARKVQAEIISQKYKNIE-FYD 493
DTAR+++AE KY++++ YD
Sbjct: 425 DTARRIRAEQAMAKYQDVDKLYD 447
>gi|302835790|ref|XP_002949456.1| hypothetical protein VOLCADRAFT_104339 [Volvox carteri f.
nagariensis]
gi|300265283|gb|EFJ49475.1| hypothetical protein VOLCADRAFT_104339 [Volvox carteri f.
nagariensis]
Length = 501
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/427 (51%), Positives = 305/427 (71%), Gaps = 6/427 (1%)
Query: 70 AMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTL 129
++ED S + +FF LP K LL L LSR+G+YI L GV+ +AF +L + LL +
Sbjct: 74 SVEDDSFSWTEFFNSNLPKKLGGLLALLLLSRVGVYIRLPGVDVDAFAESLTNSGLLGYI 133
Query: 130 DSFSGGGIGR--LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTR 187
D+ SGG I + +G+ SLGI+P+IN+ IV QL + P L+ LQ+ EG GR K Y +
Sbjct: 134 DTLSGGSISKVQVGLFSLGIIPYINSSIVLQLFSAAFPNLKKLQREEGAQGRAKFQYYQK 193
Query: 188 YASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
+ FAIVQA+GQ+ Y+RP+V+DF+ W+ S L G+ YI + IS+LKLGNGT
Sbjct: 194 LLAFVFAIVQAVGQLFYIRPFVDDFTPGWLAGSSCALVAGAMALVYIADTISELKLGNGT 253
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
S+LIF +I S LPAS G+ VA+ ++ N + LA +F LGI+YVQEAER+IP+NY
Sbjct: 254 SVLIFANIASALPASIGQLVAQNGEE-NPLNLAFFFAAFAATTLGIIYVQEAERRIPVNY 312
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
++RY+ SG L R +YLPFKVN++GVMP+IF++S LALP LAR+T AAL + + ++ P
Sbjct: 313 SNRYS--SGNLARQSYLPFKVNATGVMPLIFASSILALPAALARYTDSAALDEFSRSVGP 370
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
GG+ Y+P N+ LI FFNYYYTFLQL+P D++EQLK+ GA+IP +RPG+ TA ++ L+R
Sbjct: 371 GGALYVPFNVALIVFFNYYYTFLQLEPKDLAEQLKKSGAAIPAIRPGRQTAEYVTRTLTR 430
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+S+LGSVFL L+A PA++E THLTAFRGFAGTSVLI+VG ATDTAR+++AE KY+
Sbjct: 431 MSILGSVFLGALSAAPALVEGVTHLTAFRGFAGTSVLIMVGVATDTARRIRAEQAMAKYQ 490
Query: 488 NIE-FYD 493
+++ YD
Sbjct: 491 DVDKLYD 497
>gi|384251786|gb|EIE25263.1| pre protein translocase secY subunit [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/505 (45%), Positives = 314/505 (62%), Gaps = 28/505 (5%)
Query: 6 WNKISLSLQQNC------EGSVFDPLGINPDVCSHLNSTWES----------FLSLLSPT 49
W +I QN EGS P P S +S+ ES F+ L +
Sbjct: 42 WKRIGRLCAQNALSLKPAEGSFPRP----PQQLSRDDSSAESTSGRTEDDGWFMDFLGMS 97
Query: 50 FESTSGTKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLG 109
T + + G A D +FGDF KG LPGK +L + SR+G+Y+ L
Sbjct: 98 LRYLQATTDRRPKAQSG--AQKGDGGFNFGDFLKGDLPGKLGIILALIVFSRVGVYMRLP 155
Query: 110 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQD 169
GV+ + F + +L +D+ SGG I R+GI SLGIVP+INA I+ QLLA P L+
Sbjct: 156 GVDADRFAETVQSGGILGYIDALSGGSISRVGIFSLGIVPYINASIILQLLATTFPSLKK 215
Query: 170 LQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSA 229
LQ+ EG GR + Y + ++ A++QA+GQ+ Y+RP+V ++ W++ + L G+
Sbjct: 216 LQREEGPQGRARFQLYQKLLALAAAVIQAVGQLTYIRPFVPEWDATWLVVNSLTLVAGAM 275
Query: 230 FTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL 289
++ + I++LKLGNGTS+LI +I S LPAS G V +A D + L ++F L
Sbjct: 276 VLVHVADMITELKLGNGTSILITANIASALPASVGAAVQQA-ADKDSSSLPIYGLAFFLT 334
Query: 290 VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
LGIVYVQEAERKIP+NYASRY R+ L + +YLPFKVN++GVMP+IFS++ ++LP L
Sbjct: 335 TLGIVYVQEAERKIPMNYASRY--RNSALSQQSYLPFKVNATGVMPVIFSSTLMSLPTGL 392
Query: 350 ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
AR+ L+ A AL P G YLP N+LLI FNYYYTFLQLDP D+S+QLKR GASIP
Sbjct: 393 ARYA--PWLEPVAAALGPTGLLYLPINVLLIVLFNYYYTFLQLDPKDMSDQLKRAGASIP 450
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
VRPG++TA ++ L+R+S+LGS FL LAA P ++E T L AFRGFAGTS+LILVG
Sbjct: 451 AVRPGRATADYITKTLNRMSILGSAFLGALAAAPPLVESVTGLQAFRGFAGTSILILVGV 510
Query: 470 ATDTARKVQAEIISQKYKNIE-FYD 493
ATDTAR+V+AE Q+YK+ + YD
Sbjct: 511 ATDTARRVKAEQAMQRYKDYDNLYD 535
>gi|307110115|gb|EFN58352.1| hypothetical protein CHLNCDRAFT_59612 [Chlorella variabilis]
Length = 523
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/438 (54%), Positives = 308/438 (70%), Gaps = 9/438 (2%)
Query: 62 SSARGVAAAMEDSSID-----FGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF 116
+ RG A+ S D FGDF G LP K LLG + SRLG+Y+ L GV+ +AF
Sbjct: 86 AETRGRGQALSSVSGDQEGATFGDFIGGDLPKKLALLLGLIVFSRLGVYLRLPGVDVDAF 145
Query: 117 VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGE 176
+ + ++ +D+ SGG I ++G+ SLGIVP+INA I+FQLLA P L+ LQ+ EG
Sbjct: 146 SEAMAGSGIMGYIDTLSGGSISKVGVFSLGIVPYINASILFQLLATAFPSLKKLQREEGP 205
Query: 177 AGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
GR + QY + A++ FA+ QA GQ+ YLRPYV DFS W+ +V LLT G+ Y+ +
Sbjct: 206 QGRARFQQYQKLAALAFAVAQAAGQLTYLRPYVADFSAGWLAENVVLLTAGAMILVYVAD 265
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV 296
I++LKLGNGTS+LIF +I S LP S G + +A D + L +S+ L LGIVYV
Sbjct: 266 TITELKLGNGTSILIFANIASALPTSVGAALTQA-ADKDTSVLGVYALSWFLTTLGIVYV 324
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
Q+AER+IPI YASRY R+G LQ+ AYLPFKVN++GVMP+IFS+S LALP +LAR+ +
Sbjct: 325 QDAERQIPITYASRY--RAGALQQQAYLPFKVNATGVMPVIFSSSLLALPSSLARYANVP 382
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
AL+ AAVAL+P G+ YLP N+ LI FNY YTFLQLDP D+SEQLKRQGASIP VRPG++
Sbjct: 383 ALESAAVALSPSGALYLPANVALIVAFNYLYTFLQLDPKDLSEQLKRQGASIPGVRPGRA 442
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA F+ L R+SVLGSVFL LAA PA++E T L AFRGFAGTSVLILVG ATDTAR+
Sbjct: 443 TAEFITKTLDRMSVLGSVFLGALAAAPALVESVTGLQAFRGFAGTSVLILVGVATDTARR 502
Query: 477 VQAEIISQKYKNIE-FYD 493
++E+ KYK+I+ YD
Sbjct: 503 FRSELAMSKYKDIDRLYD 520
>gi|427714140|ref|YP_007062764.1| protein translocase subunit SecY [Synechococcus sp. PCC 6312]
gi|427378269|gb|AFY62221.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
6312]
Length = 436
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/410 (43%), Positives = 276/410 (67%), Gaps = 6/410 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L LG L L RLGIY+P+ G++R+ F + NS++ LD FSGGGI LGI +L
Sbjct: 24 LRSRVLVTLGLLILVRLGIYLPVPGIDRQVFAAAVQNNSVIRFLDIFSGGGISALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QL+ P L+ LQK EGEAGR+K+ Q TRY ++G+AI+Q+ G +++
Sbjct: 84 GILPYINASIIMQLMTAALPSLERLQKDEGEAGRRKISQITRYVALGWAIIQSTGIAIFV 143
Query: 206 RPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
T ++ + LT GS F ++ E I++ +GNG SLLIF SI++YLP+S
Sbjct: 144 NSIPGAALTPGSLFLAETALALTAGSMFVMWVSELITERGIGNGASLLIFLSIVAYLPSS 203
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G+T+A A G+ G+ + + F+++++GIV+VQE R+IPI A R R ++++
Sbjct: 204 VGQTIALAESGGSIGGIIVLALVFLVMIVGIVFVQEGTRRIPIVSARRQVGRRLYREQTS 263
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N GVMPIIF+++ L LP TLA+F+ A + + A L+PGG Y+ ++L
Sbjct: 264 YLPLRLNQGGVMPIIFASAMLILPSTLAQFSQNAVVAQVAAYLSPGGPTPWVYVMFYLVL 323
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L ++P D+S+ LK+ GASIP +RPGK+T+ +++ VL+R+++LG++FL ++
Sbjct: 324 ILFFSYFYASLVVNPVDMSQNLKKMGASIPGIRPGKATSDYIEKVLNRLTLLGAIFLGLV 383
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P +E T +T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 384 AIVPTAVESATRVTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 433
>gi|218245122|ref|YP_002370493.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8801]
gi|218165600|gb|ACK64337.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8801]
Length = 438
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 269/398 (67%), Gaps = 10/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++REAF + + +L LD F+GGGI LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGIFIPIPGIDREAFAAAISSSPVLGFLDIFTGGGISTLGIFALGILPYINASIIIQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ QYTRY S+G+A++Q++G + LRPY + S +V+
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKIAQYTRYVSLGWAVIQSMGITIGLLRPYAFNNSAWFVVE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V LT GS F ++ E I++ +GNG SLLIF SI++ LP + G T+ A Q G +
Sbjct: 159 TVIALTAGSMFVMWLSEIITERGIGNGASLLIFVSIVASLPRTLGNTIDYA-QTGGRQAV 217
Query: 280 ATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A ++I F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 218 AQVVILLFVFLIMIVGIVFVQEGTRRIPIISARRQVGRRLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP +LA F G L + A AL PG Y+ LLI FF+Y+Y L
Sbjct: 278 IFASAVLILPQSLAGFFGNQGTVSQVLVQIANALQPGSWTYIGVYSLLILFFSYFYASLI 337
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+DVS+ LK+ GASIP +RPG+ T +L+ VL+R++ LG+VFL+++A P ++E T
Sbjct: 338 VNPEDVSKNLKKMGASIPGIRPGEKTKQYLEGVLNRLTFLGAVFLSVVATVPTLVEGATG 397
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 VTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|257058147|ref|YP_003136035.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 8802]
gi|256588313|gb|ACU99199.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 8802]
Length = 438
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 268/398 (67%), Gaps = 10/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++REAF + + +L LD F+GGGI LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGIFIPIPGIDREAFAAAISSSPVLGFLDIFTGGGISTLGIFALGILPYINASIIIQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ QYTRY S+G+A++Q++G + LRPY + S +V+
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKIAQYTRYVSLGWAVIQSMGITIGLLRPYAFNNSAWFVVE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V LT GS F ++ E I++ +GNG SLLIF SI++ LP + G T+ A Q G +
Sbjct: 159 TVIALTAGSMFVMWLSEIITERGIGNGASLLIFVSIVASLPRTLGNTIDYA-QTGGRQAV 217
Query: 280 ATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A ++I F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 218 AQVVILLFVFLIMIVGIVFVQEGTRRIPIISARRQVGRRLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP +LA F G L + A L PG Y+ LLI FF+Y+Y L
Sbjct: 278 IFASAVLILPQSLAGFFGNQGTVSQVLVQIANTLQPGSWTYIGVYSLLILFFSYFYASLI 337
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+DVS+ LK+ GASIP +RPG+ T +L+ VL+R++ LG+VFL+++A P ++E T
Sbjct: 338 VNPEDVSKNLKKMGASIPGIRPGEKTKQYLEGVLNRLTFLGAVFLSVVATVPTLVEGATG 397
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 VTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|434400523|ref|YP_007134527.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
gi|428271620|gb|AFZ37561.1| protein translocase subunit secY/sec61 alpha [Stanieria
cyanosphaera PCC 7437]
Length = 436
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 184/413 (44%), Positives = 275/413 (66%), Gaps = 10/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLGI+IP+ G++R F + +L LD F+GGG+ LGI +L
Sbjct: 22 LRGRLLVTIGLLILVRLGIFIPVPGIDRAKFAAGIQNLPVLGFLDIFTGGGLSALGIFAL 81
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-Y 204
GI+PFINA I+ QLL P L+DLQK EGEAGR+K+ Q TRY ++G+AI+Q++G +
Sbjct: 82 GILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQITRYVALGWAIIQSLGITIGL 141
Query: 205 LRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
LRPY +V+ +V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G
Sbjct: 142 LRPYATTPGIWFVVETVVALTAGSMFVMWVSELITERGIGNGASLLIFVNIVAVLPKTLG 201
Query: 265 RTVAEAFQDGNYIGLA---TIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
+T+ E Q G +A +++ F+++++GIV+VQE R+IPI A R R +R+
Sbjct: 202 QTI-EFAQKGGREAVAQVVILLLVFLVMIIGIVFVQEGTRRIPIISARRQVGRRLYRERT 260
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-----LKKAAVALNPGGSFYLPTN 376
+YLP ++N GVMPIIF+++ L LP +LA F G + + A+AL PG Y+
Sbjct: 261 SYLPLRLNQGGVMPIIFASAVLILPSSLAGFVGGEGTVGQIVNQIAIALQPGNWTYVAFY 320
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLI FF+Y+Y L ++P D+S+ LK+ GASIP +RPGK+T+ +L+ VL+R++ LG++FL
Sbjct: 321 LLLIVFFSYFYASLIVNPVDMSQNLKKMGASIPGIRPGKATSTYLEKVLNRLTFLGAIFL 380
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
I+A P ++E T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 381 GIVATVPTLVEGATGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 433
>gi|376007809|ref|ZP_09784994.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|423062916|ref|ZP_17051706.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
gi|375323785|emb|CCE20747.1| preprotein translocase membrane subunit [Arthrospira sp. PCC 8005]
gi|406715495|gb|EKD10649.1| preprotein translocase SecY subunit [Arthrospira platensis C1]
Length = 438
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 285/443 (64%), Gaps = 19/443 (4%)
Query: 56 TKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREA 115
REK+ +A+ M ++ L G+ L +G L L RLG+++P+ G++R+A
Sbjct: 3 VSREKTPTAQETFMQMAQAA---------GLRGRILVTIGLLILVRLGVFLPIPGIDRQA 53
Query: 116 FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
F N+ + LD FSGGG LGI +LGI+P+INA I+ QL+ P L+DLQK EG
Sbjct: 54 FSQNIQNTPFIGFLDLFSGGGFSALGIFALGILPYINASIIMQLMTAALPTLEDLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYV-NDFSTDWVLTSVTLLTL--GSAFTT 232
EAGR+K+ Q TRY ++G+AI+Q+IG +++ P+ N +++ + +L L GS F
Sbjct: 114 EAGRRKISQITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVM 173
Query: 233 YIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII---SFILL 289
++ E I++ +GNG SLLIF +I++ LP S G T+ E Q G+ + ++I F+ +
Sbjct: 174 WVSELITERGIGNGASLLIFINIVAVLPQSLGSTI-ELAQSGDSAIVGRVVILLLIFLAM 232
Query: 290 VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
++GIV+VQE R+IPI A R R ++S+YLP ++N GVMPIIF+++ L LP ++
Sbjct: 233 IVGIVFVQEGTRRIPIVSARRQVGRKLYREKSSYLPLRLNQGGVMPIIFASAVLILPASI 292
Query: 350 ARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 406
++F L + + L+PGG Y+ +L+I FF+Y+Y L ++P D+++ LK+ GA
Sbjct: 293 SQFANNPVLVQISTYLSPGGPAPWLYIAFYLLMILFFSYFYASLIMNPVDMAQNLKKMGA 352
Query: 407 SIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 466
SIP +RPG++T+ +++ VL+R++ LG+VFL ++A P V+E T + FRGF TS+LIL
Sbjct: 353 SIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTFRGFGATSLLIL 412
Query: 467 VGCATDTARKVQAEIISQKYKNI 489
VG A DTA++VQ +ISQ+Y+ +
Sbjct: 413 VGVAIDTAKQVQTYVISQRYEGM 435
>gi|209527123|ref|ZP_03275637.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
gi|209492463|gb|EDZ92804.1| preprotein translocase, SecY subunit [Arthrospira maxima CS-328]
Length = 438
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 285/443 (64%), Gaps = 19/443 (4%)
Query: 56 TKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREA 115
REK+ +A+ M ++ L G+ L +G L L RLG+++P+ G++R+A
Sbjct: 3 VSREKTPTAQETFMQMAQAA---------GLRGRILVTIGLLILVRLGVFLPIPGIDRQA 53
Query: 116 FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
F N+ + LD FSGGG LGI +LGI+P+INA I+ QL+ P L+DLQK EG
Sbjct: 54 FSENIQNTPFIGFLDLFSGGGFSALGIFALGILPYINASIIMQLMTAALPTLEDLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYV-NDFSTDWVLTSVTLLTL--GSAFTT 232
EAGR+K+ Q TRY ++G+AI+Q+IG +++ P+ N +++ + +L L GS F
Sbjct: 114 EAGRRKISQITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVM 173
Query: 233 YIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII---SFILL 289
++ E I++ +GNG SLLIF +I++ LP S G T+ E Q G+ + ++I F+ +
Sbjct: 174 WVSELITERGIGNGASLLIFINIVAVLPQSLGSTI-ELAQSGDSAIVGRVVILLLIFLAM 232
Query: 290 VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
++GIV+VQE R+IPI A R R ++S+YLP ++N GVMPIIF+++ L LP ++
Sbjct: 233 IVGIVFVQEGTRRIPIVSARRQVGRKLYREKSSYLPLRLNQGGVMPIIFASAVLILPASI 292
Query: 350 ARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 406
++F L + + L+PGG Y+ +L+I FF+Y+Y L ++P D+++ LK+ GA
Sbjct: 293 SQFANNPVLVQISTYLSPGGPAPWLYIAFYLLMILFFSYFYASLIMNPVDMAQNLKKMGA 352
Query: 407 SIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 466
SIP +RPG++T+ +++ VL+R++ LG+VFL ++A P V+E T + FRGF TS+LIL
Sbjct: 353 SIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTFRGFGATSLLIL 412
Query: 467 VGCATDTARKVQAEIISQKYKNI 489
VG A DTA++VQ +ISQ+Y+ +
Sbjct: 413 VGVAIDTAKQVQTYVISQRYEGM 435
>gi|22297643|ref|NP_680890.1| preprotein translocase subunit SecY [Thermosynechococcus elongatus
BP-1]
gi|22293820|dbj|BAC07652.1| preprotein translocase SecY subunit [Thermosynechococcus elongatus
BP-1]
Length = 436
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/395 (44%), Positives = 267/395 (67%), Gaps = 6/395 (1%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLGIY+P+ G++R F N+ N+++ LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RLGIYLPIPGIDRAVFAQNVQDNAVIRFLDIFAGGGLSALGIFALGILPYINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR--PYVNDFSTDWVL 218
P L+ LQK EGEAGR+K+ Q TRY +VG+A++Q+ G +++ P W +
Sbjct: 99 TAALPSLERLQKDEGEAGRRKISQITRYVAVGWAVLQSFGIAIFVSSIPGAALHPGPWFV 158
Query: 219 TSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI 277
+ L LT GS +I E I++ +GNG SLLIF SI++YLPAS G+T+A A GN
Sbjct: 159 AEIVLGLTAGSMVVMWISELITERGVGNGASLLIFLSIVAYLPASVGQTIALAESGGNIG 218
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
G+A ++ F+ +++GIV+VQE R+IPI A R R ++++YLP ++N GVMPII
Sbjct: 219 GIAILVAVFLAMIVGIVFVQEGTRRIPIVSARRQVGRKLYREQTSYLPLRLNQGGVMPII 278
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDP 394
F+++ L LP TLA+FT + + A ++P G Y+ +LLI FF+Y+Y+ L ++P
Sbjct: 279 FASAVLILPSTLAQFTRSELVARFASYVSPAGPTPWLYVIFYLLLILFFSYFYSSLVVNP 338
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
D+S+ LK+ GASIP +RPGK+T+ +L+ VL+R++ LG++FL ++A P +E T +T
Sbjct: 339 VDMSQNLKKMGASIPGIRPGKATSDYLERVLNRLTFLGAIFLGLVAIIPTAVESATKVTT 398
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DT++++Q +ISQ+Y+ +
Sbjct: 399 FQGLGATSLLILVGVAIDTSKQIQTYVISQRYEGM 433
>gi|409991903|ref|ZP_11275127.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
gi|291567802|dbj|BAI90074.1| preprotein translocase SecY subunit [Arthrospira platensis NIES-39]
gi|409937233|gb|EKN78673.1| preprotein translocase subunit SecY [Arthrospira platensis str.
Paraca]
Length = 438
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 285/443 (64%), Gaps = 19/443 (4%)
Query: 56 TKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREA 115
REK+ +A+ M ++ L G+ L +G L L RLG+++P+ G++R+A
Sbjct: 3 VSREKTPTAQETFMQMAQAA---------GLRGRILVTIGLLILVRLGVFLPIPGIDRQA 53
Query: 116 FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
F N+ + LD FSGGG LGI +LGI+P+INA I+ QL+ P L+DLQK EG
Sbjct: 54 FSQNIQNTPFIGFLDLFSGGGFSALGIFALGILPYINASIIMQLMTAALPTLEDLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYV-NDFSTDWVLTSVTLLTL--GSAFTT 232
EAGR+K+ Q TRY ++G+AI+Q+IG +++ P+ N +++ + +L L GS F
Sbjct: 114 EAGRRKISQITRYVALGWAILQSIGIAIWVSPFAQNPNQPQFIVMAEVVLALAAGSMFVM 173
Query: 233 YIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII---SFILL 289
++ E I++ +GNG SLLIF +I++ LP S G T+ E Q G+ + ++I F+ +
Sbjct: 174 WVSELITERGIGNGASLLIFINIVAVLPQSLGSTI-ELAQSGDSAIVGRVVILLLIFLAM 232
Query: 290 VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
++GIV+VQE R+IPI A R R ++S+YLP ++N GVMPIIF+++ L LP ++
Sbjct: 233 IVGIVFVQEGTRRIPIVSARRQVGRKLYREKSSYLPLRLNQGGVMPIIFASAVLILPASI 292
Query: 350 ARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 406
++F L + + L+PGG Y+ +L+I FF+Y+Y L ++P D+++ LK+ GA
Sbjct: 293 SQFANNPILVQISTYLSPGGPAPWVYIAFYLLMILFFSYFYASLIMNPVDMAQNLKKMGA 352
Query: 407 SIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 466
SIP +RPG++T+ +++ VL+R++ LG+VFL ++A P V+E T + FRGF TS+LIL
Sbjct: 353 SIPGIRPGRATSEYIERVLNRLTFLGAVFLGLVAIIPTVVESATRVPTFRGFGATSLLIL 412
Query: 467 VGCATDTARKVQAEIISQKYKNI 489
VG A DTA++VQ +ISQ+Y+ +
Sbjct: 413 VGVAIDTAKQVQTYVISQRYEGM 435
>gi|428773989|ref|YP_007165777.1| protein translocase subunit SecY [Cyanobacterium stanieri PCC 7202]
gi|428688268|gb|AFZ48128.1| protein translocase subunit secY/sec61 alpha [Cyanobacterium
stanieri PCC 7202]
Length = 437
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 284/440 (64%), Gaps = 18/440 (4%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ +A+ M ++ L G+ L +G L + RLGIYIP+ G++REAF
Sbjct: 5 REKTPTAQETFMQMAQAA---------GLRGRLLITVGLLIVVRLGIYIPVPGIDREAFE 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
+ L LD F+GGG+ +GI +LGI+P+INA I+ QLL P L+DLQK EGEA
Sbjct: 56 AAVQNLPFLGFLDLFTGGGLATVGIFALGILPYINASIIIQLLTSAVPALEDLQKNEGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
GR+K+ Q TRY ++G+AI+QA G + LRPY S +++ +V +T GS F ++ E
Sbjct: 116 GRRKIAQITRYVALGWAIIQATGITIGLLRPYAISDSPIFIVETVLAITAGSMFVMWLSE 175
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA---TIIISFILLVLGI 293
I++ LGNG SLLIF +I++ LP + G T+ A Q G +A +I+ F+++++GI
Sbjct: 176 VITERGLGNGASLLIFVNIVAVLPRTLGNTIDYA-QTGGREAIAQVVLLILVFLVMIVGI 234
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+VQE R+IPI A R R +R++YLP ++N GVMPIIF+++ L LP ++A F
Sbjct: 235 VFVQEGTRRIPIISARRQVGRRLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSVAGFA 294
Query: 354 GIAA----LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
+ A+AL PG +Y+ LLI FF+Y+Y L +P+D+++ LK+ G+SIP
Sbjct: 295 DGTPFNTFINNVALALRPGSIWYVVVYSLLIVFFSYFYASLISNPEDIAQNLKKMGSSIP 354
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPGK+T A+++ VL+R+++LG++FL I+A P +E T +T F+GF TS+LILVG
Sbjct: 355 GIRPGKATVAYIEGVLNRLTLLGAIFLTIVATVPTFVESATGVTTFQGFGATSLLILVGV 414
Query: 470 ATDTARKVQAEIISQKYKNI 489
A DTA++VQ +ISQ+Y+ +
Sbjct: 415 AIDTAKQVQTYVISQRYEGM 434
>gi|119484814|ref|ZP_01619296.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
gi|119457632|gb|EAW38756.1| preprotein translocase SecY [Lyngbya sp. PCC 8106]
Length = 435
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/410 (42%), Positives = 270/410 (65%), Gaps = 7/410 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLG+++P+ G++R AF N+ + ++ LD F GGG+ LGI +L
Sbjct: 24 LRGRILVTIGLLILVRLGVFLPIPGIDRAAFSANIQNSPVIGFLDLFVGGGLSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QL+ P L+DLQK EGEAGR+K+ Q TRY + G++++Q+IG L++
Sbjct: 84 GILPFINASIIMQLMTAALPTLEDLQKNEGEAGRRKISQITRYVAFGWSVLQSIGLALWV 143
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P+ ++ V L+ G+ F ++ E I++ +GNG SLLIF +I++ LP S G
Sbjct: 144 SPFAESPGPLFMAEVVLALSAGAMFVMWVSELITERGIGNGASLLIFVNIVAVLPRSLGN 203
Query: 266 TVAEAFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+ E Q G+ + +II F+ +++GIV+VQE R+IPI A R R ++++
Sbjct: 204 TI-ELAQSGDRAIVGRVIILLLIFLAMIVGIVFVQEGTRRIPIVSARRQVGRKLYREKTS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N GVMPIIF+++ L LP +L++FT L + A AL+P G Y ++L
Sbjct: 263 YLPLRLNQGGVMPIIFASAVLILPASLSQFTNNPILVQIATALSPSGPTPWLYAAFYLVL 322
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L L P D+++ LK+ GASIP +RPG++T+ +++ VL+R++ LG++FL +
Sbjct: 323 ILFFSYFYASLILQPVDMAQNLKKMGASIPGIRPGRATSEYIERVLNRLTFLGAIFLGFV 382
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P V+E T + FRGF TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 AIIPTVVETATRVPTFRGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 432
>gi|300867116|ref|ZP_07111782.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
gi|300334871|emb|CBN56948.1| preprotein translocase subunit SecY [Oscillatoria sp. PCC 6506]
Length = 435
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 279/410 (68%), Gaps = 7/410 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLG+++P+ G++R AF N+ + L+ LD FSGGG+ LGI +L
Sbjct: 24 LRGRILVTIGLLILVRLGVHLPVPGIDRVAFAQNVQNSPLIGFLDLFSGGGLSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL P L++LQK EGEAGR+K+ Q TRY ++G+A++Q++G +++
Sbjct: 84 GILPYINASIIIQLLTAALPSLEELQKNEGEAGRRKISQITRYVALGWAVLQSVGIAIWV 143
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P+ + + ++ + LT GS F ++ E +++ +GNG SLLIF +I++ LP S G+
Sbjct: 144 SPFAQEPAPLFIAQTALALTAGSMFVMWVSELVTERGIGNGASLLIFINIVAVLPRSLGQ 203
Query: 266 TVAEAFQDGN--YIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
TV E Q GN +G + +++ F+++++GIV+VQE R+IPI A R R ++S+
Sbjct: 204 TV-ELAQSGNSQIVGQVIVLLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKVYREKSS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N GVMPIIF+++ L LP +L +FT L + A ALNP GS Y ++L
Sbjct: 263 YLPLRLNQGGVMPIIFASAVLILPASLGQFTNNPILVQVANALNPNGSMPWLYALVYLVL 322
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L ++P D+S+ LK+ GASIP +RPG+ T+ +++ VL+R++ LG++FL ++
Sbjct: 323 ILFFSYFYASLIVNPVDMSQNLKKMGASIPGIRPGQKTSEYVERVLNRLTFLGAIFLGLV 382
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P +E T++T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 383 AIVPTAVESATNVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 432
>gi|428768903|ref|YP_007160693.1| protein translocase subunit SecY [Cyanobacterium aponinum PCC
10605]
gi|428683182|gb|AFZ52649.1| protein translocase subunit secY/sec61 alpha [Cyanobacterium
aponinum PCC 10605]
Length = 437
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 267/397 (67%), Gaps = 9/397 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLGIYIP+ G++R+AF + L LD F+GGG+ +GI +LGI+P+INA I+ QL+
Sbjct: 39 RLGIYIPVPGIDRDAFAAAIQNLPFLGFLDIFTGGGLSTIGIFALGILPYINASIIMQLM 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLT 219
P L+DLQK EGE GR+K+ Q TRY ++G+AI+Q+ G V LRPY + S +V+
Sbjct: 99 TSAVPALEDLQKNEGEMGRRKIAQITRYVALGWAIIQSTGVTVGLLRPYALNDSPWFVVE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V +T GS F +I E I++ LGNG SLLIF +I++ LP + T+ A Q G +
Sbjct: 159 TVLAITAGSMFVMWISEVITERGLGNGASLLIFVNIVAVLPQTLANTIDYA-QTGGRQAI 217
Query: 280 ATI---IISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A + ++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 218 AQVTILVLVFLVMIVGIVFVQEGTRRIPIISARRQVGRRLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
IF+++ L LP +++ F A + + A+AL PG +Y+ +LI FF+Y+Y L
Sbjct: 278 IFASAVLVLPSSVSGFAENTAFSGVVNQVALALRPGSIWYVVVYSVLILFFSYFYASLVS 337
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P+D+++ LK+ G SIP +RPGK+T A+L+ VL+R+++LG++FL ++A P +E+ T +
Sbjct: 338 NPEDIAQNLKKMGTSIPGIRPGKATVAYLEGVLNRLTLLGAIFLTVVATVPTFVERATGV 397
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T F+GF TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 398 TTFQGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 434
>gi|428213124|ref|YP_007086268.1| protein translocase subunit SecY [Oscillatoria acuminata PCC 6304]
gi|428001505|gb|AFY82348.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
acuminata PCC 6304]
Length = 421
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 275/414 (66%), Gaps = 14/414 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLGI+IP+ G++ E F N+D + L+ LD FSGGG+ LGI +L
Sbjct: 9 LRGRLLLTIGMLVLVRLGIWIPVPGIDLERFQANIDGSPLIGFLDLFSGGGLRALGIFAL 68
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL P L+DLQK EGEAGR+K+ QYTR+ ++G+A++Q+IG +++
Sbjct: 69 GIIPYINASIIMQLLTAALPTLEDLQKNEGEAGRRKISQYTRFVALGWALLQSIGISIWV 128
Query: 206 RPYVN--DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ D + + + LT GS F ++ E I++ +GNG SLLIF +I++ LP S
Sbjct: 129 GAFAETPDPGFLFYVQTAVALTTGSMFVMWVSELITERGVGNGASLLIFVNIVAVLPNSL 188
Query: 264 GRTVAEAFQDGNYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G+T A+A +D +G + +++ F++ ++GIV+VQE R+IPI A R R ++S+
Sbjct: 189 GQTFAQAREDNTIVGPVLILMLIFLITIVGIVFVQEGTRRIPIISARRQVGRKLYREKSS 248
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGG-------SFYLPT 375
YLP ++N GVMPIIF+++ L LP +LA+FT L + L+P G +FYL
Sbjct: 249 YLPLRLNQGGVMPIIFASAVLILPASLAQFTQNNWLITISSYLSPSGRAPFVYAAFYLT- 307
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF+Y+Y L ++P D+++ LK+ GASIP +RPG++T +++ VL+R++ LG++F
Sbjct: 308 ---LILFFSYFYASLIVNPVDMAQNLKKMGASIPGIRPGRATTEYVERVLNRLTFLGAIF 364
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L ++A P +E T + F+GF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 365 LGMVAIVPTAVESATGVRTFQGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 418
>gi|411119499|ref|ZP_11391879.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
gi|410711362|gb|EKQ68869.1| protein translocase subunit secY/sec61 alpha [Oscillatoriales
cyanobacterium JSC-12]
Length = 465
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 290/470 (61%), Gaps = 46/470 (9%)
Query: 56 TKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREA 115
R+K+ SA+ A M ++ L G+ L +G L L RLGI++P+ ++R+A
Sbjct: 3 VNRDKTPSAQETFAQMAQAA---------GLRGRVLLTVGMLILVRLGIFLPIPDIDRQA 53
Query: 116 FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
F ++ N ++S LD F+GGG+ LGI +LGI+P+INA I+ QLL P L++LQK EG
Sbjct: 54 FAQSVQNNPVISFLDIFAGGGLSALGIFALGILPYINASIILQLLTAALPSLENLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIG----------------QVLYLRPYVNDFS------ 213
EAGR+K+ Q TRY ++G+A+VQ++G QVL R FS
Sbjct: 114 EAGRRKISQITRYVALGWAVVQSVGLAWWVVNSGAAQIDGQQVLVQRAANGSFSFVTENG 173
Query: 214 --------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
++ ++ LT GS +IGE +++ +GNG SLLI SI+S LP S G+
Sbjct: 174 ASIGFGSLVPFIASTALALTAGSMLVMWIGELVTERGIGNGASLLIVVSIVSGLPRSLGQ 233
Query: 266 TVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+ E Q G+ G+ +++ F+++++GIV+VQE R+IPI A R R L+RS+
Sbjct: 234 TL-ELAQTGDRSLVGGIIILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKTYLERSS 292
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N SGVMPIIF+++ L LP +A FT L + A L+P G Y+ +LL
Sbjct: 293 YLPLRLNQSGVMPIIFASAVLFLPVYIAEFTKNPLLSQVASYLSPSGPTPWLYITFYLLL 352
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y++T L ++P D+S+ LK+ GASIP +RPGK+T+ +++ VL+R++ LG++FL ++
Sbjct: 353 ILFFSYFWTSLVINPVDLSQNLKKMGASIPGIRPGKATSDYIERVLNRLTFLGAIFLGLV 412
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P +E T + FRGF TS+LI+VG A DTA+++Q +ISQ+Y+ +
Sbjct: 413 AIVPTAVESATRVETFRGFGATSLLIVVGVAIDTAKQIQTYVISQRYEGM 462
>gi|434388551|ref|YP_007099162.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
gi|428019541|gb|AFY95635.1| preprotein translocase, SecY subunit [Chamaesiphon minutus PCC
6605]
Length = 447
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 276/448 (61%), Gaps = 25/448 (5%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ SA+ M ++ L G+ L LG L L+R G ++P+ G++R AF
Sbjct: 5 REKAPSAQETFVQMAQAA---------GLRGRILVTLGLLILARFGTFVPIPGIDRVAFA 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
++ + + LD FSGG +G+ +LGI+P+INA I+ QLL P L+ LQK EGEA
Sbjct: 56 ESIKNSPTIGFLDIFSGGAFSTVGVFALGIIPYINASIIIQLLTTALPALEKLQKEEGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVLYLRPYV--NDFSTDWVLTSVTLLTLGSAFTTYIG 235
GR+K+ Q TRY +VG+ I +IG L+L+ Y +T +V+++V LT GS F +I
Sbjct: 116 GRRKISQITRYVAVGWGIAYSIGIALWLQKYALPGHQTTFFVVSTVMALTAGSMFVMWIS 175
Query: 236 ERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII--SFILLVLGI 293
E I++ +GNG SLLIF +I++ LP S G T+ A + I T+ + FIL+ +GI
Sbjct: 176 ELITERGIGNGASLLIFLNIVAVLPKSLGDTIDLAQSGDSSILTRTVALLAVFILMTVGI 235
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+VQE R+IPI A R R +R++YLP ++N GVMPIIF++S L LP LA F
Sbjct: 236 VFVQEGTRRIPIISARRQVGRRIQRERTSYLPLRLNQGGVMPIIFASSVLVLPSALASFA 295
Query: 354 GI------------AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 401
G A+ AA L PG ++ ++LI FF+Y+Y+ L ++P D+++ L
Sbjct: 296 GKNVGADGNLDAISQAVINAANFLAPGTPAHVAFYVVLIVFFSYFYSSLVVNPVDMAQNL 355
Query: 402 KRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGT 461
K+ GASIP +RPG +T+ +++ +L+R+++LG++FL I+A P IE ++ FRGF T
Sbjct: 356 KKMGASIPGIRPGVATSKYIEGILARLTLLGAIFLGIVATVPTAIESALGVSTFRGFGAT 415
Query: 462 SVLILVGCATDTARKVQAEIISQKYKNI 489
S+LILV A DTA++VQ +ISQ+Y+ +
Sbjct: 416 SLLILVSVAIDTAKQVQTLVISQRYEGM 443
>gi|220906737|ref|YP_002482048.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7425]
gi|219863348|gb|ACL43687.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7425]
Length = 436
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 266/410 (64%), Gaps = 6/410 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLGIY+P+ G++R+ F + N ++ LD FSGGG+ LGI +L
Sbjct: 24 LRGRLLVTIGLLILVRLGIYLPVPGIDRQVFAQTIQNNPVIGFLDIFSGGGLSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL P L+ LQK EGEAGR+K+ Q TRY ++ +AI+Q+ G +++
Sbjct: 84 GILPYINASIILQLLTAALPSLERLQKDEGEAGRRKISQITRYVALVWAIIQSTGIAIWV 143
Query: 206 RPY---VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + ++ V LT GS F ++ E I++ +GNG SLLIF SI++YLP S
Sbjct: 144 SSTPGAVFNPGPIFIGEMVLALTAGSMFVMWVSELITERGVGNGASLLIFLSIVAYLPTS 203
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+T+ A G+ G+ + + F+ +++GIV+VQE R+IPI A R R ++++
Sbjct: 204 INQTIELAQSGGSVGGVVILALVFLAMIVGIVFVQEGTRRIPIISARRQVGRRLYREQTS 263
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N GVMPIIF+++ L LP LA FT + + A + P G Y+ ++L
Sbjct: 264 YLPLRLNQGGVMPIIFASAVLVLPSYLAGFTKNETVAQIANYITPNGPTPWLYVLFYLVL 323
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L ++P D+++ LK+ GASIP +RPG++T+ +++ VL+R++ LG++FL +
Sbjct: 324 ILFFSYFYASLVVNPVDMAQNLKKMGASIPGIRPGRATSEYVEGVLNRLTFLGAIFLGAV 383
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P +E T +T FRGF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 384 AIIPTAVESATRVTTFRGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 433
>gi|428314351|ref|YP_007125328.1| protein translocase subunit SecY [Microcoleus sp. PCC 7113]
gi|428255963|gb|AFZ21922.1| protein translocase subunit secY/sec61 alpha [Microcoleus sp. PCC
7113]
Length = 448
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 277/422 (65%), Gaps = 18/422 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L ++R+GI++PL G++R F ++ NS+L LD FSGGGI +GI +L
Sbjct: 24 LRGRLLVTIGLLIVARMGIFLPLPGIDRARFSADIQNNSVLGFLDIFSGGGISAVGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-Y 204
GI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY + G+A++Q++G
Sbjct: 84 GILPFINASIILQLLTAAIPSLENLQKNEGEAGRRKISQLTRYVAAGWAVIQSVGITAGL 143
Query: 205 LRPYVNDFSTDWVLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
LRPY D + L LT GS F ++ E +++ +GNG SLLIF +I++ LP +
Sbjct: 144 LRPYALDGGGPLFIAETALALTAGSMFVMWLSELVTERGIGNGASLLIFVNIVAVLPKTL 203
Query: 264 GRTVAEAFQDG-NYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T+ A G +G + +++ F+++++GIV+VQE R+IPI A R R +R+
Sbjct: 204 GQTIELAQTGGRETVGKVVILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRRLYRERT 263
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-----------LKKAAVALNPGGS 370
+YLP ++N GVMPIIF+++ L LP +LA+FTG +A L + + L+P G
Sbjct: 264 SYLPLRLNQGGVMPIIFASAVLILPASLAQFTGGSANKGFFAQVHQGLVQVSNYLSPNGP 323
Query: 371 ---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
Y+ ++LI FF+Y+Y L ++P D+++ LK+ GASIP +RPG++T+ +++ VL+R
Sbjct: 324 TPWLYVLVYLVLIVFFSYFYASLIVNPVDMAQNLKKMGASIPGIRPGRTTSEYVERVLNR 383
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ LG++FL ++A P +E T +T F+G TS+LILVG A DTA+++Q +ISQ+Y+
Sbjct: 384 LTFLGAIFLGLVAVVPTAVESATGVTTFKGLGATSLLILVGVAIDTAKQIQTYVISQRYE 443
Query: 488 NI 489
+
Sbjct: 444 GM 445
>gi|284929579|ref|YP_003422101.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
gi|284810023|gb|ADB95720.1| protein translocase subunit secY/sec61 alpha [cyanobacterium
UCYN-A]
Length = 438
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 259/398 (65%), Gaps = 10/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++RE F+ + + +L LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 39 RFGIFIPIPGIDREKFISAISNSPVLGFLDIFTGGGISTLGIFALGILPFINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ Q TRY + G+A++Q+ V LR Y + +V
Sbjct: 99 TAAIPSLEDLQKNEGEAGRRKISQITRYVAAGWAVIQSTAITVGLLREYALSDTFWFVPE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+T+ A Q G +
Sbjct: 159 TVLALTAGSMFVMWVSELITERGIGNGASLLIFVNIVASLPRTLGQTIDYA-QTGGRQAV 217
Query: 280 ATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A +II F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 218 AQVIILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP +L F G L K AL PG Y+ +LI FF+Y+Y L
Sbjct: 278 IFASAVLILPQSLIGFLGSGGVVTETLIKVTNALRPGTWTYVGVYSILILFFSYFYASLI 337
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+D+S+ LK+ G+SIP +RPG+ T +L+ VL+R++ LG+ FL+ +A P ++E T
Sbjct: 338 VNPEDISKNLKKMGSSIPGIRPGQKTKEYLEGVLNRLTFLGAGFLSFVATVPTLVEGATG 397
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|86610046|ref|YP_478808.1| preprotein translocase subunit SecY [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558588|gb|ABD03545.1| preprotein translocase, SecY subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 432
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 166/389 (42%), Positives = 260/389 (66%), Gaps = 2/389 (0%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
GIYIP+ ++R F + + LD FSGGGI LGI +LGI+PFINA I+ QLL
Sbjct: 41 GIYIPIPSIDRARFAAEAANSPVFGLLDVFSGGGISALGIFALGILPFINASIIMQLLVS 100
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
P L++LQK EGE GR+++ QYTRY ++ +AI+Q IG ++R + + + + S T
Sbjct: 101 AIPALENLQKNEGEQGRRQISQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTT 160
Query: 223 L-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT 281
L L GS F ++GE I++ +G+G SLLIF +I++ LP + G+T++ A D + IG
Sbjct: 161 LALAAGSLFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGIL 220
Query: 282 IIIS-FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFST 340
++++ F++ ++GIV+VQE RKIPI YA R ++ +YLP ++N GVMPIIF+
Sbjct: 221 LLLAIFLVTIVGIVFVQEGSRKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAY 280
Query: 341 SSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQ 400
S ++LP LA++T L + A L+P FY+P +LI FF+Y+Y L ++P D+++
Sbjct: 281 SVMSLPLALAQYTQNLTLVQVANFLSPTSWFYIPFYFVLILFFSYFYASLLINPVDLAQN 340
Query: 401 LKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAG 460
LK+ GASIP VRPGK+TA +++ +L+R+++LG++FL +A P +E+ T +T F+G
Sbjct: 341 LKKMGASIPGVRPGKATAEYVEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA 400
Query: 461 TSVLILVGCATDTARKVQAEIISQKYKNI 489
TS+LILVG A +T++++Q +ISQ+Y+ +
Sbjct: 401 TSLLILVGVAIETSKQIQTYVISQRYEGM 429
>gi|428305853|ref|YP_007142678.1| protein translocase subunit SecY [Crinalium epipsammum PCC 9333]
gi|428247388|gb|AFZ13168.1| protein translocase subunit secY/sec61 alpha [Crinalium epipsammum
PCC 9333]
Length = 447
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 273/422 (64%), Gaps = 19/422 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLG++IP+ G++R F ++ + ++ LD FSGGGI +GI +L
Sbjct: 24 LRGRLLVTIGLLILVRLGVHIPIPGIDRARFAQDIQNSPVIGFLDIFSGGGISAVGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL P L++LQK EGEAGR+K+ Q TR S+ +A+VQ+IG L++
Sbjct: 84 GILPYINASIILQLLTAALPYLENLQKNEGEAGRRKISQITRIVSLVWALVQSIGISLWV 143
Query: 206 RPYVN-DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ Y +V + LT GS F ++ E +++ +GNG SLLIF +I+S LP S G
Sbjct: 144 QRYATGSGGLIFVAQTALALTAGSMFVMWVSELVTERGIGNGASLLIFINIVSVLPRSLG 203
Query: 265 RTVAEAFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
+T+ E Q G+ L +II F+++++GIV+VQE R+IPI A R R +R+
Sbjct: 204 QTL-ELAQTGDREILGRVIILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRRLYRERT 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-----------LKKAAVALNPGGS 370
+YLP ++N GVMPIIF+++ L LP +LA+FT +A +AA L+P G
Sbjct: 263 SYLPLRLNQGGVMPIIFASAVLVLPASLAQFTQNSANNPFLGGLHQFFNQAANYLSPTGQ 322
Query: 371 ---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
Y+ + LI FF+Y+Y L ++P D+S+ LK+ GASIP VRPG +T+ +++ VL+R
Sbjct: 323 TPWLYVAFYVFLIVFFSYFYASLIINPVDMSQNLKKMGASIPGVRPGTTTSDYIERVLNR 382
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++LG++FL ++A P +E T +T F+G TS+LI+VG A DTA+++Q +ISQ+Y+
Sbjct: 383 LTLLGAIFLGLVAIVPTAVESTIGVTTFKGLGATSLLIIVGVAIDTAKQIQTYVISQRYE 442
Query: 488 NI 489
+
Sbjct: 443 GM 444
>gi|443321121|ref|ZP_21050185.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
73106]
gi|442789149|gb|ELR98818.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
73106]
Length = 438
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/397 (44%), Positives = 260/397 (65%), Gaps = 8/397 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLGI+IP+ G++R F + L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RLGIFIPIPGIDRLKFAEAIQTVPGLGFLDIFTGGGLSALGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
L+DLQK EGEAGR+K+ Q TRY ++ +AI Q+ L LRPY D +V+
Sbjct: 99 TAAIKPLEDLQKNEGEAGRRKISQVTRYVALVWAIAQSTAITLGLLRPYALDPGIWFVVE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--YI 277
+ T LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+T+ A Q G
Sbjct: 159 TATALTAGSMFVMWVSELITERGIGNGASLLIFVNIVAILPKTLGQTIQFAQQGGQETIA 218
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ ++I F+++++GIV++QE R+IPI A R R +R++YLP ++N SGVMPII
Sbjct: 219 QVVILLIVFLVMIVGIVFIQEGTRRIPIISAKRQVGRRLYRERTSYLPLRLNQSGVMPII 278
Query: 338 FSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
F+++ L +P +LA F L+ A+ + PGG Y+ + LI FF+Y+YT L
Sbjct: 279 FASALLIVPSSLAGFFRGEGPISQVLQNLALWVQPGGWGYIVFYLALILFFSYFYTSLIS 338
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P D+S+ LK+ GASIP +RPGK+T+ +L+ VL+R++ LG+ FL I+A P ++E T +
Sbjct: 339 NPVDMSQNLKKMGASIPGIRPGKATSDYLEGVLNRLTFLGAAFLGIVATVPTLVESATGV 398
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T FRGF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 TTFRGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|428205249|ref|YP_007089602.1| protein translocase subunit SecY [Chroococcidiopsis thermalis PCC
7203]
gi|428007170|gb|AFY85733.1| protein translocase subunit secY/sec61 alpha [Chroococcidiopsis
thermalis PCC 7203]
Length = 435
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 276/411 (67%), Gaps = 7/411 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L+RLG+++P+ G+NRE F ++ NS ++ LD FSGGG+ LG+ +
Sbjct: 23 LRGRLLVTIGMLILARLGVFLPVPGINREQFAQSVQNNSAVIGFLDIFSGGGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA-IGQVL 203
LGI+P+INA I+ QLL P L++LQK EGEAGR+++ Q TRY ++G+AI+Q+ +
Sbjct: 83 LGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRQISQVTRYVALGWAILQSTFIAAI 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
++RP+ + +V+ + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 WIRPFALNPGPVFVIETAIALTAGSMFVMWASELITERGVGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDG-NYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ A G IG + +++ F+++++GIV+VQE R+IPI A R R L+RS
Sbjct: 203 GDTITLAQTGGRETIGRVIVLLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKLYLERS 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNIL 378
+YLP ++N GVMPIIF+++ L LP +LARFT + + A++PGGS Y +
Sbjct: 263 SYLPLRLNQGGVMPIIFASAVLILPASLARFTQNEYVINISNAISPGGSTPWLYALVYFV 322
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
+I FF+Y+Y+ L ++P D+++ LK+ G+SIP +RPGK+T+ +++ VL+R++ LG+VFL
Sbjct: 323 MIVFFSYFYSTLIVNPVDLAQNLKKMGSSIPGIRPGKATSEYVERVLNRLTFLGAVFLGA 382
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P +E T + F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 383 VAIIPTAVESATRVPTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 433
>gi|37520962|ref|NP_924339.1| preprotein translocase subunit SecY [Gloeobacter violaceus PCC
7421]
gi|35211957|dbj|BAC89334.1| preprotein translocase subunit [Gloeobacter violaceus PCC 7421]
Length = 433
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 266/398 (66%), Gaps = 13/398 (3%)
Query: 100 SRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
SR+GIYIPL +N+ AF N+++ L+ F+GGG LG+ LGI+P+INA I+ QL
Sbjct: 38 SRIGIYIPLPEINQAAFQQATQNNAIIGFLNIFAGGGFTTLGVFMLGILPYINASIIMQL 97
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLT 219
L + PKL+DLQK EGE GR+++ QYTRY ++G+AI+Q+IG +Y++P+V D+S +V+
Sbjct: 98 LVPVFPKLEDLQKNEGEQGRRQIAQYTRYLALGWAIIQSIGVAIYIKPFVADWSPLFVIQ 157
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI-G 278
+ LT G+ F ++GE I++ +GNG SLLIF SI+S LP +F +T D + + G
Sbjct: 158 TTLALTAGAIFVMWLGELITEKGIGNGASLLIFVSIVSSLPTAFSQTFQLLQADSSRVAG 217
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR-------SAYLPFKVNSS 331
+ +++ F+ +++GIV+VQE R+IPI A R G +R ++YLP +VN
Sbjct: 218 VVVLLLVFLAMIVGIVFVQEGTRRIPIISARRQV----GPRRQQYQQQQTSYLPLRVNQG 273
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
GVMPIIF++S L LP T A+F A + + A++ G + ++LI FF+++Y L
Sbjct: 274 GVMPIIFASSLLYLPLTFAQFARNATVDQVVNAISSGWIHNI-LYLVLILFFSFFYATLI 332
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+DVS+ LKR G+SIP VRPG +T+ ++ V++R++ LG++FL+ +A P +EQ T
Sbjct: 333 INPEDVSKNLKRMGSSIPGVRPGTATSEYIAKVMNRLTFLGAIFLSAVAIIPTFVEQGTG 392
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T F G TS+LILVG A DT R++Q +ISQ+Y+ +
Sbjct: 393 ITTFNGLGATSLLILVGVAIDTVRQIQTYVISQRYEGM 430
>gi|254421758|ref|ZP_05035476.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
gi|196189247|gb|EDX84211.1| preprotein translocase, SecY subunit [Synechococcus sp. PCC 7335]
Length = 437
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/413 (42%), Positives = 260/413 (62%), Gaps = 11/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST----LDSFSGGGIGRLG 141
L + L +G L L RLGIYIP+ G++R AF N Q LD GGG+ +G
Sbjct: 24 LRSRLLVTIGLLVLVRLGIYIPVPGIDRAAF-SNFVQGGGAGGVLGFLDIIGGGGLSLVG 82
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA-IG 200
I +LGI+PFINA I+ QLL P L+DLQK EGEAGR+K+ Q TRY + G+ IVQ+ +
Sbjct: 83 IFALGILPFINASIIMQLLTAAIPALEDLQKNEGEAGRRKISQVTRYVAFGWTIVQSTML 142
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
LR + DF +V+ +V LT GS F ++GE I++ LGNG SLLIF +I+S LP
Sbjct: 143 SCFLLRDFAYDFGVPFVIETVIALTAGSMFVMWVGELITERGLGNGASLLIFLNIVSSLP 202
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASRYTSRSGG 317
G TV A Q G+ + I+I F++ + +GIV+VQE R+IPI A R R
Sbjct: 203 RVLGETVDLA-QTGDRSTIGGIVILFLVFIATIIGIVFVQEGTRRIPIVSARRQVGRKLY 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYLPTN 376
L++S YLP ++N GVMPIIF++S L +P +L ++ A + A Y+
Sbjct: 262 LEKSNYLPLRLNQGGVMPIIFASSMLIIPISLVQYIPSEAFARFMNANFRATSPLYILVY 321
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+++I FF+Y+Y L ++P+D+S LK+ GASIP +RPG++T ++ VL+R++ LG++FL
Sbjct: 322 LVMIVFFSYFYASLVVNPEDMSRNLKKMGASIPGIRPGRATTNYISKVLNRLTFLGAIFL 381
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P+++E T + F+GF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 382 GLVAVVPSLVESATRVQTFQGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|86605848|ref|YP_474611.1| preprotein translocase subunit SecY [Synechococcus sp. JA-3-3Ab]
gi|86554390|gb|ABC99348.1| preprotein translocase, SecY subunit [Synechococcus sp. JA-3-3Ab]
Length = 432
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 256/388 (65%), Gaps = 2/388 (0%)
Query: 104 IYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQI 163
IYIP+ ++R F + + LD FSGGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPIPSIDRARFAAEAANSPVFGFLDVFSGGGISALGIFALGILPFINASIIMQLLVSA 101
Query: 164 NPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTL 223
P L++LQK EGE GR+++ QYTRY ++ +AI+Q IG ++R + N + + S TL
Sbjct: 102 IPALENLQKNEGEQGRRQISQYTRYVTLIWAIIQGIGISFWVREFANTSNELAFVASTTL 161
Query: 224 -LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG-LAT 281
LT GS F ++GE I++ +G+G SLLIF +I++ LP + G+T++ A D + IG +
Sbjct: 162 ALTAGSMFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILV 221
Query: 282 IIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTS 341
++ F+ ++GIV+VQE RKIPI YA R ++ +YLP ++N GVMPIIF+ S
Sbjct: 222 LMAVFLATIVGIVFVQEGSRKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYS 281
Query: 342 SLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 401
++LP LA++T L + A L P FY+P +LI F+Y+Y L ++P D+++ L
Sbjct: 282 VMSLPFALAQYTQNLTLVQVANLLAPTSWFYIPFYFVLILLFSYFYASLIINPVDLAQNL 341
Query: 402 KRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGT 461
K+ GASIP VRPGK+TA +++ +L+R+++LG++FL +A P +E+ T +T F+G T
Sbjct: 342 KKMGASIPGVRPGKATAEYIEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGAT 401
Query: 462 SVLILVGCATDTARKVQAEIISQKYKNI 489
S+LILVG A +T++++Q +ISQ+Y+ +
Sbjct: 402 SLLILVGVAIETSKQIQTYVISQRYEGM 429
>gi|158337828|ref|YP_001519004.1| preprotein translocase subunit SecY [Acaryochloris marina
MBIC11017]
gi|359457962|ref|ZP_09246525.1| preprotein translocase subunit SecY [Acaryochloris sp. CCMEE 5410]
gi|158308069|gb|ABW29686.1| preprotein translocase, SecY subunit [Acaryochloris marina
MBIC11017]
Length = 435
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/410 (43%), Positives = 259/410 (63%), Gaps = 7/410 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ LG L L RLGI +P+ G+NR AF N + LD FSGGG LGI +L
Sbjct: 24 LRGRVFITLGLLILVRLGIRLPVPGINRAAFTSTFAGNPVFGFLDFFSGGGFSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QLL P L+ LQK EGEAGR+K+ Q TRY ++G+AI+Q+ G + +
Sbjct: 84 GIIPFINASIILQLLTAALPSLERLQKDEGEAGRRKISQITRYVALGWAIIQSTGFAILI 143
Query: 206 RP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + +++ V LT GS F ++GE I++ +GNG SLLIF SI+S LP++
Sbjct: 144 NSAEGVVFNPGIVFIVQMVVALTAGSMFVMWVGELITERGVGNGASLLIFLSIVSGLPST 203
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G + A + G + +I FIL+++GIV+VQE R+IPI YA R R ++ +
Sbjct: 204 LGNALQIA-EQGEVSKVIILISVFILMIVGIVFVQEGTRRIPIVYARRQVGRRTYQEQKS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF---YLPTNILL 379
YLP ++NS GVMPIIF+++ L LPGTLA T A + + A L+P S Y+ + +
Sbjct: 263 YLPLRLNSGGVMPIIFASAMLILPGTLAGLTNNATIIEFAGYLSPNSSLPWVYVIFYLSM 322
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L ++P D+S+ LK+ GASIP +RPG++T +++ VL+R+++LG+ FL +
Sbjct: 323 IVFFSYFYASLVVNPIDMSQNLKKMGASIPGIRPGRATTEYVEKVLNRLTLLGAFFLGAV 382
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P E+ F GF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 383 VLVPVAAERVVGGGIFSGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 432
>gi|126658007|ref|ZP_01729159.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
gi|126620645|gb|EAZ91362.1| protein translocase subunit SecY [Cyanothece sp. CCY0110]
Length = 438
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 261/398 (65%), Gaps = 10/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++R FV + N +L LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 39 RFGIFIPIPGIDRAKFVSAISNNQVLGFLDIFTGGGISTLGIFALGILPFINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ Q TRY + G+A++Q+ V LR Y + +V
Sbjct: 99 TAAIPSLEDLQKNEGEAGRRKISQITRYVAAGWAVIQSTAITVGLLREYALTDTIWFVPE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+T+ A Q G +
Sbjct: 159 TVLALTAGSMFVMWVSELITERGIGNGASLLIFVNIVASLPRTLGQTIDYA-QTGGRQAV 217
Query: 280 A---TIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 218 AQVVILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP +LA F G L + A AL PG Y+ LLI FF+Y+Y L
Sbjct: 278 IFASAVLILPQSLAGFFGDEGAFSQVLIQVANALRPGTWVYVGVYSLLILFFSYFYASLI 337
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+DVS+ LK+ G+SIP +RPG+ T +L+ VL+R++ LG++FL+ +A P ++E T
Sbjct: 338 VNPEDVSKNLKKMGSSIPGIRPGEKTKEYLEGVLNRLTFLGAIFLSFVATVPTLVEGATG 397
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|378787335|gb|AFC39966.1| preprotein translocase subunit SecY [Porphyra umbilicalis]
Length = 411
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 267/407 (65%), Gaps = 1/407 (0%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI
Sbjct: 4 KSDLRNRIVFTLFLLILARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGI 63
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+IN+ IV QLL +I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+
Sbjct: 64 FALGIVPYINSSIVMQLLTKIIPTLEKLQKEEGELGRQKITQITRYLALGWATLQSSAIS 123
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++++PYV +++ +V S+ LT GS ++ E I++ +GNG SLLIF +I+S LP +
Sbjct: 124 IWVKPYVFNWNFAFVCESILALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKN 183
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
F ++ +A + I I+ F+L+++ ++VQE R+I I ++R +S L ++
Sbjct: 184 FTQSFFDANYNNTSIKFGLFIVIFLLMIIITIFVQEGTRRIKI-ISARQLGKSSILDPNS 242
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLP K+N GVMPI+F+++S+ALP L + T + + P GS YL LI F
Sbjct: 243 YLPLKLNQGGVMPIVFASASMALPAYLTQLTQNPLVLQILYLFCPNGSLYLVLYSALILF 302
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F+Y+YT + ++P+D++ LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A
Sbjct: 303 FSYFYTSIVMNPEDIATNLKKMGASIPNIRPGQATIDYLQVILNRLTFLGATFLFTVALI 362
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +IE+ + RG TS+LILVG A DTA+++Q +IS+KY ++
Sbjct: 363 PFIIEKVAQIQNLRGLGATSLLILVGVAIDTAKQIQTYVISKKYDSM 409
>gi|172038946|ref|YP_001805447.1| preprotein translocase subunit SecY [Cyanothece sp. ATCC 51142]
gi|354552765|ref|ZP_08972073.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
gi|171700400|gb|ACB53381.1| preprotein translocase SecY subunit [Cyanothece sp. ATCC 51142]
gi|353556087|gb|EHC25475.1| preprotein translocase, SecY subunit [Cyanothece sp. ATCC 51472]
Length = 438
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/441 (42%), Positives = 279/441 (63%), Gaps = 19/441 (4%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ +A+ M ++ L G+ L +G L L R GI+IP+ G++R FV
Sbjct: 5 REKTPTAQETFLQMAQAA---------GLRGRLLITIGLLILIRFGIFIPIPGIDRAKFV 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
+ N +L LD F+GGGI LGI +LGI+PFINA I+ QLL P L+DLQK EGEA
Sbjct: 56 SAISNNQVLGFLDIFTGGGISTLGIFALGILPFINASIIMQLLTAAIPSLEDLQKNEGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
GR+K+ Q TRY + G+A++Q+ V LR Y + +V +V LT GS F ++ E
Sbjct: 116 GRRKISQITRYVAAGWAVIQSTAITVGLLREYALTDTIWFVPETVLALTAGSMFVMWVSE 175
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA---TIIISFILLVLGI 293
I++ +GNG SLLIF +I++ LP + G+T+ A Q G +A +++ F+++++GI
Sbjct: 176 LITERGIGNGASLLIFVNIVASLPRTLGQTIDYA-QTGGRQAVAQVVILLLVFLVMIVGI 234
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+VQE R+IPI A R R +R++YLP ++N GVMPIIF+++ L LP +LA F
Sbjct: 235 VFVQEGTRRIPIISARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLILPQSLAGFF 294
Query: 354 GIAA-----LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
G L + A AL PG Y+ LLI FF+Y+Y L ++P+DVS+ LK+ G+SI
Sbjct: 295 GDEGQFSQILIQVANALRPGTWVYVGVYSLLILFFSYFYASLIVNPEDVSKNLKKMGSSI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ T +L+ VL+R++ LG++FL+ +A P ++E T +T FRG TS+LILVG
Sbjct: 355 PGIRPGEKTKEYLEGVLNRLTFLGAIFLSFVATVPTLVEGATGVTTFRGLGATSLLILVG 414
Query: 469 CATDTARKVQAEIISQKYKNI 489
A DTA+++Q +ISQ+Y+ +
Sbjct: 415 VAIDTAKQIQTYVISQRYEGM 435
>gi|428224253|ref|YP_007108350.1| protein translocase subunit SecY [Geitlerinema sp. PCC 7407]
gi|427984154|gb|AFY65298.1| protein translocase subunit secY/sec61 alpha [Geitlerinema sp. PCC
7407]
Length = 441
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 265/401 (66%), Gaps = 13/401 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS---LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVF 157
RLGI++P+ G++R AF +L N+ ++ LD F GGG+ LGI +LGI+P+INA I+
Sbjct: 39 RLGIFLPVPGIDRAAFSADLQNNNFGGVIGFLDVFVGGGLSTLGIFALGILPYINASIIL 98
Query: 158 QLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDW 216
QLL P L+DLQK EGEAGR+K+ Q TRY ++G+A++Q+ G L Y + +
Sbjct: 99 QLLTAALPALEDLQKNEGEAGRRKISQITRYVALGWAVLQSFGLSAFLLSRYAENPGPIF 158
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
V SV L GS F ++GE I++ +GNG SLLIF +I+S LP S G+T+ E Q G+
Sbjct: 159 VAESVIALCAGSMFVMWVGELITEQGVGNGASLLIFLNIVSSLPRSLGQTI-ELAQSGDR 217
Query: 277 I---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 333
G+ +++ F+++++GIV+VQE R+IPI A R R + +YLP ++N GV
Sbjct: 218 STVGGIVILLLVFLVMIVGIVFVQEGTRRIPIVSARRQVGRRLYPESRSYLPLRLNQGGV 277
Query: 334 MPIIFSTSSLALPGTLAR--FTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYT 388
MPIIF+++ L LP +LA F G L + A++L+PGG Y+ ++LI FF+Y+Y
Sbjct: 278 MPIIFASAVLILPVSLANNFFRGNETLNRIALSLSPGGPMPWLYVSFYLVLILFFSYFYA 337
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L ++P D+++ LK+ GASIP +RPGK+T+ +++ VL+R++ LG++FL ++A P +E
Sbjct: 338 SLIVNPVDMAQNLKKMGASIPGIRPGKATSEYVERVLNRLTFLGAIFLGMVAIIPTAVES 397
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T + F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 ATRVRTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 438
>gi|428217357|ref|YP_007101822.1| protein translocase subunit SecY [Pseudanabaena sp. PCC 7367]
gi|427989139|gb|AFY69394.1| protein translocase subunit secY/sec61 alpha [Pseudanabaena sp. PCC
7367]
Length = 435
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/439 (40%), Positives = 272/439 (61%), Gaps = 14/439 (3%)
Query: 56 TKREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREA 115
R KS SA+ M ++ L + L +G L L RLG+YIPL G++R
Sbjct: 3 VNRSKSPSAQETFMQMAQAA---------GLRSRLLVTIGMLVLIRLGMYIPLPGIDRSV 53
Query: 116 FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
++ L L++F+GGG LG+ +LGI+PFINA I+ Q+LA P L++LQK EG
Sbjct: 54 LETLARSSNTLGFLNTFAGGGFTLLGVFALGILPFINASIIMQILAAALPSLENLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIGQVLYL----RPYVNDFSTDWVLTSVTLLTLGSAFT 231
EAGR+K+ QYTRY ++ FA++Q IG L+L + D ++ + L GS F
Sbjct: 114 EAGRRKISQYTRYVALFFAVLQGIGISLFLININATTIPDPGFQFIFETAIALVAGSMFV 173
Query: 232 TYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIIS-FILLV 290
+ GE I++ +GNG SLLIF +I++ LP+S G T++ QD +G +++ F+ ++
Sbjct: 174 MWAGELITERGVGNGASLLIFINIVAVLPSSLGDTISLTQQDSAMLGGVLLLLVIFLAMI 233
Query: 291 LGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLA 350
+GIV+VQE ER+I I YA R R ++S+YLP K+N GVMPIIF++S LP L+
Sbjct: 234 VGIVFVQEGERRIQIIYARRQVGRKMYREQSSYLPLKLNQGGVMPIIFASSVFFLPAILS 293
Query: 351 RFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
A+++ + L PG Y+ T ++LI F+Y+Y+ + LDP D+S+ LK+ GASIP
Sbjct: 294 DVFSSVAMQRVSSFLTPGSWGYVVTYLVLILAFSYFYSSIVLDPVDLSQNLKKMGASIPG 353
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
VRPG +T+ ++ +VL+R+ LG++FL +A P EQ T +T F+G TS+LI+VG A
Sbjct: 354 VRPGTATSTYISSVLNRLIFLGAIFLGAVAIIPTAFEQATGVTTFQGIGATSLLIIVGVA 413
Query: 471 TDTARKVQAEIISQKYKNI 489
+TAR++Q +ISQ+Y+ +
Sbjct: 414 IETARQIQTYVISQRYEGM 432
>gi|170077667|ref|YP_001734305.1| preprotein translocase subunit SecY [Synechococcus sp. PCC 7002]
gi|169885336|gb|ACA99049.1| preprotein translocase SecY subunit [Synechococcus sp. PCC 7002]
Length = 439
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 180/442 (40%), Positives = 277/442 (62%), Gaps = 20/442 (4%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ +A+ M ++ L G+ L LG L L R G++IP+ G++R A
Sbjct: 5 REKTPTAQETFMQMAQAA---------GLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALS 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
+ + LL LD F+GGG+ +GI +LGI+P+INA I+ QL+ P L+D+QK +GEA
Sbjct: 56 EGIQNSPLLGFLDVFAGGGLSAVGIFALGILPYINASIIMQLMTAAIPALEDMQKNDGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
GR+K+ Q RY +VG+A +Q+ G L LRPY D +VL + LT GS F +I E
Sbjct: 116 GRRKISQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETTLALTAGSVFVMWISE 175
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATII---ISFILLVLGI 293
I++ LGNG SLLIF +I++ LP + G T+ E Q G +A +I + F+++++GI
Sbjct: 176 LITEKGLGNGASLLIFVNIVAVLPRTLGNTI-EFAQTGGRAVIAKVILLLVVFLIMIVGI 234
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+VQE R+IPI A R R +R++YLP ++N GVMPIIF+++ L LP +LA
Sbjct: 235 VFVQEGTRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLA 294
Query: 354 GIA------ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
G A+ + L PG Y+ + LI FF+Y+Y L ++P D+++ LK+ G+S
Sbjct: 295 GSGEGFFGQAIATISTLLQPGRIPYVLVYLALILFFSYFYASLIVNPVDMAQNLKKMGSS 354
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +RPG++T+ +L+ V++R+++LG++FL ++A P +E T +T RGF TS+LILV
Sbjct: 355 IPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVTTLRGFGATSLLILV 414
Query: 468 GCATDTARKVQAEIISQKYKNI 489
G A DTA+++Q +ISQ+Y+ +
Sbjct: 415 GVAIDTAKQIQTYVISQRYEGM 436
>gi|443474827|ref|ZP_21064795.1| protein translocase subunit secY/sec61 alpha [Pseudanabaena biceps
PCC 7429]
gi|443020416|gb|ELS34378.1| protein translocase subunit secY/sec61 alpha [Pseudanabaena biceps
PCC 7429]
Length = 446
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 272/420 (64%), Gaps = 16/420 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLGIY+PL GV+R F + N++++ LD FSGGG+ LGI +L
Sbjct: 24 LRGRLLVTVGVLILVRLGIYLPLPGVDRLRFTEIVKNNAVVNFLDIFSGGGLSLLGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QL+ P L++LQK EGEAGR+K+ QYTRY + + I+Q+ G +++
Sbjct: 84 GILPFINASIIMQLMTSALPSLENLQKNEGEAGRRKISQYTRYVAFVWGIIQSWGLGVWV 143
Query: 206 RP--YVNDFSTDWV-------------LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
+ ++D S +W+ + L G+ F + GE I++ +GNG SLL
Sbjct: 144 QNSGVLSDASANWITIGDGRVIFSSFIFQTTVALAAGAMFVMWAGELITEKGVGNGASLL 203
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIG-LATIIISFILLVLGIVYVQEAERKIPINYAS 309
IF SI++ LP S G T++ A +D + +G + +++ F+++++GIV+VQE R+IPI A
Sbjct: 204 IFISIVANLPKSLGDTISLAQKDSSRVGGVILLLVIFLIMIVGIVFVQEGTRRIPIISAR 263
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGG 369
R R ++++YLP ++N GVMPIIF++S + LP L++ A ++P G
Sbjct: 264 RQVGRKLYREQASYLPLRLNQGGVMPIIFASSVMILPAYLSQSINNEVFVSIATWISPSG 323
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++P +LLI F+++Y+ L L+P ++S+ LK+ G+SIP VRPG +T+ ++ VL+R++
Sbjct: 324 PGHIPVYMLLILGFSFFYSTLVLNPVELSQNLKKMGSSIPTVRPGTATSDYISGVLNRLT 383
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+LGSVFL +A P+ +E+ T ++ F G TS+LILVG A +T++++Q +ISQ+Y+ +
Sbjct: 384 LLGSVFLCGIAIIPSALEKATGVSTFSGIGATSLLILVGVAIETSKQIQTYVISQRYEGM 443
>gi|16329923|ref|NP_440651.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|383321666|ref|YP_005382519.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324835|ref|YP_005385688.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490719|ref|YP_005408395.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435986|ref|YP_005650710.1| preprotein translocase subunit SecY [Synechocystis sp. PCC 6803]
gi|451814082|ref|YP_007450534.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|2500730|sp|P77964.1|SECY_SYNY3 RecName: Full=Protein translocase subunit SecY
gi|1652409|dbj|BAA17331.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|339273018|dbj|BAK49505.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
gi|359270985|dbj|BAL28504.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274155|dbj|BAL31673.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277325|dbj|BAL34842.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957815|dbj|BAM51055.1| preprotein translocase subunit SecY [Bacillus subtilis BEST7613]
gi|451780051|gb|AGF51020.1| preprotein translocase SecY subunit [Synechocystis sp. PCC 6803]
Length = 442
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 266/400 (66%), Gaps = 11/400 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+GI+IP+ ++R+AF ++ NS++ L+ F+GGG+ +GI +LGI+P+INA I+ QLL
Sbjct: 39 RVGIFIPVPDIDRQAFSQAINDNSVIGFLNIFTGGGLSTVGIFALGILPYINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ QY+RY + G+ I+Q +G V LRPY N++ ++
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKISQYSRYIAFGWCIIQGLGLTVGLLRPYANNYGPLFIFQ 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYI 277
+V +T GS F +I E I++ +GNG SLLIF +I++ LP + G+T+ A G +
Sbjct: 159 TVLAITAGSMFVMWISELITERGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSIT 218
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ +++ F+++++GIV+VQE R+IPI A R + +R++YLP ++N GVMPII
Sbjct: 219 AVVLLMLVFLVMIVGIVFVQEGTRRIPIISARRQVGKKLYRERTSYLPLRLNQGGVMPII 278
Query: 338 FSTSSLALPGTLARFT----GIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTF 389
F+++ L LP +LA F G+ + V AL PG Y ++I FF+Y+Y
Sbjct: 279 FASAVLILPSSLAGFATGNEGLGGFGEIFVQISNALRPGTWVYTVVYSVMIFFFSYFYAS 338
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P+DVS+ LK+ G+SIP +RPGK T +L+ VL+R++ LG++FL+ +A P +EQ
Sbjct: 339 LIVNPEDVSKNLKKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQA 398
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 TGVTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 438
>gi|56751892|ref|YP_172593.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
6301]
gi|81301023|ref|YP_401231.1| preprotein translocase subunit SecY [Synechococcus elongatus PCC
7942]
gi|61242549|sp|P0A4H0.1|SECY_SYNE7 RecName: Full=Protein translocase subunit SecY
gi|61242553|sp|P0A4H1.1|SECY_SYNP6 RecName: Full=Protein translocase subunit SecY
gi|282208|pir||S27155 preprotein translocase secY - Synechococcus sp
gi|47618|emb|CAA48194.1| SecY protein [Synechococcus elongatus PCC 7942]
gi|2446908|dbj|BAA22467.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|56686851|dbj|BAD80073.1| preprotein translocase SecY subunit [Synechococcus elongatus PCC
6301]
gi|81169904|gb|ABB58244.1| protein translocase subunit secY/sec61 alpha [Synechococcus
elongatus PCC 7942]
Length = 439
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 270/418 (64%), Gaps = 19/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI+IP+ G++R AF +L N+ ++ LD FSGGG+ LG
Sbjct: 24 LRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALG 83
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+ +LGI+P+INA I+ QLL P L+DLQK EGEAGR+K+ Q TRY S+G+A++Q+I
Sbjct: 84 VFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVI 143
Query: 202 VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
+++ Y + + + L GS F +I E I++ +GNG SLLIF +I++ LP
Sbjct: 144 AVWVTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPR 203
Query: 262 SFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S +T+ E Q G+ G+ ++I F+ ++GIV+VQE R+IP+ A R
Sbjct: 204 SLQQTL-ELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYS 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS-------F 371
+RS+YLP ++N GVMPIIF+++ L LP +LA FT + + A L+P G F
Sbjct: 263 ERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTSNEVVLRIANYLSPNGPTPWIYALF 322
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL +LI F+Y+Y+ L L+P D+++ LK+ G+SIP VRPG++T+ +++ VL+R+++L
Sbjct: 323 YL----VLIVAFSYFYSSLILNPVDLAQNLKKMGSSIPGVRPGRATSQYVQGVLNRLTIL 378
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+VFL ++A P +E T + F+GF TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 379 GAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>gi|428781718|ref|YP_007173504.1| preprotein translocase subunit SecY [Dactylococcopsis salina PCC
8305]
gi|428695997|gb|AFZ52147.1| preprotein translocase, SecY subunit [Dactylococcopsis salina PCC
8305]
Length = 448
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 272/423 (64%), Gaps = 20/423 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L +G + L RLG+ IP+ GV+R F + + + L+ SGGG+ +GI +L
Sbjct: 24 LRSRLLITVGLILLVRLGVRIPVPGVDRAGFAQAVQDSPISGFLNFLSGGGLSAVGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY ++ AI + G ++
Sbjct: 84 GILPFINASIIMQLLTAALPYLENLQKNEGEAGRRKISQITRYVALASAIFNSFGLASFV 143
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+PY + ++L +V LT GS F +I E I++ +GNG SLLIF +I++ LP + G
Sbjct: 144 QPYAYNPGPIFLLKTVIALTAGSMFVIWISELITERGIGNGASLLIFVNIVAILPTTLGN 203
Query: 266 TVAEAFQDGNYIGLA---TIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+ E Q G +A + + F+++++GIV+VQE R+IPI A R R +R++
Sbjct: 204 TI-EFAQTGGREAVAQVLVLALVFLVMIVGIVFVQEGTRRIPIVSARRQVGRRLYRERTS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF--------TGIAA-----LKKAAVALNPGG 369
YLP +VN GV+PIIF+++ L LP +LA+F TGIAA L + + LNPGG
Sbjct: 263 YLPLRVNQGGVLPIIFASTLLILPSSLAQFTQGGSEEQTGIAATLNQFLIQVSTYLNPGG 322
Query: 370 S---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
Y+ +LLI FF+Y+Y L ++P D+S+ LK+ GASIP +RPGK+T+ +L+ V++
Sbjct: 323 PTPWLYVSVYLLLILFFSYFYASLVVNPVDMSQNLKKMGASIPGIRPGKATSDYLQKVIN 382
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R+++LG++FL ++A P +E T +T F+G TS+LILVG A DTA+++Q+ +ISQ+Y
Sbjct: 383 RLTLLGAIFLGLVATVPTAVETATGVTTFQGLGATSLLILVGVAIDTAKQIQSSVISQRY 442
Query: 487 KNI 489
+ +
Sbjct: 443 EGM 445
>gi|90994487|ref|YP_536977.1| preprotein translocase subunit SecY [Pyropia yezoensis]
gi|122194692|sp|Q1XDJ1.1|SECY_PORYE RecName: Full=Protein translocase subunit SecY
gi|90819051|dbj|BAE92420.1| Preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 264/407 (64%), Gaps = 1/407 (0%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGI 63
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+IN+ IV QLL +I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+
Sbjct: 64 FALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWATLQSGAIS 123
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++++PYV +++ +V SV LT GS ++ E I++ +GNG SLLIF +I+S LP +
Sbjct: 124 IWVKPYVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKN 183
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
F ++ +A + I F+L+++ + VQE R+I I ++R +S L ++
Sbjct: 184 FTQSFFDASYSNASLKFGLFIAIFLLMIIITICVQEGTRRIKI-ISARQLGKSSILDPNS 242
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLP K+N GVMPI+F+++S+ALP L + L + P GS YL LI F
Sbjct: 243 YLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILYLFCPNGSLYLLLYCALILF 302
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F+Y+YT + ++P+D++ LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A
Sbjct: 303 FSYFYTSIVMNPEDIAINLKKMGASIPNIRPGQATIDYLQVILNRLTFLGASFLFTVALI 362
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +IE+ T + RG TS+LILVG A DTA+++Q +IS+KY ++
Sbjct: 363 PFIIEKVTQIQNLRGLGATSLLILVGVAIDTAKQIQTYVISKKYDSM 409
>gi|11465763|ref|NP_053907.1| preprotein translocase subunit SecY [Porphyra purpurea]
gi|1711367|sp|P51297.1|SECY_PORPU RecName: Full=Protein translocase subunit SecY
gi|1276763|gb|AAC08183.1| Preprotein translocase subunit (chloroplast) [Porphyra purpurea]
Length = 411
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 259/391 (66%), Gaps = 9/391 (2%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
GI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI +LGIVP+IN+ IV QLL +
Sbjct: 24 GIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLLTK 83
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+ ++++PYV +++ +V SV
Sbjct: 84 IIPDLEKLQKEEGELGRQKITQITRYLALGWATLQSGAISIWVKPYVFNWNFTFVCESVL 143
Query: 223 LLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY----IG 278
LT GS ++ E I++ +GNG SLLIF +I+S LP +F ++F D NY I
Sbjct: 144 ALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKNF----TQSFFDANYSNTSIK 199
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
I+ F+L+++ ++VQE R+I I ++R +S L ++YLP K+N GVMPI+F
Sbjct: 200 FGLFIVIFLLMIIITIFVQEGTRRIKI-ISARQLGKSSILDPNSYLPLKLNQGGVMPIVF 258
Query: 339 STSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVS 398
+++S+ALP L + T L + P GS YL +LI FF+Y+YT + ++P+D++
Sbjct: 259 ASASMALPAYLTQLTQNTFLLQVLYLFCPNGSLYLVLYSVLILFFSYFYTSIVMNPEDIA 318
Query: 399 EQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGF 458
LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A P +IE+ + RG
Sbjct: 319 TNLKKMGASIPNIRPGQATIDYLQVILNRLTFLGATFLFTVALIPFIIEKVAQIQNLRGL 378
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKYKNI 489
TS+LILVG A DTA+++Q +IS+KY ++
Sbjct: 379 GATSLLILVGVAIDTAKQIQTYVISKKYDSM 409
>gi|416398022|ref|ZP_11686782.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Crocosphaera
watsonii WH 0003]
gi|357262601|gb|EHJ11715.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Crocosphaera
watsonii WH 0003]
Length = 438
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 260/397 (65%), Gaps = 8/397 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++R F + NS+L LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 39 RFGIFIPIPGIDRTEFARAISDNSVLGFLDIFTGGGISTLGIFALGILPFINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ Q TRY + G++++Q+ + LRPY +V
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKISQITRYVAAGWSVIQSTAITIGLLRPYALGDPFWFVPE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG- 278
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+T+ A G
Sbjct: 159 TVLALTAGSMFVMWVSELITERGIGNGASLLIFVNIVASLPRTLGQTIDYAQTGGRQAAA 218
Query: 279 -LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPII
Sbjct: 219 QVVILLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRKLYRERTSYLPLRLNQGGVMPII 278
Query: 338 FSTSSLALPGTLARF---TGIAA--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
F+++ L LP +LA F G + L + A AL PG Y+ LLI FF+Y+Y L +
Sbjct: 279 FASAVLILPQSLAGFFRNDGAVSEVLVQVANALRPGTWVYVGVYSLLILFFSYFYASLIV 338
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P+DVS+ LK+ G+SIP +RPG+ T +L+ VL+R++ LG++FL+ +A P ++E T +
Sbjct: 339 NPEDVSKNLKKMGSSIPGLRPGEKTKQYLEGVLNRLTFLGAIFLSFVATVPTLVEGATGV 398
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 TTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|356508398|ref|XP_003522944.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 179
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/172 (89%), Positives = 162/172 (94%)
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNY 385
++VNSSGVMPIIFSTSSLALPGTLARFTG+ ALKKA+VALNPGGSFYLP NILLIAFFNY
Sbjct: 8 YQVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKASVALNPGGSFYLPFNILLIAFFNY 67
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
YYTFLQLDPDDVSEQLKRQGASIPLVRPG+S A F+KTVLSRISVLGS FLAILAAGP V
Sbjct: 68 YYTFLQLDPDDVSEQLKRQGASIPLVRPGRSAATFIKTVLSRISVLGSTFLAILAAGPTV 127
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDSY 497
+EQ THLTAFRGF GTS+LILVGCATDTARKVQAEIISQKYKNIEFYD D Y
Sbjct: 128 VEQITHLTAFRGFVGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 179
>gi|428220882|ref|YP_007105052.1| protein translocase subunit SecY [Synechococcus sp. PCC 7502]
gi|427994222|gb|AFY72917.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp. PCC
7502]
Length = 434
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/408 (41%), Positives = 267/408 (65%), Gaps = 4/408 (0%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L RLGI++PL G+NR F + NS+++ LD FSGGG+ LGI +L
Sbjct: 24 LRGRLLVTIGMLILVRLGIFLPLPGINRAIFAEAVKNNSVVNFLDIFSGGGLSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QL+ P L++LQK EGEAGR+K+ QYTRY ++G+A++Q+ G +++
Sbjct: 84 GIIPYINASIIMQLMTTALPTLENLQKNEGEAGRRKISQYTRYVALGWALLQSFGISIWV 143
Query: 206 RPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ V + + L ++ LT GS F + GE +++ +GNG SLLIF SI+S LP S
Sbjct: 144 QGTGAVVNPGIGFSLETMVALTAGSMFVMWAGELVTERGVGNGASLLIFVSIVSGLPRSL 203
Query: 264 GRTVAEAFQDGNYIGLATIIIS-FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G T+A A D + +G +++S F+++++ IV+VQE R+IPI A R R ++S+
Sbjct: 204 GSTIALAQADSSRVGGVLLLLSIFLVMIVCIVFVQEGTRRIPIISARRQVGRKLYREQSS 263
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIA 381
YLP K+N GVMPIIF++S L LP + + F + L P Y+ ++LI
Sbjct: 264 YLPLKLNQGGVMPIIFASSVLILPSFIGQTFASNQIVASVTSFLAPNTWGYVLFYLVLIL 323
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
F+Y+Y+ L ++P D+S+ LK+ G+S+P +RPG +T+ +L VL+R+++LG++FL +A
Sbjct: 324 GFSYFYSSLIVNPVDMSQNLKKMGSSVPGIRPGTATSTYLTKVLNRLTLLGAIFLGAVAI 383
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +E+ T + F G T++LILVG A +T++++Q +ISQKY+ +
Sbjct: 384 IPTAVERATGVATFSGIGATTLLILVGVAIETSKQIQTYVISQKYEGM 431
>gi|334120591|ref|ZP_08494670.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
gi|333456193|gb|EGK84828.1| preprotein translocase, SecY subunit [Microcoleus vaginatus FGP-2]
Length = 434
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 277/442 (62%), Gaps = 24/442 (5%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ +A+ M ++ L G+ L +G L L RLG+++P+ G++R AF
Sbjct: 5 REKAPTAQETFMQMAQAA---------GLRGRILVTIGLLILVRLGVHLPVPGIDRVAFA 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
N++ + L+ LD FSGGG+ LGI +LGI+P+INA I+ QLL P L+DLQK EGEA
Sbjct: 56 QNVENSPLIGFLDLFSGGGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
GR+K+ Q TRY S+G+AI+Q++G +++ P+ + ++ + LT GS F ++ E
Sbjct: 116 GRRKISQITRYVSLGWAILQSVGIAIWVSPFAQAPAPLFIAQTALALTAGSMFVMWVSEL 175
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIV 294
+++ +GNG SLLIF +I+S LP S G+T E Q G+ + +++ F++ ++GIV
Sbjct: 176 VTERGIGNGASLLIFINIVSVLPRSLGQTF-ELAQSGDTQVVGRVVVLLLVFLVTIVGIV 234
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 354
+VQE R+IPI A R R + +YLP ++N GVMPIIF++S L +P LA+
Sbjct: 235 FVQEGTRRIPIISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQSLN 294
Query: 355 IAALKKAAVALNPGGS-------FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
L + A L+P G FYL LI FF+Y+Y L ++P D+S+ LK+ GAS
Sbjct: 295 NPFLVQVANVLSPNGPAPWAYALFYL----TLILFFSYFYASLIVNPVDMSQNLKKMGAS 350
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +RPG+ T+ +++ VL+R++ LG++FL ++A P +E + FRGF TS+LILV
Sbjct: 351 IPGIRPGQKTSDYVEKVLNRLTFLGAIFLGLVAIVPTAVESAIGVQTFRGFGATSLLILV 410
Query: 468 GCATDTARKVQAEIISQKYKNI 489
G A +TA+++Q +ISQ+Y+ +
Sbjct: 411 GVAIETAKQIQTYVISQRYEGM 432
>gi|428320034|ref|YP_007117916.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
gi|428243714|gb|AFZ09500.1| protein translocase subunit secY/sec61 alpha [Oscillatoria
nigro-viridis PCC 7112]
Length = 434
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 276/442 (62%), Gaps = 24/442 (5%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV 117
REK+ +A+ M ++ L G+ L +G L L RLG+++P+ G++R AF
Sbjct: 5 REKAPTAQETFMQMAQAA---------GLRGRILVTIGLLILVRLGVHLPVPGIDRVAFA 55
Query: 118 GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEA 177
N+ + L+ LD FSGGG+ LGI +LGI+P+INA I+ QLL P L+DLQK EGEA
Sbjct: 56 QNVQNSPLIGFLDLFSGGGLSALGIFALGILPYINASIIVQLLTAALPSLEDLQKNEGEA 115
Query: 178 GRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
GR+K+ Q TRY S+G+AI+Q+IG +++ P+ + ++ + LT GS F ++ E
Sbjct: 116 GRRKISQITRYVSLGWAILQSIGIAIWVSPFAQSPAPLFIAQTALALTAGSMFVMWVSEL 175
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIV 294
+++ +GNG SLLIF +I+S LP S G+T E Q G+ + +++ F++ ++GIV
Sbjct: 176 VTERGIGNGASLLIFINIVSVLPRSLGQTF-ELAQSGDTQVVGRVVVLLLVFLVTIVGIV 234
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 354
+VQE R+IPI A R R + +YLP ++N GVMPIIF++S L +P LA+
Sbjct: 235 FVQEGTRRIPIISARRQVGRKVYRESRSYLPLRLNQGGVMPIIFASSVLIVPSFLAQSLN 294
Query: 355 IAALKKAAVALNPGGS-------FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
L + A L+P G FYL LI FF+Y+Y L ++P D+S+ LK+ GAS
Sbjct: 295 NPFLVQVANVLSPNGPAPWAYALFYL----TLILFFSYFYASLIVNPVDMSQNLKKMGAS 350
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +RPG+ T+ +++ VL+R++ LG++FL ++A P +E + FRGF TS+LILV
Sbjct: 351 IPGIRPGQKTSDYVEKVLNRLTFLGAIFLGLVAIVPTAVESAIGVQTFRGFGATSLLILV 410
Query: 468 GCATDTARKVQAEIISQKYKNI 489
G A +TA+++Q +ISQ+Y+ +
Sbjct: 411 GVAIETAKQIQTYVISQRYEGM 432
>gi|428777699|ref|YP_007169486.1| protein translocase subunit SecY [Halothece sp. PCC 7418]
gi|428691978|gb|AFZ45272.1| protein translocase subunit secY/sec61 alpha [Halothece sp. PCC
7418]
Length = 450
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 269/425 (63%), Gaps = 22/425 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L +G + L RLG+ IP+ G++R +F + + + L+ SGGG+ +GI +L
Sbjct: 24 LRSRLLITVGLILLVRLGVRIPVPGIDRASFAEAVQNSPISGFLNFLSGGGLSAVGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY ++ A+ + G ++
Sbjct: 84 GILPFINASIIMQLLTAGLPYLENLQKNEGEAGRRKISQITRYVALASAVFNSFGLASFV 143
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+PY + ++L +V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G
Sbjct: 144 QPYAYNPGPIFLLKTVIALTAGSMFVIWLSELITERGIGNGPSLLIFVNIVAVLPRTLGN 203
Query: 266 TVAEAFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+ E Q G +A ++I F+++++GIV+VQE R+IPI A R R +R++
Sbjct: 204 TI-EFAQTGGREAVAQVLILALVFLVMIVGIVFVQEGTRRIPIVSARRQVGRRLYRERTS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---------------LKKAAVALNP 367
YLP +VN GV+PIIF+++ L LP +LA+FT L + + +NP
Sbjct: 263 YLPLRVNQGGVLPIIFASTLLILPSSLAQFTQGGGGEEEAAGIGATINDILVQISTYMNP 322
Query: 368 GGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
G Y+ +LLI FF+Y+Y L ++P D+S+ LK+ GASIP +RPGK+T+ +L+ V
Sbjct: 323 SGPTPWLYVTIYLLLILFFSYFYAALVVNPVDMSQNLKKMGASIPGIRPGKATSDYLQKV 382
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
++R+++LG++FL I+A P +E T +T F+G TS+LILVG A DTA+++Q+ +ISQ
Sbjct: 383 INRLTLLGAIFLGIVATVPTAVETATGVTTFQGLGATSLLILVGVAIDTAKQIQSSVISQ 442
Query: 485 KYKNI 489
+Y+ +
Sbjct: 443 RYEGM 447
>gi|354565812|ref|ZP_08984986.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
gi|353548685|gb|EHC18130.1| preprotein translocase, SecY subunit [Fischerella sp. JSC-11]
Length = 440
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 267/416 (64%), Gaps = 12/416 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI+IP+ G++R+AF ++ N+ + S LD FSGGG+ LG+ +
Sbjct: 23 LRGRLLVTVGILILIRLGIHIPIPGIDRQAFAAAINSNNQVFSFLDIFSGGGLSALGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+P+INA I+ QLL P L++LQK EGEAGR+++ Q TRY S+G+AI+Q++
Sbjct: 83 LGILPYINASIIIQLLTAAIPYLENLQKNEGEAGRRRISQITRYVSLGWAILQSVFLAAF 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+LRP+ +F +V+ + L GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 WLRPFALNFGPVFVIETAVALVAGSMFVMWASEVITERGVGNGASLLIFVNIVATLPKSL 202
Query: 264 GRTVAEAFQDGNYI------GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
T+A G I + +++ F+ ++GIV+VQEA R+IPI A R R
Sbjct: 203 SDTIAYIQGSGQEIVRERVGPVIVLVLVFLFTIVGIVFVQEAIRRIPIISARRQVGRRIF 262
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYL 373
++ +YLP ++N GVMPIIF+ + L+LP +A FT L L+PGGS Y
Sbjct: 263 AEQRSYLPLRLNQGGVMPIIFAAAILSLPLFIANFTKNPELANIINTYLSPGGSQSWVYA 322
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
++ I FF+Y+Y+ L ++P DV++ LK+ G+SIP +RPGK+T+ +++ +L+R++ LG+
Sbjct: 323 LVYLVSIIFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGKATSEYIERILNRLTFLGA 382
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+FL ++A P +E + FRG TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 383 IFLGLIAIIPTAVETALGVPTFRGLGATSLLILVGVAIETAKQVQTYVISQRYEGM 438
>gi|113476561|ref|YP_722622.1| preprotein translocase subunit SecY [Trichodesmium erythraeum
IMS101]
gi|110167609|gb|ABG52149.1| protein translocase subunit secY/sec61 alpha [Trichodesmium
erythraeum IMS101]
Length = 446
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 257/400 (64%), Gaps = 18/400 (4%)
Query: 107 PLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPK 166
P+ G+NREAF + +L LD FSGGG LGI +LGI+P+INA I+ QL+ P
Sbjct: 45 PVPGINREAFQARIGDQALTGFLDLFSGGGFSALGIFALGIIPYINASIIIQLMTAALPS 104
Query: 167 LQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT---- 222
L++LQK EGEAGR+K+ Q TRY ++G++++Q+ G +YL D + + V S+
Sbjct: 105 LENLQKNEGEAGRRKISQITRYVALGWSVLQSFGLAIYLNSSSVDINGELVTVSINPGSL 164
Query: 223 -------LLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN 275
+T GS F +I E I++ +GNG SLLIF +I++ LP S G T+ + F+ G+
Sbjct: 165 FIAKTILAITAGSMFVMWISELITERGIGNGASLLIFVNIVAVLPQSLGDTI-KLFEGGD 223
Query: 276 --YIGLATI-IISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
+G A I ++ F+++++GIV+VQE R+IPI A R R + +YLP ++N G
Sbjct: 224 RAIVGRAIILLLVFLVMIVGIVFVQEGSRRIPILSARRQVGRKLYRETKSYLPLRLNQGG 283
Query: 333 VMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTF 389
VMPIIF+++ L LP +LA+F + + A A++P G Y +LI FF+Y+Y
Sbjct: 284 VMPIIFASAVLILPVSLAQFANSPIISQIATAISPSGPTPWLYALFYFVLILFFSYFYAS 343
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ GASIP +RPGK+T+ +++ VL+R++ LG++FL ++A P ++E
Sbjct: 344 LIMNPVDMSQNLKKMGASIPGIRPGKTTSDYIEKVLNRLTFLGAIFLGLVAIVPTIVESA 403
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T + FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 404 TRVPTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 443
>gi|116266128|gb|ABJ91302.1| preprotein translocase subunit [Pyropia yezoensis]
Length = 411
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 263/407 (64%), Gaps = 1/407 (0%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGI 63
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+IN+ IV QLL +I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+
Sbjct: 64 FALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWATLQSGTIS 123
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++++PYV +++ +V SV LT GS ++ E I++ +GNG SLLIF +I+S LP +
Sbjct: 124 IWVKPYVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKN 183
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
F ++ +A + I F+L+++ + VQE R+I I ++R +S L ++
Sbjct: 184 FTQSFFDASYSNASLKFGLSIAIFLLMIIITICVQEGTRRIKI-ISARQLGKSSILDPNS 242
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLP K+N GVMPI+F+++S+ALP L + L + P GS YL LI F
Sbjct: 243 YLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILYLFCPNGSLYLLLYCALILF 302
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F+Y+YT + ++P+D++ LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A
Sbjct: 303 FSYFYTSIVMNPEDIAINLKKMGASIPNIRPGQATIDYLQVILNRLTFLGASFLFTVALI 362
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +IE+ T + RG TS+L LVG A DTA+++Q +IS+KY ++
Sbjct: 363 PFIIEKVTQIQNLRGLGATSLLTLVGVAIDTAKQIQTYVISKKYDSM 409
>gi|332712150|ref|ZP_08432078.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
gi|332348956|gb|EGJ28568.1| protein translocase subunit secY/sec61 alpha [Moorea producens 3L]
Length = 446
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 272/420 (64%), Gaps = 16/420 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L+RLG+++P+ G++R F L + + LD FSGGG LGI +L
Sbjct: 24 LRGRLLVTVGLLILARLGVFLPVPGIDRARFSAELQNSPFVGLLDFFSGGGFSALGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL P L++LQK EGEAGR+K+ Q TRY ++G++++Q+IG L+
Sbjct: 84 GILPYINASIILQLLTAAIPALENLQKNEGEAGRRKIGQITRYVALGWSVIQSIGLSLWA 143
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ + + +V +V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+
Sbjct: 144 QRFAVEPGAFFVFETVLALTAGSMFVMWLSELITERGIGNGASLLIFVNIVAVLPRTLGQ 203
Query: 266 TVAEAFQDG-NYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
T+ A G +G + +++ F+++++GIV+VQE R+IPI A R + +R Y
Sbjct: 204 TIELAQTGGRETVGKVIVLLLVFLVMIVGIVFVQEGSRRIPIITARRQVGKRLYRERKNY 263
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFT------GI-----AALKKAAVALNPGGS-- 370
LP ++N GVMPIIF+++ L LP +LA T G+ L + A LNP G
Sbjct: 264 LPLRLNQGGVMPIIFASAVLILPTSLAGITSGDNSNGLLGSINQVLIQIANYLNPNGQTP 323
Query: 371 -FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y+ ++LI FF+Y+Y L ++P D+S+ LK+ GASIP +RPG++T+ +++ VL+R++
Sbjct: 324 WVYVAVYLVLILFFSYFYASLIINPVDMSQNLKKMGASIPGIRPGRATSEYIERVLNRLT 383
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+LG++FL ++A P +E T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 384 LLGAIFLGLVAVVPTAVESATGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 443
>gi|443329313|ref|ZP_21057900.1| protein translocase subunit secY/sec61 alpha [Xenococcus sp. PCC
7305]
gi|442791055|gb|ELS00555.1| protein translocase subunit secY/sec61 alpha [Xenococcus sp. PCC
7305]
Length = 440
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 267/401 (66%), Gaps = 12/401 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLGI+IP+ G++R +F + +L LD F+GGG+ LGI +LGI+PFINA I+ QLL
Sbjct: 37 RLGIFIPVPGIDRASFAEAVQNLPVLGFLDIFTGGGLSALGIFALGILPFINASIIMQLL 96
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ QYTRY ++ +AI+Q++G + LRPY + ++
Sbjct: 97 TAAIPALEDLQKNEGEAGRRKISQYTRYVALAWAILQSLGLTIGLLRPYALNPGFWFIPE 156
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--YI 277
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 TVLALTAGSMFVMWVSELITERGIGNGASLLIFINIVATLPKNLGNTIEFAQQGGREAVA 216
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ +++ F++ ++GIV+VQE R+IPI A R + +R++YLP ++N GVMPII
Sbjct: 217 QVVILLLVFLVTIVGIVFVQEGTRRIPIISARRQVGKRLYRERTSYLPLRLNQGGVMPII 276
Query: 338 FSTSSLALPGTLARFTGIAA-----LKKAAVALNP--GGSFYLPTNI--LLIAFFNYYYT 388
F+T+ ++LP +LA+F G + L + A A+ P G ++ LLI FF+Y+Y
Sbjct: 277 FATAVISLPTSLAQFAGGDSGFGQILVQFANAVTPLRGEINWIAIAFQSLLILFFSYFYA 336
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L ++P D+S+ LK+ G SIP +RPGK+T+ +L+ V++R+++LG++FLA++ A P++IE
Sbjct: 337 SLIMNPVDMSQNLKKMGTSIPGIRPGKATSNYLEQVMNRLTLLGAIFLAVVVAIPSLIEA 396
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T + F GF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 397 ATRVQTFNGFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 437
>gi|113954766|ref|YP_729649.1| preprotein translocase subunit SecY [Synechococcus sp. CC9311]
gi|113882117|gb|ABI47075.1| preprotein translocase, SecY subunit [Synechococcus sp. CC9311]
Length = 439
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/413 (43%), Positives = 270/413 (65%), Gaps = 9/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L L RLGIYIP+ G++R AF ++Q +L+ LD F+GGGI LG+ +
Sbjct: 24 LRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLGVFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ +Q++ +
Sbjct: 84 LGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGTIQSVIFAMI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + +D V T L L GS ++ E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAVEGLSDVVFVFQTALALVTGSMIVMWLSEVITERGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTV--AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-Q 319
G T+ A+ G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LGSTIEKAQTGDRGDVVGIIILVLVFLITIVGIIFVQEGARRLPIVSAKRQVGGTALLPS 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL- 378
R +YLP K+N+ GVMPIIF+++ + LP T+A T L +AA ALNP + P IL
Sbjct: 264 RQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRAASALNPSAANPWPYAILF 323
Query: 379 --LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LI F+Y+Y+ L L+P D++ LKR G +IP VRPG +TAA+L+ V +R+++LG +FL
Sbjct: 324 FSLILGFSYFYSSLSLNPSDMATNLKRGGVAIPGVRPGSATAAYLEGVKNRLTLLGGLFL 383
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P+ +E+ T +T F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 384 GAVAIIPSAVERATGVTTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|443313550|ref|ZP_21043161.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
gi|442776493|gb|ELR86775.1| protein translocase subunit secY/sec61 alpha [Synechocystis sp. PCC
7509]
Length = 437
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 177/413 (42%), Positives = 265/413 (64%), Gaps = 10/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGIGRLGICS 144
L G+ +G L L+RLG+++P+ G+NRE F + + N+++ LD FSGGG+ LGI +
Sbjct: 23 LRGRLFVTIGILILARLGVFLPIPGINREQFTQAVQNNNAIIGFLDIFSGGGLSTLGIFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+P+INA I+ QLL P L++LQK EGEAGR+K+ Q TRY S G+A++Q+I +
Sbjct: 83 LGILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKISQITRYVSFGWAVLQSIFIAAI 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
++RP+ +V+ + L GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 WVRPFAIVPGPAFVVQTAIALIAGSMFIMWASELITERGVGNGASLLIFVNIVAALPKSL 202
Query: 264 GRTVAEAFQDGNYIGLATIIISFILL---VLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
G TV A Q G + +++ ++ ++GIV+VQEA RKIPI A R R +R
Sbjct: 203 GDTVTFA-QTGGRAAVGRVVVLLLVFLVTIVGIVFVQEASRKIPILSARRQVGRKVQEER 261
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSF---YLPTN 376
+YLP ++ GVMPIIF++S L LP LA TG A + A L+PGGS Y
Sbjct: 262 RSYLPLQLIQGGVMPIIFASSILILPAFLANATGNATISNIATNYLSPGGSAPWAYALVY 321
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
++ I FF+Y+Y L ++P D+S+ LK+ GASIP +RPGK+T+ +++ VL+R+++LG++FL
Sbjct: 322 LVSIVFFSYFYASLIVNPVDLSQNLKKMGASIPGIRPGKATSEYVEGVLNRLTLLGALFL 381
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P +E + FRG TS+LILVG A DTAR+V+ +ISQ+Y+ +
Sbjct: 382 GTVAIIPTAVESAVGVPTFRGLGATSLLILVGVAIDTARQVRTYVISQRYEGM 434
>gi|307154824|ref|YP_003890208.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7822]
gi|306985052|gb|ADN16933.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7822]
Length = 439
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 268/416 (64%), Gaps = 15/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L G+ L +G L L R GI++P+ G++R F + + L LD F+GGG+ LGI +L
Sbjct: 24 LRGRLLVTVGLLILVRFGIFVPVPGLDRAKFADFIQNSPALGILDIFTGGGLSTLGIFAL 83
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+PFINA I+ QLL P L+DLQK EGEAGR+K+ Q +RY ++G+AI+Q+ G L L
Sbjct: 84 GILPFINASIIMQLLTAAIPSLEDLQKNEGEAGRRKISQISRYVALGWAIIQSFGITLGL 143
Query: 206 --RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ V S +L +V LT GS F +I E I++ +GNG SLLIF +I++ LP +
Sbjct: 144 LVQNGVIAGSPIPILETVLALTAGSMFVMWISELITERGIGNGASLLIFVNIVAVLPKTL 203
Query: 264 GRTVAEAFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
G T+ A Q G +A ++I F+++++GIV+VQE R+IPI A R R +R
Sbjct: 204 GNTIDYA-QTGGRQAVAQVVILLLVFLIMIIGIVFVQEGTRRIPIISARRQVGRRLYRER 262
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-------FTGIAALKKAAVALNPGGSFYL 373
++YLP ++N GVMPIIF+++ L LP LAR F+ I L + L PG Y+
Sbjct: 263 TSYLPLRLNQGGVMPIIFASAVLILPYQLARSVSGEGTFSQI--LIRIVNYLQPGSWIYV 320
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
LLI FF+++Y L ++P D+S+ LK+ GASIP +RPG +T+ +L+ VL+R++ LG+
Sbjct: 321 LFYSLLIFFFSFFYASLIVNPKDMSQNLKKMGASIPGIRPGTATSNYLEGVLNRLTFLGA 380
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+FL+I+A P ++E T +T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 381 IFLSIVATVPTLVEGATGVTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|298491416|ref|YP_003721593.1| preprotein translocase subunit SecY ['Nostoc azollae' 0708]
gi|298233334|gb|ADI64470.1| preprotein translocase, SecY subunit ['Nostoc azollae' 0708]
Length = 437
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/412 (41%), Positives = 261/412 (63%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G+NRE F + NS+ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGINRERFAEAISGNNSIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+++ Q TRY +V +AI+Q++ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRQISQITRYVTVAWAIIQSVAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFLATIIGIVFVQEGMRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
++LP ++N GVMPIIF+ + L+LP +A FT A L L+P GS Y +
Sbjct: 263 SFLPLRLNQGGVMPIIFAAAILSLPLLVANFTKNADLANIVNTYLSPSGSGSWVYALVYM 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V SR++ LG++FL
Sbjct: 323 ISIVFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVSSRLTFLGALFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E T ++ FRG TS+LILVG A DTAR++Q +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVESTLNVPTFRGLGATSLLILVGVAIDTARQIQTYVISQRYEGM 434
>gi|428203670|ref|YP_007082259.1| preprotein translocase subunit SecY [Pleurocapsa sp. PCC 7327]
gi|427981102|gb|AFY78702.1| preprotein translocase, SecY subunit [Pleurocapsa sp. PCC 7327]
Length = 438
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 258/398 (64%), Gaps = 10/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI IP+ G++R F ++ + D +GGG+ +G+ +LGI+P+INA I+ QLL
Sbjct: 39 RFGISIPIPGIDRARFSADIANLPIFGIFDFLTGGGLKAVGLFALGILPYINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
A P L+DLQK EGEAGR+K+ Q TRY ++G+AI+Q++G + LRPY ++ +V
Sbjct: 99 AAAIPALEDLQKNEGEAGRRKISQITRYVALGWAIIQSLGITIGLLRPYAINYGFWFVAQ 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G T+ A Q G +
Sbjct: 159 TVLALTAGSMFVMWVSELITERGIGNGASLLIFLNIVAVLPKTLGDTIDLA-QTGGRDTI 217
Query: 280 ATIIISFILL---VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
A +++ ++ ++ IV+VQE R+IPI A R + +R++YLP ++N GVMPI
Sbjct: 218 AKVVLLLLVFLVTIIMIVFVQEGTRRIPIVSARRQVGKRLYRERTSYLPLRLNQGGVMPI 277
Query: 337 IFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP TLA AL + A L PG Y+ L+I FF+Y+Y L
Sbjct: 278 IFASAVLFLPSTLAGLFSNQGNISQALVQVANTLQPGSWIYIAVYSLMIIFFSYFYASLI 337
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P+DVS+ LK+ GASIP +RPG++T +L+ VL+R++ LG++FL+++A P ++E T
Sbjct: 338 VNPEDVSKNLKKMGASIPGIRPGEATTKYLQGVLNRLTFLGAIFLSVVAIVPTLVEGATG 397
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|443316468|ref|ZP_21045910.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
gi|442783901|gb|ELR93799.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
6406]
Length = 436
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 253/391 (64%), Gaps = 6/391 (1%)
Query: 105 YIPLGGVNREAFVGNLDQNSL---LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLA 161
+IP+ G++R AF ++ SL + +D F GGG+ LGI +LGI+PFINA I+ QLL
Sbjct: 43 FIPVPGIDRVAFGQAIESGSLGGFIGFIDIFVGGGLSALGIFALGILPFINASIIMQLLT 102
Query: 162 QINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ-AIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR++V Q TRY + G+AI+Q A+ + L P+ +V+ +
Sbjct: 103 AALPALEDLQKNEGEAGRRRVSQITRYVAFGWAILQSALLSIFLLSPFAEQPGIFFVVQT 162
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF-QDGNYIGL 279
V LT GS F ++GE I++ +GNG SLLIF +I+S LP S T+ A +D G+
Sbjct: 163 VIALTAGSMFVMWVGEVITERGIGNGASLLIFINIVSTLPRSLSLTLELAKGEDSRVGGV 222
Query: 280 ATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFS 339
+++ F+ +++GIV+VQE R+IPI A R R L++S YLP ++N GVMPIIF+
Sbjct: 223 IILLLVFLAMIVGIVFVQEGTRRIPIISARRQVGRKLYLEQSNYLPLRLNQGGVMPIIFA 282
Query: 340 TSSLALPGTLARFTGIAALKKAA-VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVS 398
++ L LP +L ++ A A LNP Y+ +++I FF+Y+Y L ++P+D+S
Sbjct: 283 SAVLVLPLSLTQYVSNPAFVGAVNTYLNPTSWVYVLLYLVMILFFSYFYASLVVNPEDMS 342
Query: 399 EQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGF 458
LK+ GASIP +RPGK+T ++ VL+R++ LG++FL ++A P+ +E T + F+G
Sbjct: 343 RNLKKMGASIPGIRPGKATTEYIGRVLNRLTFLGAIFLGLVAVIPSAVEGATRVQTFQGL 402
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKYKNI 489
TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 403 GATSLLILVGVAIETAKQVQTYVISQRYEGM 433
>gi|428301921|ref|YP_007140227.1| protein translocase subunit SecY [Calothrix sp. PCC 6303]
gi|428238465|gb|AFZ04255.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
6303]
Length = 437
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 279/442 (63%), Gaps = 19/442 (4%)
Query: 57 KREKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF 116
R+K SA+ M ++ L G+ L +G L L R+GI+IP+ ++R AF
Sbjct: 3 NRDKPQSAQDTFMQMAQAA---------GLRGRLLVTVGILMLIRMGIHIPIPNIDRLAF 53
Query: 117 VGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREG 175
+ +NS +LS LD FSGGG+ LGI +LGI+P+INA I+ QLL P L++LQK EG
Sbjct: 54 ADAVAKNSQILSFLDIFSGGGLSALGIFALGILPYINASIIIQLLTAAIPSLENLQKNEG 113
Query: 176 EAGRKKVLQYTRYASVGFAIVQAIGQV-LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYI 234
EAGR+K+ QYTRY S G+AI+Q++ +L+PY +F +V + L GS F +
Sbjct: 114 EAGRRKLSQYTRYVSFGWAILQSVFIAGFWLKPYAYNFGPLFVAQTAIALVAGSMFVMWA 173
Query: 235 GERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA---TIIISFILLVL 291
E I++ +GNG SLLIF +I++ LP + G T++ + GN + +++ F+L +
Sbjct: 174 SEVITERGIGNGASLLIFLNIVASLPKTLGDTISFV-ETGNREAVGRVIVLVLLFLLTTV 232
Query: 292 GIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR 351
GIV+VQE R+IPI A R R ++ ++LP ++N GVMPIIF+ + L+LP +++
Sbjct: 233 GIVFVQEGMRRIPIISARRQVGRRVLAEQRSFLPLRLNQGGVMPIIFAQAILSLPQFVSQ 292
Query: 352 FTGIAALKK-AAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
F+ + A L+PG S FY ++ I FF+Y+Y+ L ++P DVS+ LK+ GAS
Sbjct: 293 FSKNQDVANFVANYLSPGRSGSWFYSLVQLVAIVFFSYFYSSLIVNPVDVSQNLKKMGAS 352
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +RPGK+T+ +++ VL+R+++LG+VFL ++A P IEQ + FRG TS+LILV
Sbjct: 353 IPGIRPGKTTSEYIERVLNRLTLLGAVFLGLIAIIPTGIEQALGIPTFRGLGATSLLILV 412
Query: 468 GCATDTARKVQAEIISQKYKNI 489
G A DT++++Q +ISQ+Y+ +
Sbjct: 413 GVAIDTSKQIQTYLISQRYEGM 434
>gi|124024014|ref|YP_001018321.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9303]
gi|123964300|gb|ABM79056.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 439
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 265/413 (64%), Gaps = 9/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L RLGIYIP+ G++R AF L Q L+ LD F+GGGI LGI +
Sbjct: 24 LRGRVLTTLGLLLFIRLGIYIPMPGIDRVAFQSFLQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ++ L
Sbjct: 84 LGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFALI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + ++ V T L L GS ++ E I+D +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAVEGLSEVVFVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTV--AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-Q 319
T+ A+ G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRRLPIVSAKRQIGGTNLLPN 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL- 378
R +YLP K+N+ GVMPIIF+++ + LP T+A FT L +AA LNPG + P ++
Sbjct: 264 RQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPGAANPWPYALVF 323
Query: 379 --LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LI F+Y+Y L ++P D++ LKR G +IP VRPG +TA +L V +R+++LG +FL
Sbjct: 324 FALIVGFSYFYASLTINPIDIATNLKRGGVAIPGVRPGSATANYLSGVQNRLTLLGGLFL 383
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A PA +E+ T++ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 384 GAVAIIPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|434404997|ref|YP_007147882.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
gi|428259252|gb|AFZ25202.1| protein translocase subunit secY/sec61 alpha [Cylindrospermum
stagnale PCC 7417]
Length = 437
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 172/412 (41%), Positives = 260/412 (63%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G+NRE F + NS+ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGINRERFSEAISGNNSIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +VG+AIVQ++ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVGWAIVQSVAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFLATIIGIVFVQEGIRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
+YLP ++NS GVMPIIF+ + L+LP +A FT L L+P GS Y +
Sbjct: 263 SYLPLRLNSGGVMPIIFAAAILSLPLLIANFTKNPDLANIVNTYLSPSGSAPWVYALVYL 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++FL
Sbjct: 323 TSIVFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVTNRLTFLGAIFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E ++ F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVESGLNVPTFKGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|434391761|ref|YP_007126708.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
gi|428263602|gb|AFZ29548.1| protein translocase subunit secY/sec61 alpha [Gloeocapsa sp. PCC
7428]
Length = 437
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 267/410 (65%), Gaps = 10/410 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFV--GNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L +G L L+RLG+++P+ G+NR F N+L LD FSGGG+ LG+ +LG
Sbjct: 26 RLLVTVGILILARLGVFLPVPGINRALFAQASQSGNNALFGFLDIFSGGGLSTLGVFALG 85
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYL 205
I+P+INA I+ QLL P L++LQK EGEAGR+K+ Q TRY S+G+AI+Q+I +L
Sbjct: 86 ILPYINASIIIQLLTAAIPALENLQKNEGEAGRRKISQITRYVSLGWAILQSIFIAAFWL 145
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+PY + +V + LT GS F + E I++ +GNG SLLIF +I++ LP + G
Sbjct: 146 QPYAFNPGPIFVAQTAIALTAGSMFIMWASELITERGVGNGASLLIFVNIVASLPRALGD 205
Query: 266 TVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+A A Q G+ G+ +++ F+++++GIV+VQE R+IPI A R R ++ +
Sbjct: 206 TIAFA-QTGSREAVGGVVVLLLVFLVMIVGIVFVQEGTRRIPIISARRQVGRRFFQEQRS 264
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILL 379
YLP ++N GVMPIIF+++ L LP +LA FT L + A L+P G Y ++L
Sbjct: 265 YLPLRLNQGGVMPIIFASAVLILPASLASFTRNEFLLRIANYLSPNGPTPWVYALAYLVL 324
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+Y L ++P D+++ LK+ GA+IP +RPG++T+ +++ VL+R++ LG++FL ++
Sbjct: 325 ILFFSYFYATLIVNPVDLAQNLKKMGATIPGIRPGRATSEYVERVLNRLTFLGAIFLGLV 384
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P +E T + F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 385 AIVPTAVESATQVRTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|427417936|ref|ZP_18908119.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
7375]
gi|425760649|gb|EKV01502.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
7375]
Length = 440
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 254/397 (63%), Gaps = 12/397 (3%)
Query: 104 IYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQI 163
+YIP+ G++R AF +D LL LD F GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 42 MYIPVPGIDRVAFSQQVDAGGLLGFLDIFVGGGLSLLGIFALGILPYINASIIMQLLTAA 101
Query: 164 NPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA-IGQVLYLRPYVNDFSTDWVLTSVT 222
P+L+DLQK EGEAGR+K+ Q TRY ++G+A++Q+ + L P+ N+ +++ +
Sbjct: 102 IPQLEDLQKNEGEAGRRKISQITRYVAMGWAVLQSTLLASFLLSPFANEPGILFIVETAV 161
Query: 223 LLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR--TVAEAFQDGNYIGLA 280
LT GS F ++GE I++ +GNG SLLIF +I+S LP TVA++
Sbjct: 162 ALTAGSMFVMWVGELITERGVGNGASLLIFLNIVSSLPRLLNSAVTVAQSPTSSRQEVAG 221
Query: 281 TIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
I++S + L V+GIV+VQE R+IPI A R R L++S YLP ++N GVMPIIF
Sbjct: 222 IIVVSLVYLAMVVGIVFVQEGMRRIPIVSARRQVGRKLYLEKSNYLPLRLNQGGVMPIIF 281
Query: 339 STSSLALPGTLARFTGIAALKKAAVA------LNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+++ L LP A + + L ++ L+PG Y +++I FF+Y+Y L +
Sbjct: 282 ASAILVLPLQAAPYIA-STLSNPGISDFVNRFLSPGSPPYNLMYLVMILFFSYFYASLVV 340
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+D+S LK+ GASIP +RPGK+T+ F+ VL+R++ LG++FL ++A P+++E +
Sbjct: 341 DPEDMSRNLKKMGASIPGIRPGKATSDFIGKVLNRLTFLGALFLGVVAVVPSMVESGLRV 400
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 401 TVFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 437
>gi|352096503|ref|ZP_08957330.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
gi|351676153|gb|EHA59307.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8016]
Length = 439
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 270/413 (65%), Gaps = 9/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L L RLGIYIP+ G++R AF ++Q +L+ LD F+GGGI LG+ +
Sbjct: 24 LRGRVLTTLGLLMLVRLGIYIPMPGIDRVAFEQFIEQGGTLIGFLDIFTGGGISTLGVFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ VQ++ +
Sbjct: 84 LGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGTVQSVIFAMI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + +D V T L L GS ++ E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAVEGLSDVVFVVQTALALVTGSMIVMWLSEVITERGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTV--AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-Q 319
G T+ A+ G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LGSTIEKAQTGDRGDVVGIIVLVLVFLITIVGIIFVQEGARRLPIVSAKRQVGGTALLPS 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL- 378
R +YLP K+N+ GVMPIIF+++ + LP T+A T L +AA ALNPG + P I+
Sbjct: 264 RQSYLPLKLNAGGVMPIIFASALIFLPITIANVTNNPILIRAASALNPGAANPWPYAIVF 323
Query: 379 --LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LI F Y+Y+ L L+P D++ LKR G +IP VRPG +TAA+L+ V +R+++LG +FL
Sbjct: 324 FSLILGFAYFYSSLSLNPSDIATNLKRGGVAIPGVRPGSATAAYLEGVKNRLTLLGGLFL 383
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P+ +E+ T +T F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 384 GAVAIIPSAVERATGVTTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|427732031|ref|YP_007078268.1| protein translocase subunit SecY [Nostoc sp. PCC 7524]
gi|427367950|gb|AFY50671.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7524]
Length = 437
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 264/415 (63%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNR----EAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI++P+ G++R EA GN NS+ LD FSG G+ LG
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISGN---NSIFGLLDIFSGRGLSTLG 79
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
I +LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY ++G+ IVQ++
Sbjct: 80 IFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVALGWGIVQSVAF 139
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
L+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP
Sbjct: 140 SALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLP 199
Query: 261 ASFGRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S G T+ G I + +++ F+L ++GIV+VQE R+IPI A R R
Sbjct: 200 KSLGDTIDLVQVGGREIVGRVIVLVLVFMLTIVGIVFVQEGLRRIPIISARRQVGRRVLA 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLP 374
++ +YLP ++ S GVMPIIF+ + L+LP +A FT L L+PGGS Y
Sbjct: 260 EQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKNPELANIVNTYLSPGGSGSWVYAL 319
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
++ I FF+Y+Y+ L ++P D+++ LK+ G+SIP +RPGK+T+ +++ V++R+++LG+V
Sbjct: 320 VYLISIVFFSYFYSSLIINPVDIAQNLKKMGSSIPGIRPGKATSEYIERVINRLTLLGAV 379
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FL ++A P +E+ + FRG TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 380 FLGLVAIIPTAVERALGVPTFRGLGATSLLILVGVAIETAKQVQTYVISQRYEGM 434
>gi|427736163|ref|YP_007055707.1| protein translocase subunit SecY [Rivularia sp. PCC 7116]
gi|427371204|gb|AFY55160.1| protein translocase subunit secY/sec61 alpha [Rivularia sp. PCC
7116]
Length = 437
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 264/412 (64%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-NSLLSTLDSFSGGGIGRLGICS 144
L G+ +G L L RLGIYIP+ G++R F + Q N L LD FSGGG LG+ +
Sbjct: 23 LRGRLFVTIGILLLIRLGIYIPIPGIDRVRFSAAMSQGNGLAGILDIFSGGGFSALGVFT 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L+ LQK EGEAGR+K+ Q TRY ++G+AIVQ+I +
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLEKLQKDEGEAGRRKISQITRYVALGWAIVQSIFISSV 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + DF +V + L GS F + E I++ +GNG SLLIF +I+S LP +
Sbjct: 143 WLKNFALDFGPIFVFETALALVAGSMFVMWASEVITERGIGNGASLLIFLNIVSSLPTTL 202
Query: 264 GRTVAEAFQDG-NYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T++ A G +G + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GSTISFAQVGGREAVGQVVVLLLLFLATIIGIVFVQEGMRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILL- 379
++LP ++N GVMPIIF+T+ L+LP + FT + + LNPGGS + ++
Sbjct: 263 SFLPLRLNQGGVMPIIFATAILSLPLLIGNFTQNQQIANFTSTYLNPGGSGWWAYALIYL 322
Query: 380 --IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
I FF+Y+Y+ L ++P D+++ LK+ G+SIP +RPGK+T+ +L+ VL+R++ LG+ FL
Sbjct: 323 FSIIFFSYFYSSLIVNPVDIAQNLKKMGSSIPGIRPGKATSEYLERVLNRLTFLGAGFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P V+E+ ++ FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 383 LVAIIPTVVERVLNVPTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|282899970|ref|ZP_06307931.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
gi|281195240|gb|EFA70176.1| SecY protein [Cylindrospermopsis raciborskii CS-505]
Length = 437
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 259/412 (62%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G+NRE F + N++ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGINRERFAEAISGNNAIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY S+G+ I+Q+ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVSLGWGILQSTAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFVATIIGIVFVQEGIRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
++LP ++N GVMPIIF+ + L+LP +A FT L L+P GS Y +
Sbjct: 263 SFLPLRLNQGGVMPIIFAAAILSLPLLIANFTKNVELANIVNTYLSPSGSSSWVYALVYM 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++FL
Sbjct: 323 VSIIFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVSNRLTFLGAMFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E T ++ FRG TS+LILVG A DTAR++Q +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVESTLNVPTFRGLGATSLLILVGVAIDTARQIQTYVISQRYEGM 434
>gi|282898339|ref|ZP_06306330.1| SecY protein [Raphidiopsis brookii D9]
gi|281196870|gb|EFA71775.1| SecY protein [Raphidiopsis brookii D9]
Length = 437
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 260/412 (63%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G++RE F + N++ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRERFAQAISGNNAIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY S+G+AI+Q+ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVSLGWAILQSTAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFVATIIGIVFVQEGIRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
++LP ++N GVMPIIF+ + L+LP +A FT L L+P GS Y +
Sbjct: 263 SFLPLRLNQGGVMPIIFAAAILSLPLLIANFTKNVELANIVNTYLSPSGSSSWVYALVYM 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++FL
Sbjct: 323 VSIIFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVSNRLTFLGAMFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E T ++ FRG TS+LILVG A DTAR++Q +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVESTLNVPTFRGLGATSLLILVGVAIDTARQIQTYVISQRYEGM 434
>gi|33864017|ref|NP_895577.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9313]
gi|33635601|emb|CAE21925.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 439
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/413 (42%), Positives = 264/413 (63%), Gaps = 9/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L RLGIYIP+ G++R AF L Q L+ LD F+GGGI LGI +
Sbjct: 24 LRGRVLTTLGLLLFIRLGIYIPMPGIDRVAFQSFLQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ++ L
Sbjct: 84 LGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVIFALI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + ++ V T L L GS ++ E I+D +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAVEGLSEVVFVVQTALALVTGSMIVMWMSEIITDRGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTV--AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-Q 319
T+ A+ G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LASTIEKAQTGDRGDVVGIIVLVMVFLMTIVGIIFVQEGSRRLPIVSAKRQIGGTNLLPN 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL- 378
R +YLP K+N+ GVMPIIF+++ + LP T+A FT L +AA LNP + P ++
Sbjct: 264 RQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIRAASTLNPSAANPWPYALVF 323
Query: 379 --LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LI F+Y+Y L ++P D++ LKR G +IP VRPG +TA +L V +R+++LG +FL
Sbjct: 324 FALIVGFSYFYASLTINPIDIATNLKRGGVAIPGVRPGSATANYLSGVQNRLTLLGGLFL 383
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A PA +E+ T++ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 384 GAVAIIPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|149072026|ref|YP_001293597.1| preprotein translocase subunit SecY [Rhodomonas salina]
gi|134302977|gb|ABO70781.1| preprotein translocase subunit SecY [Rhodomonas salina]
Length = 420
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 250/393 (63%), Gaps = 4/393 (1%)
Query: 100 SRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
SRLG +IP+ GV+ +AF ++ N +++ L+ FSGGG +GI +LGIVP+INA I+ QL
Sbjct: 27 SRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSGGGFASIGIFALGIVPYINASIIIQL 86
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLT 219
P L+ LQK EGEAGR+K+ Q TRY ++G+A +Q+IG ++RPYV ++ +V+
Sbjct: 87 ATTSIPSLEKLQKEEGEAGRQKISQITRYIALGWAAIQSIGVSFWVRPYVFNWDAQFVIE 146
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL 279
LT GS + E+I++ +GNG SLLIF +II+ LP + + L
Sbjct: 147 MTLALTTGSMLIMWFSEQITEKGIGNGPSLLIFINIIAGLPKLIQQKSGSVGTNTQITEL 206
Query: 280 ATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFS 339
+ F+++++GI+++QE R+IPI ++R + +++YLP ++N GVMPIIF+
Sbjct: 207 FVLASIFLIMIVGIIFIQEGTRRIPI-ISARQLGKGQSQNKTSYLPLRLNQGGVMPIIFA 265
Query: 340 TSSLALPGTLARFTGIAALKKAAVALNPGG---SFYLPTNILLIAFFNYYYTFLQLDPDD 396
++ L LP L + L L+P + YL LI FF+Y+Y L ++P+D
Sbjct: 266 SAILVLPAYLGQIVKNQFLLNILNLLSPTSGDKNLYLIFYFSLILFFSYFYASLIINPND 325
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
VS+ LK+ +SIP VRPGK+T +L+ L+R++ LG++FLA +A P++IE T+++ F+
Sbjct: 326 VSQNLKKMESSIPGVRPGKATTDYLQKTLNRLTFLGALFLAFIAVIPSIIENVTNISTFK 385
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G TS+LILVG A DT+R++Q +IS+ Y+NI
Sbjct: 386 GLGATSLLILVGVAIDTSRQIQTYLISRNYENI 418
>gi|119511161|ref|ZP_01630278.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
gi|119464149|gb|EAW45069.1| preprotein translocase SecY [Nodularia spumigena CCY9414]
Length = 437
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 274/444 (61%), Gaps = 25/444 (5%)
Query: 58 REKSSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNR---- 113
REK+ +A+ M ++ L G+ L +G L L RLGI++P+ G++R
Sbjct: 4 REKAPTAQETFMQMAQAA---------GLRGRLLVTVGILILVRLGIFLPVPGLDRARFA 54
Query: 114 EAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKR 173
EA GN N++ LD FSG G+ LGI +LGI+PFINA I+ QLL P L++LQK
Sbjct: 55 EAIAGN---NAVFGLLDIFSGRGLSTLGIFALGILPFINASIIIQLLTAAIPSLENLQKN 111
Query: 174 EGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTT 232
EGE GR+K+ Q TRY +V +A +Q++ ++L+ + + +VL + LT GS F
Sbjct: 112 EGEQGRRKISQITRYVTVVWATIQSVAFSAIFLKQFALNPGIPFVLETAIALTAGSMFVM 171
Query: 233 YIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIG-LATIIISFILL 289
+ E I++ LGNG SLLIF +I++ LP + G T+ + Q G IG + +I+ F++
Sbjct: 172 WASELITERGLGNGASLLIFVNIVASLPKALGDTI-DLVQVGGRETIGRVIVLILVFLVT 230
Query: 290 VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
++GIV+VQE R+IPI A R R ++ +YLP ++NS GVMPIIF+ + L+LP +
Sbjct: 231 IVGIVFVQEGIRRIPIISARRQVGRRVLAEQRSYLPLRLNSGGVMPIIFAAAILSLPLLI 290
Query: 350 ARFTGIAALKKAA-VALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQG 405
A FT + L+PGGS Y ++ I FF+Y+Y+ L ++P DV++ LK+ G
Sbjct: 291 ANFTRNTEIANIVNTYLSPGGSGAWVYALVYLVSIVFFSYFYSSLIVNPVDVAQNLKKMG 350
Query: 406 ASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLI 465
+SIP +RPGK+T+ +L+ V++R++ LG++FL +A P +E + FRG TS+LI
Sbjct: 351 SSIPGIRPGKATSEYLERVINRLTFLGAIFLGFVAIIPTAVESALGVPTFRGLGATSLLI 410
Query: 466 LVGCATDTARKVQAEIISQKYKNI 489
LVG A DTA++VQ +ISQ+Y+ +
Sbjct: 411 LVGVAIDTAKQVQTYVISQRYEGM 434
>gi|427718738|ref|YP_007066732.1| protein translocase subunit SecY [Calothrix sp. PCC 7507]
gi|427351174|gb|AFY33898.1| protein translocase subunit secY/sec61 alpha [Calothrix sp. PCC
7507]
Length = 437
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/415 (41%), Positives = 261/415 (62%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNR----EAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI++P+ G+NR EA GN NS+ LD FSG G+ LG
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGINRDRFHEAISGN---NSIFGLLDIFSGRGLSTLG 79
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
+ +LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +VG+AI+Q+
Sbjct: 80 VFALGILPFINASIIIQLLTAALPSLENLQKNEGEAGRRKISQITRYVTVGWAIIQSTAF 139
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
L+L+ + + +V + LT GS F + E +++ +GNG SLLIF +I++ LP
Sbjct: 140 SALFLQQFALEPGPIFVAETAIALTAGSMFVMWASELVTERGIGNGASLLIFVNIVASLP 199
Query: 261 ASFGRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R
Sbjct: 200 KSLGDTIDLVQVGGREIVGRVIVLVLVFLFTIVGIVFVQEGIRRIPIISARRQVGRRVLA 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGS---FYLP 374
++ +YLP ++N+ GVMPIIF+ + L+LP +A FT L L+PGGS Y
Sbjct: 260 EQRSYLPLRLNAGGVMPIIFAAAILSLPLLIANFTKNPELANIVNNYLSPGGSQAWAYAL 319
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
++ I FF+Y+Y+ L ++P DV++ LK+ G+SIP +RPGK+T+ +++ V++R++ LG++
Sbjct: 320 VYLISIVFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVINRLTFLGAI 379
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FL +A P +E + F+G TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 380 FLGFVAIIPTAVESALGVPTFKGLGATSLLILVGVAIETAKQVQTYVISQRYEGM 434
>gi|218440641|ref|YP_002378970.1| preprotein translocase subunit SecY [Cyanothece sp. PCC 7424]
gi|218173369|gb|ACK72102.1| preprotein translocase, SecY subunit [Cyanothece sp. PCC 7424]
Length = 439
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 258/399 (64%), Gaps = 11/399 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++R F + + L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGIFIPVPGLDRARFSDFIQNSPALGILDIFTGGGLSTLGIFALGILPYINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW--VL 218
P L+DLQK EGEAGR+K+ Q TRY ++G+AI+Q+ G L L S +L
Sbjct: 99 TAAIPSLEDLQKNEGEAGRRKISQITRYVALGWAIIQSFGITLGLLVANGVISGGILPIL 158
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG 278
+V LT GS F +I E I++ +GNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ETVLALTAGSMFVMWISELITERGIGNGASLLIFVNIVAVLPKTLGNTIDYA-QTGGRQA 217
Query: 279 LATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+A ++I F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMP
Sbjct: 218 VAQVVILLLVFLIMIVGIVFVQEGTRRIPIISARRQVGRRLYRERTSYLPLRLNQGGVMP 277
Query: 336 IIFSTSSLALPGTLAR-FTGIAALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFL 390
IIF+++ L LP LAR +G + + + L PG Y+ LLI FF+++Y L
Sbjct: 278 IIFASAVLILPFQLARSVSGEGTVSQILIQVVNYLQPGSWIYVVFYSLLIFFFSFFYASL 337
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
++P D+S+ LK+ GASIP +RPG +T+ +L+ VL+R++ LG++FL+I+A P ++E T
Sbjct: 338 IVNPKDMSQNLKKMGASIPGIRPGTATSNYLEGVLNRLTFLGAIFLSIVATVPTLVEGAT 397
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 398 GVTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|148238752|ref|YP_001224139.1| preprotein translocase subunit SecY [Synechococcus sp. WH 7803]
gi|147847291|emb|CAK22842.1| Preprotein translocase SecY subunit [Synechococcus sp. WH 7803]
Length = 439
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/414 (43%), Positives = 267/414 (64%), Gaps = 11/414 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICS 144
L + L LG L L RLGIYIP+ G++R AF + Q L+ LD F+GGGI LGI +
Sbjct: 24 LRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ +
Sbjct: 84 LGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVIFAVI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LRPY + +D V + T L L GS +I E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRPYALEGLSDAVFITQTALALVTGSMIVMWISEVITERGIGQGASLVIFLNIVATLPQA 203
Query: 263 FGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL- 318
G T+ +A Q G+ G+ +++ F++ ++GI++VQE R++PI A R S L
Sbjct: 204 LGSTIEKA-QTGDRNDVFGIIVLVLVFLVTIVGIIFVQEGARRLPIVSAKRQVGGSALLP 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
R +YLP K+N+ GVMPIIF+++ + LP T+A F+ L AA ALNP S P +L
Sbjct: 263 NRQSYLPLKLNAGGVMPIIFASALIFLPITIANFSQNPLLITAASALNPSASNPWPYALL 322
Query: 379 ---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI F+Y+Y L +P +V+ LKR G +IP VRPG +TA +L+ V +R+++LG +F
Sbjct: 323 FFSLILGFSYFYASLTFNPTEVATNLKRGGVAIPGVRPGSATATYLEGVKNRLTLLGGLF 382
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L +A P+ +E+ T +T F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 LGAVAIIPSAVERATSVTTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>gi|427726125|ref|YP_007073402.1| protein translocase subunit SecY [Leptolyngbya sp. PCC 7376]
gi|427357845|gb|AFY40568.1| protein translocase subunit secY/sec61 alpha [Leptolyngbya sp. PCC
7376]
Length = 438
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 253/393 (64%), Gaps = 8/393 (2%)
Query: 105 YIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIN 164
+IP+ G++R A + + L LD F+GGG+ +GI +LGI+P+INA I+ QL+
Sbjct: 43 FIPIPGIDRTALSAGIQNSPFLGFLDVFAGGGLSAVGIFALGILPYINASIIMQLMTAAI 102
Query: 165 PKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLTSVTL 223
P L+D+QK +GEAGR+K+ Q RY +VG+A +Q+ G L LRPY D +VL +
Sbjct: 103 PALEDMQKNDGEAGRRKISQIIRYVTVGWAALQSFGITLQILRPYAVDPGFTFVLETTLA 162
Query: 224 LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI--GLAT 281
LT GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A G + +
Sbjct: 163 LTAGSVFVMWISELITEKGLGNGASLLIFVNIVAVLPRTLGNTIEFAQAGGRAVIAKVIL 222
Query: 282 IIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTS 341
+++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPIIF+++
Sbjct: 223 LLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASA 282
Query: 342 SLALPGTLARF-TGIAALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDD 396
L LP +L +G L V L PG Y+ + LI FF+Y+Y L ++P D
Sbjct: 283 VLVLPSSLVGLASGEGTLSNILVGVTNFLQPGRIPYVIVYLTLILFFSYFYASLIVNPVD 342
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
+S+ LK+ G+SIP +RPG++T+ +L+ V++R+++LG++FL ++A P +E T +T +
Sbjct: 343 MSQNLKKMGSSIPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVTTLQ 402
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GF TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 403 GFGATSLLILVGVAIDTAKQIQTYVISQRYEGM 435
>gi|414076527|ref|YP_006995845.1| preprotein translocase subunit SecY [Anabaena sp. 90]
gi|413969943|gb|AFW94032.1| preprotein translocase subunit SecY [Anabaena sp. 90]
Length = 437
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 258/415 (62%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNR----EAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI++P+ G++R EA GN NS+ LD FSG G+ LG
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRPKFAEAISGN---NSIFGLLDIFSGRGLSTLG 79
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
+ +LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +V +AI+Q++
Sbjct: 80 VFALGILPFINASIIIQLLTSALPSLENLQKNEGEAGRRKISQITRYVTVIWAIIQSVAF 139
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
L+L+ + +V + LT GS F + E I++ +GNG SLLIF +I++ LP
Sbjct: 140 SALFLQQFAKTPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLP 199
Query: 261 ASFGRTVAEAFQDGNYIGLATIIIS--FILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S G T+ G I I++ F+ ++GIV+VQE R+IPI A R R
Sbjct: 200 KSLGDTIDLVQVGGREIVGRVIVLVVVFMFTIVGIVFVQEGMRRIPIISARRQVGRRVLA 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLP 374
++ +YLP ++NS GVMPIIF+ + L+LP +A FT L L+PGGS Y
Sbjct: 260 EQRSYLPLRLNSGGVMPIIFAAAILSLPLLVANFTKNPELANIVNTYLSPGGSAPWVYAL 319
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++
Sbjct: 320 VYLTSIVFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVTNRLTFLGAI 379
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FL ++A P +E + F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 380 FLGLVAIIPTAVESALKVPTFKGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|88807903|ref|ZP_01123414.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
gi|88787942|gb|EAR19098.1| preprotein translocase SecY [Synechococcus sp. WH 7805]
Length = 439
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/414 (43%), Positives = 267/414 (64%), Gaps = 11/414 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICS 144
L + L LG L L RLGIYIP+ G++R AF + Q L+ LD F+GGGI LGI +
Sbjct: 24 LRNRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ +
Sbjct: 84 LGILPFINASIILQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVIFAVI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LRPY + +D V + T L L GS +I E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRPYALEGLSDGVFITQTALALVTGSMIVMWISEVITERGIGQGASLVIFLNIVATLPQA 203
Query: 263 FGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL- 318
G T+ +A Q G+ G+ +++ F++ ++GI++VQE R++PI A R S L
Sbjct: 204 LGSTIEKA-QTGDRSDVFGIIVLVLVFLVTIVGIIFVQEGARRLPIVSAKRQVGGSALLP 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
R +YLP K+N+ GVMPIIF+++ + LP T+A F+ L AA ALNP S P +L
Sbjct: 263 NRQSYLPLKLNAGGVMPIIFASALIFLPITIANFSQNPLLITAASALNPSASNPWPYALL 322
Query: 379 ---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI F+Y+Y L +P +V+ LKR G +IP VRPG +TA +L+ V +R+++LG +F
Sbjct: 323 FFSLILGFSYFYASLTFNPTEVATNLKRGGVAIPGVRPGSATANYLEGVKNRLTLLGGLF 382
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L +A P+ +E+ T +T F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 LGAVAIIPSAVERATSVTTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>gi|17231689|ref|NP_488237.1| preprotein translocase subunit SecY [Nostoc sp. PCC 7120]
gi|17133332|dbj|BAB75896.1| preprotein translocase SecY subunit [Nostoc sp. PCC 7120]
Length = 437
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 259/412 (62%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G++R F + N++ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +VG+AI Q++ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVGWAIFQSVAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFLATIVGIVFVQEGIRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
+YLP ++ S GVMPIIF+ + L+LP +A FT L L+PGGS Y +
Sbjct: 263 SYLPLRLISGGVMPIIFAAAILSLPLLIANFTKNPELANIVNTYLSPGGSGSWVYALVYL 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ I FF+Y+Y+ L ++P DV++ LK+ G+SIP +RPGK+T+ +++ V++R++ LG++FL
Sbjct: 323 ISIVFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVINRLTFLGAIFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E+ + FRG TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVERALGVPTFRGLGATSLLILVGVAIETAKQVQTYVISQRYEGM 434
>gi|75906932|ref|YP_321228.1| preprotein translocase subunit SecY [Anabaena variabilis ATCC
29413]
gi|75700657|gb|ABA20333.1| protein translocase subunit secY/sec61 alpha [Anabaena variabilis
ATCC 29413]
Length = 437
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 259/412 (62%), Gaps = 8/412 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G++R F + N++ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSNNAIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +VG+AI Q++ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVGWAIFQSLAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + +V + LT GS F + E I++ +GNG SLLIF +I++ LP S
Sbjct: 143 FLQQFALQPGPVFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKSL 202
Query: 264 GRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ G I + +++ F+ ++GIV+VQE R+IPI A R R ++
Sbjct: 203 GDTIDLVQVGGREIVGRVIVLVLVFLATIVGIVFVQEGIRRIPIISARRQVGRRVLAEQR 262
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTNI 377
+YLP ++ S GVMPIIF+ + L+LP +A FT L L+PGGS Y +
Sbjct: 263 SYLPLRLISGGVMPIIFAAAILSLPLLIANFTKNPELANIVNTYLSPGGSGSWVYALVYL 322
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ I FF+Y+Y+ L ++P DV++ LK+ G+SIP +RPGK+T+ +++ V++R++ LG++FL
Sbjct: 323 ISIVFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVINRLTFLGAIFLG 382
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E+ + FRG TS+LILVG A +TA++VQ +ISQ+Y+ +
Sbjct: 383 LVAIIPTAVERALGVPTFRGLGATSLLILVGVAIETAKQVQTYVISQRYEGM 434
>gi|78211910|ref|YP_380689.1| preprotein translocase subunit SecY [Synechococcus sp. CC9605]
gi|78196369|gb|ABB34134.1| SecY protein [Synechococcus sp. CC9605]
Length = 439
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 259/396 (65%), Gaps = 11/396 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++REAF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTS 220
P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ++ + LR Y + ++ +V+ +
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSEVTFVVQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YI 277
L GS ++ E I++ +G G SL+IF +I++ LP + G T+ EA Q G+ +
Sbjct: 162 ALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATI-EAAQTGDRDTVL 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPI 336
G+ +++ F+ ++GI++VQE R+IPI A R G L R +YLP K+N+ GVMPI
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGPGVLPTRQSYLPLKLNAGGVMPI 280
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLD 393
IF+++ + LP T+A T L +AA ALNPG + P T LI F+Y+Y+ L ++
Sbjct: 281 IFASALIFLPVTIANLTKSEWLIRAASALNPGAANPWPYALTFFALILGFSYFYSSLTVN 340
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P D++ LKR G +IP VRPG +TA +L V +R+++LG +FL +A PA +E+ T++
Sbjct: 341 PSDIATNLKRGGVAIPGVRPGSATATYLSGVQNRLTLLGGLFLGAVAIIPAAVERATNVQ 400
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 401 TFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|260435196|ref|ZP_05789166.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
gi|260413070|gb|EEX06366.1| preprotein translocase, SecY subunit [Synechococcus sp. WH 8109]
Length = 439
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 259/396 (65%), Gaps = 11/396 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++REAF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTS 220
P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ++ + LR Y + ++ +V+ +
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQSVVFAMILRQYAVEGLSEVAFVVQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YI 277
L GS ++ E I++ +G G SL+IF +I++ LP + G T+ EA Q G+ +
Sbjct: 162 ALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPRTLGATI-EAAQTGDRDTVL 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPI 336
G+ +++ F+ ++GI++VQE R+IPI A R +G L R +YLP K+N+ GVMPI
Sbjct: 221 GIIVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGAGVLPTRQSYLPLKLNAGGVMPI 280
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLD 393
IF+++ + LP T+A T L +AA ALNPG + P T LI F+Y+Y L ++
Sbjct: 281 IFASALIFLPVTIANLTKSEWLIRAASALNPGAANPWPYALTFFALILGFSYFYASLTVN 340
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P D++ LKR G +IP VRPG +TA +L V +R+++LG +FL +A PA +E+ T++
Sbjct: 341 PADIATNLKRGGVAIPGVRPGSATATYLSGVQNRLTLLGGLFLGAVAIIPAAVERATNVQ 400
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 401 TFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|194477040|ref|YP_002049219.1| preprotein translocase SecY [Paulinella chromatophora]
gi|171192047|gb|ACB43009.1| preprotein translocase SecY [Paulinella chromatophora]
Length = 438
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 254/411 (61%), Gaps = 11/411 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGI 147
+ + +G L + RLGIYIP+ G++R AF L+Q L+ LD F+GGG+ LGI +LGI
Sbjct: 27 RVITTIGLLLIIRLGIYIPVPGIDRVAFQAFLNQGGQLIGFLDIFTGGGLSTLGIFALGI 86
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+PFINA I+ QLL + P+L DLQK EGEAGR+KV Q TRY + G+ ++Q+ LRP
Sbjct: 87 LPFINASIIIQLLTTVLPQLDDLQKNEGEAGRRKVSQITRYLAFGWGLLQSTVFAFILRP 146
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
Y + +V+ + L GS +I E I+D +G G SL+IF +I++ LP + G
Sbjct: 147 YAMSGLSQPIFVIQTALALVTGSIVVMWISEVITDRGIGQGASLVIFLNIVATLPRALGS 206
Query: 266 TVAEAFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRS 321
T+ E Q G+ LA II+ F++ +LGI++VQE R+IPI A R ++ L R
Sbjct: 207 TL-ELVQTGDRHTLAGIIVLALVFLITILGIIFVQEGSRRIPIISAKRQIEKTNLLTSRQ 265
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNIL 378
+YLP K+N+ GVMPIIF+++ + LP T+A T L A LNP + Y
Sbjct: 266 SYLPLKLNAGGVMPIIFASALVFLPLTIANITKAPWLIIVASYLNPNSNTPWLYALLFFS 325
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI F+++YT L ++P D++ LKR G +IP VRPG +T ++ V +R+++LG VFL
Sbjct: 326 LILGFSFFYTSLTINPTDIAVNLKRGGVAIPGVRPGSATIKYIGGVQNRLTLLGGVFLGA 385
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A PA +E T + F+G TS+LILVG A DTA++ Q +ISQ+Y+ +
Sbjct: 386 VAIIPAAVEGATQIRTFQGLGATSLLILVGVAIDTAKQFQTYVISQRYERM 436
>gi|33241143|ref|NP_876085.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238673|gb|AAQ00738.1| Preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 439
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 263/414 (63%), Gaps = 11/414 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L RLGIYIP+ G++REAF + Q L+ LD F+GGGI LGI +
Sbjct: 24 LRGRVLITLGMLLFVRLGIYIPVPGIDREAFKEFIQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ L
Sbjct: 84 LGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKISQITRYVALGWGLMQSLVFALI 143
Query: 205 LRPY-VNDFS-TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + S T +V + L GS ++ E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAIESLSETAFVFQTAIALVTGSMIVMWLSEIITEKGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL- 318
T+ +A Q G+ G+ ++I F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LSSTIEKA-QTGDRNDVFGIIVLLIVFLITIVGIIFVQEGARRLPIVSAKRQIGGTALLP 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
R +YLP K+N+ GVMPIIF+++ + LP T+A FT L +AA ALNP + P I
Sbjct: 263 TRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPLLIQAASALNPSSANPWPYAIT 322
Query: 379 LIAF---FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
A F Y+Y L ++P D++ LKR G +IP VRPG +T+ +L V +R+++LG +F
Sbjct: 323 FFALILGFAYFYASLTINPIDIAANLKRGGVAIPGVRPGSATSKYLSGVQNRLTLLGGLF 382
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L +A PA +E+ T++ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 LGSVAIVPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|440683424|ref|YP_007158219.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
gi|428680543|gb|AFZ59309.1| protein translocase subunit secY/sec61 alpha [Anabaena cylindrica
PCC 7122]
Length = 437
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 261/415 (62%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNR----EAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI++P+ G+NR EA GN NS+ LD FSG G+ LG
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPIPGINRVRFAEAISGN---NSVFGLLDIFSGRGLSTLG 79
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
I +LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +VG+AI+Q++
Sbjct: 80 IFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVGWAIIQSVAF 139
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
L+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP
Sbjct: 140 SALFLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLP 199
Query: 261 ASFGRTVAEAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S G T+ G I + +++ F+L ++GIV+VQE R+IPI A R R
Sbjct: 200 KSLGDTIDLVQVGGREIVGRVIVLVLVFLLTIVGIVFVQEGLRRIPIISARRQVGRRVLA 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLP 374
++ +YLP ++NS GVMPIIF+ + L+LP +A FT L L+P GS Y
Sbjct: 260 EQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFTKNPDLANIVNTYLSPSGSAPWVYAL 319
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++
Sbjct: 320 VYLTSIVFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVANRLTFLGAI 379
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FL ++A P +E + F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 380 FLGLVAIIPTAVESALKVPTFKGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 434
>gi|427707972|ref|YP_007050349.1| protein translocase subunit SecY [Nostoc sp. PCC 7107]
gi|427360477|gb|AFY43199.1| protein translocase subunit secY/sec61 alpha [Nostoc sp. PCC 7107]
Length = 437
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/415 (41%), Positives = 257/415 (61%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNR----EAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI++P+ G++R EA GN NS+ LD FSG G+ LG
Sbjct: 23 LRGRLLVTVGILILVRLGIFLPVPGIDRTRFHEAISGN---NSIFGLLDIFSGRGLSTLG 79
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
+ +LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +V +AI+Q+
Sbjct: 80 VFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVCWAIIQSTAF 139
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+L+ + +V + LT GS F + E I++ +GNG SLLIF +I++ LP
Sbjct: 140 SAFFLQQFALTPGPVFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLP 199
Query: 261 ASFGRTVAEAFQDGNYIGLATIIIS--FILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S G T+ G I I++ F+ ++GIV+VQE R+IPI A R R
Sbjct: 200 KSLGDTIDLVQVGGREIVGRVIVLVVVFLATIVGIVFVQEGIRRIPIISARRQVGRRVLA 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLP 374
++ +YLP ++NS GVMPIIF+ + L+LP +A FT L L+PGGS Y
Sbjct: 260 EQRSYLPLRLNSGGVMPIIFAAAILSLPLLIANFTKNPELANIVNTYLSPGGSAPWVYAL 319
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+Y+Y+ L ++P DV++ LK+ G+SIP +RPGK+T+ +++ V++R++ LG++
Sbjct: 320 VYLTSIVFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVINRLTFLGAI 379
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FL ++A P +E + F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 380 FLGLVAIIPTAVESALKVPTFKGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 434
>gi|148243233|ref|YP_001228390.1| preprotein translocase subunit SecY [Synechococcus sp. RCC307]
gi|147851543|emb|CAK29037.1| Preprotein translocase SecY subunit [Synechococcus sp. RCC307]
Length = 439
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 248/395 (62%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++REAF + Q L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPIPGIDREAFQQFIQQGGQLIGFLDIFTGGGISALGIFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
P L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q+I + LRPY + V + T
Sbjct: 102 ALPSLEDLQKNEGEAGRRKIAQITRYVALGWGVLQSIVFAMILRPYALESVPQVVFVAQT 161
Query: 223 LLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L L GS +I E I++ +G G SL+IF +I++ LP + G TV A++ G G
Sbjct: 162 ALALVTGSMVVMWISEVITERGIGQGASLVIFLNIVATLPRALGSTVELAQSGDRGTIAG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+ +++ F++ +LGIV VQE R+IPI A R L +R +YLP K+N+ GVMPII
Sbjct: 222 IIVLVLVFLITILGIVCVQEGSRRIPIVSAKRQVGAGAMLPERQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A T L + A LNP S Y LI F+++Y L ++P
Sbjct: 282 FASAVIFLPLTIANLTKSELLVRVAGYLNPNSSTPWLYALVFFGLICGFSFFYATLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
D++ LK+ G ++P VRPG +TA +L V +R+++LG +FL +A PA +E T++
Sbjct: 342 QDIASNLKKGGVAVPGVRPGTATAKYLGGVQNRLTLLGGIFLGAVAIIPAAVEGATNVKT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>gi|11467734|ref|NP_050786.1| preprotein translocase subunit SecY [Guillardia theta]
gi|1351058|sp|P28527.2|SECY_GUITH RecName: Full=Protein translocase subunit SecY
gi|81182|pir||S20577 preprotein translocase secY - Cryptomonas sp. chloroplast
gi|3603059|gb|AAC35720.1| SecY-type transporter protein (chloroplast) [Guillardia theta]
Length = 420
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 260/411 (63%), Gaps = 6/411 (1%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L + +SRLG ++P+ GV+ +AF ++ N L++ L+ FSGGG +G+
Sbjct: 10 KQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIISNPLVNFLNVFSGGGFASIGV 69
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+INA I+ QL P L+ LQK EGE GR+K++Q TRY ++ +A++Q+IG
Sbjct: 70 FALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVALVWALIQSIGVS 129
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++RPYV ++ ++V LT+GS + E+I++ +GNG SLLIF +IIS LP
Sbjct: 130 FWVRPYVFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPSLLIFINIISGLPKL 189
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + + + ++ F ++++GI+++QE ++IPI ++R + +++
Sbjct: 190 LQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGIKRIPI-ISARQLGKGQMDNKTS 248
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS----FYLPTNIL 378
YLP K+N SGVMPIIF+++ L LP LA+ L + + L G S YL
Sbjct: 249 YLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSNEQL-RTVLHLFDGTSNNKLLYLLFYFT 307
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI FF+Y+YT L L+P+DVS+ LK+ +SI VRPGK+T +L+ L+R++ LG++FLA
Sbjct: 308 LILFFSYFYTSLILNPNDVSKNLKKMESSIYGVRPGKATTEYLQKTLNRLTFLGALFLAF 367
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P +IE T+L+ F+G GTS+LI+VG DT++++Q +IS+ Y+ I
Sbjct: 368 IAIVPNIIETLTNLSVFKGLGGTSLLIIVGVQVDTSKQIQTYLISKNYETI 418
>gi|166368466|ref|YP_001660739.1| preprotein translocase subunit SecY [Microcystis aeruginosa
NIES-843]
gi|425465075|ref|ZP_18844385.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9809]
gi|166090839|dbj|BAG05547.1| preprotein translocase SecY subunit [Microcystis aeruginosa
NIES-843]
gi|389832727|emb|CCI23379.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9809]
Length = 439
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 255/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPS 156
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 216
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 217 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 276
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 277 PIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 336
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ GASIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E
Sbjct: 337 LIVNPKDMSQNLKKMGASIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA 396
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 397 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 436
>gi|159904201|ref|YP_001551545.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9211]
gi|159889377|gb|ABX09591.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 439
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/414 (42%), Positives = 266/414 (64%), Gaps = 11/414 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L G+ L LG L L RLGIYIP+ G++REAF + Q L+ LD F+GGGI LGI +
Sbjct: 24 LRGRVLITLGMLLLVRLGIYIPVPGIDREAFKEFIQQGGQLIGFLDIFTGGGISTLGIFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ L
Sbjct: 84 LGILPFINASIIIQLLTAALPQLEDLQKNEGEAGRRKIAQITRYLALGWGLMQSLVFALI 143
Query: 205 LRPY-VNDFS-TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + S +V + L GS ++ E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRQYSIESLSEVSFVFQTAIALVTGSMIVMWLSEIITERGIGQGASLVIFLNIVATLPKA 203
Query: 263 FGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL- 318
T+ +A Q G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LSSTIEKA-QTGDRNDVVGIIVLLVVFLITIVGIIFVQEGARRLPIVSAKRQIGGTALLP 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---T 375
R +YLP K+N+ GVMPIIF+++ + LP T+A FT L +AA ALNP S P T
Sbjct: 263 NRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTKNPFLIRAAGALNPSASNPWPYALT 322
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI F Y+Y L ++P D++ LKR G +IP VRPG +T+ +L +V +R+++LG +F
Sbjct: 323 FFALILGFAYFYASLTINPIDIAANLKRGGVAIPGVRPGSATSKYLSSVQNRLTLLGGLF 382
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L +A PA +E+ T++ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 LGSVAIVPAAVERATNVQTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|390438076|ref|ZP_10226574.1| Preprotein translocase secY subunit [Microcystis sp. T1-4]
gi|389838476|emb|CCI30698.1| Preprotein translocase secY subunit [Microcystis sp. T1-4]
Length = 439
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 254/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYVAFGWAIIQSIGITLGL--LVANGVVAGTLPS 156
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 216
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 217 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 276
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 277 PIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 336
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E
Sbjct: 337 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA 396
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 397 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 436
>gi|186684492|ref|YP_001867688.1| preprotein translocase subunit SecY [Nostoc punctiforme PCC 73102]
gi|186466944|gb|ACC82745.1| preprotein translocase, SecY subunit [Nostoc punctiforme PCC 73102]
Length = 437
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/413 (40%), Positives = 258/413 (62%), Gaps = 10/413 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGGGIGRLGICS 144
L G+ L +G L L RLGI++P+ G++R F + NS+ LD FSG G+ LG+ +
Sbjct: 23 LRGRLLVTVGVLILVRLGIFLPVPGIDRPRFAEAISGSNSIFGLLDIFSGRGLSTLGVFA 82
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
LGI+PFINA I+ QLL P L++LQK EGEAGR+K+ Q TRY +V +AI+Q+ L
Sbjct: 83 LGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKISQITRYVTVCWAILQSTAFSAL 142
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+L+ + + +V + LT GS F + E I++ +GNG SLLIF +I++ LP +
Sbjct: 143 FLQQFALNPGPIFVAETAIALTAGSMFVMWASELITERGIGNGASLLIFVNIVASLPKAL 202
Query: 264 GRTVAEAFQDG--NYIG-LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
G T+ + Q G +G + +I+ F+ ++GIV VQE R+IPI A R R ++
Sbjct: 203 GDTI-DLVQVGGRETVGRVIVLILVFLATIVGIVVVQEGMRRIPIISARRQVGRRVLAEQ 261
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-VALNPGGS---FYLPTN 376
++LP ++N GVMPIIF+ + L+LP +A F A L L+P GS Y
Sbjct: 262 RSFLPLRLNQGGVMPIIFAAAILSLPLLIANFAKNAELANIINTYLSPSGSGSWVYALVY 321
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
++ I FF+Y+Y+ L L+P DV++ LK+ G+SIP +RPGK+T+ +++ V +R++ LG++FL
Sbjct: 322 MISIIFFSYFYSSLILNPVDVAQNLKKMGSSIPGIRPGKATSEYIERVSNRLTFLGAIFL 381
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A P +E + F+G TS+LILVG A DTAR++Q +ISQ+Y+ +
Sbjct: 382 GLVAIIPTGVESALGVPTFKGLGATSLLILVGVAIDTARQIQTYVISQRYEGM 434
>gi|425470380|ref|ZP_18849250.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9701]
gi|389884060|emb|CCI35631.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9701]
Length = 439
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 253/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + G++I+Q+IG L L V + L S
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFGWSIIQSIGITLGL--LVANGVVAGTLPS 156
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 216
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 217 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 276
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 277 PIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 336
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E
Sbjct: 337 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA 396
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 397 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|159028187|emb|CAO89794.1| secY [Microcystis aeruginosa PCC 7806]
Length = 439
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 254/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPS 156
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 216
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 217 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 276
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 277 PIIFASAVLVLPFQLVQALPTDNQVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 336
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P ++E
Sbjct: 337 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATIPTLVESA 396
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 397 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 436
>gi|425439158|ref|ZP_18819490.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9717]
gi|389714939|emb|CCI00548.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9717]
Length = 439
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 254/398 (63%), Gaps = 13/398 (3%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSV- 221
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S+
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPSIA 158
Query: 222 -TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--Y 276
T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAI 218
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 219 AQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVMPI 278
Query: 337 IFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP L + L + AL P Y+ LLI F+++Y L
Sbjct: 279 IFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYASLI 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D+S+ LK+ GASIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E T
Sbjct: 339 VNPKDMSQNLKKMGASIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESATG 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 399 VTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 436
>gi|318042546|ref|ZP_07974502.1| preprotein translocase subunit SecY [Synechococcus sp. CB0101]
Length = 438
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 250/395 (63%), Gaps = 10/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF + + L+ LD F+GGGI LG+ LGI+PFINA I+ QLL
Sbjct: 42 IYIPVPGIDRAAFQDFIARGGQLIGFLDIFTGGGISTLGVFGLGILPFINASIILQLLTS 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTS 220
P+L+DLQK EGEAGR+K+ QYTRY ++G+ I+Q++ L LRPY +++ +VL +
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQYTRYVALGWGILQSVVFALILRPYATAGTSELVFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI--- 277
L GS +I E I++ +G G SL+I+ +I++ LP + G T+ E Q G+
Sbjct: 162 AVALVTGSMVVMWISEVITERGIGQGASLVIYLNIVATLPRALGSTI-ELAQSGDRSTVG 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
G+ ++ F++ ++GIV V+E R+IPI A R + R +YLP K+N+ GVMPII
Sbjct: 221 GIVVLVAVFLITIVGIVCVEEGSRRIPIVSAKRQVGGATLSARQSYLPLKLNAGGVMPII 280
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPG-GSFYLPTNIL--LIAFFNYYYTFLQLDP 394
F+++ + LP T+A T L A AL+P G+ +L + LI F+++Y L ++P
Sbjct: 281 FASAVVFLPLTIANITKQPWLINIAAALSPNSGTPWLYALLFFGLIIGFSFFYATLTINP 340
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LKR G +IP VRPG +TA +L V +R+++LG++FL +A P+ +E T +
Sbjct: 341 VDVATNLKRSGVAIPGVRPGSATAGYLSGVQNRLTLLGALFLGAVAIIPSAVESATQVKT 400
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A TA+++Q +ISQ+Y+ +
Sbjct: 401 FQGLGATSLLILVGVAIQTAKQLQTAVISQRYEGM 435
>gi|157414144|ref|YP_001485010.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9215]
gi|254525969|ref|ZP_05138021.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
gi|157388719|gb|ABV51424.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9215]
gi|221537393|gb|EEE39846.1| preprotein translocase, SecY subunit [Prochlorococcus marinus str.
MIT 9202]
Length = 439
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/395 (44%), Positives = 253/395 (64%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-VNDFS-TDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L LR Y + S T +VL +
Sbjct: 102 SLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETTFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I+S LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMLVMWFSEIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+A ++ F+L ++GI++VQE R+IPI A R S L R +YLP K+N+ GVMPII
Sbjct: 222 IAVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGNSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+Y+Y L ++P
Sbjct: 282 FASALIFLPITIANVTGNPILIKLASSLNPGSSNPWPYALTFFSLILGFSYFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG +TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|443664018|ref|ZP_21133341.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
DIANCHI905]
gi|443331720|gb|ELS46365.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
DIANCHI905]
Length = 422
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 254/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 22 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 81
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S
Sbjct: 82 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPS 139
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 140 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 199
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 200 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 259
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 260 PIIFASAVLVLPFQLVQALPTDNQVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 319
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P ++E
Sbjct: 320 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATIPTLVESA 379
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 380 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 419
>gi|317968834|ref|ZP_07970224.1| preprotein translocase subunit SecY [Synechococcus sp. CB0205]
Length = 438
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 248/395 (62%), Gaps = 10/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R+AF Q SLL LD F+GGGI LG+ +LGI+PFINA I+ QLL
Sbjct: 42 IYIPVPGIDRQAFQAFAAQGGSLLGFLDIFTGGGISALGVFALGILPFINASIIIQLLTS 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL---T 219
P+L+DLQK EGEAGR+K+ QYTRY ++G+ + Q+I L LRPY + D V T
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQYTRYVALGWGLFQSIVFALILRPYALPGTPDLVFVVQT 161
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI-- 277
++ L+T GS ++ E I++ +G G SL+I+ +I++ LP + G T+ A G
Sbjct: 162 AIALVT-GSMVVMWLSEVITERGIGQGASLVIYLNIVATLPRALGSTIELAQTGGREAVG 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
G+ ++ F++ ++GIV V+E R+IPI A R +G R +YLP K+N+ GVMPII
Sbjct: 221 GIVVLVAVFLITIVGIVCVEEGSRRIPIVSAKRQVGGAGISARQSYLPLKLNAGGVMPII 280
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL---LIAFFNYYYTFLQLDP 394
F+++ + LP +A F+ L + A L+P S +L LI F+++Y L + P
Sbjct: 281 FASAVVFLPLQIANFSKNPTLIQVASFLSPNSSTPWVYALLFFGLIIGFSFFYATLTVRP 340
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LKR G +IP VRPG +T A+L + +R+++LG++FL +A P+ +E T +
Sbjct: 341 VDVASNLKRGGVAIPGVRPGSATTAYLTGIQNRLTLLGALFLGAVAIVPSAVESATRVQT 400
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A TA+++Q +ISQ+Y+ +
Sbjct: 401 FQGLGATSLLILVGVAIQTAKQLQTAVISQRYEGM 435
>gi|67923557|ref|ZP_00517030.1| SecY protein [Crocosphaera watsonii WH 8501]
gi|67854583|gb|EAM49869.1| SecY protein [Crocosphaera watsonii WH 8501]
Length = 439
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 252/404 (62%), Gaps = 21/404 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R GI+IP+ G++R F + NS+L LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 39 RFGIFIPIPGIDRTEFARAISDNSVLGFLDIFTGGGISTLGIFALGILPFINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ Q TRY + G++++Q+ + LRPY +V
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKISQITRYVAAGWSVIQSTAITIGLLRPYALGDPFWFVPE 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG- 278
+V LT GS F ++ E I++ +GNG SLLIF +I++ LP + G+T+ A G
Sbjct: 159 TVLALTAGSMFVMWVSELITERGIGNGASLLIFVNIVASLPRTLGQTIDYAQTGGRQAAA 218
Query: 279 -LATIIISFILLVLGI-VYVQEAERKIP------INYASRYTSRSGGLQRSAYLPFKVNS 330
+ +++ F+++++G+ V+VQE R++ + + +T + + L
Sbjct: 219 QVGILLLVFLVMIVGVLVFVQEGTRRMCLLSQPVVKWDGSFTEKEPAIYPKTLL------ 272
Query: 331 SGVMPIIFSTSSLALPGTLARF---TGIAA--LKKAAVALNPGGSFYLPTNILLIAFFNY 385
GVMPIIF+++ L LP +LA F G + L + A AL PG Y+ LLI FF+Y
Sbjct: 273 GGVMPIIFASAVLILPQSLAGFFRNDGAVSEVLVQVANALRPGTWVYVGVYSLLILFFSY 332
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+Y L ++P+DVS+ LK+ G+SIP +RPG+ T +L+ VL+R++ LG++FL+ +A P +
Sbjct: 333 FYASLIVNPEDVSKNLKKMGSSIPGLRPGEKTKQYLEGVLNRLTFLGAIFLSFVATVPTL 392
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+E T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 393 VEGATGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|425462438|ref|ZP_18841912.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9808]
gi|389824597|emb|CCI26445.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9808]
Length = 439
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 250/398 (62%), Gaps = 9/398 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + ++I+Q+IG L L + + +
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFAWSIIQSIGITLGLLVANGVVAGTLLSIA 158
Query: 221 VTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--Y 276
T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAI 218
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 219 AQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVMPI 278
Query: 337 IFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP L + L + AL P Y+ LLI F+++Y L
Sbjct: 279 IFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYASLI 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E T
Sbjct: 339 VNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESATG 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|422301329|ref|ZP_16388697.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9806]
gi|389792297|emb|CCI11968.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9806]
Length = 439
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 252/398 (63%), Gaps = 13/398 (3%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 41 GMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSV- 221
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S+
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPSIA 158
Query: 222 -TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--Y 276
T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAI 218
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 219 AQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVMPI 278
Query: 337 IFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP L + L + AL P Y+ LLI F+++Y L
Sbjct: 279 IFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYASLI 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E T
Sbjct: 339 VNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESATG 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|33862096|ref|NP_893657.1| preprotein translocase subunit SecY [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634314|emb|CAE19999.1| preprotein translocase SecY subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 439
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 252/395 (63%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND--FSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L LR Y + T +VL +
Sbjct: 102 SLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILRQYAIEGISETAFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I++ LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMIVMWFSEIITEKGIGQGASLVIFLNIVATLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+A ++ F+L ++GI++VQE R+IPI A R S L R +YLP K+N+ GVMPII
Sbjct: 222 IAVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGNSSLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+Y+Y L ++P
Sbjct: 282 FASALIFLPITVANVTGNPILIKIAGSLNPGSSNPWPYALTFFALILGFSYFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG +TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGSNTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|425436573|ref|ZP_18817008.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9432]
gi|425452029|ref|ZP_18831848.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
7941]
gi|389678654|emb|CCH92482.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9432]
gi|389766375|emb|CCI07997.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
7941]
Length = 439
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 252/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 39 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + ++I+Q+IG L L V + L S
Sbjct: 99 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFAWSIIQSIGITLGL--LVANGVVAGTLPS 156
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 157 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 216
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 217 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 276
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 277 PIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 336
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E
Sbjct: 337 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA 396
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 397 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|126697069|ref|YP_001091955.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9301]
gi|126544112|gb|ABO18354.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 439
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/395 (44%), Positives = 253/395 (64%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-VNDFS-TDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L L+ Y + S T +VL +
Sbjct: 102 SLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILKQYAIQGISETTFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I+S LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMLVMWFSEIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+A ++ F+L ++GI++VQE R+IPI A R S L R +YLP K+N+ GVMPII
Sbjct: 222 IAVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGTSTLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+Y+Y L ++P
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSSNPWPYALTFFSLILGFSYFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG +TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|440752074|ref|ZP_20931277.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
TAIHU98]
gi|440176567|gb|ELP55840.1| preprotein translocase, SecY subunit [Microcystis aeruginosa
TAIHU98]
Length = 424
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 252/400 (63%), Gaps = 13/400 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 24 RFGMFVPIPGLDRARLAEIIQSNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLL 83
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY + ++I+Q+IG L L V + L S
Sbjct: 84 TAALPSLEDLQKNEGEAGRRKIAQITRYIAFAWSIIQSIGITLGL--LVANGVVAGTLPS 141
Query: 221 V--TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
+ T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 142 IAATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQ 201
Query: 276 -YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVM
Sbjct: 202 AIAQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVM 261
Query: 335 PIIFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
PIIF+++ L LP L + L + AL P Y+ LLI F+++Y
Sbjct: 262 PIIFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYAS 321
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P V+E
Sbjct: 322 LIVNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTVVESA 381
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 382 TGVTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 421
>gi|78780017|ref|YP_398129.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9312]
gi|78713516|gb|ABB50693.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. MIT 9312]
Length = 439
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 253/395 (64%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-VNDFS-TDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L LR Y + S T +VL +
Sbjct: 102 SLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILRQYAIQGISETTFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I+S LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMLVMWFSEIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+A ++ F+L ++GI++VQE R+IPI A R + L R +YLP K+N+ GVMPII
Sbjct: 222 IAVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGNATLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+++Y L ++P
Sbjct: 282 FASALIFLPITIANVTGNPFLIKIASSLNPGSSNPWPYALTFFALILGFSFFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG +TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGSNTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|425455946|ref|ZP_18835657.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9807]
gi|389803096|emb|CCI17962.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9807]
Length = 439
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 253/398 (63%), Gaps = 13/398 (3%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSV- 221
P L+DLQK EGEAGR+K+ Q TRY + G+AI+Q+IG L L V + L S+
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWAIIQSIGITLGL--LVANGVVAGTLPSIA 158
Query: 222 -TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--Y 276
T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAI 218
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 219 AQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVMPI 278
Query: 337 IFSTSSLALPGTLARFTGI-----AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP L + L + AL P Y+ LLI F+++Y L
Sbjct: 279 IFASAVLVLPFQLVQALPTDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYASLI 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P ++E T
Sbjct: 339 VNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATIPTLVESATG 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q ++SQ+Y+++
Sbjct: 399 VTTFRGLGATSLLILVGVAIDTAKQIQTYVMSQRYEDM 436
>gi|123969279|ref|YP_001010137.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
AS9601]
gi|123199389|gb|ABM71030.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
AS9601]
Length = 439
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 251/395 (63%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ ++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPSIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND--FSTDWVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L LR Y + T +VL +
Sbjct: 102 SLPFLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILRQYAIEGISETTFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I+S LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMLVMWFSEIITEKGIGQGASLVIFLNIVSTLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+A ++ F+L ++GI++VQE R+IPI A R + L R +YLP K+N+ GVMPII
Sbjct: 222 IAVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGNTTLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+Y+Y L ++P
Sbjct: 282 FASALIFLPITIANVTGNPVLIKLASSLNPGSSNPWPYALTFFSLILGFSYFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG +TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGTNTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|425447769|ref|ZP_18827751.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9443]
gi|389731598|emb|CCI04363.1| Preprotein translocase secY subunit [Microcystis aeruginosa PCC
9443]
Length = 439
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 254/398 (63%), Gaps = 13/398 (3%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
G+++P+ G++R + N+ L LD F+GGG+ LGI +LGI+P+INA I+ QLL
Sbjct: 41 GMFVPIPGLDRARLAEIIQGNAALGILDLFTGGGLSTLGIFALGILPYINASIIVQLLTA 100
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSV- 221
P L+DLQK EGEAGR+K+ Q TRY + G++I+Q+IG L L V + L S+
Sbjct: 101 ALPSLEDLQKNEGEAGRRKIAQITRYIAFGWSIIQSIGITLGL--LVANGVVAGTLPSIA 158
Query: 222 -TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--Y 276
T+L L GS F +I E I++ LGNG SLLIF +I++ LP + G T+ A Q G
Sbjct: 159 ATVLALVAGSMFVMWISELITERGLGNGASLLIFVNIVAVLPKTLGDTITFAQQGGRQAI 218
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +++ F+++++GIV+VQE R+IPI A R R +R++YLP ++N GVMPI
Sbjct: 219 AQVVILLLVFLVMIIGIVFVQEGTRRIPIVSARRQVGRRLYRERTSYLPLRLNQGGVMPI 278
Query: 337 IFSTSSLALP----GTLARFTGIA-ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF+++ L LP L R + L + AL P Y+ LLI F+++Y+ L
Sbjct: 279 IFASAVLVLPFQLVQALPRDNPVGQVLVQLVNALRPDSWGYVAFYSLLILGFSFFYSSLI 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D+S+ LK+ G SIP +RPG +T +L+ VL+R+++LG++FL+++A P ++E T
Sbjct: 339 VNPKDMSQNLKKMGTSIPGIRPGTATTNYLEGVLNRLTLLGALFLSLVATVPTLVESATG 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T FRG TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 VTTFRGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 436
>gi|585988|sp|P38397.1|SECY_PYRSA RecName: Full=Protein translocase subunit SecY
gi|495265|emb|CAA52783.1| SecY [Pyrenomonas salina]
Length = 412
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 246/401 (61%), Gaps = 16/401 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
+G L LSRLG +IP+ GV+ +AF ++ N +++ L+ FSGGG +GI +LGIVP+INA
Sbjct: 21 IGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSGGGFASIGIFALGIVPYINA 80
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFS 213
IV QL P L+ LQK EGEAGR+K+ Q TRY ++G+A +Q++G ++RPYV ++
Sbjct: 81 SIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWAAIQSLGVSFWVRPYVFNWD 140
Query: 214 TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD 273
+ +V+ LT GS + E+I++ +GNG SLLIF +II+ LP Q
Sbjct: 141 SQFVVQMTLALTTGSMLIMWFSEQITEKGIGNGPSLLIFINIIAGLPKLIQ-------QK 193
Query: 274 GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG--LQRSAYLPFKVNSS 331
N I ++L VY + +I I Y ++ G ++++YLP ++N
Sbjct: 194 SNAISSTNQTTELVVLASISVY----DSRIFIRDRRYYILQTVGRHCKQTSYLPLRLNQG 249
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYT 388
GVMPIIF+++ L LP L + + K L+P S YL LI FF+Y+Y
Sbjct: 250 GVMPIIFASAILVLPAYLGQVIQNQFVLKLVTLLSPNSSDKNLYLIFYFSLILFFSYFYA 309
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L ++P+DVS+ LK+ +SIP VRPGK+T +L+ L+R++ LG++FLA +A P++IE
Sbjct: 310 SLIINPNDVSQNLKKMESSIPGVRPGKATTDYLQKTLNRLTFLGALFLAFIAVVPSIIEN 369
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T ++ F+G TS+LILVG A DT+R++Q +IS+ Y+NI
Sbjct: 370 ITSISTFKGLGATSLLILVGVAIDTSRQIQTYLISRNYENI 410
>gi|87124981|ref|ZP_01080828.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
gi|86167301|gb|EAQ68561.1| preprotein translocase SecY subunit [Synechococcus sp. RS9917]
Length = 439
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/414 (42%), Positives = 264/414 (63%), Gaps = 11/414 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL-LSTLDSFSGGGIGRLGICS 144
L + L LG L L RLGIYIP+ G++R AF L Q + LD F+GGGI LG+ +
Sbjct: 24 LRSRVLTTLGLLMLVRLGIYIPMPGIDRVAFQQFLQQGGQLIGFLDIFTGGGISTLGVFA 83
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q+I +
Sbjct: 84 LGILPFINASIILQLLTAALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSIVFAMI 143
Query: 205 LRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
LR Y + +D V T L L GS ++ E I++ +G G SL+IF +I++ LP +
Sbjct: 144 LRQYAVEGLSDTVFVVQTALALVTGSMVVMWLSEVITERGIGQGASLVIFLNIVATLPQA 203
Query: 263 FGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL- 318
G T+ +A Q G+ +G+ +++ F++ ++GI++VQE R++PI A R + L
Sbjct: 204 LGATIEKA-QTGDRNDVVGIIVLVLVFLVTIVGIIFVQEGARRLPIVSAKRQVGGTALLP 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
R +YLP K+N+ GVMPIIF+++ + LP T+A T L +AA ALNP + P +L
Sbjct: 263 SRQSYLPLKLNAGGVMPIIFASALIFLPLTIANVTKNPLLIRAASALNPSAANPWPYALL 322
Query: 379 LIAF---FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
A F Y+Y L ++P D++ LK+ G +IP VRPG +TAA+L V +R+++LG +F
Sbjct: 323 FFALILGFAYFYASLTVNPTDIASNLKKGGVAIPGVRPGSATAAYLSGVQNRLTLLGGLF 382
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L +A P+ +E+ T +T F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 383 LGAVAIIPSAVERATGVTTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|123966955|ref|YP_001012036.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
MIT 9515]
gi|123201321|gb|ABM72929.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 439
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 251/395 (63%), Gaps = 9/395 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDRVAFKSFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIIIQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTS 220
P L+DLQK EGEAGR+K+ Q TRY S+G+ +Q+I L LR Y + ++ +VL +
Sbjct: 102 SLPVLEDLQKNEGEAGRRKIAQITRYVSLGWGFLQSIIFSLILRQYAVEGISESAFVLQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L GS + E I++ +G G SL+IF +I++ LP + T+ A+ G+ +G
Sbjct: 162 SIALVTGSMIVMWFSEIITEKGIGQGASLVIFLNIVATLPKALSSTIEKAQTGDRGDVLG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPII 337
+ ++ F+L ++GI++VQE R+IPI A R S L R +YLP K+N+ GVMPII
Sbjct: 222 IVVLLGVFLLTIVGIIFVQEGARRIPIVSAKRQIGSSSLLPTRQSYLPLKLNAGGVMPII 281
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP---TNILLIAFFNYYYTFLQLDP 394
F+++ + LP T+A TG L K A +LNPG S P T LI F+Y+Y L ++P
Sbjct: 282 FASALIFLPITVANVTGNPVLIKLAGSLNPGSSNPWPYALTFFALILGFSYFYASLTINP 341
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
DV+ LK+ G +IP VRPG TA +L + +R+++LG +FL +A PA +E+ T++
Sbjct: 342 VDVASNLKKGGVAIPGVRPGSKTANYLSGIQNRLTLLGGLFLGSVAIIPAAVERATNVQT 401
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 402 FQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGL 436
>gi|72382949|ref|YP_292304.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL2A]
gi|72002799|gb|AAZ58601.1| protein translocase subunit secY/sec61 alpha [Prochlorococcus
marinus str. NATL2A]
Length = 439
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 264/421 (62%), Gaps = 15/421 (3%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGR 139
F L G+ LG L + RLGIYIP+ G++REAF +DQ L+ LD F+GGGI
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDREAFKTFIDQGGQLIGFLDIFTGGGIST 78
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
LG+ +LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ+
Sbjct: 79 LGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQST 138
Query: 200 GQVLYLRPYVND--FSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L LR Y + T++V+ + L GS ++ E I++ +G G SL+IF +I++
Sbjct: 139 VFALILRQYAVEGISETEFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIFLNIVA 198
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASRYTSR 314
LP + T+ +A Q G+ + III I+ + +GI++VQE R+IPI S +
Sbjct: 199 TLPKALSSTIEKA-QTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPI--VSAKSQM 255
Query: 315 SGGL---QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
GG R +YLP K+N+ GVMPIIF+++ + LP T+A FT L KAA +LNPG S
Sbjct: 256 GGGALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSLNPGSSN 315
Query: 372 YLPTNILLIAF---FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
P I A F Y+Y L ++P D++ LK+ G +IP VRPG +T+ +L V +R+
Sbjct: 316 PWPYAITFFALILGFAYFYASLTINPLDIASNLKKGGVAIPGVRPGGATSNYLSGVQNRL 375
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++LG +FL +A PA +E+ T++ F+G TS+LILVG A DT++++Q +ISQ+Y+
Sbjct: 376 TLLGGLFLGSVAIVPAAVERATNVQTFQGLGATSLLILVGVAIDTSKQIQTYVISQRYEG 435
Query: 489 I 489
+
Sbjct: 436 L 436
>gi|289523349|ref|ZP_06440203.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503041|gb|EFD24205.1| preprotein translocase, SecY subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 430
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 261/419 (62%), Gaps = 17/419 (4%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
D F+ P L + L +LG L + RLG +IP GV+ +A +Q +LS D F+GG +
Sbjct: 7 DMFRLPDLKSRILFVLGVLLVFRLGAHIPTPGVDAKAMASLFEQGGVLSLFDLFAGGALR 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
R I +LG+ P+INA IV QLLA + P ++ +QK EGE GR+K++QYTR +++ FA +QA
Sbjct: 67 RFSIFALGVTPYINASIVMQLLAVVVPAIEKMQK-EGEEGRRKIVQYTRVSTILFAGIQA 125
Query: 199 IGQVLYLRP----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+G VL+LR YV S ++ ++ L GS ++GE ISD +GNG SLLIF
Sbjct: 126 VGMVLWLRSMDIIYVGGIS---IVVAIVTLIAGSIAVMWMGEMISDHGIGNGISLLIFAG 182
Query: 255 IISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRY- 311
I++ +P + RT + G N++ L I I+++ G + +QE +R++P+ YA R
Sbjct: 183 IVARIPEAIMRTFT-LLRTGEMNFLTLIIAIAIMIVVIAGCILLQEGQRRLPVQYAKRVV 241
Query: 312 -TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS 370
T GG +S ++P +VNS+GV+PIIF++S L P T+ARF + A +P
Sbjct: 242 GTRVYGG--QSTFIPLRVNSAGVIPIIFASSVLLFPTTVARFFSAGFAQTIAGIFSPSSP 299
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ +LLI FF Y+YT + +P DV+ LK+ G IP +RPG+ TA +++ VLSR+++
Sbjct: 300 IYMILYVLLIIFFTYFYTAVVFNPVDVANNLKKYGGFIPGIRPGRPTADYIERVLSRVTL 359
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+VFLA +A P+++ Q +T F F GT+VLI+VG A +T ++++A+++ + Y+ I
Sbjct: 360 GGAVFLAGIALLPSLLTQMLGITTFY-FGGTAVLIVVGVALETVQQIEAQLLMRHYEGI 417
>gi|124026690|ref|YP_001015805.1| preprotein translocase subunit SecY [Prochlorococcus marinus str.
NATL1A]
gi|123961758|gb|ABM76541.1| preprotein translocase SecY subunit [Prochlorococcus marinus str.
NATL1A]
Length = 439
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 264/421 (62%), Gaps = 15/421 (3%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGR 139
F L G+ LG L + RLGIYIP+ G++REAF +DQ L+ LD F+GGGI
Sbjct: 19 FSNEELRGRVFTTLGLLLIVRLGIYIPMPGIDREAFKNFIDQGGQLIGFLDIFTGGGIST 78
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
LG+ +LGI+PFINA I+ QLL P+L+DLQK EGEAGR+K+ Q TRY ++G+ +VQ+
Sbjct: 79 LGVFALGILPFINASIIIQLLTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLVQST 138
Query: 200 GQVLYLRPYVND--FSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L LR Y + +++V+ + L GS ++ E I++ +G G SL+IF +I++
Sbjct: 139 VFALILRQYAIEGISESEFVIQTSLALVTGSMIVMWLSEIITEKGIGQGASLVIFLNIVA 198
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASRYTSR 314
LP + T+ +A Q G+ + III I+ + +GI++VQE R+IPI S +
Sbjct: 199 TLPKALSSTIEKA-QTGDRADVLGIIILLIVFLITIVGIIFVQEGARRIPI--VSAKSQM 255
Query: 315 SGGL---QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
GG R +YLP K+N+ GVMPIIF+++ + LP T+A FT L KAA +LNPG S
Sbjct: 256 GGGALLPSRQSYLPLKLNAGGVMPIIFASALIFLPITIANFTQNPLLIKAASSLNPGSSN 315
Query: 372 YLPTNILLIAF---FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
P I A F Y+Y L ++P D++ LK+ G +IP VRPG +T+ +L V +R+
Sbjct: 316 PWPYAITFFALILGFAYFYASLTINPLDIASNLKKGGVAIPGVRPGGATSNYLSGVQNRL 375
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++LG +FL +A PA +E+ T++ F+G TS+LILVG A DT++++Q +ISQ+Y+
Sbjct: 376 TLLGGLFLGSVAIVPAAVERATNVQTFQGLGATSLLILVGVAIDTSKQIQTYVISQRYEG 435
Query: 489 I 489
+
Sbjct: 436 L 436
>gi|392406865|ref|YP_006443473.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
gi|390620001|gb|AFM21148.1| protein translocase subunit secY/sec61 alpha [Anaerobaculum mobile
DSM 13181]
Length = 430
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 260/419 (62%), Gaps = 17/419 (4%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
D F+ P L + L +LG L + RLG +IP GV+ +A +Q +L+ D F+GG +
Sbjct: 7 DVFRLPDLKSRILFVLGILLVFRLGAHIPTPGVDAKAMASLFEQGGVLNLFDLFAGGALR 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
R I +LG+ P+INA IV QLLA + P ++ +QK EGE GR+K++QYTR +++ F+ +QA
Sbjct: 67 RFSIFALGVTPYINASIVMQLLAVVIPAVEKMQK-EGEEGRRKIVQYTRISTILFSAIQA 125
Query: 199 IGQVLYLRP----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+G VL+LR YV S V ++ L GS ++GE ISD +GNG SLLIF
Sbjct: 126 VGMVLWLRSMNVIYVGGIS---VFVAIVTLVAGSIAVMWLGEMISDHGIGNGISLLIFAG 182
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIIS--FILLVLGIVYVQEAERKIPINYASRY- 311
I++ +P S RT + + G + ++ ++++ G + +QE +R++P+ YA R
Sbjct: 183 IVARIPESITRTF-KLLRTGELNLITLLLALIIMVIVIAGCILLQEGQRRLPVQYAKRVV 241
Query: 312 -TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS 370
T GG ++ ++P +VNS+GV+PIIF++S L P T+ARF + + L+P
Sbjct: 242 GTKVYGG--QTTFIPLRVNSAGVIPIIFASSVLLFPSTIARFFSGGFAQAISKLLSPSSP 299
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ +LLI FF Y+YT + +P DV+ LK+ G IP +RPG+ TA +++ VLSR+++
Sbjct: 300 LYMVLYVLLIIFFTYFYTAVVFNPADVANNLKKYGGFIPGIRPGRPTADYIEKVLSRVTL 359
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+VFLA +A P+++ Q +T F F GT+VLI+VG A +T ++++A+++ + Y+ +
Sbjct: 360 GGAVFLAAIAILPSLLTQMLGITTFY-FGGTAVLIVVGVALETVQQIEAQLLMRHYEGL 417
>gi|116072182|ref|ZP_01469450.1| preprotein translocase SecY [Synechococcus sp. BL107]
gi|116065805|gb|EAU71563.1| preprotein translocase SecY [Synechococcus sp. BL107]
Length = 439
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 255/396 (64%), Gaps = 11/396 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++REAF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ + LR Y + ++ V T
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVVFVVQT 161
Query: 223 LLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YI 277
L L GS +I E I++ +G G SL+IF +I++ LP + G T+ EA Q G+ +
Sbjct: 162 ALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATI-EAAQTGDRDTVL 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPI 336
G+ +++ F+ ++GI++VQE R+IPI A R +G L R +YLP K+N+ GVMPI
Sbjct: 221 GIVVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGAGALPTRQSYLPLKLNAGGVMPI 280
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI---LLIAFFNYYYTFLQLD 393
IF+++ + LP T+A T L +AA LNP S P + LI F+Y+Y L ++
Sbjct: 281 IFASALIFLPVTVANLTKSEWLIRAASMLNPSASNPWPYALAFFTLILGFSYFYASLTVN 340
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P D++ LKR G +IP VRPG +T +L V +R+++LG +FL +A PA +E+ T++
Sbjct: 341 PADIATNLKRGGVAIPGVRPGSATTNYLSGVQNRLTLLGGLFLGSVAIIPAAVERATNVQ 400
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 401 TFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|78185540|ref|YP_377974.1| preprotein translocase subunit SecY [Synechococcus sp. CC9902]
gi|78169834|gb|ABB26931.1| protein translocase subunit secY/sec61 alpha [Synechococcus sp.
CC9902]
Length = 439
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 255/396 (64%), Gaps = 11/396 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++REAF +DQ L+ LD F+GGGI LGI +LGI+PFINA I+ QLL
Sbjct: 42 IYIPMPGIDREAFKQFIDQGGQLIGFLDIFTGGGISTLGIFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ + LR Y + ++ V T
Sbjct: 102 SLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYAVEGLSEVVFVVQT 161
Query: 223 LLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YI 277
L L GS +I E I++ +G G SL+IF +I++ LP + G T+ EA Q G+ +
Sbjct: 162 ALALVTGSMVVMWIAEVITERGIGQGASLVIFLNIVATLPRTLGATI-EAAQTGDRDTVL 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPI 336
G+ +++ F+ ++GI++VQE R+IPI A R +G L R +YLP K+N+ GVMPI
Sbjct: 221 GIVVLVLVFLATIVGIIFVQEGARRIPIVSAKRQVGGAGALPTRQSYLPLKLNAGGVMPI 280
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI---LLIAFFNYYYTFLQLD 393
IF+++ + LP T+A T L +AA LNP S P + LI F+Y+Y L ++
Sbjct: 281 IFASALIFLPVTVANLTKSEWLIRAASMLNPSASNPWPYALAFFTLILGFSYFYASLTVN 340
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P D++ LKR G +IP VRPG +T +L V +R+++LG +FL +A PA +E+ T++
Sbjct: 341 PADIATNLKRGGVAIPGVRPGSATTNYLSGVQNRLTLLGGLFLGSVAIIPAAVERATNVQ 400
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 401 TFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|116075749|ref|ZP_01473008.1| preprotein translocase SecY [Synechococcus sp. RS9916]
gi|116067064|gb|EAU72819.1| preprotein translocase SecY [Synechococcus sp. RS9916]
Length = 435
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 254/395 (64%), Gaps = 7/395 (1%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
R+GIYIP+ G++R F L +L+ LD F+GGG+ LG+ +LGI+PFINA I+ QL
Sbjct: 39 RIGIYIPMPGIDRVRFQEFLQGGGNLIGFLDIFTGGGVSSLGVFALGILPFINASIIMQL 98
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLT 219
L P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ L L+ Y + ++ V
Sbjct: 99 LTASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFALILKQYATEGLSEVVFV 158
Query: 220 SVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN-- 275
T L L G+ +I E I++ +G G SL+IF +I++ LP++ G +++A G
Sbjct: 159 IQTALALVTGAMVVMWISEVITERGIGQGASLVIFLNIVATLPSTLGNAISQAQLGGRQA 218
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVM 334
IGLAT+ + F+ ++GIV+VQEA R++PI A R +G L R +YLP K+N+ GVM
Sbjct: 219 VIGLATLTLVFLATIVGIVFVQEASRRLPIVSAKRQIGGTGTLPSRQSYLPMKLNAGGVM 278
Query: 335 PIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDP 394
PIIF+++ L LP TLA+ T L +A A+ PG + Y LI F+Y+Y L L+P
Sbjct: 279 PIIFASAMLFLPATLAQVTKQEWLAQAVGAIQPGKTAYYVLYFALILGFSYFYASLTLNP 338
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA 454
D++ LKR G +IP VRPG +TA ++ V +R+++LG +FL + P+++E ++ +
Sbjct: 339 TDIASNLKRGGVAIPGVRPGTATANYISGVQARLTLLGGLFLGAVVIIPSLLENSSGIV- 397
Query: 455 FRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G TS+LILVG A +TA++V+ ++SQ+Y+ +
Sbjct: 398 LGGLGSTSLLILVGVAIETAKQVKTYVVSQRYEGM 432
>gi|33866617|ref|NP_898176.1| preprotein translocase subunit SecY [Synechococcus sp. WH 8102]
gi|33633395|emb|CAE08600.1| preprotein translocase SecY subunit [Synechococcus sp. WH 8102]
Length = 441
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 258/399 (64%), Gaps = 13/399 (3%)
Query: 103 GIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLA 161
GIYIP+ G++REAF ++Q SLL LD F+GGGI LG+ +LGI+PFINA I+ QLL
Sbjct: 41 GIYIPIPGIDREAFASFIEQGGSLLGFLDIFTGGGISTLGVFALGILPFINASIILQLLT 100
Query: 162 QINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSV 221
P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q++ + LR Y + ++ V
Sbjct: 101 ASLPQLEDLQKNEGEAGRRKIAQITRYVALGWGLIQSVVFAMILRQYALEGISEVVFVVQ 160
Query: 222 TLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---Y 276
T L L GS ++ E I++ +G G SL+IF +I+ LP + G T+ EA Q G+
Sbjct: 161 TALCLVTGSMVVMWLSEVITERGIGQGASLVIFLNIVGTLPRTLGATI-EAAQTGDRNTV 219
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG-GL--QRSAYLPFKVNSSGV 333
+G+ +++ F++ ++GI++VQE R+IPI A R +G G+ R +YLP K+N+ GV
Sbjct: 220 LGIVVLVLVFLVTIVGIIFVQEGARRIPIVSAKRQVGGAGVGVLPTRQSYLPLKLNAGGV 279
Query: 334 MPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF---FNYYYTFL 390
MPIIF+++ + LP T+A FT L + A LNPG + P + A F Y+Y L
Sbjct: 280 MPIIFASAVIFLPVTIANFTNNEWLIRGASLLNPGAANPWPYALAFFALILGFAYFYASL 339
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
++P D++ LK+ G +IP VRPG +TA +L V +R+++LG +FL +A PA +E+ T
Sbjct: 340 TVNPTDIASNLKKGGVAIPGVRPGSATATYLSGVQNRLTLLGGLFLGSVAIIPAAVERAT 399
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 400 NVQTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 438
>gi|319789258|ref|YP_004150891.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
gi|317113760|gb|ADU96250.1| preprotein translocase, SecY subunit [Thermovibrio ammonificans
HB-1]
Length = 444
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 245/410 (59%), Gaps = 13/410 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+FL L LA+ RLG +IP+ G+N EA V Q ++ +D FSGG + +L I +LG
Sbjct: 19 RFLFTLALLAVFRLGAHIPVPGINVEALVDFFQRAQGTVFGMMDIFSGGALRKLTIFALG 78
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I++ I+ QLL P ++ L K EGE GR+K+ QYTRY +V A +QA+G + L
Sbjct: 79 VMPYISSSIIMQLLTVAIPSIEKLAKEEGEYGRRKINQYTRYGAVLLAFIQALGIAIGLE 138
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + ++ +VT LT GS F ++GE+I++ +GNG SLLIF I++
Sbjct: 139 SMTSPTGVPIVPNPGFTFLFVTVTTLTAGSTFLMWLGEKITEKGIGNGMSLLIFAGIVAS 198
Query: 259 LPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
+P++ R + D + L T++ +L++ IVY+QEAER++P+ YA R R
Sbjct: 199 IPSAVIRVLTMVKSGDMSLFKLLTVVAIIVLMIAAIVYIQEAERRVPLQYARRTVGRQAV 258
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
+ ++YLP K+N +GV+PIIF+ S L P T+ RF + AL PG + YL
Sbjct: 259 GRYTSYLPIKLNPAGVIPIIFAASILMFPATVVRFIHNPIAQSIYEALQPGTTLYLVVYG 318
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
LI FF Y+YT + +P++++E L + G IP VR G TA +L ++SR++ G+VFL
Sbjct: 319 ALIFFFTYFYTAIVFNPEEIAENLNKAGGFIPGVRAGTDTAKYLDRIVSRLTFAGAVFLT 378
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++A P +I Q +L + F GT++LI+VG A DT ++++A + Y+
Sbjct: 379 LVALIPMIIVQKMNLPFY--FGGTAILIVVGVALDTLKRMEAFALMLSYE 426
>gi|332295371|ref|YP_004437294.1| preprotein translocase subunit SecY [Thermodesulfobium narugense
DSM 14796]
gi|332178474|gb|AEE14163.1| preprotein translocase, SecY subunit [Thermodesulfobium narugense
DSM 14796]
Length = 424
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 260/428 (60%), Gaps = 15/428 (3%)
Query: 71 MEDS---SIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLS 127
M DS +++FGD L K + + + L R G +IP+ GVN E ++Q +L
Sbjct: 1 MIDSLMGAMNFGD-----LRNKVIFTILMIVLFRFGTHIPVPGVNHEMISRIIEQTGILG 55
Query: 128 TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTR 187
LD F+GG + + I ++GI P+INA I+ QLL I P++Q +QK E E+GRK + QYTR
Sbjct: 56 FLDLFAGGALAKFSIFAMGITPYINASIIIQLLTPIVPRMQAMQK-ESESGRKALAQYTR 114
Query: 188 YASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
Y +V A +Q + L + F+ ++T+V +LT GS F ++GE I++ +GNG
Sbjct: 115 YLTVVLAALQGVAMSFVLSSAIPVFTFFNIVTTVIVLTAGSVFLMWMGELITEKGIGNGA 174
Query: 248 SLLIFTSIISYLPASFGRTVAE-AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
SLLIF IIS LP FG+T + D N + + + F L ++ IV++Q AERKIPI+
Sbjct: 175 SLLIFIGIISRLPMYFGQTFSLLMIGDINILQVIALFAIFCLAIVAIVWIQLAERKIPIH 234
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT-GIAALKKAAVAL 365
YA + R +++YLP ++N++GV+PIIF+ S L LP T+ F G+ +++ A+ L
Sbjct: 235 YAKKVVGRKVYGGQTSYLPLRLNTAGVLPIIFAVSILMLPNTIFGFLRGVPSVQNLAIYL 294
Query: 366 N----PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ P Y LI FF ++YT + +P +++ LK+ G IP +RPGK T+ +
Sbjct: 295 SALFSPESVLYNIIEFFLIIFFAFFYTAIIYNPVELASNLKKYGGFIPGIRPGKPTSEYF 354
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VL+RI+ LG +FL +A PA+ E T +T FRG T++LI+VG A DT R++QA++
Sbjct: 355 DRVLTRITTLGGLFLGFIALIPALSELLTKVTTFRGLGATALLIVVGVALDTIRQIQAQL 414
Query: 482 ISQKYKNI 489
++++Y+++
Sbjct: 415 MAKQYEHL 422
>gi|254430806|ref|ZP_05044509.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
gi|197625259|gb|EDY37818.1| preprotein translocase, SecY subunit [Cyanobium sp. PCC 7001]
Length = 439
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 251/398 (63%), Gaps = 17/398 (4%)
Query: 105 YIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQI 163
YIP+ G++R AF L + L+ LD F+GGG+ LG+ +LGI+PFINA I+ QLL
Sbjct: 43 YIPVPGIDRVAFQDFLSRGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLLTAA 102
Query: 164 NPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTSV 221
P+L+DLQK EGEAGR+K+ Q TRY ++G+ I+Q+ L LR Y + ++ +VL +
Sbjct: 103 LPQLEDLQKNEGEAGRRKIAQITRYVALGWGILQSTVFALILRQYATEGLSEPVFVLQTA 162
Query: 222 TLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN---YIG 278
L GS +I E I++ +G G SL+IF +I++ LP + G T+ E Q G+ G
Sbjct: 163 LALVTGSMIVMWISEVITERGIGQGASLVIFVNIVATLPRALGSTI-ELAQSGDRSTVGG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ----RSAYLPFKVNSSGVM 334
+ +++ F+L ++GI++VQE R+IPI A R + GG+ R +YLP K+N+ GVM
Sbjct: 222 IVVLVLVFLLTIVGIIFVQEGNRRIPIVSAKR---QVGGVNLLAARQSYLPLKLNAGGVM 278
Query: 335 PIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQ 391
PIIF+++ + LP T+A T L + A LNP S Y LI F+++Y L
Sbjct: 279 PIIFASAVVFLPLTIANLTRSPWLIQVAGYLNPNSSTPWLYALVFFGLIVGFSFFYASLT 338
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
++P D++ LKR G ++P VRPG +TAA+L V +R+++LG++FL +A P+ +E T
Sbjct: 339 VNPVDIATNLKRGGVAVPGVRPGSATAAYLGGVQNRLTLLGALFLGAVAIIPSAVEGATQ 398
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 399 VRTFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>gi|427703087|ref|YP_007046309.1| preprotein translocase subunit SecY [Cyanobium gracile PCC 6307]
gi|427346255|gb|AFY28968.1| preprotein translocase, SecY subunit [Cyanobium gracile PCC 6307]
Length = 439
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 247/396 (62%), Gaps = 11/396 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF + Q L+ LD F+GGG+ LG+ +LGI+PFINA I+ QL+
Sbjct: 42 IYIPVPGIDRVAFQDFIRQGGQLIGFLDIFTGGGLSTLGVFALGILPFINASIIIQLMTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW---VLT 219
P+L++LQK EGEAGR+K+ Q TRY ++G+ I+Q+I L LR Y +W V T
Sbjct: 102 ALPQLEELQKNEGEAGRRKLAQITRYVALGWGILQSIVFALILRQYALPGLPEWLFVVQT 161
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYI 277
S+ L+T GS +I E I++ +G G SL+IF +I++ LP + G T+ A++
Sbjct: 162 SLALVT-GSMVVMWISEVITERGIGQGASLVIFINIVATLPKALGSTIQLAQSGDRATVG 220
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL-QRSAYLPFKVNSSGVMPI 336
G+ +++ F++ ++ I+++QE R+IPI A R + L R +YLP K+N+ GVMPI
Sbjct: 221 GIVVLVLVFLVTIVSIIFLQEGSRRIPIVSAKRQVGGASTLASRQSYLPLKLNAGGVMPI 280
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLD 393
IF+++ + LP T+A T L + A LNP S Y LI F ++Y L ++
Sbjct: 281 IFASAVVFLPLTIANLTKSPWLIRVAGYLNPTSSTPWLYALVYFALICGFAFFYASLTVN 340
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P D++ LKR G +IP VRPG +TA +L V +R+++LG VFL +A P+ +E T +
Sbjct: 341 PVDIATNLKRSGVAIPGVRPGSATADYLSGVSNRLTLLGGVFLGAIAIIPSAVEGATQVR 400
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
F+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 401 TFQGLGATSLLILVGVAIDTAKQVQTYVISQRYEGL 436
>gi|288818036|ref|YP_003432383.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|384128800|ref|YP_005511413.1| preprotein translocase subunit SecY [Hydrogenobacter thermophilus
TK-6]
gi|288787435|dbj|BAI69182.1| preprotein translocase SecY subunit [Hydrogenobacter thermophilus
TK-6]
gi|308751637|gb|ADO45120.1| preprotein translocase, SecY subunit [Hydrogenobacter thermophilus
TK-6]
Length = 432
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 245/410 (59%), Gaps = 15/410 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+FL L A+ RLG +IPL G++ A Q ++ D FSGG +GR+ + +LG
Sbjct: 17 RFLYTLLMFAIYRLGSHIPLPGIDTTALEDFFKSFQGTIFYLYDIFSGGNLGRMTLFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A I+ QLL P+LQ L K EG+ GR K+ QYTRY +V A VQ++G L+L+
Sbjct: 77 VMPYISASIMMQLLTVAVPELQRLAKEEGDYGRYKINQYTRYLTVFVAFVQSLGVSLWLQ 136
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V D + LT+V L + F ++G+RI++ +GNG SLLIF I++
Sbjct: 137 NQVSPRGFPIVPDSGIVFTLTTVIALVSSTMFLVWVGDRITEKGIGNGMSLLIFAGIVAN 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATI--IISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
P + R V E ++G+ A + II I +++GIV++QEAER+IP+ Y R R
Sbjct: 197 FPNASIR-VLEMLKNGDLSPFAFVGAIIFVIAVIVGIVFMQEAERRIPVQYPRRQIGRQE 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
S YLP K+N +GV+PIIF+ S L +P T+ F + A NP FY
Sbjct: 256 VAGGSTYLPIKINPAGVIPIIFAQSLLIIPSTVIGFINHPIARLLHDAFNPTTLFYNFLY 315
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLI FF Y+YT + ++P DV++ LK+ GA +P VRPG+ T L+T+++R++ +GS+FL
Sbjct: 316 VLLIVFFTYFYTAVLINPVDVADNLKKGGAFVPGVRPGQDTQKLLETIVNRLAFIGSIFL 375
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+++A P I + + F GT+ LI+VG A DT K++A++I +KY
Sbjct: 376 SVVAIIPIFISLWLKVPFY--FGGTTALIVVGVALDTLNKLEAQMIQKKY 423
>gi|357419506|ref|YP_004932498.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
gi|355396972|gb|AER66401.1| protein translocase subunit secY/sec61 alpha [Thermovirga lienii
DSM 17291]
Length = 431
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 250/415 (60%), Gaps = 9/415 (2%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
D F+ P L + L L L + RLG +IP G++ EA + S L+ LD F+GG +
Sbjct: 7 DAFRLPDLKRRILFTLAVLFIYRLGAHIPTPGIDTEAMARLFGEGSALNFLDLFAGGALR 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
R I +LG+ P+INA IV QLL I P L+ LQK EGE GRKK++QYTR +V FA VQA
Sbjct: 67 RFSIFALGVAPYINASIVMQLLVVIFPALEKLQK-EGEQGRKKIVQYTRLGTVFFAAVQA 125
Query: 199 IGQVLYLRPYVNDFS---TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+G +LR + FS D ++ +T+ T GS ++GE +SD +GNG SLLIF I
Sbjct: 126 LGMTFWLRN-LGVFSGSVLDMMIVVITITT-GSVVVMWLGEEVSDHGIGNGISLLIFAGI 183
Query: 256 ISYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSR 314
++ +P + RT + + +++ L II +++V G V +QE +R++P+ YA R
Sbjct: 184 VARIPEAIVRTWSMVRLGEMSFLVLLIAIIVMVVVVAGCVLLQEGQRRLPVQYAKRVVGN 243
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP 374
+S ++P +VN +GV+PIIF++S L P T+ RF K L+PG Y+
Sbjct: 244 KVYGGQSTFIPLRVNQAGVIPIIFASSVLLFPYTVTRFFSGDIASKIQAILSPGSVVYMV 303
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ LI FF+Y+YT + DP D + +K+ G I +RPGK TA +++ V+SRI++ G+V
Sbjct: 304 LYVGLIIFFSYFYTAVVFDPVDTANNMKKYGGFILGIRPGKPTAEYIEKVMSRITLGGAV 363
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
FLA +A P ++ + +T F F GT+VLI+VG A DT +++A+++ + Y+ I
Sbjct: 364 FLAAVALLPTIMTRLMGITTFY-FGGTAVLIVVGVALDTVHQIEAQLLMRHYEGI 417
>gi|365174477|ref|ZP_09361925.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
gi|363615033|gb|EHL66505.1| preprotein translocase, SecY subunit [Synergistes sp. 3_1_syn1]
Length = 431
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 253/423 (59%), Gaps = 10/423 (2%)
Query: 71 MEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTL 129
M DS F D F+ P L + L L L + RLG ++P GV+ A DQ +LL L
Sbjct: 1 MLDS---FRDTFRLPDLKRRILFTLAALFVYRLGAHVPTPGVDAAALGKLFDQGTLLGFL 57
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
D F+GG + R I +LG+ P+IN+ IV QLLA + P ++ +QK EGE GRKK++Q+TRY
Sbjct: 58 DLFAGGALSRFSIFALGVTPYINSSIVMQLLAVVVPSIEKMQK-EGEEGRKKIVQWTRYG 116
Query: 190 SVGFAIVQAIGQVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
++ FA +QA+G +LR + D +L S+TL T G+ ++GE +SD +GNG
Sbjct: 117 TIVFAFIQAVGMTGWLRGLGIYSGGMLDIILVSLTLTT-GAVAVMWLGEIMSDHGIGNGI 175
Query: 248 SLLIFTSIISYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
SLLIF I+ +P + RTV+ + N + + II + ++ G V +QE +R++P+
Sbjct: 176 SLLIFAGIVVRIPEAIIRTVSLVRLGEMNVLVMLLAIIIMVAVIAGCVMLQEGQRRLPVQ 235
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
YA R +S+++P +VN++GV+PIIF++S L P T+A + + A++
Sbjct: 236 YAKRMVGNKMYGGQSSFIPLRVNTAGVIPIIFASSVLLFPYTIAGLFQHSIARMIQQAMS 295
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P Y+ +L+I FF+Y+YT + P+D+S +K+ G I +RPGK T +++ V+
Sbjct: 296 PSSPIYMILYVLMIIFFSYFYTAVVFKPEDISNNMKKNGGFILGIRPGKPTTDYIEKVMG 355
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
RI++ GS+ LA++A P V+ ++ F F GT+V+I+VG A DT +++ +++ + Y
Sbjct: 356 RITLGGSIALAVIAIIPTVMTGLMNINTFY-FGGTAVIIVVGVALDTVHQIEGQLLMRHY 414
Query: 487 KNI 489
+ I
Sbjct: 415 EGI 417
>gi|251772510|gb|EES53076.1| preprotein translocase, SecY subunit [Leptospirillum
ferrodiazotrophum]
Length = 437
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 257/419 (61%), Gaps = 14/419 (3%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSG 134
F + +K P L + + L LA+ R+G YIP GVN L QN +L+ D FSG
Sbjct: 9 FENIWKIPELRQRVIFTLAMLAVYRIGAYIPTPGVNGTELSKFLHQNGGALIGFFDMFSG 68
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + R I +LGI+P+I+A I+ QLL ++P LQ L K EGE GRK + +YTRY +V A
Sbjct: 69 GALSRFTIFALGIMPYISASIILQLLTVVHPALQALSK-EGERGRKIITKYTRYLTVLIA 127
Query: 195 IVQAIGQVLYLRP-----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
++Q+ G L L +V + L V LT + F +IGE+I++ +GNG SL
Sbjct: 128 MIQSFGIALGLEKMNNGQFVAHPGWGFRLMVVITLTAATTFVMWIGEQITERGVGNGISL 187
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIG--LATIIISFILLVLGIVYVQEAERKIPINY 307
+IF+ I++ +P++ T + FQ+ G L +I+ I ++ IV+++ A RKIP+ Y
Sbjct: 188 IIFSGIVARMPSAIFSTY-KLFQEQEISGFVLLAVIVMVISVIAAIVFIETARRKIPVEY 246
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R S +S ++PFK+N++GV+P IF++S ++ P T+A F + ++ +L P
Sbjct: 247 AKRLVSNRLVAGQSTHIPFKINTAGVIPPIFASSLISFPATIAGFIAVPWVQSIGKSLAP 306
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y +LLI FF+++YT + ++P D++E +++ G IP +RPGK+TA F+ V++R
Sbjct: 307 GSFSYTVLYVLLILFFSFFYTAVVMNPADIAENIQKYGGFIPGIRPGKNTATFIYNVMNR 366
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
I+++G+++LA++ P ++ H+ + F GTS+LI++G + DT+++++A ++S+ Y
Sbjct: 367 ITLVGAIYLALVCVIPEILINQLHVPFY--FGGTSLLIVIGVSLDTSQQIEAYMMSRNY 423
>gi|206602695|gb|EDZ39176.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'5-way CG']
Length = 437
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 254/411 (61%), Gaps = 15/411 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L +G LA+ R+G YIP GVN A L QN +L+ D FSGG + RL I +LG
Sbjct: 21 RILFTIGMLAVYRIGAYIPTPGVNGNALSQFLHQNGGALIGFFDMFSGGALSRLTIFALG 80
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL ++P LQ + K EGE GRK + +YTRY +V A+VQ+ G L L
Sbjct: 81 IMPYISASIILQLLTVVHPTLQAMAK-EGERGRKIITRYTRYLTVVIALVQSFGIALGLE 139
Query: 207 PYVN-DF--STDWVLTSVTLLTLGSA--FTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
N F W + ++TL +A F +IGE+I++ +GNG SL+IF+ II+ LPA
Sbjct: 140 GMNNGQFVPHPGWSFRFIVVITLTAATTFVMWIGEQITERGVGNGISLIIFSGIIARLPA 199
Query: 262 SFGRTVAEAFQDGNYIG---LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+ T + + G G LA I++ F L+V IV+++ A RKIPI YA R
Sbjct: 200 AIINTY-KLYNQGEISGFLILALIVMVF-LIVSSIVFIETARRKIPIQYAKRLVGNKMMG 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
+S ++PFK+N++GV+P IF++S ++ P +A F + ++ +L+PG Y +L
Sbjct: 258 GQSTHIPFKINTAGVIPPIFASSLISFPAIIAGFVSVPWIQSFGKSLSPGSFSYTGLYVL 317
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI FF ++YT + L+P D++E +++ G IP VRPG+ T +L V++RI+ +G+++L+I
Sbjct: 318 LIVFFCFFYTAVVLNPTDIAENMQKYGGYIPGVRPGQKTVEYLYRVMNRITFVGALYLSI 377
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P ++ H+ + F GTS+LI++G + DTA+++++ ++S+ Y+ I
Sbjct: 378 VCVIPELLIYQLHVPFY--FGGTSLLIVIGVSLDTAQQIESYMMSRNYEGI 426
>gi|163783354|ref|ZP_02178347.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
gi|159881462|gb|EDP74973.1| preprotein translocase SecY [Hydrogenivirga sp. 128-5-R1-1]
Length = 431
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 246/411 (59%), Gaps = 15/411 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+FL L A+ RLG +IP+ GV+ A Q +L + D FSGG + R+ + +LG
Sbjct: 17 RFLYTLFMFAIYRLGSHIPIPGVDVVALEDFFKAMQGTLFNLYDIFSGGNLSRMTVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A I+ QLL P+LQ L K EG+ GR K+ +YT+Y ++ A VQ+IG +L+
Sbjct: 77 VMPYISASIMMQLLTVAIPELQRLAKEEGDYGRYKINEYTKYLTLFVAFVQSIGIAFWLQ 136
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + ++ SV L G+ F ++GERI++ +GNG SLLIF I++
Sbjct: 137 NQTSPRGFPVVPEAGFLFIFVSVMTLVAGTMFLVWMGERITEKGIGNGMSLLIFAGIVAG 196
Query: 259 LPASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
P + ++ + + G+ +A ++ +L+++GIVY+QEAER+IP+ Y R R
Sbjct: 197 FPNAV-ISLVDRLRSGDLAPFAVAGAVVMVLLVIVGIVYIQEAERRIPVQYPRRVVGRQE 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
S YLP K+N +GV+PIIF+ S L +P ++ F + A NP FY
Sbjct: 256 YRGGSTYLPIKINPAGVIPIIFAQSLLIIPSSVLTFIQHPIAQVIYDAFNPTSIFYNFLY 315
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
++LI FF Y+YT + ++P +V++ L++ GA IP VRPG T FL+TV++R+ +G++FL
Sbjct: 316 VMLIVFFTYFYTAVMINPVEVADNLRKGGAFIPGVRPGLETQKFLETVINRLVFVGALFL 375
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++A P I ++ + F GT+ LI+VG A DT ++V+A +I++KYK
Sbjct: 376 SVVAIIPLFISLQLNVPFY--FGGTTALIVVGVALDTLKQVEANLITKKYK 424
>gi|410479106|ref|YP_006766743.1| preprotein translocase subunit SecY [Leptospirillum ferriphilum
ML-04]
gi|424867747|ref|ZP_18291527.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'C75']
gi|124514423|gb|EAY55936.1| Preprotein translocase subunit (SecY) [Leptospirillum rubarum]
gi|387221801|gb|EIJ76314.1| Preprotein translocase subunit (SecY) [Leptospirillum sp. Group II
'C75']
gi|406774358|gb|AFS53783.1| preprotein translocase subunit SecY [Leptospirillum ferriphilum
ML-04]
Length = 437
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 254/411 (61%), Gaps = 15/411 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L +G LA+ R+G YIP GVN A L QN +L+ D FSGG + RL I +LG
Sbjct: 21 RILFTIGMLAVYRIGAYIPTPGVNGNALSQFLHQNGGALIGFFDMFSGGALSRLTIFALG 80
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL ++P LQ + K EGE GRK + +YTRY +V A+VQ+ G L L
Sbjct: 81 IMPYISASIILQLLTVVHPTLQAMAK-EGERGRKIITRYTRYLTVLIALVQSFGIALGLE 139
Query: 207 PYVN-DF--STDWVLTSVTLLTLGSA--FTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
N F W + ++TL +A F +IGE+I++ +GNG SL+IF+ II+ LPA
Sbjct: 140 GMNNGQFVPHPGWSFRFIVVITLTAATTFVMWIGEQITERGVGNGISLIIFSGIIARLPA 199
Query: 262 SFGRTVAEAFQDGNYIG---LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+ T + + G G LA +++ F L+V IV+++ A RKIPI YA R
Sbjct: 200 AIINT-YKLYNQGEISGFLILALVVMVF-LIVSSIVFIETARRKIPIQYAKRLVGNKMMG 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL 378
+S ++PFK+N++GV+P IF++S ++ P +A F + ++ +L+PG Y +L
Sbjct: 258 GQSTHIPFKINTAGVIPPIFASSLISFPAIIAGFVSVPWIQSFGKSLSPGSFSYTGLYVL 317
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI FF ++YT + L+P D++E +++ G IP VRPG+ T +L V++RI+ +G+++L+I
Sbjct: 318 LIVFFCFFYTAVVLNPTDIAENMQKYGGYIPGVRPGQKTVEYLYRVMNRITFVGALYLSI 377
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P ++ H+ + F GTS+LI++G + DTA+++++ ++S+ Y+ I
Sbjct: 378 VCVIPELLIYQLHVPFY--FGGTSLLIVIGVSLDTAQQIESYMMSRNYEGI 426
>gi|206900395|ref|YP_002250720.1| preprotein translocase, SecY subunit [Dictyoglomus thermophilum
H-6-12]
gi|206739498|gb|ACI18556.1| preprotein translocase, SecY subunit [Dictyoglomus thermophilum
H-6-12]
Length = 419
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 236/412 (57%), Gaps = 11/412 (2%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
F+ P L K L L A+ RLG +IP+ GV+R A L LD F+GG + R
Sbjct: 9 FRIPDLRKKILFTLFIFAVYRLGAHIPVPGVDRVALANLFRSQGALGFLDLFTGGALARF 68
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I S+GI+PFINA I+ +LL + P L +L+K E GRKK+ +Y R SV A ++A G
Sbjct: 69 SIFSMGIIPFINASIMMELLTAVFPSLAELKKEED--GRKKLTRYARNLSVLLAAIEAFG 126
Query: 201 QVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+++ + + S +V++SV LT GS F ++GE+IS +GNG SLLI TSI++
Sbjct: 127 LTIFMHNFKVIPSLSPLYVVSSVITLTAGSTFIMWLGEQISQYGIGNGVSLLILTSIVAR 186
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISF---ILLVLGIVYVQEAERKIPINYASRYTSRS 315
P RT A IG+ +I F IL+++G+V+ + AER+IP+ Y+ R R
Sbjct: 187 FPTDLARTFA--LLSRGEIGVLNVIAFFALLILIIIGVVWEESAERRIPVQYSRRIVGRR 244
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
+S YLP K+N +GV+PIIF+ + L +P T I LK +P Y
Sbjct: 245 VYGGQSTYLPLKLNQAGVIPIIFAITILMVPQTFIPVVKIGWLKAFLSIFSPSSVLYPII 304
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LL+ F Y+Y+ + DP D++E K+ G IP VRPGK T +L+ L+R++ G VF
Sbjct: 305 YFLLVLGFTYFYSSIVFDPADLAENFKKYGGFIPGVRPGKPTEEYLQRTLNRLNFFGGVF 364
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
L I+A P IE+ T +T F+ GTS+LI+VG +T + ++A++I + Y+
Sbjct: 365 LGIIALLPTFIERITGVTEFQ-LGGTSILIMVGVILETIKALEAQMIMKSYE 415
>gi|217967388|ref|YP_002352894.1| preprotein translocase subunit SecY [Dictyoglomus turgidum DSM
6724]
gi|217336487|gb|ACK42280.1| preprotein translocase, SecY subunit [Dictyoglomus turgidum DSM
6724]
Length = 419
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 236/412 (57%), Gaps = 11/412 (2%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
F+ P L K L L A+ RLG +IP+ GV+R A L LD F+GG + R
Sbjct: 9 FRIPDLRKKILFTLFIFAVYRLGAHIPVPGVDRVALANLFRSQGALGFLDLFTGGALSRF 68
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I S+GI+PFINA I+ +LL + P L +L+K E GRKK+ +Y R SV A ++A G
Sbjct: 69 SIFSMGIIPFINASIMMELLTAVFPSLAELKKEED--GRKKLTRYARNLSVLLAAIEAFG 126
Query: 201 QVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+++ + + S +V++SV LT GS F ++GE+IS +GNG SLLI TSI++
Sbjct: 127 LTIFMHNFKVIPSLSPLYVISSVITLTAGSTFIMWLGEQISQYGIGNGVSLLILTSIVAR 186
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISF---ILLVLGIVYVQEAERKIPINYASRYTSRS 315
P RT A IG+ +I F IL+++G+V+ + AER+IP+ Y+ R R
Sbjct: 187 FPTDLARTFA--LLSRGEIGILNVIAFFALLILIIIGVVWEESAERRIPVQYSRRIVGRR 244
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
+S YLP K+N +GV+PIIF+ + L +P T ++ LK +P Y
Sbjct: 245 VYGGQSTYLPLKLNQAGVIPIIFAITILMVPQTFIPVAKVSWLKAILGIFSPNSVLYPII 304
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LL+ F Y+Y+ + DP D++E K+ G IP VRPGK T +L L+R++ G VF
Sbjct: 305 YFLLVLGFTYFYSSIVFDPADLAENFKKYGGFIPGVRPGKPTEEYLAKTLNRLNFFGGVF 364
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
L I+A P IE+ T +T F+ GTS+LI+VG +T + ++A++I + Y+
Sbjct: 365 LGIIALLPTFIERLTGVTEFQ-LGGTSILIMVGVILETIKTLEAQMIMKSYE 415
>gi|87300895|ref|ZP_01083737.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
gi|87284766|gb|EAQ76718.1| preprotein translocase SecY [Synechococcus sp. WH 5701]
Length = 438
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 243/394 (61%), Gaps = 8/394 (2%)
Query: 104 IYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
IYIP+ G++R AF + Q L+ LD F+GGGI LG+ +LGI+PFINA I+ QLL
Sbjct: 42 IYIPVPGIDRVAFQQFIQQGGQLIGFLDIFTGGGISTLGVFALGILPFINASIILQLLTA 101
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYV--NDFSTDWVLTS 220
P+L+DLQK EGEAGR+K+ Q TRY ++G+ ++Q+ L LR Y +V+ +
Sbjct: 102 ALPQLEDLQKNEGEAGRRKIAQITRYVALGWGLLQSTVFALILRQYALPGIPMPVFVIQT 161
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIG 278
L G+ +I E I++ +G G SL+IF +I++ LP + G TV AE+ G
Sbjct: 162 TLALVTGAMVVMWISEVITERGIGQGASLVIFVNIVATLPRALGSTVKLAESGDRATIGG 221
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
+ +++ F++ ++GI++VQE R+IPI A R ++ R +YLP K+N+ GVMPIIF
Sbjct: 222 IVVLVLIFLVTIVGIIFVQEGSRRIPIVSAKRQVGQASLASRQSYLPLKLNAGGVMPIIF 281
Query: 339 STSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPD 395
+++ + LP T+A T L + A LNP S Y LI F+ +Y L ++P
Sbjct: 282 ASAVVFLPLTIANITRAPWLIQLAGYLNPNSSTPWLYALIFFALICGFSLFYASLTINPI 341
Query: 396 DVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAF 455
D++ LKR G +IP VRPG +TA +L V +R+++LG +FL +A P+ +E T + F
Sbjct: 342 DIATNLKRGGVAIPGVRPGSATAQYLSGVQNRLTLLGGLFLGAVAIIPSAVEGATQVRTF 401
Query: 456 RGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+G TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 402 QGLGATSLLILVGVAIDTAKQVQTYVISQRYEGM 435
>gi|339445892|ref|YP_004711896.1| preprotein translocase subunit SecY [Eggerthella sp. YY7918]
gi|338905644|dbj|BAK45495.1| preprotein translocase subunit SecY [Eggerthella sp. YY7918]
Length = 428
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 247/419 (58%), Gaps = 14/419 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGG 136
D FK P L K L L LAL R G Y+P+ G+ F Q+ ++ LD F+GG
Sbjct: 7 DAFKVPELRKKILFTLAILALYRFGAYVPVPGIPFNEFANQFTQSGGVSMTMLDLFTGGA 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TRY ++G ++
Sbjct: 67 LSNFSVFSLGIMPYITASIIMQLMQGVIPAIGRWAK-EGETGRRKITQVTRYLTLGLGLI 125
Query: 197 QAIGQVLYLR--PYVNDFSTDW--VLTSVTL---LTLGSAFTTYIGERISDLKLGNGTSL 249
AIG +L + Y FST+ +LT + + L G+AF ++GE I+ +GNG SL
Sbjct: 126 NAIGYLLLFKSPAYGVVFSTEVPEILTDIIVVFTLVAGTAFIMWMGELITQRGVGNGMSL 185
Query: 250 LIFTSIISYLPASFGRTVAEAFQD-GNYIGLATIIISFILLVL-GIVYVQEAERKIPINY 307
+IF SI+S +P++ ++ ++ D G I + +I+ +L + I++V+ A+R+IP+NY
Sbjct: 186 IIFVSIVSRVPSAIYSSITQSSADAGMSIAITVLIVLVVLACIPAIIFVERAQRRIPVNY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R R +S Y+P KVN++GV+PIIF++ + P LA + L A A++
Sbjct: 246 AKRVQGRKMMGGQSTYIPLKVNAAGVIPIIFASCLIYFPAQLAALFNVGWLTAVADAISS 305
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G ++ T +LLI FF Y+YT + +PD+ ++ L++QG IP VRPG +T ++K VL R
Sbjct: 306 GWVNWILT-VLLIVFFAYFYTSMVFNPDETADNLRKQGGFIPGVRPGSATVQYIKNVLHR 364
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+++ G +F+A++A P +I T + F GTS+LI++G A DT KV++++ Y
Sbjct: 365 VTLPGGIFIAVIAVVPTIIFYFTGNQLVQAFGGTSILIMIGVALDTMNKVESQLKMHNY 423
>gi|51209926|ref|YP_063590.1| preprotein translocase subunit SecY [Gracilaria tenuistipitata var.
liui]
gi|50657680|gb|AAT79665.1| preprotein translocase secY subunit [Gracilaria tenuistipitata var.
liui]
Length = 411
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 243/385 (63%), Gaps = 1/385 (0%)
Query: 105 YIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIN 164
+IP+ G++ + N++ N L++ L+ FSGGG +GI +LGIVP+INA I+ QLL ++
Sbjct: 26 FIPVPGIDHTSLNNNINNNGLINFLNIFSGGGFSTIGIFALGIVPYINASIMMQLLTKLI 85
Query: 165 PKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLL 224
P+L++LQK EGE+GR+K+ Q TRY ++ ++I+Q+IG L+++PYV +++ ++L S+ L
Sbjct: 86 PELENLQKEEGESGRQKIGQLTRYFTLIWSILQSIGISLWIKPYVFNWNYYFILDSIIAL 145
Query: 225 TLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII 284
GS + E I++ +GNG SLLIF +IIS +P + + I + + +
Sbjct: 146 GTGSLIIMWFAEIITEYGIGNGASLLIFQNIISGIPKNIQNYKINIYDKQTIINGSFLFL 205
Query: 285 SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLA 344
F+L+++ + +QE +RKI I A + + + RS Y+P K+N GVMPI+F+++++A
Sbjct: 206 LFVLILIINILIQECKRKIMIVSAKQLSKFTTSNPRS-YIPLKLNQGGVMPIVFASATMA 264
Query: 345 LPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQ 404
LP + + + PG Y P LI F+Y+YT L L+PDD++E L +
Sbjct: 265 LPIYFSNNIEVPNINNVINLFLPGRILYFPAYGSLIIAFSYFYTSLVLNPDDIAENLNKM 324
Query: 405 GASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVL 464
GASIP +RPG T ++ +L +++ +G VFL I+A P++I TH + +G TS+L
Sbjct: 325 GASIPSIRPGSDTIRYISKILDKMTFMGGVFLFIIALIPSLIAYITHTSLLQGLGTTSLL 384
Query: 465 ILVGCATDTARKVQAEIISQKYKNI 489
ILVG A DTA+++Q IISQ+Y NI
Sbjct: 385 ILVGVAIDTAKQIQTYIISQQYDNI 409
>gi|220917141|ref|YP_002492445.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954995|gb|ACL65379.1| preprotein translocase, SecY subunit [Anaeromyxobacter dehalogenans
2CP-1]
Length = 447
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 254/430 (59%), Gaps = 17/430 (3%)
Query: 71 MEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTL 129
M +S F F L + + LG LA+ RLGI++ GV+R A + Q SLL L
Sbjct: 1 MAAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLL 60
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
+ FSGG +L I +LGI+P+++A I+ QLL + P L+ +QK EGE GR+K+ QYTRY
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQK-EGELGRRKITQYTRYG 119
Query: 190 SVGFAIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
+V + +Q G YL V D + L ++ L G+AF ++GE+I++
Sbjct: 120 TVILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQITER 179
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI-GLATIIISFILLVL--GIVYVQE 298
+GNG SL+IF I++ +PA+ TV + G+ + GL ++++ +++V+ IVYV+
Sbjct: 180 GVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYVER 239
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL 358
+R+IPI YA R R +S +LP KVN+SGV+P IF++S L LP T+A + L
Sbjct: 240 GQRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGW--FPFL 297
Query: 359 KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
++ + A+ G Y + LI FF Y+YT + +P DV++ LK+ G IP +RPGK TA
Sbjct: 298 QRMSNAIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTA 357
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQ 478
++ VLSRI+ G+++LA + P +I + + F GTS+LI+VG A DT ++++
Sbjct: 358 DYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFY--FGGTSLLIVVGVALDTVQQIE 415
Query: 479 AEIISQKYKN 488
+I++ Y+
Sbjct: 416 GHLITRHYEG 425
>gi|114778804|ref|ZP_01453611.1| SecY protein [Mariprofundus ferrooxydans PV-1]
gi|114550935|gb|EAU53499.1| SecY protein [Mariprofundus ferrooxydans PV-1]
Length = 446
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 255/428 (59%), Gaps = 20/428 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
FGD K P L + L LG L + R+G +IP+ G++ Q SLL D FSG
Sbjct: 12 FGDIGKIPELKSRILFTLGMLIVYRIGAHIPVPGIDAGVLAQFFSQAKGSLLGMFDMFSG 71
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + RL I +LGI+P+I+A I+ QL+ ++PKL+ L K+EGE+GR+K+ +YTRY +VG A
Sbjct: 72 GALSRLTIFALGIMPYISAAIIIQLMTVVSPKLEQL-KKEGESGRRKITEYTRYGTVGLA 130
Query: 195 IVQAIGQVLYLRPY-------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
I QAIG + L + V D + +V L G+ F ++GE++++ +GNG
Sbjct: 131 IFQAIGISIGLESFSVGGQSVVIDPGMAFRAMTVITLVTGTIFLMWVGEQVTERGIGNGI 190
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATI-IISFILLVLG-IVYVQEAERKIPI 305
SL+IF I++ LP + G T+ E + G + + + + L V G +V+ + A+R+IPI
Sbjct: 191 SLIIFGGIVAGLPHAVGSTL-ELARTGEFSAFTVLGLFAMSLAVTGAVVWFERAQRRIPI 249
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKA 361
YA R ++++LP KVN++GV+P IF++S + LP T A+FT G A L
Sbjct: 250 QYAKRQVGNRMYGGKASFLPLKVNTAGVIPPIFASSLILLPATFAQFTKGVDGFAWLGDL 309
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ AL+PG Y+ LI FF ++YT + DP D ++ LK+ G IP +RPG+ TA ++
Sbjct: 310 SAALSPGAWLYMALFTGLIVFFCFFYTAIVFDPKDTADNLKKHGGFIPGIRPGQKTADYV 369
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
+VL+RI+V+G+ +++++ P + + L+ F GTS+LI+V DT ++Q+ +
Sbjct: 370 DSVLTRITVVGAAYVSMVCLLPQWL--ISELSVPFYFGGTSLLIVVVVTMDTMGQIQSHL 427
Query: 482 ISQKYKNI 489
+S +Y+ +
Sbjct: 428 MSHQYEGL 435
>gi|373489028|ref|ZP_09579691.1| protein translocase subunit secY/sec61 alpha [Holophaga foetida DSM
6591]
gi|372004504|gb|EHP05143.1| protein translocase subunit secY/sec61 alpha [Holophaga foetida DSM
6591]
Length = 448
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 162/407 (39%), Positives = 243/407 (59%), Gaps = 29/407 (7%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQ-NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
RLG+++ + GVN EA N+ + LL+ +D FSGG + + +LGI P+I A IV QL
Sbjct: 28 RLGVHVSVPGVNAEALAKNIGKAGDLLNVVDLFSGGAFKKFSVFALGITPYITASIVLQL 87
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWV-- 217
L + P +++LQK+EGEAGR+KV Q+TRY +VG A VQ G + TD V
Sbjct: 88 LGAVVPSIENLQKKEGEAGRQKVNQWTRYLTVGLAFVQGFG----IASLAQGMGTDVVAN 143
Query: 218 -------LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
L + TL T G+ F +IGE+I+D LGNG SLLIF I++ LP T+
Sbjct: 144 PGLGFKLLCAWTLAT-GTIFVMWIGEQITDRGLGNGISLLIFAGIVAGLPKG-ATTLGAM 201
Query: 271 FQDG--NYIGLATIIISFILL-------VLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
F+D N +A + FILL ++ +V V+ A R+IPI+YA R S QRS
Sbjct: 202 FRDSVMNKGNVAPPGV-FILLAAAMVVVLIAVVLVESAYRRIPIHYARRSDSSRMASQRS 260
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF--YLPTNILL 379
+Y+P KVN++GVMP+IF++S + P T+ +FT L KA+ LNP F Y P + +
Sbjct: 261 SYMPLKVNTAGVMPVIFASSVIFFPATIGQFTRWEWLAKASSFLNPSAHFWIYTPVFVGV 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ FF ++YT + +PD+ +E +KR G IP +RPGK T+ ++ +LS+++ G+V+LA++
Sbjct: 321 VIFFAFFYTSIVFNPDETAENMKRSGGYIPGIRPGKETSVYMDGILSKLTFAGAVYLALI 380
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+ P VI + F F GTS+LI+VG A DT ++++ + + Y
Sbjct: 381 SIVPLVITNSMPGLNFY-FGGTSLLIVVGVAMDTVSQLESYQVMRHY 426
>gi|119502944|ref|ZP_01625029.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
gi|119461290|gb|EAW42380.1| protein translocase subunit SecY [marine gamma proteobacterium
HTCC2080]
Length = 434
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 258/419 (61%), Gaps = 20/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + +L L + R+G +IP+ G++ E DQN ++L + FSGG + R+
Sbjct: 7 GELFARLRFVLVALIIYRIGTHIPVPGIDPEQLAALFDQNQGTILGLANVFSGGALERMS 66
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ L++ ++P+L+ + K+EGEAGR+K+ QYTRY +V A+VQA G
Sbjct: 67 ILALGILPYISASIIMNLMSAVSPQLEQI-KKEGEAGRRKISQYTRYLTVALALVQATGM 125
Query: 202 VLYL--RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+ L + D S + + ++T L G+ F ++GE+I++ +GNG SLLIF I + L
Sbjct: 126 TVGLANQGLAFDTSVSFYVIAITSLVTGAVFMMWLGEQITERGIGNGISLLIFAGIAAGL 185
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+++ +A Q + N + L I+ ++++ +V+++ +R++ +NYA R R
Sbjct: 186 PSAVGQSLEQARQGELNILVLLAIVALAVIVIYLVVFIERGQRRVTVNYAKRQQGRQSYQ 245
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLP 374
+S++LP KVN SGV+P IF++S L P +LA++ G L+ AVA+ PG P
Sbjct: 246 AQSSHLPLKVNMSGVIPAIFASSILLFPASLAQWFGSGDSSDWLQDFAVAIGPGQ----P 301
Query: 375 TNILL----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
NI+L I FF ++YT L +P DV++ LKR GA +P +RPG+ TA +L VL+R++V
Sbjct: 302 LNIMLFTGFIIFFCFFYTALMYNPKDVADNLKRSGAFVPGIRPGQQTANYLDGVLTRLTV 361
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS ++A++ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+ +
Sbjct: 362 FGSAYIALVCLLPQFLVVMFNVPFYLG--GTSMLIVVVVVMDFMAQVQSHLMSHQYEGV 418
>gi|380510011|ref|ZP_09853418.1| preprotein translocase subunit SecY [Xanthomonas sacchari NCPPB
4393]
Length = 456
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 255/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN EA + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVIGALIVYRIGCYVPVPGVNPEAMLALMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ +TV EAF+DGN +I L I+++ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPAAAIQTV-EAFRDGNMSFIALLLIVLTILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASNSTFGSVLQRIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMIVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GSV+L I+ P V+ T+F F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSVYLVIVCLLPEVMRAQLG-TSFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|197122359|ref|YP_002134310.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. K]
gi|196172208|gb|ACG73181.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. K]
Length = 447
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 250/430 (58%), Gaps = 17/430 (3%)
Query: 71 MEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTL 129
M +S F F L + + LG LA+ RLGI++ GV+R A + Q SLL L
Sbjct: 1 MAAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLL 60
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
+ FSGG +L I +LGI+P+++A I+ QLL + P L+ +QK EGE GR+K+ QYTRY
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQK-EGELGRRKITQYTRYG 119
Query: 190 SVGFAIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
+V + +Q G YL V D + L ++ L G+AF ++GE+I++
Sbjct: 120 TVILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQITER 179
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQE 298
+GNG SL+IF I++ +PA+ TV + G+ + GL + ++++ IVYV+
Sbjct: 180 GVGNGISLIIFAGIVARIPAAIYTTVRQLGASGSQLSALGLLVLTALMVVVIGAIVYVER 239
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL 358
+R+IPI YA R R +S +LP KVN+SGV+P IF++S L LP T+A + L
Sbjct: 240 GQRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGW--FPFL 297
Query: 359 KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
++ + A+ G Y + LI FF Y+YT + +P DV++ LK+ G IP +RPGK TA
Sbjct: 298 QRMSNAIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTA 357
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQ 478
++ VLSRI+ G+++LA + P +I + + F GTS+LI+VG A DT ++++
Sbjct: 358 DYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFY--FGGTSLLIVVGVALDTVQQIE 415
Query: 479 AEIISQKYKN 488
+I++ Y+
Sbjct: 416 GHLITRHYEG 425
>gi|402828224|ref|ZP_10877115.1| preprotein translocase, SecY subunit [Slackia sp. CM382]
gi|402286825|gb|EJU35287.1| preprotein translocase, SecY subunit [Slackia sp. CM382]
Length = 427
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 247/419 (58%), Gaps = 13/419 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL--LSTLDSFSGGG 136
D FK P L K L L LAL R G ++P+ G+ F + +S LD F+GG
Sbjct: 7 DAFKVPDLRNKILFTLAILALYRFGAFVPVPGIPFNEFANSFTSGGGVGMSMLDLFTGGA 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TR+ ++G ++
Sbjct: 67 LSHFSVFSLGIMPYITASIIMQLMQGVIPSVGRWAK-EGETGRRKITQVTRFMTLGLGLI 125
Query: 197 QAIGQVLYLR--PYVNDFSTDWV-----LTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
A+G + + Y F+T+ L + L +G+AF ++GE I+ +GNG SL
Sbjct: 126 NAVGYLFLFKSSAYGVVFTTEIPEIVTDLIVIVTLVVGTAFIMWMGELITQRGVGNGMSL 185
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINYA 308
+IFTSIIS LPA+ ++ G + + +II+ + L + IV+V+ A+R+IP+NYA
Sbjct: 186 IIFTSIISRLPAAIASSINTEGDFGMGLAVTILIIAVVALTIPAIVFVERAQRRIPVNYA 245
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
R R +S Y+PFKVN++GV+PIIF+++ + P +A ++ L A +L+ G
Sbjct: 246 KRVQGRRMMGGQSTYIPFKVNAAGVIPIIFASALIYFPAQIAALLNVSWLTSFANSLSTG 305
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ T ++LI FF Y+YT + +PD++SE L++QG IP +RPGK+T ++ VL R+
Sbjct: 306 PVNWVLT-MILIVFFAYFYTSMVFNPDEMSENLRKQGGFIPGIRPGKATTDYIHDVLRRV 364
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ G +F+ ++A PA++ T + F GTS+LI++G A DT KV++++ Y+
Sbjct: 365 TLPGGIFIGLIAVVPAILFYFTDNQLIQAFGGTSILIMIGVALDTMSKVESQLKMHNYE 423
>gi|218779742|ref|YP_002431060.1| preprotein translocase subunit SecY [Desulfatibacillum alkenivorans
AK-01]
gi|218761126|gb|ACL03592.1| preprotein translocase, SecY subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 435
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 252/424 (59%), Gaps = 18/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNSLLSTLDSFSG 134
F + FK P L + L G LA+ R+G++IP GV+ A Q+++L D FSG
Sbjct: 6 FQNIFKIPELKRRVLITAGLLAVYRIGVHIPTPGVDGNALAAFFAAHQDTILGLFDMFSG 65
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + RL + +LGI+P+I+A I+ QLL + P L+ L K EG+AGRKK+ QYTRY +V +
Sbjct: 66 GALERLSVFALGIMPYISASIILQLLTVVIPHLERLSK-EGDAGRKKITQYTRYGTVLLS 124
Query: 195 IVQAIGQVLYLRPYVNDFST-----DWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGT 247
I+Q G + L + W +T++TL G+AF ++GE I++ +GNG
Sbjct: 125 IIQGFGIAVGLEQMASSAGEIVPVGGWSFRIMTVITLTAGTAFIMWLGETITERGIGNGI 184
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATI--IISFILLVLG-IVYVQEAERKIP 304
SL+IF I++ PA+ +T+ +G+ T+ + F++ V+G I++V+ A+R+IP
Sbjct: 185 SLIIFAGIVARGPAAVSKTIT--LIGAGTLGVFTVAGLAIFMVAVIGLIIFVETAQRRIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
+ YA R R + +LP K+N SGV+P IF++S + P T+A+F+GI AL K A
Sbjct: 243 VQYAKRVVGRRQYGGQKTHLPLKINQSGVIPPIFASSLMMFPATIAQFSGIEALNKFAEW 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG + + I FF Y+YT + +P DV++ LK+ G IP VRPGK TA ++ V
Sbjct: 303 LTPGTGIWEIPYVAFIFFFCYFYTAVTFNPVDVADNLKKYGGYIPGVRPGKRTADYIDKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI++ G+++++ + P + + + F GT++LI+VG A DT ++++ +I++
Sbjct: 363 LTRITLGGAIYVSAVCVMPTALMVMFKVPFY--FGGTALLIVVGVALDTIAQMESHMITR 420
Query: 485 KYKN 488
Y+
Sbjct: 421 HYEG 424
>gi|373499246|ref|ZP_09589737.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
gi|404369343|ref|ZP_10974683.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|313690726|gb|EFS27561.1| preprotein translocase, SecY subunit [Fusobacterium ulcerans ATCC
49185]
gi|371959317|gb|EHO77008.1| preprotein translocase, SecY subunit [Fusobacterium sp. 12_1B]
Length = 426
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 248/398 (62%), Gaps = 16/398 (4%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G YIP G++ + Q+ +L ++ FSGG R+ I +LGIVP+INA IVF
Sbjct: 33 VARVGTYIPAPGIDVDRLATMTAQSDILGYINMFSGGAFKRVSIFALGIVPYINASIVFS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I PK++++QK +GEAGR ++ Q+TRY ++ A+VQ G ++L+ V T +
Sbjct: 93 LLAVIIPKIEEIQK-DGEAGRNRINQWTRYLTIAIAVVQGFGVCMWLQSVGLVTTPGTLF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT+V LT G+ F +IGE+IS +GNG SLLIF ++IS P+S +T+ + + +
Sbjct: 152 FLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVISGGPSSVVQTI-QTMKGSKF 210
Query: 277 IGLATIIIS--FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ I+I+ IL V GIV Q +RKIPI+Y + S GG+ +++Y+P K+NS+GVM
Sbjct: 211 LIPVLILIAGAAILTVAGIVIFQLGQRKIPIHYVGKGFSGKGGMGQNSYIPLKLNSAGVM 270
Query: 335 PIIFSTSSLALPGTL-----ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
P+IF++ + +P + +++T L A+ + Y+ ++I FF+++YT
Sbjct: 271 PVIFASVVMMIPSVIINAIPSQYTFKTTL---AMVFSQKHPVYMIVYAIVIIFFSFFYTA 327
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
+ DP+ V++ LK+ G +IP +RPG T +L+ V++RI+ G+ FLAI++ P I T
Sbjct: 328 IVFDPEKVADNLKQGGGTIPGIRPGNETVEYLEGVVTRITWGGAFFLAIISILPYTIFTT 387
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+L F F GT ++I+VG A DT +++ A ++ ++YK
Sbjct: 388 FNLPVF--FGGTGIIIVVGVAIDTVQQINAHLVMREYK 423
>gi|421500294|ref|ZP_15947305.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|402268708|gb|EJU18074.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 426
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 247/403 (61%), Gaps = 11/403 (2%)
Query: 91 LKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L LL +L ++R+G +IP GV+ + QN +L ++ FSGG R+ I +LGI+P+
Sbjct: 26 LTLLMFL-VARIGTFIPAPGVDTDRLAAMTAQNDILGYINMFSGGAFTRVSIFALGIIPY 84
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-- 208
INA IV LLA I P+++++QK EGEAGR K+ Q+TRY ++G A+VQ G ++L+
Sbjct: 85 INASIVVSLLAAIIPQIEEIQK-EGEAGRNKITQWTRYLTIGIALVQGFGVCMWLQSVGL 143
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
V + + LT++ LT G+ F ++GE+IS +GNG SLLIF ++IS PA+ +T+
Sbjct: 144 VFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGNGVSLLIFLNVISRGPANIVQTI- 202
Query: 269 EAFQDGNYI--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
+ ++ L + + IL ++GIV Q +RKIPI+Y + + GG+ +++Y+P
Sbjct: 203 QTMSGSKFLIPVLLAVAAAGILTIMGIVVFQLGQRKIPIHYVGKGFNSRGGMGQNSYIPL 262
Query: 327 KVNSSGVMPIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
K+NSSGVMP+IF++ + +P + A + A ++ N Y+ L+I FF+
Sbjct: 263 KLNSSGVMPVIFASVLMMIPTVMINAIPSKYAIKTTLSMMFNQQHPVYMIVYALVIIFFS 322
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT + DP+ V++ LKR G +IP +RPG T +L+ V++RI+ G++FLA ++ P
Sbjct: 323 FFYTAIVFDPEKVADNLKRGGGTIPGIRPGVETVEYLEGVVTRITWGGAIFLAAISILPF 382
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I L F F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 383 AIFSALGLPVF--FGGTGIIIVVGVAIDTVQQIDAHLVMRDYK 423
>gi|392413529|ref|YP_006450136.1| protein translocase subunit secY/sec61 alpha [Desulfomonile tiedjei
DSM 6799]
gi|390626665|gb|AFM27872.1| protein translocase subunit secY/sec61 alpha [Desulfomonile tiedjei
DSM 6799]
Length = 430
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 248/407 (60%), Gaps = 27/407 (6%)
Query: 97 LALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L + RLG++IP+ G+N A F G Q +L +D F+GG + + SLGI+P+I+A
Sbjct: 25 LFVYRLGVHIPVPGINTAALRDFFGKYSQ-TLFGVIDMFTGGAMENFSVFSLGIMPYISA 83
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG---------QVLY 204
I+ QLL + P L+ L K EGEAGRKK+ QYTRY +V A++Q +G ++Y
Sbjct: 84 SIILQLLTVVVPHLERLSK-EGEAGRKKITQYTRYGTVVLALIQGLGISVGLAKSEGMVY 142
Query: 205 LRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ P T +VL S+ L G+AF ++GE++++ +GNG SL+IF I++ +P++ G
Sbjct: 143 MSP------TAFVLLSMITLAAGTAFIMWLGEQMTERGIGNGISLIIFAGIVARMPSALG 196
Query: 265 RTVAEAFQDGNYIGLATIIISFILL--VLGI-VYVQEAERKIPINYASRYTSRSGGLQRS 321
TV + Q G+ IG +++ +++ V+GI V+V+ +R+IP+ YA R R +S
Sbjct: 197 HTV-QLVQTGD-IGFLVLLLLLVIMIAVIGIIVFVERGQRRIPVQYAKRVVGRRVYGGQS 254
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA 381
+LP KVN++GV+P IF++S + P T+A+F + L L PG Y + LI
Sbjct: 255 THLPLKVNTAGVIPPIFASSLIIFPATIAQFLNVPILTSITSYLRPGSFLYETIFVALII 314
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF Y+YT + +P DV+E +K+ G IP +RPGK TA ++ VL+RI+ G+++++++
Sbjct: 315 FFCYFYTAVTFNPVDVAENMKKYGGYIPGIRPGKKTAQYIDKVLTRITFGGAIYVSVVCV 374
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
P+++ + A F GTS+LI+VG A DT ++++ +I + Y+
Sbjct: 375 LPSIL--ISRFNAPFYFGGTSLLIVVGVALDTLTQIESHMIQRHYEG 419
>gi|424795698|ref|ZP_18221521.1| Preprotein translocase subunit SecY [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|433679070|ref|ZP_20510852.1| Preprotein translocase subunit secY [Xanthomonas translucens pv.
translucens DSM 18974]
gi|440732461|ref|ZP_20912390.1| preprotein translocase subunit SecY [Xanthomonas translucens
DAR61454]
gi|422795356|gb|EKU24066.1| Preprotein translocase subunit SecY [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|430815802|emb|CCP41397.1| Preprotein translocase subunit secY [Xanthomonas translucens pv.
translucens DSM 18974]
gi|440368742|gb|ELQ05767.1| preprotein translocase subunit SecY [Xanthomonas translucens
DAR61454]
Length = 456
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 254/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN EA + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPEAMLALMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ +TV EA++DGN +I L I+++ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPAASIQTV-EAYRDGNMSFISLLLIVLTILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASNSTFGSVLQRIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMIVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|365873465|ref|ZP_09412998.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
gi|363983552|gb|EHM09759.1| preprotein translocase, SecY subunit [Thermanaerovibrio velox DSM
12556]
Length = 431
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 255/424 (60%), Gaps = 12/424 (2%)
Query: 71 MEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTL 129
M DS F D F+ P L +FL +L L + RLG +IP G++ EA ++ +L L
Sbjct: 1 MIDS---FRDAFRLPDLKNRFLFVLAALFVYRLGAHIPTPGIDPEAMARLFERGGVLGFL 57
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
D F+GG + R I +LG+VP+IN+ IV QLL + P L+ +QK EGE GRKK+ QYTRY
Sbjct: 58 DLFAGGALSRFSIFALGVVPYINSSIVMQLLTVVVPSLEKMQK-EGEDGRKKITQYTRYG 116
Query: 190 SVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+V FA+VQ+IG V +LR + F D VL +V +T GS ++GE +SD +GNG
Sbjct: 117 TVIFALVQSIGMVSWLRGLGVFYGGF-LDGVL-AVATVTTGSLAVMWLGEVMSDHGIGNG 174
Query: 247 TSLLIFTSIISYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
S+LIF I++ +P + +T + N + + ++ + +V G V +QE +RK+P+
Sbjct: 175 ISMLIFAGIVARIPGAIAQTFTMVRMGEMNILVVLLALVIMVAVVAGCVMLQEGQRKLPV 234
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
YA R +S Y+P +VN++GV+PIIF++S L P T+ARF +
Sbjct: 235 QYAKRVVGNRVYGGQSTYIPLRVNTAGVIPIIFASSVLLFPYTIARFFSGPVAEAVQRIF 294
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
+PG Y+ + LI FF+++YT + +P +++E +K+ G I +RPGK TA +++ V+
Sbjct: 295 SPGSVVYMILYVALIVFFSFFYTAVVFNPAELAENMKKYGGFILGIRPGKPTADYIEKVM 354
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
SRI++ G++ LA +A P ++ ++ F F GTSVLI+VG A DT +++ +++ +
Sbjct: 355 SRITLGGALALAAVAIVPTLMSGLLNVNTFY-FGGTSVLIVVGVALDTVHQLEGQLLMRH 413
Query: 486 YKNI 489
Y+ I
Sbjct: 414 YEGI 417
>gi|383784167|ref|YP_005468736.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
gi|383083079|dbj|BAM06606.1| preprotein translocase subunit [Leptospirillum ferrooxidans C2-3]
Length = 437
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 256/425 (60%), Gaps = 14/425 (3%)
Query: 72 EDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLST 128
E S G+ K P L + L LG LA+ R+G YIP GVN A L QN +L+
Sbjct: 3 ERISKVIGNIGKIPELRQRILFTLGMLAVYRIGAYIPTPGVNGNALSAYLHQNGGALIGF 62
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
D FSGG + RL I +LGI+P+I+A I+ QLL ++P LQ L K EGE GRK + +YTRY
Sbjct: 63 FDMFSGGALSRLTIFALGIMPYISASIILQLLTVVHPSLQALAK-EGERGRKVITKYTRY 121
Query: 189 ASVGFAIVQAIGQVLYLRP-----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
+V A++Q+ G + L +V + + V LT + F ++GE+I++ +
Sbjct: 122 LTVLIALIQSFGIAIGLESMNRGQFVPHPGWPFRILVVITLTTATTFIMWLGEQITERGV 181
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATI--IISFILLVLGIVYVQEAER 301
GNG SL+IF+ II+ LP++ T + + G G I ++ ++V IV+++ A R
Sbjct: 182 GNGISLIIFSGIIARLPSAILNTY-KLYNQGEISGFLIIGLVVMVAVIVGSIVFIETARR 240
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
K+P+ YA R +S Y+P K+N++GV+P IF++S +A P T+A F + ++
Sbjct: 241 KVPVQYAKRLVGNKMMGGQSTYIPLKINTAGVIPPIFASSLIAFPATIASFITLPWIQNI 300
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+L PG Y +LLI FF+++YT + L+P D++E +++ G IP +RPG++T+ F
Sbjct: 301 GKSLAPGSFSYTLLYVLLIIFFSFFYTAVVLNPADIAENMQKYGGYIPGIRPGQNTSTFF 360
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
+++RI+++G+++L+++ P ++ H+ + F GTS+LI++G + DTA+++++ +
Sbjct: 361 YGIMNRITLVGALYLSLVCVVPELLIYKLHVPFY--FGGTSLLIVIGVSLDTAQQIESYM 418
Query: 482 ISQKY 486
+S+ Y
Sbjct: 419 MSKNY 423
>gi|194364554|ref|YP_002027164.1| preprotein translocase subunit SecY [Stenotrophomonas maltophilia
R551-3]
gi|194347358|gb|ACF50481.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
R551-3]
Length = 455
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 250/421 (59%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN +A + + Q ++ + FSGG + R I +L
Sbjct: 22 RLLFVVGALIVYRIGCYVPVPGVNPDAMLAMMQQQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVMQLAVHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 GQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + T +A++DGN +I L I I + +V+V+ +R+I +NYA R R+
Sbjct: 201 LPGAVIHTF-DAYRDGNIQFIQLLLIAIVVLAFTFFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TLA ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSTGQILQKVANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYIDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS +L I+ P ++ T L A F GTS+LI+V D +VQA ++S +Y++
Sbjct: 380 TAAGSAYLVIVCLLPELMR--TQLNASFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|254522136|ref|ZP_05134191.1| preprotein translocase, SecY subunit [Stenotrophomonas sp. SKA14]
gi|386717238|ref|YP_006183564.1| preprotein translocase secY subunit (TC 3.A.5.1.1)
[Stenotrophomonas maltophilia D457]
gi|219719727|gb|EED38252.1| preprotein translocase, SecY subunit [Stenotrophomonas sp. SKA14]
gi|384076800|emb|CCH11385.1| Preprotein translocase secY subunit (TC 3.A.5.1.1)
[Stenotrophomonas maltophilia D457]
Length = 443
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 250/421 (59%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN +A + + Q ++ + FSGG + R I +L
Sbjct: 10 RLLFVVGALIVYRIGCYVPVPGVNPDAMLAMMQQQGGGIVDMFNMFSGGALHRFSIFALN 69
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 70 VMPYISASIVMQLAVHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 128
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 129 GQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSLIIFAGIVAG 188
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + T +A++DGN +I L I I + +V+V+ +R+I +NYA R R+
Sbjct: 189 LPGAVIHTF-DAYRDGNIQFIQLLLIAIVVLAFTFFVVFVERGQRRITVNYARRQGGRNA 247
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TLA ++G AA L+K A AL PG
Sbjct: 248 YMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSFGQVLQKVANALGPG 307
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 308 EPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYIDGVLTRL 367
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS +L I+ P ++ T L A F GTS+LI+V D +VQA ++S +Y++
Sbjct: 368 TAAGSAYLVIVCLLPELMR--TQLNASFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYES 425
Query: 489 I 489
+
Sbjct: 426 L 426
>gi|190572964|ref|YP_001970809.1| preprotein translocase subunit SecY [Stenotrophomonas maltophilia
K279a]
gi|408823541|ref|ZP_11208431.1| preprotein translocase subunit SecY [Pseudomonas geniculata N1]
gi|424667224|ref|ZP_18104249.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
Ab55555]
gi|190010886|emb|CAQ44495.1| putative preprotein translocase SecY subunit [Stenotrophomonas
maltophilia K279a]
gi|401069359|gb|EJP77881.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
Ab55555]
gi|456738114|gb|EMF62791.1| Preprotein translocase secY subunit [Stenotrophomonas maltophilia
EPM1]
Length = 455
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 250/421 (59%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN +A + + Q ++ + FSGG + R I +L
Sbjct: 22 RLLFVVGALIVYRIGCYVPVPGVNPDAMLAMMQQQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVMQLAVHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 GQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + T +A++DGN +I L I I + +V+V+ +R+I +NYA R R+
Sbjct: 201 LPGAIIHTF-DAYRDGNIQFIQLLLIAIVVLAFTFFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TLA ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSFGQVLQKVANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYIDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS +L I+ P ++ T L A F GTS+LI+V D +VQA ++S +Y++
Sbjct: 380 TAAGSAYLVIVCLLPELMR--TQLNASFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|344206201|ref|YP_004791342.1| preprotein translocase subunit SecY [Stenotrophomonas maltophilia
JV3]
gi|343777563|gb|AEM50116.1| preprotein translocase, SecY subunit [Stenotrophomonas maltophilia
JV3]
Length = 455
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 250/421 (59%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN +A + + Q ++ + FSGG + R I +L
Sbjct: 22 RLLFVVGALIVYRIGCYVPVPGVNPDAMLAMMQQQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVMQLAVHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 GQVSPSGAPVVYAPGMGFVLTAVVALTAGTMFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + T +A++DGN +I L I I + +V+V+ +R+I +NYA R R+
Sbjct: 201 LPGAVIHTF-DAYRDGNIQFIQLLLIAIVVLAFTFFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TLA ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPAIFASSLLAFPATLAMWSGQAANQSSFGQVLQKVANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPLHMIVFAALITGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYIDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS +L I+ P ++ T L A F GTS+LI+V D +VQA ++S +Y++
Sbjct: 380 TAAGSAYLVIVCLLPELMR--TQLNASFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|340755353|ref|ZP_08692043.1| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|419841112|ref|ZP_14364490.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|340573497|gb|EFS24015.2| preprotein translocase, SecY subunit [Fusobacterium sp. D12]
gi|386906131|gb|EIJ70876.1| preprotein translocase, SecY subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 426
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 242/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G +IP GV+ + QN +L ++ FSGG R+ I +LGI+P+INA IV
Sbjct: 33 VARIGTFIPAPGVDTDRLAAMTAQNDILGYINMFSGGAFTRVSIFALGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I P+++++QK EGEAGR K+ Q+TRY ++G A+VQ G ++L+ V + +
Sbjct: 93 LLAAIIPQIEEIQK-EGEAGRNKITQWTRYLTIGIALVQGFGVCMWLQSVGLVFEPGLLF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT++ LT G+ F ++GE+IS +GNG SLLIF ++IS PA+ +T+ + +
Sbjct: 152 FLTTIVTLTAGTVFLMWVGEQISVKGIGNGVSLLIFLNVISRGPANIVQTI-QTMSGSKF 210
Query: 277 I--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ L + + IL ++GIV Q +RKIPI+Y + + GG+ +++Y+P K+NSSGVM
Sbjct: 211 LIPVLLAVAAAGILTIMGIVVFQLGQRKIPIHYVGKGFNSRGGMGQNSYIPLKLNSSGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +P + A + A ++ N Y+ L+I FF+++YT +
Sbjct: 271 PVIFASVLMMIPTVMINAIPSKYAIKTTLSMMFNQQHPVYMIVYALVIIFFSFFYTAIVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V++ LKR G +IP +RPG T +L+ V++RI+ G++FLA ++ P I L
Sbjct: 331 DPEKVADNLKRGGGTIPGIRPGVETVEYLEGVVTRITWGGAIFLAAISILPFAIFSALGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVF--FGGTGIIIVVGVAIDTVQQIDAHLVMRDYK 423
>gi|317485802|ref|ZP_07944666.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
gi|316922908|gb|EFV44130.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
Length = 437
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 247/414 (59%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
K L LG L R+G++IP+ GV+ A + +L D FSGGG+ + + +LG
Sbjct: 18 KLLWTLGLLCAYRIGVHIPVPGVDGGALAHFFESVAGTLFGLFDMFSGGGLRNVSVFALG 77
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL ++P+L+ + K EG AGR+K+ QYTRY++V I+Q G + L
Sbjct: 78 IMPYISASIILQLLQVVSPELKRMAKEEGAAGRRKITQYTRYSTVLITIIQGFGIAVGLE 137
Query: 207 PYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ W +T+LTL G+ ++GE+I++ +GNG SL+IF+ I+
Sbjct: 138 TMYSPGGVPVVLEPGWTFRIMTMLTLTAGTVLIMWLGEQITEKGIGNGISLIIFSGIVVG 197
Query: 259 LPASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
+P + ++ + + G+ +I LA +I+ + +++G+V+++ A+R+IPI YA R R
Sbjct: 198 IPGALVKSF-QLIKLGDMSLFIALALVIL-MVAVLIGVVFMERAQRRIPIQYAKRQVGRK 255
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
+S +LP +VN++GV+P IF++S L P T+A F LK AA P Y
Sbjct: 256 MYGGQSTHLPLRVNTAGVIPPIFASSLLLFPATMANFDIADWLKTAASWFTPSSILYNVI 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
I LI FF ++YT + DP DV+E LK+ G IP +RPG+ T +L VLSR+++ G V+
Sbjct: 316 FIALIFFFCFFYTAIIFDPKDVAENLKKAGGFIPGIRPGEKTQEYLDAVLSRLTLWGGVY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++++ P ++ ++ + F GTS+LILVG A D ++++ +IS++Y+ +
Sbjct: 376 ISVISVLPMLLIAEFNVPFY--FGGTSILILVGVAMDFMSQIESHLISRQYEGL 427
>gi|294101648|ref|YP_003553506.1| preprotein translocase subunit SecY [Aminobacterium colombiense DSM
12261]
gi|293616628|gb|ADE56782.1| preprotein translocase, SecY subunit [Aminobacterium colombiense
DSM 12261]
Length = 432
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 254/426 (59%), Gaps = 15/426 (3%)
Query: 71 MEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLST 128
M DS F D FK P L + L LG L + RLG +IP G++ A +Q + +L
Sbjct: 1 MLDS---FRDAFKLPDLKRRILFTLGVLFIFRLGAHIPTPGIDTAAMARLFEQGAGVLGF 57
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
LD F+GG + R GI +LG+ P+IN+ IVFQLL + P L+ +QK E E GRKK++Q+TR+
Sbjct: 58 LDIFAGGALRRFGIFALGVTPYINSSIVFQLLVVVFPALEKMQK-ESEDGRKKIIQFTRW 116
Query: 189 ASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNG 246
++ FA +QA+G +L + FS + +LT+ G+ ++GE I+D +GNG
Sbjct: 117 GTILFAGIQAVGMTFWL-GRLGIFSGGLFAGLIVVLTVTAGAVTVMWLGEEITDHGIGNG 175
Query: 247 TSLLIFTSIISYLPASFGRTVAE-AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
SLLIF I++ +P + R+ + N + L I +++ G + +QE +R++P+
Sbjct: 176 ISLLIFAGIVARIPEAILRSWQMLRLGEMNILVLILAIGLMFVVIAGCILLQEGQRRLPV 235
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TG-IAALKKAAV 363
YA R +S ++P KVN +GVMPIIF++S L P ++ARF TG IA + +
Sbjct: 236 QYAKRVVGNKVYGGQSTFIPLKVNQAGVMPIIFASSVLLFPYSIARFFTGNIATMVQKM- 294
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
PG Y+ I LI FF Y+YT + +P D++ +K+ G I +RPG+ T+ F++
Sbjct: 295 -FEPGSVVYIVLYISLIIFFAYFYTAVVFNPADIANNMKKYGGFILGIRPGRPTSEFIEK 353
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
V+SRI++ G+VFLAI+A P ++ +T+F F GT+VLI+VG A DT +++ +++
Sbjct: 354 VMSRITLGGAVFLAIIALLPTLMTNLMGITSFY-FGGTAVLIVVGVALDTVHQIEGQLLM 412
Query: 484 QKYKNI 489
+ Y+ I
Sbjct: 413 RHYEGI 418
>gi|21241757|ref|NP_641339.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
citri str. 306]
gi|289665157|ref|ZP_06486738.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289669364|ref|ZP_06490439.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
musacearum NCPPB 4381]
gi|294627858|ref|ZP_06706437.1| preprotein translocase SecY [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294664163|ref|ZP_06729549.1| preprotein translocase SecY [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|381171775|ref|ZP_09880915.1| preprotein translocase, SecY subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390992800|ref|ZP_10263017.1| preprotein translocase, SecY subunit [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|418518910|ref|ZP_13085039.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418522322|ref|ZP_13088359.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|21107128|gb|AAM35875.1| preprotein translocase SecY subunit [Xanthomonas axonopodis pv.
citri str. 306]
gi|292597772|gb|EFF41930.1| preprotein translocase SecY [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292606066|gb|EFF49331.1| preprotein translocase SecY [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|372552468|emb|CCF69992.1| preprotein translocase, SecY subunit [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|380687735|emb|CCG37402.1| preprotein translocase, SecY subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410701437|gb|EKQ59961.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410701936|gb|EKQ60450.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 454
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 254/420 (60%), Gaps = 23/420 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGGIGSWLQKIANALGPGE 319
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++
Sbjct: 320 PVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRLT 379
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y+++
Sbjct: 380 AAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYESL 437
>gi|269217115|ref|ZP_06160969.1| preprotein translocase, SecY subunit [Slackia exigua ATCC 700122]
gi|269129252|gb|EEZ60337.1| preprotein translocase, SecY subunit [Slackia exigua ATCC 700122]
Length = 427
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 245/419 (58%), Gaps = 13/419 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL--LSTLDSFSGGG 136
D FK P L K L L LAL R G ++P+ G+ F + +S LD F+GG
Sbjct: 7 DAFKVPDLRNKILFTLAILALYRFGAFVPVPGIPFNEFANSFTSGGGVGMSMLDLFTGGA 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TR+ ++G ++
Sbjct: 67 LSHFSVFSLGIMPYITASIIMQLMQGVIPSVGRWAK-EGETGRRKITQVTRFMTLGLGLI 125
Query: 197 QAIGQVLYLR--PYVNDFSTDWV-----LTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
A+G + + Y F+T+ L + L +G+AF ++GE I+ +GNG SL
Sbjct: 126 NAVGYLFLFKSSAYGVVFTTEIPEIVTDLIVIVTLVVGTAFIMWMGELITQRGVGNGMSL 185
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINYA 308
+IFTSIIS LP S ++ G + + +II+ + L + IV+V+ A+R+IP+NYA
Sbjct: 186 IIFTSIISRLPGSIASSINTEGDFGMGLAVTILIIAVVALTIPAIVFVERAQRRIPVNYA 245
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
R R +S Y+PFKVN++GV+PIIF+++ + P +A ++ L A +L+ G
Sbjct: 246 KRVQGRRMMGGQSTYIPFKVNAAGVIPIIFASALIYFPAQIAALLNVSWLTSFANSLSTG 305
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ T ++LI FF Y+YT + +PD++SE L++QG IP +RPGK+T ++ VL R+
Sbjct: 306 PVNWVLT-MILIVFFAYFYTSMVFNPDEMSENLRKQGGFIPGIRPGKATTDYIHDVLRRV 364
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ G +F+ ++A PA++ T + GTS+LI++G A DT KV++++ Y+
Sbjct: 365 TLPGGIFIGLIAVVPAILFYFTDNQLIQALGGTSILIMIGVALDTMNKVESQLKMHNYE 423
>gi|78046575|ref|YP_362750.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325925367|ref|ZP_08186769.1| protein translocase subunit secY/sec61 alpha [Xanthomonas perforans
91-118]
gi|346723900|ref|YP_004850569.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78035005|emb|CAJ22650.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325544245|gb|EGD15626.1| protein translocase subunit secY/sec61 alpha [Xanthomonas perforans
91-118]
gi|346648647|gb|AEO41271.1| preprotein translocase subunit SecY [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 454
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 254/420 (60%), Gaps = 23/420 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGGVGSWLQKIANALGPGE 319
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++
Sbjct: 320 PVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRLT 379
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y+++
Sbjct: 380 AAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYESL 437
>gi|345887453|ref|ZP_08838633.1| preprotein translocase, SecY subunit [Bilophila sp. 4_1_30]
gi|345041762|gb|EGW45891.1| preprotein translocase, SecY subunit [Bilophila sp. 4_1_30]
Length = 437
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 246/414 (59%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
K L LG L R+G++IP+ GV+ A + +L D FSGGG+ + + +LG
Sbjct: 18 KLLWTLGLLCAYRIGVHIPVPGVDGGALAHFFESVAGTLFGLFDMFSGGGLRNVSVFALG 77
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL ++P+L+ + K EG AGR+K+ QYTRY++V I+Q G + L
Sbjct: 78 IMPYISASIILQLLQVVSPELKRMAKEEGAAGRRKITQYTRYSTVLITIIQGFGIAVGLE 137
Query: 207 PYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ W +T+LTL G+ ++GE+I++ +GNG SL+IF+ I+
Sbjct: 138 TMYSPGGVPVVLEPGWTFRIMTMLTLTAGTVLIMWLGEQITEKGIGNGISLIIFSGIVVG 197
Query: 259 LPASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
+P + ++ + + G+ +I LA +I+ +L+ G+V+++ A+R+IPI YA R R
Sbjct: 198 IPGALVKSF-QLIKLGDMSLFIALALVILMVAVLI-GVVFMERAQRRIPIQYAKRQVGRK 255
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
+S +LP +VN++GV+P IF++S L P T+A F LK AA P Y
Sbjct: 256 MYGGQSTHLPLRVNTAGVIPPIFASSLLLFPATMANFDIADWLKTAASWFTPSSLLYNVI 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
I LI FF ++YT + DP DV+E LK+ G IP +RPG+ T +L VLSR+++ G V+
Sbjct: 316 FIALIFFFCFFYTAIIFDPKDVAENLKKAGGFIPGIRPGEKTQEYLDAVLSRLTLWGGVY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++++ P ++ ++ + F GTS+LILVG A D ++++ +IS++Y+ +
Sbjct: 376 ISVISVLPMLLIAEFNVPFY--FGGTSILILVGVAMDFMSQIESHLISRQYEGL 427
>gi|260655363|ref|ZP_05860851.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|424845175|ref|ZP_18269786.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
gi|260629811|gb|EEX48005.1| preprotein translocase, SecY subunit [Jonquetella anthropi E3_33
E1]
gi|363986613|gb|EHM13443.1| preprotein translocase, SecY subunit [Jonquetella anthropi DSM
22815]
Length = 432
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 246/419 (58%), Gaps = 11/419 (2%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
F D FK P L + + L L + R+G +IP G++ A N +L LD F+GG
Sbjct: 4 SFRDVFKLPELKRRIIFTLMMLLVFRIGAHIPTPGIDTAAMSHAFAGNGVLGFLDMFAGG 63
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ R + SLG+ P+INA IV QL I P L+ +QK EG G+KK+ QYTR+ ++ F
Sbjct: 64 ALRRFSVFSLGVAPYINASIVMQLACVIFPTLERMQK-EGPQGQKKLTQYTRWGAILFGF 122
Query: 196 VQAIGQVLYLRP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
QAIG V +LR + S D+ + T++ GS ++GE ISD +GNG S++I+
Sbjct: 123 AQAIGLVFWLRRLGVFSGGSMDFFVAICTVVA-GSIAVMWLGEEISDHGIGNGISVIIYA 181
Query: 254 SIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASR 310
I++ P RT +DG +GL T++++ ++V G V +QE +R++P+ YA R
Sbjct: 182 GIVARFPEGVIRTFG-LLRDGQ-VGLITMLVALAIMVGVLAGAVLLQEGQRRLPVQYAKR 239
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS 370
+S ++P ++N GVMPIIF++S L P T+ +F ++ +AA AL PG
Sbjct: 240 VVGNRVYGGQSTFIPLRINQGGVMPIIFASSLLIFPYTILKFFDSQSVNRAAEALAPGSW 299
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y ++LI FF Y+YT + +P +V+E +K+ G I +RPGK TA +++ V +RI++
Sbjct: 300 LYSVLYVILIVFFTYFYTAMVFNPAEVAENMKKNGGFILGIRPGKPTADYIERVATRITM 359
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+G+ L ++A P V+ +T+F F GT+VLI+VG A + ++V+++++ + Y+ I
Sbjct: 360 VGAAMLVVIALVPNVLTNVFGMTSFY-FGGTAVLIVVGVALEIVQQVESQLLMRHYEGI 417
>gi|46579734|ref|YP_010542.1| preprotein translocase subunit SecY [Desulfovibrio vulgaris str.
Hildenborough]
gi|162139897|ref|YP_967189.2| preprotein translocase subunit SecY [Desulfovibrio vulgaris DP4]
gi|387153081|ref|YP_005702017.1| preprotein translocase subunit SecY [Desulfovibrio vulgaris RCH1]
gi|46449149|gb|AAS95801.1| preprotein translocase, SecY subunit [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233525|gb|ADP86379.1| preprotein translocase, SecY subunit [Desulfovibrio vulgaris RCH1]
Length = 437
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 247/408 (60%), Gaps = 21/408 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA R+G+++P+ GV+ A QN+L D FSGGG+ L + +LGI+P+I+A
Sbjct: 26 LAAYRIGVHVPIPGVDSSALADFFASVQNTLFGLFDMFSGGGLRNLSVFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL ++P L+ L K EG AG++K+ QYTRYA+V ++Q +G + L
Sbjct: 86 IILQLLQVVSPDLKRLAKEEGAAGKRKLTQYTRYATVLITVIQGLGIAIGLESMHSPAGA 145
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V + + L ++ LT G+ ++GE+I++ LGNG SL+IF+ I++ +P ++
Sbjct: 146 PVVLEAGWAFRLVTIITLTAGTVLIMWLGEQITEKGLGNGISLIIFSGIVAGIPGGILKS 205
Query: 267 VAEAFQDGNYIGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
A+ G+ A I+I + L++ GIV+V+ A+R+IPI+YA R R ++ +L
Sbjct: 206 -AQLISAGDMSLFAAIVILALMGLVLAGIVFVERAQRRIPIHYAKRQVGRKMFGGQTTHL 264
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA--- 381
P +VN++GV+P IF++S L P T+A F LK A +P +P NIL IA
Sbjct: 265 PLRVNTAGVIPPIFASSLLLFPATVANFATSDWLKSVASWFSP---HTIPYNILFIALIV 321
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF+++YT + DP D++E LK+ G IP +RPG T ++ VL+RI++ G++++++++
Sbjct: 322 FFSFFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTKEYIDKVLTRITLWGAIYISVISV 381
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P + ++ + F GTS+LILVG A D ++++ +IS++Y+ +
Sbjct: 382 LPMFLIAQFNVPFY--FGGTSLLILVGVAMDFMSQIESHLISRQYEGL 427
>gi|120563018|gb|ABM28762.1| protein translocase subunit secY/sec61 alpha [Desulfovibrio
vulgaris DP4]
Length = 418
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 247/408 (60%), Gaps = 21/408 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA R+G+++P+ GV+ A QN+L D FSGGG+ L + +LGI+P+I+A
Sbjct: 7 LAAYRIGVHVPIPGVDSSALADFFASVQNTLFGLFDMFSGGGLRNLSVFALGIMPYISAS 66
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL ++P L+ L K EG AG++K+ QYTRYA+V ++Q +G + L
Sbjct: 67 IILQLLQVVSPDLKRLAKEEGAAGKRKLTQYTRYATVLITVIQGLGIAIGLESMHSPAGA 126
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V + + L ++ LT G+ ++GE+I++ LGNG SL+IF+ I++ +P ++
Sbjct: 127 PVVLEAGWAFRLVTIITLTAGTVLIMWLGEQITEKGLGNGISLIIFSGIVAGIPGGILKS 186
Query: 267 VAEAFQDGNYIGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
A+ G+ A I+I + L++ GIV+V+ A+R+IPI+YA R R ++ +L
Sbjct: 187 -AQLISAGDMSLFAAIVILALMGLVLAGIVFVERAQRRIPIHYAKRQVGRKMFGGQTTHL 245
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA--- 381
P +VN++GV+P IF++S L P T+A F LK A +P +P NIL IA
Sbjct: 246 PLRVNTAGVIPPIFASSLLLFPATVANFATSDWLKSVASWFSP---HTIPYNILFIALIV 302
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF+++YT + DP D++E LK+ G IP +RPG T ++ VL+RI++ G++++++++
Sbjct: 303 FFSFFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTKEYIDKVLTRITLWGAIYISVISV 362
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P + ++ + F GTS+LILVG A D ++++ +IS++Y+ +
Sbjct: 363 LPMFLIAQFNVPFY--FGGTSLLILVGVAMDFMSQIESHLISRQYEGL 408
>gi|15605676|ref|NP_213051.1| preprotein translocase subunit SecY [Aquifex aeolicus VF5]
gi|6226133|sp|O66491.1|SECY_AQUAE RecName: Full=Protein translocase subunit SecY
gi|215794644|pdb|3DL8|G Chain G, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|215794645|pdb|3DL8|H Chain H, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|2982812|gb|AAC06435.1| preprotein translocase SecY [Aquifex aeolicus VF5]
Length = 429
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 244/413 (59%), Gaps = 17/413 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
KF+ L + RLG +IP+ G+N EA L + S+ + D FSGG +GRL + +LG
Sbjct: 17 KFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A I+ QLL P LQ L K EG+ GR K+ +YT+Y ++ A VQ++G ++R
Sbjct: 77 VMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIR 136
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + ++L +V L G+ F +I +RI++ +GNG SL+IF I++
Sbjct: 137 GQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVAN 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASRYTSRS 315
P + + E + G+ IG T+++ L++ +GIVYVQEAER+IPI Y R R
Sbjct: 197 FPNAVIQ-FYEKVKTGD-IGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQ 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
R YLP K+N +GV+PIIF+ + L +P TL F +K A PG FY
Sbjct: 255 LYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFL 314
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ I FF Y+YT + ++P +++E L + GA IP VRPG+ T +L+ +++R+ G++F
Sbjct: 315 YVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALF 374
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
L+++A P +I ++ + F GT+ LI+VG A DT R+++ +I +KYK+
Sbjct: 375 LSVIALIPILISVWFNIPFY--FGGTTALIVVGVALDTFRQIETYLIQKKYKS 425
>gi|451947668|ref|YP_007468263.1| protein translocase subunit secY/sec61 alpha [Desulfocapsa
sulfexigens DSM 10523]
gi|451907016|gb|AGF78610.1| protein translocase subunit secY/sec61 alpha [Desulfocapsa
sulfexigens DSM 10523]
Length = 431
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 248/406 (61%), Gaps = 22/406 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ R+G+ +P G+N EA +N +L + FSGG + I +LGI+P+I+A
Sbjct: 24 LAVYRMGVQVPTPGINGEALAAFFAKNAGTLFGMFNMFSGGALENFSIFALGIMPYISAS 83
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL + P+L+ L K+EG +G++K+ QYTRY +VG +I+Q L+
Sbjct: 84 IIIQLLTVVIPQLETL-KKEGASGQRKITQYTRYGTVGLSIIQGTFIATGLQSMVGPGGE 142
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V + T ++L ++ LT G++F ++GE++++ +GNG SL+IF I++ PA+
Sbjct: 143 PIVLNSGTPFILMTMLTLTAGTSFIMWLGEQMTERGIGNGISLIIFAGIVARGPAA---- 198
Query: 267 VAEAFQ--DGNYIGL--ATIIISFILLVLGI-VYVQEAERKIPINYASRYTSRSGGLQRS 321
+ +FQ I L +II+F++ V+ I V+ + A+R+IPI YA R R +S
Sbjct: 199 LVNSFQLIKAGEITLFFVPLIIAFMVGVVAIIVFFETAQRRIPIQYAKRVVGRKVYGGQS 258
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA 381
++LP K+N SGV+P IF++S + P T+ F + ++KA+ A+ PG +Y I +I
Sbjct: 259 SHLPLKINISGVIPPIFASSIMMFPATIGGFVQVEWVQKASAAMAPGSFYYYILYIAMIV 318
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF ++YT + PDDV+E LK+ G +P +RPG+ TA F+ VL+R++V+G+++L+ +
Sbjct: 319 FFCFFYTAVTFKPDDVAENLKKNGGFVPGIRPGRKTADFIDKVLTRLTVVGAIYLSAVCV 378
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P ++ +L + F GT++LI+VG A DT +VQ++++ Y+
Sbjct: 379 LPTILISKFNLPFY--FGGTALLIIVGVAIDTVSQVQSQMVMTNYE 422
>gi|325294416|ref|YP_004280930.1| preprotein translocase subunit SecY [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064864|gb|ADY72871.1| preprotein translocase, SecY subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 442
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 240/411 (58%), Gaps = 15/411 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+F+ + LA+ RLG +IP G++ A Q ++ +D FSGG + +L I +LG
Sbjct: 19 RFIFTMLLLAVYRLGAHIPTPGIDVIALSEFFKRAQGTVFGFMDVFSGGALSKLTIFALG 78
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I++ I+ QLL P ++ L K EGE GR+K+ QYTRY +V A +QA+G + L
Sbjct: 79 VMPYISSAIIMQLLTVAIPSIEKLAKEEGEYGRRKINQYTRYGAVLLAFIQALGIAIGLE 138
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + ++ VT LT G+ F ++GE+I++ +GNG S+LIF I++
Sbjct: 139 SMKSPSGIPVVPNPGFTFMFVCVTCLTAGATFLMWLGEKITEKGIGNGMSILIFAGIVAS 198
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P + T F++G + + II + ++ IVY+QEAER++P+ YA R R
Sbjct: 199 IPNA-AITTFTLFKNGEISLFKIIGIISIILAMIAAIVYIQEAERRVPLQYARRNIGRQA 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
+ ++YLP K+N + V+PIIF+ S L P T+ +F + AL PG + YL
Sbjct: 258 VGKYTSYLPIKLNPANVIPIIFAASVLMFPATIVKFIHNPIAQAIYDALQPGSTLYLIVY 317
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LI FF Y+YT + +P++++E L + G IP +R G TA +L ++SR++ G+VFL
Sbjct: 318 AVLIFFFTYFYTAIIFNPEEIAENLNKHGGFIPGIRAGTDTAKYLDKIVSRLTFAGAVFL 377
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++A P +I Q L + F GT++LI+VG A DT R+++A +S Y+
Sbjct: 378 TLVAIVPLIITQKMQLPFY--FGGTAILIVVGVALDTLRRMEAYALSISYE 426
>gi|269792774|ref|YP_003317678.1| preprotein translocase subunit SecY [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100409|gb|ACZ19396.1| preprotein translocase, SecY subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 431
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 252/417 (60%), Gaps = 7/417 (1%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
F D F+ P L +FL LL L + RLG +IP G++ EA ++ +L D F+GG
Sbjct: 4 SFRDAFRLPDLKRRFLFLLAALFVYRLGAHIPTPGIDPEAMARLFERGGVLGFFDLFAGG 63
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ R I +LG+VP+IN+ IV QLL I P L+ +QK EGE GRK++ QYTRY +V FA+
Sbjct: 64 ALSRFSIFALGVVPYINSSIVMQLLTVIVPSLERMQK-EGEEGRKRITQYTRYGTVAFAL 122
Query: 196 VQAIGQVLYLRPYVNDFS--TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
+QAIG V +LR + D VL T+ T GS ++GE +SD +GNG S+LIF
Sbjct: 123 IQAIGMVSWLRGLGVFYGGILDGVLAMATVTT-GSVAVMWLGEVMSDHGIGNGISMLIFA 181
Query: 254 SIISYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I++ +P + +T + N + + + + +V G V +QE +RKIP+ YA R
Sbjct: 182 GIVARIPGAIAQTFTMVRMGEMNILVVLLALAIMVAVVAGCVMLQEGQRKIPVQYAKRVV 241
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY 372
+S Y+P +VN++GV+PIIF++S L P T+ARF AA + A +PG Y
Sbjct: 242 GNRIYGGQSTYIPLRVNTAGVIPIIFASSVLLFPYTVARFFPGAAAEAVQRAFSPGSPIY 301
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ ++LI FF Y+YT + +P +++E +K+ G + +RPGK TA +++ V++RI++ G
Sbjct: 302 VVLYVVLIVFFAYFYTAVVFNPAELAENMKKYGGFVLGIRPGKPTADYIEKVMARITLGG 361
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ LA++A P V+ ++ F F GTSVLI+VG A DT +++ +++ + Y+ I
Sbjct: 362 ALALAVVALVPTVMSGLLNVNTFY-FGGTSVLIVVGVALDTVHQLEGQLLMRHYEGI 417
>gi|21230384|ref|NP_636301.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769622|ref|YP_244384.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111940|gb|AAM40225.1| preprotein translocase SecY subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574954|gb|AAY50364.1| preprotein translocase SecY subunit [Xanthomonas campestris pv.
campestris str. 8004]
Length = 455
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 256/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP+ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSGAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGSGVGSWLQRVANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ +T T+F F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIM-RTQLGTSFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|325916507|ref|ZP_08178776.1| protein translocase subunit secY/sec61 alpha [Xanthomonas
vesicatoria ATCC 35937]
gi|325537296|gb|EGD09023.1| protein translocase subunit secY/sec61 alpha [Xanthomonas
vesicatoria ATCC 35937]
Length = 455
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 254/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A +L PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGSGVGSWLQKIANSLGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|315918285|ref|ZP_07914525.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
gi|313692160|gb|EFS28995.1| translocase SecY [Fusobacterium gonidiaformans ATCC 25563]
Length = 426
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 241/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G +IP GV+ + QN +L ++ FSGG R+ I +LGI+P+INA IV
Sbjct: 33 VARIGTFIPAPGVDTDRLAAMTAQNDILGYINMFSGGAFTRVSIFALGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I P+++++QK EGEAGR K+ Q+TRY ++ A+VQ G ++L+ V D +
Sbjct: 93 LLAAIIPQIEEIQK-EGEAGRNKITQWTRYLTIAIALVQGFGVCMWLQSVGLVFDPGILF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT++ LT G+ F ++GE+IS +GNG SLLIF ++IS P++ +T+ + +
Sbjct: 152 FLTTIATLTAGTVFLMWVGEQISVKGIGNGVSLLIFLNVISRGPSNIVQTI-QTMSGSKF 210
Query: 277 I--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ L + + IL ++GIV Q +RKIPI+Y + + GG+ +++Y+P K+NSSGVM
Sbjct: 211 LIPVLLAVAAAGILTIMGIVVFQLGQRKIPIHYVGKGFNSRGGMGQNSYIPLKLNSSGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +P + A + A ++ N Y+ L+I FF+++YT +
Sbjct: 271 PVIFASVLMMIPTVMINAIPSKYAIKTTLSMMFNQQHPVYMIVYALVIVFFSFFYTAIVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V++ LKR G +IP +RPG T +L+ V++RI+ G++FLA ++ P I L
Sbjct: 331 DPEKVADNLKRGGGTIPGIRPGIETVEYLEGVVTRITWGGALFLAAISILPFAIFSALGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVF--FGGTGIIIVVGVAIDTVQQIDAHLVMRDYK 423
>gi|384426781|ref|YP_005636138.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
raphani 756C]
gi|341935881|gb|AEL06020.1| preprotein translocase, SecY subunit [Xanthomonas campestris pv.
raphani 756C]
Length = 455
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 254/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGSGVGSWLQRIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|51244997|ref|YP_064881.1| preprotein translocase subunit SecY [Desulfotalea psychrophila
LSv54]
gi|50876034|emb|CAG35874.1| probable preprotein translocase, SecY subunit [Desulfotalea
psychrophila LSv54]
Length = 434
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 243/411 (59%), Gaps = 26/411 (6%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFI 151
L LA+ R+G+ IP G+N EA G QN +L + FSGG + I +LGI+P+I
Sbjct: 21 LMMLAVYRMGVQIPTPGINGEALAGFFAQNASTLFGMFNMFSGGALENFSIFALGIMPYI 80
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI------------ 199
+A I+ QLL + PKL+ L K+EGEAG++K+ QYTRY +V +++Q
Sbjct: 81 SASIIIQLLTVVIPKLEAL-KKEGEAGQRKITQYTRYGTVLLSVIQGSFIAKGLGSMVGP 139
Query: 200 -GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
G+ + L P + L ++ LT G+AF ++GE++++ +GNG SL+IF I++
Sbjct: 140 GGEAIVLNP-----GLHFTLMTMLTLTAGTAFIMWLGEQMTERGIGNGISLIIFAGIVAR 194
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
PA+ ++ + Q G + ++I +V IV+ + ++RKIPI YA R R
Sbjct: 195 GPAAIANSI-QLIQAGEIALFFVPVLLIFMFAIVAVIVFFETSQRKIPIQYAKRVVGRKV 253
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
+S++LP K+N +GV+P IF++S + P T+ F I +++ + A++PG FY
Sbjct: 254 YGGQSSHLPLKINVAGVIPPIFASSIMMFPATIGSFIQIDWVQRVSAAMSPGTVFYYICY 313
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+ +I FF ++Y + PDDV+E LK+ G IP +RPGK TA F+ VL+R++V+G+V+L
Sbjct: 314 VAMIVFFCFFYAAVTFKPDDVAENLKKNGGFIPGIRPGKRTALFIDKVLTRLTVVGAVYL 373
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ P ++ ++ F F GT++LI+VG + DT +V++ + + Y+
Sbjct: 374 SVVCVLPTILISQFNIPFF--FGGTALLIVVGVSIDTISQVESHLHMRNYE 422
>gi|386394144|ref|ZP_10078925.1| preprotein translocase, SecY subunit [Desulfovibrio sp. U5L]
gi|385735022|gb|EIG55220.1| preprotein translocase, SecY subunit [Desulfovibrio sp. U5L]
Length = 437
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 247/416 (59%), Gaps = 15/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L +A+ R+G+++P+ GV+ A + +N+L D FSGGG+ L I
Sbjct: 15 LKKKLLWTFLLVAVYRIGVHVPVPGVDSAALADFFESAKNTLFGLFDMFSGGGLRNLSIF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P+L +QK EG AGRKK+ QYTRY +V A++Q G +
Sbjct: 75 ALGIMPYISASIIIQLLTVVSPELAKMQKEEGAAGRKKITQYTRYGTVLIAVIQGFGIAV 134
Query: 204 YLRPYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L + + W +T++TL G+ F ++GE++++ +GNG S++I+ I
Sbjct: 135 GLESMASPTGAPVVLMSGWAFRLMTIITLAAGTVFLMWLGEQMTEKGIGNGISMIIYAGI 194
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYTS 313
++ LP + T+ + + G I+I +++ + IV+++ +R+IPI YA R
Sbjct: 195 VAGLPRAVLSTI-DLMKAGELSLFVLILIGALMIAVLYAIVFMERGQRRIPIQYAKRMVG 253
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ +LP +VN++GV+P IF++S L P TL F+ + LK A +P Y
Sbjct: 254 RKMYGGQTTHLPLRVNTAGVIPPIFASSILLFPATLGEFSHVPWLKSVASFFSPQTMTYN 313
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI FF Y+YT + DP D++E +++QG IP +RPG T ++ VL+RI++ GS
Sbjct: 314 VVFVALIVFFCYFYTAIIFDPADIAENIRKQGGFIPGIRPGAKTKEYIDKVLARITLWGS 373
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++++ P V+ Q ++ + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 374 LYISVVCVLPMVLIQQFNVPFY--FGGTSLLIVVGVAMDFMSQIESYLISRQYEGL 427
>gi|257791904|ref|YP_003182510.1| preprotein translocase subunit SecY [Eggerthella lenta DSM 2243]
gi|325829838|ref|ZP_08163296.1| preprotein translocase, SecY subunit [Eggerthella sp. HGA1]
gi|257475801|gb|ACV56121.1| preprotein translocase, SecY subunit [Eggerthella lenta DSM 2243]
gi|325488005|gb|EGC90442.1| preprotein translocase, SecY subunit [Eggerthella sp. HGA1]
Length = 426
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 247/420 (58%), Gaps = 16/420 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGI 137
D FK P L K L L LAL R G Y+P+ G+ F + D ++ LD F+GG +
Sbjct: 7 DAFKVPELRKKILFTLAILALYRFGAYVPVPGIPFNEFANSFQDSGVSMTMLDLFTGGAL 66
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TRY ++G ++
Sbjct: 67 SNFSVFSLGIMPYITASIIMQLMQGVIPAIGRWAK-EGETGRRKITQITRYLTLGLGLIN 125
Query: 198 AIGQVLYLRP--YVNDFSTDW--VLTSVTL---LTLGSAFTTYIGERISDLKLGNGTSLL 250
AIG +L + Y FST+ +LT + + L G+AF ++GE I+ +GNG SL+
Sbjct: 126 AIGYLLLFKSPQYGVVFSTEVPEILTDILVVFTLVAGTAFIMWMGELITQRGIGNGMSLI 185
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL---VLGIVYVQEAERKIPINY 307
IF SI+S +P++ ++ +G+A +++ +++ + I++V+ A+R+IP+NY
Sbjct: 186 IFVSIVSRVPSAIFSSMN--LTADTTMGVAITVVTLLVVLACIPAIIFVERAQRRIPVNY 243
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R R +S Y+P KVN++GV+PIIF++ + P LA + L A A++
Sbjct: 244 AKRVQGRKMMGGQSTYIPLKVNAAGVIPIIFASCLIYFPAQLAALFNVGWLTAVADAIST 303
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G ++ T +LLI FF Y+YT + +P++ ++ L++QG IP VRPG +T ++K VL R
Sbjct: 304 GWVNWILT-VLLIVFFAYFYTSMVFNPEETADNLRKQGGFIPGVRPGTATVTYIKNVLHR 362
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ G +F+A +A P +I T T + F GTS+LI++G A DT KV++++ Y+
Sbjct: 363 VTLPGGIFIAAIAVVPTIIFYFTGNTLIQAFGGTSILIMIGVALDTMNKVESQLKMHNYE 422
>gi|158520745|ref|YP_001528615.1| preprotein translocase subunit SecY [Desulfococcus oleovorans Hxd3]
gi|158509571|gb|ABW66538.1| preprotein translocase, SecY subunit [Desulfococcus oleovorans
Hxd3]
Length = 429
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 249/419 (59%), Gaps = 13/419 (3%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSG 134
+ + FK P L + L L LA+ R+G+ IP G++REA + + +L + FSG
Sbjct: 6 YQNIFKIPELKRRILFTLSMLAVYRIGVMIPTPGIDREALARIFEAHKGGMLGMFNMFSG 65
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I+A I+ +LL P L+ L K+EGE GRKK+ QYTRY +V +
Sbjct: 66 GALEQLSVFALGIMPYISAAIILELLTVAVPYLEQL-KKEGEQGRKKLTQYTRYGTVVLS 124
Query: 195 IVQAIGQVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
I+Q + + V D + L +V LT G+AF ++GE+I++ +GNG SL+IF
Sbjct: 125 IIQGFLMAVGIEKMGAVIDPGWSFRLMTVITLTAGTAFIMWLGEQITEKGIGNGISLIIF 184
Query: 253 TSIISYLPASF---GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
I++ LPA+ R ++ D G+ +++ + +V I+++++ +R+IPI YA
Sbjct: 185 AGIVARLPAAIINTSRMISTG--DMGIFGVLILLVFMVAVVGVIIFMEQGQRRIPIQYAK 242
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGG 369
R R +S +LP K+N+SGV+P IF++S + P T+A F + ++ + L PG
Sbjct: 243 RVVGRRMYGGQSTHLPLKINTSGVIPPIFASSIMMFPATMAGFVDVPFVQDMSAVLMPGH 302
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y + LI FF Y+YT + PDDV+E +K+QG IP +RPGK TA ++ VL+RI+
Sbjct: 303 WIYNVFFVALIFFFCYFYTAVTFKPDDVAENMKKQGGYIPGIRPGKRTADYIDRVLTRIT 362
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ G+ ++A + P ++ ++ + F GT++LI+VG A DT ++++ +I + Y+
Sbjct: 363 LGGATYVAAVCVLPTILISQFNVPFY--FGGTALLIVVGVAIDTTAQMESHMIQRSYEG 419
>gi|256830518|ref|YP_003159246.1| preprotein translocase subunit SecY [Desulfomicrobium baculatum DSM
4028]
gi|256579694|gb|ACU90830.1| preprotein translocase, SecY subunit [Desulfomicrobium baculatum
DSM 4028]
Length = 437
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 251/417 (60%), Gaps = 17/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGI 142
L KF+ LA+ R+G+++P+ GV+ A F N QN+L D FSGGG+ L I
Sbjct: 14 LKSKFIWTFLLLAVFRVGVHLPIPGVDGNALADFFAN-AQNTLFGLFDMFSGGGLMNLSI 72
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL ++P+L+ L K EG AG+KK+ QYTRY +V +++Q +G
Sbjct: 73 FALGIMPYISASIILQLLTVVSPELKRLSKEEGAAGKKKITQYTRYGTVLISVIQGLGIA 132
Query: 203 LYLRPYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTS 254
+ + + + W +T+LTL G+ F ++GE+I++ +GNG SL+I
Sbjct: 133 IGVETMTSPTGASIVYMPGWGFRFITVLTLTAGTVFIMWLGEKITEKGIGNGISLIICAG 192
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYT 312
IIS LP+ G++ F G+ +++ ++ + GI +++ A+R+IPI+YA R
Sbjct: 193 IISGLPSGIGKSY-RLFTAGDVSLFTVLLVVVVMAGVLVGITFMERAQRRIPIHYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY 372
R ++++LP ++N++GV+P IF++S L P T+A F+ + L K + P Y
Sbjct: 252 GRKMYGGQTSHLPLRINTAGVIPPIFASSILMFPATIANFSNVEILNKMSDYFRPDSIIY 311
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT + DP ++SE LK+QGA +P +RPG T ++ VL+R+++ G
Sbjct: 312 NICFVAFIVFFCFFYTAIVFDPKEISENLKKQGAFVPGIRPGFKTNEYIDKVLTRLTLWG 371
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++++++ P ++ + ++ + G GTS+LI+VG A DT +VQ+ +IS +Y +
Sbjct: 372 ALYISLVCVLPMLLMKQFNVPFYYG--GTSLLIVVGVAMDTMSQVQSHLISGRYDGL 426
>gi|153004793|ref|YP_001379118.1| preprotein translocase subunit SecY [Anaeromyxobacter sp. Fw109-5]
gi|152028366|gb|ABS26134.1| preprotein translocase, SecY subunit [Anaeromyxobacter sp. Fw109-5]
Length = 445
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 248/420 (59%), Gaps = 17/420 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+ FK L + L LG LA+ RLGIY+ GV+R+A + +LL L+ FSGG
Sbjct: 8 NIFKIAELRKRLLFTLGMLAVYRLGIYVTTPGVDRQAMQNVVSSGNLLGLLNFFSGGAFE 67
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+L I +LGI+P+++A I+ QLL + P L+ LQK EGE GR+K+ QYTRY +V A +Q
Sbjct: 68 QLSIFALGIMPYVSASIILQLLTVVVPALEKLQK-EGELGRRKITQYTRYLTVVLAAIQG 126
Query: 199 IGQVLYLRPYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLL 250
G YL + + W +T+++L G++F ++GE+I++ +GNG SL+
Sbjct: 127 YGIATYLETLRDPSGLSVVANPGWGFRLLTMISLAAGTSFIMWMGEQITERGVGNGISLI 186
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNY---IGLATIIISFILLVLGIVYVQEAERKIPINY 307
IF I++ P++ T G+ +GL ++ I+++ IV+V+ +R+IPI Y
Sbjct: 187 IFAGIVARAPSAAWATFQGFRAPGSQMSELGLVILLGIMIVVIGAIVFVERGQRRIPIQY 246
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R R +S +LP KVN++GV+P IF++S L P TL + I AL + + AL
Sbjct: 247 AKRVVGRKLYGGQSTHLPLKVNTAGVIPPIFASSLLMFPATLGGW--IPALSQLSNALQA 304
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y I LI FF Y+YT + +P DV++ LK+ G IP +RPGK TA ++ VLSR
Sbjct: 305 GSWIYNVLYIALIVFFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTADYIDYVLSR 364
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I+ G+++LA + P ++ ++ + F GTS+LI+VG A DT ++++ +I++ Y+
Sbjct: 365 ITFGGAIYLAAVCVLPTILTNEFNINFY--FGGTSLLIVVGVALDTVQQIEGHLITRHYE 422
>gi|452854017|ref|YP_007495701.1| Preprotein translocase subunit secY [Desulfovibrio piezophilus]
gi|451897671|emb|CCH50550.1| Preprotein translocase subunit secY [Desulfovibrio piezophilus]
Length = 433
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 244/425 (57%), Gaps = 33/425 (7%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L K L LA+ R+GI+IP+ GV+ A Q N+L D FSGGG+ ++ I
Sbjct: 13 LKNKLLWTFALLAVYRMGIHIPIPGVDSAALAEFFAQAQNTLFGIFDMFSGGGLSKMSIF 72
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P+L+ LQK EGEAGRKK+ QYTRY +V +VQ
Sbjct: 73 ALGIMPYISASIILQLLTVVSPELKRLQKEEGEAGRKKITQYTRYGTVLITVVQGFAIAS 132
Query: 204 YLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L P V D + L ++ LT G+ F ++GE++++ +GNG SL+I+ I
Sbjct: 133 GLESAASPTGAPMVIDPGWGFKLITILTLTSGTVFLMWLGEQMTEKGIGNGISLIIYAGI 192
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATI--IISFILLVLG---------IVYVQEAERKIP 304
++ LP + +TV L T+ I F+LL +G IV+++ +R+IP
Sbjct: 193 VAGLPGAISKTVQ----------LMTVGEISLFVLLFIGLFMAAILAFIVFMERGQRRIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R R ++ +LP K+N++GV+P IF++S L P T+A+F+ + LK A
Sbjct: 243 IHYAKRQQGRRMFGGQTTHLPLKINTAGVIPPIFASSILMFPATVAQFSNVQWLKDIASF 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+ P Y + ++ FF Y+YT + DP ++E +++QG IP +RPG T ++ V
Sbjct: 303 MTPSSIIYNILFVGIVIFFCYFYTAIMFDPKGIAENIQKQGGFIPGIRPGNRTREYIDKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI++ G+ ++A + P + + + F GTS+LI+VG A D ++++ +IS+
Sbjct: 363 LARITLWGAFYVAFVCVVPMFLISNFGVPFY--FGGTSLLIVVGVAMDFMGQIESYLISR 420
Query: 485 KYKNI 489
+Y+ +
Sbjct: 421 QYEGL 425
>gi|329893619|ref|ZP_08269753.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
gi|328923546|gb|EGG30858.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [gamma
proteobacterium IMCC3088]
Length = 443
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 265/430 (61%), Gaps = 21/430 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLG 141
G L + +L L + R+G +IP+ G++ N +Q ++L + FSGG + R+
Sbjct: 16 GELFARLRFVLVALIIYRIGTHIPVPGIDPAQLQALFNSNQGTILGLANMFSGGALERMS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QL++ + P L+ L K+EGE+GR+K+ QYTRY +VG AI+QA G
Sbjct: 76 ILALGIMPYISASIIMQLMSAVTPSLEQL-KKEGESGRRKISQYTRYLTVGLAIIQATGM 134
Query: 202 VLYLRPYVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+ + +S V + ++T L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 135 TVGMANQGMAYSVSPVFYVIAITSLVTGAIFMMWLGEQITERGVGNGISLLIFAGIVAGL 194
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+++ +A Q + N + L I+ I+++ I++++ +R+I +NYA +
Sbjct: 195 PSAIGQSLEQARQGELNILVLLGILALAIVVIYLIIFIERGQRRITVNYAKQQRGNRMYQ 254
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLP 374
+S++LP KVN +GV+P IF++S L P ++A++ G L+ AVA+ PG P
Sbjct: 255 AQSSHLPLKVNMAGVIPAIFASSILLFPASIAQWFGSGNSSDWLQDLAVAIGPGQ----P 310
Query: 375 TNILL----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
NILL I FF ++YT L +P +VS+ LKR GA IP +RPG+ TA F+ VL+R++V
Sbjct: 311 LNILLFTVFIVFFCFFYTALMFNPVEVSDNLKRSGAFIPGIRPGQQTANFIDGVLTRLTV 370
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI- 489
G+ ++A++ P + T ++ + G GTS+LI+V D +VQ+ ++SQ+Y ++
Sbjct: 371 FGAAYIALVCLLPQFLVVTWNVPFYLG--GTSLLIVVVVVMDFMAQVQSHMMSQQYDSVM 428
Query: 490 EFYDIDSYGS 499
+ ++ +YGS
Sbjct: 429 KKANLKNYGS 438
>gi|340758483|ref|ZP_08695069.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
gi|251836736|gb|EES65270.1| preprotein translocase, SecY subunit [Fusobacterium varium ATCC
27725]
Length = 426
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 246/398 (61%), Gaps = 16/398 (4%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G YIP G++ + Q+ +L ++ FSGG R+ I +LGIVP+INA IVF
Sbjct: 33 VARVGTYIPAPGIDVDRLATMTAQSDILGYINMFSGGAFKRVSIFALGIVPYINASIVFS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I PK++++QK +GEAGR K+ Q+TRY ++ AIVQ G ++L+ V +
Sbjct: 93 LLAVIIPKIEEIQK-DGEAGRNKINQWTRYLTIAIAIVQGFGVCMWLQSVGLVTTPGILF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT+V LT G+ F +IGE+IS +GNG SLLIF ++IS P+S +T+ + + +
Sbjct: 152 FLTTVVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVISGGPSSVVQTI-QTMKGSKF 210
Query: 277 IGLATIII--SFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ I+I + ++ V GIV Q +RKIPI+Y + S GG+ +++Y+P K+NS+GVM
Sbjct: 211 LIPVLILIAGAAVITVAGIVIFQLGQRKIPIHYVGKGFSGKGGMGQNSYIPLKLNSAGVM 270
Query: 335 PIIFSTSSLALPGTL-----ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
P+IF++ + +P + +++T L A+ + Y+ ++I FF+++YT
Sbjct: 271 PVIFASVVMMIPSVIINAIPSQYTFKTTL---AMVFSQKHPVYMIIYAIVIIFFSFFYTA 327
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
+ DP+ V++ LK+ G +IP +RPG T +L+ V++RI+ G+ FLAI++ P I
Sbjct: 328 IVFDPEKVADNLKQGGGTIPGIRPGNETVEYLEGVVTRITWGGAFFLAIISILPYTIFTA 387
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+L F F GT ++I+VG A DT +++ A ++ ++YK
Sbjct: 388 FNLPVF--FGGTGIIIVVGVAIDTVQQINAHLVMREYK 423
>gi|42524357|ref|NP_969737.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
HD100]
gi|39576566|emb|CAE80730.1| preprotein translocase SecY subunit [Bdellovibrio bacteriovorus
HD100]
Length = 442
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 253/421 (60%), Gaps = 31/421 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L L LA+ R+G+++P GV+ A + S + ++F+GG + + I +LG
Sbjct: 16 RILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSQGIFGLFNTFTGGALSQFSIFALG 75
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I++ I+FQLL P L+ L K+EGE GR+K+ QYTRYA+V AI+Q G +L
Sbjct: 76 IMPYISSSIIFQLLTSAIPYLEAL-KKEGEQGRRKINQYTRYATVALAIIQGYGISTWL- 133
Query: 207 PYVNDFSTD--------------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+N S D + + ++ LT G+ F ++GE+I++ +GNGTSL+IF
Sbjct: 134 --MNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITERGIGNGTSLIIF 191
Query: 253 TSIISYLPASFGRTVAEAFQDGNY-IGLATIIISFILLVLG-IVYVQEAERKIPINYASR 310
T I + +P + + E + G L ++++F++ ++ ++Y++ A+R+I + Y+ R
Sbjct: 192 TGIAAAIPGG-AQQLWELVRTGEMRFALVLLLVAFMVAIIAAVIYMEVAQRRITVQYSQR 250
Query: 311 YTSRSGGLQR----SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
GG+Q +++LP K+N SGV+P IF++S L P T+A+F LK +LN
Sbjct: 251 --QGGGGMQSMQTPTSHLPIKLNISGVIPPIFASSLLMFPATMAQFVNTPWLKALQDSLN 308
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P G+ + + LI FF+++YT + +P+DV+E LK+ G +P VR GKSTA +++ VL
Sbjct: 309 PSGAIFNIMFVALIVFFSFFYTEIVFNPNDVAENLKKYGGFVPGVRAGKSTADYIQRVLE 368
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++V+G ++L + P ++ + F GTS+LILVG A DTA+++Q+ +I+QKY
Sbjct: 369 RVNVVGCIYLCTICILPGIM--VSQFNVPFQFGGTSLLILVGVALDTAQQIQSHMITQKY 426
Query: 487 K 487
+
Sbjct: 427 E 427
>gi|220903954|ref|YP_002479266.1| preprotein translocase subunit SecY [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868253|gb|ACL48588.1| preprotein translocase, SecY subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 437
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 250/414 (60%), Gaps = 19/414 (4%)
Query: 92 KLLGY----LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSL 145
K LG+ L R+G+++P+ GV+ A Q +L S D FSGGG+ + + +L
Sbjct: 17 KRLGWTFLILCCYRIGVHVPIPGVDASALASFFQSMQGTLFSLFDMFSGGGLSNVSVFAL 76
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G++P+I+A I+ QLL I+P ++ + K EG+AGR+K+ QYTRY +V +VQ +G + L
Sbjct: 77 GVMPYISASIIMQLLQVISPDVKRMAKEEGQAGRRKLTQYTRYLTVLITLVQGLGIAVGL 136
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
P V + + + ++T T GS ++GE+I++ +GNG SL+IF I+
Sbjct: 137 ENMTSPAGTPVVLNPGWQFRMVTMTTFTAGSVLVMWLGEQITERGIGNGISLIIFCGIVV 196
Query: 258 YLPASFGRTVAEAFQDGNY-IGLATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRS 315
+P ++VA Q G+ I +A +I+ F+ VL IV+V+ ++R+IPI+YA R R
Sbjct: 197 GIPRGIIQSVA-LIQAGDMSIFMAVVIVVFMAAVLVAIVFVERSQRRIPISYAKRQVGRK 255
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
++++LP ++N++GV+P IF++S L P T+ +F+ +K AA +P G Y
Sbjct: 256 MYGGQNSHLPLRLNTAGVIPPIFASSLLLFPATIGQFSSNEYVKHAAELFSPQGVAYNVL 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ L+ FF Y+YT + DP D++E LK+ G IP +RPG+ T ++ TVL+R+++ G+ +
Sbjct: 316 YVALMFFFCYFYTAIIFDPKDMAENLKKNGGFIPGIRPGEKTQEYIDTVLTRLTLSGATY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++I+ P ++ ++ F F GTS+LILVG A D +V++ +IS +Y+ +
Sbjct: 376 ISIVCLLPMLLISNFNVPFF--FGGTSLLILVGVAMDFMNQVESHMISSQYQGL 427
>gi|429212593|ref|ZP_19203758.1| preprotein translocase subunit SecY [Pseudomonas sp. M1]
gi|428157075|gb|EKX03623.1| preprotein translocase subunit SecY [Pseudomonas sp. M1]
Length = 444
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 256/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 27 FLAIIVY----RIGAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGI 82
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ I+P+L+ L K+EGE+GR+K+ QYTRYA++ A+VQAIG + L
Sbjct: 83 MPYISASIIMQLMTAISPQLEQL-KKEGESGRRKISQYTRYATLVLALVQAIGMAVGLGS 141
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +VT G+ F ++GE+I++ +GNG S+LIF+ I++ LP + G+
Sbjct: 142 QGVAFSNDFGFYFVAVTTFVAGALFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAIGQ 201
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L + + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 202 SFESARQGDINIFALIAVGLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 261
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A A+ PG P NILL
Sbjct: 262 PLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGLGWLQDVAQAIAPGQ----PLNILLF 317
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 318 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 377
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + H+ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 378 TAVCLLPQFLVVAAHVPFYLG--GTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLK 435
Query: 496 SYG 498
YG
Sbjct: 436 GYG 438
>gi|188992834|ref|YP_001904844.1| preprotein translocase subunit SecY [Xanthomonas campestris pv.
campestris str. B100]
gi|167734594|emb|CAP52804.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 455
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 256/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP+ +TV EAF++GN +I L I+++ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSGAIQTV-EAFREGNLSFISLLLIVVTILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGSGVGSWLQRIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ +T T+F F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIM-RTQLGTSFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|384418059|ref|YP_005627419.1| preprotein translocase subunit SecY [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353460973|gb|AEQ95252.1| preprotein translocase, SecY subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 454
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 256/420 (60%), Gaps = 23/420 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 HQTAPGGAPVVYAPGLGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++ N +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREDNLSFISLVLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQASFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGGIGSWLQKIANALGPGE 319
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++
Sbjct: 320 PVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRLT 379
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++L I+ P ++ +T T+F F GTS+LI V D ++QA ++S +Y+++
Sbjct: 380 AAGSLYLVIVCLLPEIM-RTQLGTSFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYESL 437
>gi|317059785|ref|ZP_07924270.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
gi|313685461|gb|EFS22296.1| protein translocase subunit secY [Fusobacterium sp. 3_1_5R]
Length = 426
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 241/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G +IP GV+ + QN +L ++ FSGG R+ I +LGI+P+INA IV
Sbjct: 33 VARIGTFIPAPGVDTDRLAAMTAQNDILGYINMFSGGAFTRVSIFALGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I P+++++QK EGEAGR K+ Q+TRY ++ A+VQ G ++L+ + D +
Sbjct: 93 LLAAIIPQIEEIQK-EGEAGRNKITQWTRYLTIAIALVQGFGVCMWLQSVGLIFDPGILF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT++ LT G+ F ++GE+IS +GNG SLLIF ++IS P++ +T+ + +
Sbjct: 152 FLTTIATLTAGTVFLMWVGEQISVKGIGNGVSLLIFLNVISRGPSNIVQTI-QTMSGSKF 210
Query: 277 I--GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ L + + IL ++GIV Q +RKIPI+Y + + GG+ +++Y+P K+NSSGVM
Sbjct: 211 LIPVLLAVAAAGILTIMGIVVFQLGQRKIPIHYVGKGFNSRGGMGQNSYIPLKLNSSGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +P + A + A ++ N Y+ L+I FF+++YT +
Sbjct: 271 PVIFASVLMMIPTVMINAIPSKYAIKTTLSMIFNQQHPVYMIVYALVIVFFSFFYTAIVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V++ LKR G +IP +RPG T +L+ V++RI+ G++FLA ++ P I L
Sbjct: 331 DPEKVADNLKRGGGTIPGIRPGIETVEYLEGVVTRITWGGALFLAAISILPFAIFSALGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVF--FGGTGIIIVVGVAIDTVQQIDAHLVMRDYK 423
>gi|84625024|ref|YP_452396.1| preprotein translocase subunit SecY [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84368964|dbj|BAE70122.1| preprotein translocase SecY subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 454
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 256/420 (60%), Gaps = 23/420 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 HQTAPGGAPVVYAPGLGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++ N +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAMQTV-EAFREDNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQASFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGGIGSWLQKIANALGPGE 319
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++
Sbjct: 320 PVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRLT 379
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++L I+ P ++ +T T+F F GTS+LI V D ++QA ++S +Y+++
Sbjct: 380 AAGSLYLVIVCLLPEIM-RTQLGTSFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYESL 437
>gi|285017340|ref|YP_003375051.1| preprotein translocase subunit SecY [Xanthomonas albilineans GPE
PC73]
gi|283472558|emb|CBA15063.1| probable preprotein translocase subunit secy [Xanthomonas
albilineans GPE PC73]
Length = 456
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 254/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G Y+P+ GVN EA + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVIGALIVYRIGCYVPVPGVNPEAMLALMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P + +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPSFKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 HQTAPGGAPVVYAPGIGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLVIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ T+ EA++DGN +I L I+++ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPAAAIHTL-EAYRDGNMSFISLLLIVLTILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L++ A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASNTTFGSMLQRIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ +VL+R+
Sbjct: 320 EPVHMMVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDSVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P V+ + T F F GTS+LI V D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEVM-RAQFGTTFH-FGGTSLLIAVVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|15599439|ref|NP_252933.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO1]
gi|107103758|ref|ZP_01367676.1| hypothetical protein PaerPA_01004829 [Pseudomonas aeruginosa PACS2]
gi|116052278|ref|YP_788876.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152983770|ref|YP_001346243.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PA7]
gi|218889429|ref|YP_002438293.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa LESB58]
gi|296387200|ref|ZP_06876699.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAb1]
gi|313111397|ref|ZP_07797202.1| secretion protein SecY [Pseudomonas aeruginosa 39016]
gi|355652594|ref|ZP_09056854.1| preprotein translocase subunit secY [Pseudomonas sp. 2_1_26]
gi|386056756|ref|YP_005973278.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa M18]
gi|386068390|ref|YP_005983694.1| preprotein translocase subunit [Pseudomonas aeruginosa NCGM2.S1]
gi|392982099|ref|YP_006480686.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa DK2]
gi|416860432|ref|ZP_11914271.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 138244]
gi|416877950|ref|ZP_11920081.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 152504]
gi|418588002|ref|ZP_13152020.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589202|ref|ZP_13153130.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P2]
gi|419756660|ref|ZP_14283005.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137298|ref|ZP_14645288.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CIG1]
gi|421151779|ref|ZP_15611381.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
14886]
gi|421157766|ref|ZP_15617111.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
25324]
gi|421165628|ref|ZP_15623950.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
700888]
gi|421172472|ref|ZP_15630242.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CI27]
gi|421178605|ref|ZP_15636215.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa E2]
gi|421518793|ref|ZP_15965467.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO579]
gi|424938893|ref|ZP_18354656.1| secretion protein SecY [Pseudomonas aeruginosa NCMG1179]
gi|451982924|ref|ZP_21931222.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Pseudomonas
aeruginosa 18A]
gi|452877863|ref|ZP_21955112.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
VRFPA01]
gi|81783585|sp|Q9HWF5.1|SECY_PSEAE RecName: Full=Protein translocase subunit SecY
gi|9950460|gb|AAG07631.1|AE004841_9 secretion protein SecY [Pseudomonas aeruginosa PAO1]
gi|115587499|gb|ABJ13514.1| secretion protein SecY [Pseudomonas aeruginosa UCBPP-PA14]
gi|150958928|gb|ABR80953.1| secretion protein SecY [Pseudomonas aeruginosa PA7]
gi|218769652|emb|CAW25412.1| secretion protein SecY [Pseudomonas aeruginosa LESB58]
gi|310883704|gb|EFQ42298.1| secretion protein SecY [Pseudomonas aeruginosa 39016]
gi|334837564|gb|EGM16321.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 138244]
gi|334838969|gb|EGM17669.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa 152504]
gi|346055339|dbj|GAA15222.1| secretion protein SecY [Pseudomonas aeruginosa NCMG1179]
gi|347303062|gb|AEO73176.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa M18]
gi|348036949|dbj|BAK92309.1| preprotein translocase subunit [Pseudomonas aeruginosa NCGM2.S1]
gi|354823932|gb|EHF08195.1| preprotein translocase subunit secY [Pseudomonas sp. 2_1_26]
gi|375041241|gb|EHS33951.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051964|gb|EHS44425.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
MPAO1/P2]
gi|384396415|gb|EIE42833.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317604|gb|AFM62984.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa DK2]
gi|403249944|gb|EJY63410.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CIG1]
gi|404348275|gb|EJZ74624.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa PAO579]
gi|404526651|gb|EKA36853.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
14886]
gi|404537738|gb|EKA47321.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa CI27]
gi|404541190|gb|EKA50558.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
700888]
gi|404548209|gb|EKA57173.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa E2]
gi|404550291|gb|EKA59052.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa ATCC
25324]
gi|451759393|emb|CCQ83745.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Pseudomonas
aeruginosa 18A]
gi|452185419|gb|EME12437.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
VRFPA01]
gi|453042422|gb|EME90166.1| preprotein translocase subunit SecY [Pseudomonas aeruginosa
PA21_ST175]
Length = 442
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ I+P+L+ L K+EGE+GR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAISPQLEQL-KKEGESGRRKISQYTRYGTVVLALVQAIGMSVGLGS 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L + + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALIGVGLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A A+ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 TAGIVFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + H+ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAAHVPFYLG--GTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|224370671|ref|YP_002604835.1| preprotein translocase subunit SecY [Desulfobacterium autotrophicum
HRM2]
gi|223693388|gb|ACN16671.1| SecY [Desulfobacterium autotrophicum HRM2]
Length = 437
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 247/415 (59%), Gaps = 18/415 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L L + R+G+++P G++ A D + +L + + FSGG + RL +
Sbjct: 15 LKRKLLITFALLFVYRVGVHVPTPGIDGAALASFFDNARGTLFAMFNMFSGGALDRLSVF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + P L+ L K EGE GRKK+ QYTRY +V +++Q G +
Sbjct: 75 ALGIMPYISASIILQLMTVVIPHLEQLSK-EGEQGRKKITQYTRYGTVVLSLIQGFGISV 133
Query: 204 YLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L P V ++ L +V LT G+AF ++GE+I++ +GNG SL+IF I
Sbjct: 134 GLESMTSPAGSPIVMYPGWEFRLMTVITLTAGTAFIMWLGEQITERGIGNGISLIIFAGI 193
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL---GIVYVQEAERKIPINYASRYT 312
++ +P + T+ +G+ ++II +L+V I++ + A+R+IP+ YA R
Sbjct: 194 VARMPIAIANTMR--LVSTGEMGVFSLIILIVLMVAVVAAIIFFETAQRRIPVQYAKRVV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY 372
R ++++LP K+N++GV+P IF++S + P TLA F + +K A A++PG Y
Sbjct: 252 GRKMYGGQTSHLPLKINTAGVIPPIFASSIIMFPATLANFIDLPMMKTVAAAMSPGSIVY 311
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT + +PDDV+E +K+ G IP +RPGK TA ++ VL+RI+ G
Sbjct: 312 NLIFVGFIIFFCFFYTAVTFNPDDVAENMKKNGGYIPGIRPGKRTAEYIDRVLTRITTGG 371
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+V+++++ P ++ ++ + F GT++LI+VG + DT ++++ +I++ Y+
Sbjct: 372 AVYVSLVCVLPTMLMTKFNVPFY--FGGTALLIVVGVSIDTVSQIESHLITRNYE 424
>gi|325921501|ref|ZP_08183356.1| protein translocase subunit secY/sec61 alpha [Xanthomonas gardneri
ATCC 19865]
gi|325548048|gb|EGD19047.1| protein translocase subunit secY/sec61 alpha [Xanthomonas gardneri
ATCC 19865]
Length = 455
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 255/421 (60%), Gaps = 24/421 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 NQTAPGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP+ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSGAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPG 368
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGSGVGSWLQKIANALGPG 319
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R+
Sbjct: 320 EPVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRL 379
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ GS++L I+ P ++ +T T+F F GTS+LI D ++QA ++S +Y++
Sbjct: 380 TAAGSLYLVIVCLLPEIM-RTQLGTSFH-FGGTSLLIAAVVVMDFIAQIQAHLMSHQYES 437
Query: 489 I 489
+
Sbjct: 438 L 438
>gi|320108376|ref|YP_004183966.1| preprotein translocase subunit SecY [Terriglobus saanensis SP1PR4]
gi|319926897|gb|ADV83972.1| preprotein translocase, SecY subunit [Terriglobus saanensis SP1PR4]
Length = 465
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 245/448 (54%), Gaps = 40/448 (8%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFS 133
F + F+ P L + L L LA+ RLG +IP G+N E Q S L +D F+
Sbjct: 4 KFLNIFRIPDLRNRVLFTLAMLAVYRLGGHIPTPGINPEMLAQYFQQMAGSSLGLMDMFT 63
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L + +LGI+P+I A I+FQLL I L LQK EGE GR+K+ Q+TRY +V
Sbjct: 64 GGNLRKLTVFALGIMPYITASIIFQLLTVIYEPLAKLQK-EGEVGRRKITQWTRYVTVLL 122
Query: 194 AIVQAIGQVLYLR------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
AIVQ+ L L P V S ++ V LT G+AF ++GE+I++ +GNG
Sbjct: 123 AIVQSFAIALTLTKSATGAPMVTISSGKFIFLCVLTLTTGTAFIMWLGEQITERGIGNGM 182
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNY-----IGLATIIISFILLVLGIVYVQEAERK 302
SLLIFT I+ LP + + E +DG + + +A ++ I +V IV+V+ +ER+
Sbjct: 183 SLLIFTGIVVGLPRGI-QDLWEKARDGAWGGFTPVAIAILVALMIAVVAFIVFVERSERR 241
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR---FTGIAALK 359
IP+ YA R R +S +LP KVNS GVMP+IF++S L+ P A I +
Sbjct: 242 IPVQYAKRIVGRRMMGGQSTHLPLKVNSGGVMPVIFASSILSAPLLFANAQWVQNITFFR 301
Query: 360 KAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA 419
K L PG +Y + I FF Y+Y + PDD+++ +++ G IP +RPG+ T+
Sbjct: 302 KLTEGLRPGEPWYELVQFVAIIFFAYFYISIVFRPDDIADNMRKYGGFIPGIRPGRRTSD 361
Query: 420 FLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR---------------------GF 458
+L +L+RI++LG+++L I+ P ++ HL F
Sbjct: 362 YLNDILTRITLLGALYLIIITLIPTMLISGVHLNHLWLIGPVFDHLPSWITNGLGVNFYF 421
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKY 486
GTS+LI+VG A DTA ++++++I + Y
Sbjct: 422 GGTSLLIVVGVAMDTANQIESQLIMRHY 449
>gi|88704355|ref|ZP_01102069.1| preprotein translocase, SecY subunit [Congregibacter litoralis
KT71]
gi|88701406|gb|EAQ98511.1| preprotein translocase, SecY subunit [Congregibacter litoralis
KT71]
Length = 440
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 262/413 (63%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGV--NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+ N+ A + N +Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 30 RIGTHIPVPGIDPNQLAALFNQNQGTILGLANMFSGGALERMSILALGIMPYISASIIMQ 89
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L++ + P+L+ L K+EGEAGR+K+ QYTRY +V AIVQA G + + +++ +
Sbjct: 90 LMSAVTPQLEQL-KKEGEAGRRKISQYTRYLTVVLAIVQATGMTVGMANQGMSYNSGLLF 148
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ ++T L G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+++ +A Q + N
Sbjct: 149 FIIAITSLVTGAVFMMWLGEQITEKGVGNGISLLIFAGIVAGLPSAIGQSLEQARQGEIN 208
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L I+ I ++ IV+++ +R+I +NYA R R +S++LP KVN +GV+P
Sbjct: 209 ILALLLILTLAIAVIYMIVFIERGQRRITVNYAKRQQGRKMYQAQSSHLPLKVNMAGVIP 268
Query: 336 IIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P ++A++ G + L+ AVA+ PG P NILL I FF ++Y
Sbjct: 269 AIFASSILLFPASIAQWFGQSGGADWLQDLAVAIGPGQ----PLNILLFTIFIVFFCFFY 324
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P +V++ LK+ GA +P +RPG+ TA ++ VL+R++V GS ++A++ P +
Sbjct: 325 TALMFNPQEVADNLKKSGAFVPGIRPGQQTANYIDGVLTRLTVFGSAYIALVCLLPQFLV 384
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
T ++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ +YGS
Sbjct: 385 VTWNVPFYLG--GTSLLIVVVVVMDFMAQVQSHMMSHQYDSVMKKANLKNYGS 435
>gi|404495504|ref|YP_006719610.1| preprotein translocase subunit SecY [Geobacter metallireducens
GS-15]
gi|418067642|ref|ZP_12704979.1| preprotein translocase, SecY subunit [Geobacter metallireducens
RCH3]
gi|78193121|gb|ABB30888.1| preprotein translocase, SecY subunit [Geobacter metallireducens
GS-15]
gi|373558442|gb|EHP84785.1| preprotein translocase, SecY subunit [Geobacter metallireducens
RCH3]
Length = 435
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 258/424 (60%), Gaps = 17/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + F+ P L + L LG LA+ R+G +IP G++ A Q +LL D FSG
Sbjct: 5 FQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EGE+GRKK++QYTRY ++ +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPAIEKLSK-EGESGRKKIIQYTRYGTIVLS 123
Query: 195 IVQAIGQVLYL---RPYVNDF---STDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNG 246
+VQA+G + L R + S W +T++TL G+AF ++GE++S+ +GNG
Sbjct: 124 VVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVA--EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIP 304
SL+IF I++ +P + G +V + Q ++ L +++ F L++ IV+V+ +R++P
Sbjct: 184 ISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMF-LVIAAIVFVERGQRRLP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R ++++LP KVN +GV+P IF++S + P T+A F I ++ AA +
Sbjct: 243 IHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAAKS 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV++ +K+ G IP +RPGK T+ +L V
Sbjct: 303 LTPGNWVYDIFYVAFIVFFCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLDRV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L++++ G+++++ + P+++ +L + F GT++LI VG DTA ++++ +I++
Sbjct: 363 LTKLTFAGAIYISAVCVLPSILIGKFNLPFY--FGGTALLIAVGVGMDTAAQIESHLITR 420
Query: 485 KYKN 488
Y+
Sbjct: 421 SYEG 424
>gi|384085346|ref|ZP_09996521.1| preprotein translocase subunit SecY [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 443
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 251/419 (59%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L LLG L + R+G +IP+ G++ A N + ++L + FSGG + RL +
Sbjct: 20 LRNRILFLLGALLVFRIGAHIPVPGIDPAAMASFFNEQRGTILGMFNMFSGGALSRLTVF 79
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+FQL + PKL++L K+EGE+GR+K+ +YTRYA+VG A++Q +G +
Sbjct: 80 ALGIMPYISASIIFQLAGSVFPKLEEL-KKEGESGRRKITEYTRYATVGLALMQGLGIAV 138
Query: 204 YLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
+ P V D ++ T+ L G+ F +IGE+I++ +GNG SL+IF I+
Sbjct: 139 AIEKMHAGHIPVVIDPGPLFLFTTTISLACGTVFLMWIGEQITERGIGNGISLIIFAGIV 198
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP + G T E Q G + L + + + L++ +V+++ A+R++PI YA R R
Sbjct: 199 AGLPDAIGTTF-ELMQTGQFQPLFVVALFVLALLVTAFVVFMESAQRRVPIQYAKRQVGR 257
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGGS 370
+S ++P KVN SGV+P IF+TS L LP TL A G+ L + AL+PG +
Sbjct: 258 KIYGGQSTHMPLKVNMSGVIPPIFATSILLLPATLSGWFANVPGMEWLARFGQALSPGSA 317
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT + +P D ++ LK+ GA +P +RPG+ TA ++ +L+R+++
Sbjct: 318 LYVVVFTTAIVFFAFFYTAMVFNPRDTADNLKKSGAFVPGIRPGEHTARYMDRILTRLTL 377
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+++L ++ P + ++ + G GTS+LI+V D ++Q+ +++ +Y+ +
Sbjct: 378 WGAIYLTLVCLLPEFLIVQYNVPFYLG--GTSLLIVVVVMMDLMGQIQSHLLTHQYEGL 434
>gi|58583185|ref|YP_202201.1| preprotein translocase subunit SecY [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|188575510|ref|YP_001912439.1| preprotein translocase subunit SecY [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427779|gb|AAW76816.1| preprotein translocase SecY subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|188519962|gb|ACD57907.1| preprotein translocase, SecY subunit [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 454
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 253/420 (60%), Gaps = 23/420 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGGGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L+
Sbjct: 82 VMPYISASIVIQLATHIFPALKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 HQTAPGGAPVVYAPGLGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ +TV EAF++ N +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 201 LPSAAIQTV-EAFREDNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRNA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G AA L+K A AL PG
Sbjct: 260 YMNQASFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQAASGGIGSWLQKIANALGPGE 319
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ LI F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++
Sbjct: 320 PVHMLVFAALIIGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDGVLTRLT 379
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++L I+ P ++ T L F GTS+LI V D ++QA ++S +Y+++
Sbjct: 380 AAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMSHQYESL 437
>gi|86158349|ref|YP_465134.1| preprotein translocase subunit SecY [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774860|gb|ABC81697.1| protein translocase subunit secY/sec61 alpha [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 447
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 249/430 (57%), Gaps = 17/430 (3%)
Query: 71 MEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTL 129
M +S F F L + LG LA+ RLGI++ GV+R A + Q SLL L
Sbjct: 1 MAAASGLFNIFRIAELRKRLFFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLL 60
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
+ FSGG +L I +LGI+P++++ I+ QLL + P L+ +QK EGE GR+K+ QYTRY
Sbjct: 61 NFFSGGAFEQLSIFALGIMPYVSSSIILQLLTVVVPSLEKMQK-EGELGRRKITQYTRYG 119
Query: 190 SVGFAIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
+V + +Q G YL V + + L ++ L G+AF ++GE+I++
Sbjct: 120 TVVLSAIQGYGIATYLESLRAGNGVAVVGEPGWGFRLLTMVSLAAGTAFIMWMGEQITER 179
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL---GIVYVQE 298
+GNG SL+IF I++ +PA+ TV + G+ + +++ L+V+ IVYV+
Sbjct: 180 GVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLTGLGLLVLTALMVVVIGAIVYVER 239
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL 358
+R+IPI YA R R +S +LP KVN+SGV+P IF++S L LP TLA + L
Sbjct: 240 GQRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATLAGW--FPFL 297
Query: 359 KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
++ + A+ G Y + LI FF Y+YT + +P DV++ LK+ G IP +RPGK TA
Sbjct: 298 QRMSNAIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTA 357
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQ 478
++ VLSRI+ G+++LA + P +I + + F GTS+LI+VG A DT ++++
Sbjct: 358 DYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFY--FGGTSLLIVVGVALDTVQQIE 415
Query: 479 AEIISQKYKN 488
+I++ Y+
Sbjct: 416 GHLITRHYEG 425
>gi|344200767|ref|YP_004785093.1| preprotein translocase subunit SecY [Acidithiobacillus ferrivorans
SS3]
gi|343776211|gb|AEM48767.1| preprotein translocase, SecY subunit [Acidithiobacillus ferrivorans
SS3]
Length = 443
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 252/421 (59%), Gaps = 23/421 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L LLG L + R+G +IP+ G++ A +Q ++L + FSGG + RL +
Sbjct: 20 LRNRILFLLGALLVFRVGAHIPVPGIDPAAMAAFFNQQRGTILGMFNMFSGGALSRLTVF 79
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+FQL + PKL++L K+EGEAGR+K+ +YTRYA+V A++Q +G +
Sbjct: 80 ALGIMPYISASIIFQLAGSVFPKLEEL-KKEGEAGRRKITEYTRYATVILALMQGLGIAI 138
Query: 204 YLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
+ P V D ++ T+ L G+ F +IGE+I++ +GNG S++IF I+
Sbjct: 139 AIEKMHAGHFPVVIDPGPLFLFTTTISLACGTVFLMWIGEQITERGIGNGISMIIFAGIV 198
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI----VYVQEAERKIPINYASRYT 312
+ LP + G TV E + G + L +++ +L LG+ V+++ A+R+IPI YA R
Sbjct: 199 AGLPDAIGTTV-ELTKTGQFQPL--FVVALFVLALGVTGFVVFMESAQRRIPIQYAKRQV 255
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPG 368
R +S ++P KVN SGV+P IF++S + LP TL A G+ L + AL+PG
Sbjct: 256 GRKIYGGQSTHMPLKVNMSGVIPPIFASSIILLPATLSGWFANVPGMEWLARFGQALSPG 315
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
+ Y+ I FF ++YT + +P D ++ LK+ GA +P +RPG+ TA ++ +L+R+
Sbjct: 316 SALYVVVFTTAIVFFAFFYTAMVFNPKDTADNLKKSGAFVPGIRPGEHTAKYMDRILTRL 375
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+V G+++L ++ P + ++ + F GTS+LI+V D ++Q+ +++ +Y+
Sbjct: 376 TVWGAIYLTLVCLLPEFLIVQYNVPFY--FGGTSLLIVVVVMMDLMGQIQSHLLTHQYEG 433
Query: 489 I 489
+
Sbjct: 434 L 434
>gi|218885207|ref|YP_002434528.1| preprotein translocase subunit SecY [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756161|gb|ACL07060.1| preprotein translocase, SecY subunit [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 437
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 244/405 (60%), Gaps = 15/405 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA R+G+++P+ GV+ A QN+L D FSGGG+ L + +LGI+P+I+A
Sbjct: 26 LAAYRIGVHVPVPGVDSGALADFFASVQNTLFGLFDMFSGGGLRNLSVFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL ++P+L+ + K EG AGR+K+ QYTRYA+V ++Q G + L
Sbjct: 86 IIIQLLQVVSPELKRMAKEEGAAGRRKITQYTRYATVLITVIQGFGIAVGLENMHSPAGA 145
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V D + + ++ LT G+ ++GE+I++ +GNG SL+IF+ I++ +P ++
Sbjct: 146 PVVLDAGWGFRMITIATLTAGTVLIMWLGEQITEKGIGNGISLIIFSGIVAGIPGGIVKS 205
Query: 267 VAEAFQDGNY-IGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ + G+ + A ++++ + +VLG IV+++ +R+IPI+YA R R +S +L
Sbjct: 206 -GQLIKAGDMSVFTAILVLALMAVVLGCIVFMERGQRRIPIHYAKRQVGRKMFGGQSTHL 264
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P ++N++GV+P IF++S L P T+A F+ L++ A P Y I LI FF
Sbjct: 265 PLRINTAGVIPPIFASSLLLFPATIASFSANETLQRVAAWFAPHTVMYNILFISLIVFFC 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT + DP D++E LK+ G IP +RPG T ++ VL+R+++ G+++++ + P
Sbjct: 325 FFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTRQYIDRVLTRMTIWGAIYISAICVLPM 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ + F GTSVLILVG A D +V++ +IS++Y+ +
Sbjct: 385 ILIAQFNVPFY--FGGTSVLILVGVAMDFMSQVESHLISRQYEGL 427
>gi|94987419|ref|YP_595352.1| preprotein translocase subunit SecY [Lawsonia intracellularis
PHE/MN1-00]
gi|442556267|ref|YP_007366092.1| preprotein translocase subunit SecY [Lawsonia intracellularis N343]
gi|94731668|emb|CAJ55031.1| Preprotein translocase subunit SecY [Lawsonia intracellularis
PHE/MN1-00]
gi|441493714|gb|AGC50408.1| preprotein translocase subunit SecY [Lawsonia intracellularis N343]
Length = 435
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 239/412 (58%), Gaps = 13/412 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
K L +G L R+G++IP+ GV+ A + +L D FSGGG+ + + +LG
Sbjct: 17 KLLWTVGLLCAYRIGVHIPVPGVDGIALTHFFESVAGTLFGLFDMFSGGGLRNVSVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL I P + + K EG AGR K+ QYTRY +V ++Q IG + L
Sbjct: 77 IMPYISASIIMQLLQVIIPDFKRMAKEEGAAGRYKITQYTRYGTVIITLIQGIGIAIGLE 136
Query: 207 PYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ WV VT+LTL G+ ++GE+IS+ +GNG SL+IF+ I+
Sbjct: 137 SMYSPTNIPIVLEPGWVFRIVTVLTLTAGTVLIMWLGEQISEKGIGNGISLIIFSGIVVG 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRSGG 317
+P + +T I +A +++ F+ VL G+V+++ A+R+IPI YA R R
Sbjct: 197 IPGAIVKTYQLIILGDMNILIALVLMLFMFAVLTGVVFMERAQRRIPIQYAKRQLGRKVY 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
+S +LP +VN++GV+P IF++S L P T+A F LK AV +P Y +
Sbjct: 257 GGQSTHLPLRVNTAGVIPPIFASSLLLFPATMASFDISDWLKDIAVWFSPSTILYNCIFL 316
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+LI FF Y+YT + D D+SE LK+ G IP +RPG+ T +L VLSR+++ G V+++
Sbjct: 317 VLIFFFCYFYTAIIFDSKDISENLKKAGGFIPGIRPGEKTCEYLDGVLSRLTLWGGVYIS 376
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
I++ P ++ ++ + F GTS+LILVG A D ++++ IS++Y+ +
Sbjct: 377 IISILPMMLISQFNVPFY--FGGTSILILVGVAMDFMSQIESHFISKQYEGL 426
>gi|254303400|ref|ZP_04970758.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323592|gb|EDK88842.1| protein translocase SecY [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 426
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 245/395 (62%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGTGVCLWLQSVGLIYNPGLSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ +VT LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTVTTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + + GG+ +++Y+P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTSKGGMGQNSYIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|345891300|ref|ZP_08842150.1| preprotein translocase, SecY subunit [Desulfovibrio sp. 6_1_46AFAA]
gi|345048442|gb|EGW52277.1| preprotein translocase, SecY subunit [Desulfovibrio sp. 6_1_46AFAA]
Length = 429
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 251/414 (60%), Gaps = 19/414 (4%)
Query: 92 KLLGY----LALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSL 145
K LG+ L R+G+++P+ GV+ A + S L S D FSGGG+ + + +L
Sbjct: 9 KRLGWTFLILCCYRIGVHVPVPGVDAAALASFFESMSGTLFSLFDMFSGGGLRNVSVFAL 68
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G++P+I+A I+ QLL ++P ++ + K EG+AGR+K+ QYTRY +V +VQ +G + L
Sbjct: 69 GVMPYISASIIMQLLQVVSPDIKRMAKEEGQAGRRKITQYTRYLTVLITLVQGLGIAVGL 128
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
P V + + L ++ T GS ++GE+I++ +GNG SL+IF I+
Sbjct: 129 ENMTSPAGSPIVLNPGWHFRLVTMMTFTAGSVLVMWLGEQITERGIGNGISLIIFCGIVV 188
Query: 258 YLPASFGRTVAEAFQDGNY-IGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS 315
+P ++VA Q G+ I +A +I+ F+ V + IV+V+ A+R+IPI+YA R R
Sbjct: 189 GIPRGIIQSVA-LIQAGDMSIFMAVVIVVFMAAVTVCIVFVERAQRRIPISYAKRQVGRK 247
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
++++LP ++N++GV+P IF++S L P T+ +F+ +K+AA +P G Y
Sbjct: 248 MFGGQNSHLPLRLNTAGVIPPIFASSLLLFPATIGQFSTNEYVKRAAELFSPHGILYNII 307
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ L+ FF Y+YT + DP D+SE LK+ G IP +RPG+ T ++ TVLSR+++ G+V+
Sbjct: 308 YVALMFFFCYFYTAIIFDPKDMSENLKKAGGFIPGIRPGEKTQEYIDTVLSRLTLSGAVY 367
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ P ++ ++ + F GTS+LILVG A D +V++ +IS +Y+ +
Sbjct: 368 ISLVCLLPMLLISNFNVPFY--FGGTSLLILVGVAMDFMNQVESHMISSQYQGL 419
>gi|255020785|ref|ZP_05292843.1| Preprotein translocase secY subunit [Acidithiobacillus caldus ATCC
51756]
gi|340781366|ref|YP_004747973.1| preprotein translocase subunit SecY [Acidithiobacillus caldus SM-1]
gi|254969781|gb|EET27285.1| Preprotein translocase secY subunit [Acidithiobacillus caldus ATCC
51756]
gi|340555519|gb|AEK57273.1| Preprotein translocase secY subunit [Acidithiobacillus caldus SM-1]
Length = 443
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 251/419 (59%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L LLG L + R+G +IP+ G++ A +Q ++L + FSGG + RL +
Sbjct: 20 LRNRILFLLGALLVFRIGAHIPVPGIDPAAMAAFFNQQRGTILGMFNMFSGGALSRLTVF 79
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+FQL + PK+++L K+EGEAGR+K+++YTRYA+V +++Q +G +
Sbjct: 80 ALGIMPYISASIIFQLAGSVVPKIEEL-KKEGEAGRRKIMEYTRYATVVLSLLQGLGIAV 138
Query: 204 YLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
+ P V D ++ T+ L G+ F +IGE+I++ +GNG S++IF I+
Sbjct: 139 AIEKMHAGNLPVVIDPGIGFLFTTTISLAAGTVFLMWIGEQITERGIGNGISMIIFAGIV 198
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILL-VLG-IVYVQEAERKIPINYASRYTSR 314
+ LP + G T E + G Y L +++ + L VL +V+++ A+R+IPI YA R R
Sbjct: 199 AGLPEAIGTTF-ELMRTGQYQPLFVLMLFILALAVLAFVVFMESAQRRIPIQYAKRQVGR 257
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGGS 370
+S ++P KVN SGV+P IF++S + LP TL A G+ L + AL+PG +
Sbjct: 258 KIYGGQSTHMPLKVNMSGVIPPIFASSIILLPATLSGWFANVPGMEWLARFGQALSPGST 317
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ + I FF ++YT + +P + ++ LK+ GA +P +RPG+ TA ++ VLSR+++
Sbjct: 318 LYVVVFTVAIVFFAFFYTAMVFNPRETADNLKKSGAFVPGIRPGEQTAKYMDRVLSRLTL 377
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+++L ++ P + H F GTS+LI+V D ++Q+ +++ +Y+ +
Sbjct: 378 WGAIYLTLVCLLPEFL--IVHYNVPFYFGGTSLLIVVVVMMDLMAQIQSHLLTHQYEGL 434
>gi|83591256|ref|YP_431265.1| preprotein translocase subunit SecY [Moorella thermoacetica ATCC
39073]
gi|83574170|gb|ABC20722.1| protein translocase subunit secY/sec61 alpha [Moorella
thermoacetica ATCC 39073]
Length = 420
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 243/408 (59%), Gaps = 20/408 (4%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
F LL ++ RLG ++P+ G+N + ++ D SGG R I ++GI+P
Sbjct: 19 FFTLLMFVVF-RLGAHVPVPGINNAILKELIGTGTIFGFFDVISGGAFKRFTIFAMGIMP 77
Query: 150 FINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL---- 205
+INA I+ QLL + P L+ L K + E GRKK++QYTRY +V +I+QA+G LYL
Sbjct: 78 YINASIIMQLLTVVIPALERLAKEDIE-GRKKIVQYTRYGTVILSILQALGMGLYLARSH 136
Query: 206 ---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
RP + ++ L V +LT G+ F ++GE+I++ +GNG SL+IF I+S LPA
Sbjct: 137 AFLRPGLYNY-----LVVVIMLTAGTTFLMWMGEQITEKGIGNGISLIIFAGIVSRLPAG 191
Query: 263 FGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
++ + G N I L I +L++ +V VQE ER+I + YA R R +
Sbjct: 192 -AASLYQYVTSGTVNIISLLVFAIVAVLIIAAVVAVQEGERRIAVQYAKRVVGRRVYGGQ 250
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL-NPGGSFYLPTNILL 379
S ++P KVN +GV+P+IF+ S L P TLA + ++L + V +P +FY+ LL
Sbjct: 251 STHIPLKVNQAGVIPVIFAMSILLFPSTLASWFPQSSLAQTIVRFFDPRSAFYMILYALL 310
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF Y+YT + +P DV++ +K+ G IP +RPG+ TA +++ +L+R+++ G++FLA +
Sbjct: 311 IIFFTYFYTAVTFNPQDVADNMKKYGGFIPGLRPGRPTAEYIERILARVTLAGAIFLAFI 370
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P ++ T + + F GTS+LI+VG A +T +++++ ++ + Y+
Sbjct: 371 AVLPNLLMAITGINVY--FGGTSLLIVVGVALETMKQLESHLLLRHYQ 416
>gi|282857343|ref|ZP_06266580.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
gi|282584843|gb|EFB90174.1| preprotein translocase, SecY subunit [Pyramidobacter piscolens
W5455]
Length = 428
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 250/424 (58%), Gaps = 14/424 (3%)
Query: 71 MEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTL 129
M D+ F D FK P L + L LG L + RLG +IP G+N A + + +L L
Sbjct: 1 MADT---FRDVFKLPDLKRRILFTLGMLFVFRLGAHIPTPGINSAAMSQLFEGSGVLGFL 57
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
D F+GG + R + SLG+ P+INA IV QL A I P L+ LQK EG G+KK+ QYTRY
Sbjct: 58 DLFAGGALRRFSLFSLGVAPYINASIVLQLAAVIFPALERLQK-EGPQGQKKMTQYTRYG 116
Query: 190 SVGFAIVQAIGQVLYLRP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
++ FA VQAIG ++LR + D+ + +T +T GS ++GE ++D +GNG
Sbjct: 117 AIFFAFVQAIGMAMWLRRAGVLAASGLDFFVAVITAVT-GSVAVMWLGEEMTDHGIGNGI 175
Query: 248 SLLIFTSIISYLPASFGRTVAE-AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
SLLIF I++ LP + +T + + + N + L + + ++ G V +++ +R++P+
Sbjct: 176 SLLIFAGIVARLPEAVIQTFSMISSGEMNVVTLILALAVMVAVLAGAVLLEQGQRRLPVQ 235
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVAL 365
YA R +S+++P +VN GVMPIIF++S L P T+ R F G ++ A
Sbjct: 236 YAKRVVGNRVYGGQSSFIPLRVNMGGVMPIIFASSLLIFPSTVLRLFHGT---ERLANYF 292
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PG Y ++LI FF ++YT + +P D+++ +K+ G I +RPGK T+ +++ +
Sbjct: 293 APGSWLYTVLYVVLIVFFGFFYTAMVFNPSDIADNMKKNGGFILGIRPGKPTSDYIEKIA 352
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
SRI+++GSVFL ++A P ++ +T+F F GTSVLI+VG A + +V ++++ +
Sbjct: 353 SRITLVGSVFLVVVALVPDLLTNVFGITSFY-FGGTSVLIIVGVALEIVEQVNSQLLMRN 411
Query: 486 YKNI 489
Y+ +
Sbjct: 412 YEGV 415
>gi|303328074|ref|ZP_07358513.1| preprotein translocase, SecY subunit [Desulfovibrio sp. 3_1_syn3]
gi|302861900|gb|EFL84835.1| preprotein translocase, SecY subunit [Desulfovibrio sp. 3_1_syn3]
Length = 437
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 251/414 (60%), Gaps = 19/414 (4%)
Query: 92 KLLGY----LALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSL 145
K LG+ L R+G+++P+ GV+ A + S L S D FSGGG+ + + +L
Sbjct: 17 KRLGWTFLILCCYRIGVHVPVPGVDAAALASFFESMSGTLFSLFDMFSGGGLRNVSVFAL 76
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G++P+I+A I+ QLL ++P ++ + K EG+AGR+K+ QYTRY +V +VQ +G + L
Sbjct: 77 GVMPYISASIIMQLLQVVSPDIKRMAKEEGQAGRRKITQYTRYLTVLITLVQGLGIAVGL 136
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
P V + + L ++ T GS ++GE+I++ +GNG SL+IF I+
Sbjct: 137 ENMTSPAGSPIVLNPGWHFRLVTMMTFTAGSVLVMWLGEQITERGIGNGISLIIFCGIVV 196
Query: 258 YLPASFGRTVAEAFQDGNY-IGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS 315
+P ++VA Q G+ I +A +I+ F+ V + IV+V+ A+R+IPI+YA R R
Sbjct: 197 GIPRGIIQSVA-LIQAGDMSIFMAVVIVVFMAAVTVCIVFVERAQRRIPISYAKRQVGRK 255
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
++++LP ++N++GV+P IF++S L P T+ +F+ +K+AA +P G Y
Sbjct: 256 MFGGQNSHLPLRLNTAGVIPPIFASSLLLFPATIGQFSTNEYVKRAAELFSPHGILYNII 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ L+ FF Y+YT + DP D+SE LK+ G IP +RPG+ T ++ TVLSR+++ G+V+
Sbjct: 316 YVALMFFFCYFYTAIIFDPKDMSENLKKAGGFIPGIRPGEKTQEYIDTVLSRLTLSGAVY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ P ++ ++ + F GTS+LILVG A D +V++ +IS +Y+ +
Sbjct: 376 ISLVCLLPMLLISNFNVPFY--FGGTSLLILVGVAMDFMNQVESHMISSQYQGL 427
>gi|357635337|ref|ZP_09133215.1| preprotein translocase, SecY subunit [Desulfovibrio sp. FW1012B]
gi|357583891|gb|EHJ49224.1| preprotein translocase, SecY subunit [Desulfovibrio sp. FW1012B]
Length = 437
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 244/405 (60%), Gaps = 15/405 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
+A+ R+G+++P+ GV+ A + +N+L D FSGGG+ L I +LGI+P+I+A
Sbjct: 26 VAVYRIGVHVPVPGVDSAALADFFESAKNTLFGLFDMFSGGGLRNLSIFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND--- 211
I+ QLL ++P+L +QK EG AGRKK+ QYTRY +V A++Q G + L +
Sbjct: 86 IIIQLLTVVSPELAKMQKEEGAAGRKKITQYTRYGTVLIAVIQGFGIAVGLESMASPTGA 145
Query: 212 ---FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
+ W +T++TL G+ F ++GE++++ +GNG S++I+ I++ LP + T
Sbjct: 146 PVVLMSGWAFRLMTIITLAAGTVFLMWLGEQMTEKGIGNGISMIIYAGIVAGLPRAVLST 205
Query: 267 VAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ + + G ++I +++ + IV+++ +R+IPI YA R R ++ +L
Sbjct: 206 I-DLVKAGELSLFVLLLIGALMIGVLYAIVFMERGQRRIPIQYAKRMVGRKMYGGQTTHL 264
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P +VN++GV+P IF++S L P TL F+ + LK A +P Y + LI FF
Sbjct: 265 PLRVNTAGVIPPIFASSILLFPATLGEFSHVPWLKSVASFFSPQTMTYNVVFVALIVFFC 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + DP D++E +++QG IP +RPG T ++ VL+RI++ GS++++++ P
Sbjct: 325 YFYTAIIFDPADIAENIRKQGGFIPGIRPGAKTKEYIDKVLARITLWGSLYISVVCVLPM 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
V+ Q ++ + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 385 VLIQQFNVPFY--FGGTSLLIVVGVAMDFMSQIESYLISRQYEGL 427
>gi|406899949|gb|EKD43079.1| hypothetical protein ACD_72C00468G0005 [uncultured bacterium]
Length = 424
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 239/409 (58%), Gaps = 13/409 (3%)
Query: 91 LKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L ++ L + RL ++P+ GVN L N +L L+ FSGG + + LG+ P+
Sbjct: 19 LFVVAMLVIFRLASHVPVPGVNVANLRDYLAGNQILGLLNVFSGGTMSNFSVIMLGVAPY 78
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL----R 206
I A I+FQLLA I P L++L K EGE+G++K+ YTRY +V A +Q+ + L R
Sbjct: 79 ITASIIFQLLAMIVPSLEELSK-EGESGQQKLSMYTRYLTVPLAFLQSFAMIRLLNNSPR 137
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P + D +T ++T + +T G+ F ++GE IS+ K+GNG SLLIF I++ LP++ RT
Sbjct: 138 PILADLTTFRMVTIMFTITAGTMFLVWLGELISEKKVGNGMSLLIFAGIVAALPSTL-RT 196
Query: 267 VAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
+ + + + +L V+G+V++ E +R IP+NYA + + S++LP
Sbjct: 197 AFVNYSSADLYTFVMMTVVALLTVVGVVFISEGQRNIPVNYAKQMRGNNAFGGGSSHLPI 256
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARF------TGIAALKKAAVALNPGGSFYLPTNILLI 380
+VN SGV+PIIF+ S + P +A+F +A L + ++Y +L+
Sbjct: 257 RVNMSGVIPIIFAVSLVLFPPMVAQFFVQARSAWLANLATKTITFFNDQTYYGIMYFVLV 316
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF Y+YT + +P VSE L+RQG +P +RPGK T +L +++RI+++G++FL I+A
Sbjct: 317 FFFTYFYTAVVFNPQKVSENLQRQGGFVPGIRPGKETEKYLGMIVNRINLIGALFLGIIA 376
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +++ + TAF+ GTS+LI+V A +T ++V+A++ Y I
Sbjct: 377 VLPLLVQGASGSTAFQ-IGGTSLLIVVAVAIETTKQVEAQVTMHNYDRI 424
>gi|317489910|ref|ZP_07948402.1| preprotein translocase [Eggerthella sp. 1_3_56FAA]
gi|316910908|gb|EFV32525.1| preprotein translocase [Eggerthella sp. 1_3_56FAA]
Length = 426
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 246/420 (58%), Gaps = 16/420 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGI 137
D FK P L K L L LAL R G Y+P+ G+ F + D ++ LD F+GG +
Sbjct: 7 DAFKVPELRKKILFTLAILALYRFGAYVPVPGIPFNEFANSFQDSGVSMTMLDLFTGGAL 66
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TRY ++G ++
Sbjct: 67 SNFSVFSLGIMPYITASIIMQLMQGVIPAIGRWAK-EGETGRRKITQITRYLTLGLGLIN 125
Query: 198 AIGQVLYLRP--YVNDFSTDW--VLTSVTL---LTLGSAFTTYIGERISDLKLGNGTSLL 250
AIG +L + Y FST+ +LT + + L G+AF ++GE I+ +GNG SL+
Sbjct: 126 AIGYLLLFKSPQYGVVFSTEVPEILTDILVVFTLVAGTAFIMWMGELITQRGIGNGMSLI 185
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL---VLGIVYVQEAERKIPINY 307
IF SI+S +P++ ++ +G+A +++ +++ + I++V+ A+R+IP+NY
Sbjct: 186 IFVSIVSRVPSAIFSSMN--LTADTTMGVAITVVTLLVVLACIPAIIFVERAQRRIPVNY 243
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R R +S Y+P KVN++GV+PIIF++ + P LA + L A A++
Sbjct: 244 AKRVQGRKMMGGQSTYIPLKVNAAGVIPIIFASCLIYFPAQLAALFNVGWLTAVADAIST 303
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G ++ T +LLI FF Y+YT + +P++ ++ L++QG IP VRPG +T ++K VL R
Sbjct: 304 GWVNWILT-VLLIVFFAYFYTSMVFNPEETADNLRKQGGFIPGVRPGTATVTYIKNVLHR 362
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ G +F+A +A P +I T T + F GT +LI++G A DT KV++++ Y+
Sbjct: 363 VTLPGGIFIAAIAVVPTIIFYFTGNTLIQAFGGTPILIMIGVALDTMNKVESQLKMHNYE 422
>gi|257784943|ref|YP_003180160.1| preprotein translocase subunit SecY [Atopobium parvulum DSM 20469]
gi|257473450|gb|ACV51569.1| preprotein translocase, SecY subunit [Atopobium parvulum DSM 20469]
Length = 426
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 245/400 (61%), Gaps = 19/400 (4%)
Query: 101 RLGIYIPLGGVNRE----AFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R G Y+P+ G + A+ L +N ++ L+ FSGG + R+ + SLGI+P+I AQI+
Sbjct: 29 RFGAYLPVPGAPFQQMLSAYQNGLAKNGAMAVLNLFSGGALSRMSVFSLGIMPYITAQII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST-- 214
FQ++ + P L +L K +GE+G++K+ QYTR +VG A++ AIG + + Y F++
Sbjct: 89 FQMMQSVIPSLGELAK-DGESGQRKITQYTRNLTVGLALLNAIGYLFLFKSYGVSFASME 147
Query: 215 ------DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ L T+L +G+ ++GE I+ +GNG SL+IF +I++ LP + ++
Sbjct: 148 GVPEALENFLVVFTML-VGAIIIMWLGEVITQQGVGNGMSLIIFANIMAGLPTAL---IS 203
Query: 269 EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 328
GN + ++ + ++ IVY++ +R+IPINYA R R +S YLP KV
Sbjct: 204 SVTTRGNIVLTVVTVVVMLAIIPLIVYIERGQRRIPINYAKRVVGRRMMGGQSTYLPIKV 263
Query: 329 NSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYY 387
N++GV+PIIF+++ L LP +A F G+ ++K A +L+ G ++ +++ I FF Y+Y
Sbjct: 264 NTAGVVPIIFASAILYLPAQVAVFFPGVEWMQKFATSLSSGWVNWV-LSVIFIVFFAYFY 322
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T + +P++ ++QLK+QG IP VRPG +T+ ++KTV+ R+++ G++F+A+LA P +I
Sbjct: 323 TSMVFNPEETADQLKKQGGFIPGVRPGTATSTYIKTVIDRVTLPGAIFMAVLAIVPTIIF 382
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T + + F GTSVLI+VG A DT +++ + Y+
Sbjct: 383 WFTGDSLIQAFGGTSVLIMVGVAMDTLSSIESHLKMHNYE 422
>gi|426404867|ref|YP_007023838.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425861535|gb|AFY02571.1| preprotein translocase subunit SecY [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 442
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 252/421 (59%), Gaps = 31/421 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L L LA+ R+G+++P GV+ A + S + ++F+GG + + I +LG
Sbjct: 16 RILFTLALLAIYRIGVHVPTPGVDGSAVLSFFQAQSRGIFGLFNTFTGGALSQFSIFALG 75
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I++ I+FQLL P L+ L K+EGE GR+K+ QYTRYA+V AI+Q G +L
Sbjct: 76 IMPYISSSIIFQLLTSAIPYLEAL-KKEGEQGRRKINQYTRYATVALAIIQGYGISTWL- 133
Query: 207 PYVNDFSTD--------------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+N S D + + ++ LT G+ F ++GE+I++ +GNGTSL+IF
Sbjct: 134 --MNSTSPDGHPLVIAPTVAFLPFQIMTIITLTAGTCFIMWLGEQITERGIGNGTSLIIF 191
Query: 253 TSIISYLPASFGRTVAEAFQDGNY-IGLATIIISFILLVLG-IVYVQEAERKIPINYASR 310
T I + +P + + E + G L ++++F++ ++ ++Y++ A+R+I + Y+ R
Sbjct: 192 TGIAAAIPGGV-QQLWELVRTGEMRFALVLLLVAFMVAIIAAVIYMEVAQRRITVQYSQR 250
Query: 311 YTSRSGGLQR----SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
GG+Q +++LP K+N SGV+P IF++S L P T+A+F LK +LN
Sbjct: 251 --QGGGGMQSMQTPTSHLPIKLNISGVIPPIFASSLLMFPATMAQFVNTPWLKALQDSLN 308
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P G+ + + LI FF+++YT + +P+DV++ LK+ G +P VR GKSTA +++ VL
Sbjct: 309 PSGTIFNIMFVALIVFFSFFYTEIVFNPNDVADNLKKYGGFVPGVRAGKSTADYIQRVLE 368
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++V+G ++L + P ++ F GTS+LILVG A DTA+++Q+ +I+QKY
Sbjct: 369 RVNVVGCIYLCTICILPGIM--VNQFNVPFHFGGTSLLILVGVALDTAQQIQSHMITQKY 426
Query: 487 K 487
+
Sbjct: 427 E 427
>gi|254516931|ref|ZP_05128989.1| preprotein translocase, SecY subunit [gamma proteobacterium NOR5-3]
gi|219674436|gb|EED30804.1| preprotein translocase, SecY subunit [gamma proteobacterium NOR5-3]
Length = 440
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 262/413 (63%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGV--NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+ N+ A + N +Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 30 RIGTHIPVPGIDPNQLAALFNQNQGTILGLANMFSGGALERMSILALGIMPYISASIIMQ 89
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L++ + P+L+ L K+EGE+GR+K+ QYTRY +V AIVQA G + + +++ +
Sbjct: 90 LMSAVTPQLEQL-KKEGESGRRKISQYTRYLTVVLAIVQATGMTVGMANQGMSYNSGLLF 148
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ ++T L G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+++ +A Q + N
Sbjct: 149 FIIAITSLVTGAVFMMWLGEQITEKGVGNGISLLIFAGIVAGLPSAIGQSLEQARQGEIN 208
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L I+ I ++ IV+++ +R+I +NYA R R +S++LP KVN +GV+P
Sbjct: 209 ILALLLILSLAIAVIYMIVFIERGQRRITVNYAKRQQGRKMYQAQSSHLPLKVNMAGVIP 268
Query: 336 IIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P ++A++ G + L+ AVA+ PG P NILL I FF ++Y
Sbjct: 269 AIFASSILLFPASIAQWFGQSGGADWLQDLAVAIGPGQ----PLNILLFTIFIVFFCFFY 324
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P +V++ LK+ GA +P +RPG+ TA ++ VL+R++V GS ++A++ P +
Sbjct: 325 TALMFNPQEVADNLKKSGAFVPGIRPGQQTANYIDGVLTRLTVFGSAYIALVCLLPQFLV 384
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
T ++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ +YGS
Sbjct: 385 VTWNVPFYLG--GTSLLIVVVVVMDFMAQVQSHMMSHQYDSVMKKANLKNYGS 435
>gi|189424430|ref|YP_001951607.1| preprotein translocase subunit SecY [Geobacter lovleyi SZ]
gi|189420689|gb|ACD95087.1| preprotein translocase, SecY subunit [Geobacter lovleyi SZ]
Length = 437
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 248/423 (58%), Gaps = 15/423 (3%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + F+ P L + L LG LA+ R+G +IP G++ A Q +LL D FSG
Sbjct: 5 FQNIFRIPELKKRVLFTLGMLAVYRVGCHIPTPGIDSIALSHFFKQAQGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + R+ + +LGI+P+I++ I+FQLL + P ++ L K EGEAGRKK+ QYTRY ++ +
Sbjct: 65 GALERMSVFALGIMPYISSSIIFQLLTVVVPAIEKLSK-EGEAGRKKITQYTRYGTILLS 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQ G + L V + L ++ LT G+AF ++GE++++ +GNG
Sbjct: 124 VVQGSGIAIGLESMRGPAGELVVPTPGWSFRLMTIITLTAGTAFIMWLGEQMTERGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIP 304
SL+IF I+ +P++ T + GN A I + ++ ++ IV+V+ +R++P
Sbjct: 184 ISLIIFAGIVVRIPSAIANT-GKLINSGNLSLFALIFVLALMAAVIAAIVFVERGQRRLP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R T ++++LP KVN +GV+P IF++S + P T+A F + A+++ A
Sbjct: 243 IHYAKRVTGLKTFSPQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINVPAVQQFAKM 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV+E +K+ G IP +RPGK T+ ++ ++
Sbjct: 303 LTPGNWLYNVFYVAFIVFFCYFYTAVTFNPADVAENIKKHGGYIPGIRPGKETSEYMDSI 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+R++ G+++++++ P+++ L F GTS+LI VG DT ++++ +I++
Sbjct: 363 LTRLTFAGAIYISLVCVLPSLLVGGFKLNLPFYFGGTSLLIAVGVGMDTVAQIESHLITR 422
Query: 485 KYK 487
Y+
Sbjct: 423 NYE 425
>gi|422338811|ref|ZP_16419771.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355371938|gb|EHG19281.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 426
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 245/395 (62%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGTGVCLWLQSVGLIYNPGLSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ +VT LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTVTTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + + GG+ +++Y+P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTSKGGMGQNSYIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGLFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|134298113|ref|YP_001111609.1| preprotein translocase subunit SecY [Desulfotomaculum reducens
MI-1]
gi|134050813|gb|ABO48784.1| protein translocase subunit secY/sec61 alpha [Desulfotomaculum
reducens MI-1]
Length = 419
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 238/405 (58%), Gaps = 6/405 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L L L R+G +IP+ G+N EAF L + LL D SGG I ++
Sbjct: 14 LRSKLLFTLAMLFLFRVGAHIPVPGINPEAFANLLTKGQLLGFFDVISGGAFKNASIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ QYTRY + A VQAIG + L
Sbjct: 74 SITPYINASIIMQLLTVVIPHLEKLAK-EGEEGRKKITQYTRYFTAVLAFVQAIGMTMAL 132
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ + + S LT T G+ +IGE+I++ +GNG SLLIFT I+S +P++
Sbjct: 133 KGALVNPSVLNYLTVAITFTAGTVLLMWIGEQITEKGIGNGISLLIFTGIVSRIPSAM-V 191
Query: 266 TVAEAFQDGNYIGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+ + + G L+ +++ I L++ ++YVQE +R+IP+ YA R R ++++
Sbjct: 192 NIGQYLKAGTINILSILVLLIIGTLVIAAVIYVQEGQRRIPVQYAKRVVGRRVYGGQTSH 251
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
LP KVN +GV+PIIF++S L PG +A F G A GG LLI
Sbjct: 252 LPLKVNQAGVIPIIFASSLLMFPGQIASWFHGNAVADWYLRWFAWGGVLNSVLYALLIVG 311
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F Y+YT + ++P D++E +K+ G IP +RPG+STA ++ V+SRI++ G+VFLA++A
Sbjct: 312 FTYFYTAVIMNPVDMAENIKKYGGFIPGLRPGRSTAEYIGKVMSRITLAGAVFLALIAIL 371
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P VI T + F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 372 PNVILALTRIPNVY-FGGTALLIVVGVALDTMKQIESHLLMRSYQ 415
>gi|237743919|ref|ZP_04574400.1| protein translocase subunit secY [Fusobacterium sp. 7_1]
gi|422933510|ref|ZP_16966430.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|229432950|gb|EEO43162.1| protein translocase subunit secY [Fusobacterium sp. 7_1]
gi|339891551|gb|EGQ80512.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 426
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGEAGR ++ Q+TRY ++ A++Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGEAGRNRITQWTRYLTIALAVIQGTGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LVPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALIF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|108804954|ref|YP_644891.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
gi|108766197|gb|ABG05079.1| protein translocase subunit secY/sec61 alpha [Rubrobacter
xylanophilus DSM 9941]
Length = 428
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 234/401 (58%), Gaps = 15/401 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFV-GNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQI 155
LA R G ++PL G+NRE G LDQN++ F+GG L + +LGI+P+I A I
Sbjct: 25 LAAYRAGAFVPLPGINREVLAAGGLDQNAITGLFGVFTGGAFNNLSVFALGIMPYITAAI 84
Query: 156 VFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-----PYVN 210
V QL+ P+LQ+L REGE G++K+ QYTR ++ + +Q++ VL+LR P +
Sbjct: 85 VMQLMTVAIPRLQEL-AREGEVGQQKITQYTRVFTLALSFIQSVAMVLFLRSGQFGPVLA 143
Query: 211 DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
+ V LT G T + GE I+ LGNG SL+I SI+S P + RT+ E
Sbjct: 144 GAGALDLFLVVVTLTTGVMVTMWFGELITQRGLGNGISLIITASILSQAPNAV-RTLIE- 201
Query: 271 FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNS 330
DG+ + + + I +++V IV+V E +R+IPI YA R R + YLP KVN
Sbjct: 202 --DGSVLTMVILGIIAVMIVAAIVFVNEGQRRIPITYAKRQVGRRMSQGGTTYLPLKVNM 259
Query: 331 SGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYY 386
+GV+PIIF++S L P + +F + L + A P + YL LLI F Y+
Sbjct: 260 AGVIPIIFASSLLIFPVVITQFAAGGDQSSWLFRLAQIFAPPSAPYLILYALLIVMFTYF 319
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
YT +Q +P + ++ LK+ G IP +RPG+ TA +L +VL+RI++ G+VFLA++A P +I
Sbjct: 320 YTAVQFNPIEHADNLKKSGGYIPGIRPGQPTALYLNSVLTRITLFGAVFLAVIAVLPYLI 379
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+L GTS+LI+VG + DT R+++++++ + Y+
Sbjct: 380 TGALNLPNSIYLGGTSMLIVVGVSLDTVRQLESQLMMRNYE 420
>gi|167629487|ref|YP_001679986.1| preprotein translocase subunit SecY [Heliobacterium modesticaldum
Ice1]
gi|167592227|gb|ABZ83975.1| preprotein translocase, secy subunit [Heliobacterium modesticaldum
Ice1]
Length = 422
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 231/390 (59%), Gaps = 6/390 (1%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G +IP+ G+NRE L+ +L D SGG + ++ I P+INA I+ QLL
Sbjct: 32 RIGAHIPVPGINREVIEQLLNSGALFGFFDVISGGSFRNFSVFAMSITPYINASIIMQLL 91
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ P L+ L K EGE GRKK+ +YTRY ++ A +QAIG L+ V + S L
Sbjct: 92 TVVIPSLEQLAK-EGEEGRKKITEYTRYFTILLAFIQAIGLSYGLKGAVANPSFAQYLLV 150
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIG 278
T LT G+ F +IGERI++ +GNG SL+IF I+S LPA T+ E + G N +
Sbjct: 151 ATTLTAGTVFLMWIGERITEKGIGNGISLIIFAGIVSRLPAGIA-TLYEYVRVGTTNVLN 209
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
+ +I + GI+Y+ E +R+IP+NYA R R +S ++P KVN +GV+P+IF
Sbjct: 210 VLLFLIIAGATIAGIIYISEGQRRIPVNYAKRVVGRRVYGGQSTHIPLKVNQAGVIPVIF 269
Query: 339 STSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDV 397
++S LALP T+A F G + N G + LLI FF Y+YT + +P DV
Sbjct: 270 ASSILALPTTIAAFFPGSPVGQWFQQYFNFGSFLHSAFYALLILFFTYFYTAITFNPVDV 329
Query: 398 SEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG 457
++ +K+ G IP +RPGK TA ++ V+SRI+++G++FLA+++ P + T +T
Sbjct: 330 ADNMKKYGGFIPGLRPGKPTADYITRVMSRITLVGALFLAVISLLPTFVIMLTGITNIY- 388
Query: 458 FAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI VG A DT +++++ ++ + Y+
Sbjct: 389 FGGTALLICVGVALDTMKQLESNMLMRHYQ 418
>gi|260495183|ref|ZP_05815311.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_33]
gi|289765432|ref|ZP_06524810.1| protein translocase subunit secY [Fusobacterium sp. D11]
gi|336400140|ref|ZP_08580928.1| preprotein translocase, SecY subunit [Fusobacterium sp. 21_1A]
gi|336419067|ref|ZP_08599334.1| preprotein translocase, SecY subunit [Fusobacterium sp. 11_3_2]
gi|423138117|ref|ZP_17125760.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. animalis F0419]
gi|260197240|gb|EEW94759.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_33]
gi|289716987|gb|EFD80999.1| protein translocase subunit secY [Fusobacterium sp. D11]
gi|336163337|gb|EGN66269.1| preprotein translocase, SecY subunit [Fusobacterium sp. 21_1A]
gi|336164072|gb|EGN66984.1| preprotein translocase, SecY subunit [Fusobacterium sp. 11_3_2]
gi|371958679|gb|EHO76388.1| preprotein translocase, SecY subunit [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 426
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGEAGR ++ Q+TRY ++ A++Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGEAGRNRITQWTRYLTIALAVIQGTGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALIF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|237742652|ref|ZP_04573133.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
gi|229430300|gb|EEO40512.1| protein translocase subunit secY [Fusobacterium sp. 4_1_13]
Length = 426
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGTGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGMGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|19704945|ref|NP_602440.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329200|ref|ZP_06871701.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19712847|gb|AAL93739.1| Protein translocase subunit secY [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153556|gb|EFG94373.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 426
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGTGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|421145997|ref|ZP_15605801.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487605|gb|EJG08556.1| preprotein translocase subunit SecY [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 426
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGAGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGMGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|256846047|ref|ZP_05551505.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294784822|ref|ZP_06750110.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
gi|256719606|gb|EEU33161.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_36A2]
gi|294486536|gb|EFG33898.1| preprotein translocase, SecY subunit [Fusobacterium sp. 3_1_27]
Length = 426
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ A++Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAVIQGTGVCLWLQSVGLIYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGMGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E LK+ G +IP +RPG+ T +L+ V SRI+ G +FLAI++ P VI + L
Sbjct: 331 DPEKVAENLKQGGGTIPGIRPGEETVEYLEGVASRITWGGGIFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|223042529|ref|ZP_03612578.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|314934277|ref|ZP_07841636.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|417906297|ref|ZP_12550088.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
gi|222444192|gb|EEE50288.1| preprotein translocase, SecY subunit [Staphylococcus capitis SK14]
gi|313652207|gb|EFS15970.1| preprotein translocase, SecY subunit [Staphylococcus caprae C87]
gi|341598167|gb|EGS40684.1| preprotein translocase, SecY subunit [Staphylococcus capitis
VCU116]
Length = 430
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 246/408 (60%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-- 208
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 80 TASIVMQLLQMDIVPKFSEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLG 138
Query: 209 ---VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS--- 262
+ D S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S
Sbjct: 139 GKLIMDKSIMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSIEQ 198
Query: 263 FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
FG+++ D + ++ +A +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FGQSLFVGQDDTSLAWLKIAGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSTQRLGTQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + I+L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIVYIVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA++
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P V + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIVATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|409398051|ref|ZP_11248903.1| preprotein translocase subunit SecY [Pseudomonas sp. Chol1]
gi|409117557|gb|EKM93985.1| preprotein translocase subunit SecY [Pseudomonas sp. Chol1]
Length = 442
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 253/413 (61%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS+D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAVGMSVGLAGQGVAFSSDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVAGAMFMMWLGEQITERGIGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G ++ L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSENMSWLADLSQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VLSR+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLSRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ SYGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKSYGS 438
>gi|288574682|ref|ZP_06393039.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570423|gb|EFC91980.1| preprotein translocase, SecY subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 410
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 240/401 (59%), Gaps = 10/401 (2%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
+G L + RLG +IP G++ A + +L LD F+GG + R I +LG+ P+INA
Sbjct: 1 MGMLFVFRLGAHIPTPGIDSAAMAHLFEGGGVLGFLDMFAGGALRRFSIFALGVAPYINA 60
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFS 213
IV QLL + P L+ +QK EG G+KK++Q TR +++GFA +QA+G V +L+ V FS
Sbjct: 61 SIVMQLLVVVFPALEKMQK-EGPEGQKKIIQITRLSTLGFAAIQAVGMVFWLQ-RVGVFS 118
Query: 214 TD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF 271
++T++ + G+ ++GE ISD +GNG SLLIF I++ +P + RT
Sbjct: 119 GGALGMVTAILTIIAGAIAVMWLGEEISDHGIGNGISLLIFAGIVARIPEATIRT-WNML 177
Query: 272 QDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVN 329
G L ++ + I++V G + +QE +R++P+ YA + +S ++P KVN
Sbjct: 178 HLGELHALIVLLALMVMIVVVAGCIVLQEGQRRLPVQYAKKVVGNKVYGGQSTFIPLKVN 237
Query: 330 SSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
GVMPIIF++S L P T+ + F+G A+K + L PG Y + LI FF Y+YT
Sbjct: 238 QGGVMPIIFASSILIFPYTVLKFFSGDIAIKMQNM-LAPGSWLYSVLYVTLILFFAYFYT 296
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
+ +P DV+ +K+ G I +RPGK T+ +++ V+SRI++ G++FLA++A P V+
Sbjct: 297 AMVFNPSDVANNMKKYGGFILGIRPGKPTSDYIEKVMSRITLGGALFLAVIALIPTVMTN 356
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+T+F F GT+VLI+VG A D +V+ +++ + Y+ I
Sbjct: 357 LMGITSFY-FGGTAVLIVVGVALDLVHQVEGQLLMRHYEGI 396
>gi|222056685|ref|YP_002539047.1| preprotein translocase subunit SecY [Geobacter daltonii FRC-32]
gi|221565974|gb|ACM21946.1| preprotein translocase, SecY subunit [Geobacter daltonii FRC-32]
Length = 435
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 254/426 (59%), Gaps = 23/426 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + FK P L + L L LA+ R+G +IP G++ +A Q +LL D FSG
Sbjct: 5 FQNIFKIPELKKRVLFSLAMLAVYRVGCHIPTPGIDSQALAHFFKQAQGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EGEAGRKK++QYTRY ++ +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPAIEKLSK-EGEAGRKKIIQYTRYGTIVLS 123
Query: 195 IVQAIGQVLYL---RPYVNDF---STDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNG 246
+VQA+G + L R + S W +T++TL G+AF ++GE++S+ +GNG
Sbjct: 124 VVQALGISIGLESMRGPAGELVVPSPGWGFRIMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQ--DGNYIGLATIIISFILLVLGI---VYVQEAER 301
SL+IF I++ +P + + +F+ I L II L+ L I V+V+ +R
Sbjct: 184 ISLIIFAGIVARIPTA----ILNSFRLLKTGEIPLFAIIFVLALMFLAIAAVVFVERGQR 239
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
++PI+YA R ++++LP KVN +GV+P IF++S + P T+ F I ++KA
Sbjct: 240 RLPIHYAKRVVGLKTYGTQTSHLPLKVNMAGVIPPIFASSIIMFPATVGNFINIPWVQKA 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ +L PG Y + I FF Y+YT + +P DV+E +K+QG IP +RPGK T+ FL
Sbjct: 300 SKSLTPGNWVYNLFYVAFIVFFCYFYTAVTFNPVDVAENVKKQGGYIPGIRPGKETSEFL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VL++++ G+++++ + P+++ +L + F GT++LI VG DT ++++ +
Sbjct: 360 DRVLTKLTFAGAIYISAVCVLPSILIGKFNLPFY--FGGTALLIAVGVGMDTVAQIESHL 417
Query: 482 ISQKYK 487
I++ Y+
Sbjct: 418 ITRSYE 423
>gi|358051316|ref|ZP_09145526.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
gi|357259136|gb|EHJ08983.1| preprotein translocase subunit SecY [Staphylococcus simiae CCM
7213]
Length = 430
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
FFK + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GI+P+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLTNITRYLAIILAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L +V +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAV-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG++ +D + ++ + +I+S ILL +G +YV EA+RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQSAFVGQEDTSLAWLKVLGLIVSLILLTIGAIYVLEAKRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A + A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDAEWAQNIANTA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNIGMVIYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVTQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|262197168|ref|YP_003268377.1| preprotein translocase subunit SecY [Haliangium ochraceum DSM
14365]
gi|262080515|gb|ACY16484.1| preprotein translocase, SecY subunit [Haliangium ochraceum DSM
14365]
Length = 448
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 236/418 (56%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNR---EAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
+ L LG LA+ R+GI++ L GVNR + + + L FSGG + +L I +L
Sbjct: 17 RILFTLGMLAVYRIGIFVTLPGVNRVEMQNLISTGGTGTFLGLFSVFSGGALEQLSIFAL 76
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+I+A I+ QLL + PKL L K EGE GRKK+ QYTRY ++G +IVQA+ +L
Sbjct: 77 GIMPYISASIILQLLTVVVPKLDQLNK-EGEQGRKKINQYTRYGTIGLSIVQAVFLSSWL 135
Query: 206 R------------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
VND + + +V LT G+AF ++GE+I++ +GNG SLLIF
Sbjct: 136 VGLGRGGGGYSAGEVVNDPGMWFHIMTVLTLTTGTAFLMWLGEQITERGIGNGISLLIFA 195
Query: 254 SIISYLPAS----FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
I++ +P + FGR+ + + L I + I I Y + A R+IP+ Y
Sbjct: 196 GIVAGMPDALTQLFGRSSTGDYDLFMLLVLLLIAVGTIAT---ICYFERAHRRIPVQYTK 252
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGG 369
R R +LP K+N SGV+P IF++S L P +A G ++ A ALNP
Sbjct: 253 RMVGRKMYAGTQTHLPLKINVSGVIPPIFASSILMFPAQIANMVGTPWMQSVANALNPND 312
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y + LI FF ++YT + +P DV++ LK+ G IP +RPGK TA ++ VL+RI+
Sbjct: 313 WRYNVIYVGLIVFFTFFYTAVTFNPVDVADNLKKSGGFIPGIRPGKKTAEYIDYVLTRIT 372
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G+V+L+ + PA+++ + + F GT +LI+VG A DT +++++ +I++ Y+
Sbjct: 373 AAGAVYLSAVCLVPALLQNWMQVPFY--FGGTGLLIVVGVALDTVQQIESHLITRNYE 428
>gi|409913282|ref|YP_006891747.1| preprotein translocase subunit SecY [Geobacter sulfurreducens
KN400]
gi|298506868|gb|ADI85591.1| preprotein translocase, SecY subunit [Geobacter sulfurreducens
KN400]
Length = 435
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 253/424 (59%), Gaps = 19/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + F+ P L + L LG LA+ R+G +IP G++ A Q +LL D FSG
Sbjct: 5 FQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSNALAHFFAQARGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EGE+GRKK++QYTRY ++ +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPSIEKLSK-EGESGRKKIIQYTRYGTIVLS 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQA+G + L V + + L +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQALGISIGLESMRGPAGELVVPNPGWGFRLMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASF---GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
SL+IF I++ +P + GR + Q ++ L + + F L++ IVYV+ +R++
Sbjct: 184 ISLIIFAGIVARIPTALLNTGRLIKTG-QLSLFVILLVVALMF-LVIAAIVYVERGQRRL 241
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
PI+YA R ++++LP KVN +GV+P IF++S + P T+A F + ++ A
Sbjct: 242 PIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINVPWVQTVAK 301
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
+L PG Y + I FF Y+YT + +P DV+E +K+ G IP +RPGK T+ +L
Sbjct: 302 SLTPGNLAYEIFYVAFIIFFCYFYTAVSFNPVDVAENVKKHGGYIPGIRPGKETSDYLDR 361
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
VL++++ G+++++ + P+V+ +L + F GT++LI VG DTA ++++ +I+
Sbjct: 362 VLTKLTFAGALYISAVCVLPSVLVGKFNLPFY--FGGTALLIAVGVGMDTAAQIESHLIT 419
Query: 484 QKYK 487
+ Y+
Sbjct: 420 RSYE 423
>gi|317153938|ref|YP_004121986.1| preprotein translocase subunit SecY [Desulfovibrio aespoeensis
Aspo-2]
gi|316944189|gb|ADU63240.1| preprotein translocase, SecY subunit [Desulfovibrio aespoeensis
Aspo-2]
Length = 433
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 245/416 (58%), Gaps = 15/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGI 142
L K L LA+ R+GI+IP+ GV+ A F N QN+L D FSGGG+ + I
Sbjct: 13 LKKKLLWTFALLAVYRMGIHIPIPGVDSAALADFFAN-AQNTLFGIFDMFSGGGLSNMSI 71
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL ++P+L+ LQK EGEAGRKK+ QYTRY +V +VQ
Sbjct: 72 FALGIMPYISASIILQLLTVVSPELKRLQKEEGEAGRKKITQYTRYLTVLITVVQGFAIA 131
Query: 203 LYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
L P V + L ++ LT G+ F ++GE++++ +GNG S++I+
Sbjct: 132 AGLESASSPTGAPMVLIPGIGFKLMTILTLTAGTVFLMWLGEQMTEKGIGNGISMIIYAG 191
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTS 313
I++ LPA+ TV + + I+ F++ LG IV+++ +R+IPI+YA R
Sbjct: 192 IVAGLPAAAINTVQLMTLGEISLFILLFILVFMVATLGFIVFMERGQRRIPIHYAKRQMG 251
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ +LP K+N++GV+P IF++S L P TLA+F+ + L+ + L+P Y
Sbjct: 252 RRMFGGQTTHLPLKINTAGVIPPIFASSILMFPATLAQFSSVQWLQDFSSFLSPDSIIYN 311
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I +I FF Y+YT + DP ++E +++QG IP +RPG T ++ VL+RI++ G+
Sbjct: 312 LLFIGIIIFFCYFYTAIMFDPKGIAENIQKQGGFIPGIRPGARTREYIDKVLARITLWGA 371
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P ++ + + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 372 FYVSAVCVLPMLLISNFGVPFY--FGGTSLLIVVGVAMDFMGRIESYLISRQYEGL 425
>gi|254281598|ref|ZP_04956566.1| preprotein translocase, SecY subunit [gamma proteobacterium
NOR51-B]
gi|219677801|gb|EED34150.1| preprotein translocase, SecY subunit [gamma proteobacterium
NOR51-B]
Length = 441
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 249/406 (61%), Gaps = 20/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R+G +IP+ G++ E DQN ++L + FSGG + R+ I +LGI+P+I+A
Sbjct: 27 LIVYRIGTHIPVPGIDPEQLSALFDQNQGTILGLANVFSGGALERMSILALGILPYISAS 86
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPYVNDF 212
I+ QL+ + P L+ L K+EGE+GR+K+ Q TRY +V A+VQ G + L + D
Sbjct: 87 IIMQLMTAVTPSLEQL-KKEGESGRRKISQMTRYLTVLLALVQGTGMTVGLANQGLTFDT 145
Query: 213 STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ 272
S + + ++T L G+ F ++GE+I++ +GNG SLLIF I++ LPA+ G+++ +A Q
Sbjct: 146 SITFYVIAITSLVTGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPAAIGQSMEQARQ 205
Query: 273 -DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
+ N + L I+ I ++ +V+++ +R++ +NYA R +S++LP KVN +
Sbjct: 206 GELNILVLLAIVALAIAVIYLVVFIERGQRRLTVNYAKRQQGNKQYQAQSSHLPLKVNMA 265
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL----IAFF 383
GV+P IF++S L P ++A++ G A L+ AVA+ PG P NI+L I FF
Sbjct: 266 GVIPAIFASSILLFPASVAQWFGSADNADWLQDLAVAIGPGQ----PLNIILFTGFIIFF 321
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
++YT L +P +V++ LKR GA +P +RPGK TA ++ VL+R++V GS ++A++ P
Sbjct: 322 CFFYTALMFNPQEVADNLKRSGAFVPGIRPGKQTANYIDGVLTRLTVFGSAYIALVCLLP 381
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ + G GTS+LI+V D +VQ+ ++S +Y+ +
Sbjct: 382 QFLVVMFNVPFYLG--GTSMLIVVVVVMDFMAQVQSHLMSHQYEGV 425
>gi|407005292|gb|EKE21453.1| hypothetical protein ACD_7C00238G0005 [uncultured bacterium]
Length = 423
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 232/410 (56%), Gaps = 10/410 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L GK L ++ L + RL IPL GV+ + N L +++FSGGG+ + I L
Sbjct: 14 LRGKILFIIALLVVFRLAANIPLPGVDLSQLKSFFENNQLFGMINAFSGGGMSNISIVLL 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G+ P+I + I+ QLL I PKL+ LQK EGEAGR+K +TR+ +V A+VQ + L
Sbjct: 74 GVGPYITSSIIMQLLTMIFPKLEKLQKEEGEAGRQKFNMWTRWITVPLAVVQTFAMINLL 133
Query: 206 RP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ ++D ST ++ + + T G+ F ++GE I++ +GNG S++IF I++ LP S
Sbjct: 134 KSQNVISDLSTFEMVNILVVATAGTIFLMWLGELITEKGIGNGVSIIIFAGIVAGLPGSI 193
Query: 264 GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+ +A F + G ++ ++ + G+V V E +R IPI+YA R S +
Sbjct: 194 SK-IAATFDSTDLFGYILFVLVGLITIAGVVMVNEGQRNIPISYAKRIRGNKTFGGTSTH 252
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF------TGIAALKKAAVALNPGGSFYLPTNI 377
LP +VN +GV+PIIF+ S + PG +A F +A + + L FY
Sbjct: 253 LPLRVNQAGVIPIIFAISIMLFPGLIANFFVNSDKETVAQVARFVSQLFQNQWFYGSAYF 312
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+++ F Y+YT + DP+ +SE L++QG +P VRPG +TA FL +++RI++ GS+FL
Sbjct: 313 IMVVLFTYFYTAVVFDPNKISENLQKQGGYVPGVRPGNATAEFLSRIINRITLSGSIFLG 372
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+A P +I+ T ++A GTS+LI V + ++++ +++ + Y+
Sbjct: 373 AIAVLPLIIQGFTGISALT-VGGTSILIAVSVVIEMVKQIEGQMVMRDYE 421
>gi|39997929|ref|NP_953880.1| preprotein translocase subunit SecY [Geobacter sulfurreducens PCA]
gi|39984874|gb|AAR36230.1| preprotein translocase, SecY subunit [Geobacter sulfurreducens PCA]
Length = 435
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 253/424 (59%), Gaps = 19/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + F+ P L + L LG LA+ R+G +IP G++ A Q +LL D FSG
Sbjct: 5 FQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSNALAHFFAQARGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EGE+GRKK++QYTRY ++ +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPSIEKLSK-EGESGRKKIIQYTRYGTIVLS 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQA+G + L V + + L +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQALGISIGLESMRGPAGELVVPNPGWGFRLMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASF---GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
SL+IF I++ +P + GR + Q ++ L + + F L++ IVYV+ +R++
Sbjct: 184 ISLIIFAGIVARIPTALLNTGRLIKTG-QLSLFVILLVVALMF-LVIAAIVYVERGQRRL 241
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
PI+YA R ++++LP KVN +GV+P IF++S + P T+A F + ++ A
Sbjct: 242 PIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINVPWVQTVAK 301
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
+L PG Y + I FF Y+YT + +P DV+E +K+ G IP +RPGK T+ +L
Sbjct: 302 SLTPGNLAYEIFYVAFIIFFCYFYTAVSFNPVDVAENVKKHGGYIPGIRPGKETSDYLDR 361
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
VL++++ G+++++ + P+V+ +L + F GT++LI VG DTA ++++ +I+
Sbjct: 362 VLTKLTFAGALYISAVCVLPSVLVGKFNLPFY--FGGTALLIAVGVGMDTAAQIESHLIT 419
Query: 484 QKYK 487
+ Y+
Sbjct: 420 RSYE 423
>gi|375086482|ref|ZP_09732889.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
gi|374564827|gb|EHR36107.1| preprotein translocase, SecY subunit [Megamonas funiformis YIT
11815]
Length = 418
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 229/395 (57%), Gaps = 11/395 (2%)
Query: 98 ALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVF 157
A+ RLG +IP+ GVN + +L LD FSGG + + + ++ I P+INA I+
Sbjct: 26 AVFRLGTHIPVPGVNPSVIEQLFNSGNLFGLLDLFSGGALSKFSLFAMSITPYINASIII 85
Query: 158 QLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWV 217
QLL + P L+ K EGE G KK+ + TRY +V A +QAIG + L+ + + S +
Sbjct: 86 QLLTVVVPTLEQWSK-EGEEGHKKITKTTRYLTVVLAFLQAIGMSIGLKQAIINPSITSI 144
Query: 218 LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--- 274
L LT G+ F +IGE+I+ +GNG SL+IF I++ LP + G T+ Q G
Sbjct: 145 LIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAALPQNLG-TIYNYLQAGTIS 203
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + A I ++ I+ V+ I Q+ +R++P++YA R R +S ++P KVN +G
Sbjct: 204 YFNVLFFAIIALAMIVFVIAI---QQGQRRVPVSYAKRVVGRKTYGGQSTHIPLKVNQAG 260
Query: 333 VMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
V+PIIF++S L P TLA+F +K A G F LLI FF Y+YT +
Sbjct: 261 VIPIIFASSVLMFPATLAQFVQTPWIKTIADYFQWGTPFQSAVYALLILFFTYFYTAVTF 320
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
D+++ LK+ G IP +RPG++TA +L +++RI++ G+ FLA +A P +I TH+
Sbjct: 321 KIPDLADNLKKYGGFIPGIRPGQATADYLDRIMTRITLAGAFFLAFIAILPTMIAGATHI 380
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 381 EGIH-FGGTALLIVVGVALDTMKQIESMVVMRHYE 414
>gi|291533607|emb|CBL06720.1| protein translocase subunit secY/sec61 alpha [Megamonas hypermegale
ART12/1]
Length = 395
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 229/396 (57%), Gaps = 11/396 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
A+ RLG +IP+ GVN + +L LD FSGG + + + ++ I P+INA I+
Sbjct: 2 FAVFRLGTHIPVPGVNPSVIEQLFNSGNLFGLLDLFSGGALSKFSLFAMSITPYINASII 61
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL + P L+ K EGE G KK+ + TRY +V A +QAIG + L+ + + S
Sbjct: 62 IQLLTVVVPTLEQWSK-EGEEGHKKITKTTRYLTVVLAFLQAIGMSIGLKQAIINPSITS 120
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG-- 274
+L LT G+ F +IGE+I+ +GNG SL+IF I++ LP + G T+ Q G
Sbjct: 121 ILIIAITLTAGTVFLMWIGEQITAHGVGNGISLIIFAGIVAALPQNLG-TIYNYLQAGTI 179
Query: 275 ---NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
N + A I ++ I+ V+ I Q+ +R++P++YA R R +S ++P KVN +
Sbjct: 180 SYFNVLFFAIIALAMIVFVIAI---QQGQRRVPVSYAKRVVGRKTYGGQSTHIPLKVNQA 236
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
GV+PIIF++S L P TLA+F +K A G F LLI FF Y+YT +
Sbjct: 237 GVIPIIFASSVLMFPATLAQFVQTPWIKTIADYFQWGTPFQSAVYALLILFFTYFYTAVT 296
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
D+++ LK+ G IP +RPG++TA +L +++RI++ G+ FLA +A P +I TH
Sbjct: 297 FKIPDLADNLKKYGGFIPGIRPGQATADYLDRIMTRITLAGAFFLAFIAILPTMIAGATH 356
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 357 IEGIH-FGGTALLIVVGVALDTMKQIESMVVMRHYE 391
>gi|197117343|ref|YP_002137770.1| preprotein translocase subunit SecY [Geobacter bemidjiensis Bem]
gi|197086703|gb|ACH37974.1| preprotein translocase, SecY subunit [Geobacter bemidjiensis Bem]
Length = 435
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 250/424 (58%), Gaps = 17/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
F + FK P L K L L LA+ R+G +IP G++ +A Q +LL D FSG
Sbjct: 5 FQNIFKIPELKKKVLFSLAMLAVYRIGCHIPTPGIDAQALAQFFKAAQGTLLGMFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EG+AGRKK++QYTRY ++ A
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVLPAVEKLSK-EGDAGRKKIIQYTRYGTIVLA 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQA G + L V + + L +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQAFGISIGLEAMRGPAGELVVPNPGWGFRLMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIP 304
SL+IF I++ +P + G + + G ++I+ ++ ++ +V+++ +R+IP
Sbjct: 184 ISLIIFAGIVARIPTAIGNSF-RLIKTGELSLFVLLLIAAVMFAVIAAVVFMERGQRRIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R +S++LP KVN +GV+P IF++S + P T+ F + ++ A+
Sbjct: 243 IHYAKRVVGLKTVGAQSSHLPLKVNMAGVIPPIFASSIIMFPATVGNFIDVPWVQAASKQ 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV++ +K+QG +P +RPGK T+ FL V
Sbjct: 303 LAPGKLLYEVLFVAFIVFFCYFYTAVTFNPVDVADNVKKQGGYVPGIRPGKETSDFLDAV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L++++ G+++++ + P+++ +L + F GTS+LI VG DT +++A +I++
Sbjct: 363 LTKLTFAGAIYISAVCVLPSILIGKFNLPFY--FGGTSLLIAVGVGMDTLSQIEAHLITR 420
Query: 485 KYKN 488
Y+
Sbjct: 421 SYEG 424
>gi|374300562|ref|YP_005052201.1| preprotein translocase subunit SecY [Desulfovibrio africanus str.
Walvis Bay]
gi|332553498|gb|EGJ50542.1| preprotein translocase, SecY subunit [Desulfovibrio africanus str.
Walvis Bay]
Length = 440
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 244/407 (59%), Gaps = 19/407 (4%)
Query: 97 LALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
LA+ R+GI+IP+ GV+ +A F + N+L D FSGGG+ L I +LGI+P+I+A
Sbjct: 26 LAVYRVGIHIPVPGVDAQALSDFFATVS-NTLFGLFDMFSGGGLSNLSILALGIMPYISA 84
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------- 206
I+ QLL ++P+L L K EG AGRKK+ QYTRY +V +VQ + + L
Sbjct: 85 SIILQLLTVVSPELSRLSKEEGAAGRKKITQYTRYGTVLITVVQGLAIAIGLENMTSPTG 144
Query: 207 -PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF-- 263
P V + L ++ +T G+ F +IGE+I++ +GNG SL+IF I++ +P +
Sbjct: 145 APIVVTAGWGFRLVTIVTMTAGTIFVMWIGEQITEKGIGNGISLIIFAGIVAGIPRALIN 204
Query: 264 -GRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
GR V+ + +I L + + +LV IV+++ +R+IPI+YA R R ++
Sbjct: 205 TGRLVSTG-EMSLFILLFIMAVMVCVLVF-IVFMERGQRRIPIHYAKRMMGRKMFGGQTT 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
+LP ++N++GV+P IF++S L P TLA F+ I L++ + NP Y + +I F
Sbjct: 263 HLPLRINTAGVIPPIFASSILMFPATLANFSDIEILQRISGWFNPTSVLYNVLFVGIIIF 322
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F Y+YT + DP +++E +++QG IP +RPG T ++ VL+RI++ GS++++ +
Sbjct: 323 FCYFYTAIIFDPQNIAENIRKQGGFIPGIRPGAKTKEYIDKVLARITLWGSLYISAICVL 382
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ ++ + G GTS+LI+VG A D K+++ +IS++Y+ +
Sbjct: 383 PMLLIAQFNVPYYYG--GTSLLIVVGVAMDFMGKIESYLISRQYEGL 427
>gi|253701902|ref|YP_003023091.1| preprotein translocase subunit SecY [Geobacter sp. M21]
gi|251776752|gb|ACT19333.1| preprotein translocase, SecY subunit [Geobacter sp. M21]
Length = 435
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 249/424 (58%), Gaps = 17/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
F + FK P L K L L LA+ R+G +IP G++ A Q +LL D FSG
Sbjct: 5 FQNIFKIPELKKKVLFSLAMLAVYRVGCFIPTPGIDAVALSSFFKAAQGTLLGMFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EG+AGRKK++QYTRY ++ A
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVLPAVEKLSK-EGDAGRKKIIQYTRYGTIVLA 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQA G + L V + + L +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQAFGISIGLEAMRGPAGELVVPNPGWGFRLMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIP 304
SL+IF I++ +P + G + + G ++I+ ++ ++ +V+++ +R+IP
Sbjct: 184 ISLIIFAGIVARIPTAIGNSF-RLMKTGELSLFVLLLIAAVMFAVIAAVVFMERGQRRIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R +S++LP KVN +GV+P IF++S + P T+ F + ++ A+
Sbjct: 243 IHYAKRVVGLKTVGAQSSHLPLKVNMAGVIPPIFASSIIMFPATVGNFIDVPWVQAASKQ 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV+E +K+QG +P +RPGK T+ FL V
Sbjct: 303 LAPGKMLYEILFVAFIVFFCYFYTAVTFNPVDVAENVKKQGGYVPGIRPGKETSDFLDAV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L++++ G+++++ + P+++ +L + F GTS+LI VG DT +++A +I++
Sbjct: 363 LTKLTFAGAIYISAVCVLPSILIGKFNLPFY--FGGTSLLIAVGVGMDTLAQIEAHLITR 420
Query: 485 KYKN 488
Y+
Sbjct: 421 SYEG 424
>gi|398993736|ref|ZP_10696674.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
gi|398134079|gb|EJM23254.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM21]
Length = 442
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 258/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYLTVALALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DFS +V +VT G+ F ++GE+I++ +GNG S+LIF+ I++ LP +
Sbjct: 141 QGVSFTGDFSFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|443468480|ref|ZP_21058692.1| Preprotein translocase secY subunit [Pseudomonas pseudoalcaligenes
KF707]
gi|442897642|gb|ELS24521.1| Preprotein translocase secY subunit [Pseudomonas pseudoalcaligenes
KF707]
Length = 442
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 257/425 (60%), Gaps = 29/425 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ I+P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAISPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ +DF +V +VT G+ F ++GE+I++ +GNG S+LIF I++ LP++
Sbjct: 141 QGVAFASDFGFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPSAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G + L+ A A+ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSESMGWLQDVAQAIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYG 498
+ YG
Sbjct: 433 LKGYG 437
>gi|308272959|emb|CBX29563.1| Preprotein translocase subunit secY [uncultured Desulfobacterium
sp.]
Length = 438
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 245/423 (57%), Gaps = 15/423 (3%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + FK P L + + LG + + R+G+++P+ G++ A + +LL D FSG
Sbjct: 6 FQNIFKIPELKKRVIVTLGLILVYRIGVHVPVPGIDSVALASFFAKAKGTLLGLFDMFSG 65
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G +L + +LGI+P+I+A I+ QLL P L+ L K EGE GRKK+ QYTRY +V +
Sbjct: 66 GAFEKLSVFALGIMPYISASIILQLLTVAVPHLERLSK-EGEQGRKKITQYTRYGTVLLS 124
Query: 195 IVQAIGQVLYLRPYVNDFSTDWV--------LTSVTLLTLGSAFTTYIGERISDLKLGNG 246
I+Q G + L + V L +V LT G+AF ++GE+I++ +GNG
Sbjct: 125 IIQGFGISIGLESMTSPGGAAIVIFPGWGFRLITVITLTAGTAFIMWLGEQITERGIGNG 184
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPI 305
SL+IF II +P + T I L +++ F++ V+ I++ ++ +R+IP+
Sbjct: 185 ISLIIFAGIICRMPNAIANTFKLVSTGEMSIFLVILLLIFMVAVVAVIIFAEQGQRRIPV 244
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
YA R R +S +LP K+N+SGV+P IF++S + P T+A F I ++ A +L
Sbjct: 245 QYAKRIIGRKMYGGQSTHLPLKLNTSGVIPPIFASSIMMFPATIASFIKIDTMQNFAKSL 304
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PG Y + LI FF Y+YT + +P DV+E +K+ G IP +RPGK T+ ++ VL
Sbjct: 305 TPGSLIYEILFVGLIIFFCYFYTAITFNPVDVAENMKKHGGYIPGIRPGKRTSDYIDKVL 364
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
+RI++ G+++++ + P+++ + + F GT++LI+VG A DT ++++ +IS+
Sbjct: 365 NRITLGGAIYISCICVLPSILISKLKVPFY--FGGTALLIVVGVAIDTISQIESHMISRN 422
Query: 486 YKN 488
Y+
Sbjct: 423 YEG 425
>gi|340751223|ref|ZP_08688046.1| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
gi|340562274|gb|EEO36790.2| preprotein translocase, SecY subunit [Fusobacterium mortiferum ATCC
9817]
Length = 412
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 242/394 (61%), Gaps = 8/394 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G YIP GV+ + Q+ +L ++ FSGG R+ I +LGIVP+IN+ IVF
Sbjct: 19 VARVGTYIPAPGVDVDRLATMTAQSDILGYINMFSGGAFKRVSIFALGIVPYINSSIVFS 78
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LLA I PK++++QK EGE+GR K+ Q+TRY ++G AI+QA G ++L+ V T +
Sbjct: 79 LLAVIIPKIEEIQK-EGESGRNKITQWTRYLTIGIAIIQAFGVCMWLQSVGLVTTPGTMF 137
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT++ LT G+ F +IGE+IS +GNG SLLIF ++IS P++ +T+
Sbjct: 138 FLTTIVTLTAGTVFLMWIGEQISIKGIGNGVSLLIFLNVISGGPSNVVQTIQSMRGSKFL 197
Query: 277 IGLATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I + +I +LV+ GIV Q +RKIPI+Y + + GG+ +++Y+P K+NS+GVMP
Sbjct: 198 IPVLLLIALAGILVVAGIVIFQLGQRKIPIHYVGKGFNGRGGMGQNSYIPLKLNSAGVMP 257
Query: 336 IIFSTSSLALPGTLARFTGIAALKKAAVAL--NPGGSFYLPTNILLIAFFNYYYTFLQLD 393
+IF++ + +P + K +A+ + Y+ ++I FF+++YT + D
Sbjct: 258 VIFASVVMMIPSAIVNAIPSEYTIKTTLAMVFSQSHPVYMIIYAVVIIFFSFFYTAIVFD 317
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P+ V++ LK+ G +IP +RPG T +L+ V++RI+ G+ FLA ++ P I + L
Sbjct: 318 PEKVADNLKQGGGTIPGIRPGTETVEYLEGVVTRITWGGAFFLAAISILPYAIFTSFGLP 377
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F F GT ++I+VG A DT +++ A ++ ++YK
Sbjct: 378 VF--FGGTGIIIVVGVAIDTVQQINAHLVMREYK 409
>gi|373494212|ref|ZP_09584817.1| preprotein translocase, SecY subunit [Eubacterium infirmum F0142]
gi|371968709|gb|EHO86163.1| preprotein translocase, SecY subunit [Eubacterium infirmum F0142]
Length = 427
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 242/413 (58%), Gaps = 16/413 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGIGRLGICS 144
+ K L + L + +G +IP+ G++R +Q L D FSGG I +
Sbjct: 16 MRAKILFTVMMLVIFCIGSHIPVPGIDRTQLANMFKNQGGLFDLFDLFSGGSFSNFTIFA 75
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-- 202
L I P++ A I+ QLL P + L K EG GRKK+ TRY +VG A++QA G
Sbjct: 76 LSITPYVTASIIVQLLTVAFPYFERLAK-EGNEGRKKMAAITRYMTVGLALIQAFGLTIG 134
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
L+ R VN +V+ ++ +LT G+AF ++GE+I++ +GNG S+LIF I++ +P+
Sbjct: 135 LFRRAVVNQTWFSFVVITL-VLTAGTAFLMWLGEQINENGIGNGISILIFAGIVARIPSD 193
Query: 263 FGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
R++A +++G N I L I +L+V+G++++Q+ R+IP+ YA R R +
Sbjct: 194 V-RSIALQYKEGAINIITLILFIAFALLVVVGVIFIQQGTRRIPVQYAKRVVGRKMYGGQ 252
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAAL--KKAAVALNPGGSFYLP 374
S ++P KVN +GV+P+IF+ S L P T+ F +G A K + + NPG Y
Sbjct: 253 STHIPLKVNQAGVIPVIFAVSLLQFPLTITYFLKSNSGFTAFVTKWLSPSGNPGVWVYAI 312
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
NI+LI FNY+YT + +P +V++ +K G IP +RPGK+T +L V+ RIS++G++
Sbjct: 313 FNIILIIAFNYFYTTISFNPIEVAQNMKSNGGFIPGIRPGKATIEYLAKVMGRISIVGAL 372
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
FLA++A P +I Q T L F GTS+LI+VG A D R+++ +++ + YK
Sbjct: 373 FLAVIATLPTLISQYTGLNI--RFGGTSLLIVVGVAIDVMRQLENQMVMRNYK 423
>gi|302388731|ref|YP_003824552.1| protein translocase subunit secY/sec61 alpha [Thermosediminibacter
oceani DSM 16646]
gi|302199359|gb|ADL06929.1| protein translocase subunit secY/sec61 alpha [Thermosediminibacter
oceani DSM 16646]
Length = 418
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 240/403 (59%), Gaps = 25/403 (6%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+G ++P+ G+N EA +++ +LL D +GG + + ++ I P+INA I+
Sbjct: 25 LVVFRIGAFVPVPGMNPEAVRQLIERGALLGFFDIIAGGAFKQFSVFAMSITPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL + P+ ++L K EG GRK + +YTRY +V ++QA G + R + +
Sbjct: 85 VQLLTIVIPRWEELAK-EGVEGRKVLARYTRYGTVILGLIQATGLAVGFRSALTNPGFFG 143
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
L V LT G+AF ++GE+I+D +GNG SLLIF I+S LP+ +Q +Y
Sbjct: 144 SLLVVLSLTAGTAFLMWVGEQITDKGIGNGISLLIFAGIVSRLPSG-------VYQMYDY 196
Query: 277 IGLATIIISFILL--------VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 328
I + T + +LL ++G++ VQ+AER+IP+ YA R R ++ ++P K+
Sbjct: 197 IRVGTANVLMVLLFAVFALVVIVGVIAVQQAERRIPVQYARRVVGRRVYGGQTTHIPMKL 256
Query: 329 NSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL----NPGGSFYLPTNILLIAFFN 384
N++GV+P+IF+ S L P T+A G K AV++ PGG Y LLI FF
Sbjct: 257 NAAGVIPVIFAMSILLFPSTIA---GFFPNSKVAVSIANFIEPGGWLYASLYALLIIFFT 313
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + +P DV++ +K+ G IP +RPG+STA +L +++RI+++G++FLA +A P
Sbjct: 314 YFYTAVTFNPVDVADNMKKYGGFIPGIRPGRSTAEYLNKIMTRITLIGAIFLAAIAVLPY 373
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+I T L + F GT++LI++G A +T + ++A+++ + Y+
Sbjct: 374 LITGVTSLNIY--FGGTALLIVIGVALETMKLIEAQMLMRHYQ 414
>gi|333980389|ref|YP_004518334.1| preprotein translocase subunit SecY [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823870|gb|AEG16533.1| preprotein translocase, SecY subunit [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 421
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 238/408 (58%), Gaps = 10/408 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L L + R+G +IP+ GVN E F L+ +L D SGG I ++
Sbjct: 14 LRSKLLFTLAMLFVFRIGAHIPVPGVNTEVFAKLLETGALFGFFDVISGGAFKNFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK++QYTRY +V A +QAIG L
Sbjct: 74 SITPYINASIIMQLLTVVIPALERLAK-EGEEGRKKIVQYTRYLTVVLAFIQAIGISFAL 132
Query: 206 R---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
R V+ ++L ++TL T G+AF +IGE+I++ +GNG SLLIF I+S +PA
Sbjct: 133 RNQHVLVSPTVGHYLLVALTL-TAGTAFLMWIGEQITEKGIGNGISLLIFAGIVSRVPAG 191
Query: 263 FGRTVAEAFQDGNYIGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
R V E Q G L+ I++ I L++ IV V E +R+IP+ YA R R +
Sbjct: 192 AVRVV-EYLQAGTINILSVILLLVIGALVIAAIVAVNEGQRRIPVQYAKRVVGRRVYGGQ 250
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS-FYLPTNILL 379
S +LP +VN +GV+P+IF++S L P LA + +A G+ + LL
Sbjct: 251 STHLPLRVNQAGVIPVIFASSILMFPEQLATWFQNTWFGNWYLAFFAWGTPLHTIIYALL 310
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y+YT + ++P D++E +K+ G IP +RPG+ TA ++ V+SR+++ G+VFLA++
Sbjct: 311 VIGFTYFYTAVIMNPVDIAENIKKYGGFIPGIRPGRPTAEYISRVMSRVTLAGAVFLALI 370
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + T + F GT++LI+VG A DT ++V++ ++ + Y+
Sbjct: 371 AILPNFVLLATRIPQIY-FGGTALLIVVGVALDTMKQVESHMLMRSYQ 417
>gi|423097624|ref|ZP_17085420.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q2-87]
gi|423699615|ref|ZP_17674105.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q8r1-96]
gi|387996905|gb|EIK58235.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q8r1-96]
gi|397885840|gb|EJL02323.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
Q2-87]
Length = 442
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 258/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL++ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMSAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DFS +V +VT G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVSFTADFSFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|421526088|ref|ZP_15972697.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
gi|402257847|gb|EJU08320.1| preprotein translocase subunit SecY [Fusobacterium nucleatum ChDC
F128]
Length = 426
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 242/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + Q+ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLSSMASQSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ + + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGAGVCLWLQSVGLIYNPGLSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +T+ + Q +
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTI-QTMQGNKF 210
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ ++++F+ + + GIV Q +RKIPI+Y + + GG+ +Y+P ++N++GVM
Sbjct: 211 LIPLLVLVAFLGTVTIAGIVLFQLGQRKIPIHYVGKGFTSKGGIGEKSYIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + ++ ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSTLSIKTTLSIIFGQNHPVYMIMYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E L++ G +IP +RPG+ T +L+ V SRI+ G FLAI++ P VI + L
Sbjct: 331 DPEKVAENLRQGGGTIPGIRPGEETVEYLEGVASRITWGGGFFLAIISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|372271987|ref|ZP_09508035.1| preprotein translocase subunit SecY [Marinobacterium stanieri S30]
Length = 431
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 247/398 (62%), Gaps = 12/398 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 23 RIGAHIPVPGINPDRLAALFDQNQGTILSLFNMFSGGALERMSILALGIMPYISASIIMQ 82
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL 218
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A +QA+G + L F+ D+
Sbjct: 83 LMTVVSPQLEQL-KKEGEAGRRKISQYTRYGTVILATLQALGMSVGLANQGVAFAADFSF 141
Query: 219 TSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
V ++TL G+ F ++GE+I++ +GNG S+LIF I++ LP++ G++ A Q D N
Sbjct: 142 YFVAVVTLVAGAVFLMWLGEQITEHGIGNGISILIFAGIVAGLPSAIGQSFEAARQGDLN 201
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L I + I V +V+++ +R+I INYA R R +S++LP KVN +GV+P
Sbjct: 202 ILALLAIAVLAIATVGFVVFMERGQRRITINYAKRQQGRRVYAAQSSHLPLKVNMAGVIP 261
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF++S L P ++ ++ G+ L+ A+AL PG Y+ I FF Y+YT +
Sbjct: 262 PIFASSILLFPASVGQWFGQSEGMEWLQDVALALGPGQPLYILLFATAIVFFCYFYTAIV 321
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
+P DV++ LK+ GA IP +RPG +A ++ TVLSR+++ G++++ ++ P + +
Sbjct: 322 FNPRDVADNLKKSGAFIPGIRPGDQSARYIDTVLSRLTLFGALYITAVSLMPQFLVVAWN 381
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 382 VPFY--FGGTSLLIVVVVVMDFMAQVQSHLMSHQYESL 417
>gi|147676675|ref|YP_001210890.1| preprotein translocase subunit SecY [Pelotomaculum
thermopropionicum SI]
gi|146272772|dbj|BAF58521.1| preprotein translocase subunit SecY [Pelotomaculum
thermopropionicum SI]
Length = 419
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 240/406 (59%), Gaps = 8/406 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L LG + + RLG ++P+ GVN + F + + D SGG + + ++
Sbjct: 14 LKAKLLYTLGMIFIFRLGAHVPVPGVNPDKFAELVSSGLIFGFFDVISGGALKNFSVFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ +YTRY +V A +Q +G V+ +
Sbjct: 74 SITPYINASIIMQLLTVVIPHLERLAK-EGEEGRKKITEYTRYLTVLLAFIQGLGMVVGV 132
Query: 206 R-PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ V +V+T++T+ T G+ F ++GE+I++ +GNG SLLIF I+S +P
Sbjct: 133 KGSLVQPGPLTYVMTALTI-TAGTTFLMWVGEQITEKGIGNGISLLIFAGIVSRVPQGVA 191
Query: 265 RTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
R + E G N + + +++ L++ G+V VQE +R+IP+ YA R R ++
Sbjct: 192 RVI-EYLNAGTINILSIIALVVIGALVIAGVVAVQEGQRRIPVQYAKRVVGRRIYGGQTT 250
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIA 381
+LP +VN +GV+P+IF++S L P TLAR F+ AA G + + LLI
Sbjct: 251 HLPLRVNQAGVIPVIFASSLLMFPETLARWFSNTAAANFYVRYFGWGTAAHTIFYALLII 310
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
F Y+YT + ++P DV++ +K+ G IP +RPG+ TA ++ ++SR+++ G++FLA++A
Sbjct: 311 AFTYFYTAVIMNPADVADNIKKYGGFIPGLRPGRPTAEYISRIMSRVTLFGAIFLALIAI 370
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + T + F GT++LI+VG A DT ++V+A ++ + Y+
Sbjct: 371 LPNFVLLATRIPNIY-FGGTALLIVVGVALDTMKQVEAHLLMRSYQ 415
>gi|239905878|ref|YP_002952617.1| preprotein translocase subunit SecY [Desulfovibrio magneticus RS-1]
gi|239795742|dbj|BAH74731.1| preprotein translocase secY subunit [Desulfovibrio magneticus RS-1]
Length = 437
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 245/416 (58%), Gaps = 15/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L +A+ R+G+++P+ GV+ A + +N+L D FSGGG+ L I
Sbjct: 15 LKKKLLWTFLLVAVYRIGVHVPVPGVDSAALADFFESAKNTLFGLFDMFSGGGLRNLSIF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P+L +QK EG AG+KK+ QYTRY +V +Q G +
Sbjct: 75 ALGIMPYISASIIIQLLTVVSPELAKMQKEEGAAGKKKITQYTRYGTVLITCIQGFGIAV 134
Query: 204 YLRPYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L + W +T++TL G+ F ++GE++++ +GNG SL+I++ I
Sbjct: 135 GLESMASPTGAPVVLMPGWGFRLMTIITLCAGTVFLMWLGEQLTEKGIGNGISLIIYSGI 194
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTS 313
++ LP + T + + G L I+I ++L ++ IV+++ +R+IPI YA R
Sbjct: 195 VAGLPRAVLSTF-DLLKAGELSPLMLILIVALMLAVLVAIVFMERGQRRIPIQYAKRMVG 253
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ +LP +VN++GV+P IF++S L P TL F+ + LK A +P Y
Sbjct: 254 RKMYGGQTTHLPLRVNTAGVIPPIFASSILLFPATLGEFSSVPWLKTVASLFSPQTMTYN 313
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I LI FF Y+YT + DP+D++E +++QG IP +RPG T ++ VL RI++ GS
Sbjct: 314 VIFIALIVFFCYFYTAIIFDPNDIAENIRKQGGFIPGIRPGAKTKEYIDKVLVRITLWGS 373
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P ++ Q ++ + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 374 MYISAVCVLPMMLIQQFNVPFY--FGGTSLLIVVGVAMDFMSQIESYLISRQYEGL 427
>gi|148263159|ref|YP_001229865.1| preprotein translocase subunit SecY [Geobacter uraniireducens Rf4]
gi|146396659|gb|ABQ25292.1| protein translocase subunit secY/sec61 alpha [Geobacter
uraniireducens Rf4]
Length = 435
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 253/423 (59%), Gaps = 17/423 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSG 134
F + F+ P L + L L LA+ R+G +IP G++ +A Q +LL D FSG
Sbjct: 5 FQNIFRIPELKKRVLFSLAMLAVYRVGCHIPTPGIDSQALAHFFKQAQGTLLGLFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EGEAGRKK++QYTRY ++ +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPAIEKLSK-EGEAGRKKIIQYTRYGTIVLS 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQ +G + L V + + + +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQGLGISIGLESMRGPAGELVVPNPGWGFRVMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATI-IISFILLVLG-IVYVQEAERKIP 304
SL+IF I++ +P + +V + G A I +++ + LV+ +V+V+ +R++P
Sbjct: 184 ISLIIFAGIVARIPTAIMNSV-RLLKTGELPLFAIIFVLTLMFLVIAAVVFVERGQRRLP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R ++++LP KVN +GV+P IF++S + P T+ F I ++ A+ +
Sbjct: 243 IHYAKRVVGLKTYGTQTSHLPLKVNMAGVIPPIFASSIIMFPATIGNFINIPWVQSASKS 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV+E +K+QG IP +RPGK T+ FL V
Sbjct: 303 LTPGNWAYNIFYVAFIVFFCYFYTAVTFNPVDVAENVKKQGGYIPGIRPGKETSEFLDRV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L++++ G+++++++ P+++ +L + F GT++LI VG DT ++++ +I++
Sbjct: 363 LTKLTFAGAIYISVVCVLPSILIGKFNLPFY--FGGTALLIAVGVGMDTVAQIESHLITR 420
Query: 485 KYK 487
Y+
Sbjct: 421 SYE 423
>gi|330812055|ref|YP_004356517.1| Sec protein secretion system subunit SecY [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380163|gb|AEA71513.1| Putative Sec protein secretion system, subunit SecY [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 428
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 258/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 12 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 67
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL++ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 68 MPYISASIIMQLMSAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 126
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DFS +V +VT G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 127 QGVSFTADFSFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 184
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 185 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 244
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 245 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 300
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 301 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 360
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 361 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 418
Query: 494 IDSYGS 499
+ YGS
Sbjct: 419 LKGYGS 424
>gi|320352933|ref|YP_004194272.1| protein translocase subunit SecY/sec61 alpha [Desulfobulbus
propionicus DSM 2032]
gi|320121435|gb|ADW16981.1| protein translocase subunit secY/sec61 alpha [Desulfobulbus
propionicus DSM 2032]
Length = 434
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 240/402 (59%), Gaps = 16/402 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R+G+ IP G+N EA ++N +L + FSGG + I +LGI+P+I+A
Sbjct: 24 LLVYRMGVQIPTPGINGEALTAFFEKNASTLFGMFNMFSGGALENFSIFALGIMPYISAS 83
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL + P+L+ L K EGE+GR+K+ QYTRY +V +I+Q L
Sbjct: 84 IIIQLLTVVVPQLETLSK-EGESGRRKITQYTRYGTVVLSIIQGFFIATGLEGMTSPNGV 142
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V D S + L +V LT G+AF ++GE++++ +GNG SL+IF+ I++ +P++ T
Sbjct: 143 PIVIDPSLHFKLMTVLTLTSGTAFIMWLGEQMTERGIGNGISLIIFSGIVARMPSAVANT 202
Query: 267 VAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ E + G + I + I+ L+V I++V+ ++R+IPI YA R R ++++L
Sbjct: 203 I-ELIKTGELSLIFVPLILALMFLIVAFIIFVETSQRRIPIQYAKRVVGRRVYGGQASHL 261
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P K+N SGV+P IF++S + P T+ F I +++ + A +PG +Y + +I FF
Sbjct: 262 PLKINVSGVIPPIFASSIMMFPATIGSFVHIDWVQRISAAFSPGTVYYYLLYVGMIVFFC 321
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++Y + DDV+E LK+ G IP +RPGK T+ FL + L R++V+G+++L+ + P
Sbjct: 322 FFYAAVSFKADDVAENLKKNGGFIPGIRPGKRTSEFLDSTLIRLTVVGAIYLSAVCVMPT 381
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
++ + + F GT++LI+VG A DT ++++ +I + Y
Sbjct: 382 LLIAELKVPFY--FGGTALLIVVGVAIDTISQIESHLIMRNY 421
>gi|376298196|ref|YP_005169426.1| preprotein translocase subunit SecY [Desulfovibrio desulfuricans
ND132]
gi|323460758|gb|EGB16623.1| preprotein translocase, SecY subunit [Desulfovibrio desulfuricans
ND132]
Length = 436
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 241/412 (58%), Gaps = 13/412 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
K L LA+ RLGI+IP+ GV+ A Q N+L D FSGGG+ R+ I +LG
Sbjct: 16 KLLWTFALLAVYRLGIHIPIPGVDSAALSEFFAQAQNTLFGVFDMFSGGGLKRMSIFALG 75
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL ++P+L+ LQK EGEAGRKK+ QYTRY +V +VQ L
Sbjct: 76 IMPYISASIILQLLTVVSPELKRLQKEEGEAGRKKITQYTRYGTVLITVVQGFAIATGLE 135
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + L ++ LT G+ F ++GE++++ +GNG SL+I+ II+
Sbjct: 136 SMSSPTGAPMVLYSGISFKLMTILTLTAGTVFLMWLGEQMTEKGIGNGISLIIYAGIIAG 195
Query: 259 LPASFGRTVA-EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
LPA+ T+ + + L +I++ + ++ IV+++ +R+IPI+YA R R
Sbjct: 196 LPAAVINTLQLMTVGEISLFILLFLIVAMVAVLAFIVFMERGQRRIPIHYAKRQQGRRMF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
++ +LP K+N++GV+P IF++S L P TLA+F+ L+ + P Y I
Sbjct: 256 GGQTTHLPLKINTAGVIPPIFASSILMFPATLAQFSNNKYLQDFSSYFRPDSILYNILYI 315
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+I FF Y+YT + DP ++E +++QG IP +RPG T ++ VL+RI++ G+ +++
Sbjct: 316 GIIIFFCYFYTAIMFDPKGIAENIQKQGGFIPGIRPGNRTREYIDKVLARITLWGAFYVS 375
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P V+ + + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 376 AVCVLPMVLISKFGVPFY--FGGTSLLIVVGVAMDFMGQIESYMISRQYEGL 425
>gi|397688461|ref|YP_006525780.1| preprotein translocase subunit SecY [Pseudomonas stutzeri DSM
10701]
gi|395810017|gb|AFN79422.1| preprotein translocase subunit SecY [Pseudomonas stutzeri DSM
10701]
Length = 442
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 255/421 (60%), Gaps = 21/421 (4%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPF 150
LL + + R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+
Sbjct: 25 LLMAIVVYRIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPY 84
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQAIG + L
Sbjct: 85 ISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAIGMSVGLAGQGV 143
Query: 211 DFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
FS D+ ++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++
Sbjct: 144 AFSNDFGFYFVAITTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFE 203
Query: 269 EAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFK 327
A Q D N I L + + + ++ +V+++ +R+I ++YA R R ++++LP K
Sbjct: 204 SARQGDINIIALLAVGLVAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLK 263
Query: 328 VNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL---- 379
VN +GV+P IF++S L P +L ++ G ++ L + ++ PG P NILL
Sbjct: 264 VNMAGVIPAIFASSILLFPASLGQWFGQSESMSWLADISQSIAPGQ----PLNILLFSAG 319
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ +
Sbjct: 320 IIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTIFGALYMTAV 379
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
P + ++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YG
Sbjct: 380 CLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYG 437
Query: 499 S 499
S
Sbjct: 438 S 438
>gi|358465900|ref|ZP_09175785.1| hypothetical protein HMPREF9093_00245 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069605|gb|EHI79498.1| hypothetical protein HMPREF9093_00245 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 426
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + ++ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLASMASKSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ A++Q G L+L+ V + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAVIQGTGVCLWLQSVGLVYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +TV + D
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVISRAPSSVIQTVQKMQGDKFL 211
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
I L ++++F+ + + GIV Q +RKIPI+Y + S GG+ +++P ++N++GVM
Sbjct: 212 IPLF-VLVAFLATVTIAGIVLFQLGQRKIPIHYVGKGFSSKGGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + + ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSDLQLKTTLSIVFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E L++ G +IP +RPG+ T +L+ V SRI+ G +FLA+++ P VI + L
Sbjct: 331 DPEKVAENLRQGGGTIPGIRPGEETVEYLEGVASRITWGGGLFLAVISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ ++YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMREYK 423
>gi|426411760|ref|YP_007031859.1| preprotein translocase subunit SecY [Pseudomonas sp. UW4]
gi|426269977|gb|AFY22054.1| preprotein translocase subunit SecY [Pseudomonas sp. UW4]
Length = 442
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 257/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DFS +V +VT G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVSFTADFSFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|406899808|gb|EKD42983.1| hypothetical protein ACD_72C00513G0004 [uncultured bacterium]
Length = 424
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 237/409 (57%), Gaps = 13/409 (3%)
Query: 91 LKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L ++ L + RL +IP+ GVN L N +L L+ FSGG + + LG+ P+
Sbjct: 19 LFVVAMLVVFRLASHIPVPGVNVANLKNYLAGNQILGLLNVFSGGTMENFSVIMLGVAPY 78
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR---- 206
I A I+FQLLA I P L+++ K EGE+G++++ YTRY +V A +Q+ G + L+
Sbjct: 79 ITASIIFQLLAMIVPALEEITK-EGESGQQRINMYTRYLTVPLAFLQSFGMIRLLQNSSS 137
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P ++D +T ++T +T +T G+ F ++GE IS+ K+GNG SLLIF I+S LP RT
Sbjct: 138 PILSDLTTFRMITIMTTITAGTMFLVWLGELISEKKVGNGMSLLIFAGIVSSLPTIL-RT 196
Query: 267 VAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
+ + + IL V+G+V++ E +R IP+NYA + S++LP
Sbjct: 197 AFVNYTPADLYTFVMMAGVAILTVVGVVFINEGQRNIPVNYAKQMRGNHVYGGSSSHLPI 256
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARF------TGIAALKKAAVALNPGGSFYLPTNILLI 380
+VN SGV+PIIF+ S + P +A+F ++ L +AL FY LL+
Sbjct: 257 RVNMSGVIPIIFAISLVLFPPMVAQFFVHARSAWLSTLAVKTIALFQDQVFYGVAYFLLV 316
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF Y+YT + P ++E L+RQG IP +RPGK T +L ++RI+++G+ FL ++A
Sbjct: 317 FFFTYFYTAVIFHPQKIAENLQRQGGFIPGIRPGKETEKYLGMTVNRINLIGATFLGLIA 376
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++E + T+F+ GTS+LI+V A + A+++++++ +Y I
Sbjct: 377 ILPLLVEGASGSTSFK-IGGTSLLIVVAVAIEAAKQIESQVTMHEYDRI 424
>gi|398868930|ref|ZP_10624319.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM78]
gi|398232191|gb|EJN18166.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM78]
Length = 442
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 258/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYLTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DFS +V +VT G+ F ++GE+I++ +GNG S+LIF+ I++ LP +
Sbjct: 141 QGVSFTGDFSFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|392423914|ref|YP_006464908.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
gi|391353877|gb|AFM39576.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
acidiphilus SJ4]
Length = 428
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 241/416 (57%), Gaps = 28/416 (6%)
Query: 92 KLLGYLALS----RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
K +GY L R+G +IP+ VN E L + +D+ SGG RL + +L I
Sbjct: 17 KKIGYTLLMFLIFRIGAHIPIPFVNHEVLKNMLGTGGMFDFMDTLSGGSFKRLTVFALSI 76
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P++ A I+ QLL + P L+ L K EGE GRKK+ QYTRY +V +QA G +R
Sbjct: 77 TPYVTASIILQLLTIVIPSLERLSK-EGEYGRKKITQYTRYGTVALGFIQAFGLTFGIRT 135
Query: 208 YVNDFSTDW----VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ S+ W L +LT G+AF ++GE I++ +GNG SL+IF I+S +P++
Sbjct: 136 ALMVPSSAWKWAVYLLVALVLTAGTAFLMWLGEAITENGVGNGISLIIFAGIVSRVPSAL 195
Query: 264 GR-----TVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
G TV E + +GLA I++ ++ G++YVQE R++ + YA R R
Sbjct: 196 GYLYSLFTVHE-INIFSLLGLAVIVV---FIIAGVIYVQEGTRRVSVQYAKRVVGRRVYG 251
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSF---- 371
+S+++P KVN +GV+P+IF+ S LA P T+A + +G A ++N G+
Sbjct: 252 GQSSHIPLKVNQAGVIPVIFAISLLAFPQTIATWMPTSGFARFVNTWFSMN--GTVQSIP 309
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL +LI FF Y+YT + +P DV++ LK+ G IP +RPG+ TA +L +LSRI++
Sbjct: 310 YLLVYGVLIIFFTYFYTAVTFNPADVADNLKKYGGFIPGLRPGRPTAEYLSKILSRITLA 369
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G +FLA++A P ++ T L F GTS+LI+VG A +T ++++++++S+ Y+
Sbjct: 370 GGIFLALIAILPTIVMGLTGLKNIY-FGGTSLLIVVGVALETMKQIESQLMSRHYQ 424
>gi|242278678|ref|YP_002990807.1| preprotein translocase subunit SecY [Desulfovibrio salexigens DSM
2638]
gi|242121572|gb|ACS79268.1| preprotein translocase, SecY subunit [Desulfovibrio salexigens DSM
2638]
Length = 436
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 240/405 (59%), Gaps = 16/405 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ R+GI+IP+ GV+ A + N+L D FSGGG+ L I +LGI+P+I+A
Sbjct: 26 LAVYRIGIHIPVPGVDSSALADFFESVSNTLFGLFDMFSGGGLRNLSIFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND--- 211
I+ QLL ++P ++ LQ+ EG GRKK+ QYTRY +V +VQ G + L +
Sbjct: 86 IIVQLLGVVSPTIKRLQE-EGAQGRKKITQYTRYGTVLITLVQGFGIAVGLESMTSPTGA 144
Query: 212 ---FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
W +T+LTL G+ F ++GE++++ +GNG S++IF I++ LP++ T
Sbjct: 145 PVVLHAGWAFRGITILTLTAGTVFLMWLGEQMTEKGIGNGISMIIFAGIVAGLPSAIFNT 204
Query: 267 VAEAFQDGNY-IGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
V Q G + L +++F++ +L IVY++ +R+IPI+YA R R ++ +L
Sbjct: 205 V-RLMQAGEITLFLLLFVMAFMVAILAFIVYMERGQRRIPIHYAKRMMGRKMMGGQTTHL 263
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P ++N++GV+P IF++S L P TLA F+ L K + P Y I LI FF
Sbjct: 264 PLRINTAGVIPPIFASSILMFPATLASFSNNEILSKFSAYFAPSSIVYNVVYIALIIFFC 323
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + DP ++E +++QG IP +RPG T ++ VL+RI++ GS+++A + P
Sbjct: 324 YFYTAIMFDPKGIAENIQKQGGFIPGIRPGNRTREYIDRVLTRITLWGSLYVAAICVLPM 383
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ + F GT++LI+VG A D K+++ +IS++Y+ +
Sbjct: 384 ILIAQFNVPFY--FGGTALLIVVGVAMDFMGKIESYMISRQYEGL 426
>gi|418322976|ref|ZP_12934277.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
gi|365230630|gb|EHM71716.1| preprotein translocase, SecY subunit [Staphylococcus pettenkoferi
VCU012]
Length = 430
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 245/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FFK + K L L + ++G YIP+ GVN AF + L++F GG +
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPVPGVNPNAFDQQQGSQGVTDLLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +G+ GRKK+ TRY +V A VQ
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGDVGRKKLTNVTRYFAVILAFVQ 125
Query: 198 AIGQVLYLRPYVN-----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG Y+ D S L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMAFQFNNYLKGALLIDQSIMSYLLIAVVLTTGTAFLMWLGEQITQFGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATI-----IISFILLVLGIVYVQEAERKIPINY 307
I+S LP+S + +AF + +A + I+ ILL +G +YV +A RK+PI Y
Sbjct: 186 AGILSTLPSSINQFYQQAFVGAEDVSMAWLKVIGLIVGLILLTIGAIYVLQALRKVPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--ALKKAAVAL 365
A + +++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A A K ++VA
Sbjct: 246 AKKQSAQRIGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADWAQKVSSVA- 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSNNIGMIVYIILIIAFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVVAILPILATKLMGLPQSIQVGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
Y+
Sbjct: 424 YR 425
>gi|224477200|ref|YP_002634806.1| preprotein translocase subunit SecY [Staphylococcus carnosus subsp.
carnosus TM300]
gi|229462805|sp|Q05217.2|SECY_STACT RecName: Full=Protein translocase subunit SecY
gi|222421807|emb|CAL28621.1| preprotein translocase SecY subunit [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 430
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 245/423 (57%), Gaps = 15/423 (3%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F +FFK + K L L + ++G YIP GVN AF N + L++F GG
Sbjct: 5 FVNFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGSQGVTDLLNTFGGGA 64
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ I ++GI+P+I A IV QLL I PK + K +G+ GRKK+ TRY ++ A
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGDVGRKKLNNVTRYFAIILAF 123
Query: 196 VQAIGQVLYLRPYVN-----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
+Q+IG Y+ D S L +LT G+AF ++GE+I+ +GNG S++
Sbjct: 124 IQSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISII 183
Query: 251 IFTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPI 305
IF I+S LP+S + +AF + ++ +A ++I +LL +G VYV +A RKIPI
Sbjct: 184 IFAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPI 243
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVA 364
YA + +++ G + YLP KVNS+GV+P+IF+ + LP TL F A ++ A
Sbjct: 244 QYAKKQSTQRLG-SNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQIANT 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
NP + + I+LI F Y+Y F+Q++P+ +S+ LK+QG+ +P +RPG+ T ++ V
Sbjct: 303 ANPSSNIGMVIYIILIIAFTYFYAFVQVNPEKMSDNLKKQGSYVPGIRPGEQTKKYITKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++ +
Sbjct: 363 LYRLTFVGSIFLAVIAILPILATKFMNLPQSIQVGGTSLLIVIGVAIETMKSLEAQVNQK 422
Query: 485 KYK 487
+YK
Sbjct: 423 EYK 425
>gi|20808641|ref|NP_623812.1| preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
gi|20517275|gb|AAM25416.1| Preprotein translocase subunit SecY [Thermoanaerobacter
tengcongensis MB4]
Length = 418
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 229/402 (56%), Gaps = 7/402 (1%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L LG L + RLG +IP+ G++ + L Q L D SGG I ++ IV
Sbjct: 17 RILYTLGMLVIFRLGSHIPVPGIDPKQIANILGQGQLFGFFDIISGGAFRNFTIFAMSIV 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL P L+ L K EGE GRKK+ QYTRY +V A++QAIG + LR
Sbjct: 77 PYINASIIMQLLTIAIPSLEQLAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLRSA 135
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
V + + + V LT G+ F ++GERI++ LGNG+SL+IF IIS +P T
Sbjct: 136 VINPTFFRLTVIVITLTAGTTFLMWLGERITENGLGNGSSLIIFAGIISRIPNMIYLT-H 194
Query: 269 EAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
E + G N G +++ +++++ I+ E +R+IP+ YA R R +S ++P
Sbjct: 195 EYIKAGTSNIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVVGRRVYGGQSTHIPI 254
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFNY 385
++N +GV+PIIF+ S L P LA F ++ L+ G Y +I LI F Y
Sbjct: 255 RINMAGVIPIIFAISLLQFPQQLATFFPHSSFYNFVQKWLSTNGLIYNLLDIFLIIGFTY 314
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+YT + +P D+S+ LK+ G IP +RPGK T +L VL+RI +G++FLA +A P V
Sbjct: 315 FYTAVIFNPQDISDNLKKYGGFIPGIRPGKPTTEYLTKVLNRIVFVGALFLAFIATMPVV 374
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ T L + F GT++LI VG A DT ++++ +I + Y+
Sbjct: 375 LMNVTGLQLY--FGGTALLIAVGVALDTMKQIEGHLIMRNYQ 414
>gi|333898859|ref|YP_004472732.1| preprotein translocase subunit SecY [Pseudomonas fulva 12-X]
gi|333114124|gb|AEF20638.1| preprotein translocase, SecY subunit [Pseudomonas fulva 12-X]
Length = 442
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ A VQAIG + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAFVQAIGMSVGLASQGVAFSVDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+VT G+ F ++GE+I++ +GNG S+LIF I++ LP++ G++ A Q D N
Sbjct: 152 HFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPSAIGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IFALIAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSLLLFPASLGAWFGQSEGMGWLQDISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYGS 438
>gi|404416705|ref|ZP_10998520.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
gi|403490909|gb|EJY96439.1| preprotein translocase subunit SecY [Staphylococcus arlettae
CVD059]
Length = 430
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 246/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
FFK + K L L + ++G YIP GVN AF + L++F GG +
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGSQGVTDLLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +GEAGRKK+ +TRY ++ A VQ
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGEAGRKKLNNFTRYFAIILAFVQ 125
Query: 198 AIGQVLYLRPY-----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG Y + D S L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMAFQFNNYLKGQLIMDQSITSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAF--QDG---NYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
I+S LP+S + +AF QD ++ + +++ +LL +G ++V +A RKIPI Y
Sbjct: 186 AGILSTLPSSLIQFYQQAFVGQDDVTMAWLKVIGLLVGMVLLTVGAIFVLQAVRKIPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--ALKKAAVAL 365
A + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A A K + VA
Sbjct: 246 AKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDADWAQKVSDVA- 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + ++LI F Y+Y F+Q++P+ ++E LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSNNIGMIVYVVLIIAFTYFYAFVQVNPEKMAENLKKQGSYVPGIRPGEQTKKYITRVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVIAILPIIATKVMSLPQSIQVGGTSLLIVIGVAIETMKSLEAQVGQKE 423
Query: 486 YK 487
Y+
Sbjct: 424 YR 425
>gi|404398241|ref|ZP_10989825.1| preprotein translocase subunit SecY [Pseudomonas fuscovaginae
UPB0736]
Length = 442
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 256/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ I+P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAISPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +V+ G+ F ++GE+I++ +GNG S+LIF+ I++ LP + G+
Sbjct: 141 QGVAFSADFGFHFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|262377292|ref|ZP_06070516.1| preprotein translocase, SecY subunit [Acinetobacter lwoffii SH145]
gi|262307745|gb|EEY88884.1| preprotein translocase, SecY subunit [Acinetobacter lwoffii SH145]
gi|407009715|gb|EKE24800.1| hypothetical protein ACD_6C00034G0009 [uncultured bacterium]
Length = 452
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 251/419 (59%), Gaps = 27/419 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IP+ G+N A + N +Q ++L + FSGG + R+ I +LG
Sbjct: 29 RMMFLIGALLVFRLGAHIPVPGINNAALENLFNANQGTILGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQAIG L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRQGTLFLALVQAIGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+T + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLNTGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ--DGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGL 318
+ ++F D L ++I F LL LG IV++++A+R+IP+NYA + R
Sbjct: 204 NLIMQSFSSVDNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRVFT 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGG 369
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 263 AQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGFIKRSLQDVALVLSPGQ 322
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 323 PLYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLT 382
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++A++ P V++ + + + G GTS+LI+V D ++Q+ + S +Y N
Sbjct: 383 FIGAIYIAVICLMPMVLQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQSHLTSHQYDN 439
>gi|431928670|ref|YP_007241704.1| protein translocase subunit SecY [Pseudomonas stutzeri RCH2]
gi|431826957|gb|AGA88074.1| protein translocase subunit secY/sec61 alpha [Pseudomonas stutzeri
RCH2]
Length = 442
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAVGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G + L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSESMGWLADVSQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYGS 438
>gi|338811108|ref|ZP_08623344.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
gi|337276931|gb|EGO65332.1| preprotein translocase subunit SecY [Acetonema longum DSM 6540]
Length = 418
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 221/391 (56%), Gaps = 9/391 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G +IP+ GVN +L +D FSGG + + + ++ I P+INA I+ QLL
Sbjct: 29 RAGTHIPVPGVNAAVIEQLFTTGNLFGLMDLFSGGALSKFSVFAMSITPYINASIIMQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ PK + K EGE GRKK+ Q TRY +V +QAIG LR + + S ++L
Sbjct: 89 TIVVPKFEQWAK-EGEEGRKKITQLTRYGTVLLGFIQAIGMAYGLRVAIINPSIGYILLI 147
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP----ASFGRTVAEAFQDGNY 276
LT G+ F ++GE+I++ +GNG SL+IF I+S LP + A GN
Sbjct: 148 ALTLTAGTVFLMWLGEQITEKGIGNGISLIIFAGIVSRLPDGLYVLYQYLAAGTIHIGNL 207
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ I ++ I+ V+ I Q+ +RKIP+ YA R R S ++P K+N +GV+PI
Sbjct: 208 LLFIIIALAMIVFVIAI---QQGQRKIPVQYAKRVVGRKTYGGHSTHIPLKINQAGVIPI 264
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDD 396
IF++S L P T+A+F + +K A G L+I FF Y+YT + L+ D
Sbjct: 265 IFASSVLMFPVTIAQFVDVGWVKTMASWFEWGTPLQTVLYALMILFFTYFYTAVTLNIPD 324
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
++E +K+ G IP +RPGK TA +L V+SRI++ G+VFLA++A P + T +
Sbjct: 325 MAENMKKYGGFIPGLRPGKPTADYLDRVMSRITLAGAVFLALIAILPNFVAAVTGIKGVY 384
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT ++++A I+ + Y+
Sbjct: 385 -FGGTALLIVVGVALDTMKQIEALILMRHYQ 414
>gi|442321573|ref|YP_007361594.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
gi|441489215|gb|AGC45910.1| preprotein translocase subunit SecY [Myxococcus stipitatus DSM
14675]
Length = 448
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 252/433 (58%), Gaps = 31/433 (7%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F + F+ L + L LA+ R+GI+I GV+R A +D L+S + F
Sbjct: 6 FANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLFNLF 65
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I LGI+P+++A I+ QLLA + P L+ LQK EG AGR+K+ QYTRY ++
Sbjct: 66 SGGALEQMSIFGLGIMPYVSASIIMQLLAVVIPSLERLQK-EGAAGRQKINQYTRYGTIV 124
Query: 193 FAIVQAIGQVLYL--------------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+++Q IG +L + V D S + +V LT G+AF ++GERI
Sbjct: 125 LSVIQGIGISRWLASLGRSDAGQSGFNQVVVPDDSVWFTFMTVISLTAGTAFIMWLGERI 184
Query: 239 SDLKLGNGTSLLIFTSIIS-YLPASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIV- 294
++ +GNG SL+IF I++ LP + T+ E Q I +A ++ + F+LL++ +V
Sbjct: 185 TERGIGNGISLIIFAGIVAGVLPGA--NTLLEMTQQ-EVIAVAEVLALLVFMLLIIAVVV 241
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 354
YV+ R+IPI YA R R ++ Y P KVN++GV+P IF+ + L+ P TL T
Sbjct: 242 YVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTAGVIPPIFAGAVLSFPATLG--TW 299
Query: 355 IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
L+ A A+ Y +LL+ FF Y+YT L PDDV++ +K+QG IP +RPG
Sbjct: 300 FPFLQDAQRAIEGNLWIYNGLFVLLVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPG 359
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA F++ VL+R++ G+++LA++ P+VI + L F GT++LI+VG A DT
Sbjct: 360 RQTAEFIERVLNRLTFGGALYLAVICVIPSVI--SGLLNVRFTFGGTALLIVVGVALDTV 417
Query: 475 RKVQAEIISQKYK 487
++++ +IS+ Y+
Sbjct: 418 QQIEGHLISRNYE 430
>gi|402698205|ref|ZP_10846184.1| preprotein translocase subunit SecY [Pseudomonas fragi A22]
Length = 442
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 257/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL++ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMSAVSPQLEQL-KKEGEAGRRKISQYTRYLTVALALVQAIGMSIGLAG 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
F+ D + +VT G+ F ++GE+I++ +GNG S+LIF+ I++ LP + G+
Sbjct: 141 QGVAFTGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|330505187|ref|YP_004382056.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
gi|328919473|gb|AEB60304.1| preprotein translocase subunit SecY [Pseudomonas mendocina NK-01]
Length = 442
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ A VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAFVQAIGMSVGLAS 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ ++T G+ F ++GE+I++ +GNG S+LIF I++ LP++ G+
Sbjct: 141 QGVAFSVDFGFHFVAITTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPSAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALIAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + A+ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSLLLFPASLGTWFGQSEGLGWLQDISQAIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P ++ ++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++
Sbjct: 377 TAVCLLPQFLQVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYDSLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|228474808|ref|ZP_04059539.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|314935852|ref|ZP_07843204.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|418620259|ref|ZP_13183065.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
gi|228271471|gb|EEK12839.1| preprotein translocase, SecY subunit [Staphylococcus hominis SK119]
gi|313656417|gb|EFS20157.1| preprotein translocase, SecY subunit [Staphylococcus hominis subsp.
hominis C80]
gi|374822867|gb|EHR86879.1| preprotein translocase, SecY subunit [Staphylococcus hominis
VCU122]
Length = 430
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 249/424 (58%), Gaps = 17/424 (4%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F FFK + K L L + ++G YIP GVN E F + + L++F GG
Sbjct: 5 FMSFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEPFEQQGSDQGVAALLNTFGGGA 64
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ I ++GI+P+I A IV QLL I PK + K +GE G++K+ TRY ++ A
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGEVGKRKLSNVTRYFAIILAF 123
Query: 196 VQAIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
+Q+IG Y ++ ++L +V +LT G+AF ++G++I+ +GNG S+
Sbjct: 124 IQSIGMAFQFNNYLGGKLIIHQSVMSYLLIAV-VLTTGTAFLIWLGDQITQFGVGNGISI 182
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIP 304
+IF I+S LP+S + V +AF + ++ + +I+ ILL +G +YV EA+RKIP
Sbjct: 183 IIFAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLILLTIGAIYVLEAKRKIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAV 363
I YA + +++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A + A
Sbjct: 243 IQYAKKQSAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQNIAE 301
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
NP ++ + ++LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++
Sbjct: 302 YANPSNTYGMIVYVILIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITK 361
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
VL R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++
Sbjct: 362 VLYRLTFVGSIFLAVIAILPIIATKFMNLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQ 421
Query: 484 QKYK 487
++YK
Sbjct: 422 KEYK 425
>gi|419954713|ref|ZP_14470849.1| preprotein translocase subunit SecY [Pseudomonas stutzeri TS44]
gi|387968577|gb|EIK52866.1| preprotein translocase subunit SecY [Pseudomonas stutzeri TS44]
Length = 442
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 251/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAVGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE++++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVAGAMFMMWLGEQMTERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G + L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSENMGWLADLSQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ SYGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKSYGS 438
>gi|78357280|ref|YP_388729.1| preprotein translocase subunit SecY [Desulfovibrio alaskensis G20]
gi|78219685|gb|ABB39034.1| preprotein translocase, SecY subunit [Desulfovibrio alaskensis G20]
Length = 437
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 241/415 (58%), Gaps = 13/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L LA R+GI++P+ GV+ A QN+L D FSGGG+ L I
Sbjct: 15 LKKKLLWTFLLLAAYRIGIHVPVPGVDSAALADFFASVQNTLFGLFDMFSGGGLRNLSIF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P+L+ + K EG AGRKK+ QYTRY +V A++Q G +
Sbjct: 75 ALGIMPYISASIIIQLLQVVSPELKRMAKEEGAAGRKKITQYTRYGTVLIAVIQGFGIAM 134
Query: 204 YLRPYVNDFSTDWVLT--------SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L + VL ++ LT G+ ++GE+I++ LGNG SL+IF+ I
Sbjct: 135 SLESMQSPTGASLVLAPGWGFRLTTILTLTTGTVLIMWLGEQITEKGLGNGISLVIFSGI 194
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSR 314
++ LP +T+ I + I++ F+ VL IV+++ +R+IPI+YA R R
Sbjct: 195 VAGLPGGLMKTIRLIGTGDLSIFMVLILLVFMAAVLAFIVFMERGQRRIPIHYAKRQMGR 254
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP 374
++++LP +VN++GV+P IF++S L P T+A F+ + L+ AA P Y
Sbjct: 255 KMYGGQTSHLPLRVNTAGVIPPIFASSLLLFPATVASFSSVEWLQTAAAYFAPHTLLYNV 314
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ LI FF ++YT + DP D++E LK QG +P +RPG T ++ VL+RI+V G++
Sbjct: 315 VFVALIIFFAFFYTAIIFDPKDIAENLKNQGGFVPGIRPGVKTREYIDKVLTRITVWGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++A + P V+ ++ + F GT +LI+VG A D +V++ +IS++Y+ +
Sbjct: 375 YIAAICVLPMVLIANMNVPFY--FGGTGLLIVVGVAMDFMSQVESHLISRQYEGL 427
>gi|307543845|ref|YP_003896324.1| preprotein translocase subunit SecY [Halomonas elongata DSM 2581]
gi|307215869|emb|CBV41139.1| preprotein translocase subunit SecY [Halomonas elongata DSM 2581]
Length = 443
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 247/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 32 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSILALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
LL ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQA G + L Y DFS
Sbjct: 92 LLTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVLLALVQATGMSVGLASQGIAYTADFS- 149
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T++ G+ F ++GE+I++ +GNG SLLIF+ I++ LP + G+ A DG
Sbjct: 150 -FYFTAIVTFVCGAVFLMWLGEQITEKGIGNGISLLIFSGIVAGLPGAVGQAFELARNDG 208
Query: 275 NYIGLATIIISF--ILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
+ L + +S I V +V+++ +R++ +NY R +S+YLP KVN +G
Sbjct: 209 AWNVLPLLALSALGIATVAFVVFIERGQRRLTVNYPRRQVGNKMYAGQSSYLPLKVNMAG 268
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P +L ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 269 VIPAIFASSILLFPASLGQWIGAGDGMEWLQRASQALGPGQPLYILLFAAAVVFFCFFYT 328
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 329 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLFGALYITAVSLMPQFLIV 388
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GTS+LI+V D +VQ+ ++S +Y+++ + ++ YGS
Sbjct: 389 AWNVPFF--FGGTSLLIVVVVIMDFMAQVQSHLMSHQYESVMKKSNLKGYGS 438
>gi|374619078|ref|ZP_09691612.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
gi|374302305|gb|EHQ56489.1| protein translocase subunit secY/sec61 alpha [gamma proteobacterium
HIMB55]
Length = 441
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 250/406 (61%), Gaps = 20/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R+G +IP+ G++ DQN ++L + FSGG + R+ I +LGI+P+I+A
Sbjct: 27 LIIYRIGTHIPVPGIDPAQLSALFDQNQGTILGLANVFSGGALERMSILALGILPYISAS 86
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPYVNDF 212
I+ QL+ + P+L D K+EGE+GRKK+ Q+TRY +VG A+VQ G + L + D
Sbjct: 87 IIMQLMTAVTPEL-DAIKKEGESGRKKISQWTRYLTVGLALVQGTGMTVGLANQGLTYDA 145
Query: 213 STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ 272
S + + ++T L G+ F ++GE+I++ +GNG SLLIF I++ LP + G+++ +A Q
Sbjct: 146 SLGFYVIAITSLVTGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPQAIGQSLEQARQ 205
Query: 273 -DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
+ N + L ++ I+++ +++++ +R+I +NYA R R +++LP KVN +
Sbjct: 206 GELNILILLGVLALAIVVIALVIFIERGQRRITVNYAKRQQGRQMYQAPASHLPLKVNMA 265
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL----IAFF 383
GV+P IF++S L P ++A++ G A L+ AVA+ PG P NI+L I FF
Sbjct: 266 GVIPAIFASSILLFPASVAQWFGSADSSDWLQDLAVAIGPGQ----PLNIILFTGFIVFF 321
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
++YT L +P +V++ LK+ GA +P +RPG+ TA ++ VL+R+++ GS ++A++ P
Sbjct: 322 CFFYTALMFNPSEVADNLKKSGAFVPGIRPGQQTANYIDGVLTRLTIFGSAYIALVCLLP 381
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ + G GTS+LI+V D +VQ+ ++S +Y+ +
Sbjct: 382 QFLVVMFNVPFYLG--GTSMLIVVVVVMDFMAQVQSHLMSHQYEGV 425
>gi|302036685|ref|YP_003797007.1| preprotein translocase, membrane subunit SecY [Candidatus
Nitrospira defluvii]
gi|300604749|emb|CBK41081.1| Preprotein translocase, membrane subunit SecY [Candidatus
Nitrospira defluvii]
Length = 437
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 251/420 (59%), Gaps = 14/420 (3%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFS 133
F + FK P L + L LG L + R+G +IP G+N EA L + +LL LD FS
Sbjct: 8 SFQNIFKIPELRTRVLFTLGMLIVYRVGAHIPTPGINGEALSDFLQKQGGALLGFLDIFS 67
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + RL I +LGI+P+I+A I+ QLL + P L L K EGE GRKK++QYTR+ ++
Sbjct: 68 GGSLSRLTIFALGIMPYISASIILQLLTVVIPHLSKLAK-EGERGRKKIIQYTRFGTIVI 126
Query: 194 AIVQAIGQVLYLRPYVND---FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTS 248
A++Q G + L S W +T++TL G+ F ++GE+I++ +GNG S
Sbjct: 127 ALIQGFGIAVGLEQMNQGAFVLSPGWGFRFMTVITLCAGTGFLMWLGEQITERGIGNGIS 186
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIPIN 306
L+IF I++ LPA+ +T + ++ G ++++ I+ +V IV+++ RK+P+
Sbjct: 187 LIIFAGIVARLPAAVAQTF-DLYKVGQLSFPLLVVLTLIMFGVVAAIVFLESGRRKVPVQ 245
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
YA R R +S ++P K+N++GV+P IF++S +A P T+A F +K L
Sbjct: 246 YAKRVIGRRVYGGQSTHIPLKINTAGVIPPIFASSIIAFPATIAGFFETPWIKAVGSQLA 305
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
PG Y + LI FF ++YT + ++P D+++ LK+ G +P +RPG+ T+ ++ +VL+
Sbjct: 306 PGSLLYTLMYVGLIVFFCFFYTAVVMNPVDMADNLKKYGGFVPGIRPGQRTSDYIYSVLT 365
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+I+ G+++LAI+ P + ++ + F GTS+LI++G DTA+++++ ++++ Y
Sbjct: 366 KITFAGAIYLAIVCVIPEFLIYKLNMPFY--FGGTSLLIVIGVGLDTAQQIESHLLNRNY 423
>gi|392422642|ref|YP_006459246.1| preprotein translocase subunit SecY [Pseudomonas stutzeri CCUG
29243]
gi|452750443|ref|ZP_21950192.1| preprotein translocase subunit SecY [Pseudomonas stutzeri NF13]
gi|390984830|gb|AFM34823.1| preprotein translocase subunit SecY [Pseudomonas stutzeri CCUG
29243]
gi|452005700|gb|EMD97983.1| preprotein translocase subunit SecY [Pseudomonas stutzeri NF13]
Length = 442
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQAIG + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAIGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G + L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSESMGWLADISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYGS 438
>gi|192361952|ref|YP_001981228.1| preprotein translocase subunit SecY [Cellvibrio japonicus Ueda107]
gi|190688117|gb|ACE85795.1| preprotein translocase, SecY subunit [Cellvibrio japonicus Ueda107]
Length = 445
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 254/416 (61%), Gaps = 16/416 (3%)
Query: 97 LALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
+ + R+G +IP+ G++ E A + N +Q ++L + FSGG + R+ I +LGI+P+I+A
Sbjct: 29 IVIYRIGTHIPVPGLDPERIANLFNQNQGTILGMFNMFSGGALERMSILALGIMPYISAS 88
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR--PYVNDF 212
I+ QLL + P L+ L K+EG+AGR+K+ QYTRY +V A VQA+ + Y +
Sbjct: 89 IIMQLLTAVTPSLEQL-KKEGDAGRRKINQYTRYFTVVLASVQALAMAVSFSGFAYGGEP 147
Query: 213 STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ 272
+ +V L G+ F ++GE++++ +GNG S+LIF I++ +P++ G+ A Q
Sbjct: 148 GFAYYFIAVVSLVTGAIFMMWLGEQVTERGIGNGISMLIFAGIVAGMPSAIGQAFESARQ 207
Query: 273 -DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
D N + L + I ++++ +V ++ +R+I +NYA R R +S++LP K+N S
Sbjct: 208 GDLNILALLIVAILALVIIWLVVRIERGQRRITVNYAKRQQGRQAYAAQSSHLPLKINMS 267
Query: 332 GVMPIIFSTSSLALPGTLARFTGIA-------ALKKAAVALNPGGSFYLPTNILLIAFFN 384
GV+P IF++S L P ++A++ G L++ A+A+ PG Y+ LI FF
Sbjct: 268 GVIPAIFASSILLFPASIAQWFGQGGDGVINNVLQEIALAIGPGQPLYILLFAGLITFFC 327
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT L +P +V++ LK+ GA IP +RPG+ +A ++ +VL+R++V+G+++++ + P
Sbjct: 328 FFYTALMFNPREVADNLKKSGAYIPGIRPGEHSAKYIDSVLTRLTVVGAIYMSAVCLLPE 387
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
+ T++ + G GTS+LI+V D +VQA ++S +Y+++ + ++ YGS
Sbjct: 388 FLIVVTNVPFYLG--GTSLLIVVVVLMDFMSQVQAHLMSHQYESLMKKSNLKGYGS 441
>gi|345018515|ref|YP_004820868.1| preprotein translocase subunit SecY [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033858|gb|AEM79584.1| preprotein translocase, SecY subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 418
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 236/403 (58%), Gaps = 9/403 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L LG L + RLG +IP+ GV+ + L Q L D SGG I ++ IV
Sbjct: 17 RILYTLGMLVIFRLGSHIPVPGVDPKLIAQILGQGQLFGFFDIISGGAFREFTIFAMSIV 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + L+
Sbjct: 77 PYINASIIMQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKSA 135
Query: 209 VNDFSTDWVLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
V + T + LT + + LT G+AF ++GE+I++ +GNG+SL+IF IIS +P T
Sbjct: 136 VIN-PTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFAGIISRIPNMIYLT- 193
Query: 268 AEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
+E Q G N G +++ +++++ I+ E +R+IP+ YA R R +S ++P
Sbjct: 194 SEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVVGRKVYGGQSTHIP 253
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFN 384
++N +GV+PIIF+ S L P LA F ++ L+ G Y +ILLI F
Sbjct: 254 IRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFT 313
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + +P DVS+ LK+ G IP +RPGK T +L VL+R++ +G++FLA +A P
Sbjct: 314 YFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDYLTRVLNRVTFVGALFLAFIATMPV 373
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ T L + F GT++LI VG A DT ++++ +I + Y+
Sbjct: 374 ILMNVTGLQLY--FGGTALLIAVGVALDTMKQIEGHLIMRNYQ 414
>gi|389580473|ref|ZP_10170500.1| preprotein translocase, SecY subunit [Desulfobacter postgatei 2ac9]
gi|389402108|gb|EIM64330.1| preprotein translocase, SecY subunit [Desulfobacter postgatei 2ac9]
Length = 439
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 250/415 (60%), Gaps = 26/415 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN---REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
K L L L + R+G+++P G++ E+F + +L S + FSGG + RL I +L
Sbjct: 18 KILITLALLFVYRVGVHVPTPGIDGAALESFFAS-ASGTLFSMFNMFSGGALERLSIFAL 76
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+I+A I+ +L+ + P L+ L K+EG+AGRKK Q TRY +V + +Q G + L
Sbjct: 77 GIMPYISASIILELMTVVIPYLEQL-KKEGDAGRKKKTQLTRYGTVVLSAIQGFGIAVGL 135
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
P V + L ++ LT G+AF ++GE+I++ +GNG SL+IF I++
Sbjct: 136 ESMTSPAGIPIVPYPGWGFRLMAIITLTAGTAFIMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 258 YLPAS---FGRTVAEAFQDGNYIGLATIIISFILLVL---GIVYVQEAERKIPINYASRY 311
+P++ GR ++ +GL +III +L+V I++++ A+R+IP++YA R
Sbjct: 196 NMPSAAIQMGRLLSTG-----EMGLFSIIILIVLMVAVIGAIIFMELAQRRIPVHYAKRV 250
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
R ++++LP K+N+SGV+P IF++S + P TLA+F + ++ A +PG +
Sbjct: 251 VGRKMYGGQTSHLPLKINTSGVIPPIFASSIIMFPTTLAQFINLPVMQTVAGMFSPGTIW 310
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y + I FF ++YT +Q +PDDV+E +K+ G IP +RPGK T+ ++ VL+RI+V
Sbjct: 311 YYLLYVGFIVFFCFFYTAVQFNPDDVAENMKKNGGYIPGIRPGKRTSEYIDKVLTRITVG 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
G+ +++++ P V+ ++ + F GT++LI+VG A DT ++++ +I+ Y
Sbjct: 371 GAAYVSVVCVLPTVLMDKFNVPFY--FGGTALLIVVGVAIDTISQIESHLITSNY 423
>gi|319787905|ref|YP_004147380.1| preprotein translocase subunit SecY [Pseudoxanthomonas suwonensis
11-1]
gi|317466417|gb|ADV28149.1| preprotein translocase, SecY subunit [Pseudoxanthomonas suwonensis
11-1]
Length = 450
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 249/417 (59%), Gaps = 20/417 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G ++P+ GVN +A + + ++ + FSGG + R + +L
Sbjct: 22 RLLFVLGALVVYRIGCFVPVPGVNPDAMLAMMQAQGGGIVDMFNMFSGGALHRFSVFALN 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +VG AIVQ L L+
Sbjct: 82 VMPYISASIVMQLAVHIFPTLKAMQK-EGESGRRKITQYSRIGAVGLAIVQGGSIALALQ 140
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 141 GQTAPGGMPVVYAPGMGFVLTAVVSLTAGTIFLMWLGEQVTERGIGNGVSLIIFAGIVAG 200
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + +T +A++D L +II+ ++ +V+V+ +R+I +NYA R RS
Sbjct: 201 LPGAVIQTF-QAYRDDQLNFLTLLIIAAVVAGFTWFVVFVERGQRRITVNYARRQGGRSA 259
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFY 372
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G A L++ A AL PG +
Sbjct: 260 YMNQTSFLPLKLNMAGVIPAIFASSILAFPATLSMWSGQATSATWLQRVANALGPGEPLH 319
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ LIA F ++YT L + + ++ LK+ GA IP +RPGK+TA ++ VL+R++ G
Sbjct: 320 MIALAALIAGFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATAEYIDGVLTRLTAAG 379
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ +L I+ P ++ T L F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 380 AAYLVIVCLLPELMR--TQLGTSFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYESL 434
>gi|359782254|ref|ZP_09285476.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
gi|359370047|gb|EHK70616.1| preprotein translocase subunit SecY [Pseudomonas psychrotolerans
L19]
Length = 428
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 253/424 (59%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 12 FLAIIVY----RIGAHIPVPGINPDQLAALFRQNEGTILSLFNMFSGGALERMSIFALGI 67
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QLL I+P+L+ L K+EGE+GR+K+ QYTRY ++ A+VQA G + L
Sbjct: 68 MPYISASIIMQLLTAISPQLEQL-KKEGESGRRKISQYTRYGTLVLALVQATGMSVGLAS 126
Query: 208 YVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 127 QGVAFSVGFSFYFVAVTTFVAGALFMMWLGEQITERGIGNGISMLIFAGIVAGLPRAIGQ 186
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L + + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 187 SFESARQGDINIFALIMVGVVAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQNSHL 246
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A A+ PG P NILL
Sbjct: 247 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAIAPGQ----PLNILLF 302
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 303 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 362
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 363 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 420
Query: 496 SYGS 499
YGS
Sbjct: 421 GYGS 424
>gi|388457571|ref|ZP_10139866.1| preprotein translocase subunit SecY [Fluoribacter dumoffii Tex-KL]
Length = 442
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 245/399 (61%), Gaps = 14/399 (3%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
RLG +IP+ G++ R A N QN++ + FSGG + R+ + ++GI+P+I+A I+ Q
Sbjct: 33 RLGAHIPVPGLDPARLANFFNEQQNTIFGLFNMFSGGALSRVTVFAIGIMPYISASIILQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L ++PKL+ L K+EGE+GR+K+ QYTRY ++ +I Q++G +L D+
Sbjct: 93 LFTVVSPKLEQL-KKEGESGRRKINQYTRYLTLVLSIFQSLGMARWLAGQQIALQADFSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
T+V L G+ F ++GE+I++ +GNG SL+IF+ I+S +P + +V + ++G
Sbjct: 152 YFTAVVTLVTGTMFLMWLGEQITEKGVGNGISLIIFSGIVSSMPTAIA-SVLQQVKEGQM 210
Query: 277 IGLATIIISFILLVLGIVY--VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
L III+ +++V+ ++ A+R+I +NYA R R ++++LP K+N SGV+
Sbjct: 211 QALTLIIIAVVVVVVTGFVVFMERAQRRIRVNYAQRTQGRKVYAAQTSHLPLKINMSGVI 270
Query: 335 PIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
P IF++S + LP TLA+F G+ L +AL+PG YL + I FF ++Y L
Sbjct: 271 PPIFASSIILLPATLAQFFSHTKGLGWLADVGMALSPGQPLYLIVYAVAIIFFAFFYAAL 330
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
+P D ++ LK+ GA IP +RPG+ T ++ V++R++++G+++L ++ P ++ T
Sbjct: 331 VFNPKDTADNLKKSGAYIPGIRPGEQTTKYIDGVMTRLTLVGAIYLVLVCLLPQILMYTW 390
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
H+ + F GTS+LI+V D +VQA +++Q+Y ++
Sbjct: 391 HVPFY--FGGTSLLIIVVVIMDFVAQVQAHLMTQQYDSL 427
>gi|400286831|ref|ZP_10788863.1| preprotein translocase subunit SecY [Psychrobacter sp. PAMC 21119]
Length = 448
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 254/419 (60%), Gaps = 27/419 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L+G L + RLG +IP+ G+N A + + ++N++LS + FSGG + R+ I +LG
Sbjct: 28 RLLFLIGALIVYRLGSHIPVPGINPVNLADLFSRNENTILSMFNMFSGGALERMSIMALG 87
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q+++ + P L+ L K+EGEAGR+K+ +YTR ++ A+VQ++G L
Sbjct: 88 IMPYISASIIVQMMSAVLPSLEAL-KKEGEAGRRKLNKYTRQGTLALALVQSLGMCAGLI 146
Query: 207 PYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
S+ + + +VT L G+ F ++GE+I++ +GNG S+LIF SI++ P
Sbjct: 147 SQNLTLSSGLTFYIPAVTSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVAGTPGMIS 206
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGI------VYVQEAERKIPINYASRYTS-RSGG 317
+++ + Q G +I+ FI ++LGI VY++ A+R++P+NYA + R
Sbjct: 207 QSIEQVNQ-----GQMNLIVLFIFVLLGIAVTAGIVYIERAQRRVPVNYAQKQQQGRKIY 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGG 369
Q+ ++LP K+N +GV+P IF++S L P +L ++ G + L+ A+ L+PG
Sbjct: 262 AQQQSHLPLKLNMAGVIPAIFASSLLLFPASLGQWVGQSTDPTFVQKILQNMALVLSPGQ 321
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YT L P +V+E LKR GA IP +RPG+ T +L VL+R++
Sbjct: 322 PLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGQQTQRYLDHVLNRLT 381
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V+ Q++ F+ GTS+LI+V D ++QA +++ +Y +
Sbjct: 382 FIGAMYMTVICLMPMVV-QSSFGVPFQ-LGGTSLLIMVVVVMDFISQIQAHLMTHQYHD 438
>gi|418292880|ref|ZP_12904810.1| preprotein translocase subunit SecY [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379064293|gb|EHY77036.1| preprotein translocase subunit SecY [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 442
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 251/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAVGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G ++ L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSESMSWLADISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYGS 438
>gi|389807447|ref|ZP_10204117.1| preprotein translocase subunit SecY [Rhodanobacter thiooxydans
LCS2]
gi|388444070|gb|EIM00191.1| preprotein translocase subunit SecY [Rhodanobacter thiooxydans
LCS2]
Length = 440
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 248/413 (60%), Gaps = 22/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
++G L + RLG +IP+ GVN EA ++ N L+ + FSGG + R + +LG++P+I+
Sbjct: 25 VIGALVVFRLGSFIPVPGVNPEAMTNLVNGNGLMDMFNMFSGGALERFSVFALGVIPYIS 84
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------ 206
A IVFQ++ + P LQ L+K EGEAG++K+ YTRYA+V A Q+ G + L+
Sbjct: 85 ASIVFQMMGAVVPSLQSLRK-EGEAGKRKMTMYTRYATVALAAFQSFGIAVALQGQVAAG 143
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V ++ +SV LT G+ F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 144 GAPVVYTPGFGFIFSSVVGLTAGTMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPGAVV 203
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQR 320
T+ A + L +++ F L LG +V+++ A+R+I +NYA R + + +
Sbjct: 204 HTLGMA--SNGELSLIKLLMVFA-LALGVTAFVVFMERAQRRITVNYARRSGGQKAYMNQ 260
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAA--LKKAAVALNPGGSFYLPTN 376
S+ LP K+N SGV+P IF++S L P T + TG + L+ AL+PG Y
Sbjct: 261 SSNLPLKINMSGVIPPIFASSLLMFPATAVSWFSTGQQSRWLQDLTQALSPGNPLYETVF 320
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+L+ F ++YT + + D+ ++ LKR GA IP +RPGK+TA+++ V++R++ +G+++L
Sbjct: 321 SVLVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPGKATASYIDAVMTRLTGVGALYL 380
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ P+ ++ H+ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 381 VLVCLVPSFMQSAWHVPFY--FGGTSLLIVVVVVMDFTAQVQAHLVSHQYESL 431
>gi|421616511|ref|ZP_16057518.1| preprotein translocase subunit SecY [Pseudomonas stutzeri KOS6]
gi|409781555|gb|EKN61146.1| preprotein translocase subunit SecY [Pseudomonas stutzeri KOS6]
Length = 442
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGALVLAIVQAVGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G + L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSESMGWLADISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYGS 438
>gi|326390642|ref|ZP_08212197.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392939557|ref|ZP_10305201.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
gi|325993320|gb|EGD51757.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|392291307|gb|EIV99750.1| preprotein translocase, SecY subunit [Thermoanaerobacter
siderophilus SR4]
Length = 418
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 236/403 (58%), Gaps = 9/403 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L LG L + RLG +IP+ GV+ + L Q L D SGG I ++ IV
Sbjct: 17 RILYTLGMLVIFRLGSHIPVPGVDPKLIAQILGQGQLFGFFDIISGGAFREFTIFAMSIV 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + L+
Sbjct: 77 PYINASIIMQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKRA 135
Query: 209 VNDFSTDWVLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
V + T + LT + + LT G+AF ++GE+I++ +GNG+SL+IF IIS +P T
Sbjct: 136 VIN-PTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFAGIISRIPNMIYLT- 193
Query: 268 AEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
+E Q G N G +++ +++++ I+ E +R+IP+ YA R R +S ++P
Sbjct: 194 SEYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVVGRKVYGGQSTHIP 253
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFN 384
++N +GV+PIIF+ S L P LA F ++ L+ G Y +ILLI F
Sbjct: 254 IRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFT 313
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + +P DVS+ LK+ G IP +RPGK T +L VL+R++ +G++FLA +A P
Sbjct: 314 YFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDYLTRVLNRVTFVGALFLAFIATMPV 373
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ T L + F GT++LI VG A DT ++++ +I + Y+
Sbjct: 374 ILMNVTGLQLY--FGGTALLIAVGVALDTMKQIEGHLIMRNYQ 414
>gi|352086294|ref|ZP_08953835.1| preprotein translocase, SecY subunit [Rhodanobacter sp. 2APBS1]
gi|351679593|gb|EHA62730.1| preprotein translocase, SecY subunit [Rhodanobacter sp. 2APBS1]
Length = 440
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 250/414 (60%), Gaps = 24/414 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
++G L + RLG +IP+ GVN EA ++ N L+ + FSGG + R + +LG++P+I+
Sbjct: 25 VIGALVVFRLGSFIPVPGVNPEAMTNLVNGNGLMDMFNMFSGGALERFSVFALGVIPYIS 84
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------ 206
A IVFQ++ + P LQ L+K EGEAG++K+ YTRYA+V A Q+ G + L+
Sbjct: 85 ASIVFQMMGAVVPSLQSLRK-EGEAGKRKMTMYTRYATVALAAFQSFGIAVALQGQVAAG 143
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V ++ +SV LT G+ F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 144 GAPVVYTPGFGFIFSSVVGLTAGTMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPGAVV 203
Query: 265 RTVAEAFQDGNYIGLATIIISFILLV-LG----IVYVQEAERKIPINYASRYTSRSGGLQ 319
T+ A +G L+ I + +L+V LG +V+++ A+R+I +NYA R + +
Sbjct: 204 HTLGMA-SNGE---LSLIKLLMVLVVTLGVTGFVVFMERAQRRITVNYARRSGGQKAYMN 259
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAA--LKKAAVALNPGGSFYLPT 375
+S+ LP K+N SGV+P IF++S L P T + TG + L+ AL+PG Y
Sbjct: 260 QSSNLPLKINMSGVIPPIFASSLLMFPATAVSWFSTGQKSRWLQDLTQALSPGNPLYETV 319
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+ F ++YT + + D+ ++ LKR GA IP +RPGK+TA ++ V++R++ +G+++
Sbjct: 320 FSVLVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPGKATAGYIDAVMTRLTGVGALY 379
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
L ++ P+ ++ H+ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 380 LVLVCLVPSFMQSAWHVPFY--FGGTSLLIVVVVVMDFTAQVQAHLVSHQYESL 431
>gi|49189|emb|CAA49691.1| secY [Staphylococcus carnosus]
Length = 430
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 244/421 (57%), Gaps = 15/421 (3%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FFK + K L L + ++G YIP GVN AF N + L++F GG +
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGSQGVTDLLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +G+ GRKK+ TRY ++ A +Q
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGDVGRKKLNNVTRYFAIILAFIQ 125
Query: 198 AIGQVLYLRPYVN-----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG Y+ D S L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPINY 307
I+S LP+S + +AF + ++ +A ++I +LL +G VYV +A RKIPI Y
Sbjct: 186 AGILSTLPSSLIQFYQQAFVGQSDTSMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALN 366
A + +++ G + YLP KVNS+GV+P+IF+ + LP TL F A ++ A N
Sbjct: 246 AKKQSTQRLG-SNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQIANTAN 304
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P + + I+LI F Y+Y F+Q++P+ +S+ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 305 PSSNIGMVIYIILIIAFTYFYAFVQVNPEKMSDNLKKQGSYVPGIRPGEQTKKYITKVLY 364
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++ ++Y
Sbjct: 365 RLTFVGSIFLAVIAILPILATKFMNLPQSIQVGGTSLLIVIGVAIETMKSLEAQVNQKEY 424
Query: 487 K 487
K
Sbjct: 425 K 425
>gi|146281190|ref|YP_001171343.1| preprotein translocase subunit SecY [Pseudomonas stutzeri A1501]
gi|339492767|ref|YP_004713060.1| preprotein translocase subunit SecY [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|386019371|ref|YP_005937395.1| preprotein translocase subunit SecY [Pseudomonas stutzeri DSM 4166]
gi|145569395|gb|ABP78501.1| secretion protein SecY [Pseudomonas stutzeri A1501]
gi|327479343|gb|AEA82653.1| preprotein translocase subunit SecY [Pseudomonas stutzeri DSM 4166]
gi|338800139|gb|AEJ03971.1| preprotein translocase subunit SecY [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 442
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ AIVQA+G + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAIVQAVGMSVGLAGQGVAFSNDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A Q D N
Sbjct: 152 YFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPGALGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I L + + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L ++ G + L + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGQWFGQSENMGWLADISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSLMKKANLKGYGS 438
>gi|254427344|ref|ZP_05041051.1| preprotein translocase, SecY subunit [Alcanivorax sp. DG881]
gi|196193513|gb|EDX88472.1| preprotein translocase, SecY subunit [Alcanivorax sp. DG881]
Length = 440
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 246/421 (58%), Gaps = 31/421 (7%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
LLG L + R+G +IP+ G+N EA + N +++++L + FSGG + R+ I +LGI+P+
Sbjct: 11 LLGALVVFRVGAHIPVPGMNPEALQQMFNNNRDTILGLFNMFSGGSLERMSIFALGIMPY 70
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-------L 203
I A IV QL+ + P L+ L+K EGE GR+K+ QYTRY +V +Q+ G V +
Sbjct: 71 ITASIVIQLMTAVVPTLEQLRK-EGEQGRRKITQYTRYLTVALGAIQSFGMVAGLNSQGI 129
Query: 204 YLRPYVNDFS--TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
L P + +V+ L G+ F ++GE+I++ +GNG S+LIF SI+S LP
Sbjct: 130 TLLPETASTMQIASFYFVAVSTLVTGTVFLMWLGEQITERGIGNGISMLIFASIVSGLPG 189
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLV-----LGIVYVQEAERKIPINYASRYTSRSG 316
+ VA+ F+ L+ I++ F+ LV G+VYV+ +R+I +NYA R R
Sbjct: 190 A----VAQTFESARTGDLSLIMMLFVFLVAMAVIFGVVYVERGQRRITVNYARRQQGRRV 245
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--------ALKKAAVALNPG 368
+ ++LP KVN +GV+P IF++S L P +L ++ + AL+ + AL PG
Sbjct: 246 YAAQQSHLPLKVNMAGVIPAIFASSILLFPASLTQWFSDSNPDSWWGQALRNVSEALLPG 305
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
Y+ L I FF Y+YT L +P DV++ LK+ GA IP +RPG+ +A ++ TV+ R+
Sbjct: 306 TPLYILLFTLAIVFFCYFYTALVFNPKDVADNLKKSGAYIPGIRPGEQSARYIDTVMGRL 365
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G+V++ ++ P ++ ++ + G GTS+LI+V D +V + + S +Y+
Sbjct: 366 TLIGAVYMTLVCLLPLGLQAVANVPFYLG--GTSLLIVVVVVMDFWSQVNSHLTSTQYEK 423
Query: 489 I 489
+
Sbjct: 424 L 424
>gi|389799018|ref|ZP_10202024.1| preprotein translocase subunit SecY [Rhodanobacter sp. 116-2]
gi|388443944|gb|EIM00075.1| preprotein translocase subunit SecY [Rhodanobacter sp. 116-2]
Length = 440
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 247/413 (59%), Gaps = 22/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
++G L + RLG +IP+ GVN EA ++ N L+ + FSGG + R + +LG++P+I+
Sbjct: 25 VIGALVVFRLGSFIPVPGVNPEAMTNLVNGNGLMDMFNMFSGGALERFSVFALGVIPYIS 84
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------ 206
A IVFQ++ + P LQ L+K EGEAG++K+ YTRYA+V A Q+ G + L+
Sbjct: 85 ASIVFQMMGAVVPSLQSLRK-EGEAGKRKMTMYTRYATVALAAFQSFGIAVALQGQVAAG 143
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V ++ +SV LT G+ F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 144 GAPVVYTPGFGFIFSSVVGLTAGTMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPGAVV 203
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQR 320
T+ A + L +++ F L LG +V+++ A+R+I +NYA R + + +
Sbjct: 204 HTLGMA--SNGELSLIKLLMVFA-LALGVTAFVVFMERAQRRITVNYARRSGGQKAYMNQ 260
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAA--LKKAAVALNPGGSFYLPTN 376
S+ LP K+N SGV+P IF++S L P T + TG + L+ AL+PG Y
Sbjct: 261 SSNLPLKINMSGVIPPIFASSLLMFPATAVSWFSTGQQSRWLQDLTQALSPGNPLYETVF 320
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+L+ F ++YT + + D+ ++ LKR GA IP +RPGK+TA ++ V++R++ +G+++L
Sbjct: 321 SVLVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPGKATAGYIDAVMTRLTGVGALYL 380
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ P+ ++ H+ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 381 VLVCLVPSFMQSAWHVPFY--FGGTSLLIVVVVVMDFTAQVQAHLVSHQYESL 431
>gi|405982850|ref|ZP_11041161.1| preprotein translocase, SecY subunit [Slackia piriformis YIT 12062]
gi|404389559|gb|EJZ84635.1| preprotein translocase, SecY subunit [Slackia piriformis YIT 12062]
Length = 426
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 252/419 (60%), Gaps = 16/419 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL-LSTLDSFSGGGI 137
D FK P L K L LG LAL R G Y+P+ G+ F Q+ + ++ LD F+GG +
Sbjct: 7 DAFKVPELRNKILFTLGILALYRFGAYVPVPGIPFNEFANAFAQSGVSMAMLDLFTGGAL 66
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ SLGI+P+I A I+ QL+ + P + K EGE+GRKK+ Q TR+ ++G ++
Sbjct: 67 SHFSVFSLGIMPYITASIIMQLMQGVIPAVGRWAK-EGESGRKKITQVTRFMTLGLGLIN 125
Query: 198 AIGQVLYLR--PYVNDFSTDW--VLTSVTL---LTLGSAFTTYIGERISDLKLGNGTSLL 250
AIG + + Y FS++ ++T + + L G+AF ++GE I+ +GNG SL+
Sbjct: 126 AIGYLFLFKSSAYGVVFSSELPEIVTDIVVVFTLVAGTAFIMWMGELITQRGIGNGMSLI 185
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL---GIVYVQEAERKIPINY 307
IFTSIIS +P++ +V Q +G+ I+ ++++L I++V+ A+R+IP+NY
Sbjct: 186 IFTSIISRVPSAIFSSVN--LQSDMGMGIVVTILIVLVVLLCIPAIIFVERAQRRIPVNY 243
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R R ++ Y+P KVN++GV+PIIF++ + P LA I L AA A++
Sbjct: 244 AKRVQGRRMMGGQTTYIPLKVNAAGVIPIIFASCLIYFPAQLAALFNIGWLTAAADAMSS 303
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G ++ T ++L+ FF Y+YT + +P++ S+ L+RQG IP VRPG +T ++K V++R
Sbjct: 304 GWINWILT-LVLVVFFAYFYTSMVFNPEETSDNLRRQGGFIPGVRPGSATTDYIKRVINR 362
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+++ G +F+A++A P+++ T + F GTS+LI++G A DT K+++++ Y
Sbjct: 363 VTLPGGLFIALIAVVPSILFYFTGNQLIQAFGGTSILIMIGVALDTMSKIESQLKMHNY 421
>gi|146308903|ref|YP_001189368.1| preprotein translocase subunit SecY [Pseudomonas mendocina ymp]
gi|421503842|ref|ZP_15950787.1| preprotein translocase subunit SecY [Pseudomonas mendocina DLHK]
gi|145577104|gb|ABP86636.1| protein translocase subunit secY/sec61 alpha [Pseudomonas mendocina
ymp]
gi|400345346|gb|EJO93711.1| preprotein translocase subunit SecY [Pseudomonas mendocina DLHK]
Length = 442
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 249/413 (60%), Gaps = 21/413 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW-- 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ A VQAIG + L FS D+
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAFVQAIGMSVGLASQGVAFSVDFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
++T G+ F ++GE+I++ +GNG S+LIF I++ LP++ G++ A Q D N
Sbjct: 152 HFVAITTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPSAIGQSFESARQGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IFALIAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + A+ PG P NILL I FF ++Y
Sbjct: 272 AIFASSLLLFPASLGAWFGQSEGLGWLQDISQAIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYDSLMKKANLKGYGS 438
>gi|118579139|ref|YP_900389.1| preprotein translocase subunit SecY [Pelobacter propionicus DSM
2379]
gi|118501849|gb|ABK98331.1| protein translocase subunit secY/sec61 alpha [Pelobacter
propionicus DSM 2379]
Length = 435
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 252/420 (60%), Gaps = 15/420 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGG 136
+ F+ P L + L L LA+ R+G +IP G++R A Q +LL D FSGG
Sbjct: 7 NIFRIPELKKRVLFSLAMLAVYRIGCHIPTPGIDRMALSHFFKQAQGTLLGLFDMFSGGA 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ RL + +LGI+P+I++ I+FQLL + P ++ L K EGE+GRKK++QYTRY ++ +IV
Sbjct: 67 LERLSVFALGIMPYISSSIIFQLLTVVVPAIEKLSK-EGESGRKKIIQYTRYGTIVLSIV 125
Query: 197 QAIGQVLYL---RPYVNDF---STDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTS 248
Q +G + L R + + W +T+LTL G+AF ++GE++S+ +GNG S
Sbjct: 126 QGLGIAVGLESMRGPAGELVVPTPGWSFRLMTVLTLTAGTAFIMWLGEQMSERGIGNGIS 185
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINY 307
L+IF I+ +P + G T + + I++F+ V+ GIV+V+ +R++PI+Y
Sbjct: 186 LIIFAGIVVRIPTALGNTWKLLGAGQLSLFVILFIVAFMFAVIAGIVFVERGQRRLPIHY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
A R T +S++LP KVN +GV+P IF++S + P T+A F + ++ A +L P
Sbjct: 246 AKRVTGLKTYNAQSSHLPLKVNMAGVIPPIFASSIIMFPATIANFINVPWVQNIAKSLMP 305
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y + I FF Y+YT + +P DV+E +K+ G IP +RPGK T+ F+ +VL++
Sbjct: 306 GHWAYNVFFVAFIVFFCYFYTAVTFNPVDVAENIKKHGGYIPGIRPGKETSDFMDSVLTK 365
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ G+++++++ P+++ +L + F GT +LI +G DT ++++ +I++ Y+
Sbjct: 366 LTFAGAIYISVVCVLPSILIGKFNLPFY--FGGTGLLIAIGVGMDTVSQIESHLITRSYE 423
>gi|260549820|ref|ZP_05824036.1| secretion protein [Acinetobacter sp. RUH2624]
gi|425741860|ref|ZP_18859991.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-487]
gi|260407070|gb|EEX00547.1| secretion protein [Acinetobacter sp. RUH2624]
gi|425489720|gb|EKU56022.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-487]
Length = 452
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
ST + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 152 TLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|374263378|ref|ZP_09621926.1| preprotein translocase subunit SecY [Legionella drancourtii LLAP12]
gi|363535968|gb|EHL29414.1| preprotein translocase subunit SecY [Legionella drancourtii LLAP12]
Length = 442
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 248/399 (62%), Gaps = 14/399 (3%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
RLG +IP+ G++ R A N QN++ + FSGG + R+ + ++GI+P+I+A I+ Q
Sbjct: 33 RLGAHIPVPGLDPARLANFFNEQQNTIFGLFNMFSGGALSRVTVFAIGIMPYISASIIIQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L + ++PKL+ L K+EGE+GR+K+ QYTRY ++ +I Q++G +L + D +
Sbjct: 93 LFSVVSPKLEQL-KKEGESGRRKINQYTRYLTLVLSIFQSLGMARWLAGQQIALNPDMSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
T+V L G+ F ++GE+I++ +GNG SL+IF+ I+S +P++ +V + ++G
Sbjct: 152 YFTAVITLVTGTMFLMWLGEQITEKGIGNGISLIIFSGIVSSMPSAIA-SVLQQVKEGQM 210
Query: 277 --IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
+ L + + +++ +V+++ A+R+I +NYA R R ++++LP K+N SGV+
Sbjct: 211 QALTLIIVAVIVVVVTGFVVFMERAQRRIRVNYAQRTQGRKVYAAQTSHLPLKINMSGVI 270
Query: 335 PIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
P IF++S + LP TLA+F G+ L +AL+PG YL + I FF ++Y L
Sbjct: 271 PPIFASSIILLPATLAQFFSHTKGLGWLSDVGMALSPGQPLYLIVYAMAILFFAFFYAAL 330
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
+P D +E LK+ GA IP +RPG+ T ++ V++R++++G+++L ++ P ++ T
Sbjct: 331 VFNPKDTAENLKKSGAYIPGIRPGEQTTKYIDAVMTRLTLIGAIYLVLVCLLPQILMYTW 390
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
H+ + F GTS+LI+V D ++QA +++Q+Y ++
Sbjct: 391 HVPFY--FGGTSLLIIVVVIMDFVAQIQAHLMTQQYDSL 427
>gi|424057932|ref|ZP_17795449.1| preprotein translocase, SecY subunit [Acinetobacter nosocomialis
Ab22222]
gi|407439962|gb|EKF46483.1| preprotein translocase, SecY subunit [Acinetobacter nosocomialis
Ab22222]
Length = 450
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 31 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 90
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 91 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 149
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
ST + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 150 TLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 209
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 210 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 266
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 267 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 326
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 327 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 386
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 387 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 437
>gi|436842964|ref|YP_007327342.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171870|emb|CCO25243.1| preprotein translocase subunit [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 436
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 237/405 (58%), Gaps = 16/405 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ R+GI+IP+ GV+ A + N+L D FSGGG+ L I +LGI+P+I+A
Sbjct: 26 LAVYRIGIHIPVPGVDSAALADFFESVSNTLFGLFDMFSGGGLRNLSIFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND--- 211
I+ QLL ++P+L+ L + EG GRKK+ QYTRYA+V IVQ G + L +
Sbjct: 86 IIIQLLNVVSPELKRLSQ-EGAQGRKKITQYTRYATVAITIVQGFGIAMGLESMTSPTGA 144
Query: 212 ---FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
W +T+LTL G+ F ++GE++++ +GNG S++IF I++ LP++ T
Sbjct: 145 PVVLHAGWTFRLITILTLTAGTVFLMWLGEQMTEKGIGNGISMIIFAGIVAGLPSAIFNT 204
Query: 267 VAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
V Q G L ++ I ++ IV+++ +R+IPI+YA R R ++ +L
Sbjct: 205 V-RLMQAGEITLFLLLFVLAFMIAILAFIVFMERGQRRIPIHYAKRMMGRKMMGGQTTHL 263
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P ++N++GV+P IF++S L P TLA F+ L K + NP Y I LI FF
Sbjct: 264 PLRINTAGVIPPIFASSILMFPATLASFSDNEILSKVSAYFNPDAVIYNVIFIALIIFFC 323
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + DP ++E +++QG IP +RPG T ++ VL+RI++ GS+++A + P
Sbjct: 324 YFYTAIIFDPKGIAENIQKQGGFIPGIRPGAKTREYIDRVLARITLWGSLYVAAICVLPM 383
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
V+ ++ + F GT++LI+VG A D K+++ +IS++Y +
Sbjct: 384 VLISQFNVPFY--FGGTALLIVVGVAMDFMGKIESYMISRQYDGL 426
>gi|73661992|ref|YP_300773.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494507|dbj|BAE17828.1| preprotein translocase SecY subunit [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 430
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 243/421 (57%), Gaps = 15/421 (3%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
FFK + K L L + ++G YIP GVN AF + L++F GG +
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDSQQGSQGVTDLLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +G+AGRKK+ TRY ++ A +Q
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGDAGRKKLNNVTRYFAIVLAFIQ 125
Query: 198 AIGQVLYLRPY-----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG Y + D S L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMAFQFNNYLKGQLIMDQSILSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINY 307
I+S LP+S + +AF QD ++ + +II ILL +G +YV +A RKIPI Y
Sbjct: 186 AGILSSLPSSLIQFYQQAFVGQDDTSMAWLKVIALIIGMILLTVGAIYVLQAIRKIPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALN 366
A + +++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A+ +K + N
Sbjct: 246 AKKQSAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPDASWAQKVSDVAN 304
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P + + ++LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 305 PSNNIGMIVYVVLIIAFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITRVLY 364
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A++ + Y
Sbjct: 365 RLTFVGSIFLAVIAILPIIATKVMSLPQSIQVGGTSLLIVIGVAIETMKSLEAQVSQKDY 424
Query: 487 K 487
+
Sbjct: 425 R 425
>gi|254362777|ref|ZP_04978859.1| preprotein translocase subunit SecY [Mannheimia haemolytica PHL213]
gi|452744240|ref|ZP_21944088.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype 6 str. H23]
gi|153094406|gb|EDN75255.1| preprotein translocase subunit SecY [Mannheimia haemolytica PHL213]
gi|452087736|gb|EME04111.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype 6 str. H23]
Length = 439
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 251/417 (60%), Gaps = 14/417 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELIRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRY ++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYGTLLLAFIQSIGI 134
Query: 202 VLYLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L L V+ S + +TSV L G+ F ++GE+I++ +GNG SL+IFT I++
Sbjct: 135 SLALPNMVHGLVPNPSILFYVTSVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVA 194
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ G+T+ +A Q + ++I L + I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQGELSFIVLLLVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMM 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFY 372
R+++LP KVN +GV+P IF++S + P ++ ++ G L + L PG Y
Sbjct: 255 APARTSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLY 314
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++G
Sbjct: 315 VVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIG 374
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++A + P +I + G GTS+LI+V D +VQ+ ++SQ+Y ++
Sbjct: 375 ALYIAFVCLVPYIITSLWKVPFQLG--GTSLLIVVVVIMDFIAQVQSHLMSQQYDSV 429
>gi|403251563|ref|ZP_10917896.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
gi|402915108|gb|EJX36098.1| preprotein translocase subunit SecY [actinobacterium SCGC
AAA027-L06]
Length = 432
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 246/428 (57%), Gaps = 23/428 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGV---NREAFVGNLDQNSLLSTLDSFS 133
FG FK P L K L +AL RLG IP GV N + + + L ++ FS
Sbjct: 6 FGKAFKTPDLRKKIFFTLSIMALFRLGSVIPTPGVSYVNVQECLATANTGGLFGLINLFS 65
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L + +LGI+P+I + I+ QLL + P+ + L K+EG+AG K+ QYTRY ++G
Sbjct: 66 GGALLQLSVFALGIMPYITSSIIVQLLTVVIPRFETL-KKEGQAGTAKLTQYTRYLTIGL 124
Query: 194 AIVQAIGQVLYLR-----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
AI+Q+ G + R P + D S ++T + ++T G++ ++GE I+D
Sbjct: 125 AILQSTGLIAVARITGRIFPNCSLPIIPDTSWQRIITMIAVMTAGTSVIMWLGELITDRG 184
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERK 302
+GNG S+LIFTSI + P G+ + Q G + L + + +L+V +V+V++A+R+
Sbjct: 185 VGNGMSILIFTSIAASFP---GQLWSIKLQKGWFAFLFIMAVG-VLIVAAVVFVEQAQRR 240
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA 362
IP+ YA R R S Y+P KVN SGV+P+IF++S L +P + F+G A
Sbjct: 241 IPVQYAKRQVGRQQYGGTSTYIPIKVNQSGVIPVIFASSLLYIPSLIVNFSGSQAAWATW 300
Query: 363 VALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA 419
++ N FY+ LLI FF Y+Y + +PD+VS+ +K+ G IP +R GK T+
Sbjct: 301 ISKNLVSGDNFFYIGVYALLIVFFTYFYVAITFNPDEVSDNMKKYGGFIPGIRAGKPTSE 360
Query: 420 FLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQA 479
+L+ VLSRI+ G+++L+I+A P + + F GT++LI+VG DTA+++++
Sbjct: 361 YLQYVLSRITAPGALYLSIVAIIPFIALILFQASQNFPFGGTAILIVVGVGLDTAKQIES 420
Query: 480 EIISQKYK 487
++ + Y+
Sbjct: 421 QLQQRSYE 428
>gi|77461280|ref|YP_350787.1| preprotein translocase subunit SecY [Pseudomonas fluorescens Pf0-1]
gi|398852135|ref|ZP_10608804.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM80]
gi|398874822|ref|ZP_10630022.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM74]
gi|398878868|ref|ZP_10633973.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM67]
gi|398884980|ref|ZP_10639903.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM60]
gi|398891102|ref|ZP_10644542.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM55]
gi|398910802|ref|ZP_10655218.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM49]
gi|398925574|ref|ZP_10661948.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM48]
gi|398935307|ref|ZP_10666395.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM41(2012)]
gi|398948385|ref|ZP_10672773.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM33]
gi|398977384|ref|ZP_10687101.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM25]
gi|398990509|ref|ZP_10693691.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM24]
gi|398999065|ref|ZP_10701818.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM18]
gi|399015935|ref|ZP_10718186.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM16]
gi|424925183|ref|ZP_18348544.1| SecY [Pseudomonas fluorescens R124]
gi|77385283|gb|ABA76796.1| preprotein translocase SecY subunit [Pseudomonas fluorescens Pf0-1]
gi|398106811|gb|EJL96827.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM16]
gi|398132684|gb|EJM21946.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM18]
gi|398138128|gb|EJM27158.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM25]
gi|398144111|gb|EJM32971.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM24]
gi|398160779|gb|EJM49037.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM33]
gi|398169793|gb|EJM57763.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM41(2012)]
gi|398171935|gb|EJM59823.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM48]
gi|398185143|gb|EJM72560.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM49]
gi|398187337|gb|EJM74681.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM55]
gi|398193260|gb|EJM80370.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM60]
gi|398194045|gb|EJM81130.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM74]
gi|398197987|gb|EJM84955.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM67]
gi|398245011|gb|EJN30543.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM80]
gi|404306343|gb|EJZ60305.1| SecY [Pseudomonas fluorescens R124]
Length = 442
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 257/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF+ I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|310821014|ref|YP_003953372.1| preprotein translocase subunitSecY [Stigmatella aurantiaca DW4/3-1]
gi|309394086|gb|ADO71545.1| Preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 448
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 242/414 (58%), Gaps = 32/414 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFIN 152
LA+ R+GI+I GV+R A +D L+S + FSGG + ++ I LGI+P+++
Sbjct: 26 LAVYRIGIFINTPGVDRAAMNAFMDAQKQSGGLVSLFNLFSGGALEQMSIFGLGIMPYVS 85
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL------- 205
A I+ QLLA + P L+ LQK EG +GR+K+ QYTRY S+ ++VQ IG +L
Sbjct: 86 ASIIMQLLAVVVPSLERLQK-EGASGRQKINQYTRYGSIVLSVVQGIGISRWLASLGRSD 144
Query: 206 -------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ V D S + +V LT G+AF ++GERI++ +GNG SL+IF I++
Sbjct: 145 AGQSGFNQIVVPDDSAWFTFMTVISLTAGTAFIMWLGERITERGIGNGISLIIFAGIVAG 204
Query: 259 LPASFGRTVAE-----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
L + G+T+ + A + +GLA ++ FI+ V +VYV+ R+IP+ YA R
Sbjct: 205 LLPN-GKTLLDMTAQGAIEAAALVGLAVFML-FIIAV--VVYVERGMRRIPVQYAKRMAG 260
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ Y P KVN+SGV+P IF+ + L+ P TL + + + NP Y
Sbjct: 261 RRMFAGQATYFPMKVNTSGVIPPIFAGALLSFPATLGTWFPFLQTFRQGLEGNP--WLYN 318
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+LL+ FF Y+YT L PDDV++ +K+QG IP +RPG+ TA F++ VL+RI+ G+
Sbjct: 319 GLFVLLVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQTADFIERVLNRITFGGA 378
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++LA + P ++ Q + F GT++LI+VG A DT ++++ +IS+ Y+
Sbjct: 379 IYLATICVIPTILTQWLQVPF--AFGGTALLIVVGVALDTVQQIEGHLISRNYE 430
>gi|378953163|ref|YP_005210651.1| SecY protein [Pseudomonas fluorescens F113]
gi|359763177|gb|AEV65256.1| SecY [Pseudomonas fluorescens F113]
Length = 428
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 257/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 12 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 67
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL++ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQA+G + L
Sbjct: 68 MPYISASIIMQLMSAVSPQLEQL-KKEGEAGRRKISQYTRYLTVVLALVQAVGMSIGLAG 126
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +VT G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 127 QGVAFTGDFGFHFV--AVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 184
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 185 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 244
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 245 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 300
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 301 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 360
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 361 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 418
Query: 494 IDSYGS 499
+ YGS
Sbjct: 419 LKGYGS 424
>gi|398838629|ref|ZP_10595903.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM102]
gi|398901727|ref|ZP_10650518.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM50]
gi|407368348|ref|ZP_11114880.1| preprotein translocase subunit SecY [Pseudomonas mandelii JR-1]
gi|398115500|gb|EJM05282.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM102]
gi|398179338|gb|EJM66950.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM50]
Length = 442
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKIAQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|398967336|ref|ZP_10681862.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM30]
gi|398144892|gb|EJM33704.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM30]
Length = 442
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 257/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF+ I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGLGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|320335503|ref|YP_004172214.1| preprotein translocase subunit SecY [Deinococcus maricopensis DSM
21211]
gi|319756792|gb|ADV68549.1| preprotein translocase, SecY subunit [Deinococcus maricopensis DSM
21211]
Length = 435
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 244/426 (57%), Gaps = 25/426 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS---LLSTLDSFS 133
F D F+ P L K L L L + RLG IP GVN A L+Q + L + S
Sbjct: 5 FRDAFRIPDLQRKILFTLLLLGVYRLGNAIPTPGVNVSA----LEQTTNGGLFGLISLIS 60
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + + I +LG++P+I A IV QLL P L+ L K EGE GRKK+ QYTRYA++G
Sbjct: 61 GGNLSQFSIFALGVLPYITASIVIQLLTSTIPFLEKLSK-EGEEGRKKITQYTRYAAIGL 119
Query: 194 AIVQAIGQVLYLRPYVND---FSTDWVLTSVTLLTL------GSAFTTYIGERISDLKLG 244
VQA+ L VND S W + T++ + G AFT ++GERI+++ +G
Sbjct: 120 GTVQAL--FFVLAGIVNDPAKLSPGWGQDAFTVVVMVLTQVAGIAFTMWLGERITEVGIG 177
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKI 303
NG SL+I I++ P T +D + +G+ I+ ++++ GIV+VQ+ ER++
Sbjct: 178 NGISLIIMAGIVARYPVDISLTGQLLAKDQVSLLGIVAFIVILLVVLAGIVFVQQGERRV 237
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
P+ YA + ++ YLP KVN +GV+P+IF+ + L LP + + T A + A
Sbjct: 238 PVQYARKQVGNRQVGGQATYLPIKVNQAGVIPVIFAGAMLILPNLIQQATTTRAPQVADF 297
Query: 364 A---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF 420
L+ G YL +LLI F Y Y +Q DP +SEQL+ G IP VRPG +TA +
Sbjct: 298 IGKYLSFGSPLYLALEVLLIFGFTYLYNSVQFDPKRISEQLRESGGFIPGVRPGTATAEY 357
Query: 421 LKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAE 480
L + SRIS+ G++FLA+L P ++++ T +T F+ +GT +LI+VG A DT ++++++
Sbjct: 358 LGRISSRISLWGAIFLAVLTILPQIVQKATGITTFQ-LSGTGLLIVVGVALDTLKQLESQ 416
Query: 481 IISQKY 486
+ ++Y
Sbjct: 417 LTVRRY 422
>gi|89093595|ref|ZP_01166543.1| preprotein translocase, SecY subunit [Neptuniibacter caesariensis]
gi|89082285|gb|EAR61509.1| preprotein translocase, SecY subunit [Oceanospirillum sp. MED92]
Length = 439
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 249/415 (60%), Gaps = 12/415 (2%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +L + + R+G +IP+ G+N + DQN ++LS + FSGG + R+
Sbjct: 16 GELKSRLLFVLLAIVVYRIGAHIPVPGINPDRLAAMFDQNQGTILSLFNMFSGGALERMS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QL+ ++P L L K+EGEAGR+K+ QYTRY +V A +Q+ G
Sbjct: 76 ILALGIMPYISASIIMQLMTVVSPTLAQL-KKEGEAGRRKINQYTRYGTVLLATIQSFGM 134
Query: 202 VLYLRPYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+ L FS D + +V L G+ F ++GE++++ +GNG S+LIF I++ L
Sbjct: 135 AVGLANQGIAFSADISFYFVAVVTLVAGAVFLMWLGEQVTERGIGNGISILIFAGIVAGL 194
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+ A Q D N + L I + I V +V+++ +R+I INYA R
Sbjct: 195 PSAIGQAFEAARQGDLNILALLAIAVLAIATVGFVVFMERGQRRITINYAKRQQGNRVFA 254
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLP 374
+S++LP KVN +GV+P IF++S L P ++ ++ G+ L+ A+AL PG Y+
Sbjct: 255 AQSSHLPLKVNMAGVIPPIFASSILLFPASMGQWFGNSEGMDWLQNVALALGPGQPLYIL 314
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF Y+YT + +P DV++ LK+ GA IP +RPG+ +A ++ TVL R+++ G++
Sbjct: 315 LFSIAIIFFCYFYTAIVFNPKDVADNLKKSGAFIPGIRPGEQSARYIDTVLGRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ P + ++ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 375 YITAVSLMPQFMVVAANVPFY--FGGTSLLIVVVVVMDFMAQVQSHLMSHQYESL 427
>gi|139438870|ref|ZP_01772330.1| Hypothetical protein COLAER_01334 [Collinsella aerofaciens ATCC
25986]
gi|133775581|gb|EBA39401.1| preprotein translocase, SecY subunit [Collinsella aerofaciens ATCC
25986]
Length = 405
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 252/418 (60%), Gaps = 33/418 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVG--NLDQNSL----LSTLDSFSGGGIGRLGICSLGIVPF 150
L + R+G ++P+ G+ + +G + D NS+ ++ L+ FSGG + + + SLGI+P+
Sbjct: 2 LVVYRIGAHVPVPGIPFQGMLGLFSTDNNSVAAGAMALLNLFSGGALSYVSVFSLGIMPY 61
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I + I+ Q+L + P L +L REGE G+ K+ QY+RY ++ AI+ ++G + + +
Sbjct: 62 ITSSIILQMLQAVVPSLHEL-AREGEVGQTKITQYSRYLTLALAILNSVGYLFLFKSFGI 120
Query: 211 DFS------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP-ASF 263
F+ + L V LT G+ +IGE I+ +GNG SL+IF +I++ LP A F
Sbjct: 121 SFNGAGAPEIIFDLMIVGTLTAGAMLIMWIGELITQRGIGNGMSLIIFANIMAGLPQAIF 180
Query: 264 GRTVAEAFQDGNYIGLATIII--SFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQR 320
T +GN G+ T++I + ILLV+ IV+++ +R+IP++YA R R +
Sbjct: 181 SST------EGNAGGIITMVIICAIILLVIPLIVFLERGQRRIPVSYAKRVVGRRMMGGQ 234
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILL 379
+ YLP KVN++GV+PIIF+++ L P +A F GI ++ A AL+ G ++ N++L
Sbjct: 235 TTYLPIKVNTAGVVPIIFASALLYFPAQIAVFFPGIGWIQAVASALSTGWLNWV-LNVVL 293
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF Y+YT + +PDD ++ LK+QG IP VRPG++TAA++K L++I++ +VFLA++
Sbjct: 294 IVFFAYFYTSMVFNPDDTADNLKKQGGFIPGVRPGRATAAYIKNALNKITLPSAVFLALI 353
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDSY 497
A P++I T + F GTS+LI+VG DT K++ + I+ YD D +
Sbjct: 354 AIVPSIIFSFTGNHLIQAFGGTSILIMVGVVLDTVDKLEGQ--------IKMYDYDGF 403
>gi|167036820|ref|YP_001664398.1| preprotein translocase subunit SecY [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039539|ref|YP_001662524.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X514]
gi|256752651|ref|ZP_05493503.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300915210|ref|ZP_07132525.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307725134|ref|YP_003904885.1| preprotein translocase subunit SecY [Thermoanaerobacter sp. X513]
gi|320115242|ref|YP_004185401.1| preprotein translocase subunit SecY [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853779|gb|ABY92188.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X514]
gi|166855654|gb|ABY94062.1| preprotein translocase, SecY subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256748471|gb|EEU61523.1| preprotein translocase, SecY subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300888934|gb|EFK84081.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X561]
gi|307582195|gb|ADN55594.1| preprotein translocase, SecY subunit [Thermoanaerobacter sp. X513]
gi|319928333|gb|ADV79018.1| preprotein translocase, SecY subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 418
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 235/403 (58%), Gaps = 9/403 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L LG L + R+G +IP+ G++ + L Q L D SGG I ++ I
Sbjct: 17 RILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDIISGGAFSNFTIFAMSIT 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL P L+ L K EGE GRKK+ QYTRY +V A++QAIG + L+
Sbjct: 77 PYINASIIMQLLTIAIPSLEQLAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKSA 135
Query: 209 VNDFSTDWVLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
V + T + LT + + LT G+AF ++GE+I++ +GNG+SL+IF IIS +P T
Sbjct: 136 VIN-PTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFAGIISRIPNMIYLT- 193
Query: 268 AEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
++ Q G N G +++ +++++ I+ E +R+IP+ YA R R +S ++P
Sbjct: 194 SQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVVGRKVYGGQSTHIP 253
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFN 384
++N +GV+PIIF+ S L P LA F ++ L+ G Y +ILLI F
Sbjct: 254 IRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFT 313
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + +P DVS+ LK+ G IP +RPGK T FL VL+R++ +G++FLA +A P
Sbjct: 314 YFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFVGALFLAFIATMPV 373
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ T L + F GT++LI VG A DT ++++ +I + Y+
Sbjct: 374 ILMNITGLQLY--FGGTALLIAVGVALDTMKQIEGHLIMRNYQ 414
>gi|445432096|ref|ZP_21439001.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
gi|444759156|gb|ELW83639.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC021]
Length = 440
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 21 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 80
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 81 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 139
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
ST + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 140 TLSTGLAFYIPAVTSLIAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 199
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 200 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 256
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 257 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 316
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 317 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 376
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 377 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|83648832|ref|YP_437267.1| preprotein translocase subunit SecY [Hahella chejuensis KCTC 2396]
gi|83636875|gb|ABC32842.1| Preprotein translocase subunit SecY [Hahella chejuensis KCTC 2396]
Length = 443
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 251/409 (61%), Gaps = 13/409 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RVGAHIPVPGINPDRLAALFDQNQGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST--DW 216
LL ++P+L+ L K+EGEAGR+K+ QYTRY +V A +QA G + L F+T +
Sbjct: 93 LLTVVSPQLEQL-KKEGEAGRRKISQYTRYGTVLLATIQAFGISVGLANQGVTFTTGPSF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA-FQDGN 275
+V G+ F ++GE+I++ +GNG SLLIF I++ LP + G+T +A + +
Sbjct: 152 FFVAVVTFVCGAVFLMWVGEQITERGIGNGISLLIFAGIVAGLPGAVGQTFEQARLGEMS 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L + + + ++ +V+++ +R+I INYA R R Q+S++LP KVN +GV+P
Sbjct: 212 VLTLIAVAVFAVAIIAFVVFMERGQRRITINYARRQQGRKVYAQQSSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF++S L P +L ++ G+ L+ + AL P Y+ + + FF ++YT L
Sbjct: 272 PIFASSILLFPASLGQWFGKGEGMEWLQVVSQALGPSQPLYIILFAIAVVFFCFFYTALM 331
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
+P +V++ LKR GA +P +RPG++TA ++ VL+R++V G++++A +A P + + +
Sbjct: 332 YNPKEVADNLKRSGAFVPGIRPGENTAKYIDGVLTRLTVFGALYIAAVALLPQFLVVSWN 391
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
+ + F GTS+LI+V D +VQ+ ++S +Y ++ + ++ +YG
Sbjct: 392 VPFY--FGGTSLLIVVVVVMDFMAQVQSHLMSHQYDSLMKKSNLKNYGK 438
>gi|410464323|ref|ZP_11317769.1| preprotein translocase, SecY subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982574|gb|EKO39017.1| preprotein translocase, SecY subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 437
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 244/416 (58%), Gaps = 15/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L +A+ R+G+++P+ GV+ A + +N+L D FSGGG+ L I
Sbjct: 15 LKKKLLWTFLLVAVYRIGVHVPVPGVDSAALADFFESAKNTLFGLFDMFSGGGLRNLSIF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P+L +QK +G AG+KK+ QYTRY +V +Q G +
Sbjct: 75 ALGIMPYISASIIIQLLTVVSPELAKMQKEDGAAGKKKITQYTRYGTVLITCIQGFGIAV 134
Query: 204 YLRPYVND------FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L + W +T++TL G+ F ++GE++++ +GNG SL+I++ I
Sbjct: 135 GLESMASPTGAPVVLMPGWGFRLMTIITLCAGTVFLMWLGEQLTEKGIGNGISLIIYSGI 194
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTS 313
++ LP + T + + G L I+I ++L ++ IV+++ +R+IPI YA R
Sbjct: 195 VAGLPRAVLSTF-DLLKAGELSPLMLILIVALMLAVLVAIVFMERGQRRIPIQYAKRMVG 253
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ +LP +VN++GV+P IF++S L P TL F+ + LK A +P Y
Sbjct: 254 RKMYGGQTTHLPLRVNTAGVIPPIFASSILLFPATLGEFSSVPWLKTVASFFSPQTMTYN 313
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I LI FF Y+YT + DP D++E +++QG IP +RPG T ++ VL RI++ GS
Sbjct: 314 VIFIALIVFFCYFYTAIIFDPADIAENIRKQGGFIPGIRPGAKTKEYIDKVLVRITLWGS 373
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P ++ Q ++ + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 374 MYISAVCVLPMMLIQQFNVPFY--FGGTSLLIVVGVAMDFMSQIESYLISRQYEGL 427
>gi|398860782|ref|ZP_10616426.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM79]
gi|398234222|gb|EJN20105.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM79]
Length = 442
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKIAQYTRYGTVVLALVQAIGMSIGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVSFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|345303858|ref|YP_004825760.1| preprotein translocase subunit SecY [Rhodothermus marinus
SG0.5JP17-172]
gi|345113091|gb|AEN73923.1| preprotein translocase, SecY subunit [Rhodothermus marinus
SG0.5JP17-172]
Length = 438
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 246/420 (58%), Gaps = 33/420 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV--------NREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
+ L LG L + RLG Y+ L GV NR+A N+L +D F GG +
Sbjct: 20 RVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQA-----GTNNLFGLIDLFVGGAFSQA 74
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
GI +LGI+P+I A I+ QL+ + P Q LQ REGE GR+K+ Q TRY +VG +QA+G
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQ-REGEEGRRKITQLTRYLTVGITALQAVG 133
Query: 201 QVLYLR-----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+ LR + ++L +V +LT G+ F ++GERI++ +GNG SL+I SI
Sbjct: 134 YAINLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 256 ISYLPASFGRTVAEAF--QDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++LP + V F +D +I L + + F+++ G+V V + R+IP+ YA R
Sbjct: 194 IAFLP----QAVYNEFTLKDNLFIVLLELAV-FVVITAGVVLVTQGTRRIPVQYAKRVVG 248
Query: 314 RS--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKK-AAVALNPGG 369
R GG+ + YLP +VN++GVMPIIF+ S + +P T+A F G +++ + + G
Sbjct: 249 RRVYGGV--TQYLPLRVNAAGVMPIIFAQSIMFVPATIATFFPGSDFMQQFGSFFSDISG 306
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y LL+ FF Y+YT + ++P ++++ LKRQG IP VRPGK T+ F+ T+L+RI+
Sbjct: 307 WGYSSLFFLLVVFFTYFYTAIAVNPREMADTLKRQGGFIPGVRPGKQTSEFIDTILTRIT 366
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAF-RGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ G++FL I+A PA + F F GTS+LI+VG DT +++++ ++ + Y+
Sbjct: 367 LPGAIFLGIVAIIPAFAMRAGVTAGFAHFFGGTSLLIIVGVMLDTLQQIESHLLMRHYEG 426
>gi|326793578|ref|YP_004311398.1| preprotein translocase subunit SecY [Marinomonas mediterranea
MMB-1]
gi|326544342|gb|ADZ89562.1| preprotein translocase, SecY subunit [Marinomonas mediterranea
MMB-1]
Length = 443
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 250/409 (61%), Gaps = 16/409 (3%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLSALFDQNEGTILSLFNVFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QLL ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQ+ + L
Sbjct: 82 LPYISASIIMQLLTVVSPQLEQL-KKEGEAGRRKITQYTRYGTVLLALVQSASMAVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS+ +V ++TL G+ F ++GE++++ +GNG S+LIF I++ LP++ G+
Sbjct: 141 QGISFSSGIEFYAVAVVTLVAGTVFLMWLGEQVTEKGIGNGISILIFAGIVAGLPSALGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N + L I + I V +V+++ +R+I +NYA R + + ++L
Sbjct: 201 SFESARQGDINILALLLIGVLAIATVAFVVFIERGQRRITVNYAKRQQGKKVFAAQKSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLI 380
P KVN +GV+P IF++S L P ++ ++ G+ L+ ++AL PG Y+ + I
Sbjct: 261 PLKVNMAGVIPPIFASSILLFPASIGQWFGQGEGMEWLQNVSLALAPGQPLYVLLFAIAI 320
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF ++YT L +P DV++ LK+ GA +P +RPG TA ++ V++R+++ G++++ +++
Sbjct: 321 VFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGDHTARYIDGVMTRLTLFGALYITLVS 380
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 381 LMPQFFVVLWNVPFY--FGGTSMLIVVVVVMDFMSQVQSHLMSHQYESL 427
>gi|262066284|ref|ZP_06025896.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
gi|291379979|gb|EFE87497.1| preprotein translocase, SecY subunit [Fusobacterium periodonticum
ATCC 33693]
Length = 426
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 240/395 (60%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + ++ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLASMASKSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ V + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGAGVCLWLQSVGLVYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +TV + D
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISIKGIGNGVSLIIFLNVISRAPSSVIQTVQKMQGDKFL 211
Query: 277 IGLATIIISFILLV--LGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
I L ++++F+ V GIV Q +RKIPI+Y + S G+ +++P ++N++GVM
Sbjct: 212 IPLF-VLVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSSKSGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + + ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSDLQLKTTLSIVFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E L++ G +IP +RPG+ T +L+ V SRI+ G +FLA+++ P VI + L
Sbjct: 331 DPEKVAENLRQSGGTIPGIRPGEETVEYLEGVASRITWGGGLFLAVISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|390959492|ref|YP_006423249.1| protein translocase subunit secY/sec61 alpha [Terriglobus roseus
DSM 18391]
gi|390414410|gb|AFL89914.1| protein translocase subunit secY/sec61 alpha [Terriglobus roseus
DSM 18391]
Length = 465
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 250/445 (56%), Gaps = 40/445 (8%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGG 136
+ F+ P L + L LG LA+ RLG +IP G+N E QN S L +D F+GG
Sbjct: 7 NIFRIPELRTRVLFTLGLLAVYRLGGHIPTPGINAELLAQYFSQNAGSSLGLVDLFTGGS 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ RL I +LG++P+I A I+FQLL I L LQK EGE GR+K+ Q+TRY +V AIV
Sbjct: 67 LRRLTIFALGVMPYITASIIFQLLTVIYEPLAKLQK-EGEVGRRKITQWTRYVTVLLAIV 125
Query: 197 QAIGQVLYLR------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
Q+ L L P V S ++ V LT G+AF ++GE+I++ +GNG SLL
Sbjct: 126 QSFAIALTLTKSQTGAPMVTMGSGKFIALCVLTLTTGTAFIMWLGEQITERGIGNGMSLL 185
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLA-----TIIISFILLVLGIVYVQEAERKIPI 305
IFT I++ LP + E +DG + G +I + I +V IV+V+ +ER+IP+
Sbjct: 186 IFTGIVAGLPNGI-NDLYEKARDGAWGGFTPLAIAILIAAMIAVVYFIVFVERSERRIPV 244
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAA 362
YA R R +S +LP KVNS GVMP+IF++S L+ P A + L+ A
Sbjct: 245 QYAKRIVGRKMMGGQSTHLPLKVNSGGVMPVIFASSILSAPLLFANTQFVQNHTFLRVIA 304
Query: 363 VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
L PG +Y ++ I FF Y+Y + PDD+++ L++ G IP +RPG+ T+ F+
Sbjct: 305 DGLKPGEPWYQLLSMAAIIFFAYFYISIVFRPDDIADNLRKYGGFIPGIRPGRRTSDFIN 364
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHL-------TAFRG--------------FAGT 461
+L+RI+++G+++L ++ P ++ HL +AF F GT
Sbjct: 365 DILTRITLVGALYLIVIQLIPQMLISGIHLNHLWLVGSAFDRLPSWITNGLGVNFYFGGT 424
Query: 462 SVLILVGCATDTARKVQAEIISQKY 486
S+LI+VG A DT ++V++++I + Y
Sbjct: 425 SLLIVVGVAMDTVQQVESQLIMRHY 449
>gi|422653851|ref|ZP_16716608.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330966891|gb|EGH67151.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 444
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 254/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGAILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|310779576|ref|YP_003967909.1| protein translocase subunit secY/sec61 alpha [Ilyobacter polytropus
DSM 2926]
gi|309748899|gb|ADO83561.1| protein translocase subunit secY/sec61 alpha [Ilyobacter polytropus
DSM 2926]
Length = 426
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 242/397 (60%), Gaps = 14/397 (3%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G +IP GV+ + QN LL ++ FSGG R+ I +LG++P+INA IV
Sbjct: 33 IARVGTHIPAPGVDIDRLSSMTAQNDLLGYINMFSGGAFQRVSIFALGVMPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDFSTDW 216
LLA I PKL+++QK EGE+GR KV Q+TRY ++ A++Q G ++L+ V +
Sbjct: 93 LLAVIIPKLEEIQK-EGESGRNKVTQWTRYLTIVVAMIQGFGVCMWLQSAGLVTTPGFGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
V T+VT LT G+ F ++GE+IS +GNG SLLIF ++IS +P++ +TV
Sbjct: 152 VTTTVTTLTAGTVFLMWVGEQISLKGVGNGISLLIFLNVISRMPSTVVQTVQNMKGSKFL 211
Query: 277 IGLATIIISFILL-VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
I + I+ +F L+ V GIV +Q +R IP++Y R S GG+ +S YLP K+N++GVMP
Sbjct: 212 IPILVIVAAFALITVAGIVIIQLGQRNIPVHYVGRGFSGKGGVAQSTYLPLKINTAGVMP 271
Query: 336 IIFSTSSLALPGTL-----ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
+IF++ + +P + A G L + +P YL T LI FF+++YT +
Sbjct: 272 VIFASVLMMIPSLIVNSLPADMPGRIMLGRLFTQTHP---VYLITYAALIMFFSFFYTAI 328
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
DP+ V++ LK+ G +IP +RPG+ T +L+ V+++I+ G+ FLA ++ P I +
Sbjct: 329 MFDPEKVADNLKQGGGTIPGIRPGEETVVYLENVVTKITWGGAAFLATVSVLPIAIFSSM 388
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
L F F GT ++I+VG A DT +++ A ++ ++YK
Sbjct: 389 GLPVF--FGGTGIIIVVGVALDTVQQINAHLVMKEYK 423
>gi|71065079|ref|YP_263806.1| preprotein translocase subunit SecY [Psychrobacter arcticus 273-4]
gi|71038064|gb|AAZ18372.1| protein translocase subunit secY/sec61 alpha [Psychrobacter
arcticus 273-4]
Length = 443
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 253/419 (60%), Gaps = 27/419 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L+G L + RLG +IP+ G+N A + + ++N++LS + FSGG + R+ I +LG
Sbjct: 23 RLLFLIGALIVYRLGSHIPVPGINPVNLADLFSRNENTILSMFNLFSGGALERMSIMALG 82
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q+++ + P L+ L K+EGEAGR+K+ +YTR ++ A+VQ++G L
Sbjct: 83 IMPYISASIIVQMMSAVLPSLEAL-KKEGEAGRRKLNKYTRQGTLALALVQSLGMCAGLI 141
Query: 207 PYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
S+ + + +VT L G+ F ++GE+I++ +GNG S+LIF SI++ P
Sbjct: 142 SQNLTLSSGLTFYIPAVTSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVAGTPGMIS 201
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG------IVYVQEAERKIPINYASRYTS-RSGG 317
+++ + Q G +I+ FI +LG IVY++ A+R++P+NYA + R
Sbjct: 202 QSIEQVNQ-----GQMNLIVLFIFALLGVAVTAGIVYIERAQRRVPVNYAQKQQQGRKIY 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGG 369
Q+ ++LP K+N +GV+P IF++S L P +L ++ G + L+ A+ L+PG
Sbjct: 257 AQQQSHLPLKLNMAGVIPAIFASSLLLFPASLGQWVGQSTDPTLTQKILQNMALVLSPGQ 316
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YT L P +V+E LKR GA IP +RPG+ T +L VL+R++
Sbjct: 317 PLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGQQTQRYLDHVLNRLT 376
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V+ Q++ F+ GTS+LI+V D ++QA +++ +Y +
Sbjct: 377 FIGAMYMTVICLMPMVV-QSSFGVPFQ-LGGTSLLIMVVVVMDFISQIQAHLMTHQYHD 433
>gi|357418210|ref|YP_004931230.1| preprotein translocase subunit SecY [Pseudoxanthomonas spadix
BD-a59]
gi|355335788|gb|AER57189.1| preprotein translocase subunit SecY [Pseudoxanthomonas spadix
BD-a59]
Length = 444
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 250/417 (59%), Gaps = 20/417 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G ++P+ GVN +A + + Q S++ + FSGG + R I +L
Sbjct: 19 RLLFVLGALIVYRIGCFVPVPGVNPDAMLALMQQQGGSIVDMFNMFSGGALHRFSIFALN 78
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A IV QL A I P L+ LQK EGE+GR+++ QY+R +V A+VQ L L+
Sbjct: 79 VMPYISASIVIQLGAHIFPALKALQK-EGESGRRRITQYSRIGAVLLAVVQGGSIALALQ 137
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +VLT++ LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 138 NQTAPGGAPVVYMPGAGFVLTAIVALTAGTIFLMWVGEQVTERGVGNGVSLIIFAGIVAG 197
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSG 316
LPA+ +T A DG +A II++ ++ +V+V+ +R+I +NYA R R+
Sbjct: 198 LPAAVIQTFG-AVNDGTMSPIALIIVAVVVFAFTWFVVFVERGQRRITVNYARRQGGRNA 256
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA----ALKKAAVALNPGGSFY 372
+ ++++LP K+N +GV+P IF++S LA P TLA ++G + L++ + AL PG +
Sbjct: 257 YMNQTSFLPLKLNMAGVIPPIFASSILAFPATLAMWSGQSPAALTLQRISQALAPGEPLH 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ +I F ++YT L + + +E LK+ GA IP +RPGK+TA ++ VL+R++ G
Sbjct: 317 MIVFAAMIIGFAFFYTALVFNSQETAENLKKSGALIPGIRPGKATADYVDAVLTRLTAAG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++L + P V+ T L F GTS+LI+V D ++QA ++S +Y+++
Sbjct: 377 ALYLVAVCLLPEVMR--TQLGTSFYFGGTSLLIVVVVVMDFIAQIQAHLMSHQYESL 431
>gi|312880352|ref|ZP_07740152.1| protein translocase subunit secY/sec61 alpha [Aminomonas
paucivorans DSM 12260]
gi|310783643|gb|EFQ24041.1| protein translocase subunit secY/sec61 alpha [Aminomonas
paucivorans DSM 12260]
Length = 430
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/423 (36%), Positives = 251/423 (59%), Gaps = 10/423 (2%)
Query: 71 MEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTL 129
M DS F D F+ P L +FL +L L + RLG +IP G++ EA ++ +L
Sbjct: 1 MIDS---FRDAFRLPDLKRRFLFVLAALFVYRLGAHIPTPGIDPEAMAQLFEKGGVLGFF 57
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
D F+GG + R I +LG+VP+IN+ IV QLL + P L+ +QK +GE GRKK++QYTRY
Sbjct: 58 DLFAGGALRRFSIFALGVVPYINSSIVMQLLVVVVPTLEKMQK-DGEEGRKKIVQYTRYG 116
Query: 190 SVGFAIVQAIGQVLYLRPYVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
+V FA++QA+G ++L + F+ ++ + +T GS ++GE +SD +GNG
Sbjct: 117 TVLFALIQAVGMTVWLGN-LGIFAGGFLDAVVVTVTVTAGSLAVMWLGEIMSDHGIGNGI 175
Query: 248 SLLIFTSIISYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
SLLIF I++ +P + +T + + N + L ++ + ++ G V +QE +RK+P+
Sbjct: 176 SLLIFAGIVARIPEAIIQTFSLVRMGEMNVLVLLLAVLLMVGVIAGCVLLQEGQRKLPVQ 235
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
YA R +S ++P +VN++GV+PIIF++S L P TLA F + K A
Sbjct: 236 YAKRVVGNRVYGGQSTFIPLRVNTAGVIPIIFASSVLLFPYTLAGFFPGSVAKAIQNAFA 295
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P Y+ + LI FF Y+YT + +P++V+ +K+ G I +RPGK T+ +++ V+S
Sbjct: 296 PSSPIYMILYVGLIVFFAYFYTAVVFNPEEVANNMKKYGGFILGIRPGKPTSDYIEKVMS 355
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
RI++ GS+ LA++A P + ++ F F GTSVLI+VG A DT +++ +++ + Y
Sbjct: 356 RITLGGSLALALVAVIPTFMSGLMNINTFY-FGGTSVLIVVGVALDTVHQIEGQLLMRHY 414
Query: 487 KNI 489
I
Sbjct: 415 DGI 417
>gi|237797452|ref|ZP_04585913.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020302|gb|EGI00359.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 444
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 254/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTVVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|255659523|ref|ZP_05404932.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
gi|260848075|gb|EEX68082.1| preprotein translocase, SecY subunit [Mitsuokella multacida DSM
20544]
Length = 418
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 236/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ FK P L K + L A+ R+G +IP+ GV+ A +L LD FSGG
Sbjct: 6 GNIFKIPELRQKIIFTLIMFAIFRMGTHIPVPGVDPTAIEKLFANGNLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ I ++ I P+INA I+ QLL + P L+ K EGE G KK Q TRY +V A +Q
Sbjct: 66 SKFSIFAMSITPYINAAIIIQLLNVVIPTLEQWSK-EGEEGHKKTTQVTRYLTVVLAFLQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKAAILNPNPVNILIIAITLTAGTVFLMWVGEQITAQGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ Q G +Y + + + +V+ +++V+ R+IPI+YA R +
Sbjct: 185 ALPKNLG-TIYHYVQAGTISYFSVFMFGVIALAMVVFVIHVETGFRRIPISYAKRVVGQR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
S+++P KVN +GV+PIIF++S L P T+A+F + +K A L G
Sbjct: 244 AYGGHSSHIPLKVNQAGVIPIIFASSVLMFPVTVAQFIDVPWVKTVASYLEWGKPLQTAL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ LI FF Y+YT + + D+++ LK+ G IP +RPGK TA +L VL+RI++ GSVF
Sbjct: 304 YVGLIIFFTYFYTAVTVKIPDMADNLKKYGGFIPGIRPGKPTADYLDHVLTRITLAGSVF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P +I TH+ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNMIAAATHIEGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 414
>gi|28867874|ref|NP_790493.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato str. DC3000]
gi|66047755|ref|YP_237596.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
syringae B728a]
gi|71737231|ref|YP_276686.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|213969234|ref|ZP_03397372.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato T1]
gi|257483205|ref|ZP_05637246.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|289623829|ref|ZP_06456783.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648922|ref|ZP_06480265.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aesculi str. 2250]
gi|289675508|ref|ZP_06496398.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
syringae FF5]
gi|301381741|ref|ZP_07230159.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato Max13]
gi|302061059|ref|ZP_07252600.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato K40]
gi|302130800|ref|ZP_07256790.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|302189297|ref|ZP_07265970.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
syringae 642]
gi|416018895|ref|ZP_11565808.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
glycinea str. B076]
gi|416021786|ref|ZP_11567077.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422296661|ref|ZP_16384327.1| preprotein translocase subunit SecY [Pseudomonas avellanae BPIC
631]
gi|422584599|ref|ZP_16659704.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422591744|ref|ZP_16666382.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422597978|ref|ZP_16672245.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422640787|ref|ZP_16704213.1| preprotein translocase subunit SecY [Pseudomonas syringae Cit 7]
gi|422648977|ref|ZP_16712091.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|422659563|ref|ZP_16721987.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|422666222|ref|ZP_16726091.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|422672062|ref|ZP_16731427.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aceris str. M302273]
gi|422683097|ref|ZP_16741359.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440723603|ref|ZP_20903965.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP34876]
gi|440726923|ref|ZP_20907166.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP34881]
gi|440742724|ref|ZP_20922047.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP39023]
gi|443642043|ref|ZP_21125893.1| Preprotein translocase secY subunit [Pseudomonas syringae pv.
syringae B64]
gi|28851110|gb|AAO54188.1| preprotein translocase, SecY subunit [Pseudomonas syringae pv.
tomato str. DC3000]
gi|63258462|gb|AAY39558.1| protein translocase subunit secY/sec61 alpha [Pseudomonas syringae
pv. syringae B728a]
gi|71557784|gb|AAZ36995.1| preprotein translocase, SecY subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|213925912|gb|EEB59469.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tomato T1]
gi|298156388|gb|EFH97486.1| preprotein translocase subunit [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322302|gb|EFW78396.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331960|gb|EFW87896.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869411|gb|EGH04120.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330879422|gb|EGH13571.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330953177|gb|EGH53437.1| preprotein translocase subunit SecY [Pseudomonas syringae Cit 7]
gi|330962505|gb|EGH62765.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330969801|gb|EGH69867.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aceris str. M302273]
gi|330976660|gb|EGH76703.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330988262|gb|EGH86365.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331012433|gb|EGH92489.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331018180|gb|EGH98236.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407992139|gb|EKG33828.1| preprotein translocase subunit SecY [Pseudomonas avellanae BPIC
631]
gi|440359380|gb|ELP96692.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP34876]
gi|440364973|gb|ELQ02089.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP34881]
gi|440377028|gb|ELQ13685.1| preprotein translocase subunit SecY [Pseudomonas syringae
BRIP39023]
gi|443282060|gb|ELS41065.1| Preprotein translocase secY subunit [Pseudomonas syringae pv.
syringae B64]
Length = 444
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 254/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|298531065|ref|ZP_07018466.1| preprotein translocase, SecY subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509088|gb|EFI32993.1| preprotein translocase, SecY subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 437
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 240/408 (58%), Gaps = 21/408 (5%)
Query: 97 LALSRLGIYIPLGGVNREA----FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
L + R+G+++PL G++ +A F G +++L D F+GGG+ I +LGI+P+I+
Sbjct: 26 LGVYRIGVHVPLPGIDGQALSEFFAG--AEHTLFGLFDMFAGGGLKNFSIFALGIMPYIS 83
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND- 211
A I+ QLL ++P L +K EGEAGRKK+ Q+TRY +V +VQ +G + L +
Sbjct: 84 ASIIMQLLTVVSPTLSRWKKDEGEAGRKKITQWTRYGTVMITLVQGMGISVGLEQMTSPD 143
Query: 212 -----FSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
W LT+V LT G+ F ++GERI+ LGNG SL+IF I++ P +
Sbjct: 144 GASVVIEGGWAFRLTTVFTLTAGTIFIMWLGERITARGLGNGISLIIFAGIVAGFPGALA 203
Query: 265 RTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
V + F G ++G+ + I + ++L IV+V+ +R++PI+YA R R ++
Sbjct: 204 -NVYQLFTAGELTLFMGIFVLAIV-VGVLLFIVFVERGQRRLPIHYAKRMMGRKMYGGQT 261
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIA 381
++LP K+N+SGV+P IF++S L P T+A F+ L+ A L P Y + LI
Sbjct: 262 SHLPLKLNTSGVIPAIFASSILMFPATIASFSQAGFLEAVANHLQPESLVYNLIFVALII 321
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF ++YT + DP D++E LK+QG IP +RPG T ++ VLSR++ GS++L+++
Sbjct: 322 FFCFFYTAIIFDPKDIAENLKKQGGFIPGIRPGLRTKEYIDAVLSRLTFSGSIYLSLVCV 381
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P + + ++ + G GT++LI+V A DT + Q+ +IS+ Y+ +
Sbjct: 382 LPVFMIREFNVPFYYG--GTALLIVVVVAMDTMSQFQSHLISRHYEGL 427
>gi|399522433|ref|ZP_10763097.1| secY [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109867|emb|CCH39658.1| secY [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 442
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 254/424 (59%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ A VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTLVLAFVQAIGMSVGLAS 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ ++T G+ F ++GE+I++ +GNG S+LIF I++ LP++ G+
Sbjct: 141 QGVAFSGDFGFHFVAITTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPSAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALIAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + A+ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSLLLFPASLGAWFGQSEGLGWLQDISQAIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYI 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYDSLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|310659482|ref|YP_003937203.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
gi|308826260|emb|CBH22298.1| preprotein translocase membrane subunit [[Clostridium] sticklandii]
Length = 424
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 239/401 (59%), Gaps = 15/401 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFINAQI 155
L + R+G IP+ G+N + + Q + +LS D +GG I +L I P+I + I
Sbjct: 25 LVVFRIGTAIPVPGINVDVIKQMISQQAGILSFYDIVAGGAFSNFTIFALSITPYITSSI 84
Query: 156 VFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA--IGQVLYLRPYVNDFS 213
V QLL P L+D+QK GE GRKK+LQYTRY +V A++QA IG + V+D S
Sbjct: 85 VIQLLTVAIPALEDMQK-SGEEGRKKILQYTRYLTVVLALIQATAIGIGFFNSALVSD-S 142
Query: 214 TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD 273
++ V LT G+AF ++GE+I++ +GNG SLLIF I+S +P + +T E +
Sbjct: 143 ILSKISVVLTLTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRIPQATVQTF-ELVKS 201
Query: 274 G--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
G N+I + +I + +++G++ V + RKIP+ YA R R +S ++P KVN +
Sbjct: 202 GELNFIQVGVFLIISVAIIVGVILVLQGVRKIPVQYAKRVVGRKTYGGQSTHIPLKVNQA 261
Query: 332 GVMPIIFSTSSLALPGTLARFTG----IAALKKAAVAL-NPGGSFYLPTNILLIAFFNYY 386
GV+P+IF+ S LA P TL F A + K A NPG Y LL+ FF Y+
Sbjct: 262 GVIPVIFAVSLLAFPQTLGIFIKNPEYQAFVSKWFTASGNPGIYVYTLMEFLLVVFFTYF 321
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
Y + PD+V++ +K IP +RPGKST +L VL+R+++ G+VFLA++A+ P +I
Sbjct: 322 YISITFKPDEVADNMKNSNGFIPGIRPGKSTEEYLARVLNRLTLAGAVFLALIASLPTII 381
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T++ FR F GTS+LI+VG A +T ++++A+++ + Y+
Sbjct: 382 YAATNI-PFR-FGGTSLLIVVGVAIETMKQIEAQMVMRHYQ 420
>gi|422619345|ref|ZP_16688036.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
japonica str. M301072]
gi|330899716|gb|EGH31135.1| preprotein translocase subunit SecY [Pseudomonas syringae pv.
japonica str. M301072]
Length = 444
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 254/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|284042824|ref|YP_003393164.1| preprotein translocase subunit SecY [Conexibacter woesei DSM 14684]
gi|283947045|gb|ADB49789.1| preprotein translocase, SecY subunit [Conexibacter woesei DSM
14684]
Length = 423
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 225/398 (56%), Gaps = 18/398 (4%)
Query: 101 RLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVF 157
RLG +IP G+N EA N +L+ L+ FSGGG+ R+ + +LGI+P++ A I+
Sbjct: 29 RLGSHIPAPGINSEAVEEIQRNFSNGGILNFLNLFSGGGLSRIALFALGIMPYVTASIIL 88
Query: 158 QLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--------V 209
QLL + P L+ LQ REGE G++++ QYTRY +VG A Q+I V R + +
Sbjct: 89 QLLTVVVPSLERLQ-REGEVGQQRITQYTRYLTVGLAFAQSIAYVFLFRSFQQSAGASVI 147
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
+F+ V+ LT G ++GE I+ +GNG SL+I SI+ A F + V
Sbjct: 148 ENFTLAKVMLIAICLTAGCMLVMWMGELITQRGIGNGISLMIMASIV----AGFPQGVRA 203
Query: 270 AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVN 329
+ + + + + ++ IV+VQE +R+IP+ YA R + YLP +VN
Sbjct: 204 WWTSPDPVFKVMMPFLALAIIAAIVFVQEGQRRIPVQYARRVIGQRMTQGGQTYLPLRVN 263
Query: 330 SSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
+GV+P+IF+ S +A P T+ + A +P G YL + I F Y YT
Sbjct: 264 MAGVIPVIFAASIMAFPPTIGQLINSPWANDMANFFSPSGWAYLVGEAVFIILFTYMYTA 323
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
+ +P + ++ LKR G IP VRPG+ TA FL +L+R++ G++FLA++AAGP ++
Sbjct: 324 ITFNPVEQADNLKRYGGFIPGVRPGRPTAEFLDRILARLTFPGAIFLALVAAGPTILINQ 383
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T+ F F GTS+LI++G A DT ++++A+++ + Y+
Sbjct: 384 TNANFF--FGGTSILIVIGVALDTMKQLEAQLMMRNYE 419
>gi|114797687|ref|YP_761509.1| preprotein translocase subunit SecY [Hyphomonas neptunium ATCC
15444]
gi|114737861|gb|ABI75986.1| preprotein translocase, SecY subunit [Hyphomonas neptunium ATCC
15444]
Length = 451
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 254/439 (57%), Gaps = 19/439 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA +++F F K L + L LG L L RLG +IP+ G++ + + S
Sbjct: 4 AAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQSSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L +++ F+GG + R+G+ +L ++P+I A I+ Q++ ++P L+ L K+EGEAGRK++ Q
Sbjct: 64 ILGSMNMFAGGAVERMGVFALNVMPYITASIIIQMMTSVSPSLEKL-KKEGEAGRKQINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLK 242
YTRY ++GFA+VQA L + + W +LT V LT G+ ++GE+I+
Sbjct: 123 YTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTGVVTLTGGTMLLMWMGEQITARG 182
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG-LATIIISFILLVLGIVYVQEAER 301
+GNG SL+IF II+ +P + VA+A IG + I++ I LV+ IV+++ ++R
Sbjct: 183 IGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERSQR 242
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
++ I+Y R ++ + ++LP K+N+SGV+P IF+T+ L LP T F G A
Sbjct: 243 RLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAADTE 302
Query: 362 AVALN-----------PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
A + PG Y+ T +L+AFF ++YT + +P + ++ L++ G IP
Sbjct: 303 ATGMTGVLGWLATNFAPGSWTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFIPG 362
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+RPG +TAA++ VL+R++ +G+++L + P ++ + F GTS+LI+V
Sbjct: 363 IRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRRYFPQIPFY-IGGTSLLIVVSVT 421
Query: 471 TDTARKVQAEIISQKYKNI 489
DT ++Q+ +I+ +Y+ +
Sbjct: 422 MDTVTQIQSHLIAHQYEGM 440
>gi|387122504|ref|YP_006288386.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-TJ]
gi|407934163|ref|YP_006849806.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|421204427|ref|ZP_15661553.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|421535345|ref|ZP_15981606.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
gi|424050879|ref|ZP_17788415.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|424058576|ref|ZP_17796073.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|424062046|ref|ZP_17799533.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|193078465|gb|ABO13458.2| secretion protein [Acinetobacter baumannii ATCC 17978]
gi|385876996|gb|AFI94091.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
MDR-TJ]
gi|398326108|gb|EJN42260.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC12]
gi|404665818|gb|EKB33780.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab33333]
gi|404669632|gb|EKB37525.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab11111]
gi|404674458|gb|EKB42206.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Ab44444]
gi|407902744|gb|AFU39575.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TYTH-1]
gi|409986708|gb|EKO42900.1| preprotein translocase subunit SecY [Acinetobacter baumannii AC30]
Length = 450
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 31 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 90
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 91 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 149
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 150 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 209
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 210 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 266
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 267 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 326
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 327 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 386
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 387 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 437
>gi|451980703|ref|ZP_21929089.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
gi|451762039|emb|CCQ90328.1| Preprotein translocase, membrane subunit SecY [Nitrospina gracilis
3/211]
Length = 438
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 253/423 (59%), Gaps = 17/423 (4%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFS 133
F + F+ P L + LG L + R+G +IP G++ A +Q ++L D FS
Sbjct: 6 SFANIFRIPELKRRVFFTLGVLIVYRIGAHIPTPGIDGAALAEIFEQAKGTILGFFDMFS 65
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + RL I +LGI+P+I+A I+ QLL ++P L L K+EGE G+KK+ QYTRY +V
Sbjct: 66 GGALSRLTIFALGIMPYISASIILQLLTIVSPHLAQL-KKEGEQGQKKITQYTRYGTVLL 124
Query: 194 AIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
+++Q+ G + L P V D ++ + ++ LT G+ F ++GE+IS+ +GN
Sbjct: 125 SVIQSSGMAVGLEAMKSPGGAPIVPDPGWEFRMMTMLTLTAGTVFIMWLGEQISERGIGN 184
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL-VLG-IVYVQEAERKI 303
G SL+IFT I++ LP++ G ++ + G L ++++ +++ V+G IV+ + +R+I
Sbjct: 185 GISLIIFTGIVAGLPSAIGMSL-DLMGTGELSVLIGLLLAVVMMAVVGFIVFTEGGQRRI 243
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
PI YA R R ++++LP KVN+SGV+P IF++S + P T+A+F ++ +
Sbjct: 244 PIQYAKRVVGRKMYGGQTSHLPLKVNTSGVIPPIFASSIIMFPATIAQFIDHPWMQTVSA 303
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
AL PG Y I I FF Y+YT + +P +V++ +K+ G IP +RPG TA ++
Sbjct: 304 ALAPGNLIYSLIFIGAIFFFCYFYTAVIFNPTEVADNMKKHGGFIPGIRPGPKTAEYIDQ 363
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
+LS+++ G+++L+ + P + + ++ + F GTS+LI+VG + DT +++++ ++
Sbjct: 364 ILSKLTFYGAIYLSFICILPDYLIKYLNIPFY--FGGTSLLIVVGVSLDTMQQIESHLVM 421
Query: 484 QKY 486
+ Y
Sbjct: 422 RNY 424
>gi|120553672|ref|YP_958023.1| preprotein translocase subunit SecY [Marinobacter aquaeolei VT8]
gi|387813038|ref|YP_005428519.1| preprotein translocase subunit SecY [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|120323521|gb|ABM17836.1| protein translocase subunit secY/sec61 alpha [Marinobacter
aquaeolei VT8]
gi|381338049|emb|CCG94096.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 440
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 252/412 (61%), Gaps = 22/412 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL LL Y R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLALLVY----RIGAHIPVPGINPDRLAALFDQNQGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQ G + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQGFGISVGLAS 140
Query: 208 ----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ + FS +V +V G+ F ++GE+I++ +GNG SLLIF I++ LP +
Sbjct: 141 QGVTFNDSFSFHFV--AVVSFVCGAVFMMWLGEQITERGIGNGISLLIFAGIVAGLPGAI 198
Query: 264 GRTVAEAFQDGNYIGLATIIISFILL-VLG-IVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T+ +A ++G L + I + + V+G +V+++ +R++ INYA R R Q+S
Sbjct: 199 GQTLEQA-RNGEMSLLVVLGIGVLAIAVVGFVVFMERGQRRLTINYAKRQQGRRVFAQQS 257
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNI 377
++LP KVN +GV+P IF++S L P +L ++ G+ L + AL P Y+
Sbjct: 258 SHLPLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDISQALAPSQPLYIILFA 317
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+ FF Y+YT L +P +V++ LKR GA IP +RPG+ TA ++ VL+R+++ G++++A
Sbjct: 318 AAVIFFCYFYTALMYNPKEVADNLKRSGAFIPGIRPGEQTAKYIDGVLTRLTLFGAMYIA 377
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 378 AVSLFPQFLMVAGNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYESL 427
>gi|414159394|ref|ZP_11415680.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410884396|gb|EKS32222.1| preprotein translocase subunit secY [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 430
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 245/423 (57%), Gaps = 15/423 (3%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F +FFK + K L L + ++G YIP GVN AF + L++F GG
Sbjct: 5 FVNFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFESQQGSQGVTDLLNTFGGGA 64
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ I ++GI+P+I A IV QLL I PK + K +G+ GRKK+ TRY ++ A
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGDVGRKKLNNVTRYFAILLAF 123
Query: 196 VQAIGQVLYLRPYVN-----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
+Q+IG Y+ D S L +LT G+AF ++GE+I+ +GNG S++
Sbjct: 124 IQSIGMAFQFNNYLKGALIVDPSPMSYLLIAIVLTAGTAFLLWLGEQITQYGVGNGISII 183
Query: 251 IFTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPI 305
IF I+S LP+S + +AF + ++ +A ++I ILL +G VYV +A RKIPI
Sbjct: 184 IFAGILSTLPSSLIQFYQQAFVGQSDTTIAWLQVAGLVIGLILLTMGAVYVLQAVRKIPI 243
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVA 364
YA + +++ G + + YLP KVNS+GV+P+IF+ + LP TL F A ++ A
Sbjct: 244 QYAKKQSAQRLG-RNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQIANT 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ V
Sbjct: 303 ANPSSNIGMVIYIILIIAFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEKTKKYITKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++ +
Sbjct: 363 LYRLTFVGSIFLAVIAILPILATKFMNLPQSIQVGGTSLLIVIGVAIETMKSLEAQVNQK 422
Query: 485 KYK 487
+YK
Sbjct: 423 EYK 425
>gi|303247013|ref|ZP_07333289.1| preprotein translocase, SecY subunit [Desulfovibrio fructosovorans
JJ]
gi|302491720|gb|EFL51603.1| preprotein translocase, SecY subunit [Desulfovibrio fructosovorans
JJ]
Length = 436
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 243/419 (57%), Gaps = 21/419 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGIC 143
L K L +A+ R+G+++P+ GV+ A + +N+L D FSGGG+ L I
Sbjct: 15 LKKKLLWTFFLVAVYRIGVHVPVPGVDTTALADFFESAKNTLFGLFDMFSGGGLRNLSIF 74
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I++ I+ QLL ++P+L +QK EG AGRKK+ QYTRY +V I+Q G +
Sbjct: 75 ALGIMPYISSSIIIQLLTVVSPELAKMQKEEGAAGRKKITQYTRYGTVLITIIQGFGIAV 134
Query: 204 YLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L P V + L ++ LT G+ F ++GE ++D +GNG S++I+ I
Sbjct: 135 GLESMASPTGAPVVVMAGWGFRLMTILTLTTGTIFLMWLGELMTDKGIGNGISMIIYAGI 194
Query: 256 ISYLPASFGRTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
++ LP R V F + + L I++ + +++ IV+++ R+IPI YA R
Sbjct: 195 VAGLP----RAVLSTFDLLKAGEISLFVLVFIVVLMLAVLVAIVFMERGTRRIPIQYAKR 250
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS 370
R ++ +LP +VN++GV+P IF++S L P TL F+ + LK A +P
Sbjct: 251 MVGRKMYGGQTTHLPLRVNTAGVIPPIFASSILLFPATLGEFSSVPWLKTVAAFFSPQTI 310
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y + LI FF Y+YT + DP D++E +++QG IP +RPG T F+ VL+RI++
Sbjct: 311 TYNVIFVALIVFFCYFYTAIIFDPADIAENIRKQGGFIPGIRPGAKTKEFIDKVLARITL 370
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS++++++ P V+ Q ++ + F GTS+LI+VG A D ++++ +IS++Y+ +
Sbjct: 371 WGSLYISVVCVLPMVMIQQFNVPFY--FGGTSLLIVVGVAMDFMSQIESYLISRQYEGL 427
>gi|389681852|ref|ZP_10173196.1| preprotein translocase, SecY subunit [Pseudomonas chlororaphis O6]
gi|399006320|ref|ZP_10708847.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM17]
gi|425901860|ref|ZP_18878451.1| preprotein translocase, SecY subunit [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|388554387|gb|EIM17636.1| preprotein translocase, SecY subunit [Pseudomonas chlororaphis O6]
gi|397892994|gb|EJL09470.1| preprotein translocase, SecY subunit [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|398122486|gb|EJM12078.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM17]
Length = 442
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|294783622|ref|ZP_06748946.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
gi|294480500|gb|EFG28277.1| preprotein translocase, SecY subunit [Fusobacterium sp. 1_1_41FAA]
Length = 426
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 240/395 (60%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + ++ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLASMASKSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ V + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGAGVCLWLQSVGLVYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +TV + D
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVISRAPSSVIQTVQKMQGDKFL 211
Query: 277 IGLATIIISFILLV--LGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
I L ++++F+ V GIV Q +RKIPI+Y + S G+ +++P ++N++GVM
Sbjct: 212 IPLF-VLVAFLATVSIAGIVLFQLGQRKIPIHYVGKGFSSKSGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + + ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSDLQLKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E L++ G +IP +RPG+ T +L+ V SRI+ G +FLA+++ P VI + L
Sbjct: 331 DPEKVAENLRQSGGTIPGIRPGEETVEYLEGVASRITWGGGLFLAVISILPYVIFTSMGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|410091910|ref|ZP_11288456.1| preprotein translocase subunit SecY [Pseudomonas viridiflava
UASWS0038]
gi|409760769|gb|EKN45889.1| preprotein translocase subunit SecY [Pseudomonas viridiflava
UASWS0038]
Length = 444
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 254/423 (60%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQA+G + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAVGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|332853159|ref|ZP_08434596.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332868595|ref|ZP_08438251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332876063|ref|ZP_08443847.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|384133268|ref|YP_005515880.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|417577578|ref|ZP_12228423.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|421629012|ref|ZP_16069762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|421654738|ref|ZP_16095065.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|421661190|ref|ZP_16101367.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|421665765|ref|ZP_16105871.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|421695650|ref|ZP_16135255.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|421796547|ref|ZP_16232607.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|421803922|ref|ZP_16239834.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425753957|ref|ZP_18871824.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|445398174|ref|ZP_21429545.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
gi|445456188|ref|ZP_21445722.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|445463833|ref|ZP_21449368.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|445478654|ref|ZP_21454777.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|322509488|gb|ADX04942.1| Secretion protein [Acinetobacter baumannii 1656-2]
gi|332728828|gb|EGJ60187.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013150]
gi|332733272|gb|EGJ64466.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6013113]
gi|332735681|gb|EGJ66724.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
6014059]
gi|395570799|gb|EJG31461.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-17]
gi|404565168|gb|EKA70338.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-692]
gi|408510509|gb|EKK12171.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-72]
gi|408703871|gb|EKL49251.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC180]
gi|408716039|gb|EKL61160.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC110]
gi|410389499|gb|EKP41911.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC087]
gi|410398796|gb|EKP51002.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-21]
gi|410412388|gb|EKP64247.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-694]
gi|425497350|gb|EKU63456.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-113]
gi|444774727|gb|ELW98803.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-78]
gi|444778719|gb|ELX02729.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC047]
gi|444780182|gb|ELX04148.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC338]
gi|444783933|gb|ELX07770.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-57]
Length = 440
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 21 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 80
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 81 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 139
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 140 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 199
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 200 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 256
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 257 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 316
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 317 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 376
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 377 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|293610844|ref|ZP_06693144.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827188|gb|EFF85553.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 440
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 21 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 80
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPY 208
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 81 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 139
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 140 TLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 199
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 200 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 256
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 257 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGFIKSSLQDLALVLSPGQPLYLVL 316
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 317 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 376
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 377 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|162286719|ref|YP_001086060.2| preprotein translocase subunit SecY [Acinetobacter baumannii ATCC
17978]
gi|169794614|ref|YP_001712407.1| preprotein translocase subunit SecY [Acinetobacter baumannii AYE]
gi|184159578|ref|YP_001847917.1| preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|215482203|ref|YP_002324385.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|239503214|ref|ZP_04662524.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB900]
gi|260557047|ref|ZP_05829264.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301512039|ref|ZP_07237276.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB058]
gi|384144687|ref|YP_005527397.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|403674562|ref|ZP_10936809.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 10304]
gi|417544362|ref|ZP_12195448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|417550363|ref|ZP_12201442.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|417555158|ref|ZP_12206227.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|417570375|ref|ZP_12221232.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|417871986|ref|ZP_12516898.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|417875092|ref|ZP_12519913.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|417880084|ref|ZP_12524621.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|417883006|ref|ZP_12527275.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|421455845|ref|ZP_15905189.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|421621595|ref|ZP_16062511.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|421624597|ref|ZP_16065465.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|421633298|ref|ZP_16073935.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|421641633|ref|ZP_16082164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|421647964|ref|ZP_16088375.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|421649978|ref|ZP_16090360.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|421659645|ref|ZP_16099861.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|421669072|ref|ZP_16109100.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|421673738|ref|ZP_16113675.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|421680337|ref|ZP_16120192.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|421685817|ref|ZP_16125583.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|421690311|ref|ZP_16129982.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|421698351|ref|ZP_16137893.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|421704838|ref|ZP_16144279.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|421708617|ref|ZP_16147990.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|421788997|ref|ZP_16225265.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|421809465|ref|ZP_16245300.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425748461|ref|ZP_18866448.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|445444286|ref|ZP_21442930.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|445489908|ref|ZP_21458916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|169147541|emb|CAM85402.1| secretion protein [Acinetobacter baumannii AYE]
gi|183211172|gb|ACC58570.1| Preprotein translocase subunit SecY [Acinetobacter baumannii ACICU]
gi|213987239|gb|ACJ57538.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB307-0294]
gi|260409653|gb|EEX02954.1| preprotein translocase, SecY subunit [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|342223986|gb|EGT89059.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH1]
gi|342225881|gb|EGT90858.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH3]
gi|342226621|gb|EGT91583.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH2]
gi|342236751|gb|EGU01261.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ABNIH4]
gi|347595180|gb|AEP07901.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MDR-ZJ06]
gi|395550823|gb|EJG16832.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC189]
gi|400212083|gb|EJO43045.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-123]
gi|400382250|gb|EJP40928.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC032]
gi|400386188|gb|EJP49262.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-18]
gi|400391575|gb|EJP58622.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-81]
gi|404564583|gb|EKA69762.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-116]
gi|404570844|gb|EKA75916.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-143]
gi|404572651|gb|EKA77693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-58]
gi|407188931|gb|EKE60159.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1122]
gi|407189345|gb|EKE60571.1| preprotein translocase subunit SecY [Acinetobacter baumannii
ZWS1219]
gi|408512377|gb|EKK14022.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC0162]
gi|408514385|gb|EKK15991.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-235]
gi|408516158|gb|EKK17737.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
IS-251]
gi|408697504|gb|EKL43016.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC074]
gi|408701254|gb|EKL46693.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC098]
gi|408706758|gb|EKL52058.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-13]
gi|408706978|gb|EKL52272.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-83]
gi|410385956|gb|EKP38440.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC065]
gi|410389199|gb|EKP41614.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC099]
gi|410389706|gb|EKP42117.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC111]
gi|410399883|gb|EKP52064.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-82]
gi|410414362|gb|EKP66164.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC035]
gi|425491342|gb|EKU57627.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-348]
gi|444761931|gb|ELW86308.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-A-92]
gi|444766350|gb|ELW90625.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AA-014]
gi|452946326|gb|EME51825.1| preprotein translocase subunit SecY [Acinetobacter baumannii
MSP4-16]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 152 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|340753402|ref|ZP_08690188.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
gi|229422994|gb|EEO38041.1| preprotein translocase, SecY subunit [Fusobacterium sp. 2_1_31]
Length = 426
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 241/395 (61%), Gaps = 10/395 (2%)
Query: 99 LSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
++R+G IP GV+ + ++ +LS ++ FSGG R+ I SLGI+P+INA IV
Sbjct: 33 VARVGTLIPAPGVDVDRLASMASKSDVLSYINMFSGGAFTRISIFSLGIIPYINASIVVS 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--VNDFSTDW 216
LL I P+L+++QK EGE+GR ++ Q+TRY ++ AI+Q G L+L+ V + +
Sbjct: 93 LLVSIIPQLEEIQK-EGESGRNRITQWTRYLTIALAIIQGAGVCLWLQSVGLVYNPGISF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+ ++T LT G+ F ++GE+IS +GNG SL+IF ++IS P+S +TV + D
Sbjct: 152 FVRTITTLTAGTVFLMWVGEQISVKGIGNGVSLIIFLNVISRAPSSVIQTVQKMQGDKFL 211
Query: 277 IGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
I L ++++F+ + + GIV Q +RKIPI+Y + S G+ +++P ++N++GVM
Sbjct: 212 IPLF-VLVAFLATVTIAGIVLFQLGQRKIPIHYVGKGFSSKSGIGEKSFIPLRLNTAGVM 270
Query: 335 PIIFSTSSLALPGTL--ARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
P+IF++ + +PG + A + + ++ Y+ L+I FF+++YT L
Sbjct: 271 PVIFASVFMLIPGVIVNALPSDLQLKTTLSIIFGQNHPVYMILYALVIMFFSFFYTALVF 330
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
DP+ V+E L++ G +IP +RPG+ T +L+ V SRI+ G +FLA+++ P VI + L
Sbjct: 331 DPEKVAENLRQSGGTIPGIRPGEETVEYLEGVASRITWGGGLFLAVISILPYVIFTSLGL 390
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT ++I+VG A DT +++ A ++ + YK
Sbjct: 391 PVY--FGGTGIIIVVGVALDTIQQIDAHLVMRDYK 423
>gi|427423983|ref|ZP_18914120.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-136]
gi|425699091|gb|EKU68710.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-136]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPY 208
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 152 TLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGFIKSSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|70732863|ref|YP_262630.1| preprotein translocase subunit SecY [Pseudomonas protegens Pf-5]
gi|395498921|ref|ZP_10430500.1| preprotein translocase subunit SecY [Pseudomonas sp. PAMC 25886]
gi|395797678|ref|ZP_10476966.1| preprotein translocase subunit SecY [Pseudomonas sp. Ag1]
gi|421139057|ref|ZP_15599103.1| preprotein translocase subunit SecY [Pseudomonas fluorescens
BBc6R8]
gi|68347162|gb|AAY94768.1| preprotein translocase, SecY subunit [Pseudomonas protegens Pf-5]
gi|395338046|gb|EJF69899.1| preprotein translocase subunit SecY [Pseudomonas sp. Ag1]
gi|404509780|gb|EKA23704.1| preprotein translocase subunit SecY [Pseudomonas fluorescens
BBc6R8]
Length = 442
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSVGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|126728204|ref|ZP_01744020.1| protein translocase subunit SecY [Sagittula stellata E-37]
gi|126711169|gb|EBA10219.1| protein translocase subunit SecY [Sagittula stellata E-37]
Length = 448
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 241/411 (58%), Gaps = 23/411 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG +IP+ G++ A ++Q S + + F+GG +GR+GI +LGI+P+I
Sbjct: 24 LGLLIVYRLGTFIPVPGIDGAALRDFVEQASTGVAGIVSMFTGGALGRMGIFALGIMPYI 83
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QLL + P L+ L K+EGE GRKK+ QYTRYA+V A +QA G + L D
Sbjct: 84 SASIMVQLLTAMVPTLEQL-KKEGEQGRKKINQYTRYATVALATMQAYGLAVSLEG--GD 140
Query: 212 FSTD--WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD W + ++TL G+ F ++GE+I+ +GNG SL+IF I++ LPA+ +
Sbjct: 141 LVTDPGWYFRAACVITLVGGTMFLMWLGEQITARGVGNGISLIIFVGIVAELPAALAQFF 200
Query: 268 AE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
A A +G +II+ L+ +V+++ A RKI I Y R +S++
Sbjct: 201 ASGRSGAISPAVIVG---VIIAVAALIAFVVFMERALRKITIQYPRRQVGMKMTEAQSSH 257
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGI----AALKKAAVALNPGGSFYLPTNILL 379
LP KVN +GV+P IF++S L LP T++ F+G + PG YL +
Sbjct: 258 LPVKVNPAGVIPAIFASSLLLLPVTISTFSGSDSAGPVMSTILAYFGPGQPLYLLFFGAM 317
Query: 380 IAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
I FF Y+YTF + PDDV++ LK Q +P +RPGK TA +L+ V++R+ V+GS++LA
Sbjct: 318 IVFFAYFYTFNVSFKPDDVADNLKNQNGFVPGIRPGKKTAEYLEYVVNRVLVVGSLYLAG 377
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P ++ T L F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 378 VALMPEILR--TQLAIPFYFGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 426
>gi|424741403|ref|ZP_18169756.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
gi|422944792|gb|EKU39769.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-141]
Length = 452
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPY 208
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 93 ISASIIVQLMSTVIPSLESL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
++ + +VT L G+ F ++GE+I++ +GNG S++IF I+S LP ++V+
Sbjct: 152 TLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVSGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL +G IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSVGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGFIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFSLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|262280205|ref|ZP_06057989.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
gi|262257983|gb|EEY76717.1| secretion protein [Acinetobacter calcoaceticus RUH2202]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 248/414 (59%), Gaps = 25/414 (6%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
L+G L + RLG +IP+ G+N A + NL +Q ++L + FSGG + R+ I +LGI+P
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAA-LENLFQANQGTILGLFNMFSGGALERMSILALGIMP 91
Query: 150 FINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RP 207
+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 92 YISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQG 150
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
++ + +VT L G+ F ++GE+I++ +GNG S++IF I+S LP ++V
Sbjct: 151 ITLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVSGLPNLIMQSV 210
Query: 268 AEAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+ D L ++I F LL LG IV++++A+R+IP+NYA + R + +
Sbjct: 211 SSV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTH 267
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLP 374
LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 268 LPLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGLIKRSLQDLALVLSPGQPLYLV 327
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G++
Sbjct: 328 LFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAI 387
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 388 YITVICLMPMILQSSFGIPFSLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|333922468|ref|YP_004496048.1| preprotein translocase subunit SecY [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748029|gb|AEF93136.1| preprotein translocase, SecY subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 419
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 238/412 (57%), Gaps = 20/412 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L GK L L L + R+G +IP+ GVN EAF L LL D SGG R I ++
Sbjct: 14 LRGKLLFTLAMLFIFRVGAHIPVPGVNPEAFAQLLKGGQLLGFFDVVSGGAFKRASIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ QYTRY + A +QAIG + L
Sbjct: 74 SITPYINASIIMQLLTVVIPHLERLAK-EGEEGRKKITQYTRYFTAVLAFIQAIGMSVAL 132
Query: 206 R-PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ VN ++++ +V+ T G+ +IGE+I+D +GNG SLLIF I+S +P++
Sbjct: 133 KNALVNPSILNYLIVAVS-FTAGTVLLMWIGEQITDKGIGNGISLLIFAGIVSRIPSA-- 189
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGI--------VYVQEAERKIPINYASRYTSRSG 316
G Y+ TI I +LL++ I V VQE +R+IP+ YA R R
Sbjct: 190 -----VVSIGEYLKAGTINILSVLLLIVIGALVIAAVVAVQEGQRRIPVQYAKRVVGRRV 244
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPT 375
++++LP KVN +GV+PIIF++S L PG +A F G A GG
Sbjct: 245 YGGQTSHLPLKVNQAGVIPIIFASSLLMFPGQIASWFHGNAVADWYLRWFAWGGVLNSII 304
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+LI F Y+YT + ++P D++E +K+ G IP +RPG+STA ++ V+S+I++ G+VF
Sbjct: 305 YAMLIIGFTYFYTAVIMNPVDMAENIKKYGGFIPGLRPGRSTAEYIGRVMSKITLAGAVF 364
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P +I T + F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 365 LAAIAILPNIILALTRIPNVY-FGGTALLIVVGVALDTMKQIESHLLMRSYQ 415
>gi|346311567|ref|ZP_08853570.1| preprotein translocase [Collinsella tanakaei YIT 12063]
gi|345900630|gb|EGX70450.1| preprotein translocase [Collinsella tanakaei YIT 12063]
Length = 427
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 246/427 (57%), Gaps = 30/427 (7%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDSFSGGGIGR 139
L GK L + L + R+G ++P+ G+ + +G + ++ L+ FSGG +
Sbjct: 14 LRGKILFTIAMLVVYRIGAHVPVPGIPFQGMLGLFQSAGDSVASGAMALLNLFSGGALSY 73
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
+ + SLGI+P+I I+ Q+L + P L L REGE G+ K+ QYTRY ++G AIV AI
Sbjct: 74 VSVFSLGIMPYITGSIILQMLQSVVPSLHAL-AREGEVGQTKITQYTRYLTLGLAIVNAI 132
Query: 200 GQVLYLRPYVNDFS------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
G + + + F+ + + V LT G+ +IGE I+ +GNG SL+IF
Sbjct: 133 GYLFLFKSFGISFNGAGAPGIIFDIMIVGTLTAGAMLIMWIGELITQRGIGNGMSLIIFA 192
Query: 254 SIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRY 311
+I++ LP + +V +G + T++I I+L + IV+++ +R+IP+ YA R
Sbjct: 193 NIMAGLPQAIFSSV-----EGTAGVITTVVIFVIILCVIPLIVFIERGQRRIPVQYAKRV 247
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGS 370
R +S YLP KVN++GV+PIIF+++ L P +A F I ++ A A++ G
Sbjct: 248 VGRRIMGGQSTYLPIKVNTAGVIPIIFASALLYFPAQIAVFFPNIGWIQTVANAMSTGWI 307
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
++ N+LLI FF Y+YT + +PDD ++ LK+QG IP VRPGK+TA ++K L++I++
Sbjct: 308 NWI-LNVLLIVFFAYFYTSMVFNPDDTADNLKKQGGFIPGVRPGKATANYIKNALNKITL 366
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
++FLAI+A P+++ T + F GTSVLI+VG DT KV+++ ++
Sbjct: 367 PSAIFLAIIAIVPSIVFSFTGNQLIQAFGGTSVLIMVGVVLDTISKVESQ--------LK 418
Query: 491 FYDIDSY 497
YD D +
Sbjct: 419 MYDYDGF 425
>gi|375136139|ref|YP_004996789.1| preprotein translocase subunit SecY [Acinetobacter calcoaceticus
PHEA-2]
gi|325123584|gb|ADY83107.1| preprotein translocase subunit SecY [Acinetobacter calcoaceticus
PHEA-2]
Length = 439
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 20 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 79
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPY 208
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 80 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 138
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 139 TLSVGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 198
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 199 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 255
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 256 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGFIKSSLQDLALVLSPGQPLYLVL 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 316 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 376 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 426
>gi|334338921|ref|YP_004543901.1| preprotein translocase subunit SecY [Desulfotomaculum ruminis DSM
2154]
gi|334090275|gb|AEG58615.1| preprotein translocase, SecY subunit [Desulfotomaculum ruminis DSM
2154]
Length = 419
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 242/406 (59%), Gaps = 8/406 (1%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L GK L L + L R+G++IP+ G+N +AF L +LL D SGG R I ++
Sbjct: 14 LRGKLLFTLAIIFLFRVGVHIPVPGINPDAFADLLKGGALLGFFDVISGGAFKRASIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ QYTRY + A +QAIG L
Sbjct: 74 SITPYINASIIMQLLTVVIPHLERLAK-EGEEGRKKITQYTRYFTAVLAFIQAIGMSAAL 132
Query: 206 R-PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ VN ++++ ++T T G+ ++GE+I++ +GNG SLLIF I+S +P++
Sbjct: 133 KGALVNPSVWNYLMVALT-FTAGTVLLMWMGEQITEKGIGNGISLLIFAGIVSRIPSAL- 190
Query: 265 RTVAEAFQDGNYIGLATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
++ E + G L+ +++ I L++ +V VQE +R+IP+ YA R R +S+
Sbjct: 191 VSIGEYLEAGTINILSILLLIVIGTLVIAAVVAVQEGQRRIPVQYAKRVVGRRVYGGQSS 250
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILLIA 381
+LP KVN +GV+PIIF++S L PG +A F G + GG LLI
Sbjct: 251 HLPIKVNQAGVIPIIFASSLLMFPGQIASWFQGNSVAAWYLKWFAWGGVLNSLLYALLII 310
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
F Y+YT + ++P D++E +K+ G IP +RPG+ TA ++ V+SRI++ G++FLAI+A
Sbjct: 311 GFTYFYTAVIMNPVDMAENIKKYGGFIPGLRPGRPTADYIGKVMSRITLAGALFLAIIAI 370
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P VI T + F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 371 LPNVILALTRIPNVY-FGGTALLIVVGVALDTMKQIESHLLMRSYQ 415
>gi|385239007|ref|YP_005800346.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|416146878|ref|ZP_11601425.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|417562989|ref|ZP_12213868.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|417565703|ref|ZP_12216577.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|421199981|ref|ZP_15657142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|421790954|ref|ZP_16227142.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
gi|323519508|gb|ADX93889.1| preprotein translocase subunit SecY [Acinetobacter baumannii
TCDC-AB0715]
gi|333365834|gb|EGK47848.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB210]
gi|395525571|gb|EJG13660.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC137]
gi|395557459|gb|EJG23460.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC143]
gi|395564978|gb|EJG26629.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
OIFC109]
gi|410403832|gb|EKP55906.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Naval-2]
Length = 439
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 20 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 79
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 80 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 138
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 139 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 198
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 199 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 255
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 256 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 315
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 316 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 375
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 376 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 426
>gi|304310036|ref|YP_003809634.1| Preprotein translocase subunit [gamma proteobacterium HdN1]
gi|301795769|emb|CBL43968.1| Preprotein translocase subunit [gamma proteobacterium HdN1]
Length = 446
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 261/421 (61%), Gaps = 15/421 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
KFL L + + R+G +IP+ G++ E Q ++LS + FSGG + R+ + +LG
Sbjct: 26 KFLLL--AMVVYRIGAHIPVPGIDPEQLKHMFQQQAGTILSLFNMFSGGALERMSVMALG 83
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY ++G ++Q+ G L L+
Sbjct: 84 IMPYISASIIMQLMQAVSPQLEQL-KKEGEAGRRKISQYTRYGTLGLGVLQSFGMSLALQ 142
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ W+L +V LT G+ F ++GE+I++ +GNG S++IF I++ LP + G
Sbjct: 143 SQGVTLAVGLAWILPAVLTLTTGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPQAIG 202
Query: 265 RTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+++ A Q + + I L ++ +L+V G+V+++ A+R+I I++A + R+ + ++
Sbjct: 203 QSLESARQGELSEILLVALLGVAVLVVAGVVFMERAQRRITIHHARKQQGRAVYQAQQSH 262
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILL 379
LP K+N +GV+P IF+TS L P +L ++ G + L+ A ALNPG Y+
Sbjct: 263 LPLKINMAGVIPPIFATSILLFPASLGQWFGETEYASWLQDVANALNPGQPLYVILFAAA 322
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
FF Y+YT + +P DV+E LK+ GA +P +RPG+ TA ++ +VL R++ +GS+++ ++
Sbjct: 323 NVFFCYFYTAIMFNPKDVAENLKKSGALVPGIRPGEQTARYIDSVLGRLTFIGSIYITLV 382
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
P +++ ++ + G GTS+LI+V D +VQ+ ++S +Y+ + + ++ YG
Sbjct: 383 CLLPLILQAFGNVPFYLG--GTSLLIVVVVVMDFMSQVQSHMLSHQYEPLMKKANLKGYG 440
Query: 499 S 499
S
Sbjct: 441 S 441
>gi|110833278|ref|YP_692137.1| preprotein translocase subunit SecY [Alcanivorax borkumensis SK2]
gi|110646389|emb|CAL15865.1| Preprotein translocase SecY subunit [Alcanivorax borkumensis SK2]
Length = 460
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 251/431 (58%), Gaps = 32/431 (7%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
LLG L + R+G +IP+ G+N EA + N +++++L + FSGG + R+ I +LGI+P+
Sbjct: 31 LLGALVVFRVGAHIPVPGMNPEALQQMFNNNRDTILGLFNMFSGGSLERMSIFALGIMPY 90
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-------L 203
I A IV QL+ + P L+ L+K EGE GR+K+ QYTRY +V +Q+ G V +
Sbjct: 91 ITASIVIQLMTAVVPTLEQLRK-EGEQGRRKITQYTRYLTVVLGAIQSFGMVAGLNSQGI 149
Query: 204 YLRPYVNDFS--TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
L P + +V+ L G+ F ++GE+I++ +GNG S+LIF SI+S LP
Sbjct: 150 TLLPETASTMQLASFYFVAVSTLVTGTVFLMWLGEQITERGIGNGISMLIFASIVSGLPG 209
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLV-----LGIVYVQEAERKIPINYASRYTSRSG 316
+ VA+ F+ L+ I++ F+ LV G+VYV+ +R+I +NYA R R
Sbjct: 210 A----VAQTFESARTGDLSLIMMLFVFLVAMAVIFGVVYVERGQRRITVNYARRQQGRRV 265
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--------ALKKAAVALNPG 368
+ ++LP KVN +GV+P IF++S L P +L ++ + AL+ + AL PG
Sbjct: 266 YAAQQSHLPLKVNMAGVIPAIFASSILLFPASLTQWFSDSNPDSWWGQALRNVSEALLPG 325
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
Y+ L I FF Y+YT L +P DV++ LK+ GA IP +RPG+ +A ++ TV+ R+
Sbjct: 326 TPLYILLFTLAIVFFCYFYTALVFNPKDVADNLKKSGAYIPGIRPGEQSARYIDTVMGRL 385
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY-K 487
+++G+V++ ++ P ++ ++ + G GTS+LI+V D +V + + S +Y K
Sbjct: 386 TLIGAVYMTLVCLLPLGLQAVANVPFYLG--GTSLLIVVVVVMDFWSQVNSHLTSTQYEK 443
Query: 488 NIEFYDIDSYG 498
++ ++ YG
Sbjct: 444 LMKKSNLKGYG 454
>gi|389703891|ref|ZP_10185685.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
gi|388611273|gb|EIM40377.1| preprotein translocase subunit SecY [Acinetobacter sp. HA]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 245/420 (58%), Gaps = 29/420 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IP+ G+N A + N +Q ++L + FSGG + R+ I +LG
Sbjct: 29 RMMFLIGALLVFRLGAHIPVPGINNAALENLFNANQGTILGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A VQA+G L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRQGTLFLAFVQAVGMCAGL- 146
Query: 207 PYVNDFSTDWVLTS--------VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
S LTS VT L G+ F ++GE+I++ +GNG S++IF I++
Sbjct: 147 -----ISQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAG 201
Query: 259 LPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
LP +++ + IGLA + I ++ IV++++A+R+IP+NYA + R
Sbjct: 202 LPTLVMQSLTSVDNGQSSLIGLAIFALLSIAVLAAIVFIEKAQRRIPVNYAQKQQGRRVF 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPG 368
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 262 TAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPDAGIIKRSLQDLALVLSPG 321
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R+
Sbjct: 322 QPLYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRL 381
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ +G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 382 TFIGAIYITVICLMPMILQSSFGIPFSLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|344923978|ref|ZP_08777439.1| preprotein translocase subunit SecY [Candidatus Odyssella
thessalonicensis L13]
Length = 448
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 240/408 (58%), Gaps = 18/408 (4%)
Query: 97 LALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R G YIPL GVN ++ + LD FSGG I R+ + +L I+P+I+A
Sbjct: 34 LIVYRFGTYIPLPGVNPLVIQEFAAMNSGGIFGILDMFSGGAISRMTVFALNIMPYISAS 93
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST 214
I+ QL+ ++P L+ L K+EGE+GRKK+ QYTRY +V A VQA G + L V ST
Sbjct: 94 IIVQLMTSVSPHLEAL-KKEGESGRKKLNQYTRYGTVLLASVQAFGIAVGLEKMVVGTST 152
Query: 215 D-------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ +++ LT G+ F ++GE+I+ LGNGTSL+I++ I++ LP SF +T
Sbjct: 153 AVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGTSLIIYSGIVANLPQSFAKTF 212
Query: 268 AEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQ-RSAYLP 325
A G+ +I+ + +V+ +V++++A+R+I I Y R + Q ++ +LP
Sbjct: 213 ISARTGAISNGILVLILLMVAVVIAYVVFMEKAQRRILIQYPKRQVAADRPAQAQTTHLP 272
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGI----AALKKAAVALNPGGSFYLPTNILLIA 381
K+NSSGV+P IF+ S L P T+A F+G + L A + G Y+ + LI
Sbjct: 273 LKLNSSGVIPPIFANSLLLFPATIAGFSGSMNPDSILGMIATYMAHGKPLYMICSTALII 332
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF ++YT L +P + +E L++ G IP +RPGK+TA ++ VL+R++V+GS++LA +
Sbjct: 333 FFAFFYTALVFNPTETAENLRKMGTFIPGIRPGKATADYIDYVLTRLTVIGSIYLASICL 392
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +I L + F GTS+LI+V DT ++Q+ +++ +Y+ +
Sbjct: 393 LPELILSKVALPFY--FGGTSILIVVSVTIDTISQMQSHLVAHQYEGL 438
>gi|154249797|ref|YP_001410622.1| preprotein translocase subunit SecY [Fervidobacterium nodosum
Rt17-B1]
gi|154153733|gb|ABS60965.1| preprotein translocase, SecY subunit [Fervidobacterium nodosum
Rt17-B1]
Length = 428
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 237/408 (58%), Gaps = 23/408 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS------LLSTLDSFSGGGIGRLGIC 143
FL LL + RLGIY+P+ G+N +A+ L + +LS D F+GG R +
Sbjct: 22 FLMLLVF----RLGIYVPVPGINIKAWGEALSKQGTGLAGGVLSFYDVFTGGAFSRFSVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
S+ + P+INA I+ QLLA I P L++L K EGE GRKK YT+ ++G A +Q+
Sbjct: 78 SMSVTPYINASIIMQLLASIIPSLKELLK-EGEEGRKKFQHYTKNLTLGLAALQSFVVSF 136
Query: 204 YL-RPYVNDFSTD-WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L R Y + + W+ + V+ ++L G+ F +IG+RI++ +GNG S++IF I+S
Sbjct: 137 GLARSYQGIIAINTWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSIMIFAGIVSRY 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
PA F V + N G +I I +V+ I+YVQ+AER+I I YA+R R
Sbjct: 197 PAYFRSAV---LGNLNIFGWIFLIAVAIFMVVAIIYVQQAERRIKIEYATRMVGRRIYGG 253
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
S YLP KVN SGV+PIIF+ + +++P +A+ TG K +P + LL
Sbjct: 254 TSTYLPIKVNHSGVIPIIFAWAIISIPEAIAQITGAQWAIKLFSMQSP---LMMIIYALL 310
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF Y+Y+ + +DP D+SE +KR G IP +R GK T ++ VL+R++ LG++FL +
Sbjct: 311 IFFFTYFYSVVVIDPKDISENIKRYGGFIPGIRAGKPTEEYITFVLNRVTFLGAIFLVGI 370
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ P ++E T + + G GTS LI VG A D A++++A +I + Y+
Sbjct: 371 SLLPYLVEGITRVNIWLG--GTSALIAVGVALDIAQQIEAHLIMRNYE 416
>gi|169632370|ref|YP_001706106.1| preprotein translocase subunit SecY [Acinetobacter baumannii SDF]
gi|169151162|emb|CAO99834.1| secretion protein [Acinetobacter baumannii]
Length = 452
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 248/413 (60%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 152 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+A++ P +++ + + + G GTS+LI+V D ++QA + +Y N
Sbjct: 389 IAVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTFHQYDN 439
>gi|387895906|ref|YP_006326203.1| preprotein translocase subunit SecY [Pseudomonas fluorescens A506]
gi|388468276|ref|ZP_10142486.1| preprotein translocase, SecY subunit [Pseudomonas synxantha BG33R]
gi|423693842|ref|ZP_17668362.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
SS101]
gi|440737875|ref|ZP_20917426.1| preprotein translocase subunit SecY [Pseudomonas fluorescens
BRIP34879]
gi|447918573|ref|YP_007399141.1| preprotein translocase subunit SecY [Pseudomonas poae RE*1-1-14]
gi|387163262|gb|AFJ58461.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens A506]
gi|388000395|gb|EIK61724.1| preprotein translocase, SecY subunit [Pseudomonas fluorescens
SS101]
gi|388011856|gb|EIK73043.1| preprotein translocase, SecY subunit [Pseudomonas synxantha BG33R]
gi|440381614|gb|ELQ18140.1| preprotein translocase subunit SecY [Pseudomonas fluorescens
BRIP34879]
gi|445202436|gb|AGE27645.1| preprotein translocase subunit SecY [Pseudomonas poae RE*1-1-14]
Length = 442
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G + L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSENMGWLQDLSQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|93005334|ref|YP_579771.1| preprotein translocase subunit SecY [Psychrobacter cryohalolentis
K5]
gi|92393012|gb|ABE74287.1| protein translocase subunit secY/sec61 alpha [Psychrobacter
cryohalolentis K5]
Length = 443
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 252/419 (60%), Gaps = 27/419 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L+G L + R G +IP+ G+N A + + ++N++LS + FSGG + R+ I +LG
Sbjct: 23 RLLFLIGALIVYRFGSHIPVPGINPVNLADLFSRNENTILSMFNMFSGGALERMSIMALG 82
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q+++ + P L+ L K+EGEAGR+K+ +YTR ++ A+VQ++G L
Sbjct: 83 IMPYISASIIVQMMSAVLPSLEAL-KKEGEAGRRKLNKYTRQGTLALALVQSLGMCAGLI 141
Query: 207 PYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
S+ + + +VT L G+ F ++GE+I++ +GNG S+LIF SI++ P
Sbjct: 142 SQNLTLSSGLTFYIPAVTSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVAGTPGMIS 201
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG------IVYVQEAERKIPINYASRYTS-RSGG 317
+++ + Q G +I+ FI +LG IVY++ A+R++P+NYA + R
Sbjct: 202 QSIEQVNQ-----GQMNLIVLFIFALLGVAVTAGIVYIERAQRRVPVNYAQKQQQGRKIY 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGG 369
Q+ ++LP K+N +GV+P IF++S L P +L ++ G + L+ A+ L+PG
Sbjct: 257 AQQQSHLPLKLNMAGVIPAIFASSLLLFPASLGQWVGQSPDPTLTQKILQNMALVLSPGQ 316
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YT L P +V+E LKR GA IP +RPG+ T +L VL+R++
Sbjct: 317 PLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGQQTQRYLDHVLNRLT 376
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V+ Q++ F+ GTS+LI+V D ++QA +++ +Y +
Sbjct: 377 FIGAMYMTVICLMPMVV-QSSFGVPFQ-LGGTSLLIMVVVVMDFISQIQAHLMTHQYHD 433
>gi|338534515|ref|YP_004667849.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
gi|337260611|gb|AEI66771.1| preprotein translocase subunit SecY [Myxococcus fulvus HW-1]
Length = 462
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 246/431 (57%), Gaps = 27/431 (6%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F + F+ L + L LA+ R+GI+I GV+R A +D L+S + F
Sbjct: 20 FANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLF 79
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I LGI+P+++A I+ QLLA + P L+ LQK EG GR+K+ QYTRY ++
Sbjct: 80 SGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQK-EGAGGRQKINQYTRYGTIA 138
Query: 193 FAIVQAIGQVLYL--------------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
++VQ IG +L + V D S + +V LT G+AF ++GERI
Sbjct: 139 LSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGERI 198
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQ 297
++ +GNG SL+IF I++ L + + QD + ++ F+L+++ +VYV+
Sbjct: 199 TERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISVAEVLALVVFMLIIIAAVVYVE 258
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
R+IPI YA R R ++ Y P KVN+SGV+P IF+ + L+ P TL T
Sbjct: 259 RGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLG--TWFPF 316
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L+ A+ Y +L++ FF Y+YT L PDDV++ +K+QG IP +RPG+ T
Sbjct: 317 LQGFQRAIEGNLWIYNGLFVLMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQT 376
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARK 476
A F++ VL+R++ G+++L+++ P+VI + L R F GT++LI+VG A DT ++
Sbjct: 377 AEFIERVLNRLTFGGAIYLSVICVIPSVI---SGLLGVRFTFGGTALLIVVGVALDTVQQ 433
Query: 477 VQAEIISQKYK 487
++ +IS+ Y+
Sbjct: 434 IEGHLISRNYE 444
>gi|323703528|ref|ZP_08115174.1| preprotein translocase, SecY subunit [Desulfotomaculum nigrificans
DSM 574]
gi|323531519|gb|EGB21412.1| preprotein translocase, SecY subunit [Desulfotomaculum nigrificans
DSM 574]
Length = 419
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 238/412 (57%), Gaps = 20/412 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L GK L L L + R+G +IP+ GVN EAF L LL D SGG R I ++
Sbjct: 14 LRGKLLFTLAMLFIFRVGAHIPVPGVNPEAFAQLLKGGQLLGFFDVVSGGAFKRASIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ QYTRY + A +QAIG + L
Sbjct: 74 SITPYINASIIMQLLTVVIPHLERLAK-EGEEGRKKITQYTRYFTAVLAFIQAIGMSVAL 132
Query: 206 R-PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ VN ++++ +++ T G+ +IGE+I+D +GNG SLLIF I+S +P++
Sbjct: 133 KNALVNPSILNYLIVAIS-FTAGTVLLMWIGEQITDKGIGNGISLLIFAGIVSRIPSA-- 189
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGI--------VYVQEAERKIPINYASRYTSRSG 316
G Y+ TI I +LL++ I V VQE +R+IP+ YA R R
Sbjct: 190 -----VVSIGEYLKAGTINILSVLLLIVIGALVIAAVVAVQEGQRRIPVQYAKRVVGRRV 244
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPT 375
++++LP KVN +GV+PIIF++S L PG +A F G A GG
Sbjct: 245 YGGQTSHLPLKVNQAGVIPIIFASSLLMFPGQIASWFHGNAVADWYLRWFAWGGVLNSII 304
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+LI F Y+YT + ++P D++E +K+ G IP +RPG+STA ++ V+S+I++ G+VF
Sbjct: 305 YAMLIIGFTYFYTAVIMNPVDMAENIKKYGGFIPGLRPGRSTAEYIGRVMSKITLAGAVF 364
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P +I T + F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 365 LAAIAILPNIILALTRIPNVY-FGGTALLIVVGVALDTMKQIESHLLMRSYQ 415
>gi|299768686|ref|YP_003730712.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
gi|298698774|gb|ADI89339.1| preprotein translocase subunit SecY [Acinetobacter oleivorans DR1]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPY 208
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L +
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
++ + +VT L G+ F ++GE+I++ +GNG S++IF I+S LP ++V+
Sbjct: 152 TLSVGLEFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVSGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL +G IV++++A+R+IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSVGVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADANAGLIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFSLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|404492311|ref|YP_006716417.1| preprotein translocase subunit SecY [Pelobacter carbinolicus DSM
2380]
gi|77544418|gb|ABA87980.1| preprotein translocase, SecY subunit [Pelobacter carbinolicus DSM
2380]
Length = 435
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 249/413 (60%), Gaps = 21/413 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+ L LG LA+ R+G ++P+ G+N + + +LL + +F+GG + R+ + +LG
Sbjct: 17 RILFTLGMLAVYRVGCHVPIPGINADVLAEFFQKTEGTLLGMVSAFTGGALARMTVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL + ++ L K EGE GRK + ++TRY ++ +IVQ G + L+
Sbjct: 77 IMPYISASIILQLLGVVFEPVERLSK-EGEQGRKTITKWTRYGTIVLSIVQGTGIAVGLQ 135
Query: 207 -------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
P V+ ++L +V LT G+AF ++GE+I++ +GNG SL+IF II+ +
Sbjct: 136 SMTIGQAPVVSSPGIGFILLTVLTLTSGTAFIMWVGEQITERGIGNGISLIIFAGIIADM 195
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVL-----GIVYVQEAERKIPINYASRYTSR 314
P++ T+ A N L+ + F+L+V+ IV+++ A+R++PI+YA R
Sbjct: 196 PSAVFNTLRLA----NTGALSPAKLLFVLVVVIATVWAIVFMELAQRRLPIHYAKRVVGM 251
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP 374
++++LP K+N SGV+P IF++S + P T+A I ++KAA + PG Y
Sbjct: 252 RNYGGQNSHLPLKINMSGVIPPIFASSIIMFPATVANLIDIPWVQKAAGWMAPGNLVYYI 311
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF Y+YT + +P DV++ +K+QG IP +RPGK+T+ ++ +VL R++ G+
Sbjct: 312 FYVAFIIFFCYFYTAVTFNPVDVADNVKKQGGYIPGIRPGKATSDYIDSVLGRLTFAGAA 371
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++++ P ++ ++ F F GTS+LI+VG DTA +V+A +IS+ Y+
Sbjct: 372 YVSLVCVLPTLLVSGLNVPFF--FGGTSLLIVVGVGLDTASQVEAHLISRSYE 422
>gi|359394359|ref|ZP_09187412.1| Preprotein translocase subunit secY [Halomonas boliviensis LC1]
gi|357971606|gb|EHJ94051.1| Preprotein translocase subunit secY [Halomonas boliviensis LC1]
Length = 437
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 245/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ + +LGI+P+I+A I+ Q
Sbjct: 26 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSVLALGIMPYISASIIMQ 85
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
L+ ++P L+ L K+EGEAGR+K+ QYTRY +V A VQA+G + L Y DFS
Sbjct: 86 LMTAVSPHLEQL-KKEGEAGRRKISQYTRYGTVILAFVQAVGMSVGLASQGIAYTADFS- 143
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T+V G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+ A +G
Sbjct: 144 -FFFTAVITFVSGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPSAVGQAFELARNEG 202
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + L + + I V +V+++ +R++ +NY R +S+YLP KVN +G
Sbjct: 203 AWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRRQVGNKMYAGQSSYLPLKVNMAG 262
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P ++ ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 263 VIPAIFASSILLFPASIGQWVGAGEGMEWLQRASQALGPGQPLYILLFAAAVVFFCFFYT 322
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 323 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYIDKVMTRLTLFGALYITAVSLMPQFLIV 382
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 383 AWNVPFF--FGGTSLLIVVVVIMDFMAQVQSHLMSHQYDSVMKKSNLKGYGS 432
>gi|319893180|ref|YP_004150055.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius HKU10-03]
gi|386318601|ref|YP_006014764.1| preprotein translocase subunit SecY [Staphylococcus
pseudintermedius ED99]
gi|317162876|gb|ADV06419.1| Preprotein translocase secY subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|323463772|gb|ADX75925.1| preprotein translocase, SecY subunit [Staphylococcus
pseudintermedius ED99]
Length = 430
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 243/421 (57%), Gaps = 15/421 (3%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FFK + K L L L + ++G YIP GVN AF + L++F GG +
Sbjct: 7 NFFKTKEVRNKILFTLAMLVIFKIGTYIPAPGVNPAAFDNRQGSQGVTDLLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +GE GRKK+ +TRY ++ A +Q
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGETGRKKLNNFTRYFTIVLAFIQ 125
Query: 198 AIGQVLYLRPYVN----DFSTDW-VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG Y++ W L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMSFQFNNYLDGALIKEQNVWSYLLIAIVLTSGTAFLMWLGEQITQYGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAF--QDG---NYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
I+S LP+ + + F QD ++ +A +++ ILL +G VYV +A RKIPI Y
Sbjct: 186 AGILSTLPSGLMQFYQQEFIGQDDVTFAWLKVAGLVVGMILLTVGAVYVLQAIRKIPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALN 366
A + + G Q + YLP KVNS+GV+P+IFS + LP TL+ F A +K +
Sbjct: 246 AKKQSHMRLGSQ-ATYLPLKVNSAGVIPVIFSMAFFLLPRTLSLFFPDADWAQKLGNYAD 304
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P + + ++LI F Y+Y F+Q++P+ ++E LK+QG+ +P +RPG+ T ++ VL
Sbjct: 305 PSHNMGMVVYVVLIIAFTYFYAFVQVNPEKMAENLKKQGSYVPGIRPGEQTKKYITKVLY 364
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++ ++Y
Sbjct: 365 RLTFVGSIFLAVIAILPIIATKFMNLPQAIQLGGTSLLIVIGVAIETMKSLEAQVNEKEY 424
Query: 487 K 487
K
Sbjct: 425 K 425
>gi|126697660|ref|YP_001086557.1| preprotein translocase subunit SecY [Clostridium difficile 630]
gi|254973751|ref|ZP_05270223.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-66c26]
gi|255091141|ref|ZP_05320619.1| preprotein translocase SecY subunit [Clostridium difficile CIP
107932]
gi|255099252|ref|ZP_05328229.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-63q42]
gi|255305035|ref|ZP_05349207.1| preprotein translocase SecY subunit [Clostridium difficile ATCC
43255]
gi|255312795|ref|ZP_05354378.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-76w55]
gi|255515554|ref|ZP_05383230.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-97b34]
gi|255648649|ref|ZP_05395551.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-37x79]
gi|260681866|ref|YP_003213151.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260685464|ref|YP_003216597.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|306518771|ref|ZP_07405118.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-32g58]
gi|384359419|ref|YP_006197271.1| preprotein translocase SecY subunit [Clostridium difficile BI1]
gi|423081676|ref|ZP_17070278.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|423085170|ref|ZP_17073625.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|423089485|ref|ZP_17077843.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
gi|115249097|emb|CAJ66908.1| Preprotein translocase SecY subunit [Clostridium difficile 630]
gi|260208029|emb|CBA60223.1| preprotein translocase SecY subunit [Clostridium difficile CD196]
gi|260211480|emb|CBE01614.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
gi|357550254|gb|EHJ32079.1| preprotein translocase, SecY subunit [Clostridium difficile
002-P50-2011]
gi|357550502|gb|EHJ32316.1| preprotein translocase, SecY subunit [Clostridium difficile
050-P50-2011]
gi|357558095|gb|EHJ39602.1| preprotein translocase, SecY subunit [Clostridium difficile
70-100-2010]
Length = 422
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 239/407 (58%), Gaps = 13/407 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K + L + + R+G IP+ G++ + NSLLS + F+GG + +LGI
Sbjct: 17 KVMYTLMMIVIFRIGTTIPVPGIDTSIIQKMVGGNSLLSLYNMFTGGAFSNFSLFALGIS 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRP 207
P+I A I+ QLL L +LQK GE G+KK+ +YT+Y ++ A+VQA+G L +R
Sbjct: 77 PYITASIIIQLLTVGFESLAELQK-SGEEGKKKINKYTKYTALALAVVQALGITLGIVRS 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ S ++ T V L S +IG++I++ +GNG+S++IF IIS +P + +
Sbjct: 136 ALISNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNGSSVIIFAGIISRIPTDVIK-I 194
Query: 268 AEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
++ + G +I++ ++L V G+ ++QEA RKIP+ YA R R +S+++P
Sbjct: 195 SQQVKSGEVAPWVIVILAVVILLTVTGVTFIQEATRKIPVQYAKRVVGRKMYGGQSSHIP 254
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIA 381
KVN SGVMPIIF++S LA P T+A F G A K ++A G Y ILLI
Sbjct: 255 MKVNQSGVMPIIFASSLLAFPQTIAMFMGPNAQAFVQKYLSMATEQGFWTYRSIEILLII 314
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF+Y+YT + + +D+S+ +K G IP +RPG+ T +L +L+R+++ G+ FLAI+A
Sbjct: 315 FFSYFYTTVSFNTEDISKNMKNNGGFIPGIRPGEPTMDYLNRILTRLTLAGATFLAIIAM 374
Query: 442 GPAVIEQTTH-LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
PA+ TTH + AGTS+LI+VG A + R++++ ++ + Y+
Sbjct: 375 VPAL---TTHYMKVNMSLAGTSLLIVVGVALELKRQLESNLVMRSYQ 418
>gi|255654182|ref|ZP_05399591.1| preprotein translocase SecY subunit [Clostridium difficile
QCD-23m63]
gi|296449779|ref|ZP_06891548.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296877843|ref|ZP_06901865.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
gi|296261377|gb|EFH08203.1| preprotein translocase subunit SecY [Clostridium difficile NAP08]
gi|296431143|gb|EFH16968.1| preprotein translocase subunit SecY [Clostridium difficile NAP07]
Length = 422
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 239/407 (58%), Gaps = 13/407 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K + L + + R+G IP+ G++ + NSLLS + F+GG + +LGI
Sbjct: 17 KVMYTLMMIVIFRIGTTIPVPGIDTSIIQKMVGGNSLLSLYNMFTGGAFSNFSLFALGIS 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRP 207
P+I A I+ QLL L +LQK GE G+KK+ +YT+Y ++ A+VQA+G L +R
Sbjct: 77 PYITASIIIQLLTVGFESLAELQK-SGEEGKKKINKYTKYTALALAVVQALGITLGIVRS 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ S ++ T V L S +IG++I++ +GNG+S++IF IIS +P + +
Sbjct: 136 ALISNSVFFITTVVITLVSASMLVMWIGDKITEKGIGNGSSVIIFAGIISRIPTDVIK-I 194
Query: 268 AEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
++ + G +I++ ++L V G+ ++QEA RKIP+ YA R R +S+++P
Sbjct: 195 SQQVKSGQVAPWVIVILAVVILLTVTGVTFIQEATRKIPVQYAKRVVGRKMYGGQSSHIP 254
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIA 381
KVN SGVMPIIF++S LA P T+A F G A K ++A G Y ILLI
Sbjct: 255 MKVNQSGVMPIIFASSLLAFPQTIAMFMGPNAQAFVQKYLSMATEQGFWTYRSIEILLII 314
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF+Y+YT + + +D+S+ +K G IP +RPG+ T +L +L+R+++ G+ FLAI+A
Sbjct: 315 FFSYFYTTVSFNTEDISKNMKNNGGFIPGIRPGEPTMDYLNRILTRLTLAGATFLAIIAM 374
Query: 442 GPAVIEQTTH-LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
PA+ TTH + AGTS+LI+VG A + R++++ ++ + Y+
Sbjct: 375 VPAL---TTHYMKVNMSLAGTSLLIVVGVALELKRQLESNLVMRSYQ 418
>gi|116749010|ref|YP_845697.1| preprotein translocase subunit SecY [Syntrophobacter fumaroxidans
MPOB]
gi|116698074|gb|ABK17262.1| protein translocase subunit secY/sec61 alpha [Syntrophobacter
fumaroxidans MPOB]
Length = 435
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 242/416 (58%), Gaps = 24/416 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
+ L L LA+ R+G +IP G+N +A Q +LL D FSGG + +L + SLG
Sbjct: 17 RILVTLALLAVYRVGAHIPTPGINGDALAAFFKQLSGTLLGLFDMFSGGALSQLSVFSLG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI------- 199
I+P+I+A I+ QLL + P L+ L K EG+AGR+K+ QYTRY +V +++Q
Sbjct: 77 IMPYISASIILQLLTVVIPTLERLSK-EGDAGRRKITQYTRYGTVILSVIQGFAIGVGLE 135
Query: 200 ------GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
G+++ L P + LT+V LT G+AF ++GE+I++ +GNG SL+IF
Sbjct: 136 GMTGPGGEIVVLHP-----GWGFRLTTVLTLTAGTAFIMWLGEQITERGIGNGISLIIFA 190
Query: 254 SIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYT 312
I++ +P + TV L + +F+L V+ I++++ +R+IP+ YA R
Sbjct: 191 GIVAGIPNALENTVRMVTMGEMSAFLLLGLAAFMLAVVAVIIFMERGQRRIPVQYAKRVV 250
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY 372
R ++ ++P K+N+SGV+P IF++S + PGT+ F ++ A AL PG +
Sbjct: 251 GRRVYGGQNTHIPLKINTSGVIPPIFASSIMMFPGTVGSFIKTPWMEWIANALGPGQWLH 310
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ LI FF ++YT + +P DV++ +K+ G IP +RPG+ TA ++ VLSRI+V G
Sbjct: 311 SILYVALIVFFCFFYTAIVFNPLDVADNMKKYGGFIPGIRPGRPTAEYIDKVLSRITVGG 370
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+V+++ + P ++ + + F GT++LI++G A DT +++A ++S+ Y+
Sbjct: 371 AVYISAVCVLPTILISRFAVPFY--FGGTALLIVIGVAMDTLAQIEAHMLSRHYEG 424
>gi|260427858|ref|ZP_05781837.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
gi|260422350|gb|EEX15601.1| preprotein translocase, SecY subunit [Citreicella sp. SE45]
Length = 448
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 243/420 (57%), Gaps = 25/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG YIP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 16 LRNRILFTLGLLIVYRLGTYIPVPGIDGAALRNFMEQAGQGIGGMVSMFTGGALGRMGIF 75
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA + P L+ L K+EGE GRKK+ QYTRY +V A+ QA G +
Sbjct: 76 ALGIMPYISASIIVQLLAAMVPFLEQL-KKEGEQGRKKINQYTRYGTVALALFQAYGLAV 134
Query: 204 YLRPYVNDFSTD--WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D + D W + ++TL G+ F ++GE+I+ +GNG SL+IF I++ +
Sbjct: 135 SLE--AGDLAHDPGWYFRAAVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 192
Query: 260 PASFGRTVAEAFQDGN--YIGLATI---IISFILLVLGIVYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G I A I I+ +L+++ +V+++ A RKI I Y R
Sbjct: 193 PAA----LAQFFASGRSGAISPAIILGAIVMVVLVIMFVVFMERALRKITIQYPRRQVGM 248
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGS 370
+ ++LP KVN +GV+P IF++S L LP T+A F+ + + PG
Sbjct: 249 KMTEAQQSHLPVKVNPAGVIPAIFASSLLLLPTTIATFSQAGSTGPVMSTILAYFGPGQP 308
Query: 371 FYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YTF + PD+V++ LK Q IP +RPGK TA L+ V++RI
Sbjct: 309 LYLLFFAAMIVFFAYFYTFNVSFKPDEVADNLKNQNGFIPGIRPGKKTADHLEYVVNRIL 368
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
VLGS +LA + P ++ + + F GTSVLI+V DT +++Q+ +++ +Y+ +
Sbjct: 369 VLGSAYLAAVCLMPEILRSQFAIPFY--FGGTSVLIVVSVTMDTIQQIQSHLLAHQYEGL 426
>gi|261492712|ref|ZP_05989260.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495673|ref|ZP_05992119.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308780|gb|EEY10037.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311565|gb|EEY12720.1| preprotein translocase subunit SecY [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 439
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 250/417 (59%), Gaps = 14/417 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELIRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRY ++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYGTLLLAFIQSIGI 134
Query: 202 VLYLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L L V+ S + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SLALPNMVHGLVPNPSILFYVTSVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ G+T+ +A Q + ++I L + I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQGELSFIVLLLVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMM 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFY 372
R+++LP KVN +GV+P IF++S + P ++ ++ G L + L PG Y
Sbjct: 255 APARTSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLY 314
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++G
Sbjct: 315 VVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIG 374
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++A + P +I + G GTS+LI+V D +VQ+ ++SQ+Y ++
Sbjct: 375 ALYIAFVCLVPYIITSLWKVPFQLG--GTSLLIVVVVIMDFIAQVQSHLMSQQYDSV 429
>gi|229592883|ref|YP_002875002.1| preprotein translocase subunit SecY [Pseudomonas fluorescens SBW25]
gi|312963348|ref|ZP_07777831.1| preprotein translocase SecY subunit [Pseudomonas fluorescens WH6]
gi|395651548|ref|ZP_10439398.1| preprotein translocase subunit SecY [Pseudomonas extremaustralis
14-3 substr. 14-3b]
gi|229364749|emb|CAY52731.1| preprotein translocase SecY subunit [Pseudomonas fluorescens SBW25]
gi|311282428|gb|EFQ61026.1| preprotein translocase SecY subunit [Pseudomonas fluorescens WH6]
Length = 442
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 256/426 (60%), Gaps = 29/426 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSVGLAG 140
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ DF +V +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP +
Sbjct: 141 QGVAFTGDFGFHFV--AVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +++
Sbjct: 199 GQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNIL 378
+LP KVN +GV+P IF++S L P +L + G + L+ + ++ PG P NIL
Sbjct: 259 HLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSENMGWLQDLSQSIAPGQ----PLNIL 314
Query: 379 L----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
L I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++
Sbjct: 315 LFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTLFGAL 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYD 493
++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + +
Sbjct: 375 YMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKAN 432
Query: 494 IDSYGS 499
+ YGS
Sbjct: 433 LKGYGS 438
>gi|402570856|ref|YP_006620199.1| protein translocase subunit SecY [Desulfosporosinus meridiei DSM
13257]
gi|402252053|gb|AFQ42328.1| protein translocase subunit secY/sec61 alpha [Desulfosporosinus
meridiei DSM 13257]
Length = 428
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 243/412 (58%), Gaps = 20/412 (4%)
Query: 92 KLLGYLALS----RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
K +GY L R+G +IP+ VN + S+++ +D+ SGG RL + +L I
Sbjct: 17 KKIGYTLLMFLIFRIGAHIPIPFVNHDILKDMFGSGSMMNFMDTISGGSFKRLTVFALSI 76
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + P L+ L K EG+ GRKK+ QYTRY++V +QA G +R
Sbjct: 77 TPYITASIILQLLTIVIPSLERLSK-EGDYGRKKITQYTRYSTVALGFIQAFGLTYGIRS 135
Query: 208 YVNDFS--TDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ S W L +LT G+AF ++GE I++ +GNG SL+IF I+S +P++
Sbjct: 136 ALTIPSPAMQWPTYLLIALVLTAGTAFLMWVGEAITEKGIGNGISLIIFAGIVSRVPSAL 195
Query: 264 GRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
++ E + G N + + ++I + + G++YVQE +R++ + YA R R +S
Sbjct: 196 A-SLWEMLRVGEINALSIIGLLIIVVFITAGVIYVQEGQRRVTVQYAKRVVGRRVYGGQS 254
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAALKKAAVALNPGGSFYLPTNIL 378
+++P KVN +GV+P+IF+ S LA P T+A +T G A ++N G +P +L
Sbjct: 255 SHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFVSTWFSMN-GSITSIPYLLL 313
Query: 379 ---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT + +P DV++ LK+ G IP +RPG+ TA +L VL+RI++ G +F
Sbjct: 314 YGALILFFTYFYTSITFNPVDVADNLKKYGGFIPGLRPGRPTAEYLTKVLNRITLAGGLF 373
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA++A P ++ T L F GTS+LI+VG A DT ++++++++S+ Y+
Sbjct: 374 LALIAVLPTLVIGLTGLKNIY-FGGTSLLIVVGVALDTMKQIESQLMSRHYQ 424
>gi|297545310|ref|YP_003677612.1| preprotein translocase subunit SecY [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843085|gb|ADH61601.1| preprotein translocase, SecY subunit [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 418
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 232/395 (58%), Gaps = 9/395 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G++ + L Q L D SGG I ++ I P+INA I+
Sbjct: 25 LVIFRLGSHIPVPGIDSKVIANILGQGQLFGFFDIISGGAFSSFTIFAMSITPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + LR V + T +
Sbjct: 85 MQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLRKAVIN-PTFF 142
Query: 217 VLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG- 274
LT + + LT G+AF ++GERI++ +GNG+SL+IF IIS +P T AE + G
Sbjct: 143 SLTVIVITLTAGTAFLMWLGERITENGIGNGSSLIIFAGIISRIPNMIYMT-AEYVRAGT 201
Query: 275 -NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 333
N G +++ +L+++ I+ E +R+IP+ YA R R +S ++P ++N +GV
Sbjct: 202 ANIFGAIAFVVAELLMIVLIILATEGQRRIPVQYAKRVVGRKVYGGQSTHIPIRINMAGV 261
Query: 334 MPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+PIIF+ S L P LA F ++ L+ G Y +ILLI F Y+YT +
Sbjct: 262 IPIIFALSLLQFPQQLATFFPRSSFYNFVQRWLSTSGLIYNILDILLIIGFTYFYTAVIF 321
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P ++S+ LK+ G IP +RPG+ T +L +L+R++ +G++FLA +A P ++ + T L
Sbjct: 322 NPVEISDNLKKYGGFIPGIRPGRPTTEYLTKILNRVTFVGALFLAFIATMPVILMRITGL 381
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI VG A DT ++V+ +I + Y+
Sbjct: 382 QLY--FGGTALLIAVGVALDTMKQVEGHLIMRNYQ 414
>gi|414153591|ref|ZP_11409914.1| Protein translocase subunit SecY [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454989|emb|CCO07818.1| Protein translocase subunit SecY [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 419
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 238/410 (58%), Gaps = 16/410 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L L L R+G +IP+ G+N AF L + LL D SGG I ++
Sbjct: 14 LRSKLLFTLAMLFLFRVGAHIPVPGINPAAFADLLTKGQLLGFFDVISGGAFKNASIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P L+ L K EGE GRKK+ QYTRY + A +QAIG + L
Sbjct: 74 SITPYINASIIMQLLTVVIPHLERLAK-EGEEGRKKITQYTRYFTAVLAFIQAIGMSVAL 132
Query: 206 R-PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ VN +++L ++T T G+ +IGE+I++ +GNG SLLIF I+S +PA+
Sbjct: 133 KGALVNPTVLNYLLVAITF-TAGTVLLMWIGEQITEKGIGNGISLLIFAGIVSRIPAAL- 190
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGIVYV------QEAERKIPINYASRYTSRSGGL 318
++ + Q G I+ +L+V+G + + QE +R+IP+ YA R R
Sbjct: 191 VSIGQYLQAGT----INILSVLVLVVIGALVIAAVVAVQEGQRRIPVQYAKRVVGRRVYG 246
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNI 377
++++LP KVN +GV+PIIF++S L PG +A F G A GG
Sbjct: 247 GQTSHLPLKVNQAGVIPIIFASSLLMFPGQIASWFAGNAVADWYLKWFAWGGVLNSILYA 306
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+LI F Y+YT + ++P D++E +K+ G IP +RPG+STA ++ ++SRI++ G+VFLA
Sbjct: 307 MLIIGFTYFYTAVIMNPLDMAENIKKYGGFIPGLRPGRSTAEYISKIMSRITLAGAVFLA 366
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++A P +I T + F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 367 VIAILPNIILTLTRIPNVY-FGGTALLIVVGVALDTMKQIESHLLMRSYQ 415
>gi|229815752|ref|ZP_04446077.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
gi|229808668|gb|EEP44445.1| hypothetical protein COLINT_02801 [Collinsella intestinalis DSM
13280]
Length = 428
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 250/427 (58%), Gaps = 29/427 (6%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAF------VGNLDQNSLLSTLDSFSGGGIGR 139
L GK L + L + R+G ++P+ G+ +A G+ + ++ L+ FSGG +
Sbjct: 14 LRGKILFTIAMLVVYRIGAHVPVPGIPFQAMSGLFQSAGDTFASGAMALLNLFSGGALSY 73
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
+ + SLGI+P+I + I+ Q+L + P L +L REGE G+ K+ QY+RY ++G A++ ++
Sbjct: 74 VSVFSLGIMPYITSSIIMQMLQAVVPSLHEL-AREGEVGQTKITQYSRYLTLGLALLNSV 132
Query: 200 GQVLYLRPYVNDFS------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
G + + + F+ + + V LT G+ +IGE I+ +GNG SL+IF
Sbjct: 133 GYLFLFKSFGIQFNGAGAPEIIFDIMIVGTLTAGAMLIMWIGELITQRGIGNGMSLIIFA 192
Query: 254 SIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRY 311
+I++ LP + + ++ + GN + T++I ++L + IVY++ +R+IP+ YA R
Sbjct: 193 NIMAGLP----QAIFQSIEGGNMGVITTLVILVVILCVIPFIVYLERGQRRIPVQYAKRV 248
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGS 370
R +S YLP KVN++GV+PIIF+++ L P LA F + ++ A AL+ G
Sbjct: 249 VGRRIMGGQSTYLPIKVNTAGVIPIIFASALLYFPAQLAVFFPNVGWMQAFAGALSSGWI 308
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
++ N++LI FF Y+YT + +PD+ +E LK+QG IP VRPGK TA ++K L++I++
Sbjct: 309 NWI-LNVVLIVFFAYFYTSMVFNPDETAENLKKQGGFIPGVRPGKQTAHYIKNALNKITL 367
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
++FLA +A P+++ T+ + F GTSVLI+VG DT KV+++ ++
Sbjct: 368 PSAIFLACIAIVPSIVFSFTNNALIQAFGGTSVLIMVGVVMDTIDKVESQ--------LK 419
Query: 491 FYDIDSY 497
YD D +
Sbjct: 420 MYDYDGF 426
>gi|289550163|ref|YP_003471067.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
HKU09-01]
gi|315659207|ref|ZP_07912071.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|385783738|ref|YP_005759911.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
N920143]
gi|418415058|ref|ZP_12988265.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635872|ref|ZP_13198230.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|289179695|gb|ADC86940.1| Preprotein translocase secY subunit [Staphylococcus lugdunensis
HKU09-01]
gi|315495632|gb|EFU83963.1| preprotein translocase subunit SecY [Staphylococcus lugdunensis
M23590]
gi|339893994|emb|CCB53241.1| preprotein translocase SecY subunit [Staphylococcus lugdunensis
N920143]
gi|374841357|gb|EHS04830.1| preprotein translocase, SecY subunit [Staphylococcus lugdunensis
VCU139]
gi|410875831|gb|EKS23746.1| preprotein translocase subunit secY [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 430
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 240/407 (58%), Gaps = 16/407 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L L + ++G YIP GVN E F + + L++F GG + I ++GI+P+I A
Sbjct: 22 LAMLIIFKIGTYIPAPGVNPEPFAHQGSDQGVAALLNTFGGGALKNFSIFAMGIMPYITA 81
Query: 154 QIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY---- 208
IV QLL I PK + K +GE G++K+ TRY ++ A VQ+IG Y
Sbjct: 82 SIVMQLLQMDIVPKFSEWAK-QGEVGKRKLSNVTRYFAIILAFVQSIGMAFQFNNYLGGK 140
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
+N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LP+S +
Sbjct: 141 LVINQSVMSYLLIAI-VLTTGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPSSIIQF 199
Query: 267 VAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
+AF + ++ + +++ ILL +G +YV EA+RKIPI YA + +++ G Q +
Sbjct: 200 AQQAFVGNDDTTLAWLKVIGLVVGLILLTIGAIYVLEAKRKIPIQYAKKQSAQRLGSQ-A 258
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA-AVALNPGGSFYLPTNILLI 380
YLP KVNS+GV+P+IF+ + LP TL F A + + NP ++ + ++LI
Sbjct: 259 TYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQTISQTANPSNTYGMIVYVVLI 318
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG T ++ VL R++ +GS+FLA++A
Sbjct: 319 IAFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGDQTKKYITKVLYRLTFVGSIFLAVIA 378
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 379 ILPILATKFMSLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 425
>gi|387928090|ref|ZP_10130768.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
gi|387587676|gb|EIJ79998.1| preprotein translocase subunit SecY [Bacillus methanolicus PB1]
Length = 431
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 253/426 (59%), Gaps = 32/426 (7%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G + K L L L + R+G +IP+ VN E D+ ++ L++F GG + I
Sbjct: 12 GEIRRKILFTLFMLIVFRIGAFIPVPNVNAEILKVQ-DELNVFGVLNTFGGGALKNFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ- 201
++GI+P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ ++QA G
Sbjct: 71 AMGIMPYITASIIVQLLQMDVVPKFTEWSK-QGEVGRRKLAQFTRYFTIVLGLIQAFGMS 129
Query: 202 ---------VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+L P + T ++L ++ +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 130 YGFNNMSRGMLIKNPGI----TTYLLIAI-VLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 253 TSIISYLPASFGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPIN 306
I++ +P++F + A+ F++ G + L II+ I+L ++G++++Q+A RKIPI
Sbjct: 185 AGIVAGIPSTFNQIYAQQFENAGEQLFLRIIIVVLIVLAVIAIIVGVIFIQQALRKIPIQ 244
Query: 307 YASRYTS-RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKA 361
YA R + R+ + +S +LP KVNS+GV+P+IF+ S + P T+A F G ++K
Sbjct: 245 YAKRMAAGRNPAVGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQNDVTLWIQKT 304
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
NP G + + LI F Y+Y F+Q++P+ V+E LK+QG IP +RPGK+T +L
Sbjct: 305 FDYTNPIGMIFY---VALIVAFTYFYAFIQVNPEQVAENLKKQGGYIPGIRPGKNTQEYL 361
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VL R++++GS+FLA +A P + L GTS+LI+VG A +T ++++A++
Sbjct: 362 TRVLYRLTLVGSLFLAFIAVLPVFFIKFAGLPQSAQIGGTSLLIVVGVALETMKQLEAQL 421
Query: 482 ISQKYK 487
+ + YK
Sbjct: 422 VKRHYK 427
>gi|269124018|ref|YP_003306595.1| preprotein translocase subunit SecY [Streptobacillus moniliformis
DSM 12112]
gi|268315344|gb|ACZ01718.1| preprotein translocase, SecY subunit [Streptobacillus moniliformis
DSM 12112]
Length = 437
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 247/415 (59%), Gaps = 19/415 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L LG ++R+G++IP+ G+N E F ++L L+ F+GG + R I SL
Sbjct: 20 LRKRVLFTLGCFLVARIGVHIPVPGINMELFRDFTGGSTLAQFLNLFTGGAVQRASIFSL 79
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI P+INA IVFQ+L + PK++++QK EG +KV Q+TRY ++ + Q+ G L L
Sbjct: 80 GITPYINASIVFQILGVLWPKIEEMQK-EGGKEAEKVTQWTRYLTIAITLFQSTGLALIL 138
Query: 206 RP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+ V D T ++LTSV L+T G+AF ++ ERIS +GNGTS+LIF I+S LP
Sbjct: 139 QSNNLVRDPGTTFILTSVVLITGGTAFLMWLSERISIKGIGNGTSMLIFLGIVSNLPQVV 198
Query: 264 GRTVAE--AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ-- 319
T+++ G +G +++I+ +++++ +V++Q ER+IPI Y + + G Q
Sbjct: 199 RSTISQLTTVDKGTILGYSSLILFILIIII-MVFIQLGERRIPIQYVGKSSRGVGNSQAT 257
Query: 320 ---RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN---PGGSFYL 373
R YLP K+N++GVMPIIF++ +A+P + I K A LN P G YL
Sbjct: 258 VVGRKTYLPIKINTAGVMPIIFASMIMAVPSAIIPL--IKDQSKQAYLLNLFGPKGWAYL 315
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ +LI F+++YT + DP+ +++ LK+ G SIPL R GK T+ FL+ V +RI+ +
Sbjct: 316 ISTAVLIVLFSFFYTAIVFDPEKIADSLKQSGGSIPLKRAGKETSDFLEYVATRITFGTA 375
Query: 434 VFLAILAAGPAV-IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLAIL P + ++ G GTS+LILVG A + + + + + +QKYK
Sbjct: 376 IFLAILGILPNIWFGYVLNIPVMLG--GTSLLILVGVAVELIQNIDSHMATQKYK 428
>gi|210623208|ref|ZP_03293647.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
gi|210153745|gb|EEA84751.1| hypothetical protein CLOHIR_01597 [Clostridium hiranonis DSM 13275]
Length = 422
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 240/406 (59%), Gaps = 11/406 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L + + R+G IP+ G++ ++ N+LLS + F+GG + +LGI
Sbjct: 17 KLLYTLMMVVVFRIGTTIPVPGIDTSIIKQMVEGNNLLSLYNMFTGGAFSNFTLFALGIG 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRP 207
P+I A I+ QLL L++LQK GE G+KK+ +YTR ++ A VQAIG L +R
Sbjct: 77 PYITASIIIQLLTVGFESLKELQK-SGEEGKKKMDKYTRCTALALAFVQAIGITLGIVRS 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ + ++ T + L S +IG+RI++ LGNG+S++IF IIS +P G +
Sbjct: 136 ALKSDNVFFITTVIITLVSASMMVMWIGDRITEKGLGNGSSVIIFVGIISRIPID-GIAI 194
Query: 268 AEAFQDG-NYIGLATIIISFILL-VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
A + G I A +++ ILL +LG+ ++QEA RKIP+ YA R R +S+++P
Sbjct: 195 ANQIKSGATPIWAAILLVVVILLTILGVTFIQEATRKIPVQYAKRVVGRKMYGGQSSHIP 254
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA----AVALNPGGSFYLPTNILLIA 381
KVN SGVMPIIF++S LA+P T+A F G A + + A G Y ILLI
Sbjct: 255 MKVNQSGVMPIIFASSILAMPQTIAMFMGTDAQQFVQQWLSGATEQGFWIYRSIEILLII 314
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF+Y+YT + + +D+++ +K G IP +RPGK T +L +LSR+++ G+ FL ++A
Sbjct: 315 FFSYFYTTISFNVEDITKNMKNGGGFIPGIRPGKPTEDYLSRILSRLTLAGAAFLGVIAM 374
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
PA+I T +L+ AGTS+LI+VG A + R++++ ++ + Y+
Sbjct: 375 IPALI--THYLSLPMSLAGTSLLIVVGVALELKRQLESNLVMRNYQ 418
>gi|344337589|ref|ZP_08768523.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
gi|343802542|gb|EGV20482.1| preprotein translocase, SecY subunit [Thiocapsa marina 5811]
Length = 450
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 244/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R+G +IP+ GVN EA DQN S+L + FSGG + R +
Sbjct: 21 LRARLLFVVGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERASLF 80
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + PKL+ L K+EGE+GR+K+ QYTRY +V A QA+G +
Sbjct: 81 ALGIMPYISASIIMQLMTSVVPKLEQL-KKEGESGRRKITQYTRYGTVVLATFQAVGISM 139
Query: 204 YLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
L+ V+ +V T+ L G+ F ++GE+I++ +GNG SL+IF I+
Sbjct: 140 ALQGQTAGGSALVSHAGMGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 199
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LPA+ G T+ E + G LA + + + L + +V+V+ +R+I +NYA R R
Sbjct: 200 AGLPAALGGTL-ELARTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNYARRQQGR 258
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGS 370
+S +LP K+N +GV+P IF++S + PGTL ++ G + L L+PG
Sbjct: 259 KMMQAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSSEDMRWLADITSKLSPGEP 318
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L + D ++ LKR GA IP +RPG+ TA ++ TV++R++
Sbjct: 319 IYVLLYAAAIIFFCFFYTALVFNAKDTADNLKRSGAFIPGIRPGEQTARYIDTVMTRLTA 378
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 379 AGAIYITAVCLLPEFLIVGYNVPFY--FGGTSLLIVVVVVMDFMAQVQAHLMSHQYEGL 435
>gi|270157890|ref|ZP_06186547.1| preprotein translocase SecY subunit [Legionella longbeachae D-4968]
gi|289163850|ref|YP_003453988.1| preprotein translocase, SecY subunit [Legionella longbeachae
NSW150]
gi|269989915|gb|EEZ96169.1| preprotein translocase SecY subunit [Legionella longbeachae D-4968]
gi|288857023|emb|CBJ10837.1| preprotein translocase, SecY subunit [Legionella longbeachae
NSW150]
Length = 444
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 250/410 (60%), Gaps = 15/410 (3%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
F +LG L + RLG +IP+ G++ R A N QN++ + FSGG + R+ + ++GI
Sbjct: 25 FFVVLGIL-VYRLGAHIPVPGLDPARLANFFNEQQNTIFGLFNMFSGGALSRVTVFAIGI 83
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL ++PKL+ L K+EGE+GR+K+ QYTRY ++ +I Q++G +L
Sbjct: 84 MPYISASIILQLFTVVSPKLEQL-KKEGESGRRKINQYTRYLTLLLSIFQSLGMARWLAG 142
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
D+ T+V L G+ F ++GE+I++ +GNG SL+IF+ I+S +P +
Sbjct: 143 QQIALQADFSFYFTAVVTLVTGTMFLMWLGEQITEKGVGNGISLIIFSGIVSSMPTAIA- 201
Query: 266 TVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+V + ++G + L I + +++ +V+++ A+R+I +NYA R R ++++
Sbjct: 202 SVLQQVKEGQMQALTLVIIAVVVVVVTGFVVFMERAQRRIRVNYAQRTQGRKVYAAQTSH 261
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL 379
LP K+N SGV+P IF++S + LP TLA+F G+ L +AL+PG YL +
Sbjct: 262 LPLKINMSGVIPPIFASSIILLPATLAQFFSHTKGMGWLADVGMALSPGQPLYLIVYAVA 321
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF ++Y L +P D ++ LK+ GA IP +RPG+ T ++ V++R++ +GS++L ++
Sbjct: 322 IIFFAFFYAALVFNPKDTADNLKKSGAYIPGIRPGEQTTKYIDAVMTRLTFVGSIYLVLV 381
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ T H+ + F GTS+LI+V D +VQA +++Q+Y ++
Sbjct: 382 CLLPQILMYTWHVPFY--FGGTSLLIIVVVIMDFVAQVQAHLMTQQYDSL 429
>gi|15965129|ref|NP_385482.1| preprotein translocase subunit SecY [Sinorhizobium meliloti 1021]
gi|334315915|ref|YP_004548534.1| preprotein translocase subunit SecY [Sinorhizobium meliloti AK83]
gi|384529087|ref|YP_005713175.1| preprotein translocase subunit SecY [Sinorhizobium meliloti BL225C]
gi|384536633|ref|YP_005720718.1| preprotein translocase subunit SecY [Sinorhizobium meliloti SM11]
gi|407720316|ref|YP_006839978.1| preprotein translocase subunit SecY [Sinorhizobium meliloti Rm41]
gi|418404883|ref|ZP_12978321.1| preprotein translocase subunit SecY [Sinorhizobium meliloti
CCNWSX0020]
gi|433613147|ref|YP_007189945.1| preprotein translocase, SecY subunit [Sinorhizobium meliloti GR4]
gi|15074309|emb|CAC45955.1| Preprotein translocase subunit SecY [Sinorhizobium meliloti 1021]
gi|333811263|gb|AEG03932.1| preprotein translocase, SecY subunit [Sinorhizobium meliloti
BL225C]
gi|334094909|gb|AEG52920.1| preprotein translocase, SecY subunit [Sinorhizobium meliloti AK83]
gi|336033525|gb|AEH79457.1| Preprotein translocase secY subunit [Sinorhizobium meliloti SM11]
gi|359501147|gb|EHK73771.1| preprotein translocase subunit SecY [Sinorhizobium meliloti
CCNWSX0020]
gi|407318548|emb|CCM67152.1| preprotein translocase subunit SecY [Sinorhizobium meliloti Rm41]
gi|429551337|gb|AGA06346.1| preprotein translocase, SecY subunit [Sinorhizobium meliloti GR4]
Length = 446
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 253/437 (57%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPDAFAQAFQGQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGAMQAYGIAVGLESGSGLVNDPGWFFRISTVISLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I++ LP++ T+ + G L+T +I++ I++V+G IV+V
Sbjct: 183 GIGNGISLIIFAGIVAALPSALAGTL----ELGRTGALSTPLILAIIVMVVGVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP TLA F A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANTA 298
Query: 357 ALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
+ A A L G Y+ +IAFF ++YT + +P D ++ LK+ G +P +R
Sbjct: 299 TMPGWATAIVGALAHGQPLYMILYGAMIAFFAFFYTAIVFNPKDTADNLKKHGGFVPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P ++ T + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVIGAIYLVFVCILPEILISQTGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|297717866|gb|ADI50076.1| preprotein translocase SecY subunit [Candidatus Odyssella
thessalonicensis L13]
Length = 435
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 238/405 (58%), Gaps = 18/405 (4%)
Query: 97 LALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R G YIPL GVN ++ + LD FSGG I R+ + +L I+P+I+A
Sbjct: 34 LIVYRFGTYIPLPGVNPLVIQEFAAMNSGGIFGILDMFSGGAISRMTVFALNIMPYISAS 93
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST 214
I+ QL+ ++P L+ L K+EGE+GRKK+ QYTRY +V A VQA G + L V ST
Sbjct: 94 IIVQLMTSVSPHLEAL-KKEGESGRKKLNQYTRYGTVLLASVQAFGIAVGLEKMVVGTST 152
Query: 215 D-------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ +++ LT G+ F ++GE+I+ LGNGTSL+I++ I++ LP SF +T
Sbjct: 153 AVLNPGFFFKFSTIVTLTGGTLFIMWLGEQITSRGLGNGTSLIIYSGIVANLPQSFAKTF 212
Query: 268 AEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQ-RSAYLP 325
A G+ +I+ + +V+ +V++++A+R+I I Y R + Q ++ +LP
Sbjct: 213 ISARTGAISNGILVLILLMVAVVIAYVVFMEKAQRRILIQYPKRQVAADRPAQAQTTHLP 272
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGI----AALKKAAVALNPGGSFYLPTNILLIA 381
K+NSSGV+P IF+ S L P T+A F+G + L A + G Y+ + LI
Sbjct: 273 LKLNSSGVIPPIFANSLLLFPATIAGFSGSMNPDSILGMIATYMAHGKPLYMICSTALII 332
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF ++YT L +P + +E L++ G IP +RPGK+TA ++ VL+R++V+GS++LA +
Sbjct: 333 FFAFFYTALVFNPTETAENLRKMGTFIPGIRPGKATADYIDYVLTRLTVIGSIYLASICL 392
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
P +I L + F GTS+LI+V DT ++Q+ +++ +Y
Sbjct: 393 LPELILSKVALPFY--FGGTSILIVVSVTIDTISQMQSHLVAHQY 435
>gi|297618364|ref|YP_003703523.1| preprotein translocase subunit SecY [Syntrophothermus lipocalidus
DSM 12680]
gi|297146201|gb|ADI02958.1| preprotein translocase, SecY subunit [Syntrophothermus lipocalidus
DSM 12680]
Length = 421
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 234/417 (56%), Gaps = 24/417 (5%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G L K L LG L + RLG +IP+ G+N + F L N L D SGG R I
Sbjct: 12 GDLRNKLLFTLGMLLVFRLGAHIPVPGINADVF-AKLLTNQLFGFYDIISGGAFKRFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
++ I P+INA I+ QLL + PKL+ LQK EGE GRKK+ QY RY +V +QAIG +
Sbjct: 71 AMSITPYINASIIMQLLTVVIPKLEQLQK-EGEEGRKKITQYVRYGTVILGFIQAIGMAI 129
Query: 204 YLRPYVNDFSTDWV---LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+ Y + L LT G+A +IGE I++ +GNG SL+IF I++ +P
Sbjct: 130 AMGRYPGVLHKPGIGAYLIIAISLTAGTALLMWIGEMITEKGIGNGISLIIFAGIVARIP 189
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFILLVL----GIVYVQEAERKIPINYASRYTSRSG 316
+ T+ E + G IG I+ SF+++ L +V V E +R+IPI YA R R
Sbjct: 190 SGL-NTMVELLKAGT-IGFFNIL-SFVVIALVIISALVAVNEGQRRIPIQYAKRVVGRRV 246
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT- 375
+S +LP +VN GV+PIIF S + P T+A + K+ V+ F+ T
Sbjct: 247 YGGQSTFLPLRVNMGGVIPIIFGMSIMMFPATIASW-----FPKSGVSTFINTYFHFGTV 301
Query: 376 --NIL---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
NIL LI FF Y+Y + +P DV++ +K+ G IP +RPG+ TA ++ VLSR++
Sbjct: 302 LYNILYALLIFFFTYFYVAIIFNPADVADNIKKYGGFIPGIRPGRPTADYIDRVLSRLTF 361
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G +FLA +A P + + T +T+ F GT++LI+VG A DT ++++A ++ + Y+
Sbjct: 362 AGGIFLAFIAILPNFVIKVTGITSLY-FGGTALLIVVGVALDTMKQLEAHLLLRSYE 417
>gi|418575476|ref|ZP_13139627.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379326096|gb|EHY93223.1| preprotein translocase subunit SecY [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 407
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 237/403 (58%), Gaps = 14/403 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + ++G YIP GVN AF + L++F GG + I ++GI+P+I A IV
Sbjct: 2 LVIFKIGTYIPAPGVNPAAFDSQQGSQGVTDLLNTFGGGALKNFSIFAMGIMPYITASIV 61
Query: 157 FQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-----VN 210
QLL I PK + K +G+AGRKK+ TRY ++ A +Q+IG Y +
Sbjct: 62 MQLLQMDIVPKFSEWAK-QGDAGRKKLNNVTRYFAIVLAFIQSIGMAFQFNNYLKGQLIM 120
Query: 211 DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
D S L +LT G+AF ++GE+I+ +GNG S++IF I+S LP+S + +A
Sbjct: 121 DQSILSYLLIAVVLTAGTAFLIWLGEQITQFGVGNGISIIIFAGILSSLPSSLIQFYQQA 180
Query: 271 F--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
F QD ++ + +II ILL +G +YV +A RKIPI YA + +++ G Q + YLP
Sbjct: 181 FVGQDDTSMAWLKVIGLIIGMILLTVGAIYVLQAIRKIPIQYAKKQSAQRLGSQ-ATYLP 239
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILLIAFFN 384
KVNS+GV+P+IF+ + LP TL F A+ +K + NP + + ++LI F
Sbjct: 240 LKVNSAGVIPVIFAMAFFLLPRTLTLFFPDASWAQKVSDVANPSNNIGMIVYVVLIIAFA 299
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA++A P
Sbjct: 300 YFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITRVLYRLTFVGSIFLAVIAILPI 359
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ + L GTS+LI++G A +T + ++A++ + Y+
Sbjct: 360 IATKVMSLPQSIQVGGTSLLIVIGVAIETMKSLEAQVSQKDYR 402
>gi|268316428|ref|YP_003290147.1| preprotein translocase subunit SecY [Rhodothermus marinus DSM 4252]
gi|262333962|gb|ACY47759.1| preprotein translocase, SecY subunit [Rhodothermus marinus DSM
4252]
Length = 438
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 243/425 (57%), Gaps = 45/425 (10%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV--------NREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
+ L LG L + RLG Y+ L GV NR+A N+L +D F GG +
Sbjct: 20 RVLYTLGLLVVYRLGTYVTLPGVDAHILAEVNRQA-----GTNNLFGLIDLFVGGAFSQA 74
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
GI +LGI+P+I A I+ QL+ + P Q LQ REGE GR+K+ Q TRY +V +QA+G
Sbjct: 75 GIFALGIMPYITASIIIQLMGAVVPYFQKLQ-REGEEGRRKITQLTRYLTVAITALQAVG 133
Query: 201 QVLYLR-----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+ LR + ++L +V +LT G+ F ++GERI++ +GNG SL+I SI
Sbjct: 134 YAINLRYGATGQAIVVSPAFFMLIAVIVLTAGTVFVMWLGERITENGIGNGISLIIMVSI 193
Query: 256 ISYLPASFGRTVAEAF--QDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++LP + V F +D +I L + + F+++ G+V V + R+IP+ YA R
Sbjct: 194 IAFLP----QAVYNEFTLKDNLFIVLLELAV-FVVITAGVVLVTQGTRRIPVQYAKRVVG 248
Query: 314 RS--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
R GG+ + YLP +VN++GVMPIIF+ S + +P T+A F + + GSF
Sbjct: 249 RRVYGGV--TQYLPLRVNAAGVMPIIFAQSIMFVPATIATFF------PGSDFMQQFGSF 300
Query: 372 --------YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
Y LL+ FF Y+YT + ++P ++++ LKRQG IP VRPGK T+ F+ T
Sbjct: 301 FSDISGWGYSSLFFLLVVFFTYFYTAIAVNPREMADTLKRQGGFIPGVRPGKQTSEFIDT 360
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAF-RGFAGTSVLILVGCATDTARKVQAEII 482
+L+RI++ G++FL I+A PA + F F GTS+LI+VG DT +++++ ++
Sbjct: 361 ILTRITLPGAIFLGIVAIIPAFAMRAGVTAGFAHFFGGTSLLIIVGVMLDTLQQIESHLL 420
Query: 483 SQKYK 487
+ Y+
Sbjct: 421 MRHYE 425
>gi|221195589|ref|ZP_03568644.1| preprotein translocase, SecY subunit [Atopobium rimae ATCC 49626]
gi|221184776|gb|EEE17168.1| preprotein translocase, SecY subunit [Atopobium rimae ATCC 49626]
Length = 426
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 239/400 (59%), Gaps = 19/400 (4%)
Query: 101 RLGIYIPLGGVNREAFVGN----LDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R G +P+ G + + + L N ++ L+ FSGG + + + SLGI+P+I AQI+
Sbjct: 29 RFGARLPVPGAPFQDMLAHYQNGLASNGAMAVLNLFSGGALSHMSVFSLGIMPYITAQII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST-- 214
Q++ + P L +L K +GE+G++K+ QYTRY +V A++ A+G + + Y F+
Sbjct: 89 LQMMQSVIPSLGELAK-DGESGQRKITQYTRYLTVALALLNAVGYLFMFKSYGVSFANMG 147
Query: 215 ------DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ +L T+L +G+ ++GE I+ +GNG SL+IFT+I++ LPA+ V+
Sbjct: 148 GVPEALENILVVFTML-VGAIIIMWLGEVITQRGVGNGMSLIIFTNIMAGLPAAL---VS 203
Query: 269 EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 328
GN I I+ +L+V IVYV+ +R+I I YA R R +S YLP KV
Sbjct: 204 SITTRGNVILTVATIVIMLLIVPIIVYVERGQRRISITYAKRVVGRKLMGGQSTYLPIKV 263
Query: 329 NSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYY 387
N++GV+PIIF+++ L LP +A F + ++ A AL+ G + ++L I FF Y+Y
Sbjct: 264 NTAGVVPIIFASAILYLPAQIAIFFPNVGWVQSFASALSKGWVNW-ALSVLFIVFFAYFY 322
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T + +P++ ++QLK+QG IP VRPG +TA ++K+V+ ++++ G++F+A+LA P++I
Sbjct: 323 TSMVFNPEETADQLKKQGGFIPGVRPGAATANYIKSVIDKVTLPGAIFMAVLAVVPSIIF 382
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T + F GTSVLI+VG A DT +++ + Y+
Sbjct: 383 WFTGDPLIQAFGGTSVLIMVGVAMDTLASIESHLKMHNYE 422
>gi|244539088|dbj|BAH83131.1| protein translocase subunit SecY [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 433
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 248/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++ + + R+G YIP+ G+N L+Q +++ L+ FSGG + R I
Sbjct: 9 LKHRVLFVITAIIIFRIGSYIPIPGINTTVLSKLLNQQNGTIIDMLNMFSGGALSRASIF 68
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG--- 200
+LGI+P+I+A ++ QLL+ +NP L D+ K++GE GR K+ QYTRY+++ AI+Q++G
Sbjct: 69 ALGIMPYISASVIIQLLSIVNPTLADI-KKDGEIGRLKINQYTRYSALALAILQSVGITT 127
Query: 201 ---QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
++ + + + + + SV L G+ F ++GE+++D +GNG S+LIFT II+
Sbjct: 128 ALPKIAGIDNLIFNHNMQFYFISVMSLVTGTIFLMWLGEQLTDHGIGNGISILIFTGIIA 187
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G T+ + Q D + L I+I ++ +V+V+ +R+I ++YA R R
Sbjct: 188 SLPPAIGHTLERSRQGDLQFTELLLIVILIFAIIFFVVFVERGQRRIIVHYAHRQQGRRP 247
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFY 372
Q +++LP K+N +GV+P IF++S + P T+A + G + L + ++ L PG Y
Sbjct: 248 YYQPTSHLPLKINMAGVIPAIFASSIILFPATIASWFGRSMNNYLLTQISLYLQPGQLIY 307
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF ++YT L +P D ++ LK+ GA IP +RPG+ TA ++ T+++R++++G
Sbjct: 308 LLLYSTAIVFFCFFYTVLVFNPRDTADNLKKSGAFIPGIRPGEKTARYIDTIMTRLTMIG 367
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++++ + P ++ + + F GTS+LI+V D ++Q I+S KY++
Sbjct: 368 AIYITFICLVPEIMRHAMKVPFY--FGGTSLLIVVVVIIDFISQIQTLIMSSKYES 421
>gi|405351431|ref|ZP_11022914.1| Preprotein translocase secY subunit [Chondromyces apiculatus DSM
436]
gi|397093322|gb|EJJ24045.1| Preprotein translocase secY subunit [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 462
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 246/431 (57%), Gaps = 27/431 (6%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F + F+ L + L LA+ R+GI+I GV+R A +D L+S + F
Sbjct: 20 FANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLF 79
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I LGI+P+++A I+ QLLA + P L+ LQK EG GR+K+ QYTRY ++
Sbjct: 80 SGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQK-EGAGGRQKINQYTRYGTIA 138
Query: 193 FAIVQAIGQVLYL--------------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+IVQ IG +L + V D S + +V LT G+AF ++GERI
Sbjct: 139 LSIVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGERI 198
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQ 297
++ +GNG SL+IF I++ L + + QD + ++ F+L+++ +VYV+
Sbjct: 199 TERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISVAEVLALVVFMLIIIAAVVYVE 258
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
R+IPI YA R R ++ Y P KVN+SGV+P IF+ + L+ P TL T
Sbjct: 259 RGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLG--TWFPF 316
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L+ A+ Y ++++ FF Y+YT L PDDV++ +K+QG IP +RPG+ T
Sbjct: 317 LQGFQRAIEGNLWIYNGLFVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQT 376
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARK 476
A F++ VL+R++ G+++L+++ P+VI + L R F GT++LI+VG A DT ++
Sbjct: 377 AEFIERVLNRLTFGGAIYLSVVCVIPSVI---SGLLGVRFTFGGTALLIVVGVALDTVQQ 433
Query: 477 VQAEIISQKYK 487
++ +IS+ Y+
Sbjct: 434 IEGHLISRNYE 444
>gi|407697592|ref|YP_006822380.1| preprotein translocase subunit SecY [Alcanivorax dieselolei B5]
gi|407254930|gb|AFT72037.1| Preprotein translocase SecY subunit [Alcanivorax dieselolei B5]
Length = 460
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 253/429 (58%), Gaps = 28/429 (6%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPF 150
LLG L + R+G +IP+ G+N + +QN ++L + FSGG + R+ I +LGI+P+
Sbjct: 31 LLGALLVFRIGAHIPVPGMNPDMLEQMFNQNRDTILGLFNMFSGGSLERMSIFALGIMPY 90
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-------QVL 203
I A IV QL+ + P L+ L+K EGE GR+K+ QYTRY +V A+VQ+ G Q +
Sbjct: 91 ITASIVIQLMTAVVPSLEQLRK-EGEQGRRKITQYTRYLTVALALVQSFGVCAGLKSQGI 149
Query: 204 YLRPYVNDFS--TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
L P D + +VT L G+ F ++GE+I++ +GNG S+LIF SI++ LP
Sbjct: 150 TLLPEGADSMQVASFYFVAVTSLVTGTIFLMWLGEQITERGIGNGISMLIFASIVAGLPG 209
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFIL---LVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+ +T A Q +GL +++ F++ ++ G+V+V+ +R+I +NYA R R
Sbjct: 210 AVAQTFESARQ--GELGLLAMLMVFLVAVAVIFGVVFVERGQRRITVNYARRQQGRRVYA 267
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--------ALKKAAVALNPGGS 370
+ ++LP KVN +GV+P IF++S L P +L ++ + L++ + AL PG
Sbjct: 268 AQQSHLPLKVNMAGVIPAIFASSILLFPASLTQWFSDSNPDSWWGMTLRRVSDALLPGTP 327
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ L I FF Y+YT L +P DV++ LK+ GA IP +RPG+ +A ++ TV+ R+++
Sbjct: 328 LYILLFTLAIMFFCYFYTALVFNPKDVADNLKKSGAYIPGIRPGEQSARYIDTVMGRLTL 387
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY-KNI 489
+G+V++ ++ P ++ ++ + G GTS+LI+V D +V + ++S +Y K +
Sbjct: 388 IGAVYMTLVCLLPLGLQAIWNVPFYLG--GTSLLIVVVVVMDFWGQVNSHLMSTQYEKLM 445
Query: 490 EFYDIDSYG 498
+ ++ YG
Sbjct: 446 KKANLKGYG 454
>gi|384081773|ref|ZP_09992948.1| preprotein translocase subunit SecY [gamma proteobacterium HIMB30]
Length = 439
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 250/411 (60%), Gaps = 17/411 (4%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N R A + Q ++LS + FSGG + R+ I +LGI+P+I+A IV Q
Sbjct: 29 RIGAHIPVPGINPDRLADLFEQSQGTILSLFNMFSGGALERMSILALGIMPYISASIVMQ 88
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
LL + P L+ L K+EGEAGR+K+ QYTRY +V A VQ+IG + L + NDF
Sbjct: 89 LLTAVVPTLEAL-KKEGEAGRRKITQYTRYGTVFLATVQSIGVAMGLAGQGIAFTNDFHF 147
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-D 273
+V +V GS F ++GE++++ +GNG SLLIF I++ LP + G++ A Q D
Sbjct: 148 HFV--AVVTFVSGSVFLMWLGEQVTEKGIGNGISLLIFAGIVAGLPGAIGQSAEAARQGD 205
Query: 274 GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 333
N +GL I I + +V +V+++ A+R+I +NYA R + ++LP K+N +GV
Sbjct: 206 LNILGLLAIAIIAVGVVAFVVFMERAQRRITVNYARRQQGNKVFAAQQSHLPLKINMAGV 265
Query: 334 MPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTF 389
+P IF++S L P ++ ++ G+ L+ ++AL PG Y + I FF Y+YT
Sbjct: 266 IPPIFASSLLLFPASIGQWFGQGEGMEWLQDVSLALGPGQPLYYLLFTVGIVFFCYFYTA 325
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L +P DV++ LK+ GA IP +RPG+ +A ++ V+SR++ G+ ++A ++ P + +
Sbjct: 326 LVFNPRDVADNLKKSGAFIPGIRPGEQSANYIDKVMSRLTFWGAAYIAAVSLLPQSLVVS 385
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
+ + F GTS+LI+V D +VQ+ ++S++Y+++ + ++ YGS
Sbjct: 386 FNAPFY--FGGTSLLIVVVVVMDFMSQVQSHLMSRQYESLMKKSNLKGYGS 434
>gi|227499175|ref|ZP_03929310.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
gi|226904622|gb|EEH90540.1| preprotein translocase subunit secY [Acidaminococcus sp. D21]
Length = 418
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 223/389 (57%), Gaps = 5/389 (1%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G IP+ GVN + +L LD FSGG + + I ++ I P+INA I+ QLL
Sbjct: 29 RAGTQIPVPGVNAAMIEQLFNNGNLFGLLDLFSGGALSKFSIFAMSITPYINASIITQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ P L++ K EG G KK+ + RYA+V ++QAIG LR VN+ + LT
Sbjct: 89 TVVIPTLEEWSK-EGAEGAKKINKINRYAAVVLGVIQAIGMAYGLRVAVNNPTFFSYLTI 147
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIG 278
V LT G+ +IGE+I+ +GNG SL+IF IIS LP+ + Q G N
Sbjct: 148 VVSLTAGTILLMWIGEQITARGIGNGISLIIFAGIISRLPSGMA-VMYRYLQAGTINIFN 206
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
L + +L+V+ +V + A RKIP+ YA R R + Y+P KVN +GVMPIIF
Sbjct: 207 LLIFAVLAVLMVMFVVAITVAYRKIPVQYAKRVVGRKMYGGHTTYIPLKVNQAGVMPIIF 266
Query: 339 STSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVS 398
++S L P T+A+F + ++K A L G +LLI FF Y+YT + L+ ++
Sbjct: 267 ASSVLMFPVTIAQFIQVPWVQKVASYLQWGTPLQTTLYVLLILFFTYFYTAVSLNIPEMC 326
Query: 399 EQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGF 458
+ +K+ G IP +RPGK T A+L +++RI++ G+VFLA +A P +I T ++ F
Sbjct: 327 DNIKKYGGFIPGLRPGKPTIAYLDKIMNRITLAGAVFLAFIAVMPNIIVWLTGISGIY-F 385
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKYK 487
GT++LI+VG A DT ++V++ ++ + Y+
Sbjct: 386 GGTALLIVVGVALDTMKQVESMVLMRHYQ 414
>gi|333909687|ref|YP_004483273.1| preprotein translocase subunit SecY [Marinomonas posidonica
IVIA-Po-181]
gi|333479693|gb|AEF56354.1| preprotein translocase, SecY subunit [Marinomonas posidonica
IVIA-Po-181]
Length = 443
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 251/409 (61%), Gaps = 16/409 (3%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLSALFDQNEGTILSLFNVFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QLL ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQ+ + L
Sbjct: 82 LPYISASIIMQLLTVVSPQLEQL-KKEGEAGRRKITQYTRYGTVLLALVQSASMAVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FST +V ++TL G+ F ++GE++++ +GNG S+LIF I++ LP++ GR
Sbjct: 141 QGISFSTGMEFYAVAVVTLVAGTVFLMWLGEQVTEKGIGNGISILIFAGIVAGLPSALGR 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N + L I I I + +V+++ +R+I +NYA R + + ++L
Sbjct: 201 SFESARQGDINILALLLIGILAIATIAFVVFIERGQRRITVNYAKRQQGKKVFAAQKSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLI 380
P KVN +GV+P IF++S L P ++ ++ G+ L+ ++AL PG Y+ + I
Sbjct: 261 PLKVNMAGVIPPIFASSILLFPASIGQWFGQGEGMEWLQNISLALAPGQPLYVLLFAIAI 320
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF ++YT L +P DV++ LK+ GA +P +RPG TA ++ V++R+++ G++++ +++
Sbjct: 321 VFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGDHTARYIDGVMTRLTLFGALYITLVS 380
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + F GTS+LI+V D +VQ+ ++SQ+Y+++
Sbjct: 381 LMPQFFVVAWNVPFY--FGGTSMLIVVVVVMDFMSQVQSHLMSQQYESL 427
>gi|95930502|ref|ZP_01313238.1| SecY protein [Desulfuromonas acetoxidans DSM 684]
gi|95133542|gb|EAT15205.1| SecY protein [Desulfuromonas acetoxidans DSM 684]
Length = 435
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 248/410 (60%), Gaps = 15/410 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L LA+ R+G ++P GVN + + Q +LL + +F+GG + R+ + +LG
Sbjct: 17 RILFTLMMLAVYRVGCHVPTPGVNGQVLASFFEGTQGTLLGMVSAFTGGALQRMTVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL + +Q L K EGE GRK + ++TRY +V ++VQ G + L+
Sbjct: 77 IMPYISASIILQLLTVVFEPVQRLSK-EGEQGRKVITRWTRYGTVLLSVVQGAGIAVGLQ 135
Query: 207 -------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
P V + +V+ +V LT G+AF +IGE+I++ +GNG SL+IF II+ +
Sbjct: 136 SMNVAGDPVVPNQGIGFVILTVFTLTAGTAFIMWIGEQITERGIGNGISLIIFAGIIANM 195
Query: 260 PASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ T+ + G + + I++ +L+++ IV+++ A+R++PI+YA R
Sbjct: 196 PSAIVNTI-RLLRTGAMPPVTMIFILVLMVLVIMAIVFMERAQRRVPIHYAKRVVGMRNL 254
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNI 377
+S++LP K+N SGV+P IF++S + P T+A F + ++K A + P Y +
Sbjct: 255 GGQSSHLPLKINMSGVIPPIFASSIIMFPATVANFVHVEWVQKLAGMMTPSHWLYNVFFV 314
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
I FF Y+YT + +P DV+E +K QG IP VRPGK+T+ +L VLSR++ G+++++
Sbjct: 315 AFIVFFCYFYTAVTFNPVDVAENVKNQGGYIPGVRPGKATSDYLDVVLSRLTFAGAIYVS 374
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ P ++ ++ + F GTS+LI+VG DTA ++++ +IS+ Y+
Sbjct: 375 VVCVLPTMLIGQLNVPFY--FGGTSLLIVVGVGMDTASQIESHLISRSYE 422
>gi|254483418|ref|ZP_05096647.1| preprotein translocase, SecY subunit [marine gamma proteobacterium
HTCC2148]
gi|214036292|gb|EEB76970.1| preprotein translocase, SecY subunit [marine gamma proteobacterium
HTCC2148]
Length = 442
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 257/412 (62%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGV--NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+ N+ A + N +Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 32 RIGTHIPVPGIDPNQLAALFNQNQGTILGLANMFSGGALERMSILALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPYVNDFSTDW 216
L++ + P+L+ L K+EGE+GR+K+ QYTRY +V A++QA G + + + D S +
Sbjct: 92 LMSAVTPQLEQL-KKEGESGRRKISQYTRYLTVVLAVIQATGMTVGMANQGMSYDTSLLF 150
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ ++T L G+ F ++GE+I++ +GNG SLLIF I++ LPA+ G+++ +A Q + N
Sbjct: 151 YVIAITSLVTGAVFMMWLGEQITEKGVGNGISLLIFAGIVAGLPAAIGQSLEQARQGELN 210
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L I+ I ++ IV+++ +R+I +NYA R R +S++LP KVN +GV+P
Sbjct: 211 ILVLLFILALAIAVIYLIVFIERGQRRITVNYAKRQQGRKMYQAQSSHLPLKVNMAGVIP 270
Query: 336 IIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIAFFNYY----Y 387
IF++S L P ++A++ G + L+ AVA+ PG P NILL F + Y
Sbjct: 271 AIFASSILLFPASIAQWFGSSGGADWLQDLAVAIGPGQ----PLNILLFTVFVVFFCFFY 326
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P +V++ LKR GA +P +RPG+ TA ++ VL+R++V GS ++A++ P +
Sbjct: 327 TALMFNPVEVADNLKRSGAFVPGIRPGQQTANYIDGVLTRLTVFGSAYIALVCLMPQFLV 386
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y ++ + ++ +YG
Sbjct: 387 VMWNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYDSVMKKANLKNYG 436
>gi|18378768|gb|AAL68695.1| translocase SecY [Xanthomonas campestris pv. campestris]
Length = 455
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 256/426 (60%), Gaps = 34/426 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G Y+P+ GVN +A + + N ++ + FSGG + R I +L
Sbjct: 22 RLLFVLGALIVYRIGCYVPVPGVNPDAMLSLMQAQGNGIVDMFNMFSGGALHRFSIFALN 81
Query: 147 IVPFINAQIVFQL-LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
++P+I+A IV QL A ++P L+ +QK EGE+GR+K+ QY+R +V A+VQ L L
Sbjct: 82 VMPYISASIVIQLDHAHLSP-LKAMQK-EGESGRRKITQYSRIGAVLLAVVQGGSIALAL 139
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ P V +VLT+V LT G+ F ++GE++++ +GNG SL+IF I++
Sbjct: 140 QNQTAAGGAPVVYAPGMGFVLTAVIALTAGTIFLMWVGEQVTERGIGNGVSLIIFAGIVA 199
Query: 258 YLPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP+ +TV EAF++GN +I L I+I+ + L +V+V+ +R+I +NYA R R+
Sbjct: 200 GLPSGAIQTV-EAFREGNLSFISLLLIVITILAFTLFVVFVERGQRRITVNYARRQGGRN 258
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV--------ALNP 367
+ ++++LP K+N +GV+P IF++S LA P TL+ ++G A A V AL P
Sbjct: 259 AYMNQTSFLPLKLNMAGVIPPIFASSILAFPATLSMWSGQVAPAVAWVRGCSALPNALGP 318
Query: 368 GGSFYLPTNILLIA----FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
G P ++L+ A +F ++YT L + + ++ LK+ GA IP +RPGK+TA ++
Sbjct: 319 GE----PVHMLVFARVDYWFAFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYVDG 374
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS 483
VL+R++ GS++L I+ P ++ T L F GTS+LI V D ++QA ++S
Sbjct: 375 VLTRLTAAGSLYLVIVCLLPEIMR--TQLGTSFHFGGTSLLIAVVVVMDFIAQIQAHLMS 432
Query: 484 QKYKNI 489
+Y+++
Sbjct: 433 HQYESL 438
>gi|347730676|ref|ZP_08863790.1| preprotein translocase, SecY subunit [Desulfovibrio sp. A2]
gi|347520595|gb|EGY27726.1| preprotein translocase, SecY subunit [Desulfovibrio sp. A2]
Length = 437
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 243/406 (59%), Gaps = 17/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA R+G+++P+ GV+ A QN+L D FSGGG+ L + +LGI+P+I+A
Sbjct: 26 LAAYRIGVHVPVPGVDSGALADFFASVQNTLFGLFDMFSGGGLRNLSVFALGIMPYISAS 85
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL ++P+L+ + K EG +GR+K+ QYTRYA+V ++Q G + L
Sbjct: 86 IIIQLLQVVSPELKRMAKEEGASGRRKITQYTRYATVLITVIQGFGIAVGLENMHSPAGA 145
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V D + + ++ LT G+ +IGE+I++ +GNG SL+IF+ I++ +P ++
Sbjct: 146 PVVVDAGWAFRMITIATLTAGTVLIMWIGEQITEKGIGNGISLIIFSGIVAGIPGGIVKS 205
Query: 267 VAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
A+ + G+ + L T ++ +L+ + IV+++ +R+IPI+YA R R +S +
Sbjct: 206 -AQLIKAGD-MSLFTALLVLVLMAVVLGCIVFMERGQRRIPIHYAKRQVGRKMFGGQSTH 263
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFF 383
LP ++N++GV+P IF++S L P T+A F+ L++ A P Y I LI FF
Sbjct: 264 LPLRINTAGVIPPIFASSLLLFPATIASFSANEMLQQVAAWFAPHTVMYNILFISLIVFF 323
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
++YT + DP D++E LK+ G IP +RPG T ++ VL+R+++ G+++++ + P
Sbjct: 324 CFFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTRQYIDRVLTRMTIWGAIYISAICVLP 383
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ + F GTSVLILVG A D +V++ +IS++Y+ +
Sbjct: 384 MILIAQFNVPFY--FGGTSVLILVGVAMDFMSQVESHLISRQYEGL 427
>gi|289579123|ref|YP_003477750.1| preprotein translocase subunit SecY [Thermoanaerobacter italicus
Ab9]
gi|289528836|gb|ADD03188.1| preprotein translocase, SecY subunit [Thermoanaerobacter italicus
Ab9]
Length = 418
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 232/395 (58%), Gaps = 9/395 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G++ + L Q L D SGG I ++ I P+INA I+
Sbjct: 25 LIIFRLGSHIPVPGIDSKVIANILGQGQLFGFFDIISGGAFSSFTIFAMSITPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + LR V + T +
Sbjct: 85 MQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLRRAVIN-PTFF 142
Query: 217 VLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG- 274
LT + + LT G+AF ++GERI++ +GNG+SL+IF IIS +P T AE + G
Sbjct: 143 NLTVIVITLTAGTAFLMWLGERITENGIGNGSSLIIFAGIISRIPNMIYMT-AEYVRAGT 201
Query: 275 -NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 333
N G +++ +L+++ I+ E +R+IP+ YA R R +S ++P ++N +GV
Sbjct: 202 ANIFGAIAFVVAELLMIVLIILATEGQRRIPVQYAKRVVGRKVYGGQSTHIPIRINMAGV 261
Query: 334 MPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+PIIF+ S L P LA F ++ L+ G Y +ILLI F Y+YT +
Sbjct: 262 IPIIFALSLLQFPQQLATFFPRSSFYNFVQRWLSTSGLIYNILDILLIIGFTYFYTAVIF 321
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P ++S+ LK+ G IP +RPG+ T +L +L+RI+ +G++FLA +A P ++ + T L
Sbjct: 322 NPVEISDNLKKYGGFIPGIRPGRPTTEYLTKILNRITFVGALFLAFIATMPVILMRITGL 381
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI VG A DT ++V+ +I + Y+
Sbjct: 382 QLY--FGGTALLIAVGVALDTMKQVEGHLIMRNYQ 414
>gi|335042311|ref|ZP_08535338.1| preprotein translocase secY subunit [Methylophaga
aminisulfidivorans MP]
gi|333788925|gb|EGL54807.1| preprotein translocase secY subunit [Methylophaga
aminisulfidivorans MP]
Length = 451
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 257/439 (58%), Gaps = 29/439 (6%)
Query: 68 AAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SL 125
AAAM S G F G L + L +LG L + R+G ++P+ G++ A +Q ++
Sbjct: 9 AAAMLGS----GKF--GELKSRLLFVLGALIVYRMGTFMPVPGIDPAALAIMFEQQKGTI 62
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
L + FSGG + RL + +LGI+P+I+A I+ QLL ++PKL+ L K+EG AG++K+ QY
Sbjct: 63 LDMFNMFSGGALQRLSVFALGIMPYISASIIMQLLTVVHPKLEQL-KKEGAAGKRKITQY 121
Query: 186 TRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
TRY ++ A QA+G + L V D + +T+V L G+ F ++GE+I
Sbjct: 122 TRYGTLVLATFQALGIAIALESQSASGVNVVIDPGFVFRITAVITLVTGTMFLMWLGEQI 181
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI----V 294
++ +GNG SL+IF I++ LPA+ G T+ E + G A ++I+ I L L + V
Sbjct: 182 TERGIGNGISLIIFAGIVAGLPAAVGGTL-ELARTGQL--HAFLVIALIFLALAVTAFVV 238
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-- 352
+V+ A+R+IP++YA R R + +LP K+N +GV+P IF++S + P T+A +
Sbjct: 239 FVERAQRRIPVHYAKRQQGRKMIAGQVTHLPLKLNMAGVIPPIFASSIILFPATIAGWFG 298
Query: 353 --TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
G+ LK + ++PG Y+ + I FF ++YT L +P + +E L++ GA IP
Sbjct: 299 STDGMGWLKDISTLMSPGQPMYVMAYAVAIVFFCFFYTALVFNPKETAENLQKSGAFIPG 358
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+RPG+ TA ++ TV+ R+++ G++++ + P + + + F GTS+LI+V
Sbjct: 359 IRPGEQTARYIDTVMGRLTLAGAIYITAVCLLPEFLILYWSVPFY--FGGTSLLIIVVVV 416
Query: 471 TDTARKVQAEIISQKYKNI 489
D +VQ+ ++SQ+Y+++
Sbjct: 417 MDFVSQVQSHMMSQQYESL 435
>gi|163851604|ref|YP_001639647.1| preprotein translocase subunit SecY [Methylobacterium extorquens
PA1]
gi|218530413|ref|YP_002421229.1| preprotein translocase subunit SecY [Methylobacterium extorquens
CM4]
gi|240138772|ref|YP_002963244.1| preprotein translocase, membrane component, transport across inner
membrane (general Secretory Pathway) [Methylobacterium
extorquens AM1]
gi|254561372|ref|YP_003068467.1| preprotein translocase, membrane component, transport across inner
membrane [Methylobacterium extorquens DM4]
gi|418058047|ref|ZP_12696028.1| preprotein translocase, SecY subunit [Methylobacterium extorquens
DSM 13060]
gi|163663209|gb|ABY30576.1| preprotein translocase, SecY subunit [Methylobacterium extorquens
PA1]
gi|218522716|gb|ACK83301.1| preprotein translocase, SecY subunit [Methylobacterium extorquens
CM4]
gi|240008741|gb|ACS39967.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Methylobacterium
extorquens AM1]
gi|254268650|emb|CAX24609.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Methylobacterium
extorquens DM4]
gi|373568375|gb|EHP94323.1| preprotein translocase, SecY subunit [Methylobacterium extorquens
DSM 13060]
Length = 447
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 253/438 (57%), Gaps = 25/438 (5%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++FG K L + LG L + RLG YIP+ G++ E F N +
Sbjct: 4 AAEQLAANLNFGAIAKADELKKRIWFTLGALIVFRLGTYIPIPGIDPEQFARNFQNQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ + +L I+P+I+A I+ QLL + P L+ L K+EGE+GRK + Q
Sbjct: 64 VLGMFNMFSGGAVERMAVFALNIMPYISASIIVQLLTSVVPTLEAL-KKEGESGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+VQ+ G L+ N T ++L++V LT G+ F +IGE+I+
Sbjct: 123 YTRYLTVVLALVQSWGIAFGLQGS-NAVITPGPFFILSTVVTLTGGTLFLMWIGEQITSR 181
Query: 242 KLGNGTSLLIFTSIISYLPAS-FGR---TVAEAFQDGNYIGLATIIISFILLVLGIVYVQ 297
+GNG+SL+IF I+++LPAS FG T A +G ++ + L+ IV+++
Sbjct: 182 GIGNGSSLIIFAGIVAHLPASIFGALELTRTGALSPAVLLGAG---LAAVALIYFIVFME 238
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----- 352
A+R++ INY R +S++LP K+N+SGV+P IF++S L LP T+A F
Sbjct: 239 RAQRRLLINYPKRQVGNRMYEGQSSFLPLKLNTSGVIPPIFASSLLLLPTTVASFSANQG 298
Query: 353 -TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
TGI L L G Y+ LI FF ++YT + +P + ++ LK+QG IP +
Sbjct: 299 STGI--LGTLTAYLGHGRPLYMVAYAGLIIFFTFFYTAIVFNPQETADNLKKQGGFIPGI 356
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG+ TAAF+ VL+RI+V+G+ +L + P ++ T +A GF GTS+LI+V
Sbjct: 357 RPGERTAAFIDKVLTRITVIGAAYLTFVCLVPEIVASYT--SAALGFGGTSLLIVVSVTM 414
Query: 472 DTARKVQAEIISQKYKNI 489
DT ++ +++ +Y+ +
Sbjct: 415 DTVAQIHGHLMAHQYEGL 432
>gi|407976922|ref|ZP_11157817.1| preprotein translocase subunit SecY [Nitratireductor indicus C115]
gi|407427649|gb|EKF40338.1| preprotein translocase subunit SecY [Nitratireductor indicus C115]
Length = 446
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 247/433 (57%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIP+ G+N +AF Q S
Sbjct: 4 AAEQLASNLNFAAFAKAEDLKKRIWFTLGALLVYRLGTYIPMPGINPDAFAQAFQQQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGMFNMFAGGAVGRMAIFALGIMPYISASIIMQLMTSVVPSLEQL-KKEGEQGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWV--LTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQA G + L N + W +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVILATVQAYGIAVGLEGGANIVADPGWFFRISAVITLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+IF+ I++ LP++ G T+ GL II ++ V+G IV+ + A+
Sbjct: 183 GIGNGISLIIFSGIVAGLPSAIGGTLELGRTGALSTGLILAIIVLVIAVIGAIVFFERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F+ L
Sbjct: 243 RRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGFSDTTQLPG 302
Query: 361 AAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
A A L G ++ LI FF ++YT + +P D ++QLK+ IP RPG+
Sbjct: 303 WASAVLASLGHGQPLFMALYASLIIFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G+++L ++ P + T + + G GTS+LI+V DT +
Sbjct: 363 TAEYIDYVLTRITVIGAIYLVLICLLPEFLISATGVPFYLG--GTSLLIVVSVTLDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+Q +I+ +Y+ +
Sbjct: 421 IQGHLIAHQYEGL 433
>gi|294651614|ref|ZP_06728918.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
gi|292822463|gb|EFF81362.1| preprotein translocase subunit SecY [Acinetobacter haemolyticus
ATCC 19194]
Length = 452
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 245/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDSVALASFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKLNQYTRYGTLFLALVQGIGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFVKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|158424158|ref|YP_001525450.1| preprotein translocase subunit SecY [Azorhizobium caulinodans ORS
571]
gi|158331047|dbj|BAF88532.1| preprotein translocase secY subunit [Azorhizobium caulinodans ORS
571]
Length = 444
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 250/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIPL G+N +A V Q
Sbjct: 4 AAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGAQQG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + FSGG + R+ I +L I+P+I+A I+ QLL ++P L+ L K+EGEAGRKK+ Q
Sbjct: 64 IIGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTTVSPTLEAL-KKEGEAGRKKINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+ QA G + L V D + +++V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRISTVITLTGGTMFMMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLGIVYVQEAE 300
+GNGTSL+IF I++ LP +F RT+ Q + +++ + L+ IV+++ A+
Sbjct: 183 GIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L +P T+A F G
Sbjct: 243 RRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L + L G Y+ +LLI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 LNQVTALLGHGRPLYMLLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VL+RI+V+G+ ++A + P V+ + + F GTS+LI+V DT ++
Sbjct: 363 AEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFY--FGGTSLLIVVSVTMDTVSQI 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGHLLAHQYEGL 432
>gi|90020626|ref|YP_526453.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
gi|89950226|gb|ABD80241.1| protein translocase subunit secY/sec61 alpha [Saccharophagus
degradans 2-40]
Length = 447
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 255/431 (59%), Gaps = 18/431 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + LL + + RLG +IP+ G++ E A + N +Q + L L+ FSGG R+
Sbjct: 16 GELWARLKFLLLAIFIYRLGTHIPVPGIDPEQIAQMFNRNQGTFLGMLNMFSGGAWERMS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ Q++A + P L+ L K+EGE+GR+K+ QYTRY +V A++QA
Sbjct: 76 ILALGIMPYISASIIMQMMAAVTPSLEAL-KKEGESGRRKISQYTRYLTVALALIQAFVM 134
Query: 202 VLYL----RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
V L Y + + +VT L G+ F ++GE++++ +GNG S+LIF I++
Sbjct: 135 VAGLAGQGMAYAGLAPLSFYVIAVTSLVTGAVFMMWLGEQVTERGIGNGISMLIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G+ A Q D + I L I ++ + +V +V ++ +R+I I YA R + R
Sbjct: 195 GLPGAVGQAFESARQGDLHPIALLAIGLAAVAIVWFVVRMERGQRRITIQYARRQSGRQA 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGG 369
++++LP K+N +GV+P+IF++S L P ++A++ G A+ L++ A+AL PG
Sbjct: 255 YSAQTSHLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKTAVILQEIALALGPGQ 314
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
LI F + YT + +P +V++ LKR GA IP +RPG +A ++ VL+R++
Sbjct: 315 WLNFVVFGALIILFCFVYTAMMYNPKEVADNLKRGGAYIPGIRPGDQSAKYIDGVLTRLT 374
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
V+GS+++A +A P + + + G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 375 VVGSLYIAAVALLPQFLMVAADVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSV 432
Query: 490 -EFYDIDSYGS 499
+ ++ SYG
Sbjct: 433 MKKANLQSYGK 443
>gi|262370558|ref|ZP_06063883.1| secretion protein [Acinetobacter johnsonii SH046]
gi|381197889|ref|ZP_09905228.1| preprotein translocase subunit SecY [Acinetobacter lwoffii WJ10621]
gi|262314358|gb|EEY95400.1| secretion protein [Acinetobacter johnsonii SH046]
Length = 452
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 249/415 (60%), Gaps = 19/415 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IP+ G+N A + N +Q ++L + FSGG + R+ I +LG
Sbjct: 29 RMMFLIGALLVFRLGAHIPVPGINNAALENLFNANQGTILGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV--LY 204
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQAIG L
Sbjct: 89 IMPYISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLFLALVQAIGMCAGLI 147
Query: 205 LRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTAGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLPNLIL 207
Query: 265 RTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
++++ +G + IGL + + ++ IV++++A+R+IP+NYA + R + +
Sbjct: 208 QSISSV-DNGQTSLIGLVIFGVLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTAQQS 266
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYL 373
+LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 267 HLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGIIKRSLQDLALVLSPGQPLYL 326
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+
Sbjct: 327 VLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGA 386
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ I+ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 387 IYITIICLMPMILQSSFGIPFSLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|198282657|ref|YP_002218978.1| preprotein translocase subunit SecY [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667727|ref|YP_002424850.1| preprotein translocase subunit SecY [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247178|gb|ACH82771.1| preprotein translocase, SecY subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519940|gb|ACK80526.1| preprotein translocase, SecY subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 443
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 249/421 (59%), Gaps = 23/421 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L LLG L + R+G +IP+ G++ A +Q ++L + FSGG + RL +
Sbjct: 20 LRNRILFLLGALLVFRVGAHIPVPGIDPAAMATFFNQQRGTILGMFNMFSGGALSRLTVF 79
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+FQL + PKL++L K+EGEAGR+K+ +YTRYA+V A++Q +G +
Sbjct: 80 ALGIMPYISASIIFQLAGSVFPKLEEL-KKEGEAGRRKITEYTRYATVILALMQGLGIAI 138
Query: 204 YLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
+ P V ++ T+ L G+ F +IGE+I++ +GNG S++IF I+
Sbjct: 139 AIEKMHAGTVPVVISPGPLFLFTTTISLACGTVFLMWIGEQITERGIGNGISMIIFAGIV 198
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI----VYVQEAERKIPINYASRYT 312
+ LP + G T E + G + L +++ +L L + V+++ A+R+IPI YA R
Sbjct: 199 AGLPDAIGTTF-ELMKTGQFQPL--FVVALFVLALAVTGFVVFMESAQRRIPIQYAKRQV 255
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPG 368
R +S ++P KVN SGV+P IF++S + LP TL A G+ L + AL+PG
Sbjct: 256 GRKVYGGQSTHMPLKVNMSGVIPPIFASSIILLPATLSGWFANVPGMEWLARFGQALSPG 315
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
+ Y+ I FF ++YT + +P + ++ LK+ GA +P +RPG+ TA ++ +L+R+
Sbjct: 316 SALYVVVFTTAIVFFAFFYTAMVFNPRETADNLKKSGAFVPGIRPGEHTAKYMDRILTRL 375
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ G+++L ++ P + ++ + F GTS+LI+V D ++Q+ +++ +Y+
Sbjct: 376 TLWGAIYLTLVCLLPEFLIVQYNVPFY--FGGTSLLIVVVVMMDLMGQIQSHLLTHQYEG 433
Query: 489 I 489
+
Sbjct: 434 L 434
>gi|70725823|ref|YP_252737.1| preprotein translocase subunit SecY [Staphylococcus haemolyticus
JCSC1435]
gi|68446547|dbj|BAE04131.1| preprotein translocase SecY subunit [Staphylococcus haemolyticus
JCSC1435]
Length = 430
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
FFK + K L L + ++G YIP GVN E F + + L++F GG +
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEPFEQQGSDQGVAALLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK + K +GE G++K+ TRY ++ A +Q
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGEVGKRKLSNVTRYFAIILAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y ++ ++L +V +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLGGKLIIHQSIMSYLLIAV-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LP+S + V +AF + ++ + +I+ +LL +G +YV EA+RKIPI
Sbjct: 185 FAGILSTLPSSIIQFVQQAFVGNDDTTLAWLKVIGLIVGLVLLTIGAIYVLEAKRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA-AVAL 365
YA + +++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A + +
Sbjct: 245 YAKKQSAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKADWAQTISEYA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP ++ + ++LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSNTYGMIVYVVLIIAFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVIAILPILATKFMSLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|407685271|ref|YP_006800445.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407701510|ref|YP_006826297.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
gi|407246882|gb|AFT76068.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'English Channel 673']
gi|407250657|gb|AFT79842.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Black Sea 11']
Length = 439
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 245/415 (59%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LKARLLFVLGAIVVFRLGSYVPIPGIDPAVLADLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL+ ++P + +L K+EGEAGR+K+ QYTRY ++ AI Q+IG
Sbjct: 77 ALGIMPYITASIIMQLLSVVHPPMVEL-KKEGEAGRRKISQYTRYLTLVLAIFQSIGIST 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L +N + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L I + I L +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGDINLLFLLLIGVIVIALTYLVVFVERGQRRIVVNYAKRQQGRQVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G A L+ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNESTAWLQDVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 LYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVPFY--FGGTSLLIIVVVIMDFMAQVQTHLMSSQYESV 428
>gi|108757580|ref|YP_631518.1| preprotein translocase subunit SecY [Myxococcus xanthus DK 1622]
gi|108461460|gb|ABF86645.1| preprotein translocase, SecY subunit [Myxococcus xanthus DK 1622]
Length = 448
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 246/431 (57%), Gaps = 27/431 (6%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F + F+ L + L LA+ R+GI+I GV+R A +D L+S + F
Sbjct: 6 FANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLF 65
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I LGI+P+++A I+ QLLA + P L+ LQK EG GR+K+ QYTRY ++
Sbjct: 66 SGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQK-EGAGGRQKINQYTRYGTIA 124
Query: 193 FAIVQAIGQVLYL--------------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
++VQ IG +L + V D S + +V LT G+AF ++GERI
Sbjct: 125 LSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWLGERI 184
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQ 297
++ +GNG SL+IF I++ L + + QD + ++ F+L+++ +VYV+
Sbjct: 185 TERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAVVYVE 244
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
R+IPI YA R R ++ Y P KVN+SGV+P IF+ + L+ P TL T
Sbjct: 245 RGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLG--TWFPF 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L+ A+ Y ++++ FF Y+YT L PDDV++ +K+QG IP +RPG+ T
Sbjct: 303 LQGFQRAIEGNLWIYNGLFVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARK 476
A F++ VL+R++ G+++L+I+ P+VI + L R F GT++LI+VG A DT ++
Sbjct: 363 AEFIERVLNRLTFGGAIYLSIVCVIPSVI---SGLLGVRFTFGGTALLIVVGVALDTVQQ 419
Query: 477 VQAEIISQKYK 487
++ +IS+ Y+
Sbjct: 420 IEGHLISRNYE 430
>gi|388547660|ref|ZP_10150922.1| preprotein translocase subunit SecY [Pseudomonas sp. M47T1]
gi|388274260|gb|EIK93860.1| preprotein translocase subunit SecY [Pseudomonas sp. M47T1]
Length = 443
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQA G + L
Sbjct: 82 MPYISASIIMQLMTVVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQATGMSIGLAN 140
Query: 208 YVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS + +V+ G+ F ++GE+I++ +GNG S+LIF+ I++ LP + G+
Sbjct: 141 QGVSFSAGISFYFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFSGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G +A L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGAWFGQSAGMGWLQDLSQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|389780927|ref|ZP_10194403.1| preprotein translocase subunit SecY [Rhodanobacter spathiphylli
B39]
gi|388435588|gb|EIL92486.1| preprotein translocase subunit SecY [Rhodanobacter spathiphylli
B39]
Length = 440
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 245/417 (58%), Gaps = 30/417 (7%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
++G L + RLG +IP+ GVN EA + N L+ + FSGG + R + +LG++P+I+
Sbjct: 25 VIGALVVFRLGSFIPVPGVNPEAMTSLVSGNGLMDMFNMFSGGALARFSVFALGVIPYIS 84
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------ 206
A IVFQ++ + P LQ L+K EGE+G++K+ YTRYA+V A Q+ G + L+
Sbjct: 85 ASIVFQMMGAVVPSLQTLRK-EGESGKRKMTMYTRYATVALAAFQSFGIAVALQGQVAAG 143
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V +VL+SV LT G+ F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 144 GAPVVYTPGFGFVLSSVVGLTAGTMFLMWLGEQMTERGVGNGISLLIFAGIVAGLPGAVV 203
Query: 265 RTVAEAFQDGN--------YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
T+ A +G GLA + +F +V+++ A+R+I +NYA R +
Sbjct: 204 HTLGMA-SNGELSLIKLLMVFGLALAVTAF------VVFMERAQRRITVNYARRSGGQKA 256
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAA--LKKAAVALNPGGSFY 372
+ +S+ LP K+N +GV+P IF++S L P T + TG + ++ AL+PG Y
Sbjct: 257 YMNQSSNLPLKINMAGVIPPIFASSLLMFPATAVSWFSTGQQSRWVQDLVQALSPGNPLY 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+L+ F ++YT + + D+ ++ LKR GA IP +RPGK TA ++ V++R++ +G
Sbjct: 317 EIVFSVLVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPGKGTANYIDAVMTRLTGVG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++L ++ P+ ++ H+ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 377 ALYLVLVCLVPSFMQSAWHVPFY--FGGTSLLIVVVVVMDFTSQVQAHLVSHQYESL 431
>gi|422631215|ref|ZP_16696404.1| preprotein translocase subunit SecY [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330940910|gb|EGH43861.1| preprotein translocase subunit SecY [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 444
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 253/423 (59%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVVLALVQAIGMSVGLAS 140
Query: 208 YVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D + +VT G+ F ++G +I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSGDLGFHFVAVTTFVAGAMFMMWLGGQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|226953891|ref|ZP_03824355.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
gi|226835374|gb|EEH67757.1| preprotein translocase subunit SecY [Acinetobacter sp. ATCC 27244]
Length = 440
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 245/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 17 RLMFLIGALLVFRLGAHIPLPGIDSVALASFFKANEGTFLGLFNMFSGGALERMSILALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 77 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKLNQYTRYGTLFLALVQGIGMCAGLI 135
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 136 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 191
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 192 NLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 251
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 252 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFVKRSLQDLALVLSPGQP 311
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 312 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 371
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 372 IGAIYITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|221234263|ref|YP_002516699.1| preprotein translocase subunit SecY [Caulobacter crescentus NA1000]
gi|220963435|gb|ACL94791.1| protein translocase subunit secY [Caulobacter crescentus NA1000]
Length = 451
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 252/439 (57%), Gaps = 20/439 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++F F K L + + L + RLG Y+P+ GV+ AF QNS
Sbjct: 4 AAEQLAANMNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
LL D FSGG + R+ I SL ++P+I+A I+ QL+ + P + L+K GEAGRK + Q
Sbjct: 64 LLGMFDMFSGGAVERMAIFSLNVMPYISASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQ 123
Query: 185 YTRYASVGFAIVQ----AIGQVLYLRP-YVND--FSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A+VQ AIG + +P V D T ++++++ LT G+ F ++GE+
Sbjct: 124 YTRYLAVILAVVQSASIAIG--IAAQPGVVADGVGHTFFIVSTIVALTGGTMFLMWLGEQ 181
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQ 297
I+ +GNG SL+IF I++ LP + + +A + NY+ L ++ I +L IV+++
Sbjct: 182 ITSRGVGNGVSLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIE 241
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGT------LAR 351
++R++ ++Y R S+++P K+N++GV+P IF++S L LP T A
Sbjct: 242 RSQRRLLVHYPKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTAN 301
Query: 352 FTGIAALKKAAV-ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
G A+ A V AL G +L LLI FF+++YT + +PD+ +E L++ G +P
Sbjct: 302 LPGWASWLPAMVGALQHGQPAFLALYALLIIFFSFFYTSVVFNPDETAENLRKYGGFLPG 361
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+RPGK TA +L VL+R++V+G+ ++ + P + + T F GTS+LI+V
Sbjct: 362 IRPGKRTAEYLDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQF-ALGGTSILIVVTVT 420
Query: 471 TDTARKVQAEIISQKYKNI 489
DT ++Q+ +++ +Y+ +
Sbjct: 421 MDTVAQIQSHLLAHQYEGL 439
>gi|406040561|ref|ZP_11047916.1| preprotein translocase subunit SecY [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 452
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 254/442 (57%), Gaps = 27/442 (6%)
Query: 70 AMEDSSIDFGDFFKG-PLPGKF-------LKLLGYLALSRLGIYIPLGGVNREAFVGNLD 121
AM SS + KG P K+ + L+G L + RLG +IPL G++ A
Sbjct: 2 AMSPSSSGHVNMMKGQPFHVKYREIIRRLMFLVGALLVFRLGAHIPLPGIDNVALARFFK 61
Query: 122 QN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGR 179
N + L + FSGG + R+ I +LGI+P+I+A I+ QL++ + P L+ L K+EGE G+
Sbjct: 62 ANEGTFLGLFNMFSGGALERMSILALGIMPYISASIIVQLMSTVVPSLEAL-KKEGEQGK 120
Query: 180 KKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTSVTLLTLGSAFTTYIGER 237
+K+ QYTRY ++ A+VQ +G L ++ + + +VT L G+ F ++GE+
Sbjct: 121 RKINQYTRYGTLFLALVQGVGMCAGLISQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQ 180
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASF--GRTVAEAFQDGNYIGLATIIISFILLVLGIVY 295
I++ +GNG S++IF I++ LP G T + Q G+ IG+A + + ++ IV+
Sbjct: 181 ITERGIGNGISMIIFAGIVAGLPNQVIQGFTSVQNGQ-GSLIGMAVFALLSLAVLAAIVF 239
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI 355
+++A+R+IP+NYA + R + +LP K+N +GV+P IF++S L P +L ++ G
Sbjct: 240 IEKAQRRIPVNYAQKQQGRRVFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGS 299
Query: 356 A---------ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 406
A AL+ A+ L+PG YL LI FF Y+YT L P +VSE LKR GA
Sbjct: 300 ADPNAGIVKRALQDLALVLSPGQPLYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGA 359
Query: 407 SIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 466
+P +RPG+ TA +L +L+R++ +G++++ ++ P +++ + + G GTS+LI+
Sbjct: 360 YVPGIRPGEQTARYLDHILNRLTFIGAIYITVVCLMPMILQSSFGIPFHLG--GTSLLIV 417
Query: 467 VGCATDTARKVQAEIISQKYKN 488
V D ++QA + S +Y N
Sbjct: 418 VVVVMDFMAQLQAHLTSHQYDN 439
>gi|160872417|ref|ZP_02062549.1| preprotein translocase, SecY subunit [Rickettsiella grylli]
gi|159121216|gb|EDP46554.1| preprotein translocase, SecY subunit [Rickettsiella grylli]
Length = 452
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 255/415 (61%), Gaps = 16/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGV--NREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L +L L + R+G +IP+ G+ +R A + + NS+L + FSGG + R +
Sbjct: 25 LKARLLFVLLALIVYRIGAHIPVPGLDPHRLADLFSHQSNSILGLFNMFSGGALSRFTVF 84
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LG++P+I+ I+ QLL + P L++L K+EGE+GR+K+ QYTRY + A VQA+G
Sbjct: 85 ALGLLPYISVSIIVQLLTAVTPALEEL-KKEGESGRRKLNQYTRYGTALLAFVQAVGMAK 143
Query: 204 YL---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+L +N + + ++TL+T G+ F ++GE+I++ +GNG SL+IF+ I+S LP
Sbjct: 144 WLVGNHVVLNPGFFFYFVATITLVT-GTMFLMWLGEQITEHGIGNGISLIIFSGIVSGLP 202
Query: 261 ASFGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+ +++ E F+ G ++ L I+ +L+ +V+++ +R+I +NY R R
Sbjct: 203 VAMAKSL-EQFRQGQVQFLTLLCILAVILLVTAFVVFMERGQRRITVNYPQRQQGRKIYS 261
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLP 374
++++LP K+N +GV+P IF++S + LPGT A + G+ L K + L+PG Y+
Sbjct: 262 AQTSHLPLKINMAGVIPPIFASSIMLLPGTFANWFANLKGMGWLGKLSFWLSPGQPLYIL 321
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF+++YT L +P + ++ LK+ GA IP +RPG+ +A ++ T ++R++++GS+
Sbjct: 322 LFAAAIIFFSFFYTALVFNPRETADNLKKSGAFIPGIRPGEQSARYIDTTMTRLTLIGSL 381
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+L ++A P + T H+ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 382 YLVLVALLPEFMIFTWHVPFY--FGGTSLLIIVVVIMDFMTQVQSLLMSHQYESL 434
>gi|329122804|ref|ZP_08251376.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
gi|327472068|gb|EGF17506.1| preprotein translocase subunit SecY [Haemophilus aegyptius ATCC
11116]
Length = 441
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ +IS +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLISSQYES 429
>gi|16125517|ref|NP_420081.1| preprotein translocase subunit SecY [Caulobacter crescentus CB15]
gi|13422601|gb|AAK23249.1| preprotein translocase SecY subunit [Caulobacter crescentus CB15]
Length = 440
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 239/409 (58%), Gaps = 19/409 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + RLG Y+P+ GV+ AF QNS LL D FSGG + R+ I SL ++P+I+A
Sbjct: 23 LIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMFSGGAVERMAIFSLNVMPYISAS 82
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ----AIGQVLYLRPYV- 209
I+ QL+ + P + L+K GEAGRK + QYTRY +V A+VQ AIG + +P V
Sbjct: 83 IIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVILAVVQSASIAIG--IAAQPGVV 140
Query: 210 --NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
T ++++++ LT G+ F ++GE+I+ +GNG SL+IF I++ LP + +
Sbjct: 141 ADGVGHTFFIVSTIVALTGGTMFLMWLGEQITSRGVGNGVSLIIFAGIVASLPIKLMQML 200
Query: 268 AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFK 327
+A + NY+ L ++ I +L IV+++ ++R++ ++Y R S+++P K
Sbjct: 201 TQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHYPKRQQGNRMIGGESSFMPLK 260
Query: 328 VNSSGVMPIIFSTSSLALPGT------LARFTGIAALKKAAV-ALNPGGSFYLPTNILLI 380
+N++GV+P IF++S L LP T A G A+ A V AL G +L LLI
Sbjct: 261 INTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPAMVGALQHGQPAFLALYALLI 320
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF+++YT + +PD+ +E L++ G +P +RPGK TA +L VL+R++V+G+ ++ +
Sbjct: 321 IFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEYLDYVLTRLTVIGAAYITAVC 380
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P + + T F GTS+LI+V DT ++Q+ +++ +Y+ +
Sbjct: 381 IAPEFVMMAMNSTQF-ALGGTSILIVVTVTMDTVAQIQSHLLAHQYEGL 428
>gi|298291458|ref|YP_003693397.1| preprotein translocase subunit SecY [Starkeya novella DSM 506]
gi|296927969|gb|ADH88778.1| preprotein translocase, SecY subunit [Starkeya novella DSM 506]
Length = 443
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 252/432 (58%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIP+ G+N +A V Q
Sbjct: 4 AAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPMPGINPDALADVFRTAQQG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + FSGG + R+ I +L I+P+I+A I+ QLL ++P L+ L K+EGEAGRK++ Q
Sbjct: 64 IIGLFNMFSGGAVSRMAIFALNIMPYISASIIIQLLTTVSPTLEAL-KKEGEAGRKQINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+ Q+ G + L V+D + +++V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAVFQSYGIAVGLEGSGAVVSDPGWFFRISTVITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAE 300
+GNG SL+IF I++ LP++ T+ Q G+ +I+ + +++ IV+++ A+
Sbjct: 183 GIGNGISLIIFAGIVAELPSAIANTLELGRQGALSTGIILAVILMAVAVIMFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L +P T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKVYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTVASFMQGSGPGW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L + G ++ +LLI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 LTTVTTLIGHGQPLFMLLYVLLIVFFCFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VL+RI+V+G+ +LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLTRITVIGAAYLAIVCLFPEILISYAAVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGHLLAHQYEGL 432
>gi|352105683|ref|ZP_08960890.1| preprotein translocase subunit SecY [Halomonas sp. HAL1]
gi|448747882|ref|ZP_21729534.1| SecY protein [Halomonas titanicae BH1]
gi|350598260|gb|EHA14382.1| preprotein translocase subunit SecY [Halomonas sp. HAL1]
gi|445564530|gb|ELY20649.1| SecY protein [Halomonas titanicae BH1]
Length = 443
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 244/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ + +LGI+P+I+A I+ Q
Sbjct: 32 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSVLALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
L+ ++P L+ L K+EGEAGR+K+ QYTRY +V A VQA G + L Y DFS
Sbjct: 92 LMTAVSPHLEQL-KKEGEAGRRKISQYTRYGTVILAFVQATGMSVGLASQGIAYSADFS- 149
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T+V G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+ A +G
Sbjct: 150 -FYFTAVITFVSGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPSAVGQAFELARNEG 208
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + L + + I V +V+++ +R++ +NY R +S+YLP KVN +G
Sbjct: 209 AWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRRQVGNKMYAGQSSYLPLKVNMAG 268
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P ++ ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 269 VIPAIFASSILLFPASIGQWVGAGEGMEWLQRASQALGPGQPLYILLFAAAVVFFCFFYT 328
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 329 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYIDKVMTRLTLFGALYITAVSLMPQFLIV 388
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 389 AWNVPFF--FGGTSLLIVVVVIMDFMAQVQSHLMSHQYDSVMKKSNLKGYGS 438
>gi|92112574|ref|YP_572502.1| preprotein translocase subunit SecY [Chromohalobacter salexigens
DSM 3043]
gi|91795664|gb|ABE57803.1| protein translocase subunit secY/sec61 alpha [Chromohalobacter
salexigens DSM 3043]
Length = 443
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 246/410 (60%), Gaps = 14/410 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + +N ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 32 RIGAHIPVPGINPDQLAALFRENQGTILGMFNMFSGGALSRMSIFALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
LL ++P+L+ L K+EGEAGR+K+ QYTRY +V A++QA G + L +S D +
Sbjct: 92 LLTAVSPQLEQL-KKEGEAGRRKINQYTRYGTVVLALIQATGMAVGLVGQGVAYSGDLSF 150
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG-- 274
T++ G+ F ++GE+I++ +GNG SL+IF I++ LP++ G++ A DG
Sbjct: 151 YFTAIVTFVAGAVFLMWLGEQITEKGIGNGISLIIFAGIVAGLPSAIGQSFTLARNDGAW 210
Query: 275 NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
N + L + + I V +V+++ +R+I +NY R +S+YLP KVN +GV+
Sbjct: 211 NILPLLALAVLGIATVAFVVFIERGQRRITVNYPRRQVGNKMYAGQSSYLPLKVNMAGVI 270
Query: 335 PIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
P IF++S L P ++ ++ G +A L+ + A+ PG Y+ + FF ++YT L
Sbjct: 271 PPIFASSILLFPASIGQWVGEGQNMAWLQTVSQAMGPGQPLYILLFAAAVLFFCFFYTAL 330
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
+P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 331 VFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLFGALYITAVSLMPQFLVVAW 390
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
+ + F GTS+LI+V D +VQ+ ++S +Y+++ + ++ YGS
Sbjct: 391 QVPFY--FGGTSLLIVVVVVMDFMAQVQSHLMSNQYESVMKKSNLKGYGS 438
>gi|304315960|ref|YP_003851105.1| preprotein translocase subunit SecY [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654119|ref|YP_007297827.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777462|gb|ADL68021.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292308|gb|AGB18130.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 418
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 230/395 (58%), Gaps = 9/395 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G++ L Q +L D SGG I ++ IVP+INA I+
Sbjct: 25 LLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDIISGGAFRDFTIFAMSIVPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + LR V + +
Sbjct: 85 MQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYMTVVLALIQAIGMTIGLRGAVINPNFLN 143
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ V LT G++F ++GERI++ +GNG+SL+IF I++ +P T+ N
Sbjct: 144 LTIIVLTLTAGTSFLMWLGERITENGVGNGSSLIIFAGILARIPNMIYTTIQYVGAGTAN 203
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
G +I +++V+ I+ + E +R+IP+ YA R R +S ++P ++N +GV+P
Sbjct: 204 IFGAIAFLIVILVMVVSIILMSEGQRRIPVQYAKRVVGRKVYGGQSTHIPLRINMAGVIP 263
Query: 336 IIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+IF+ S L P +A F + A + + N G Y N+LLI FF Y+YT +
Sbjct: 264 LIFALSLLQFPQQIATFFPKSAFYAFTEKWLGTN--GWIYNVLNVLLIIFFTYFYTAIIF 321
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P ++S+ +K+ G IP +RPGK T F+ V++R++ +GS+FLA++A P ++ T L
Sbjct: 322 NPVEISDNMKKYGGFIPGIRPGKPTTDFITRVMNRVTFVGSIFLAVVAVLPVIMMNVTGL 381
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI VG A +T ++++ ++I + Y+
Sbjct: 382 QLY--FGGTALLIAVGVALETMKQIEGQLIMRNYQ 414
>gi|262373501|ref|ZP_06066779.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
gi|262311254|gb|EEY92340.1| preprotein translocase, SecY subunit [Acinetobacter junii SH205]
Length = 452
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 245/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDNVALARFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ +G L
Sbjct: 89 IMPYISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRYGTLFLALVQGVGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQSFTTVQNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIIKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|188581396|ref|YP_001924841.1| preprotein translocase subunit SecY [Methylobacterium populi BJ001]
gi|179344894|gb|ACB80306.1| preprotein translocase, SecY subunit [Methylobacterium populi
BJ001]
Length = 447
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 252/437 (57%), Gaps = 23/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++FG K L + LG L + RLG YIP+ G++ E F N +
Sbjct: 4 AAEQLAANLNFGAIAKADELKKRIWFTLGALIVFRLGTYIPIPGIDPEQFARNFQNQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ + +L I+P+I+A I+ QLL + P L+ L K+EGE+GRK + Q
Sbjct: 64 VLGMFNMFSGGAVERMAVFALNIMPYISASIIVQLLTSVVPSLEAL-KKEGESGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR--PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
YTRY +V A+VQ+ G L+ V + ++L++V LT G+ F +IGE+I+
Sbjct: 123 YTRYLTVVLALVQSWGIAFGLQGSNAVINPGPFFILSTVVTLTGGTLFLMWIGEQITSRG 182
Query: 243 LGNGTSLLIFTSIISYLPAS-FGR---TVAEAFQDGNYIGLATIIISFILLVLGIVYVQE 298
+GNG+SL+IF I+++LPAS FG T A +G A ++ I IV+++
Sbjct: 183 IGNGSSLIIFAGIVAHLPASIFGALELTRTGALSPAILLGAAVAAVALIYF---IVFMER 239
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF------ 352
A+R++ INY R +S++LP K+N+SGV+P IF++S L LP T+A F
Sbjct: 240 AQRRLLINYPKRQVGNRMYEGQSSFLPLKLNTSGVIPPIFASSLLLLPTTVASFSANQGS 299
Query: 353 TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
TGI L L G Y+ LI FF ++YT + +P + ++ LK+QG IP +R
Sbjct: 300 TGI--LGTLTAYLGHGRPLYMVAYAGLIIFFTFFYTAIVFNPQETADNLKKQGGFIPGIR 357
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TAAF+ VL+RI+V+G+ +L + P ++ T +A GF GTS+LI+V D
Sbjct: 358 PGERTAAFIDKVLTRITVIGAAYLTFVCLVPEIVASYT--SAALGFGGTSLLIVVSVTMD 415
Query: 473 TARKVQAEIISQKYKNI 489
T ++ +++ +Y+ +
Sbjct: 416 TVAQIHGHLMAHQYEGL 432
>gi|408374100|ref|ZP_11171790.1| preprotein translocase subunit SecY [Alcanivorax hongdengensis
A-11-3]
gi|407765985|gb|EKF74432.1| preprotein translocase subunit SecY [Alcanivorax hongdengensis
A-11-3]
Length = 460
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 252/429 (58%), Gaps = 28/429 (6%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
LLG + + R+G +IP+ G+N EA + N +++++L + FSGG + R+ I +LGI+P+
Sbjct: 31 LLGAMVVFRIGAHIPVPGMNPEALQQMFNNNRDTILGLFNMFSGGSLQRMSIFALGIMPY 90
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-------QVL 203
I A IV QL+ + P L+ L+K EGE GR+K+ QYTRY +V +Q+ G Q +
Sbjct: 91 ITASIVIQLMTAVVPSLEQLRK-EGEQGRRKITQYTRYLTVILGAIQSFGVCAGLKSQGI 149
Query: 204 YLRPYVNDFSTDWV----LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L P D +T V +V+ L G+ F ++GE+I++ +GNG S+LIFTSI++ L
Sbjct: 150 TLLP--EDANTMQVASFYFVAVSTLVTGTVFLMWLGEQITERGIGNGISMLIFTSIVAGL 207
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + T A D + I L + + ++++ G+V+V+ +R+I +NYA R R
Sbjct: 208 PGAVANTFESAHTGDLSLIMLLGVFLVAMVVIFGVVFVERGQRRITVNYARRQQGRRVYA 267
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA--------ALKKAAVALNPGGS 370
+ ++LP KVN +GV+P IF++S L P +L + + AL+ + AL PG
Sbjct: 268 AQQSHLPLKVNMAGVIPAIFASSILLFPASLTHWFSDSNPDSWWGQALRSISDALLPGTP 327
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ L I FF Y+YT L +P DV++ LK+ GA IP +RPG+ +A ++ TV+ R+++
Sbjct: 328 LYILLFTLAIVFFCYFYTALVFNPKDVADNLKKSGAYIPGIRPGEQSARYIDTVMGRLTL 387
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY-KNI 489
+G++++ ++ P ++ ++ + G GTS+LI+V D +V A + S +Y K +
Sbjct: 388 IGAMYMTLVCLLPLGLQSVANVPFYLG--GTSLLIVVVVVMDFWSQVNAHLTSTQYEKLM 445
Query: 490 EFYDIDSYG 498
+ ++ YG
Sbjct: 446 KKANLKGYG 454
>gi|359428612|ref|ZP_09219642.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
gi|358235798|dbj|GAB01181.1| preprotein translocase secY subunit [Acinetobacter sp. NBRC 100985]
Length = 452
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 245/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDNVALARFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ +G L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGVGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYIPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQSFTSVQNGQGSLIGLAVFGLLSLAVLTAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVVCLMPMILQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|254464217|ref|ZP_05077628.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
Y4I]
gi|206685125|gb|EDZ45607.1| preprotein translocase, SecY subunit [Rhodobacterales bacterium
Y4I]
Length = 454
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 243/420 (57%), Gaps = 25/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L +G L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTIGLLIVYRLGTFIPVPGIDAAALRQFMEQAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTRY +V A QA G +
Sbjct: 83 ALGIMPYISASIIVQLLTSMVPSLEQL-KKEGEQGRKKINQYTRYGTVLLATAQAYGLAV 141
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D +TD + + + L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLEQ--GDLATDPGMYFRMACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAEV 199
Query: 260 PASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGI----VYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ +II IL+V+ + V+++ A RKI I Y R
Sbjct: 200 PAA----IAQFFASGRSGAISPAVIIGVILMVVAVIMFVVFMERALRKIHIQYPRRQVGM 255
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL----NPGGS 370
S++LP KVN +GV+P IF++S L LP T++ F+ AA L PG
Sbjct: 256 KVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPTTISAFSSGAATGPVMSWLLANFGPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + +I FF Y+YTF + PDDV+ LK Q +P +RPGK TA +++ V++RI
Sbjct: 316 LYLLFFVAMIVFFAYFYTFNVSFKPDDVANNLKNQNGFVPGIRPGKKTAEYIEYVVNRIL 375
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
VLGS +LA++ P V+ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 376 VLGSAYLALVCLLPEVLRGQFAIPVY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 433
>gi|402756103|ref|ZP_10858359.1| preprotein translocase subunit SecY [Acinetobacter sp. NCTC 7422]
Length = 452
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDNVALAHFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLFLALVQGIGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGL + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|338999009|ref|ZP_08637664.1| preprotein translocase subunit SecY [Halomonas sp. TD01]
gi|338764030|gb|EGP19007.1| preprotein translocase subunit SecY [Halomonas sp. TD01]
Length = 443
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 244/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ + +LGI+P+I+A I+ Q
Sbjct: 32 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSVLALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
L+ ++P L+ L K+EGEAGR+K+ QYTRY +V A VQA G + L Y DFS
Sbjct: 92 LMTAVSPHLEQL-KKEGEAGRRKISQYTRYGTVLLAFVQATGMSVGLASQGIAYSADFS- 149
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T+V G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+ A +G
Sbjct: 150 -FFFTAVITFVSGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPSAVGQAFELARNEG 208
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + L + + I V +V+++ +R++ +NY R +S+YLP KVN +G
Sbjct: 209 AWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRRQVGNKMYAGQSSYLPLKVNMAG 268
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P ++ ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 269 VIPAIFASSILLFPASIGQWVGAGEGMEWLQRASQALGPGQPLYILLFAAAVVFFCFFYT 328
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 329 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYIDKVMTRLTLFGALYITAVSLMPQFLIV 388
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 389 AWNVPFF--FGGTSLLIVVVVIMDFMAQVQSHLMSHQYDSVMKKSNLKGYGS 438
>gi|409427724|ref|ZP_11262217.1| preprotein translocase subunit SecY [Pseudomonas sp. HYS]
Length = 443
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 253/423 (59%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLAG 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSADFGFHFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ + ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|358450674|ref|ZP_09161128.1| preprotein translocase subunit SecY [Marinobacter manganoxydans
MnI7-9]
gi|385330141|ref|YP_005884092.1| SecY protein [Marinobacter adhaerens HP15]
gi|311693291|gb|ADP96164.1| SecY protein [Marinobacter adhaerens HP15]
gi|357225151|gb|EHJ03662.1| preprotein translocase subunit SecY [Marinobacter manganoxydans
MnI7-9]
Length = 440
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 250/410 (60%), Gaps = 18/410 (4%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL LL Y R+G +IP+ G+N + +QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLALLVY----RIGAHIPVPGINPDRLAALFEQNQGTILSMFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQ G + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQGFGISVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
F+ + V +++ G+ F ++GE+I++ +GNG SLLIF I++ LP + G+
Sbjct: 141 QGVTFNDSFSFHFVAVVSFVSGAVFMMWLGEQITERGVGNGISLLIFAGIVAGLPGAIGQ 200
Query: 266 TVAEAFQDGNYIGLATIIISFILL-VLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
T+ +A ++G L + I + + V+G +V+++ +R++ INYA R R Q+S++
Sbjct: 201 TLEQA-RNGEMSLLVVLGIGVLAVAVIGFVVFMERGQRRLTINYAKRQQGRRVFAQQSSH 259
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL 379
LP KVN +GV+P IF++S L P +L ++ G+ L + AL P Y+
Sbjct: 260 LPLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDVSQALAPSQPLYIILFAAA 319
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ FF ++YT L +P +V++ LKR GA IP +RPG TA ++ VL+R+++ G++++A +
Sbjct: 320 VVFFCFFYTALMYNPKEVADNLKRSGAFIPGIRPGDQTAKYIDGVLTRLTLFGAMYIAAV 379
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 380 SLFPQFLMVAGNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYESL 427
>gi|322436526|ref|YP_004218738.1| preprotein translocase subunit SecY [Granulicella tundricola
MP5ACTX9]
gi|321164253|gb|ADW69958.1| preprotein translocase, SecY subunit [Granulicella tundricola
MP5ACTX9]
Length = 470
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 240/439 (54%), Gaps = 42/439 (9%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L LG LA+ RLG +IP G++ + + NS L +D FSGG + RL I +LG
Sbjct: 17 RVLFTLGLLAIYRLGAHIPTPGIDAKQLAQFFNNNSGSALGLVDLFSGGNLRRLTIFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I A I+FQLL I L LQK EGE GR+K+ Q+TRY +V IVQ+ L L
Sbjct: 77 IMPYITASIIFQLLTVIYEPLAKLQK-EGEMGRRKITQWTRYVTVMLGIVQSTAIALTLT 135
Query: 207 PYVNDFS----TDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
S + W + +LTL G+AF ++GE+I++ +GNG SLLIFT I+ LP
Sbjct: 136 NTQTGQSMVTISKWAFIPMCVLTLTAGTAFIMWLGEQITERGIGNGMSLLIFTGIVVGLP 195
Query: 261 AS----FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+ + A+ I L ++ + +V I+YV+ +ER+IP+ YA R R
Sbjct: 196 RGIEELYTKATTNAWGAFTPIALLILVALMVAVVAFIIYVERSERRIPVQYAKRIVGRRM 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLA--RFTGIAALKKAAV------ALNPG 368
+ +LP KVNS GVMP+IF++S L+ P A F G A L+ A+ PG
Sbjct: 256 TQGGATHLPLKVNSGGVMPVIFASSILSAPLLFAGMSFFGSAKLQDTTFFGPILRAIAPG 315
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
Y I+ I FF Y+Y + PDD+++ +++ G IP +RPG+ T+ F+ VL+RI
Sbjct: 316 EPLYELLYIVAIIFFAYFYISIVFRPDDIADNMRKYGGFIPGIRPGRRTSDFINDVLTRI 375
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLT-------AFRG--------------FAGTSVLILV 467
+++G+V+L I++ P ++ H AF F GTS+LI+V
Sbjct: 376 TLVGAVYLIIISIIPTLLISGIHFNHIPLIGAAFEHLPVWVTHGLGVNFYFGGTSLLIVV 435
Query: 468 GCATDTARKVQAEIISQKY 486
G A DT +++++++I + Y
Sbjct: 436 GVAMDTVQQIESQLIMRHY 454
>gi|152998251|ref|YP_001343086.1| preprotein translocase subunit SecY [Marinomonas sp. MWYL1]
gi|150839175|gb|ABR73151.1| preprotein translocase, SecY subunit [Marinomonas sp. MWYL1]
Length = 443
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 251/409 (61%), Gaps = 16/409 (3%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + DQN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLSALFDQNEGTILSLFNVFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QLL ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQ+ + L
Sbjct: 82 LPYISASIIMQLLTVVSPQLEQL-KKEGEAGRRKITQYTRYGTVLLALVQSASMAVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS+ +V ++TL G+ F ++GE++++ +GNG S+LIF I++ LP++ GR
Sbjct: 141 QGISFSSGMEFYAVAVVTLVAGTVFLMWLGEQVTEKGIGNGISILIFAGIVAGLPSALGR 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N + L I I I + +V+++ +R+I +NYA R + + ++L
Sbjct: 201 SFESARQGDINILALLLIGILAIATIAFVVFIERGQRRITVNYAKRQQGKKVFAAQKSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLI 380
P KVN +GV+P IF++S L P ++ ++ G+ L+ ++AL PG Y+ + I
Sbjct: 261 PLKVNMAGVIPPIFASSILLFPASIGQWFGQGEGMEWLQNISLALAPGQPLYVLLFAIAI 320
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF ++YT L +P DV++ LK+ GA +P +RPG TA ++ V++R+++ G++++ +++
Sbjct: 321 VFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGDHTARYIDGVMTRLTLFGALYITLVS 380
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + F GTS+LI+V D +VQ+ ++SQ+Y+++
Sbjct: 381 LMPQFFVVAWNVPFY--FGGTSMLIVVVVVMDFMSQVQSHLMSQQYESL 427
>gi|416079367|ref|ZP_11586181.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444338533|ref|ZP_21152360.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348003005|gb|EGY43662.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544923|gb|ELT54811.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 441
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 253/417 (60%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG +GR I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALGRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS-- 315
PA+ G+T+ +A + G L ++I+ I+L + +V+V+ +R+I + YA R R
Sbjct: 198 PAAVGQTIEQA-RLGQMHFLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGRQIL 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
GG S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG
Sbjct: 257 GG--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPL 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++
Sbjct: 315 YLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G +++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 375 GGIYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|213158815|ref|YP_002320813.1| preprotein translocase subunit SecY [Acinetobacter baumannii
AB0057]
gi|301345030|ref|ZP_07225771.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB056]
gi|301595204|ref|ZP_07240212.1| preprotein translocase subunit SecY [Acinetobacter baumannii AB059]
gi|421800038|ref|ZP_16236017.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC1]
gi|213057975|gb|ACJ42877.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
AB0057]
gi|410408246|gb|EKP60214.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC1]
Length = 452
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 33 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 92
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 93 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 151
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 152 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 211
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+ +IP+NYA + R + +L
Sbjct: 212 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQCRIPVNYAQKQQGRRIFTAQQTHL 268
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 269 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 328
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 329 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 388
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 389 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|417571922|ref|ZP_12222776.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC-5]
gi|400207490|gb|EJO38460.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
Canada BC-5]
Length = 440
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 247/413 (59%), Gaps = 23/413 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L+G L + RLG +IP+ G+N A + + +Q ++L + FSGG + R+ I +LGI+P+
Sbjct: 21 LIGALLVFRLGAHIPVPGINNAALENLFHANQGTILGLFNMFSGGALERMSILALGIMPY 80
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA+G L
Sbjct: 81 ISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLAVVQAVGMCAGLIGQGI 139
Query: 211 DFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
S+ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP ++V+
Sbjct: 140 TLSSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPKLIMQSVS 199
Query: 269 EAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
D L ++I F LL LG IV++++A+ +IP+NYA + R + +L
Sbjct: 200 SV--DNGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQCRIPVNYAQKQQGRRIFTAQQTHL 256
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLPT 375
P K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 257 PLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGLIKRSLQDLALVLSPGQPLYLVL 316
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G+++
Sbjct: 317 FGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAIY 376
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ ++ P +++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 377 ITVICLMPMILQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|159042861|ref|YP_001531655.1| preprotein translocase subunit SecY [Dinoroseobacter shibae DFL 12]
gi|157910621|gb|ABV92054.1| preprotein translocase, SecY subunit [Dinoroseobacter shibae DFL
12]
Length = 453
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 241/411 (58%), Gaps = 24/411 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIP+ G++ +DQ + L L+ F+GG I R+GI +LGI+P+I
Sbjct: 31 LGLLIVYRLGTYIPVPGIDGAQLREFMDQAAAGLGGVLNMFTGGAISRMGIFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QLL + PKL+ L K+EGE GRKK+ QYTRY +V A QA G + L
Sbjct: 91 SASIIVQLLTAMVPKLEQL-KKEGEQGRKKINQYTRYGTVFLATFQAYGLAISLES--GG 147
Query: 212 FSTD--WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD W + ++TL G+ F ++GE+I+ +GNG SL+IF II+ LPA+ +
Sbjct: 148 LVTDPGWFFRAACVITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAELPAA----L 203
Query: 268 AEAFQDGNYIGLAT-IIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
A+ F+ G L+T +I+ IL++L +V+++ A RKI I Y R S+
Sbjct: 204 AQFFESGRSGALSTPVILGVILMLLATLVFVVFMERALRKIHIQYPRRQVGMKMYDGGSS 263
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSFYLPTNILL 379
+LP K+N +GV+P IF++S L LP T++ F+G + + PG YL +
Sbjct: 264 HLPVKINPAGVIPAIFASSLLLLPTTISTFSGGNSGPIMSTILAYFGPGQPLYLLFFAGM 323
Query: 380 IAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
I FF Y+YT + +DV++ LK Q IP +RPGK T +L V+SRI V+GS +LA+
Sbjct: 324 IIFFTYFYTANVSFKTEDVADNLKNQNGFIPGIRPGKKTEEYLDYVVSRILVVGSGYLAL 383
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P ++ +TA+ F GTS+LI+V DT +++Q+ +++ +Y+ +
Sbjct: 384 VCLIPEMVRTELAITAY--FGGTSILIIVSVGMDTVQQIQSHLLAHQYEGL 432
>gi|337286836|ref|YP_004626309.1| preprotein translocase subunit SecY [Thermodesulfatator indicus DSM
15286]
gi|335359664|gb|AEH45345.1| preprotein translocase, SecY subunit [Thermodesulfatator indicus
DSM 15286]
Length = 438
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 245/416 (58%), Gaps = 22/416 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
+ L LL LA+ R+ + IP G+N A D+ ++ LD FSGG + RL IC+LG
Sbjct: 19 RILFLLAALAIYRVAVQIPTPGINTLALAALFDRAGGTIFGFLDMFSGGALRRLSICALG 78
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL + P ++++QK EG GR+K+ YTRY +V ++Q G + L
Sbjct: 79 IMPYISASIILQLLTVVFPSIKEMQK-EGPEGRRKIAYYTRYLTVAICLIQGFGIAVGLE 137
Query: 207 --------PYVNDFSTDW---VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
P V W +LT +TL T G+ F ++GE+I++ +GNG S+LIF I
Sbjct: 138 RMTAPNGDPIV--LFPGWGFKILTMITL-TAGTIFLMWLGEQITEHGIGNGISMLIFAGI 194
Query: 256 ISYLPASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
++ +P + RT + G + L I+ I +V V+++ A+R+IPI+YA R
Sbjct: 195 VAGIPGALIRTF-RLVKTGELSPVVLILILALIIAVVAFTVFMERAQRRIPIHYARRQVG 253
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R ++ YLP KVN +GV+P IF++S L P T+A F + +K PG Y
Sbjct: 254 RQIVGGQTTYLPLKVNMAGVIPPIFASSVLMFPATIANFVPLEFFQKMTHWFQPGSLLYE 313
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
++LI FF Y+YT + +P +V+E L++QG IP +RPG++TA FL VL+R++++G+
Sbjct: 314 ILFVVLIIFFCYFYTAIIFNPQEVAENLQKQGGFIPGIRPGRATAEFLDKVLTRLTLIGA 373
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P ++ + ++ + F GT++LI+VG A DT +++A ++++ Y +
Sbjct: 374 LYISAICVLPTILIKEFNVPFY--FGGTALLIVVGVAMDTMAQIEAHLLTRHYDGL 427
>gi|254492324|ref|ZP_05105497.1| preprotein translocase, SecY subunit [Methylophaga thiooxidans
DMS010]
gi|224462496|gb|EEF78772.1| preprotein translocase, SecY subunit [Methylophaga thiooxydans
DMS010]
Length = 451
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 256/440 (58%), Gaps = 24/440 (5%)
Query: 65 RGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN- 123
R AAAM + FG+ L + L +LG L + R G ++P+ G++ A +Q
Sbjct: 5 RQQAAAMLGNGGRFGE-----LKSRLLFVLGALIVYRFGTFMPVPGIDPAALAIMFEQQR 59
Query: 124 -SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
++L + FSGG + RL + +LGI+P+I+A I+ QLL ++PKL L K+EG AG++K+
Sbjct: 60 GTILDMFNMFSGGALERLSVFALGIMPYISASIIMQLLTVVHPKLAQL-KKEGAAGKRKI 118
Query: 183 LQYTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIG 235
QYTRY ++ A QA+G + L V D + +T+V L G+ F ++G
Sbjct: 119 TQYTRYGTLVLATFQALGIAIALESQSAAGVGVVIDPGFVFRITAVITLVTGTMFLMWLG 178
Query: 236 ERISDLKLGNGTSLLIFTSIISYLPASFGRTV--AEAFQDGNYIGLATIIISFILLVLGI 293
E+I++ +GNG SL+IF I++ LP++ G T+ A Q ++ +A ++++ + +
Sbjct: 179 EQITERGIGNGISLIIFAGIVAGLPSAIGGTLELARTGQLHTFLVIALMVLALAVTAF-V 237
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF- 352
V+V+ A+R+IP++YA R R + +LP K+N +GV+P IF++S + P T+A +
Sbjct: 238 VFVERAQRRIPVHYAKRQQGRKMIAGQVTHLPLKLNMAGVIPPIFASSIILFPATIAGWF 297
Query: 353 ---TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
G+ LK + ++PG Y+ L I FF ++YT L +P + +E L++ GA IP
Sbjct: 298 GSSDGMGWLKDISTLMSPGQPMYVMAYALAIIFFCFFYTALVFNPKETAENLQKSGAFIP 357
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPG+ TA ++ TV+ R+++ G+V++ + P + + + F GTS+LI+V
Sbjct: 358 GIRPGEQTAKYIDTVMGRLTLAGAVYITAVCLLPEFLILYWSVPFY--FGGTSLLIIVVV 415
Query: 470 ATDTARKVQAEIISQKYKNI 489
D +VQ+ ++SQ+Y+++
Sbjct: 416 VMDFVSQVQSHMMSQQYESL 435
>gi|383787020|ref|YP_005471589.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
gi|383109867|gb|AFG35470.1| protein translocase subunit secY/sec61 alpha [Fervidobacterium
pennivorans DSM 9078]
Length = 428
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 236/408 (57%), Gaps = 23/408 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS------LLSTLDSFSGGGIGRLGIC 143
FL LL + RLGIY+P+ G+N +A+ L + +LS D F+GG R +
Sbjct: 22 FLMLLVF----RLGIYVPVPGINIKAWGEALSKQGTGLAGGVLSFYDVFTGGAFSRFSVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
S+ + P+INA I+ QLLA I P L++L K EGE GRKK YT+ ++G A +Q+
Sbjct: 78 SMSVTPYINASIIMQLLASIIPSLKELLK-EGEEGRKKFQHYTKNLTIGLAALQSFVVSF 136
Query: 204 YL-RPYVNDFSTD-WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L Y + + W+ + V+ ++L G+ F +IG+RI++ +GNG S+LIF I+S
Sbjct: 137 GLANSYQGIIAVNKWLFSFVSTVSLVAGTMFLLWIGDRITEKGIGNGVSILIFAGIVSRY 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
PA F V + N G +I + +V+ I+YVQ+AER+I I YA+R R
Sbjct: 197 PAYFRTAV---LGNLNIFGWIFLIAVAVFMVVAIIYVQQAERRIKIEYATRMVGRRIYGG 253
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
S YLP KVN SGV+PIIF+ + +++P +A+ TG K +P + LL
Sbjct: 254 TSTYLPIKVNHSGVIPIIFAWAIVSIPEAIAQITGAQWAIKLFSMQSP---LMIIIYALL 310
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF Y+Y+ + +DP D+SE +KR G IP +R GK T ++ VL+R++ +G++FL +
Sbjct: 311 IFFFTYFYSVVVIDPKDISENIKRYGGFIPGIRAGKPTEEYITYVLNRVTFIGAIFLVGI 370
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ P ++E T + + G GTS LI VG A D A++++A +I + Y+
Sbjct: 371 SLLPYLVEGITRVNIWLG--GTSALIAVGVALDIAQQIEAHLIMRNYE 416
>gi|322418384|ref|YP_004197607.1| preprotein translocase subunit SecY [Geobacter sp. M18]
gi|320124771|gb|ADW12331.1| preprotein translocase, SecY subunit [Geobacter sp. M18]
Length = 435
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 248/424 (58%), Gaps = 17/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
F + FK P L K L L LA+ R+G +IP G++ +A Q +LL D FSG
Sbjct: 5 FQNIFKIPELKKKVLFSLAMLAVYRVGCHIPTPGIDAQALAQFFKAAQGTLLGMFDMFSG 64
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I++ I+FQLL + P ++ L K EG+AGRKK++QYTRY +V +
Sbjct: 65 GALEKLTVFALGIMPYISSSIIFQLLTVVVPSIEKLSK-EGDAGRKKIIQYTRYGTVVLS 123
Query: 195 IVQAIGQVLYLRPY--------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQ+ G + L V + + L +V LT G+AF ++GE++S+ +GNG
Sbjct: 124 VVQSFGISIGLEAMRGPAGELVVPNPGWSFRLMTVITLTAGTAFIMWLGEQMSEKGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIP 304
SL+IF I++ +P + G + + G +++ ++ + +V+++ +R+IP
Sbjct: 184 ISLIIFAGIVARIPNALGNSF-RLIKTGELSLFVLLLVLAVMFLVIAAVVFMERGQRRIP 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
I+YA R +S++LP KVN +GV+P IF++S + P T+ F + ++ A+
Sbjct: 243 IHYAKRVVGLKTVGAQSSHLPLKVNMAGVIPPIFASSIIMFPATVGNFIDVPWVQAASKQ 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L PG Y + I FF Y+YT + +P DV++ +K+QG +P +RPGK T+ FL V
Sbjct: 303 LAPGKLLYEFLFVAFIVFFCYFYTAVTFNPVDVADNVKKQGGYVPGIRPGKETSDFLDAV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L++++ G+++++ + P+++ +L + F GTS+LI VG DT +++A +I++
Sbjct: 363 LTKLTFAGAIYISAVCVLPSILIGKFNLPFY--FGGTSLLIAVGVGMDTLAQIEAHLITR 420
Query: 485 KYKN 488
Y+
Sbjct: 421 SYEG 424
>gi|325577147|ref|ZP_08147631.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|345429289|ref|YP_004822407.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|419802889|ref|ZP_14328069.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|419845516|ref|ZP_14368783.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
gi|301155350|emb|CBW14816.1| preprotein translocase membrane subunit [Haemophilus parainfluenzae
T3T1]
gi|325160729|gb|EGC72850.1| preprotein translocase subunit SecY [Haemophilus parainfluenzae
ATCC 33392]
gi|385189129|gb|EIF36598.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK262]
gi|386415384|gb|EIJ29916.1| preprotein translocase, SecY subunit [Haemophilus parainfluenzae
HK2019]
Length = 441
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 248/419 (59%), Gaps = 20/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IPL G++ ++Q +++ L+ FSGG + R
Sbjct: 17 GELKSRLLFVLGALIVYRIGSFIPLPGIDAAVLAQLVEQQKGTIIDMLNMFSGGALSRAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QAI
Sbjct: 77 ILALGIMPYISASIVMQLLATVSPALAEL-KKEGAAGQRKITKYTRYATVVFATIQAIAI 135
Query: 200 --GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
G L V + + T+V L G+ F ++GE+I++ +GNG S+L+F I++
Sbjct: 136 STGLPNMLPQLVPNIGFTFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIVA 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LP + TV +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 196 GLPHAIIETVEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGRQ 254
Query: 316 --GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGG 369
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 255 ILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNDLSMLLNPGQ 312
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R++
Sbjct: 313 PLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLT 372
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 373 LIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|425745952|ref|ZP_18863986.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
gi|425487098|gb|EKU53457.1| preprotein translocase, SecY subunit [Acinetobacter baumannii
WC-323]
Length = 440
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 17 RLMFLIGALLVFRLGAHIPLPGIDNVALAQFFKANEGTFLGLFNMFSGGALERMSILALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 77 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLFLALVQGIGMCAGLI 135
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 136 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 191
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V ++F G+ IGL + + ++ IV++++A+R+IP+NYA + R
Sbjct: 192 NLVIQSFTSVQNGQGSLIGLVVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTA 251
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 252 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 311
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 312 LYLMLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 371
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 372 IGAIYITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|169335649|ref|ZP_02862842.1| hypothetical protein ANASTE_02069 [Anaerofustis stercorihominis DSM
17244]
gi|169258387|gb|EDS72353.1| preprotein translocase, SecY subunit [Anaerofustis stercorihominis
DSM 17244]
Length = 418
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 231/407 (56%), Gaps = 11/407 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L L L + RLG +I + ++ A ++ NS+ L+ SG I ++
Sbjct: 14 LRKRILFTLAMLCIFRLGGFIAVPFIDTAAVDTMVNNNSMFGLLNIISGNNFRTFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL P L+ L EGE GRKK+ YTRY +V A++QA+G
Sbjct: 74 SITPYINASIILQLLTIAIPALERLS-HEGEEGRKKISSYTRYLTVVLALIQALGIAFSF 132
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ + S V +T G++F ++GE I++ +GNG S+LIF II+ +P++ G
Sbjct: 133 KQILTTDSAFTVAVVALTITAGTSFLMWLGENITEHGIGNGISILIFAGIIANIPSALGY 192
Query: 266 TVAEAFQDGNYIG-LATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+ E G+ G L I + F++LV+ G+V + E RKIP+ YA R R ++ +
Sbjct: 193 -LYEQVTSGSITGVLLVIFLVFVILVIAGVVEINEGVRKIPVQYAKRVVGRKMYGGQNTH 251
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTNILLI 380
+P K+N SGVMPIIF+++ P TLA F G AA ++A GG+ ++LI
Sbjct: 252 IPLKINQSGVMPIIFASTITMFPATLASFFPNWGFAAWLSKSLAW--GGAASTILYVILI 309
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF Y+YT + +PDDV++ LK+ G IP +RPG ST +LK L+R+ V GS+FL ++A
Sbjct: 310 VFFTYFYTIVTFNPDDVAKNLKQYGGFIPGIRPGHSTIVYLKRTLNRLMVAGSIFLVVIA 369
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P ++ L+ F GTS+LI+VG A +T +++ ++I + YK
Sbjct: 370 VLPIIVGNVMDLSL--QFGGTSLLIVVGVALETVNQLEQQMIMRNYK 414
>gi|90581698|ref|ZP_01237486.1| preprotein translocase SecY [Photobacterium angustum S14]
gi|330447017|ref|ZP_08310667.1| preprotein translocase SecY [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|90437113|gb|EAS62316.1| preprotein translocase SecY [Vibrio angustum S14]
gi|328491208|dbj|GAA05164.1| preprotein translocase SecY [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 441
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 248/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGAILIFRAGSFVPIPGIDAAVLASLFEQQKGTIIEMFNMFSGGALSRASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPY----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ + +V L G+ F ++GE+I++ +GNG SL+IFT I++ L
Sbjct: 138 GLPSMIPGLVHNPGPSFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q ++ L +I ISF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIAVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G+ L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQSEGLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|406035426|ref|ZP_11042790.1| preprotein translocase subunit SecY [Acinetobacter parvus DSM 16617
= CIP 108168]
Length = 452
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 244/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDNVALAQFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ +G L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGVGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPNLVI 207
Query: 265 RTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
++ + G+ IGLA + + ++ IV++++A+R+IP+NYA + R + +
Sbjct: 208 QSFSSVHNGQGSLIGLAVFGLLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTAQQTH 267
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSFYLP 374
LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG YL
Sbjct: 268 LPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQPLYLM 327
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +G++
Sbjct: 328 LFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFIGAI 387
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ ++ P V++ + + G GTS+LI+V D ++QA + S +Y +
Sbjct: 388 YITVVCLMPMVLQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDD 439
>gi|390934141|ref|YP_006391646.1| preprotein translocase subunit SecY [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569642|gb|AFK86047.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 418
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 229/395 (57%), Gaps = 9/395 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G++ L Q +L D SGG I ++ IVP+INA I+
Sbjct: 25 LLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDIISGGAFRDFTIFAMSIVPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + LR V +
Sbjct: 85 MQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYMTVVLALIQAIGMTIGLRSAVIQPNFLN 143
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ V LT G++F ++GERI++ +GNG+SL+IF I++ +P TV N
Sbjct: 144 LTIIVLTLTAGTSFLMWLGERITENGVGNGSSLIIFAGILARIPNMVYTTVQYVGAGTAN 203
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
G +I +++V+ I+ + E +R+IP+ YA R R +S ++P ++N +GV+P
Sbjct: 204 IFGAIAFLIVILVMVVSIILMSEGQRRIPVQYAKRVVGRKVYGGQSTHIPIRINMAGVIP 263
Query: 336 IIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+IF+ S L P +A F + A + + N G Y N+LLI FF Y+YT +
Sbjct: 264 LIFALSLLQFPQQIATFFPKSAFYAFTEKWLGTN--GWIYNILNVLLIIFFTYFYTAIIF 321
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P ++S+ +K+ G IP +RPGK T F+ V++R++ +GS+FLA++A P ++ T L
Sbjct: 322 NPIEISDNMKKYGGFIPGIRPGKPTTDFITRVMNRVTFVGSIFLALVAVLPVIMMNATGL 381
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI VG A +T ++++ ++I + Y+
Sbjct: 382 QLY--FGGTALLIAVGVALETMKQIEGQLIMRNYQ 414
>gi|374703937|ref|ZP_09710807.1| preprotein translocase subunit SecY [Pseudomonas sp. S9]
Length = 442
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 255/428 (59%), Gaps = 21/428 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L G+ L + + R+G +IP+ G+N + QN ++LS + FSGG + R+ I
Sbjct: 18 LWGRLRFLFMAIIVYRVGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL++ ++P+L+ L K+EGE+GR+K+ QYTR ++ A VQAIG +
Sbjct: 78 ALGIMPYISASIIMQLMSAVSPQLEQL-KKEGESGRRKISQYTRNGTLVLAFVQAIGMSV 136
Query: 204 YLRPYVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
L F+ D+ +VT G+ F ++GE+I++ +GNG S+LIF I++ LP
Sbjct: 137 GLASQGVAFAVDFSFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPR 196
Query: 262 SFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
+ G++ A Q D N L I + + ++ +V+++ +R+I ++YA R R +
Sbjct: 197 AIGQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQ 256
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTN 376
+++LP KVN +G +P IF++S L P +L + G+ L+ + A+ PG P N
Sbjct: 257 TSHLPLKVNMAGGIPAIFASSPLLFPASLGSWFGQSEGLGWLQDISQAIAPGQ----PLN 312
Query: 377 ILL----IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
ILL I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ +VL+R+++ G
Sbjct: 313 ILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDSVLTRLTLFG 372
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EF 491
++++ + P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ +
Sbjct: 373 AIYMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSNQYESLMKK 430
Query: 492 YDIDSYGS 499
++ YGS
Sbjct: 431 ANLKGYGS 438
>gi|145636644|ref|ZP_01792311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
gi|145270170|gb|EDK10106.1| preprotein translocase subunit SecY [Haemophilus influenzae PittHH]
Length = 436
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|16272739|ref|NP_438957.1| preprotein translocase subunit SecY [Haemophilus influenzae Rd
KW20]
gi|145630544|ref|ZP_01786324.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|145632156|ref|ZP_01787891.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145634791|ref|ZP_01790499.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145638401|ref|ZP_01794011.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148826558|ref|YP_001291311.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148827987|ref|YP_001292740.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229845848|ref|ZP_04465960.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260579889|ref|ZP_05847719.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260581615|ref|ZP_05849412.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|319775268|ref|YP_004137756.1| preprotein translocase subunit SecY [Haemophilus influenzae F3047]
gi|319897708|ref|YP_004135905.1| preprotein translocase secy subunit [Haemophilus influenzae F3031]
gi|378696998|ref|YP_005178956.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|386266475|ref|YP_005829967.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|1173419|sp|P43804.1|SECY_HAEIN RecName: Full=Protein translocase subunit SecY
gi|1573808|gb|AAC22456.1| preprotein translocase SecY subunit (secY) [Haemophilus influenzae
Rd KW20]
gi|144983934|gb|EDJ91376.1| preprotein translocase subunit SecY [Haemophilus influenzae R3021]
gi|144987063|gb|EDJ93593.1| preprotein translocase subunit SecY [Haemophilus influenzae 3655]
gi|145267957|gb|EDK07953.1| preprotein translocase subunit SecY [Haemophilus influenzae PittAA]
gi|145272730|gb|EDK12637.1| preprotein translocase subunit SecY [Haemophilus influenzae PittII]
gi|148716718|gb|ABQ98928.1| preprotein translocase subunit SecY [Haemophilus influenzae PittEE]
gi|148719229|gb|ABR00357.1| preprotein translocase subunit SecY [Haemophilus influenzae PittGG]
gi|229810852|gb|EEP46569.1| preprotein translocase subunit SecY [Haemophilus influenzae 7P49H1]
gi|260093173|gb|EEW77106.1| preprotein translocase, SecY subunit [Haemophilus influenzae RdAW]
gi|260095208|gb|EEW79099.1| preprotein translocase, SecY subunit [Haemophilus influenzae NT127]
gi|301169516|emb|CBW29117.1| preprotein translocase membrane subunit [Haemophilus influenzae
10810]
gi|309751541|gb|ADO81525.1| Protein translocase subunit SecY [Haemophilus influenzae R2866]
gi|309973711|gb|ADO96912.1| Protein translocase subunit SecY [Haemophilus influenzae R2846]
gi|317433214|emb|CBY81589.1| preprotein translocase SecY subunit [Haemophilus influenzae F3031]
gi|317449859|emb|CBY86070.1| preprotein translocase SecY subunit [Haemophilus influenzae F3047]
Length = 441
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|229844665|ref|ZP_04464804.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
gi|229812379|gb|EEP48069.1| preprotein translocase subunit SecY [Haemophilus influenzae 6P18H1]
Length = 441
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQIAERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|332142186|ref|YP_004427924.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407689208|ref|YP_006804381.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410863182|ref|YP_006978416.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
gi|327552208|gb|AEA98926.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Deep ecotype']
gi|407292588|gb|AFT96900.1| preprotein translocase subunit SecY [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410820444|gb|AFV87061.1| preprotein translocase subunit SecY [Alteromonas macleodii AltDE1]
Length = 439
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 244/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LKARLLFVLGAIVVFRLGSYVPIPGIDPAVLADLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL+ ++P + +L K+EGEAGR+K+ QYTRY ++ AI Q+IG
Sbjct: 77 ALGIMPYITASIIMQLLSVVHPPMVEL-KKEGEAGRRKISQYTRYLTLVLAIFQSIGIST 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L +N + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L I I L +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGDINLLFLLLIGAIVIALTYLVVFVERGQRRIVVNYAKRQQGRQVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G A L+ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNESTAWLQDVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 LYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVPFY--FGGTSLLIIVVVIMDFMAQVQTHLMSSQYESV 428
>gi|398353263|ref|YP_006398727.1| protein translocase subunit SecY [Sinorhizobium fredii USDA 257]
gi|390128589|gb|AFL51970.1| protein translocase subunit SecY [Sinorhizobium fredii USDA 257]
Length = 446
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 251/437 (57%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIPL G+N EAF S
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPEAFAQAFQGQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGALQAYGIAVGLESGSGLVNDPGWFFRISTVISLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I++ LP + T+ + G L+T +I++ I++V+ IV+V
Sbjct: 183 GIGNGISLIIFAGIVAALPGALAGTL----ELGRTGALSTPLILAIIVMVVAVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP TLA F A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANAA 298
Query: 357 ALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A AL G Y+ +IAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 TLPGWATTIVGALAHGQPLYMLFYGGMIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P ++ T + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVIGAIYLIFVCILPEILISQTGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|329889147|ref|ZP_08267490.1| preprotein translocase, SecY subunit [Brevundimonas diminuta ATCC
11568]
gi|328844448|gb|EGF94012.1| preprotein translocase, SecY subunit [Brevundimonas diminuta ATCC
11568]
Length = 458
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 258/440 (58%), Gaps = 22/440 (5%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG---NLD-Q 122
AA ++++ G F K L + L LG L + R+G Y+P+ G+N EAF+ N D Q
Sbjct: 4 AAEQLAANMNMGSFAKATELHKRLLFTLGALLVYRIGTYVPIPGINGEAFLAFFQNPDGQ 63
Query: 123 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
+L + FSGG + R+ + +L ++P+I+A I+ QL+ + P + L+K GE+GRK++
Sbjct: 64 RGILDMFNMFSGGAVERMAVFALNVMPYISASIIVQLMGAVYPPWEKLKKEGGESGRKQL 123
Query: 183 LQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERIS 239
QYTRY +V A+ Q+ G + L ++ +++++VT+LT G+ F ++GE+++
Sbjct: 124 NQYTRYLTVFLALAQSFGIAVGLNAQPGLIDQPGLFFIISTVTVLTGGTMFLMWLGEQVT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISF--ILLVLGIVYVQ 297
+GNG SL+IF I++ LP++ R + A Q G + I+ + +++ IV+++
Sbjct: 184 ARGVGNGISLIIFAGIVAVLPSTVARMLGLA-QQGQMSAFTLLFIAIMAVAVIVFIVFME 242
Query: 298 EAERKIPINYASRYT-SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
A+R++ I Y R +R G +RS +LP KVN++GV+P IF++S L LP T+A+FT A
Sbjct: 243 RAQRRLLIQYPKRQEGNRMTGGERS-FLPLKVNTAGVIPAIFASSLLMLPTTVAQFTANA 301
Query: 357 ALKK-------AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
L L G ++ +LI FF ++YT + +P+D +E L++ G +P
Sbjct: 302 NLPDWMSWLPLVTAQLTHGQPVFMILYAVLIVFFCFFYTSITFNPEDTAENLRKYGGFLP 361
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPGK TA +L VL+R++V+G+ ++ + P + + + + F GTS+LI+V
Sbjct: 362 GIRPGKRTAEYLDYVLTRLTVIGAAYITAVCLLPEFLVSSLGNSLY--FGGTSILIVVSV 419
Query: 470 ATDTARKVQAEIISQKYKNI 489
DT ++Q+ +++ +Y+ +
Sbjct: 420 TMDTVAQIQSHLLAHQYEGL 439
>gi|302336361|ref|YP_003801568.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
gi|301320201|gb|ADK68688.1| protein translocase subunit secY/sec61 alpha [Olsenella uli DSM
7084]
Length = 426
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 252/420 (60%), Gaps = 20/420 (4%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGV----NREAFVGNLDQNSLLSTLDSFSGGG 136
F+ P L K L + LAL R G Y+P GV EAF + ++ L+ FSGG
Sbjct: 9 FRIPELRNKILVSIAILALYRFGAYLPAPGVPFARMLEAFSAASASSGAIAVLNLFSGGA 68
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ R+ + SLGI+P+I AQI+ Q++ + P L +L K EGE+G++K+ QYTRY ++ A++
Sbjct: 69 LSRVSVFSLGIMPYITAQIILQMMQAVIPSLGELAK-EGESGQRKITQYTRYLTIVLALI 127
Query: 197 QAIGQVLYLRPYVNDFS--------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTS 248
AIG + + Y +FS D ++ V L G+ ++GE I+ +GNG S
Sbjct: 128 NAIGYLFLFKSYGINFSQMGFPEAIEDIIIVGV--LVTGAIIIMWLGEVITQRGVGNGMS 185
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYA 308
L+IF +I++ LP++ +V + G + T+++ F ++ + IVY++ +R+IP+ YA
Sbjct: 186 LIIFANIMAGLPSALISSVNTS-SAGTIMTALTLLVIFAIIPV-IVYIERGQRRIPVQYA 243
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNP 367
R R +S YLP KVN++GV+PIIF+++ L LP LA F + ++ A AL+
Sbjct: 244 KRVVGRKVMGGQSTYLPIKVNTAGVVPIIFASAILYLPAQLAVFFPNVGWIQAFANALSS 303
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G ++ +++LI FF Y+YT + +P++ S+QL++ G IP VRPG TAA++K VL
Sbjct: 304 GWVNWI-LSVVLIVFFAYFYTAMVFNPEETSDQLRKSGGFIPGVRPGGPTAAYIKGVLDH 362
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I++ G++F+A +A P+++ T + + F GTSVLI+VG A DT ++++++ Y+
Sbjct: 363 ITLPGALFMAAIAVVPSILFALTGNSLLQAFGGTSVLIMVGVAMDTISQLESQLKMHNYE 422
>gi|68249394|ref|YP_248506.1| preprotein translocase subunit SecY [Haemophilus influenzae
86-028NP]
gi|68057593|gb|AAX87846.1| preprotein translocase SecY subunit [Haemophilus influenzae
86-028NP]
Length = 441
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDATVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|84394570|ref|ZP_00993274.1| preprotein translocase SecY [Vibrio splendidus 12B01]
gi|86148808|ref|ZP_01067075.1| preprotein translocase SecY [Vibrio sp. MED222]
gi|218710729|ref|YP_002418350.1| preprotein translocase subunit SecY [Vibrio splendidus LGP32]
gi|84374790|gb|EAP91733.1| preprotein translocase SecY [Vibrio splendidus 12B01]
gi|85833398|gb|EAQ51589.1| preprotein translocase SecY [Vibrio sp. MED222]
gi|218323748|emb|CAV20102.1| SecY, Preprotein translocase subunit SecY [Vibrio splendidus LGP32]
Length = 444
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 247/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ DQ +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFDQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G+T+ +A Q ++ L I +SF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLFIAVLSFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGS 370
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 257 AAQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQP 316
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTL 376
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 377 AGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|358010441|ref|ZP_09142251.1| preprotein translocase subunit SecY [Acinetobacter sp. P8-3-8]
Length = 452
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALVVFRLGAHIPLPGIDNVALERFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGIGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + ++T L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V +AF + IGLA + I ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQAFTSVDNGQSSLIGLAVFGLLSIAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A AL+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGFVKRALQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +V+E LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLVLFGALIIFFCYFYTALVFSPKEVAENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVICLMPMILQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|389795115|ref|ZP_10198250.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
gi|388431248|gb|EIL88332.1| preprotein translocase subunit SecY [Rhodanobacter fulvus Jip2]
Length = 440
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 248/411 (60%), Gaps = 18/411 (4%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
++G L + RLG +IP+ GVN A ++ N L+ + FSGG + R + +LG++P+I+
Sbjct: 25 VIGALVVFRLGSFIPVPGVNPAAMTSLVNGNGLMDMFNMFSGGALERFSVFALGVIPYIS 84
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------ 206
A IV Q++ + P LQ L+K EGE+G++K+ YTR+ +VG A+ Q+ G + L+
Sbjct: 85 ASIVIQMMGSVVPSLQALRK-EGESGKRKMTMYTRFGTVGLALFQSFGIAVALQKQVAAG 143
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V +++ SV LT G+ F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 144 GAPVVYHPGFGFIMASVIGLTAGTMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPEAVV 203
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
T+ A +G L +++ ++L + +V+++ A+R+I +NYA R ++ +S+
Sbjct: 204 HTLGMA-NNGELTVLKLLMVFGLVLAVTAFVVFMERAQRRITVNYARRGGGQNAYQNQSS 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNIL 378
+LP K+N SGV+P IF++S L P T + G L++ +LNPG Y +
Sbjct: 263 HLPLKINMSGVIPPIFASSLLMFPATAITWFGTGHQSRWLQELTQSLNPGEPLYDIVYSI 322
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
L+ F ++YT + + D+ ++ LKR GA IP +RPG++TA+++ V++R++ +G+++L +
Sbjct: 323 LVIGFAFFYTAIVFNADETADNLKRSGALIPGIRPGRATASYVDAVMTRLTGVGALYLVL 382
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P+ ++ H+ + F GTS+LI+V D ++QA ++S +Y+++
Sbjct: 383 VCLVPSFMQSFWHVPFY--FGGTSLLIVVVVVMDFTSQIQAHLVSHQYESL 431
>gi|170748616|ref|YP_001754876.1| preprotein translocase subunit SecY [Methylobacterium radiotolerans
JCM 2831]
gi|170655138|gb|ACB24193.1| preprotein translocase, SecY subunit [Methylobacterium
radiotolerans JCM 2831]
Length = 448
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 252/436 (57%), Gaps = 21/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++FG K L + LG L + RLG YIP+ G++ E F N Q +
Sbjct: 4 AAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +L I+P+I+A I+ QLL + P L+ L K+EGE+GRK + Q
Sbjct: 64 VLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVIPSLEAL-KKEGESGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR--PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
YTRY +V A+VQ+ G + L+ D ++ ++V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLASTVITLTGGTLFLMWLGEQITSRG 182
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII-----SFILLVLGIVYVQ 297
+GNG+SL+IF I+++LP + +A A + G L+ II + + LV IV+++
Sbjct: 183 IGNGSSLIIFAGIVAHLPVA----IAGALELGRTGALSPAIILGVGVAAVALVYFIVFME 238
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--- 354
A+R++ INY R ++++LP K+N+SGV+P IF++S L LP T A F+
Sbjct: 239 RAQRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGG 298
Query: 355 -IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
L L G ++ LI FF ++YT + +P + ++ LK+ G IP +RP
Sbjct: 299 ATGWLGTVTAYLGHGTPLFMVLYAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRP 358
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TAAF+ VL+RI+V+G+++L + P ++ +++ A GF GTS+LI+V DT
Sbjct: 359 GERTAAFIDKVLTRITVIGALYLTFVCLCPEIL--SSYAAASLGFGGTSLLIVVSVTMDT 416
Query: 474 ARKVQAEIISQKYKNI 489
++ +++ +Y+ +
Sbjct: 417 VAQIHGHLMAHQYEGL 432
>gi|158319563|ref|YP_001512070.1| preprotein translocase subunit SecY [Alkaliphilus oremlandii
OhILAs]
gi|158139762|gb|ABW18074.1| preprotein translocase, SecY subunit [Alkaliphilus oremlandii
OhILAs]
Length = 424
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 237/410 (57%), Gaps = 17/410 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L LA+ RLG IP+ GV+ ++ LLS D SGG G + I +L I
Sbjct: 17 KILYTFMMLAIFRLGSVIPVPGVDINYVKSIVNNAGLLSFFDLVSGGAFGNMTIFALSIS 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRP 207
P+I + I+ QLL P L+ L K EGE G KK+ QY RYA++ A++QA G V R
Sbjct: 77 PYITSSIIMQLLTIAIPSLEALAK-EGEEGSKKIAQYQRYATIILALIQATGISVGLFRG 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ + T ++ + LT G+AF ++GE+I++ +GNG SLLIF II+ LP+S T
Sbjct: 136 ALINQDTFSIIVVILTLTAGTAFLMWLGEQITEKGIGNGISLLIFAGIIASLPSSLFTTF 195
Query: 268 A--EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
A +A Q N + + I+ I +++ +V ++ RKIP+ YA R R +S+++P
Sbjct: 196 ALTKAGQI-NPLAIILFIVIAIAMIVAVVAIEAGTRKIPVQYAKRVVGRKMYGGQSSHIP 254
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN--------PGGSFYLPTNI 377
KVN SGVMP+IF+ S L P T+A F G + A LN PG Y +
Sbjct: 255 LKVNQSGVMPVIFAMSLLQFPHTIAYFIG--SEGGFAKFLNTWLSPTGMPGVFIYNLLSA 312
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
+LI FF Y+YT + +P ++S +K+ G IP +RPGK TA ++ +L+RI++ G+VFLA
Sbjct: 313 VLIIFFTYFYTAITFNPVEISNNMKQNGGFIPGIRPGKPTADYINKILTRITLSGAVFLA 372
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I+ P ++ TH+ F GT+++I+VG A +T ++++A+++ + Y+
Sbjct: 373 IITIVPTIVLGITHIPI--SFGGTTIIIIVGVALETMKQIEAQLLMRHYQ 420
>gi|337288330|ref|YP_004627802.1| preprotein translocase subunit SecY [Thermodesulfobacterium sp.
OPB45]
gi|334902068|gb|AEH22874.1| preprotein translocase, SecY subunit [Thermodesulfobacterium
geofontis OPF15]
Length = 436
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 242/406 (59%), Gaps = 20/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ R ++IP G+N EAF+ Q S L LD FSGG + R IC+LG++P+I+A
Sbjct: 27 LAIYRFAVHIPTPGINGEAFLSLFKQASGTLFGFLDIFSGGALRRFSICALGVMPYISAS 86
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QL+ I P +++L K EG G++K+ YTRY +V ++Q G L L
Sbjct: 87 IILQLMTVIYPSIKELYK-EGPEGKRKLAYYTRYLTVVICLIQGFGISLGLERMTAPNGI 145
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P VN+ + +TS+ LT G+ F ++GE++++ +GNG S++IF I++ + + RT
Sbjct: 146 PIVNEPGWLFRITSMISLTAGTMFLVWLGEQMTEHGIGNGISIIIFAGIVAGIFPAIART 205
Query: 267 VAEAFQDGNYIGLATIIISFILLVLGIV----YVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + Q G + + I F L++GI+ +++ A+R+IPI+YA R R +S
Sbjct: 206 L-KFVQTGEFSVFSLFFILF--LIVGILAFTCFMELAQRRIPIHYAKRQVGRQIIGGQST 262
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLP K+N++GV+P IF++S L P T+A F I +K A L PG FY LLI F
Sbjct: 263 YLPLKINTAGVIPPIFASSILMFPATIANFIPIDYFQKVAAFLRPGAIFYEVLFALLIIF 322
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F Y+YT + +P DV++ LK+ G IP +RPG++T F+ +L+RI+++G++++A +
Sbjct: 323 FCYFYTAVIFNPKDVADNLKKWGGFIPGIRPGRATEEFIDKILARITLIGALYVAFICVL 382
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
P + +L + F GTS+LI+VG A D ++A ++++ Y+
Sbjct: 383 PTFLITKLNLPFY--FGGTSLLIVVGVAMDIMGHIEAHLLTRHYET 426
>gi|50086195|ref|YP_047705.1| preprotein translocase subunit SecY [Acinetobacter sp. ADP1]
gi|49532171|emb|CAG69883.1| secretion protein [Acinetobacter sp. ADP1]
Length = 452
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALLVFRLGAHIPLPGIDNVALARFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ +G L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGVGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYIPAVTSLVAGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V +AF G+ IG+ + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NQVIQAFTSVQNGQGSLIGIVVFALLSLAVLAAIVFIEKAQRRIPVNYAQKQQGRRIFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLMLFGTLIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVVCLMPMILQNSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|333895234|ref|YP_004469109.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
gi|332995252|gb|AEF05307.1| preprotein translocase subunit SecY [Alteromonas sp. SN2]
Length = 439
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 245/415 (59%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LKARLLFVLGAIVVFRLGSYVPIPGIDPAVLADLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL+ ++P + +L K+EGEAGR+K+ QYTRY ++ AI Q+IG
Sbjct: 77 ALGIMPYITASIIMQLLSVVHPPMIEL-KKEGEAGRRKISQYTRYLTLVLAIFQSIGIST 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L +N + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLINGLVLNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L + + I L +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGDINLLFLLLMAVIVIALTYLVVFVERGQRRIVVNYAKRQQGRQVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G A L+ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNMAGVIPPIFASSIILFPGTIAGWFGQNESTAWLQDVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 LYATAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYIDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVPFY--FGGTSLLIIVVVIMDFMAQVQTHLMSSQYESV 428
>gi|260914660|ref|ZP_05921126.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
gi|260631259|gb|EEX49444.1| preprotein translocase [Pasteurella dagmatis ATCC 43325]
Length = 441
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 252/419 (60%), Gaps = 20/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +L L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 17 GELKNRLLFVLIALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L +L K+EGE GR+K+ +YTRY+++ A +QA+G
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAEL-KKEGETGRRKISKYTRYSTLVLATLQAVGI 135
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L V + + +T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 136 ATGLPNMLPGLVPNLDIWFYITAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LP++ G+T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 196 GLPSAIGQTIEQARQ-GQMHPLVLLLIAVIVFAVTYFVVFVERGQRRIKVEYAKRQQGRQ 254
Query: 316 --GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGG 369
GG S +LP KVN +GV+P IF++S + P TLA++ G + L ++ L+PG
Sbjct: 255 ILGG--HSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHPGQ 312
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++
Sbjct: 313 PLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLT 372
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++G +++ + P V+ ++ + F GTS+LI+V D +VQ+ ++S KY++
Sbjct: 373 LIGGLYITFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIAQVQSHLMSTKYES 429
>gi|381158299|ref|ZP_09867532.1| preprotein translocase, SecY subunit [Thiorhodovibrio sp. 970]
gi|380879657|gb|EIC21748.1| preprotein translocase, SecY subunit [Thiorhodovibrio sp. 970]
Length = 450
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 243/416 (58%), Gaps = 19/416 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + +LG L + R+G +IP+ GVN EA DQN S+L + FSGG + R I +LG
Sbjct: 24 RLMFVLGALLVYRIGTFIPVPGVNPEALAALFDQNQGSILDMFNMFSGGALQRASILALG 83
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P+L+ L K+EGEAGR+K+ QYTRY +V A QAIG + L+
Sbjct: 84 IMPYISASIIMQLMSSVIPQLEQL-KKEGEAGRRKITQYTRYGTVVLASFQAIGISMALQ 142
Query: 207 -------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
V +V T+ L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 143 GQTAGGSAIVVTHGVGFVFTAAVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 202
Query: 260 PASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G T+ E + G N I + + +L+ +V+V+ +R+I +NYA R R
Sbjct: 203 PSAVGGTL-ELVRTGEMNAIAVLALFALALLVTAFVVFVERGQRRITVNYARRQQGRKMM 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTL ++ G + L +PG Y+
Sbjct: 262 AAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGQSEDLRWLADLTAKFSPGEPLYV 321
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L + D ++ LKR GA IP +RPG+ TA ++ TV++R++ +G+
Sbjct: 322 LAYSAAIIFFCFFYTALVFNAKDTADNLKRSGAFIPGIRPGEQTARYIDTVMTRLTAIGA 381
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 382 LYITAVCLLPEFLIVGWNVPFY--FGGTSLLIVVVVVMDFMAQVQAHLVSHQYEGL 435
>gi|333896208|ref|YP_004470082.1| preprotein translocase subunit SecY [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111473|gb|AEF16410.1| preprotein translocase, SecY subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 418
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 229/395 (57%), Gaps = 9/395 (2%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G++ L Q +L D SGG I ++ I+P+INA I+
Sbjct: 25 LLVFRLGSHIPVPGIDPNQIKNILGQGTLFGFFDIISGGAFRDFTIFAMSIIPYINASII 84
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL P L+ + K EGE GRKK+ QYTRY +V A++QAIG + LR V +
Sbjct: 85 MQLLTIAIPSLEQMAK-EGEEGRKKIAQYTRYMTVVLALIQAIGMTIGLRSAVIQPNFLN 143
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ V LT G++F ++GERI++ +GNG+SL+IF I++ +P TV N
Sbjct: 144 LTIIVLTLTAGTSFLMWLGERITENGVGNGSSLIIFAGILARIPNMVYTTVQYVGAGTAN 203
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
G +I +++V+ I+ + E +R+IP+ YA R R +S ++P ++N +GV+P
Sbjct: 204 IFGAIAFLIVILVMVVSIILMSEGQRRIPVQYAKRVVGRKVYGGQSTHIPIRINMAGVIP 263
Query: 336 IIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
+IF+ S L P +A F + A + + N G Y N+LLI FF Y+YT +
Sbjct: 264 LIFALSLLQFPQQIATFFPKSAFYAFTEKWLGTN--GWIYNILNVLLIIFFTYFYTAIIF 321
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+P ++S+ +K+ G IP +RPGK T F+ V++R++ +GS+FLA++A P ++ T L
Sbjct: 322 NPIEISDNMKKYGGFIPGIRPGKPTTDFITRVMNRVTFVGSIFLALVAVLPVIMMNATGL 381
Query: 453 TAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI VG A +T ++++ ++I + Y+
Sbjct: 382 QLY--FGGTALLIAVGVALETMKQIEGQLIMRNYQ 414
>gi|238928135|ref|ZP_04659895.1| preprotein translocase subunit SecY [Selenomonas flueggei ATCC
43531]
gi|238884095|gb|EEQ47733.1| preprotein translocase subunit SecY [Selenomonas flueggei ATCC
43531]
Length = 418
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 237/419 (56%), Gaps = 20/419 (4%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFSQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVVLAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDGNYIGLATI---------IISFILLVLGIVYVQEAERKIPINYA 308
LP + G +A Y+ TI +I+ ++V +++++ R+IPI YA
Sbjct: 185 ALPKNIGTILA-------YVKAGTISYFSVFAFGVIALAMIVF-VIHIETGFRRIPITYA 236
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
R + S+++PFKVN +GV+PIIF++S L P T+A+F I +K AA L G
Sbjct: 237 KRVVGGRTAMGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFVDIPWVKTAASYLEWG 296
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
+L+I FF Y+YT + + D+++ LK+ G +P +RPG+ TA +L VL+RI
Sbjct: 297 KPLQTTLYVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQVTADYLDYVLTRI 356
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ G+ FLA +A P +I + TH+ F GT++LI+VG A T +++++ I+ + Y+
Sbjct: 357 TLAGAFFLAFIAVLPNLIAEATHIQGVY-FGGTALLIVVGVALQTMKQIESMIVMRHYE 414
>gi|359786100|ref|ZP_09289240.1| preprotein translocase subunit SecY [Halomonas sp. GFAJ-1]
gi|359296593|gb|EHK60841.1| preprotein translocase subunit SecY [Halomonas sp. GFAJ-1]
Length = 443
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 244/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ + +LGI+P+I+A I+ Q
Sbjct: 32 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSVLALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
L+ ++P L+ L K+EGEAGR+K+ QYTRY +V A VQA G + L Y DFS
Sbjct: 92 LMTAVSPHLEQL-KKEGEAGRRKISQYTRYGTVLLAFVQATGMSVGLASQGIAYSADFS- 149
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T++ G+ F ++GE+I++ +GNG SLLIF I++ LP++ G+ A +G
Sbjct: 150 -FYFTAIITFVSGAVFMMWLGEQITEKGIGNGISLLIFAGIVAGLPSAVGQAFELARNEG 208
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + L + + I V +V+++ +R++ +NY R +S+YLP KVN +G
Sbjct: 209 AWNVLPLLALSVLGIATVAFVVFIERGQRRLKVNYPRRQVGNKMYAGQSSYLPLKVNMAG 268
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P ++ ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 269 VIPAIFASSILLFPASIGQWVGAGEGMEWLQRASQALGPGQPLYILLFGAAVVFFCFFYT 328
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 329 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYIDKVMTRLTLFGALYITAVSLMPQFLIV 388
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GTS+LI+V D +VQ+ ++S +Y ++ + ++ YGS
Sbjct: 389 AWNVPFF--FGGTSLLIVVVVIMDFMAQVQSHLMSHQYDSVMKKSNLKGYGS 438
>gi|227821775|ref|YP_002825745.1| preprotein translocase subunit SecY [Sinorhizobium fredii NGR234]
gi|227340774|gb|ACP24992.1| secretion protein SecY [Sinorhizobium fredii NGR234]
Length = 446
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 251/437 (57%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIPL G+N AF +
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPAAFAQAFQGQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGALQAYGIAVGLESGNGLVNDPGWFFRISTVISLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I+++LP + T+ + G L+T +I++ I++V+ IV+V
Sbjct: 183 GIGNGISLIIFAGIVAHLPTALAGTL----ELGRTGALSTPLILAIIIMVVAVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP TLA F A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANAA 298
Query: 357 ALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A AL G Y+ +IAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 TLPGWATTIVGALAHGQPLYMLFYGAMIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P ++ T + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVIGAIYLIFVCILPEILISQTGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|153009306|ref|YP_001370521.1| preprotein translocase subunit SecY [Ochrobactrum anthropi ATCC
49188]
gi|404319008|ref|ZP_10966941.1| preprotein translocase subunit SecY [Ochrobactrum anthropi CTS-325]
gi|151561194|gb|ABS14692.1| preprotein translocase, SecY subunit [Ochrobactrum anthropi ATCC
49188]
Length = 446
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 255/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + +V++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFVVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +II I+L+
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIILAIVLIAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|260886896|ref|ZP_05898159.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|330839306|ref|YP_004413886.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|260863495|gb|EEX77995.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
gi|329747070|gb|AEC00427.1| preprotein translocase, SecY subunit [Selenomonas sputigena ATCC
35185]
Length = 418
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 233/411 (56%), Gaps = 6/411 (1%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+ +K P L K + L A+ RLG +IP+ GV+ A +L LD FSGG
Sbjct: 7 NIYKIPELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQLFATGNLFGLLDLFSGGAFS 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+ I ++ I P+INA I+ QLL + P L+ K EG+ G KK + TRY +V A QA
Sbjct: 67 KFSIFAMSITPYINASIIMQLLTVVIPTLEQWSK-EGQEGHKKTTKVTRYLTVALAFFQA 125
Query: 199 IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+G + L+ + + S +L LT G+ F +IGE+I+ +GNG SL+IF I++
Sbjct: 126 VGMSIGLKQAILNPSPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAA 185
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G T+ Q G +Y + +L+++ ++Y+QE R++PI+YA R +
Sbjct: 186 LPKNLG-TIYSYLQAGTISYFNAFVFAVIALLMIVFVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
S+++P KVN +GV+PIIF++S L P T+A+F + + A G
Sbjct: 245 YGGSSSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVPWVTTLAGYFAWGTPLQTSIY 304
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LLI FF Y+YT + + D++E LK+ G IP +RPGK T +L TV++RI++ G+ FL
Sbjct: 305 ALLIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGKPTEEYLDTVMTRITLAGAFFL 364
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A +A P ++ TH+ F GT++LI+VG A +T +++++ ++ + Y+
Sbjct: 365 AFIAVLPNLVAGATHIEGVY-FGGTALLIVVGVALNTMKQIESMVVMRHYQ 414
>gi|157363462|ref|YP_001470229.1| preprotein translocase subunit SecY [Thermotoga lettingae TMO]
gi|157314066|gb|ABV33165.1| preprotein translocase, SecY subunit [Thermotoga lettingae TMO]
Length = 429
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 242/419 (57%), Gaps = 22/419 (5%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF------VGNLDQNSLLSTLDSFSG 134
FK P L + L + L + RLGIYIP+ G+N +A+ G +LS D F+G
Sbjct: 9 FKIPELRNRILFTVATLIVFRLGIYIPIPGINIQAWGEAFKRFGESAAGGILSFYDVFTG 68
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + I ++ + P+INA IV QLL+ + PKL+DL REGE GRKK QYTR +V
Sbjct: 69 GALENFSIFAMSVTPYINASIVLQLLSSVIPKLRDLL-REGEEGRKKFAQYTRNLTVILG 127
Query: 195 IVQAI---GQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTS 248
Q+ ++ P + + + + + S + G+ F ++G+RI++ +GNG S
Sbjct: 128 AFQSFIVSFSLVRQNPDIVSYGLNPFAFTMISTISMLAGTMFLLWLGDRITERGIGNGIS 187
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYA 308
+LIF I++ P FGR + N G +I+ ++ + GIVYVQ+AER+I I YA
Sbjct: 188 ILIFAGIVARYPNYFGRILLGRL---NIFGWIFLIVVSLVTIAGIVYVQQAERRINIQYA 244
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
SR T R S Y+P KVN GV+PIIF+++ + +P +A+ G L++ L PG
Sbjct: 245 SRVTGRRIYGGASTYIPVKVNQGGVIPIIFASAIIMIPAAIAQMAGWETLRRI---LGPG 301
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
Y+ LL+ FF Y+Y+ + DP DVSE +++ G IP +RPGKST +++ +++R+
Sbjct: 302 SLLYVVIYGLLVFFFTYFYSVVVFDPHDVSENVRKYGGFIPGIRPGKSTEEYIQRIINRV 361
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ +G++FL ++A P +++ T++ G GTS LI VG A D ++++A +I + Y+
Sbjct: 362 TFMGALFLVLIALLPHLVQAVTNVDIIVG--GTSTLIAVGVALDVVQQMEAHLIMRHYE 418
>gi|374578966|ref|ZP_09652060.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374415048|gb|EHQ87483.1| preprotein translocase, SecY subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 428
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 245/414 (59%), Gaps = 24/414 (5%)
Query: 92 KLLGYLALS----RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
K +GY L R+G +IP ++R+ ++++ +D+ SGG L + +L I
Sbjct: 17 KKIGYTLLMFLIFRIGAHIPTPFIDRDTLNQMFGSGAMMNFMDTISGGSFKSLSVFALSI 76
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + P L+ L K EG+ GRKK+ QYTRY++VG +QA+G +R
Sbjct: 77 TPYITASIILQLLTIVIPTLERLSK-EGDYGRKKITQYTRYSTVGLGFIQALGLTYGIRA 135
Query: 208 YVNDFS--TDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
VN S W L +LT G+AF +IGE I++ +GNG SL+IF I+S +P++
Sbjct: 136 AVNISSPAMQWPTYLLIALVLTAGTAFLMWIGEAITEKGIGNGISLIIFAGIVSRVPSAI 195
Query: 264 GRTVAEAFQDGNYIGLATII----ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
R++ + + G L+ I ++FI G++YVQE +R++ + YA R R
Sbjct: 196 -RSLWDMLRVGEINILSIIGLILIVAFI--TAGVIYVQEGQRRVTVQYAKRVVGRRVYGG 252
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAALKKAAVALNPGGSFYLPTN 376
+S+++P KVN +GV+P+IF+ S LA P T+A +T G A ++N G +P
Sbjct: 253 QSSHIPLKVNQAGVIPVIFAMSLLAFPQTIASWTPTSGFARFVNTWFSMN-GSITSIPYL 311
Query: 377 IL---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+L LI FF Y+YT + +P DV++ LK+ G IP +RPG+ TA +L VL+RI++ G
Sbjct: 312 LLYGALILFFTYFYTSITFNPVDVADNLKKYGGFIPGLRPGRPTAEYLSKVLNRITLAGG 371
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA++A P ++ T L F GTS+LI+VG A DT ++++++++S+ Y+
Sbjct: 372 LFLALIAVLPTLVIGLTGLKNIY-FGGTSLLIVVGVALDTMKQIESQLMSRHYQ 424
>gi|386286900|ref|ZP_10064081.1| preprotein translocase subunit SecY [gamma proteobacterium BDW918]
gi|385280052|gb|EIF43983.1| preprotein translocase subunit SecY [gamma proteobacterium BDW918]
Length = 442
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 269/432 (62%), Gaps = 26/432 (6%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLG 141
G L + LL + + R+G +IP+ G+N + N +Q ++L + FSGG + R+
Sbjct: 16 GELMARLRFLLLAIIVYRIGTHIPVPGINPDQLAALFNQNQGTVLGLFNMFSGGALERMS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QL++ ++P+L+ L K+EGE+GR+++ QYTRY +V A++QA+G
Sbjct: 76 ILALGIMPYISASIIMQLMSAVSPQLEAL-KKEGESGRRQISQYTRYLTVVLALLQAVGM 134
Query: 202 VLYLR----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L Y DFS +V +V L G+ F ++GE++++ +GNG S+LIF I++
Sbjct: 135 TVGLANQGLAYSADFSFYFV--AVVSLVTGAIFMMWLGEQLTERGVGNGISMLIFAGIVA 192
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ G+++ +A Q + N + L +++ + +V +V+++ +R+I +NYA +
Sbjct: 193 GLPSAVGQSLEQARQGELNVLVLLAVLVLAVAVVYLVVFIERGQRRITVNYAKQQRGNKM 252
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSF 371
+S++LP KVN +GV+P IF++S L P ++A++ G + L++ A+A+ PG
Sbjct: 253 YQAQSSHLPMKVNMAGVIPAIFASSILLFPASIAQWVGQSGEGMEWLQELALAIGPGQ-- 310
Query: 372 YLPTNIL----LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
P NI+ LI FF ++YT L +PD+V++ LKR GA +P +RPGK TA ++ VL+R
Sbjct: 311 --PLNIIMFTALIVFFCFFYTALMFNPDEVADNLKRSGAFLPGIRPGKQTANYIDGVLTR 368
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ GS+++A + P + ++ + G GTS+LI+V D +VQ+ ++S +Y
Sbjct: 369 LTMFGSMYIAGVCLLPQFLVVMWNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYD 426
Query: 488 NI-EFYDIDSYG 498
++ + ++ +YG
Sbjct: 427 SVLKKANLKNYG 438
>gi|119478111|ref|ZP_01618190.1| preprotein translocase, SecY subunit [marine gamma proteobacterium
HTCC2143]
gi|119448817|gb|EAW30060.1| preprotein translocase, SecY subunit [marine gamma proteobacterium
HTCC2143]
Length = 441
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 252/409 (61%), Gaps = 13/409 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + DQ+ ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 32 RIGTHIPVPGMNPDQIAAMFDQSQGTVLGLFNMFSGGALERMSILALGIMPYISASIIMQ 91
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST--DW 216
L++ ++P+L+ L K+EGEAGR+K+ QYTRY +V A VQ G V+ L +S +
Sbjct: 92 LMSAVSPQLEAL-KKEGEAGRRKISQYTRYLTVVLATVQGTGMVVGLANSGMAYSVGITF 150
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
T+V L G+ F ++GE++++ +GNG SLLIF I++ LP++ G+++ +A Q + N
Sbjct: 151 YFTAVVSLVTGAVFMMWLGEQVTERGIGNGISLLIFAGIVAGLPSAIGQSIEQARQGEIN 210
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ L I+ + ++ +V+++ +R+I +NYA R + ++LP KVN +GV+P
Sbjct: 211 ILILLLILTLAVAVIYLVVFIERGQRRITVNYAKRQQGNKVTQGQQSHLPMKVNMAGVIP 270
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQ 391
IF++S L P ++A++ G+ L++ ++A+ PG + +LI FF ++YT L
Sbjct: 271 AIFASSLLLFPASIAQWFGQSEGMEWLQEVSLAIGPGQPLNILLFTMLIVFFCFFYTALM 330
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
+P ++++ LKR GA +P +RPG TA ++ V++R+++ GS+++A++ P + +
Sbjct: 331 FNPKEMADNLKRSGAFLPGIRPGDQTANYIDNVMTRLTMFGSLYIAMVCLLPQFLVVMWN 390
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN-IEFYDIDSYGS 499
+ + G GTS+LI+V D +VQ+ ++S +Y+ ++ ++ YG
Sbjct: 391 VPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYEGMMKKANLKGYGK 437
>gi|407693279|ref|YP_006818068.1| preprotein translocase subunit SecY [Actinobacillus suis H91-0380]
gi|407389336|gb|AFU19829.1| preprotein translocase subunit SecY [Actinobacillus suis H91-0380]
Length = 440
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 251/418 (60%), Gaps = 16/418 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIVQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L+ V + S + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ +A Q G L ++++ I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQ-GEISPLVLLLVAVIAFAVTYFVVFVERGQRRIVVNYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF 371
RS++LP KVN +GV+P IF++S + P ++ ++ G+ L + L PG
Sbjct: 254 MAPARSSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSEGLEWLFDLSQLLQPGQPL 313
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++
Sbjct: 314 YIVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLI 373
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P +I T+ GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 GALYITFVCLVPYII--TSLWKVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSLQYDSV 429
>gi|406899252|gb|EKD42574.1| hypothetical protein ACD_73C00099G0001, partial [uncultured
bacterium]
Length = 423
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 237/400 (59%), Gaps = 12/400 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+G+++P G+N +A Q ++ + FSGG + + + +LGI+P+I+A I+
Sbjct: 14 LGIYRIGVFVPTPGINVDALKSIFSQGTVFEIFNLFSGGALQQFSVFALGIMPYISASII 73
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG------QVLYLRPYVN 210
QLL P L+ L K EG+AGR+K+ QYTRY +V +++Q G Q L P V
Sbjct: 74 LQLLTVSIPALEKLSK-EGDAGRRKITQYTRYGTVVLSLIQGFGISFGLEQQQVLLPGVG 132
Query: 211 DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
S + +T++ L G+AF ++GE+IS+ +GNG SL+IF I++ +P +
Sbjct: 133 GLS--YYITTMLTLAAGTAFIMWLGEQISERGIGNGISLVIFAGIVTRIPEGMRDAWSTK 190
Query: 271 FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNS 330
Q G++ G ++ L+V I++ + ++R+IPI+YA R R +S +LP K+N
Sbjct: 191 EQFGDFFGFILLLGFIFLIVSTIIFFERSQRRIPIHYAKRIVGRKMYGGQSTHLPLKLNM 250
Query: 331 SGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
+GV+P IF++S + P TLA+F ++ A L G F+ I LI FF Y+YT +
Sbjct: 251 AGVIPPIFASSIILFPATLAQFWNNDFTQQLAAFLTS-GWFHDFLYIGLIVFFCYFYTAV 309
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT- 449
+P D++E LK+ G +P +RPGKST+ F+ +LSR ++ G+V++A + P ++ +
Sbjct: 310 TFNPSDIAENLKKNGGYVPGIRPGKSTSDFIDRILSRTTLGGAVYIAGVCILPQLLTRQF 369
Query: 450 -THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ + F GTS+LI+VG A DT ++++ ++S+ Y+
Sbjct: 370 GIPVSVAQTFGGTSLLIVVGVAMDTLSQMESHLLSRSYEG 409
>gi|403050176|ref|ZP_10904660.1| preprotein translocase subunit SecY [Acinetobacter bereziniae LMG
1003]
Length = 452
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 29 RLMFLIGALVVFRLGAHIPLPGIDNVALERFFKANEGTFLGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 89 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGIGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + ++T L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 SQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 203
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V +AF + IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 204 NLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 263
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 264 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 323
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 324 LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 383
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 384 IGAIYITVICLMPMILQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|407776125|ref|ZP_11123414.1| preprotein translocase subunit SecY [Thalassospira profundimaris
WP0211]
gi|407280841|gb|EKF06408.1| preprotein translocase subunit SecY [Thalassospira profundimaris
WP0211]
Length = 448
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 246/413 (59%), Gaps = 23/413 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIP+ GV+ QN+ +L D F+GG +GR+ I +L I+P+I
Sbjct: 31 LGALIVYRLGTYIPVPGVDPSILADIFRQNAGGVLGMFDMFAGGALGRMTIFALNIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY--- 208
+A I+ QL+ ++P L+ L K+EGE GRKK+ QYTRY +V A VQA G + L
Sbjct: 91 SASIIIQLMTTVSPTLEQL-KKEGEQGRKKINQYTRYLTVLIATVQAWGIAVGLESMTGS 149
Query: 209 ----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
V D + +T+V L G+ F ++GE+I+ +GNG SL+IFT I++ LP++
Sbjct: 150 TGAAVVDPGMFFRITAVITLVGGTMFLMWLGEQITQRGIGNGISLIIFTGIVAGLPSAIA 209
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQR 320
T+ E + G L +I++ I+L + IV+V+ A+R++ I Y R +
Sbjct: 210 GTL-ELGRTGAISAL--VIVAIIVLAIAVIAFIVFVERAQRRVLIQYPKRQVGMKVMEGQ 266
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT-GI---AALKKAAVALNPGGSFYLPTN 376
S++LP K+N++GV+P IF++S L +P ++A+FT G+ A L A L G Y+
Sbjct: 267 SSHLPLKINTAGVIPPIFASSLLLMPLSVAQFTTGVDAPAWLTTATALLGRGQPLYIALY 326
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I LI FF ++YT + +P+D ++ LK+ G IP +RPGK+TA +L +L+R++V+G+ +L
Sbjct: 327 IGLIVFFAFFYTAVVFNPEDTADNLKKHGGFIPGIRPGKNTANYLDFILTRLTVIGAAYL 386
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A + P ++ + + F GTS+LI+V DT ++Q+ +++ +Y+ +
Sbjct: 387 AFVCILPELLIAEWSVPFY--FGGTSLLIVVTVTMDTVAQIQSHMLAHQYEGL 437
>gi|417845085|ref|ZP_12491118.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
gi|341955977|gb|EGT82422.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21639]
Length = 441
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLPGLVPNVGFAFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|325282660|ref|YP_004255201.1| preprotein translocase, SecY subunit [Deinococcus proteolyticus
MRP]
gi|324314469|gb|ADY25584.1| preprotein translocase, SecY subunit [Deinococcus proteolyticus
MRP]
Length = 438
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 237/424 (55%), Gaps = 19/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F + F+ P L K + L LA+ RLG IP GVN A + N N L L SGG
Sbjct: 5 FREAFQTPELLRKIIFTLLLLAVYRLGSAIPTPGVNVAA-LQNATNNDLFGLLSFISGGN 63
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + I +LG++P+I A IV QLL + P+L+ L K EGE GRK++ Q TRYA+VG
Sbjct: 64 LTQFSIFALGVLPYITASIVIQLLTKTVPQLEKLSK-EGEEGRKRINQLTRYAAVGLGAF 122
Query: 197 QAIGQVLYLRPYVNDFSTDW------VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
QA+ L++ + W VL V G A T +IGERI+D+ +GNG SL+
Sbjct: 123 QALFFSLFITSNPTFIAVGWDPGLFTVLVMVLTQIAGVALTMWIGERITDVGIGNGISLI 182
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPINYA 308
I + II P T AE F+ G + L I IL ++GIVYV +AER++PI YA
Sbjct: 183 IVSGIIGVYPGEIAAT-AELFRSGQLTLLPLLAFIGIIILTIVGIVYVYQAERRVPITYA 241
Query: 309 SRYTSRSGGLQRSA---YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK---AA 362
+G +R+ +LP KVN +GV+P+IF+++ L +P +A T A +
Sbjct: 242 RARGGAAGTGRRAGQATWLPIKVNQAGVIPVIFASAMLIIPNLIATATAERAPQVNEFIQ 301
Query: 363 VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
L G +Y+ LLI F + Y +Q DP +SEQL+ GA IP VRPG TA FL
Sbjct: 302 TYLTFGTPWYMALEALLIFGFTFLYNSVQFDPKRISEQLRESGAFIPGVRPGVPTAQFLG 361
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 482
+ +R+S+ G+ FL +L P +++ T +T F F+GT +LI+ G A +T ++++A++
Sbjct: 362 NISARLSLWGAAFLVVLTLMPQLVQSLTGITTFM-FSGTGLLIIAGVALETLKQLEAQLT 420
Query: 483 SQKY 486
++Y
Sbjct: 421 VRRY 424
>gi|342903394|ref|ZP_08725205.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|373467816|ref|ZP_09559105.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|417838901|ref|ZP_12485121.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|417842269|ref|ZP_12488363.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|417843935|ref|ZP_12490000.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|419838862|ref|ZP_14362282.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
gi|341947484|gb|EGT74133.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19501]
gi|341948398|gb|EGT75028.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21127]
gi|341955498|gb|EGT81954.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M21621]
gi|341956055|gb|EGT82495.1| Preprotein translocase subunit secY [Haemophilus haemolyticus
M19107]
gi|371757474|gb|EHO46263.1| preprotein translocase, SecY subunit [Haemophilus sp. oral taxon
851 str. F0397]
gi|386910090|gb|EIJ74752.1| preprotein translocase, SecY subunit [Haemophilus haemolyticus
HK386]
Length = 441
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLPGLVPNVGFGFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>gi|149376664|ref|ZP_01894423.1| protein translocase subunit SecY [Marinobacter algicola DG893]
gi|149359037|gb|EDM47502.1| protein translocase subunit SecY [Marinobacter algicola DG893]
Length = 440
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 248/410 (60%), Gaps = 18/410 (4%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL LL Y R+G +IP+ G+N + +QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLALLVY----RIGAHIPVPGINPDRLAALFEQNQGTILSMFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P L+ L K+EGEAGR+K+ QYTRY +V A+VQ G + L
Sbjct: 82 MPYISASIIMQLMTAVSPTLEQL-KKEGEAGRRKISQYTRYGTVILALVQGFGISVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
F+ + V +++ G+ F ++GE+I++ +GNG SLLIF I++ LP + G+
Sbjct: 141 QGVTFNDSFSFHFVAVVSFVSGAVFMMWLGEQITERGVGNGISLLIFAGIVAGLPGAIGQ 200
Query: 266 TVAEAFQDGNYIGLATIIISFILL-VLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
T+ +A ++G L + I + + V+G +V+++ +R++ INYA R R Q+S++
Sbjct: 201 TLEQA-RNGEMSLLVVLGIGILAVAVIGFVVFMERGQRRLTINYAKRQQGRRVFAQQSSH 259
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL 379
LP KVN +GV+P IF++S L P +L ++ G+ L + AL P Y+
Sbjct: 260 LPLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDISQALAPSQPLYIILFAAA 319
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ FF ++YT L +P +V++ LKR GA IP +RPG TA ++ VL+R+++ G++++A +
Sbjct: 320 VVFFCFFYTALMYNPKEVADNLKRSGAFIPGIRPGDQTAKYIDGVLTRLTLFGAMYIAAV 379
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 380 SLFPQFLMVAGNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYDSL 427
>gi|150396227|ref|YP_001326694.1| preprotein translocase subunit SecY [Sinorhizobium medicae WSM419]
gi|150027742|gb|ABR59859.1| preprotein translocase, SecY subunit [Sinorhizobium medicae WSM419]
Length = 446
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 252/437 (57%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPDAFAQAFQGQSAG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGAMQAYGIAVGLESGSGLVNDPGWFFRISTVISLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I++ LP++ T+ + G L+T +I++ I++V+ IV+V
Sbjct: 183 GIGNGISLIIFAGIVAALPSALAGTL----ELGRTGALSTPLILAIIVMVVAVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP TLA F A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANSA 298
Query: 357 ALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
+ A AL G Y+ +IAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 TMPGWATTIVGALAHGQPLYMFLYGAMIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P ++ T + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVVGAIYLIFVCILPEILISQTGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|418455628|ref|ZP_13026876.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418458504|ref|ZP_13029692.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
gi|387742523|gb|EIK29336.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387743730|gb|EIK30515.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS11b]
Length = 430
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 242/407 (59%), Gaps = 16/407 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L L + ++GIYIP GVN AF L++F GG + R I ++GIVP+I A
Sbjct: 22 LAMLVIFKIGIYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITA 81
Query: 154 QIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY---- 208
IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 82 SIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGA 140
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---F 263
+N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LPAS F
Sbjct: 141 LIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
Query: 264 GRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T +D + ++ + +++S ILL +G +YV EA RKIPI YA + T++ G Q +
Sbjct: 200 GQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-A 258
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLI 380
YLP KVNS+GV+P+IF+ + LP TL F + A A NP + + I+LI
Sbjct: 259 TYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLI 318
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA+++
Sbjct: 319 ILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIS 378
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 379 ILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 425
>gi|334143241|ref|YP_004536397.1| preprotein translocase subunit SecY [Thioalkalimicrobium cyclicum
ALM1]
gi|333964152|gb|AEG30918.1| preprotein translocase, SecY subunit [Thioalkalimicrobium cyclicum
ALM1]
Length = 442
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 248/423 (58%), Gaps = 23/423 (5%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + RLG +IP+ ++ A +Q ++L + FSGG + RL
Sbjct: 17 GDLKARLLFVLGALIVFRLGTHIPVPSIDPIALAAMFEQQRGTILDMFNMFSGGALERLS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L+ L K+EGEAGR+K+ QYTRY +V A QAIG
Sbjct: 77 ILALGIMPYISAAIIMQLLTAVSPTLEQL-KKEGEAGRRKITQYTRYGTVVLATFQAIGV 135
Query: 202 VLYLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+ L+ P V + +++T+V L G+ F ++GE+I++ +GNG SL+IF
Sbjct: 136 SIALQAQNINGMPVVVNPGPLFMVTAVITLVSGTIFLMWLGEQITERGIGNGISLIIFAG 195
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI----VYVQEAERKIPINYASR 310
I++ LP++ G T+ + + A +I +LLV G+ V+V+ +R+IP+ YA R
Sbjct: 196 IVAGLPSALGGTLEQVHTGALH---AITVIILLLLVAGVTAFVVFVERGQRRIPVQYAQR 252
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALN 366
R + +LP K+N +GV+P IF++S + P +L + G ++ LK A L
Sbjct: 253 MRGRKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPASLGGWFGSSDNMSWLKDIATTLA 312
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
PG Y+ L I FF ++YT + +P D ++ L++ GA +P +RPG TA ++ +++
Sbjct: 313 PGQPLYVILYALAIMFFCFFYTAIVFNPKDTADNLRKSGAFLPGIRPGPQTARYIDSIMG 372
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R+++ G+V++ + P + ++ + F GTS+LI+V D ++Q++++S +Y
Sbjct: 373 RLTLAGAVYITAVCLLPEFLILYWNVPFY--FGGTSLLIIVIVVMDFMTQIQSQLMSGQY 430
Query: 487 KNI 489
+++
Sbjct: 431 ESM 433
>gi|350563338|ref|ZP_08932160.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
gi|349779202|gb|EGZ33549.1| preprotein translocase, SecY subunit [Thioalkalimicrobium
aerophilum AL3]
Length = 442
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 247/423 (58%), Gaps = 23/423 (5%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + RLG +IP+ ++ A +Q ++L + FSGG + RL
Sbjct: 17 GDLKARLLFVLGALIVFRLGTHIPVPSIDPIALAAMFEQQRGTVLDMFNMFSGGALERLS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L+ L K+EGEAGR+K+ QYTRY +V A QAIG
Sbjct: 77 ILALGIMPYISAAIIMQLLTAVSPTLEQL-KKEGEAGRRKITQYTRYGTVVLATFQAIGV 135
Query: 202 VLYLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+ L+ P V + +++T+V L G+ F ++GE+I++ +GNG SL+IF
Sbjct: 136 SIALQAQNINGMPVVVNPGALFMVTAVVTLVSGTIFLMWLGEQITERGIGNGISLIIFAG 195
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI----VYVQEAERKIPINYASR 310
I++ LP++ G T+ + + A +I +LLV + V+V+ +R+IP+ YA R
Sbjct: 196 IVAGLPSALGGTLEQVHTGALH---AITVIILLLLVAAVTAFVVFVERGQRRIPVQYAQR 252
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALN 366
R + +LP K+N +GV+P IF++S + P +L + G ++ LK A L
Sbjct: 253 MRGRKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPASLGGWFGSSENMSWLKDIATTLA 312
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
PG Y+ L I FF ++YT + +P D ++ L++ GA +P +RPG TA ++ T++
Sbjct: 313 PGQPLYIMFYALAIMFFCFFYTAIVFNPKDTADNLRKSGAFLPGIRPGPQTARYIDTIMG 372
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R+++ G+V++ + P + ++ + F GT++LI+V D ++QA+++S +Y
Sbjct: 373 RLTLAGAVYITAVCLLPEFLILYWNVPFY--FGGTALLIIVIVVMDFMTQIQAQLMSGQY 430
Query: 487 KNI 489
+++
Sbjct: 431 ESM 433
>gi|261325300|ref|ZP_05964497.1| preprotein translocase subunit SecY [Brucella neotomae 5K33]
gi|261301280|gb|EEY04777.1| preprotein translocase subunit SecY [Brucella neotomae 5K33]
Length = 446
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 255/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+STA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGESTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|336315940|ref|ZP_08570845.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
gi|335879786|gb|EGM77680.1| preprotein translocase, SecY subunit [Rheinheimera sp. A13L]
Length = 442
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 251/417 (60%), Gaps = 16/417 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +L + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKTRLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQQKGTIVEMFNMFSGGALERASVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG--- 200
+LGI+P+I+A I+ QLL ++P L +L K+EGEAG++K+ QYTRY ++G AIVQAIG
Sbjct: 78 ALGIMPYISASIIVQLLTVVHPTLAEL-KKEGEAGKRKINQYTRYGTLGLAIVQAIGIST 136
Query: 201 QVLYLRP-YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+ L P V + + +T+V L G+ F ++GE+I++ +GNG SLLIFT I++
Sbjct: 137 GLPNLMPGLVVNPGIGFTITAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIVAGF 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q D +++ L I + + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGQTIEQARQGDLHFLLLLAIGAIVVAVTWFVVFFERGQRRIVVNYAKRQQGRQVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAA--LKKAAVALNPGGSFY 372
+S++LP KVN +GV+P IF++S + PGT+A + G+ A L++ A+ L+PG Y
Sbjct: 257 AQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGMVANFLQEVALTLSPGQPLY 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G
Sbjct: 317 MVLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLAG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 AAYITFICLVPEFMMVAWNVQFY--FGGTSLLIIVVVIMDFMAQVQTHLMSHQYESV 431
>gi|114704504|ref|ZP_01437412.1| preprotein translocase SecY [Fulvimarina pelagi HTCC2506]
gi|114539289|gb|EAU42409.1| preprotein translocase SecY [Fulvimarina pelagi HTCC2506]
Length = 446
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 249/438 (56%), Gaps = 24/438 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++F F K L + LG L + RLG YIP+ G+N +A Q S
Sbjct: 4 AAEQLAANLNFSAFSKAEDLKKRIWFTLGALIVYRLGTYIPMPGINPDALAQAFQQQSTG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVGRMAIFALGIMPYISASIIIQLMTSVIPSLEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVN-DFSTDWVLTSVTLLTL--GSAFTTYIGERISDL 241
YTRY +V +IVQA G L+ N + W T ++TL G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLSIVQAYGIAAGLQTQANIVVNPGWFFTMSAVITLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG------IVY 295
+GNG SL+IF I++ LP++ +A + G L+T +I I++VL IV+
Sbjct: 183 GIGNGISLIIFAGIVANLPSA----LANLLELGRTGALSTAVI-LIIIVLAVVTIATIVF 237
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI 355
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A F+
Sbjct: 238 FERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPVTVANFSNT 297
Query: 356 AALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
L A A L G Y+ LIAFF ++YT + +P D ++ LK+ G IP +
Sbjct: 298 EELPDWATAVVASLGHGQPLYMLFYAGLIAFFAFFYTAVVFNPKDTADNLKKHGGFIPGI 357
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG+ TA ++ VL+RI+V+G+++L ++ P + + + G GTS+LI+V
Sbjct: 358 RPGERTAEYIDFVLTRITVVGAIYLVVVCLLPEFLISAAGVPFYLG--GTSLLIVVSVTM 415
Query: 472 DTARKVQAEIISQKYKNI 489
DT +VQ +++ +Y+ +
Sbjct: 416 DTVAQVQGHLLAHQYEGL 433
>gi|116624182|ref|YP_826338.1| protein translocase subunit SecY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
gi|116227344|gb|ABJ86053.1| protein translocase subunit secY/sec61 alpha [Candidatus Solibacter
usitatus Ellin6076]
Length = 463
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 245/449 (54%), Gaps = 45/449 (10%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSG 134
F + F+ P L + + LG LA+ RLG +IP G+N + + N S+ D F+G
Sbjct: 8 FANIFRVPDLRKRLMFTLGLLAVYRLGGHIPTPGINIQRWEEFFSSNAGSIFGFFDLFAG 67
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G I RL + +LGI+P+I A I+ QLL + P L+ LQK EGE GR+K+ Q+TRY ++ +
Sbjct: 68 GNIKRLTVFALGIMPYITASIILQLLTVVVPTLEKLQK-EGELGRRKITQWTRYLTIILS 126
Query: 195 IVQAIG---------QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
I+Q+ G Q + + P +V ++ LT G+AF ++GE+IS+ +GN
Sbjct: 127 ILQSFGISQGLMGMQQGIVINP-----GIGFVFLTILSLTTGTAFIMWLGEQISERGVGN 181
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAF--QDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
G SL+IFT I+ LP + F D I L ++ + +V IV V+ ER+I
Sbjct: 182 GMSLIIFTGIVVGLPNAIANIYQHVFTIHDWGAITLIVLMALMVAVVAFIVLVERGERRI 241
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKK 360
P+ YA R R +S ++P KVN+ GV+P+IF++S LA P TLA+F + L K
Sbjct: 242 PVQYAKRVVGRRVMGGQSTHMPLKVNAGGVIPVIFASSILAFPQTLAQFGWVKNLPWLSK 301
Query: 361 AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF 420
+ G Y + I FF ++Y + +P++ ++ +++ G IP +RPG++TA +
Sbjct: 302 TLATIQHGEPMYYVLFVAGIIFFCFFYVSIIFNPNEAADNMRKYGGFIPGIRPGRNTADY 361
Query: 421 LKTVLSRISVLGSVFLAILAAGPAV----------------IEQTTHLTAFRG------F 458
+ +L++I+V+G ++LAIL P + I++ G F
Sbjct: 362 MNNILTKITVVGGIYLAILCLIPDIMISGIKLHHLWLVGDWIDRVAPRFILEGLGVNFYF 421
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKYK 487
GTS+LI+VG A DT +++A++I + Y+
Sbjct: 422 GGTSLLIVVGVAMDTINQIEAQLIMRHYE 450
>gi|445421863|ref|ZP_21436168.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
gi|444757133|gb|ELW81664.1| preprotein translocase, SecY subunit [Acinetobacter sp. WC-743]
Length = 440
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 244/418 (58%), Gaps = 25/418 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IPL G++ A N + L + FSGG + R+ I +LG
Sbjct: 17 RLMFLIGALVVFRLGAHIPLPGIDNVALERFFKANEGTFLGLFNMFSGGALERMSILALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTRY ++ A+VQ IG L
Sbjct: 77 IMPYISASIIVQLMSTVVPSLEAL-KKEGEQGKRKINQYTRYGTLLLALVQGIGMCAGLI 135
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + ++T L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 136 SQGITLTSGLAFYVPALTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLP---- 191
Query: 265 RTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
V +AF + IGLA + + ++ IV++++A+R+IP+NYA + R
Sbjct: 192 NLVIQAFTSVDNGQSSLIGLAVFGLLSVAVLAAIVFIEKAQRRIPVNYAQKQQGRRVFTA 251
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGS 370
+ +LP K+N +GV+P IF++S L P +L ++ G A +L+ A+ L+PG
Sbjct: 252 QQTHLPLKINMAGVIPAIFASSLLLFPASLGQWLGSADPNAGIVKRSLQDLALVLSPGQP 311
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++
Sbjct: 312 LYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTF 371
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ ++ P +++ + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 372 IGAIYITVICLMPMILQSSFGIPFHLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 427
>gi|383753535|ref|YP_005432438.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365587|dbj|BAL82415.1| putative preprotein translocase SecY subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 418
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 235/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ +K P L K L A+ R+G +IP+ GV+ A +L LD FSGG
Sbjct: 6 GNVWKIPELRQKITFTLIMFAIFRMGTHIPVPGVDPTAIEQLFANGNLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ I ++ I P+INA I+ QLL + P L+ K EG+ G KK Q TRY +V A +Q
Sbjct: 66 SKFSIFAMSITPYINAAIIIQLLNVVIPTLEQWSK-EGQEGHKKTTQVTRYLTVVLAFLQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + S +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKAAILNPSPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ Q G +Y + + I +V+ +V+V+ R+IPI+Y R +R
Sbjct: 185 ALPKNIG-TIYHYVQAGTISYFSVFMFALIAIAMVVFVVHVENGFRRIPISYTKRVGARG 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
S+++P KVN +GV+PIIF++S L P T+A+F I +K A L G
Sbjct: 244 TYGGHSSHIPLKVNQAGVIPIIFASSVLMFPVTIAQFIEIPWVKTVASYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ +I FF Y+YT + + D++E LK+ G IP +RPG+ TA +L V++RI++ GS+F
Sbjct: 304 YVGMIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGQPTADYLDHVMTRITLAGSIF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ T++ F GT++LI+VG A T ++++A I+ + Y+
Sbjct: 364 LAFIAVLPNMVAAATNIQGVY-FGGTALLIVVGVALQTMKQIEAMIVMRHYE 414
>gi|393764530|ref|ZP_10353136.1| preprotein translocase subunit SecY [Methylobacterium sp. GXF4]
gi|392730038|gb|EIZ87297.1| preprotein translocase subunit SecY [Methylobacterium sp. GXF4]
Length = 448
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 256/436 (58%), Gaps = 21/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++FG K L + LG L + RLG YIP+ G++ E F N Q +
Sbjct: 4 AAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +L I+P+I+A I+ QLL + P L+ L K+EGE+GRK + Q
Sbjct: 64 VLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVIPSLEAL-KKEGESGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
YTRY +V A+VQ+ G + L+ D ++ ++V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLALVQSWGIAIGLQSSSAAIDPGPFFLASTVITLTGGTLFLMWVGEQITSRG 182
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIII-----SFILLVLGIVYVQ 297
+GNG+SL+IF I+++LP + +A A + G L+ +II + ++LV IV+++
Sbjct: 183 IGNGSSLIIFAGIVAHLPVA----IAGALELGRTGALSPVIILGVAVAAVVLVYFIVFME 238
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--- 354
A+R++ INY R ++++LP K+N+SGV+P IF++S L LP T A F+
Sbjct: 239 RAQRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGG 298
Query: 355 -IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
L L G ++ LI FF ++YT + +P + ++ LK+ G IP +RP
Sbjct: 299 STGWLGTVTAYLGHGTPLFMALYAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRP 358
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TAAF+ VL+RI+V+G+++L ++ P ++ +++ +A GF GTS+LI+V DT
Sbjct: 359 GERTAAFIDKVLTRITVIGALYLTLVCLCPEIL--SSYASASLGFGGTSLLIVVSVTMDT 416
Query: 474 ARKVQAEIISQKYKNI 489
++ +++ +Y+ +
Sbjct: 417 VAQIHGHLMAHQYEGL 432
>gi|212704604|ref|ZP_03312732.1| hypothetical protein DESPIG_02666 [Desulfovibrio piger ATCC 29098]
gi|212672003|gb|EEB32486.1| preprotein translocase, SecY subunit [Desulfovibrio piger ATCC
29098]
Length = 437
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 240/413 (58%), Gaps = 17/413 (4%)
Query: 92 KLLGY----LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSL 145
K LG+ L R+G+++P+ GV+ A +L D FSGGG+ + + SL
Sbjct: 16 KRLGWTFLLLCCYRIGVHVPIPGVDAAALAAYFKSLSGTLFDMFDMFSGGGLSNVSVFSL 75
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G++P+I+A I+ QLL ++P ++ + K EG+AGR+K+ QYTRY +V +VQ + + L
Sbjct: 76 GVMPYISASIIMQLLQVVSPDIKRMAKEEGQAGRRKITQYTRYLTVLITLVQGLFISIGL 135
Query: 206 R--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
P V + + + ++ T GS ++GE+I++ +GNG SL+IF I+
Sbjct: 136 ESMTSPDGTPIVLNAGWHFRMVTMATFTAGSMLVMWLGEQITERGIGNGISLIIFCGIVV 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRSG 316
+P +++ I LA II+ + VL IV+V+ A+R+IPI+YA R R
Sbjct: 196 GIPRGIMQSMDLIKSGSMSIFLAVIIVLLMAAVLTAIVFVERAQRRIPISYAKRQIGRKM 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
++ +LP +VN++GV+P IF++S L P T+ +F+ ++ P G Y
Sbjct: 256 FGGQNTHLPLRVNTAGVIPPIFASSLLLFPATVGQFSTNEYVRMVTDFFAPHGVLYNVLY 315
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
++LI FF Y+YT + +DP D++E LK+ G +P +RPG+ T ++ TVLSR+++ G+V++
Sbjct: 316 VVLIFFFCYFYTAIIIDPKDMAENLKKNGGFVPGIRPGERTQEYIDTVLSRLTLSGAVYI 375
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ P ++ ++ + F GTS+LILVG A D +V++ +IS +Y+ +
Sbjct: 376 SAISLLPMLMIAKFNVPFY--FGGTSLLILVGVAMDFMNQVESHMISTQYQGL 426
>gi|150392140|ref|YP_001322189.1| preprotein translocase subunit SecY [Alkaliphilus metalliredigens
QYMF]
gi|149952002|gb|ABR50530.1| preprotein translocase, SecY subunit [Alkaliphilus metalliredigens
QYMF]
Length = 423
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 235/409 (57%), Gaps = 10/409 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L GK L + L + RLG IP+ G++ E + L S LD FSGG G + I +L
Sbjct: 14 LRGKILYTMMMLVIFRLGSVIPVPGIDIEVVRNIVGNAQLFSLLDLFSGGAFGNMTIFAL 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+I A I+ QLL P L++L K EGE GRKK+ QY RY +V A++QA G + L
Sbjct: 74 SITPYITASIIMQLLTIAIPALEELSK-EGEEGRKKIAQYQRYGTVVLALIQATGISIGL 132
Query: 206 -RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
R + ++ + LT G+AF ++GE+I++ +GNG SLLIF I+S +P S
Sbjct: 133 FRQALIQTDAFSIIVVILTLTAGTAFLMWLGEQITEKGIGNGISLLIFAGIVSRVPDSVY 192
Query: 265 RTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
RT A Q + + I + + +L++ +V + E RKIP+ YA R R +S++
Sbjct: 193 RTYVLAQQGEISIISIIAFLAIAVLVIAAVVLITEGVRKIPVQYAKRVVGRKMYGGQSSH 252
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKKAAVALNPG-GSF-YLPTNIL 378
+P KVN +GV+P+IF+ S L+ P + F +G + + G G+F Y+ +
Sbjct: 253 IPLKVNQAGVIPVIFAMSLLSFPQIVGSFFPGSGFEGFVNRFLTPSTGMGTFIYVMMQAV 312
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI FF Y+YT + +P +V+ +K+ G IP +RPGK T+ +L VL+RI++ G+ FLA
Sbjct: 313 LIIFFTYFYTAVTFNPAEVATNMKKNGGFIPGIRPGKPTSDYLNRVLTRITLAGACFLAT 372
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+A P + Q + F GT++LI+VG A +T ++V+A+++ + Y+
Sbjct: 373 IAVLPIALSQLIGMQT--AFGGTALLIVVGVALETMKQVEAQMLMRHYQ 419
>gi|304438382|ref|ZP_07398323.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368748|gb|EFM22432.1| preprotein translocase subunit SecY [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 418
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 237/419 (56%), Gaps = 20/419 (4%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIIFTLIMFAVFRMGTHIPVPGVDPTAIEQLFSQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVVLAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDGNYIGLATI---------IISFILLVLGIVYVQEAERKIPINYA 308
LP + G +A Y+ TI +I+ ++V +++++ R+IPI YA
Sbjct: 185 ALPKNIGTILA-------YVKAGTISYFSVFAFGVIALAMIVF-VIHIETGFRRIPITYA 236
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
R S+++PFKVN +GV+PIIF++S L P T+A+F I +K AA L G
Sbjct: 237 KRVVGGRTATGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFVDIPWVKTAASYLEWG 296
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI
Sbjct: 297 KPLQTTLYVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQATADYLDYVLTRI 356
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ G+ FLA +A P +I + TH+ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 357 TLAGAFFLAFIAVLPNLIAEATHIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 414
>gi|163843479|ref|YP_001627883.1| preprotein translocase subunit SecY [Brucella suis ATCC 23445]
gi|163674202|gb|ABY38313.1| preprotein translocase, SecY subunit [Brucella suis ATCC 23445]
Length = 446
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP TLA F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATLAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|325288597|ref|YP_004264778.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
gi|324963998|gb|ADY54777.1| protein translocase subunit secY/sec61 alpha [Syntrophobotulus
glycolicus DSM 8271]
Length = 430
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 239/405 (59%), Gaps = 17/405 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+G +IP+ ++R + + ++FSGG + R + SL I+P+I A I+
Sbjct: 27 LLVFRVGAHIPIPFMDRNTLQQMMGSGGIFDFFNTFSGGSLKRFSVFSLSIMPYITASII 86
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST-- 214
QLL + P L+ L K EGE GRKK++QY RYA+V +Q G LR + ST
Sbjct: 87 IQLLTVVVPYLERLSK-EGEDGRKKIMQYVRYATVVLGFIQGFGLTFGLRGALISTSTAL 145
Query: 215 --DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE-AF 271
T +LT G+AF ++GE+I++ +GNG SL+IF I++ +P + + +
Sbjct: 146 KVPLYFTVAIVLTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVAGIPDAIKHLYSLLSV 205
Query: 272 QDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
+ +++ + I++ ++++ G+V++QE +R+IP+ YA R R +S ++P KVN +
Sbjct: 206 GEVSWLAILGILLLCVIVIAGVVFIQEGQRRIPVQYAKRVVGRRVYGGQSTHIPLKVNQA 265
Query: 332 GVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFY-LPTNIL---LIAFF 383
GVMPIIF S +A P T+A + +G A ++++ GSF +P IL LI FF
Sbjct: 266 GVMPIIFGVSLMAFPSTIATWMPQTSGFAVFVHKYMSIS--GSFTSIPYMILYAGLIIFF 323
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
Y+YT + +P D+++ LK+ G +P +RPG+ T+ + +L+R+++ G VFLAI+A P
Sbjct: 324 TYFYTGITFNPVDLADNLKKNGGFVPGIRPGRPTSEYFMRILNRVTLAGGVFLAIIAVLP 383
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
A+I TT + GTS+LI+V A +T ++V+A+++ + Y+
Sbjct: 384 ALIMGTTGIPNL-ALGGTSLLIVVSVALETMKQVEAQLLQRHYQG 427
>gi|399908621|ref|ZP_10777173.1| preprotein translocase subunit SecY [Halomonas sp. KM-1]
Length = 434
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 244/412 (59%), Gaps = 18/412 (4%)
Query: 101 RLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 23 RIGAHIPVPGINPDQLAALFREQQGTILGMFNMFSGGALERMSIMALGIMPYISASIIMQ 82
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFST 214
LL ++P L+ L K+EGEAGR+K+ QYTRY +V A VQA G + L Y DFS
Sbjct: 83 LLTAVSPHLEQL-KKEGEAGRRKISQYTRYGTVLLAFVQATGMSVGLASQGIAYSADFS- 140
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+ T++ G+ F ++GE+I++ +GNG SLLIF I++ LP + G+ A +G
Sbjct: 141 -FYFTAIVTFVSGAVFLMWLGEQITEKGIGNGISLLIFAGIVAGLPGAVGQAFELARNEG 199
Query: 275 --NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
N + L + + + V +V+++ +R+I +NY R +S+YLP KVN +G
Sbjct: 200 AWNVLPLLALSVLGVATVAFVVFIERGQRRITVNYPRRQVGNKMYAGQSSYLPLKVNMAG 259
Query: 333 VMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYT 388
V+P IF++S L P ++ ++ G + L++A+ AL PG Y+ + FF ++YT
Sbjct: 260 VIPPIFASSILLFPASIGQWVGAGDGMEWLQRASQALGPGQPLYILLFGAAVIFFCFFYT 319
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L +P DV++ LK+ GA +P +RPG+ TA ++ V++R+++ G++++ ++ P +
Sbjct: 320 ALVFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLCGALYITAVSLMPQFLIV 379
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYGS 499
++ F F GT++LI+V D +VQ+ ++S +Y+++ + ++ YGS
Sbjct: 380 AWNVPFF--FGGTALLIIVVVIMDFMAQVQSHLMSHQYESVMKKSNLKGYGS 429
>gi|26987215|ref|NP_742640.1| preprotein translocase subunit SecY [Pseudomonas putida KT2440]
gi|24981853|gb|AAN66104.1|AE016238_22 Sec-dependent secretion protein SecY [Pseudomonas putida KT2440]
Length = 443
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 248/412 (60%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L FS +
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLANQGVAFSVGLGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A D N
Sbjct: 152 HIVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARTGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + ++ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMMAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YG
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYG 437
>gi|152978161|ref|YP_001343790.1| preprotein translocase subunit SecY [Actinobacillus succinogenes
130Z]
gi|150839884|gb|ABR73855.1| preprotein translocase, SecY subunit [Actinobacillus succinogenes
130Z]
Length = 441
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 250/417 (59%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLSQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRYA++G A +QAIG
Sbjct: 79 ALGIMPYISASIIIQLLATVSPTLGELRK-EGESGRRKISKYTRYATLGLATLQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS-- 315
P++ G+T+ +A Q G L ++I+ ++ + +V+V+ +R+I + YA R R
Sbjct: 198 PSAIGQTIEQARQ-GQMHPLVLLLIAAVVFAVTYFVVFVERGQRRIKVEYAKRQQGRQIL 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
GG S +LP KVN + VMP IF++S + P TL + G + L ++ L PG
Sbjct: 257 GG--HSTHLPLKVNMASVMPAIFASSIILFPATLVSWFGESSSLEWLTNLSMMLQPGQPI 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL + I FF+++Y+ +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++
Sbjct: 315 YLIVYAIAIMFFSFFYSAMQFNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G +++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 375 GGLYVVFVCLVPYIMMSAWNVQFY--FGGTSLLIVVVVIMDFIAQIQSHLMSSKYES 429
>gi|398822796|ref|ZP_10581171.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. YR681]
gi|398226502|gb|EJN12749.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. YR681]
Length = 443
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFKSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKLLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LPA+ + Q GL ++I + V+ IV+V+ A+
Sbjct: 183 GIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFVERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+V+LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|257454067|ref|ZP_05619341.1| preprotein translocase, SecY subunit [Enhydrobacter aerosaccus
SK60]
gi|257448545|gb|EEV23514.1| preprotein translocase, SecY subunit [Enhydrobacter aerosaccus
SK60]
Length = 445
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 244/421 (57%), Gaps = 31/421 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L LLG L + R G ++P+ G++ E+ ++N++L + FSGG + R+ + +LG
Sbjct: 23 RLLFLLGALVVYRFGSHVPIPGMDPESLSKFFQTNENTILGLFNMFSGGALERMSVMALG 82
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q++ + P L D K+EG+AG++++ +YTR ++ A+VQ+IG L
Sbjct: 83 IMPYISASIIVQMMTAVIPSL-DALKKEGQAGQRQINKYTRQLTLALALVQSIGMCTGL- 140
Query: 207 PYVNDFSTDWVLTS--------VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
S + LTS VT L GS F ++GE+I++ +GNG S+LI I++
Sbjct: 141 -----ISQNLTLTSGLGFYIPAVTSLVAGSMFLMWLGEQITERGIGNGISMLILAGIVAT 195
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYT-SRS 315
P +++ + Q G +A +I S + L V GIV+++ A+R+IP+NYA + + R
Sbjct: 196 FPQVVTQSI-NSVQQGQMNMIALLIFSLLALAVVAGIVFIERAQRRIPVNYAQKQSQERK 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNP 367
Q+ ++LP K+N +GV+P IF++S L P +L ++ G + L+ A+ L+P
Sbjct: 255 IYAQQQSHLPLKINMAGVIPAIFASSLLLFPASLGQWVGQSPNPNIFQSFLQNMALVLSP 314
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G YL LI FF Y+YT L P +VSE LKR GA IP +RPG T +L VL+R
Sbjct: 315 GQPLYLVIFAALIIFFCYFYTALVFSPKEVSENLKRSGAYIPGIRPGLQTQRYLDHVLNR 374
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ +G++++ I+ P +++ + G GTSVLI V D +V+A +++ +Y
Sbjct: 375 LTFIGAIYMTIICLMPMILQSAFGIPFHLG--GTSVLISVVVIMDFIAQVKAHLMTHQYH 432
Query: 488 N 488
+
Sbjct: 433 D 433
>gi|46143637|ref|ZP_00134836.2| COG0201: Preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209243|ref|YP_001054468.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165977216|ref|YP_001652809.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190151134|ref|YP_001969659.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250032|ref|ZP_07336234.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303253206|ref|ZP_07339355.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248850|ref|ZP_07530863.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307253464|ref|ZP_07535335.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307257878|ref|ZP_07539634.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262274|ref|ZP_07543923.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264483|ref|ZP_07546068.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126098035|gb|ABN74863.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165877317|gb|ABY70365.1| preprotein translocase SecY subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916265|gb|ACE62517.1| Preprotein translocase secY subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302647888|gb|EFL78095.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651095|gb|EFL81249.1| preprotein translocase subunit SecY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854777|gb|EFM86967.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306859143|gb|EFM91185.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863608|gb|EFM95535.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868037|gb|EFM99864.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870180|gb|EFN01939.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 440
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 250/418 (59%), Gaps = 16/418 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRY ++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIVQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYGTLLLAFIQSIGI 134
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L+ V + S + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ +A Q G L ++++ I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQ-GEISPLVLLLVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF 371
RS++LP KVN +GV+P IF++S + P ++ ++ G+ L + L PG
Sbjct: 254 MAPARSSHLPLKVNMAGVIPAIFASSIILFPASVTQWFGQSEGLEWLFDLSQLLQPGQPL 313
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++
Sbjct: 314 YLVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLI 373
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P +I T+ GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 GALYITFVCLVPYII--TSLWKVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSLQYDSV 429
>gi|383455050|ref|YP_005369039.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
gi|380734321|gb|AFE10323.1| preprotein translocase subunit SecY [Corallococcus coralloides DSM
2259]
Length = 448
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 246/417 (58%), Gaps = 38/417 (9%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFIN 152
L++ R+GI+I GV+R A +D L+S + FSGG + ++ I LGI+P+++
Sbjct: 26 LSVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLFSGGALEQMSIFGLGIMPYVS 85
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL------- 205
A I+ QLLA + P L+ LQK EG AGR+K+ QYTRY ++ +IVQ +G +L
Sbjct: 86 ASIIIQLLAVVVPSLERLQK-EGAAGRQKINQYTRYGTIALSIVQGVGISRWLASLGRSD 144
Query: 206 -------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS- 257
+ V + + + +V LT G+AF ++GERI++ +GNG SL+IF I++
Sbjct: 145 AGQGGFNQVVVPNDNLWFTFMTVVSLTAGTAFIMWLGERITERGIGNGISLIIFAGIVAR 204
Query: 258 YLPAS---FGRTVAEAFQDGNYIGLATIIISFILLVLGIV-YVQEAERKIPINYASRYTS 313
LP + T E +GL + F+LL++G+V YV+ R++PI YA R
Sbjct: 205 VLPGAKTLLDLTTQEIVNVAAVLGL----LFFMLLIIGVVVYVERGMRRVPIQYAKRMAG 260
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL-ARFTGIAALKKAAVALNPGGSFY 372
R ++ Y P KVN+SGV+P IF+ + L+ P TL A F + +++ G+ +
Sbjct: 261 RRMFAGQATYFPMKVNASGVIPPIFAGAVLSFPATLGAWFPFLQGFQRSI-----EGNLW 315
Query: 373 LPTN--ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
+ +LL+ FF+Y+YT L PDDV++ +K+QG IP +RPG+ TA F++ L+R++
Sbjct: 316 VYNGLFVLLVVFFSYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQTAEFIERTLNRLTF 375
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G+++LAI+ P+VI ++ L F GT++LI+VG A DT ++++ +IS+ Y+
Sbjct: 376 GGAIYLAIICVIPSVI--SSVLGVQFTFGGTALLIVVGVALDTVQQIEGHLISRNYE 430
>gi|383771155|ref|YP_005450220.1| preprotein translocase subunit SecY [Bradyrhizobium sp. S23321]
gi|381359278|dbj|BAL76108.1| preprotein translocase subunit SecY [Bradyrhizobium sp. S23321]
Length = 443
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKLLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LPA+ + Q GL ++I + V+ IV+V+ A+
Sbjct: 183 GIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFVERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|104779775|ref|YP_606273.1| preprotein translocase subunit SecY [Pseudomonas entomophila L48]
gi|148545759|ref|YP_001265861.1| preprotein translocase subunit SecY [Pseudomonas putida F1]
gi|170723886|ref|YP_001751574.1| preprotein translocase subunit SecY [Pseudomonas putida W619]
gi|395446857|ref|YP_006387110.1| preprotein translocase subunit SecY [Pseudomonas putida ND6]
gi|421524874|ref|ZP_15971495.1| preprotein translocase subunit SecY [Pseudomonas putida LS46]
gi|95108762|emb|CAK13456.1| secretion protein SecY [Pseudomonas entomophila L48]
gi|148509817|gb|ABQ76677.1| protein translocase subunit secY/sec61 alpha [Pseudomonas putida
F1]
gi|169761889|gb|ACA75205.1| preprotein translocase, SecY subunit [Pseudomonas putida W619]
gi|388560854|gb|AFK69995.1| preprotein translocase subunit SecY [Pseudomonas putida ND6]
gi|402751337|gb|EJX11850.1| preprotein translocase subunit SecY [Pseudomonas putida LS46]
Length = 443
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 248/412 (60%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L FS +
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLANQGVAFSAGLGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A D N
Sbjct: 152 HVVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARTGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + ++ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMMAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YG
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYG 437
>gi|307251078|ref|ZP_07533002.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306856908|gb|EFM89040.1| Preprotein translocase subunit secY [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 440
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 250/418 (59%), Gaps = 16/418 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRY ++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIVQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYGTLLLAFIQSIGI 134
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L+ V + S + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ +A Q G L ++++ I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQ-GEISPLVLLLVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF 371
RS++LP KVN +GV+P IF++S + P ++ ++ G+ L + L PG
Sbjct: 254 MAPARSSHLPLKVNMAGVIPAIFASSIILFPASVTQWFGQSEGLEWLFDLSQLLRPGQPL 313
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++
Sbjct: 314 YLVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLI 373
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P +I T+ GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 GALYITFVCLVPYII--TSLWKVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSLQYDSV 429
>gi|383315991|ref|YP_005376833.1| preprotein translocase subunit SecY [Frateuria aurantia DSM 6220]
gi|379043095|gb|AFC85151.1| preprotein translocase, SecY subunit [Frateuria aurantia DSM 6220]
Length = 446
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 243/417 (58%), Gaps = 23/417 (5%)
Query: 93 LLGYLALSRLGIYIPLGGVNREA---FVGNLDQ---NSLLSTLDSFSGGGIGRLGICSLG 146
L+G L + RLG YIP+ GVN +A F+ NL Q L + FSGG +GR I +LG
Sbjct: 25 LIGALIVYRLGSYIPVPGVNPDAMANFIANLGQGQGKGLADMFNMFSGGSLGRYSIFTLG 84
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
+VP+I+A IV Q++ + P L L+K +GEAG++K+ YTR+ +VG AI Q G L
Sbjct: 85 VVPYISASIVVQMMGAVIPSLAQLRK-DGEAGKRKMTMYTRFGTVGLAIFQGFGISTMLE 143
Query: 207 P--------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
V +VL SV LT G+ F ++GE+I++ +GNG S+LIF I++
Sbjct: 144 KQTLSSGVGVVYTPGLAFVLGSVVALTAGTMFLMWLGEQITERGIGNGISMLIFAGIVAG 203
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGG 317
LPA+ T+ A + + +++ IL V +V+++ A+R+I +NYA R +
Sbjct: 204 LPAAVAHTLTMASNNELSVLKLFMVVVLILAVTAFVVFMERAQRRITVNYARRSGGQRAY 263
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-----IAALKKAAVALNPGGSFY 372
+ ++++LP K+N +GV+P IF++S L P TL + G A L++ L+PG Y
Sbjct: 264 MNQTSHLPLKINMAGVIPPIFASSLLMFPATLLNWFGNSQHPSAWLQQLVQQLSPGEPLY 323
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+L+ F ++YT + + + ++ LKR GA IP +RPG+ TA ++ +V++R++ +G
Sbjct: 324 DVVFAVLVISFAFFYTAIVFNSQETADNLKRSGALIPGIRPGRGTADYIDSVMTRLTGVG 383
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++L ++ P ++ H+ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 384 ALYLVLVCLVPTFMQNMWHVPFY--FGGTSLLIVVLVVMDFIAQVQAHLVSHQYESL 438
>gi|56695420|ref|YP_165768.1| preprotein translocase subunit SecY [Ruegeria pomeroyi DSS-3]
gi|56677157|gb|AAV93823.1| preprotein translocase, SecY subunit [Ruegeria pomeroyi DSS-3]
Length = 455
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 246/420 (58%), Gaps = 25/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTR +V A VQA G +
Sbjct: 83 ALGIMPYISASIIVQLLTAMVPSLEQL-KKEGEQGRKKINQYTRLGTVALATVQAYGLAV 141
Query: 204 YLRPYVNDFSTD--WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D +T+ T++TL G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLES--GDLATEPGMYFRFATMITLVGGTMFLMWLGEQITARGIGNGVSLIIFVGIIAEV 199
Query: 260 PASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGI----VYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ +II+ IL+V+ + V+++ A RKI I Y R
Sbjct: 200 PAA----LAQFFASGRSGAISPAVIIAIILMVIAVITFVVFMERALRKIHIQYPRRQVGM 255
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGS 370
S++LP KVN +GV+P IF++S L LP T++ F+ AA + PG
Sbjct: 256 KVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSSGAANGPVMSWLLANFGPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + +I FF Y+YTF + PDDV++ LK Q +P +RPGK TA +L+ V++R+
Sbjct: 316 LYLLFFVSMIVFFAYFYTFNVSFKPDDVAQNLKNQNGFVPGIRPGKKTAEYLEYVVNRVL 375
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
VLGS +LA + P ++ ++ + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 376 VLGSAYLAAVCLLPEIMRGQFNVPFY--FGGTSVLIIVSVTMDTIQQVQSHLLAHQYEGL 433
>gi|397696219|ref|YP_006534102.1| Preprotein translocase subunit secY [Pseudomonas putida DOT-T1E]
gi|397332949|gb|AFO49308.1| Preprotein translocase subunit secY [Pseudomonas putida DOT-T1E]
Length = 429
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 248/412 (60%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 19 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 78
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L FS +
Sbjct: 79 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLANQGVAFSAGLGF 137
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A D N
Sbjct: 138 HVVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARTGDIN 197
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 198 IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 257
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + ++ PG P NILL I FF ++Y
Sbjct: 258 AIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLFSAGIIFFCFFY 313
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 314 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMMAVCLLPQFLV 373
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YG
Sbjct: 374 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYG 423
>gi|402832960|ref|ZP_10881583.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
gi|402281703|gb|EJU30329.1| preprotein translocase, SecY subunit [Selenomonas sp. CM52]
Length = 418
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 233/411 (56%), Gaps = 6/411 (1%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+ +K P L K + L A+ RLG +IP+ GV+ A +L LD FSGG
Sbjct: 7 NIYKIPELRQKVIFTLIMFAVFRLGTHIPVPGVDPSAIEQLFATGNLFGLLDLFSGGAFS 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+ I ++ I P+INA I+ QLL + P L+ K EG+ G KK + TRY +V A QA
Sbjct: 67 KFSIFAMSITPYINASIIMQLLTVVIPTLEQWSK-EGQEGHKKTTKVTRYLTVALAFFQA 125
Query: 199 IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+G + L+ + + + +L LT G+ F +IGE+I+ +GNG SL+IF I++
Sbjct: 126 VGMSIGLKQAILNPNPVSILIIAITLTGGTIFLMWIGEQITANGVGNGISLIIFAGIVAA 185
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G T+ Q G +Y + +L+++ ++Y+QE R++PI+YA R +
Sbjct: 186 LPKNLG-TIYSYLQAGTISYFNAFVFAVIALLMIVFVIYIQEGNRRVPISYAKRVVGKKT 244
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
S+++P KVN +GV+PIIF++S L P T+A+F + + A G
Sbjct: 245 YGGSSSHIPLKVNHAGVIPIIFASSVLMFPVTVAQFIEVPWVTTLAGYFAWGTPLQTSIY 304
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LLI FF Y+YT + + D++E LK+ G IP +RPGK T +L TV++RI++ G+ FL
Sbjct: 305 ALLIIFFTYFYTAVTVKISDMAENLKKYGGFIPGIRPGKPTEEYLDTVMTRITLAGAFFL 364
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A +A P ++ TH+ F GT++LI+VG A +T +++++ ++ + Y+
Sbjct: 365 AFIAVLPNLVAGATHIEGVY-FGGTALLIVVGVALNTMKQIESMVVMRHYQ 414
>gi|429768286|ref|ZP_19300450.1| preprotein translocase, SecY subunit [Brevundimonas diminuta 470-4]
gi|429189288|gb|EKY30127.1| preprotein translocase, SecY subunit [Brevundimonas diminuta 470-4]
Length = 447
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 254/432 (58%), Gaps = 22/432 (5%)
Query: 76 IDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG---NLD-QNSLLSTLD 130
++ G F K L + L LG L + R+G Y+P+ G+N EAF+ N D Q +L +
Sbjct: 1 MNMGSFAKATELHKRLLFTLGALLVYRIGTYVPIPGINGEAFLAFFQNPDGQRGILDMFN 60
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
FSGG + R+ + +L ++P+I+A I+ QL+ + P + L+K GE+GRK++ QYTRY +
Sbjct: 61 MFSGGAVERMAVFALNVMPYISASIIVQLMGAVYPPWEKLKKEGGESGRKQLNQYTRYLT 120
Query: 191 VGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
V A+ Q+ G + L ++ +++++VT+LT G+ F ++GE+++ +GNG
Sbjct: 121 VFLALAQSFGIAVGLNAQPGLIDQPGLFFIISTVTVLTGGTMFLMWLGEQVTARGVGNGI 180
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISF--ILLVLGIVYVQEAERKIPI 305
SL+IF I++ LP++ R + A Q G I+ + +++ IV+++ A+R++ I
Sbjct: 181 SLIIFAGIVAVLPSTVARMLGLA-QQGQMSAFTLFFIAIMAVAVIVFIVFMERAQRRLLI 239
Query: 306 NYASRYT-SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK---- 360
Y R +R G +RS +LP KVN++GV+P IF++S L LP T+A+FT A L +
Sbjct: 240 QYPKRQEGNRMTGGERS-FLPLKVNTAGVIPAIFASSLLMLPTTVAQFTANANLPEWMSW 298
Query: 361 ---AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L G ++ +LI FF ++YT + +P+D +E L++ G +P +RPGK T
Sbjct: 299 LPLVTAQLTHGKPVFMVLYAVLIIFFCFFYTSITFNPEDTAENLRKYGGFLPGIRPGKRT 358
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A +L VL+R++V+G+ ++ + P + + + + F GTS+LI+V DT ++
Sbjct: 359 AEYLDYVLTRLTVIGAAYITAVCLLPEFLVSSLGNSLY--FGGTSILIVVSVTMDTVAQI 416
Query: 478 QAEIISQKYKNI 489
Q+ +++ +Y+ +
Sbjct: 417 QSHLLAHQYEGL 428
>gi|167031520|ref|YP_001666751.1| preprotein translocase subunit SecY [Pseudomonas putida GB-1]
gi|325272028|ref|ZP_08138471.1| preprotein translocase subunit SecY [Pseudomonas sp. TJI-51]
gi|398843884|ref|ZP_10601001.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM84]
gi|421528320|ref|ZP_15974887.1| preprotein translocase subunit SecY [Pseudomonas putida S11]
gi|431800527|ref|YP_007227430.1| preprotein translocase subunit SecY [Pseudomonas putida HB3267]
gi|166858008|gb|ABY96415.1| preprotein translocase, SecY subunit [Pseudomonas putida GB-1]
gi|324102832|gb|EGC00236.1| preprotein translocase subunit SecY [Pseudomonas sp. TJI-51]
gi|398255116|gb|EJN40156.1| preprotein translocase, SecY subunit [Pseudomonas sp. GM84]
gi|402214277|gb|EJT85607.1| preprotein translocase subunit SecY [Pseudomonas putida S11]
gi|430791292|gb|AGA71487.1| preprotein translocase subunit SecY [Pseudomonas putida HB3267]
Length = 443
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 248/412 (60%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 33 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L FS +
Sbjct: 93 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLANQGVAFSVGLGF 151
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A D N
Sbjct: 152 HVVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARTGDIN 211
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 212 IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 271
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + ++ PG P NILL I FF ++Y
Sbjct: 272 AIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLFSAGIIFFCFFY 327
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 328 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMMAVCLLPQFLV 387
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YG
Sbjct: 388 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYG 437
>gi|27380491|ref|NP_772020.1| preprotein translocase subunit SecY [Bradyrhizobium japonicum USDA
110]
gi|27353655|dbj|BAC50645.1| preprotein translocase SECY subunit [Bradyrhizobium japonicum USDA
110]
Length = 443
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKTLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LPA+ + Q GL ++I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|254237107|ref|ZP_04930430.1| secretion protein SecY [Pseudomonas aeruginosa C3719]
gi|126169038|gb|EAZ54549.1| secretion protein SecY [Pseudomonas aeruginosa C3719]
Length = 442
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 249/424 (58%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ I+P+L+ L K+EGE+GR+K+ Q Y +V +VQ I + L
Sbjct: 82 MPYISASIIMQLMTAISPQLEQL-KKEGESGRRKISQLPHYGTVVLILVQDICMSVGLGS 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L + + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALIGVGLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A A+ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 TAGIVFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + H+ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAAHVPFYLG--GTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>gi|261222375|ref|ZP_05936656.1| preprotein translocase subunit SecY [Brucella ceti B1/94]
gi|265998340|ref|ZP_06110897.1| preprotein translocase subunit SecY [Brucella ceti M490/95/1]
gi|260920959|gb|EEX87612.1| preprotein translocase subunit SecY [Brucella ceti B1/94]
gi|262552808|gb|EEZ08798.1| preprotein translocase subunit SecY [Brucella ceti M490/95/1]
Length = 446
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVADF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|339485407|ref|YP_004699935.1| preprotein translocase subunit SecY [Pseudomonas putida S16]
gi|386010133|ref|YP_005928410.1| SecY protein [Pseudomonas putida BIRD-1]
gi|313496839|gb|ADR58205.1| SecY [Pseudomonas putida BIRD-1]
gi|338836250|gb|AEJ11055.1| preprotein translocase, SecY subunit [Pseudomonas putida S16]
Length = 429
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 248/412 (60%), Gaps = 21/412 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 19 RIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQ 78
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--W 216
L+ ++P+L+ L K+EGEAGR+K+ QYTRY +V A+VQAIG + L FS +
Sbjct: 79 LMTAVSPQLEQL-KKEGEAGRRKISQYTRYGTVILALVQAIGMSIGLANQGVAFSVGLGF 137
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGN 275
+ +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G++ A D N
Sbjct: 138 HVVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARTGDIN 197
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
L I + + ++ +V+++ +R+I ++YA R R ++++LP KVN +GV+P
Sbjct: 198 IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIP 257
Query: 336 IIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYY 387
IF++S L P +L + G+ L+ + ++ PG P NILL I FF ++Y
Sbjct: 258 AIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ----PLNILLFSAGIIFFCFFY 313
Query: 388 TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIE 447
T L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++ + P +
Sbjct: 314 TALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMMAVCLLPQFLV 373
Query: 448 QTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++ YG
Sbjct: 374 VAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLKGYG 423
>gi|297623294|ref|YP_003704728.1| preprotein translocase subunit SecY [Truepera radiovictrix DSM
17093]
gi|297164474|gb|ADI14185.1| preprotein translocase, SecY subunit [Truepera radiovictrix DSM
17093]
Length = 439
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 237/423 (56%), Gaps = 14/423 (3%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-QNSLLSTLDSFSGG 135
FG+ F+ P L K L ++G LA+ RLG++IP GV+ EA Q + L +GG
Sbjct: 5 FGNAFRIPDLRAKLLVVIGLLAVYRLGVFIPTPGVDAEALRTQFQGQGGVFELLGFVTGG 64
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
I + +LG++P+I A I+FQLL + P L+ LQK EGE GR+K+ QYTRYA+V
Sbjct: 65 NIEVFSVFALGVIPYITASIIFQLLTSVYPPLEKLQK-EGEEGRRKITQYTRYAAVALGA 123
Query: 196 VQA-------IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTS 248
+Q IG LR ++ W +T + G A Y+GE+I++ +GNG S
Sbjct: 124 IQGLFLAIALIGPSGALRVGWSNGPFLWFTVMITQIA-GIAVVIYLGEKITEYGIGNGIS 182
Query: 249 LLIFTSIISYLPASFGRTVAE-AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
L+IF I++ P + +T A + N L + I + G+V++Q+ ER+IP+ Y
Sbjct: 183 LIIFAGIVAAYPQALAQTFALIGTGESNIFSLIIFFLLLIFTIAGMVFIQQGERRIPVQY 242
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL-ARFTGIAALKKAAVALN 366
A + R +S Y+P +VN++GV+P+IF+ S L +PGTL + F + L++ N
Sbjct: 243 ARKVVGRRVMGGQSTYIPLRVNAAGVIPVIFAVSVLVIPGTLISLFPNVLWLQRVGAWFN 302
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P L + LLI F Y+YT + DP +SE L+ G IP VRPG+ T L + +
Sbjct: 303 PAQWQGLIVSTLLIVAFTYFYTQISFDPRRISENLREYGGFIPGVRPGQPTTDHLNRITT 362
Query: 427 RISVLGSVFLAILAAGPAVIEQTT-HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RI++ G++FL ++ A P ++ T T F+G +LI+VG + DT R+++++++ +
Sbjct: 363 RITLWGALFLGLVNALPQILGWLTGQGTLALVFSGIGLLIVVGVSLDTLRQLESQLMMRH 422
Query: 486 YKN 488
Y
Sbjct: 423 YDG 425
>gi|402302153|ref|ZP_10821273.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC9]
gi|400381140|gb|EJP33944.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC9]
Length = 418
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 237/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFRIPELRQKIIFTLIMFAVFRMGTHIPVPGVDPSAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G+KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGQKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++V+ R++P+ YA R
Sbjct: 185 ALPKNIG-TIYAYLKAGTISYFSVFAFAVIALAMIVFVIHVETGFRRVPVTYAKRVVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G S+++PFKVN +GV+PIIF++S L P T+A+F I +K A L G
Sbjct: 244 MGAGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDIPWVKTVASYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ TH+ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNMVAGATHIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRNYE 414
>gi|284049237|ref|YP_003399576.1| preprotein translocase subunit SecY [Acidaminococcus fermentans DSM
20731]
gi|283953458|gb|ADB48261.1| preprotein translocase, SecY subunit [Acidaminococcus fermentans
DSM 20731]
Length = 418
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 221/392 (56%), Gaps = 11/392 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G IP+ GVN +L LD FSGG + + I ++ I P+INA I+ QLL
Sbjct: 29 RAGTQIPVPGVNAAMIERLFTSGNLFGLLDLFSGGALSKFSIFAMSITPYINASIITQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND---FSTDWV 217
+ P L++ K EG G KK+ + RYA+VG +QAIG LR VN+ FS +
Sbjct: 89 TVVIPTLEEWSK-EGAEGAKKINKINRYAAVGLGAIQAIGMAYGLRAAVNNPDFFSFAMI 147
Query: 218 LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--N 275
+ + LT GS +IGE+I+ +GNG SL+IF IIS LP + Q G N
Sbjct: 148 VIT---LTAGSLLLMWIGEQITAKGIGNGISLIIFAGIISRLPNGLA-VIGRYLQAGTIN 203
Query: 276 YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMP 335
+ + +L+V+ +V + A RK+P+ YA R R + Y+P KVN +GVMP
Sbjct: 204 VFNVLIFAVLAVLMVMFVVAITVAYRKVPVQYAKRIVGRKMYGGHTTYIPLKVNQAGVMP 263
Query: 336 IIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPD 395
IIF++S L P T+A+F I ++K A L G ILLI FF Y+YT + L+
Sbjct: 264 IIFASSVLMFPVTIAQFIKIPWIQKVAGYLAWGTPLQTSLYILLILFFTYFYTAVSLNIP 323
Query: 396 DVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAF 455
D+S+ +K+ G IP +RPGK T +L V++RI++ G+VFLA +A P +I T ++
Sbjct: 324 DMSDNIKKYGGFIPGLRPGKPTTDYLDKVMNRITLAGAVFLAFIAIMPNMIVWLTGISGV 383
Query: 456 RGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT ++V++ + + Y+
Sbjct: 384 Y-FGGTALLIVVGVALDTMKQVESMTLMRHYQ 414
>gi|269203863|ref|YP_003283132.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
gi|262076153|gb|ACY12126.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ED98]
Length = 430
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 248/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y+F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYSFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|365966993|ref|YP_004948555.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745906|gb|AEW76811.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 441
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 252/417 (60%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS-- 315
PA+ G+T+ +A + G L ++I+ I+L + +V+V+ +R+I + YA R R
Sbjct: 198 PAAVGQTIEQA-RLGQMHFLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGRQIL 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
GG S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG
Sbjct: 257 GG--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPL 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++
Sbjct: 315 YLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G +++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 375 GGLYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|307244783|ref|ZP_07526884.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
gi|306491881|gb|EFM63933.1| preprotein translocase, SecY subunit [Peptostreptococcus stomatis
DSM 17678]
Length = 422
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 230/394 (58%), Gaps = 11/394 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLG IP+ G+N +++NSLL + FSGG I +LGI P+I A I+ QLL
Sbjct: 29 RLGTTIPVPGINTSVIKNMVEKNSLLGLYNMFSGGAFSNFTIFALGIGPYITASIIIQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
L++LQK GE G+KK+ +YTR ++G AI+QA+G L +R + + ++ T
Sbjct: 89 TAGFESLKELQK-SGEEGKKKINKYTRMTTLGLAIIQAVGITLGIVRSALKVNNPFFIFT 147
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYI 277
+ L S ++G+RI++ LGNG+S+LIF IIS LP G +A+ G +
Sbjct: 148 VIITLVAASMMVMWLGDRITEKGLGNGSSVLIFIGIISRLPIDIG-AIAQRVNIGLLKWP 206
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ I+ ++ + G+ ++ E+ RKIP+ YA R R S+++P KVN SGVMPII
Sbjct: 207 AITIFIVVVLITITGVTFINESTRKIPVQYAKRVVGRKMYGGESSHIPMKVNQSGVMPII 266
Query: 338 FSTSSLALPGTLARFTG--IAALKKAAVALNPGGSF--YLPTNILLIAFFNYYYTFLQLD 393
F++S LALP T+A G + A A L+ F Y I+LI F+Y+Y + +
Sbjct: 267 FASSILALPQTIALLGGSKMQAAVNAFFNLSTDKGFWTYRIIEIVLIVLFSYFYNTISFN 326
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
+D+++ +K G IP +RPGK T +L +LS+++++G+ FL ++A PA++ T ++
Sbjct: 327 TEDITKNMKNSGGFIPGIRPGKPTENYLGGILSKLTIVGAAFLGLMAMIPALM--THYMQ 384
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GTS+LI+VG A + R++++ ++ + Y+
Sbjct: 385 IPMNFGGTSLLIIVGVALELKRQLESNLVMKNYQ 418
>gi|434383102|ref|YP_006704885.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
gi|404431751|emb|CCG57797.1| preprotein translocase SecY [Brachyspira pilosicoli WesB]
Length = 446
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 240/418 (57%), Gaps = 37/418 (8%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPTALLGFLSSAQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVLYL 205
QLL + P L+ +QK EGE+GRKK+ QY RY ++G +VQ+ G ++++
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLGLCVVQSAAMASWIQSINEGAMIFM 147
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
RP ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA F
Sbjct: 148 RP-----GLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGFYD 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + +D +Y+ I++ FI+ + +VY + +R+IP+ YA R R +S
Sbjct: 203 VIQK--KDTDYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQST 260
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILL 379
++PFK+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL
Sbjct: 261 HIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLL 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q +PDD++E LK+QG IP RPG TA +LKTVLSRI++ GS+FLA +
Sbjct: 321 VIMFAYVYTSVQFNPDDIAENLKKQGGFIPGYRPGTQTAEYLKTVLSRITIGGSLFLAAI 380
Query: 440 AAGPAVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P ++ + F+G GTSV+I V A + +++++ + Y I
Sbjct: 381 AVFPDLMSKIPVFAPFKGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|239832102|ref|ZP_04680431.1| preprotein translocase, SecY subunit [Ochrobactrum intermedium LMG
3301]
gi|444310442|ref|ZP_21146064.1| preprotein translocase subunit SecY [Ochrobactrum intermedium M86]
gi|239824369|gb|EEQ95937.1| preprotein translocase, SecY subunit [Ochrobactrum intermedium LMG
3301]
gi|443486250|gb|ELT49030.1| preprotein translocase subunit SecY [Ochrobactrum intermedium M86]
Length = 446
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTSPGPFFMVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +II I+L+
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIILAIVLIAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTILNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|376280884|ref|YP_005154890.1| preprotein translocase subunit SecY [Brucella suis VBI22]
gi|358258483|gb|AEU06218.1| preprotein translocase subunit SecY [Brucella suis VBI22]
Length = 446
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVDNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|261317847|ref|ZP_05957044.1| preprotein translocase subunit SecY [Brucella pinnipedialis B2/94]
gi|265988876|ref|ZP_06101433.1| preprotein translocase subunit SecY [Brucella pinnipedialis
M292/94/1]
gi|340790831|ref|YP_004756296.1| preprotein translocase subunit SecY [Brucella pinnipedialis B2/94]
gi|261297070|gb|EEY00567.1| preprotein translocase subunit SecY [Brucella pinnipedialis B2/94]
gi|264661073|gb|EEZ31334.1| preprotein translocase subunit SecY [Brucella pinnipedialis
M292/94/1]
gi|340559290|gb|AEK54528.1| preprotein translocase, subunit SecY [Brucella pinnipedialis B2/94]
Length = 446
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGHPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|300870627|ref|YP_003785498.1| preprotein translocase SecY [Brachyspira pilosicoli 95/1000]
gi|404475025|ref|YP_006706456.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|431808545|ref|YP_007235443.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
gi|300688326|gb|ADK30997.1| preprotein translocase, SecY [Brachyspira pilosicoli 95/1000]
gi|404436514|gb|AFR69708.1| preprotein translocase SecY [Brachyspira pilosicoli B2904]
gi|430781904|gb|AGA67188.1| preprotein translocase SecY [Brachyspira pilosicoli P43/6/78]
Length = 446
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 240/418 (57%), Gaps = 37/418 (8%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPTALLGFLSSAQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVLYL 205
QLL + P L+ +QK EGE+GRKK+ QY RY ++G +VQ+ G ++++
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLGLCVVQSAAMASWIQSINEGAMIFM 147
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
RP ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA F
Sbjct: 148 RP-----GLGFILLVVITATTGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGFYD 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + +D +Y+ I++ FI+ + +VY + +R+IP+ YA R R +S
Sbjct: 203 VIQK--KDTDYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQST 260
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILL 379
++PFK+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL
Sbjct: 261 HIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLL 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q +PDD++E LK+QG IP RPG TA +LKTVLSRI++ GS+FLA +
Sbjct: 321 VIMFAYVYTSVQFNPDDIAENLKKQGGFIPGYRPGTQTAEYLKTVLSRITIGGSLFLAAI 380
Query: 440 AAGPAVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P ++ + F+G GTSV+I V A + +++++ + Y I
Sbjct: 381 AVFPDLMSKIPVFAPFKGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|289548522|ref|YP_003473510.1| preprotein translocase subunit SecY [Thermocrinis albus DSM 14484]
gi|289182139|gb|ADC89383.1| preprotein translocase, SecY subunit [Thermocrinis albus DSM 14484]
Length = 431
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 235/404 (58%), Gaps = 15/404 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ RLG +IPL GV+ A Q ++ D FSGG + R+ + +LG++P+I+A
Sbjct: 25 LAIYRLGSHIPLPGVDTSALEEFFKSFQGTIFYLYDIFSGGNLARMTLFALGVMPYISAS 84
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ QLL P+LQ L K EG+ GR K+ QYTRY ++ A VQ++G L+L+
Sbjct: 85 IMMQLLTVSIPELQRLAKEEGDYGRYKINQYTRYLTILVAFVQSMGVALWLQGQASPKGT 144
Query: 207 PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
P V + +V+T+V L + F ++G+RI++ +GNG S+LIF I++ P + R
Sbjct: 145 PIVPEGGPLFVVTTVVTLVASTMFLVWVGDRITEKGIGNGMSILIFAGIVAGFPNAVIR- 203
Query: 267 VAEAFQDGNYIGLATI--IISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ + G+ + II I +V+ V++QEAER+IPI Y R R + S YL
Sbjct: 204 MYQMLSSGDITPFKVLGAIIFVIGVVVFTVFIQEAERRIPIQYPRRQVGRQEVVGGSTYL 263
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P K+N +GV+PIIF+ S L +P T+ F + A NP Y +L I FF
Sbjct: 264 PIKINPAGVIPIIFAQSLLIIPSTVLGFIKHPIAQALHDAFNPASFLYNFLYVLFIIFFT 323
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + ++P +V++ L+R GA +P +RPG+ T L+ +++R++ +GS+FL+++A P
Sbjct: 324 YFYTAVLINPAEVADNLRRAGAFVPGIRPGQDTQRLLEGIINRLAFVGSIFLSVVATVPV 383
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+ + + F GT+ LI+VG A DT K++A ++ +KY +
Sbjct: 384 FVSIWLKVPFY--FGGTTALIVVGVALDTINKIEASLLQRKYTH 425
>gi|339504835|ref|YP_004692255.1| preprotein translocase subunit SecY [Roseobacter litoralis Och 149]
gi|338758828|gb|AEI95292.1| preprotein translocase subunit SecY [Roseobacter litoralis Och 149]
Length = 454
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 240/418 (57%), Gaps = 22/418 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + PKL+ L K+EGE GRKK+ QYTRY +V A +QA G +
Sbjct: 83 ALGIMPYISASIIVQLMTAMVPKLEAL-KKEGEQGRKKINQYTRYGTVFLATLQAYGLAV 141
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D TD + + V L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLE--AGDIVTDPGMFFRASCVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 199
Query: 260 PASFGRTVAE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
PA+ + A A IG +I+ IL ++ +V+++ A RKI I Y R
Sbjct: 200 PAAMAQFFASGRSGAISPAVIIG---VILMVILTIMFVVFMERALRKIHIQYPRRQVGMK 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSFY 372
S++LP KVN +GV+P IF++S L LP T++ F+G + + PG Y
Sbjct: 257 VYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNPIMSWLLANFGPGQPLY 316
Query: 373 LPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
L +I FF Y+YTF + PDDV++ LK Q IP +RPGK T+ +L+ V++R+ VL
Sbjct: 317 LAFFTTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKKTSEYLEYVVNRVLVL 376
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS +LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 377 GSAYLAAVCLLPEILRGEFAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 432
>gi|255319795|ref|ZP_05361000.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SK82]
gi|262380328|ref|ZP_06073482.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SH164]
gi|421466428|ref|ZP_15915107.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
WC-A-157]
gi|421855340|ref|ZP_16287720.1| preprotein translocase subunit SecY [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255303114|gb|EET82326.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SK82]
gi|262297774|gb|EEY85689.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
SH164]
gi|400203208|gb|EJO34201.1| preprotein translocase, SecY subunit [Acinetobacter radioresistens
WC-A-157]
gi|403189351|dbj|GAB73921.1| preprotein translocase subunit SecY [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 452
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 247/417 (59%), Gaps = 23/417 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ + L+G L + RLG +IP+ G+N A + N +Q ++L + FSGG + R+ I +LG
Sbjct: 29 RMMFLIGALLVFRLGAHIPVPGINNAALENLFNANQGTILGLFNMFSGGALERMSILALG 88
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL++ + P L+ L K+EGE G++K+ QYTR ++ A+VQA G L
Sbjct: 89 IMPYISASIIVQLMSTVIPSLEAL-KKEGEQGKRKINQYTRQGTLLLALVQATGMCAGLI 147
Query: 207 PYVNDFSTD--WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
++ + + +VT L G+ F ++GE+I++ +GNG S++IF I++ LP
Sbjct: 148 GQGITLTSGLAFYVPAVTSLVAGTMFLMWLGEQITERGVGNGISMIIFAGIVAGLPNLIM 207
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQR 320
++++ D L ++I F LL LG IV++++A+R+I +NYA + R +
Sbjct: 208 QSLSSV--DSGQTSLIGLVI-FGLLSLGVLAAIVFIEKAQRRISVNYAQKQQGRRVFTAQ 264
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---------ALKKAAVALNPGGSF 371
+LP K+N +GV+P IF++S L P +L ++ G A L+ A+ L+PG
Sbjct: 265 QTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSADPNAGMIKRGLQDLALVLSPGQPL 324
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL LI FF Y+YT L P +VSE LKR GA +P +RPG+ TA +L +L+R++ +
Sbjct: 325 YLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAYVPGIRPGEQTARYLDHILNRLTFI 384
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G++++ ++ P V++ + + + G GTS+LI+V D ++QA + S +Y N
Sbjct: 385 GAMYITVICLMPMVLQSSFGIPFYLG--GTSLLIVVVVVMDFMAQLQAHLTSHQYDN 439
>gi|17987060|ref|NP_539694.1| preprotein translocase subunit SecY [Brucella melitensis bv. 1 str.
16M]
gi|23502090|ref|NP_698217.1| preprotein translocase subunit SecY [Brucella suis 1330]
gi|161619169|ref|YP_001593056.1| preprotein translocase subunit SecY [Brucella canis ATCC 23365]
gi|225852710|ref|YP_002732943.1| preprotein translocase subunit SecY [Brucella melitensis ATCC
23457]
gi|256263800|ref|ZP_05466332.1| C-5 cytosine-specific DNA methylase [Brucella melitensis bv. 2 str.
63/9]
gi|256369637|ref|YP_003107147.1| preprotein translocase subunit SecY [Brucella microti CCM 4915]
gi|260565535|ref|ZP_05836019.1| C-5 cytosine-specific DNA methylase [Brucella melitensis bv. 1 str.
16M]
gi|260566258|ref|ZP_05836728.1| C-5 cytosine-specific DNA methylase [Brucella suis bv. 4 str. 40]
gi|261219561|ref|ZP_05933842.1| preprotein translocase subunit SecY [Brucella ceti M13/05/1]
gi|261314065|ref|ZP_05953262.1| preprotein translocase subunit SecY [Brucella pinnipedialis
M163/99/10]
gi|261322056|ref|ZP_05961253.1| preprotein translocase subunit SecY [Brucella ceti M644/93/1]
gi|261755181|ref|ZP_05998890.1| preprotein translocase subunit SecY [Brucella suis bv. 3 str. 686]
gi|261758405|ref|ZP_06002114.1| C-5 cytosine-specific DNA methylase [Brucella sp. F5/99]
gi|265984271|ref|ZP_06097006.1| preprotein translocase subunit SecY [Brucella sp. 83/13]
gi|265991290|ref|ZP_06103847.1| preprotein translocase subunit SecY [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995127|ref|ZP_06107684.1| preprotein translocase subunit SecY [Brucella melitensis bv. 3 str.
Ether]
gi|294852549|ref|ZP_06793222.1| preprotein translocase [Brucella sp. NVSL 07-0026]
gi|306838023|ref|ZP_07470881.1| preprotein translocase, SecY subunit [Brucella sp. NF 2653]
gi|306840321|ref|ZP_07473093.1| preprotein translocase, SecY subunit [Brucella sp. BO2]
gi|306844117|ref|ZP_07476711.1| preprotein translocase, SecY subunit [Brucella inopinata BO1]
gi|376276175|ref|YP_005116614.1| preprotein translocase subunit SecY [Brucella canis HSK A52141]
gi|384211580|ref|YP_005600662.1| preprotein translocase subunit SecY [Brucella melitensis M5-90]
gi|384224878|ref|YP_005616042.1| preprotein translocase subunit SecY [Brucella suis 1330]
gi|384408688|ref|YP_005597309.1| preprotein translocase subunit SecY [Brucella melitensis M28]
gi|384445268|ref|YP_005603987.1| preprotein translocase subunit SecY [Brucella melitensis NI]
gi|17982717|gb|AAL51958.1| protein translocase subunit secy [Brucella melitensis bv. 1 str.
16M]
gi|23348049|gb|AAN30132.1| preprotein translocase, SecY subunit [Brucella suis 1330]
gi|161335980|gb|ABX62285.1| Hypothetical protein BCAN_A1236 [Brucella canis ATCC 23365]
gi|225641075|gb|ACO00989.1| preprotein translocase, SecY subunit [Brucella melitensis ATCC
23457]
gi|255999799|gb|ACU48198.1| preprotein translocase SecY [Brucella microti CCM 4915]
gi|260151603|gb|EEW86697.1| C-5 cytosine-specific DNA methylase [Brucella melitensis bv. 1 str.
16M]
gi|260155776|gb|EEW90856.1| C-5 cytosine-specific DNA methylase [Brucella suis bv. 4 str. 40]
gi|260924650|gb|EEX91218.1| preprotein translocase subunit SecY [Brucella ceti M13/05/1]
gi|261294746|gb|EEX98242.1| preprotein translocase subunit SecY [Brucella ceti M644/93/1]
gi|261303091|gb|EEY06588.1| preprotein translocase subunit SecY [Brucella pinnipedialis
M163/99/10]
gi|261738389|gb|EEY26385.1| C-5 cytosine-specific DNA methylase [Brucella sp. F5/99]
gi|261744934|gb|EEY32860.1| preprotein translocase subunit SecY [Brucella suis bv. 3 str. 686]
gi|262766240|gb|EEZ12029.1| preprotein translocase subunit SecY [Brucella melitensis bv. 3 str.
Ether]
gi|263002074|gb|EEZ14649.1| preprotein translocase subunit SecY [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093928|gb|EEZ17862.1| C-5 cytosine-specific DNA methylase [Brucella melitensis bv. 2 str.
63/9]
gi|264662863|gb|EEZ33124.1| preprotein translocase subunit SecY [Brucella sp. 83/13]
gi|294821138|gb|EFG38137.1| preprotein translocase [Brucella sp. NVSL 07-0026]
gi|306275560|gb|EFM57292.1| preprotein translocase, SecY subunit [Brucella inopinata BO1]
gi|306289720|gb|EFM60909.1| preprotein translocase, SecY subunit [Brucella sp. BO2]
gi|306406947|gb|EFM63168.1| preprotein translocase, SecY subunit [Brucella sp. NF 2653]
gi|326409235|gb|ADZ66300.1| preprotein translocase subunit SecY [Brucella melitensis M28]
gi|326538943|gb|ADZ87158.1| preprotein translocase, SecY subunit [Brucella melitensis M5-90]
gi|343383058|gb|AEM18550.1| preprotein translocase subunit SecY [Brucella suis 1330]
gi|349743259|gb|AEQ08802.1| preprotein translocase subunit SecY [Brucella melitensis NI]
gi|363404742|gb|AEW15037.1| preprotein translocase, SecY subunit [Brucella canis HSK A52141]
Length = 446
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|407788335|ref|ZP_11135467.1| preprotein translocase subunit SecY [Celeribacter baekdonensis B30]
gi|407197616|gb|EKE67670.1| preprotein translocase subunit SecY [Celeribacter baekdonensis B30]
Length = 452
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 253/439 (57%), Gaps = 26/439 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NS 124
AA +++D+G K L + LG L + RLG YIP+ G++ A +DQ +
Sbjct: 4 AAEQMAANLDWGTLGKAKELRQRIFFTLGLLIVYRLGTYIPVPGIDGGALKNFMDQAASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+ L F+GG +GR+GI +LGI+P+I+A I+ QL+ + P L++L K+EGEAGRKK+ Q
Sbjct: 64 IGGILSMFTGGALGRMGIFALGIMPYISASIIVQLMTSMVPSLENL-KKEGEAGRKKINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTSVTLLTL--GSAFTTYIGERISD 240
YTR+ +V A+ QA G L D + D W + ++TL G+ F ++GE+I+
Sbjct: 123 YTRFGTVALALFQAYGLAASLE--AGDLAHDPGWYFRAGVVITLVGGTMFLMWLGEQITQ 180
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGI----VY 295
+GNG SL+IF I++ +P R +A+ F+ G ++ +I+ I +++G+ V+
Sbjct: 181 RGIGNGISLIIFVGIVAEIP----RALAQFFESGRTGAVSPAVILIVIAMIVGVIAFVVF 236
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG- 354
++ A RK+ I Y R +S++LP KVN +GV+P IF++S L LP T+A F+G
Sbjct: 237 MERALRKVHIQYPRRQQGMKIYDAQSSHLPIKVNPAGVIPAIFASSLLLLPTTVATFSGQ 296
Query: 355 --IAALKKAAVA-LNPGGSFYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPL 410
+ + +A PG YL L+I FF Y+YT + +DV++ LK Q IP
Sbjct: 297 GDVGPVMSTILAYFGPGQPLYLLFFTLMIVFFAYFYTANVAFKTEDVAKNLKNQNGFIPG 356
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+RPGK T L +++RI V+GS +LA + P ++ + + F GTSVLI+V
Sbjct: 357 IRPGKKTEEHLDYIVARILVIGSAYLAAVCLLPEILRSQFAIPFY--FGGTSVLIVVSVT 414
Query: 471 TDTARKVQAEIISQKYKNI 489
DT +++Q+ +++ +Y+ +
Sbjct: 415 MDTIQQIQSHLLAHQYEGL 433
>gi|313895264|ref|ZP_07828821.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
137 str. F0430]
gi|320529816|ref|ZP_08030893.1| preprotein translocase, SecY subunit [Selenomonas artemidis F0399]
gi|312976159|gb|EFR41617.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
137 str. F0430]
gi|320137834|gb|EFW29739.1| preprotein translocase, SecY subunit [Selenomonas artemidis F0399]
Length = 418
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 237/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFRIPELRQKIIFTLIMFAVFRMGTHIPVPGVDPSAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G+KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGQKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++++ R++P+ YA R
Sbjct: 185 ALPKNIG-TIYAYLKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPVTYAKRVVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G S+++PFKVN +GV+PIIF++S L P T+A+F I +K A L G
Sbjct: 244 MGAGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDIPWVKTVASYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ TH+ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNMVAGATHIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRNYE 414
>gi|322515614|ref|ZP_08068593.1| preprotein translocase subunit SecY [Actinobacillus ureae ATCC
25976]
gi|322118324|gb|EFX90599.1| preprotein translocase subunit SecY [Actinobacillus ureae ATCC
25976]
Length = 440
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 251/418 (60%), Gaps = 16/418 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 TFALGIMPYISASIIVQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L+ V + S + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMLQGLVPNPSILFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ +A Q G L ++++ I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPATIGQTIEQARQ-GEISPLVLLLVAVIAFAVTYFVVFVERGQRRIVVNYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF 371
RS++LP KVN +GV+P IF++S + P +++++ G+ L + L PG
Sbjct: 254 MAPARSSHLPLKVNMAGVIPAIFASSIILFPASISQWFGQSEGLEWLFDLSQLLQPGQPL 313
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++
Sbjct: 314 YIVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLI 373
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P +I T+ GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 GALYITFVCLVPYII--TSLWKVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSLQYDSV 429
>gi|422743282|ref|ZP_16797274.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
gi|320143502|gb|EFW35283.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 430
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 241/407 (59%), Gaps = 16/407 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L L + ++G YIP GVN AF L++F GG + R I ++GIVP+I A
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITA 81
Query: 154 QIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY---- 208
IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 82 SIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGA 140
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---F 263
+N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LPAS F
Sbjct: 141 LIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
Query: 264 GRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T +D + ++ + +++S ILL +G +YV EA RKIPI YA + T++ G Q +
Sbjct: 200 GQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-A 258
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLI 380
YLP KVNS+GV+P+IF+ + LP TL F + A A NP + + I+LI
Sbjct: 259 TYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLI 318
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA+++
Sbjct: 319 ILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIS 378
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 379 ILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 425
>gi|384862874|ref|YP_005745594.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|302752103|gb|ADL66280.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 425
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 241/407 (59%), Gaps = 16/407 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L L + ++G YIP GVN AF L++F GG + R I ++GIVP+I A
Sbjct: 17 LAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITA 76
Query: 154 QIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY---- 208
IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 77 SIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGA 135
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---F 263
+N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LPAS F
Sbjct: 136 LIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 194
Query: 264 GRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T +D + ++ + +++S ILL +G +YV EA RKIPI YA + T++ G Q +
Sbjct: 195 GQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-A 253
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLI 380
YLP KVNS+GV+P+IF+ + LP TL F + A A NP + + I+LI
Sbjct: 254 TYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLI 313
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA+++
Sbjct: 314 ILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIS 373
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 374 ILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 420
>gi|261752522|ref|ZP_05996231.1| preprotein translocase subunit SecY [Brucella suis bv. 5 str. 513]
gi|261742275|gb|EEY30201.1| preprotein translocase subunit SecY [Brucella suis bv. 5 str. 513]
Length = 446
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 254/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGALELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|431932128|ref|YP_007245174.1| preprotein translocase subunit SecY [Thioflavicoccus mobilis 8321]
gi|431830431|gb|AGA91544.1| preprotein translocase, SecY subunit [Thioflavicoccus mobilis 8321]
Length = 450
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 242/412 (58%), Gaps = 19/412 (4%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPF 150
++G L + R+ ++P+ GVN EA DQ+ S+L + FSGG + R I +LGI+P+
Sbjct: 28 VIGALLVYRIATFVPVPGVNPEALAALFDQHQGSMLDLFNMFSGGALQRASIVALGIMPY 87
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR---- 206
I+A I+ Q++A + PKL+ L K+EGE+GR+K+ YTRY ++ A QAIG + L+
Sbjct: 88 ISASIIMQMMAAVIPKLEQL-KKEGESGRRKITSYTRYGTLVLATFQAIGISVALQGQAV 146
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
V +V T+ L G+ F ++GE+IS+ +GNG SL+IF+ I++ LP++
Sbjct: 147 GGSAIVTQSGFGFVFTAAVSLVTGTMFLMWLGEQISERGIGNGISLIIFSGIVAGLPSAA 206
Query: 264 GRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGGLQRS 321
G T+ E + G L + + + L + +V+V+ +R+I +NYA R R +S
Sbjct: 207 GGTL-ELVRTGEMNALTVLAMFALALAVTAFVVFVERGQRRITVNYARRQQGRKLMAAQS 265
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNI 377
+LP K+N +GV+P IF++S + PGTL ++ G + L A L+PG Y+
Sbjct: 266 THLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSSEDMRWLADFAAKLSPGEPIYVLLYA 325
Query: 378 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
I FF ++YT L +P D ++ LKR GA IP +RPG+ TA ++ +V++R++V G++++
Sbjct: 326 SAIIFFCFFYTALIFNPKDTADNLKRSGAFIPGIRPGEQTARYIDSVMTRLTVGGAIYIT 385
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P + ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 386 GVCLLPEFLILGWNVPFY--FGGTSLLIVVVVTMDFMAQVQAHLVSHQYEGL 435
>gi|407771075|ref|ZP_11118438.1| preprotein translocase subunit SecY [Thalassospira xiamenensis M-5
= DSM 17429]
gi|407285964|gb|EKF11457.1| preprotein translocase subunit SecY [Thalassospira xiamenensis M-5
= DSM 17429]
Length = 448
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 253/438 (57%), Gaps = 20/438 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA +++++ F K L + LG L + RLG YIP+ GV+ QN+
Sbjct: 4 AAEQLAANLNWSSFSKATELKKRIWFTLGALIVYRLGTYIPIPGVDPSILADIFQQNAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L D F+GG +GR+ I +L I+P+I+A I+ QL+ ++P L+ + K+EGE GRKK+ Q
Sbjct: 64 VLGMFDMFAGGALGRMTIFALNIMPYISASIIIQLMTTVSPSLEAM-KKEGEQGRKKINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPY-------VNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A +QA G + L V+D + T+V L G+ F ++GE+
Sbjct: 123 YTRYLTVVIATIQAWGIAVGLESMSGSSGSAVHDPGMFFRFTAVVTLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVY 295
I+ +GNG SL+IF I++ LPA+ T+ E + G + + + II+ I ++ IV+
Sbjct: 183 ITQRGIGNGISLIIFAGIVAGLPAAIAGTL-ELGRTGAISALVIVAIIVLAIAVIAFIVF 241
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG- 354
++ A+R++ I Y R +S++LP K+N++GV+P IF++S L +P ++A+FT
Sbjct: 242 MERAQRRVLIQYPKRQVGMKVMEGQSSHLPLKINTAGVIPPIFASSLLLMPLSVAQFTAG 301
Query: 355 ---IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
A L L G Y+ I LI FF ++YT + +P+D ++ LK+ G IP +
Sbjct: 302 ADAPAWLSTVTALLGRGQPLYIGLYIALIVFFAFFYTAVVFNPEDTADNLKKHGGFIPGI 361
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPGK+TA +L +L+R++V+G+ +LA + P ++ + + F GTS+LI+V
Sbjct: 362 RPGKNTANYLDFILTRLTVIGAAYLAFVCILPELLIAEWSVPFY--FGGTSLLIVVTVTM 419
Query: 472 DTARKVQAEIISQKYKNI 489
DT ++Q+ +++ +Y+ +
Sbjct: 420 DTVAQIQSHMLAHQYEGL 437
>gi|374988965|ref|YP_004964460.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
gi|297159617|gb|ADI09329.1| preprotein translocase subunit SecY [Streptomyces bingchenggensis
BCW-1]
Length = 437
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 245/433 (56%), Gaps = 27/433 (6%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + L RLG +IP+ G+N + +DQ L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVLFRLGQHIPIPGINYQNVQTCIDQAKGQQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G+ K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGQAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLR------------PYVNDFSTDWVLTSVTL---LTLGSAFTTYIGER 237
AI+Q G V R V D D + T+V + +T G+A ++GE
Sbjct: 124 LAILQGTGLVATARSGQLFQACDVGNQIVKD---DAIFTTVVMVITMTAGTALIMWLGEL 180
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQ 297
++D +GNG S+L+F SI + P++ + G ++ +++ +++V +V+V+
Sbjct: 181 VTDRGIGNGMSILMFVSIAAGFPSAMWTIKQQGKIMGGWLEFGLVVLCGLVMVGLVVFVE 240
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
+A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+G A
Sbjct: 241 QAQRRIPVQYAKRMIGRRSYGGTSTYIPMKVNQAGVIPVIFASSLLYIPALIVQFSGSKA 300
Query: 358 LKKAAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
+ N +Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G
Sbjct: 301 GWATWIETNFVRGDHPYYITTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAG 360
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA +L VL+RI+ GS++L ++A P V T F GTS+LI+VG +T
Sbjct: 361 RPTAEYLSYVLNRITWPGSLYLGLIALVPTVALVTLKANQNFPFGGTSILIIVGVGLETV 420
Query: 475 RKVQAEIISQKYK 487
+++++++ + Y+
Sbjct: 421 KQIESQLQQRHYE 433
>gi|28198373|ref|NP_778687.1| preprotein translocase subunit SecY [Xylella fastidiosa Temecula1]
gi|182681014|ref|YP_001829174.1| preprotein translocase subunit SecY [Xylella fastidiosa M23]
gi|386084536|ref|YP_006000818.1| preprotein translocase subunit SecY [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558926|ref|ZP_12209885.1| Preprotein translocase subunit SecY SecY [Xylella fastidiosa
EB92.1]
gi|28056443|gb|AAO28336.1| preprotein translocase SecY subunit [Xylella fastidiosa Temecula1]
gi|182631124|gb|ACB91900.1| preprotein translocase, SecY subunit [Xylella fastidiosa M23]
gi|307579483|gb|ADN63452.1| preprotein translocase subunit SecY [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178508|gb|EGO81494.1| Preprotein translocase subunit SecY SecY [Xylella fastidiosa
EB92.1]
Length = 457
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 255/439 (58%), Gaps = 26/439 (5%)
Query: 77 DFGDFFKG--PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSF 132
+FG+ F L + L LLG L + R+G Y+P+ GVN EA + + + ++ + F
Sbjct: 8 NFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMF 67
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + R I +L ++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V
Sbjct: 68 SGGALHRFSIFALNVMPYISASIVVQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVI 126
Query: 193 FAIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
A++Q L L+ V +V+T++ LT G+ F ++GE++++ +G
Sbjct: 127 LAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVMTAIVALTAGTVFLMWVGEQVTERGIG 186
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERK 302
NG S++IF I++ LP S +T+ +AF+ ++ +II FI+L +V+V+ R+
Sbjct: 187 NGVSMIIFAGIVAGLPGSVLQTI-DAFRSDALSLISLLIIVFIVLSFTFFVVFVERGLRR 245
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----- 357
I +NYA R R+ + +S++LP K+N +GV+P IF++S LA P TL+ ++G A+
Sbjct: 246 ITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTLF 305
Query: 358 ---LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
L++ + AL PG ++ +LI F ++YT L + ++ LK+ GA IP +RPG
Sbjct: 306 GAWLQRVSSALGPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPG 365
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
K+T+ ++ VL+R++ +GS++L I+ P ++ + + A F GTS+LI V D
Sbjct: 366 KATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQ--SRMGASFHFGGTSLLIAVVVVMDFI 423
Query: 475 RKVQAEIISQKYKNIEFYD 493
++Q S +Y + F++
Sbjct: 424 SQIQVHQASNQYDGVSFFN 442
>gi|410617413|ref|ZP_11328381.1| preprotein translocase subunit SecY [Glaciecola polaris LMG 21857]
gi|410162976|dbj|GAC32519.1| preprotein translocase subunit SecY [Glaciecola polaris LMG 21857]
Length = 439
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 244/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ DQ +++ + FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLADLFDQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 77 ALGIMPYITASIIIQLLTVMHPPMMEL-KKEGEAGRRKISQYTRYFTLVLATFQAIGIAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I+S L
Sbjct: 136 NLPNLISGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVSGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L I + I + +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGDLNLLFLLLIGVIIIAITYFVVFVERGQRRIVVNYAKRQQGRKVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G + L++ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESFSWLQEVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 FYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYVDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVPFY--FGGTSLLIMVVVIMDFMAQVQTHLMSHQYESV 428
>gi|261867274|ref|YP_003255196.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415771218|ref|ZP_11485253.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416108417|ref|ZP_11591050.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346847|ref|ZP_21154806.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412606|gb|ACX81977.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348004337|gb|EGY44851.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348656386|gb|EGY74005.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443541209|gb|ELT51669.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 441
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 251/417 (60%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS-- 315
PA+ G+T+ +A + G L ++I+ I+L + +V+V+ R+I + YA R R
Sbjct: 198 PAAVGQTIEQA-RLGQMHFLVLLLIAVIVLAVTYFVVFVERGHRRIKVEYAKRQQGRQIL 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
GG S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG
Sbjct: 257 GG--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPL 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++
Sbjct: 315 YLVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G +++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 375 GGLYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|390952400|ref|YP_006416159.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
gi|390428969|gb|AFL76034.1| protein translocase subunit secY/sec61 alpha [Thiocystis violascens
DSM 198]
Length = 450
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 236/404 (58%), Gaps = 19/404 (4%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G ++P+ GVN EA DQN S+L + FSGG + R + +LG++P+I+A I+ Q
Sbjct: 36 RIGTFVPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERASLFALGVMPYISASIIIQ 95
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------PYVND 211
L+ + P+L+ L K+EGE+GR+K+ QYTRY +V A QAIG + L+ V
Sbjct: 96 LMTSVVPQLEQL-KKEGESGRRKITQYTRYGTVFLATFQAIGISMALQGQTAGGSALVVH 154
Query: 212 FSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF 271
+V T+ L G+ F ++GE+I++ +GNG S++IF I++ LPA+ G T+ E
Sbjct: 155 GGIGFVFTAAVSLVTGTMFLMWLGEQITERGIGNGISMIIFAGIVAGLPAALGGTL-ELA 213
Query: 272 QDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVN 329
+ G LA + + + L + +V+V+ +R+I +NYA R R +S +LP K+N
Sbjct: 214 RTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNYARRQQGRKMMQAQSTHLPLKLN 273
Query: 330 SSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLPTNILLIAFFNY 385
+GV+P IF++S L PGTL +F G + + L PG Y+ + I FF +
Sbjct: 274 MAGVIPPIFASSILLFPGTLGQFFGANENLRWIANITSKLAPGEPLYVVFYTVAIVFFCF 333
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+YT L +P + ++ LKR GA IP +RPG+ TA ++ +V++R++ G++++ + P
Sbjct: 334 FYTALVFNPKETADNLKRSGAFIPGIRPGEQTARYIDSVMTRLTAAGAIYITTVCLLPEF 393
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 394 LIVGYNVPFY--FGGTSLLIVVVVVMDFMAQVQAHLMSHQYEGL 435
>gi|416893397|ref|ZP_11924585.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
gi|347813951|gb|EGY30603.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
ATCC 33389]
Length = 441
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 251/417 (60%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKRRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLATVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS-- 315
PA+ G+T+ +A + G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 198 PAAIGQTIEQA-RLGQMHVLVLLLIAVIVFAVTYFVVFVERGQRRIKVEYAKRQQGRQIL 256
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
GG S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG
Sbjct: 257 GG--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLLHPGQPL 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++
Sbjct: 315 YLVVYAAAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
G +++ + P V+ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 375 GGLYVTFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|109897334|ref|YP_660589.1| preprotein translocase subunit SecY [Pseudoalteromonas atlantica
T6c]
gi|410624853|ref|ZP_11335642.1| preprotein translocase subunit SecY [Glaciecola mesophila KMM 241]
gi|109699615|gb|ABG39535.1| protein translocase subunit secY/sec61 alpha [Pseudoalteromonas
atlantica T6c]
gi|410155380|dbj|GAC22411.1| preprotein translocase subunit SecY [Glaciecola mesophila KMM 241]
Length = 439
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 244/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ DQ +++ + FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLAELFDQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 77 ALGIMPYITASIIIQLLTVMHPPMMEL-KKEGEAGRRKISQYTRYFTLVLATFQAIGIAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I+S L
Sbjct: 136 NLPNLISGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVSGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L I + I + +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGDLNLLFLLLIGVIIIAITYFVVFVERGQRRIVVNYAKRQQGRKVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G + L++ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESFSWLQEVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 FYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYVDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVPFY--FGGTSLLIMVVVIMDFMAQVQTHLMSHQYESV 428
>gi|169830456|ref|YP_001716438.1| preprotein translocase subunit SecY [Candidatus Desulforudis
audaxviator MP104C]
gi|169637300|gb|ACA58806.1| preprotein translocase, SecY subunit [Candidatus Desulforudis
audaxviator MP104C]
Length = 424
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 236/408 (57%), Gaps = 12/408 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L L + R+G ++P GV EA + L D SGG + ++
Sbjct: 16 LRNKLLFTLAMLLIFRIGAHVPTPGVRPEAMAELIASGVLFGFFDVISGGAFKNFSVFAM 75
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
GI+P+INA I+ QLL + PKL+ L K EGE GRKK+ QY RY + A +QAIG + +
Sbjct: 76 GIIPYINASIIMQLLTVVIPKLERLAK-EGEEGRKKIQQYIRYGTAVLAFLQAIGMSVAI 134
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ + + L +LT G+ F ++GE+I++ +GNG SLLIF I+S +P R
Sbjct: 135 KGALISPTVVNYLFVALILTAGTVFLMWLGEQITEKGIGNGISLLIFAGIVSRVPEGVTR 194
Query: 266 TVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
V E Q G N + + ++I L++ +V + E +R+IP+ YA R R ++ +
Sbjct: 195 VV-EYLQVGTINILSVLALLIIGTLVIAAVVAMHEGQRRIPVQYAKRVIGRRVYGGQTTH 253
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALN--PGGSFYLPT-NILL 379
LP KVN +GV+P+IF++S L P + + F+G A AA LN GSF+ T LL
Sbjct: 254 LPLKVNQAGVIPVIFASSMLIFPEQMLQWFSGNAV---AAWFLNFFHWGSFFHTTLYALL 310
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+YT + ++P D+++ +K+ G IP +RPG+ TA ++ V+SRI++ G++FLA++
Sbjct: 311 IIGFTYFYTAIIMNPVDMADNIKKHGGFIPGIRPGRPTAEYISKVMSRITLAGAIFLALI 370
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + T + F GT++LI+VG A +T ++V+A ++ + Y+
Sbjct: 371 AILPNFVLLATQIPNVY-FGGTALLIVVGVALETMKQVEAHLLMRSYQ 417
>gi|311029069|ref|ZP_07707159.1| preprotein translocase subunit SecY [Bacillus sp. m3-13]
Length = 431
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 250/430 (58%), Gaps = 27/430 (6%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F +F + G + K + L L + R+G +IP+ GVN + D+ S+ L++F GG
Sbjct: 5 FSNFMRVGDIRKKIVFTLLMLVIFRIGTFIPVPGVNSDILKFQ-DELSVFGILNTFGGGA 63
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ I ++G++P+I A I+ QLL + PK + K +GEAGR+K+ Q+TRY ++
Sbjct: 64 LQNFSILAMGVMPYITASIIVQLLQMDVVPKFTEWSK-QGEAGRRKLAQFTRYFTIVLGF 122
Query: 196 VQAIGQVLYLRPYVN-------DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTS 248
+QAIG + N F+T ++ V LT G+AF ++GE+I+ +GNG S
Sbjct: 123 IQAIGMSIGFNTMANGQLIMNPTFTTYLLIALV--LTAGTAFLMWLGEQITAHGVGNGIS 180
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERK 302
+LIF I+S +P + A QD N + +A I+++ + +++G++++Q+A RK
Sbjct: 181 ILIFAGIVSAIPTGANQIYASLIQDAGDQLFLNLVIVALIVLAILAVIVGVIFIQQALRK 240
Query: 303 IPINYASRYTSRS-GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
IPI YA + R+ G + +LP KVN++GV+P+IF+ S + P T+A F A+ +
Sbjct: 241 IPIQYAKKMAGRAPTGGGHTTHLPLKVNAAGVIPVIFAVSFIITPPTIASFFNENAVTRW 300
Query: 362 AVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
++ NP G + + LI F Y+YTF+Q +P+ ++E LK+QG IP +RPG +T
Sbjct: 301 IISSFDYTNPIG---MVVYVALIIAFTYFYTFVQSNPEQMAENLKKQGGYIPGIRPGMNT 357
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
+L ++ R++ +G++FLA ++ P + L A GTS+LI+VG A +T +++
Sbjct: 358 QEYLTKIIYRLTFVGALFLAAISILPIIFMSFAGLPAAVQIGGTSLLIVVGVALETMKQL 417
Query: 478 QAEIISQKYK 487
+++++ + YK
Sbjct: 418 ESQLVKRHYK 427
>gi|407783127|ref|ZP_11130332.1| preprotein translocase secY subunit [Oceanibaculum indicum P24]
gi|407203598|gb|EKE73584.1| preprotein translocase secY subunit [Oceanibaculum indicum P24]
Length = 447
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 250/442 (56%), Gaps = 29/442 (6%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S I+FG F K L + LG L + RLG YIP+ G++ QNS
Sbjct: 4 AAEQLASQINFGAFSKATELKKRIWFTLGALIVYRLGTYIPIPGIDPVILAEIFRQNSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L D F+GG +GR+ I +L I+P+I+A I+ QL+ ++P L+ L K+EGE+GRKK+ Q
Sbjct: 64 ILGMFDMFAGGALGRMTIFALNIMPYISASIILQLMTAVSPTLEAL-KKEGESGRKKINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPY-------VNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A QA G V+ L V D + +T+V L G+ F ++GE+
Sbjct: 123 YTRYLTVVLATAQAFGIVVGLEGMSGSAGSAVVDPGWFFRVTAVITLVGGTIFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASF------GRTVAEAFQDGNYIGLATI-IISFILLV 290
I+ +GNG SL+IF I++ LPA+ GRT A + + L + +I+F+
Sbjct: 183 ITARGIGNGISLIIFAGIVANLPAALVNTLELGRTGALSAGLIILLLLGAVAVIAFV--- 239
Query: 291 LGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLA 350
+++ A+R++ + Y R +++LP K+N+SGV+P IF++S L LP TLA
Sbjct: 240 ---CFMERAQRRLLVQYPKRQVGAKMYGGDTSHLPLKLNTSGVIPPIFASSLLLLPITLA 296
Query: 351 RFT---GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
FT G A + L G Y+ I LI FF ++YT + +P D +E L++ G
Sbjct: 297 NFTAGQGPAWMSTVTSLLGHGQPLYMALYIFLIVFFAFFYTAIVFNPADTAENLRKHGGF 356
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +RPGK+TA +L VL+R++V+G+ +LAI+ P ++ + + F GTS+LI+V
Sbjct: 357 IPGIRPGKNTADYLDYVLTRLTVVGAAYLAIVCILPELLISQYAVPFY--FGGTSLLIVV 414
Query: 468 GCATDTARKVQAEIISQKYKNI 489
DT ++Q+ +++ +Y+ +
Sbjct: 415 TVTMDTVGQIQSHLLAHQYEGL 436
>gi|386388972|ref|ZP_10073814.1| preprotein translocase, SecY subunit [Haemophilus
paraphrohaemolyticus HK411]
gi|387772237|ref|ZP_10128194.1| preprotein translocase, SecY subunit [Haemophilus parahaemolyticus
HK385]
gi|385696706|gb|EIG27177.1| preprotein translocase, SecY subunit [Haemophilus
paraphrohaemolyticus HK411]
gi|386907681|gb|EIJ72387.1| preprotein translocase, SecY subunit [Haemophilus parahaemolyticus
HK385]
Length = 441
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 249/418 (59%), Gaps = 15/418 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L ++ + + +T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMLSGLVPNPNMLFYITAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LPA+ G+T+ EA Q + +++ L I I + +V+V+ +R+I +NYASR R
Sbjct: 195 GLPATIGQTIEEARQGEISFLVLLLIAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMM 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-----TGIAALKKAAVALNPGGSF 371
RS++LP KVN +GV+P IF++S + P ++ ++ G L + L PG
Sbjct: 255 APARSSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSSEGFEWLFDLSQLLQPGQPL 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++
Sbjct: 315 YIVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDRVMTRLTLI 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P +I + G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 375 GALYITFVCLVPYIITSLWKVPFQLG--GTSLLIVVVVIMDFIAQVQSHMMSLQYDSV 430
>gi|15925220|ref|NP_372754.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927810|ref|NP_375343.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus N315]
gi|21283878|ref|NP_646966.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MW2]
gi|49484446|ref|YP_041670.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49487012|ref|YP_044233.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57650814|ref|YP_187029.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus COL]
gi|82751819|ref|YP_417560.1| preprotein translocase subunit SecY [Staphylococcus aureus RF122]
gi|87162195|ref|YP_494819.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196142|ref|YP_500959.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268670|ref|YP_001247613.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH9]
gi|150394735|ref|YP_001317410.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus JH1]
gi|151222344|ref|YP_001333166.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980545|ref|YP_001442804.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu3]
gi|161510434|ref|YP_001576093.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221140168|ref|ZP_03564661.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316991|ref|ZP_04840204.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253729896|ref|ZP_04864061.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253734361|ref|ZP_04868526.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|255007010|ref|ZP_05145611.2| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257423715|ref|ZP_05600144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257429032|ref|ZP_05605419.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257434639|ref|ZP_05610690.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257794576|ref|ZP_05643555.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|258408822|ref|ZP_05681106.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|258422421|ref|ZP_05685333.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|258439810|ref|ZP_05690556.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|258442634|ref|ZP_05691194.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|258446667|ref|ZP_05694822.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|258450215|ref|ZP_05698307.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|258450774|ref|ZP_05698833.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|258455413|ref|ZP_05703373.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|262052022|ref|ZP_06024233.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282893668|ref|ZP_06301900.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|282902133|ref|ZP_06310026.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282906573|ref|ZP_06314421.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909543|ref|ZP_06317354.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282915079|ref|ZP_06322856.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282917575|ref|ZP_06325327.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282920805|ref|ZP_06328523.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282922099|ref|ZP_06329795.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282925710|ref|ZP_06333358.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282926776|ref|ZP_06334403.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|283767322|ref|ZP_06340237.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283959008|ref|ZP_06376449.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284025256|ref|ZP_06379654.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 132]
gi|293497483|ref|ZP_06665337.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511058|ref|ZP_06669755.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|293549664|ref|ZP_06672336.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|294848763|ref|ZP_06789508.1| preprotein translocase [Staphylococcus aureus A9754]
gi|295404906|ref|ZP_06814719.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295428813|ref|ZP_06821437.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275979|ref|ZP_06858486.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MR1]
gi|297209957|ref|ZP_06926353.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297243964|ref|ZP_06927854.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297589701|ref|ZP_06948342.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|300910969|ref|ZP_07128419.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|304379414|ref|ZP_07362149.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379015354|ref|YP_005291590.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|379021895|ref|YP_005298557.1| pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|384548437|ref|YP_005737690.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|384551016|ref|YP_005740268.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|384865412|ref|YP_005750771.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384866854|ref|YP_005747050.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870778|ref|YP_005753492.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|385782465|ref|YP_005758636.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729936|ref|YP_006196319.1| SecY protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831802|ref|YP_006238456.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387603514|ref|YP_005735035.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|387781193|ref|YP_005755991.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus LGA251]
gi|404479524|ref|YP_006710954.1| preprotein translocase subunit SecY [Staphylococcus aureus
08BA02176]
gi|415684480|ref|ZP_11449589.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|415686925|ref|ZP_11450929.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|415692917|ref|ZP_11454808.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|417647898|ref|ZP_12297729.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|417652782|ref|ZP_12302520.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|417654898|ref|ZP_12304614.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|417795991|ref|ZP_12443208.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|417800510|ref|ZP_12447629.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|417801851|ref|ZP_12448933.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|417888259|ref|ZP_12532373.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|417893308|ref|ZP_12537343.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|417895465|ref|ZP_12539451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|417898973|ref|ZP_12542885.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|417900885|ref|ZP_12544763.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|417903498|ref|ZP_12547342.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|418279661|ref|ZP_12892872.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|418287145|ref|ZP_12899777.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|418310911|ref|ZP_12922442.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|418314280|ref|ZP_12925758.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|418315650|ref|ZP_12927107.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|418319146|ref|ZP_12930532.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|418320123|ref|ZP_12931486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|418428285|ref|ZP_13001272.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|418431170|ref|ZP_13004069.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418435077|ref|ZP_13006926.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437844|ref|ZP_13009619.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|418440776|ref|ZP_13012460.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|418443746|ref|ZP_13015331.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446745|ref|ZP_13018205.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|418449834|ref|ZP_13021203.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|418452668|ref|ZP_13023989.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|418563490|ref|ZP_13127926.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|418564126|ref|ZP_13128551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|418568396|ref|ZP_13132742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|418572025|ref|ZP_13136240.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|418573055|ref|ZP_13137255.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|418577431|ref|ZP_13141529.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418580191|ref|ZP_13144277.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595653|ref|ZP_13159251.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|418599459|ref|ZP_13162942.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|418601325|ref|ZP_13164761.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|418639989|ref|ZP_13202227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642210|ref|ZP_13204405.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|418645251|ref|ZP_13207378.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648083|ref|ZP_13210133.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|418653597|ref|ZP_13215535.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657457|ref|ZP_13219224.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660062|ref|ZP_13221706.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|418663023|ref|ZP_13224551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|418872402|ref|ZP_13426742.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|418876085|ref|ZP_13430333.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418876437|ref|ZP_13430679.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881918|ref|ZP_13436128.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418882192|ref|ZP_13436396.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418884841|ref|ZP_13438997.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418890030|ref|ZP_13444156.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418893009|ref|ZP_13447114.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418898818|ref|ZP_13452882.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418901797|ref|ZP_13455841.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418904594|ref|ZP_13458623.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418907201|ref|ZP_13461219.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|418910060|ref|ZP_13464048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|418912812|ref|ZP_13466786.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418915357|ref|ZP_13469322.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418918296|ref|ZP_13472245.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418921098|ref|ZP_13475022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418923956|ref|ZP_13477862.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418926797|ref|ZP_13480687.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418932534|ref|ZP_13486360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946772|ref|ZP_13499181.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951262|ref|ZP_13503374.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|418980681|ref|ZP_13528455.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|418983179|ref|ZP_13530881.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984007|ref|ZP_13531702.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418989261|ref|ZP_13536928.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418989436|ref|ZP_13537100.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419774907|ref|ZP_14300860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|419786221|ref|ZP_14311958.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|422746534|ref|ZP_16800466.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424774950|ref|ZP_18201951.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|424786213|ref|ZP_18213004.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|440706674|ref|ZP_20887398.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|440735588|ref|ZP_20915191.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443635909|ref|ZP_21120028.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|443640553|ref|ZP_21124541.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|448742562|ref|ZP_21724502.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|448745026|ref|ZP_21726901.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
gi|81693972|sp|Q5HDX8.1|SECY_STAAC RecName: Full=Protein translocase subunit SecY
gi|83291316|sp|Q99S39.1|SECY_STAAM RecName: Full=Protein translocase subunit SecY
gi|83291322|sp|Q7A468.1|SECY_STAAN RecName: Full=Protein translocase subunit SecY
gi|83291332|sp|Q6GEK3.1|SECY_STAAR RecName: Full=Protein translocase subunit SecY
gi|83291339|sp|Q6G791.1|SECY_STAAS RecName: Full=Protein translocase subunit SecY
gi|83291348|sp|Q7A086.1|SECY_STAAW RecName: Full=Protein translocase subunit SecY
gi|110282999|sp|O08387.2|SECY_STAA8 RecName: Full=Protein translocase subunit SecY
gi|13702030|dbj|BAB43322.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus N315]
gi|14248003|dbj|BAB58392.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205320|dbj|BAB96014.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MW2]
gi|49242575|emb|CAG41296.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245455|emb|CAG43932.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285000|gb|AAW37094.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus COL]
gi|82657350|emb|CAI81791.1| preprotein translocase subunit [Staphylococcus aureus RF122]
gi|87128169|gb|ABD22683.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203700|gb|ABD31510.1| preprotein translocase, SecY subunit, putative [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|147741739|gb|ABQ50037.1| protein translocase subunit secY/sec61 alpha [Staphylococcus aureus
subsp. aureus JH9]
gi|149947187|gb|ABR53123.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus JH1]
gi|150375144|dbj|BAF68404.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722680|dbj|BAF79097.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Mu3]
gi|160369243|gb|ABX30214.1| Sec family Type I general secretory pathway preprotein translocase
SecY [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726343|gb|EES95072.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253727678|gb|EES96407.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH130]
gi|257272733|gb|EEV04835.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257279513|gb|EEV10100.1| translocase subunit SecY [Staphylococcus aureus subsp. aureus
68-397]
gi|257285235|gb|EEV15351.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M876]
gi|257788548|gb|EEV26888.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9781]
gi|257840505|gb|EEV64965.1| preprotein translocase subunit SecY [Staphylococcus aureus A9763]
gi|257841852|gb|EEV66289.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9719]
gi|257847586|gb|EEV71588.1| translocase subunit secY [Staphylococcus aureus A9299]
gi|257851755|gb|EEV75689.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A8115]
gi|257854735|gb|EEV77683.1| preprotein translocase subunit secY [Staphylococcus aureus A6300]
gi|257856307|gb|EEV79216.1| preprotein translocase, SecY subunit [Staphylococcus aureus A6224]
gi|257861557|gb|EEV84359.1| preprotein translocase, SecY subunit [Staphylococcus aureus A5948]
gi|257862624|gb|EEV85392.1| translocase subunit secY/sec61 alpha [Staphylococcus aureus A5937]
gi|259160077|gb|EEW45110.1| preprotein translocase SecY [Staphylococcus aureus 930918-3]
gi|282312539|gb|EFB42943.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C101]
gi|282315220|gb|EFB45604.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C427]
gi|282318537|gb|EFB48895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus D139]
gi|282320800|gb|EFB51134.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M899]
gi|282326522|gb|EFB56824.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329472|gb|EFB58993.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282591227|gb|EFB96300.1| preprotein translocase, SecY subunit [Staphylococcus aureus A10102]
gi|282593567|gb|EFB98560.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9765]
gi|282596592|gb|EFC01551.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus C160]
gi|282763726|gb|EFC03854.1| preprotein translocase, SecY subunit [Staphylococcus aureus A8117]
gi|283461201|gb|EFC08285.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus H19]
gi|283471452|emb|CAQ50663.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus ST398]
gi|283788600|gb|EFC27427.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290918711|gb|EFD95787.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M1015]
gi|291096414|gb|EFE26672.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466045|gb|EFF08574.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus M809]
gi|294824142|gb|EFG40566.1| preprotein translocase [Staphylococcus aureus A9754]
gi|294969851|gb|EFG45869.1| preprotein translocase [Staphylococcus aureus A8819]
gi|295127162|gb|EFG56804.1| preprotein translocase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885630|gb|EFH24567.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178742|gb|EFH37987.1| preprotein translocase [Staphylococcus aureus A8796]
gi|297578212|gb|EFH96925.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MN8]
gi|298695486|gb|ADI98708.1| preprotein translocase subunit [Staphylococcus aureus subsp. aureus
ED133]
gi|300887949|gb|EFK83144.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH70]
gi|302333866|gb|ADL24059.1| Sec family Type I general secretory pathway preprotein translocase
SecY_1 [Staphylococcus aureus subsp. aureus JKD6159]
gi|304341946|gb|EFM07850.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312437359|gb|ADQ76430.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TCH60]
gi|312830579|emb|CBX35421.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129690|gb|EFT85681.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193482|gb|EFU23878.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS00]
gi|315198240|gb|EFU28571.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140232|gb|EFW32091.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus MRSA131]
gi|329314913|gb|AEB89326.1| Preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus T0131]
gi|329723493|gb|EGG60022.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21172]
gi|329730338|gb|EGG66728.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21193]
gi|329732075|gb|EGG68430.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21189]
gi|334270404|gb|EGL88809.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21305]
gi|334271056|gb|EGL89451.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21310]
gi|334276112|gb|EGL94380.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21318]
gi|341841593|gb|EGS83046.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21235]
gi|341846654|gb|EGS87845.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21266]
gi|341846902|gb|EGS88090.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21259]
gi|341849912|gb|EGS91048.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21269]
gi|341855504|gb|EGS96349.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21201]
gi|341856092|gb|EGS96935.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21195]
gi|344178295|emb|CCC88781.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus LGA251]
gi|359831204|gb|AEV79182.1| Pre protein translocase secY subunit [Staphylococcus aureus subsp.
aureus M013]
gi|364523454|gb|AEW66204.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164569|gb|EHM56483.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21209]
gi|365170314|gb|EHM61339.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21178]
gi|365227827|gb|EHM69014.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus VCU006]
gi|365233906|gb|EHM74848.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21334]
gi|365235701|gb|EHM76612.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21331]
gi|365241399|gb|EHM82145.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21232]
gi|365243090|gb|EHM83781.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21340]
gi|371970728|gb|EHO88144.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21262]
gi|371977226|gb|EHO94504.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21264]
gi|371977724|gb|EHO94984.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21283]
gi|371979625|gb|EHO96851.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21272]
gi|371983142|gb|EHP00289.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21333]
gi|374364051|gb|AEZ38156.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus VC40]
gi|374396775|gb|EHQ68000.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21343]
gi|374398791|gb|EHQ69945.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21345]
gi|374400754|gb|EHQ71860.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21342]
gi|375015607|gb|EHS09254.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-3]
gi|375017258|gb|EHS10879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-24]
gi|375018785|gb|EHS12355.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023605|gb|EHS17055.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-55]
gi|375027348|gb|EHS20712.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-88]
gi|375030621|gb|EHS23931.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-105]
gi|375033165|gb|EHS26370.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-111]
gi|375035016|gb|EHS28155.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-122]
gi|375367244|gb|EHS71211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373664|gb|EHS77326.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-160]
gi|375377422|gb|EHS80890.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-157]
gi|377698754|gb|EHT23101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377699313|gb|EHT23659.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377700856|gb|EHT25189.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377702057|gb|EHT26382.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377707603|gb|EHT31895.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377709606|gb|EHT33858.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377713383|gb|EHT37591.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377715548|gb|EHT39737.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377718101|gb|EHT42273.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377725887|gb|EHT49999.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377727874|gb|EHT51976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG547]
gi|377728783|gb|EHT52879.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377729542|gb|EHT53634.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377737201|gb|EHT61211.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377739221|gb|EHT63227.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377740507|gb|EHT64503.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745150|gb|EHT69126.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377748223|gb|EHT72184.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377753184|gb|EHT77101.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377758855|gb|EHT82736.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377760031|gb|EHT83910.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG149]
gi|377766134|gb|EHT89967.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377767813|gb|EHT91599.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377768582|gb|EHT92360.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377772708|gb|EHT96454.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379991540|gb|EIA13011.1| SecY [Staphylococcus aureus subsp. aureus DR10]
gi|383360867|gb|EID38253.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-M]
gi|383971306|gb|EID87385.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CO-23]
gi|384231229|gb|AFH70476.1| SecY [Staphylococcus aureus subsp. aureus 71193]
gi|385197194|emb|CCG16840.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387715918|gb|EIK03984.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS2]
gi|387716410|gb|EIK04468.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387723620|gb|EIK11353.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS4]
gi|387725016|gb|EIK12646.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS5]
gi|387728108|gb|EIK15607.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS6]
gi|387733057|gb|EIK20254.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS8]
gi|387734050|gb|EIK21206.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS7]
gi|387734377|gb|EIK21530.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS9]
gi|387741948|gb|EIK28772.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS10]
gi|402347052|gb|EJU82119.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CM05]
gi|404441013|gb|AFR74206.1| preprotein translocase SecY subunit [Staphylococcus aureus
08BA02176]
gi|408424154|emb|CCJ11565.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408426143|emb|CCJ13530.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408428131|emb|CCJ15494.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408430120|emb|CCJ27285.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408432107|emb|CCJ19422.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408434101|emb|CCJ21386.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408436094|emb|CCJ23354.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|408438077|emb|CCJ25320.1| Protein translocase subunit SecY [Staphylococcus aureus subsp.
aureus ST228]
gi|421955482|gb|EKU07820.1| Preprotein translocase secY subunit [Staphylococcus aureus CN79]
gi|436430468|gb|ELP27830.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506825|gb|ELP42584.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21282]
gi|443405074|gb|ELS63686.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21196]
gi|443408725|gb|ELS67242.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21236]
gi|445546721|gb|ELY15007.1| preprotein translocase subunit SecY [Staphylococcus aureus
KT/314250]
gi|445561642|gb|ELY17834.1| preprotein translocase subunit SecY [Staphylococcus aureus KT/Y21]
Length = 430
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|154149113|ref|YP_001405716.1| preprotein translocase subunit SecY [Campylobacter hominis ATCC
BAA-381]
gi|153805122|gb|ABS52129.1| preprotein translocase, SecY subunit [Campylobacter hominis ATCC
BAA-381]
Length = 421
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 236/417 (56%), Gaps = 24/417 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
K L LG+L RL Y+P+ GVN + D N+ L + FSG RL + SLG
Sbjct: 8 KILITLGFLFAYRLLAYVPVPGVNVDVIKEFFDSNAGNALGMFNMFSGKAAERLSVISLG 67
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I A I+ +LLA P L L+K G +K +Q RY ++G +VQAIG + L+
Sbjct: 68 IMPYITASIIMELLAATFPNLGKLKKERD--GMQKYMQIIRYTTIGITVVQAIGVSIGLQ 125
Query: 207 ---------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ + + +++ S + +G+ +IGE+I+ +G G SL+IF I+S
Sbjct: 126 GLTGRTGASAIMTENTNEFIFISCISMLVGTMLLMWIGEQITQRGIGQGISLIIFAGIVS 185
Query: 258 YLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P++ G TV + N+I LA +I+ ++ + I+YV+ AER++PI+Y+ + ++
Sbjct: 186 GIPSAIGGTVNLLNTSEMNFIVLAFVILIILVTIGVIIYVEMAERRVPISYSRKIIMQNQ 245
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
+ Y+P K+N SGV+P IF+++ L PGT+ + + ++K L+P G F+
Sbjct: 246 NKRIMNYIPIKINLSGVIPPIFASAILMFPGTILQTSTNPFIQKINDFLSPQGYFFNFIQ 305
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LL+ FF Y+Y + + D+SE LK+QG IP VRPG+ T+ FL V SR++ GS++L
Sbjct: 306 FLLVVFFAYFYASIAFNSKDISENLKKQGGFIPGVRPGEHTSTFLNDVASRLTFWGSIYL 365
Query: 437 AILAAGPAVIEQTTHLTAFRG----FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ P + LT F G F GTSVLI+V A DT R+++A+I KYK +
Sbjct: 366 GMVTVVPWL------LTKFLGVPFYFGGTSVLIVVSVALDTMRRIEAQIYMNKYKTL 416
>gi|387151353|ref|YP_005742917.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
gi|285817892|gb|ADC38379.1| Preprotein translocase secY subunit [Staphylococcus aureus
04-02981]
Length = 430
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTQKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|378825687|ref|YP_005188419.1| protein SecY [Sinorhizobium fredii HH103]
gi|365178739|emb|CCE95594.1| secY [Sinorhizobium fredii HH103]
Length = 446
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 250/437 (57%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG YIPL G+N AF +
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTYIPLPGLNPAAFAQAFQGQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPALEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGAMQAYGIAVGLESGSGLVNDPGWFFRISTVISLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I++ LP + T+ + G L+T +I++ I++V+ IV+V
Sbjct: 183 GIGNGISLIIFAGIVAALPGALAGTL----ELGRTGALSTPLILAIIVMVVAVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP TLA F A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANAA 298
Query: 357 ALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A AL G Y+ +IAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 TLPGWATTIVGALAHGQPLYMIFYGGMIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P ++ T + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVIGAIYLIFVCILPEILISQTGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|392958525|ref|ZP_10324034.1| preprotein translocase subunit SecY [Bacillus macauensis ZFHKF-1]
gi|391875426|gb|EIT84037.1| preprotein translocase subunit SecY [Bacillus macauensis ZFHKF-1]
Length = 433
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 242/420 (57%), Gaps = 22/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICS 144
L K L L L + R+G +IP+ GVNR+ + N S+ L++F GG + I +
Sbjct: 14 LRNKILFTLLMLIVFRIGTFIPVPGVNRDVLEFSSGNNASIFGFLNTFGGGALKNFSIFA 73
Query: 145 LGIVPFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+GI+P+I A I+ QLL + PK + K +GE GRKK+ Q+TRY ++ +QA+G +
Sbjct: 74 MGIMPYITASIIVQLLQMDVVPKFTEWSK-QGEVGRKKLAQFTRYGTIVLGFIQAVGMSI 132
Query: 204 ---YLRP-YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L P ++D S L T+LT G+AF ++GE+I+ +GNG S++IF I++ +
Sbjct: 133 GFNKLFPGLISDPSWSTYLFIATVLTAGTAFLMWLGEQITLKGIGNGISVIIFAGIVAAI 192
Query: 260 PASFGRTVAEAFQDGN------YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
P + + F N + + ++++ IL+V+G++Y+Q+ RKIPI YA R
Sbjct: 193 PTAVTQIYQAQFSGANDQLFLPIVTVLVLLVAIILIVVGVIYIQQGLRKIPIQYAKRVVG 252
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL----NPGG 369
+S +LP KVN++GV+P+IF+ S L P T+A F ++ K V P G
Sbjct: 253 NKPVGGQSTHLPIKVNAAGVIPVIFAISLLVTPRTVANFFEQNSVTKWIVNTFDYTQPVG 312
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
LLI F+Y+YTF+Q++P+ +++ L++QG IP VRPGK T + +L R++
Sbjct: 313 MIIYA---LLIIGFSYFYTFIQVNPEQMADNLRKQGGYIPTVRPGKDTEKHITKILYRLT 369
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAEIISQKYK 487
+GS+FLA++A P + LT GTS+LI+VG A DT +++++++I + YK
Sbjct: 370 FVGSLFLALIAILPVLFTSIPGLTLPPSIQIGGTSLLIVVGVALDTMKQIESQLIRRHYK 429
>gi|148559716|ref|YP_001259133.1| preprotein translocase subunit SecY [Brucella ovis ATCC 25840]
gi|148370973|gb|ABQ60952.1| preprotein translocase, SecY subunit [Brucella ovis ATCC 25840]
Length = 446
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 253/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKFNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|374576209|ref|ZP_09649305.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. WSM471]
gi|374424530|gb|EHR04063.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. WSM471]
Length = 443
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGE+GRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGESGRKLLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LPA+ + Q GL ++I + V+ IV+V+ A+
Sbjct: 183 GIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFVERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWINTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+V+LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|282911790|ref|ZP_06319586.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323486|gb|EFB53802.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus WBG10049]
Length = 430
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 241/407 (59%), Gaps = 16/407 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L L + ++G YIP GVN AF L++F GG + R I ++GIVP+I A
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITA 81
Query: 154 QIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY---- 208
IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 82 SIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGA 140
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---F 263
+N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LPAS F
Sbjct: 141 LIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
Query: 264 GRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
G+T +D + ++ + +++S ILL +G +YV EA RKIPI YA + T++ G Q +
Sbjct: 200 GQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-A 258
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLI 380
YLP KVNS+GV+P+IF+ + LP TL F + A A NP + + I+LI
Sbjct: 259 TYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLI 318
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA+++
Sbjct: 319 ILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIS 378
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 379 ILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 425
>gi|162456226|ref|YP_001618593.1| preprotein translocase subunit SecY [Sorangium cellulosum So ce56]
gi|161166808|emb|CAN98113.1| preprotein translocase SecY subunit [Sorangium cellulosum So ce56]
Length = 442
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 242/422 (57%), Gaps = 16/422 (3%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGG 136
+F K P L + + L LA+ R+G+++ GV+R A + + S LLS + FSGG
Sbjct: 9 NFHKIPELRRRVIFTLVMLAVYRVGVFVTTPGVDRNAMRQYVAKQSGGLLSFFNMFSGGA 68
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ L I +LGI+P+I+A I+ QL+ + + +L+K EGE GR+++ QYTRY +V ++
Sbjct: 69 LENLSIFALGIMPYISASIIMQLMGMVYKPIDELRK-EGEQGRRRIDQYTRYGTVALSLF 127
Query: 197 QAIGQVLYLRPY---------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGT 247
QA L VN + L +V LT G+AF +IGE+I++ + NG
Sbjct: 128 QAFSIAKMLEGLSSSETGAGIVNHPGIGFQLMTVITLTTGTAFLMWIGEQITERGVSNGV 187
Query: 248 SLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINY 307
SLLIF SI++ +P G A+ D + +A I+ + ++ I + + R+IPI Y
Sbjct: 188 SLLIFASIVTRIPEEIGNYFAQNAGDLQPLTMAAIVAFIVFVIAVIAFFENGRRQIPIVY 247
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNP 367
+ R R ++A+LP KVN+SG +P IF++S L P TLA A + A+ +N
Sbjct: 248 SRRQVGRRVYGGQTAHLPLKVNTSGTIPPIFASSLLMFPQTLANMNVPGAEQIQAI-INR 306
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G + LLI FF ++YT + P DV+E LK+Q A+IP +RPGK TA ++ V+ R
Sbjct: 307 GDWVFNTGYALLIIFFCFFYTNVTFQPVDVAENLKKQQANIPGIRPGKQTADYIHRVIQR 366
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I+V G++++A + P+++ + GF GTS++I+VG A DT +++A +I++ Y+
Sbjct: 367 ITVGGALYVAAVCVVPSIVGNLLRVPF--GFGGTSLMIVVGVALDTVNQLEAHLITRSYE 424
Query: 488 NI 489
+
Sbjct: 425 GL 426
>gi|239636213|ref|ZP_04677217.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
gi|239598229|gb|EEQ80722.1| preprotein translocase, SecY subunit [Staphylococcus warneri
L37603]
Length = 431
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 250/427 (58%), Gaps = 26/427 (6%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFS 133
FFK + K L L + ++G YIP GVN AF DQ + L++F
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAF----DQAAKGSQGVTDLLNTFG 62
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVG 192
GG + I ++GI+P+I A IV QLL I PK + K +G+ GR+K+ TRY ++
Sbjct: 63 GGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGDVGRRKINNVTRYFAII 121
Query: 193 FAIVQAIGQVLYL------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
A +Q+IG R V+ ++L ++TL T G+AF ++G++I+ +GNG
Sbjct: 122 LAFIQSIGMSFQFNNLYGGRLIVSHSVYSYLLIALTL-TAGTAFLIWLGDQITQFGVGNG 180
Query: 247 TSLLIFTSIISYLPASFGRTVAEAF---QDGN--YIGLATIIISFILLVLGIVYVQEAER 301
SL+IF I+S LP+S + +AF +D + ++ + +I++ +LL +G ++V EA+R
Sbjct: 181 ISLIIFAGILSTLPSSIIQAGQQAFVGQEDTSLAWLKIVALIVALVLLTIGAIFVLEAKR 240
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KK 360
KIPI YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A ++
Sbjct: 241 KIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQQ 299
Query: 361 AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF 420
A NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T +
Sbjct: 300 IADTANPSSNIGMVIYIVLIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKY 359
Query: 421 LKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAE 480
+ VL R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A+
Sbjct: 360 ITKVLYRLTFVGSIFLAVIAILPILATKFMGLPRSIQIGGTSLLIVIGVAIETMKSLEAQ 419
Query: 481 IISQKYK 487
+ ++YK
Sbjct: 420 VNQKEYK 426
>gi|258406165|ref|YP_003198907.1| preprotein translocase subunit SecY [Desulfohalobium retbaense DSM
5692]
gi|257798392|gb|ACV69329.1| preprotein translocase, SecY subunit [Desulfohalobium retbaense DSM
5692]
Length = 435
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 250/405 (61%), Gaps = 16/405 (3%)
Query: 97 LALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L + RLGI+IP+ V+ +A F N QN+L D FSGGG+ +L I +LGI+P+I+A
Sbjct: 25 LVVYRLGIHIPIPMVDGQALAEFFAN-AQNTLFGLFDMFSGGGLSKLSIFALGIMPYISA 83
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR------- 206
I+ QLL ++PKL++L K+EG +G+KK+ +YTRY +V +VQ G L
Sbjct: 84 SIIIQLLTVVSPKLEEL-KKEGASGQKKITEYTRYLTVLITLVQGFGISFGLERMTSPTG 142
Query: 207 -PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P + D + LT+V LT G+ F ++GE+I+D +GNG SL+IF I++ LP + G
Sbjct: 143 APVIPDPGWMFRLTTVITLTTGTVFLMWLGEQITDRGIGNGISLIIFGGIVARLPGAAGN 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
T + L ++++ +L VLG IV+++ +R++PI+YA R R ++++L
Sbjct: 203 TFRLMSAGEMSLFLVLLLLTVMLGVLGFIVFMERGQRRLPIHYAKRQMGRKMYGGQTSHL 262
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P +VN++GV+P IF++S L P T+A F+ + +++ + PG + Y + LI FF
Sbjct: 263 PLRVNTAGVIPPIFASSILMFPATVANFSQVQWMQEFSNYFRPGSTIYTLVFVALILFFC 322
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + DP D+++ L++QG IP +RPG T ++ VLSRI++ G++++A + P
Sbjct: 323 YFYTAIIFDPKDIADNLRKQGGFIPGIRPGLKTKQYIDKVLSRITLWGALYVAAICVLPM 382
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ + F GT++LI+VG A DT ++Q+ +IS +Y+ +
Sbjct: 383 LLISQFNVPFY--FGGTALLIVVGVAMDTMGQIQSHVISNQYQGL 425
>gi|257065013|ref|YP_003144685.1| preprotein translocase subunit SecY [Slackia heliotrinireducens DSM
20476]
gi|256792666|gb|ACV23336.1| preprotein translocase, SecY subunit [Slackia heliotrinireducens
DSM 20476]
Length = 426
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 244/416 (58%), Gaps = 12/416 (2%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL-LSTLDSFSGGGIGR 139
FK P L K L L LAL RLG +IP+ G+ F + ++ LD F+GG +
Sbjct: 9 FKVPELRNKILFTLAILALYRLGAFIPVPGIPFNEFANAFATGGVGMTMLDLFTGGALSH 68
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
+ SLGI+P+I A I+ QL+ + P + K EGE GR+K+ Q TRY ++G ++ AI
Sbjct: 69 FSVFSLGIMPYITAAIIMQLMQGVIPAVGRWAK-EGETGRRKITQTTRYLTLGLGLINAI 127
Query: 200 GQVLYLRP--YVNDFSTD-----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
G + + Y FST+ + V L +G+A ++GE I+ +GNG SL+IF
Sbjct: 128 GYLFLFKSSQYGVVFSTEIPEIVTDIVVVVTLVVGTALIMWMGELITQRGIGNGMSLIIF 187
Query: 253 TSIISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRY 311
TSI+S +PA+ +V + G II+ +L + I+YV+ A+R+IP+ YA R
Sbjct: 188 TSIVSRVPAAIFSSVTLSDDTGMGIAVTVLIIVVVLLCIPAIIYVERAQRRIPVTYAKRL 247
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
R +S Y+P K+N++GV+PIIF+++ + P +A + L A A++ G +
Sbjct: 248 QGRRQMGGQSTYIPLKINAAGVIPIIFASALIYFPAQIAALFNVGWLTSFANAISAGPAN 307
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
++ T IL++ FF Y+YT + +P++ SE + +QG +IP +RPG +T A+++ V+ +++
Sbjct: 308 WILTFILIV-FFAYFYTSMVFNPEETSENIHKQGGNIPGIRPGPATTAYIRNVIRHVTLP 366
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G +F+A++A P+++ T+ + F GTS+LI++G A DT KV+A++ S Y+
Sbjct: 367 GGIFIALIAVVPSILFYFTNNQLIQAFGGTSILIMIGVALDTMNKVEAQLKSYNYE 422
>gi|148256372|ref|YP_001240957.1| preprotein translocase subunit SecY [Bradyrhizobium sp. BTAi1]
gi|146408545|gb|ABQ37051.1| protein translocase subunit secY/sec61 alpha [Bradyrhizobium sp.
BTAi1]
Length = 444
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 247/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKMLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q GL I+I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|222148386|ref|YP_002549343.1| preprotein translocase subunit SecY [Agrobacterium vitis S4]
gi|221735374|gb|ACM36337.1| Preprotein translocase SECY subunit [Agrobacterium vitis S4]
Length = 446
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 250/438 (57%), Gaps = 24/438 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + L L + RLG +IPL G+N EA+ S
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRIWFTLAALLVYRLGTHIPLPGLNPEAYAAAFKGQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L++L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVQRMAIFALGIMPYISASIIVQLMTSVVPSLENL-KKEGEQGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISD 240
YTRY +V +QA G + L + N TD + L++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGTLQAYGIAVGLE-HGNGLVTDPGLFFRLSTVVTLLGGTMFLMWLGEQITS 181
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVY 295
+GNG SL+IF I + LP + T+ + G L+T +I++ IL+ +G IV+
Sbjct: 182 RGIGNGISLIIFAGIAAGLPTALAGTL----ELGRTGALSTALILTVILVAIGVIALIVF 237
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI 355
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP T A FTG
Sbjct: 238 FERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATAAGFTGG 297
Query: 356 AALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
+ L A AL G Y+ LLI FF ++YT + +P D ++ LK+ G IP +
Sbjct: 298 STLPAWATTIISALGHGQPAYMVLYALLIGFFAFFYTAIVFNPKDTADNLKKHGGFIPGI 357
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG+ TA ++ VL+RI+V+G+++L + P ++ T + G GTS+LI+V
Sbjct: 358 RPGERTAEYIDYVLTRITVVGAIYLVFVCILPEILVSQTGVPLSLG--GTSLLIVVSVTL 415
Query: 472 DTARKVQAEIISQKYKNI 489
DT +VQ +I+Q+Y+ +
Sbjct: 416 DTVAQVQGHLIAQQYEGL 433
>gi|332307750|ref|YP_004435601.1| preprotein translocase subunit SecY [Glaciecola sp. 4H-3-7+YE-5]
gi|410642224|ref|ZP_11352739.1| preprotein translocase subunit SecY [Glaciecola chathamensis S18K6]
gi|410644997|ref|ZP_11355466.1| preprotein translocase subunit SecY [Glaciecola agarilytica NO2]
gi|332175079|gb|AEE24333.1| preprotein translocase, SecY subunit [Glaciecola sp. 4H-3-7+YE-5]
gi|410135507|dbj|GAC03865.1| preprotein translocase subunit SecY [Glaciecola agarilytica NO2]
gi|410138174|dbj|GAC10926.1| preprotein translocase subunit SecY [Glaciecola chathamensis S18K6]
Length = 439
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 246/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ DQ +++ + FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLAELFDQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 77 ALGIMPYITASIIIQLLTVMHPPMMEL-KKEGEAGRRKISQYTRYFTLVLATFQAIGIAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I+S L
Sbjct: 136 NLPNLISGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVSGL 195
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P + G+T AE + G+ L ++I I++ + +V+V+ +R+I +NYA R R
Sbjct: 196 PTAIGQT-AEQARQGDLNLLFLLLIGVIIVAITYFVVFVERGQRRIVVNYAKRQQGRKVF 254
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP KVN +GV+P IF++S + PGT+A + G + L++ A+ L+PG Y+
Sbjct: 255 AAQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESFSWLQEVALMLSPGQPLYV 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G+
Sbjct: 315 MFYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYVDKVMTRLTLAGA 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 375 LYITFICLVPEFMLIAWNVPFY--FGGTSLLIMVVVIMDFMAQVQTHLMSHQYESV 428
>gi|251799622|ref|YP_003014353.1| preprotein translocase subunit SecY [Paenibacillus sp. JDR-2]
gi|247547248|gb|ACT04267.1| preprotein translocase, SecY subunit [Paenibacillus sp. JDR-2]
Length = 433
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 248/411 (60%), Gaps = 27/411 (6%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R+G +IP GV+++ F +DQ+ +L L++FSGG + I ++GI P+I A
Sbjct: 25 LLVYRIGAFIPAPGVDKDVF-KQVDQSGVNLFGLLNTFSGGALYHFSIFAIGIAPYITAS 83
Query: 155 IVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPY---- 208
I+ QLL+ + PK + K EGE G+KK+ Q TRY +V ++Q + + R Y
Sbjct: 84 IIVQLLSMDVIPKFAEWAK-EGENGKKKLAQITRYGTVILGLLQGFATAIGFNRQYNYEM 142
Query: 209 -VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
N D++L ++ +LT G +F ++GE+I++ +GNG S+LIF +I + +P RT+
Sbjct: 143 VPNANFVDYLLIAL-VLTAGVSFLMWLGEQITERGIGNGISVLIFAAIAASIPQHI-RTI 200
Query: 268 AE---AFQDGNY---IGLATII-ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
A QDGN IG +I ++ +L+++G+++VQ+ RKIP+ YA R R +
Sbjct: 201 YTTEFASQDGNLFWSIGKVVLIAVAIVLIIVGVIFVQQGIRKIPVQYAKRVVGRKMYGGQ 260
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTN 376
S ++P KVN +GV+P+IF+ S L P T+A+F T + P G +
Sbjct: 261 STHIPMKVNGAGVIPVIFAISLLMFPATIAQFWSGATWADWIMHNLTYTQPLG---MVLY 317
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLI F ++YTF+Q++P +++Q+K+ G IP +RPGK T+++L VLSRI++ G++FL
Sbjct: 318 VLLIIGFTFFYTFVQINPVQMADQMKKNGGYIPGIRPGKPTSSYLTRVLSRITLTGAIFL 377
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A+++ P V + L A GTS+LI++G A DT +++++++I + YK
Sbjct: 378 AVISLLPVVFGEIAGLPASVRLGGTSLLIVIGVALDTMKQIESQLIKRHYK 428
>gi|239787583|emb|CAX84051.1| Preprotein translocase SecY family protein [uncultured bacterium]
Length = 440
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 248/418 (59%), Gaps = 26/418 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L LG L + R+G ++P G++ +A DQ +LL + FSGG + RL + +LG
Sbjct: 22 RLLFTLGMLIVYRIGAHVPTPGIDPKALAAFFDQQQGTLLGMFNMFSGGALSRLTVFALG 81
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I++ I+ QL+ + PKL+ + K+EGE GR+K+ QYTRY +V +I Q G L
Sbjct: 82 IMPYISSSIILQLMTAVFPKLEAI-KKEGELGRRKINQYTRYGTVVLSIFQGFGIAYGLE 140
Query: 207 PYVND-----FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
W +T++TL G+AF ++GE+I+ +GNG SL+IF I++ L
Sbjct: 141 SMQAGGLGVVVEPGWAFRVMTVITLTSGTAFIMWVGEQITARGIGNGISLIIFAGIVANL 200
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-----LGIVYVQEAERKIPINYASRYTS- 313
P + +T+ E + G+ L + + F+L++ I++++ A+R+I + YA R S
Sbjct: 201 PIALVKTL-ELARTGD---LQPLFVLFLLVMSVAVTAFIIFMERAQRRITVQYAKRQVSG 256
Query: 314 --RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
GG S +LP KVN+SGV+P IF++S + P T+A F LK AA AL+PG
Sbjct: 257 RRMVGG--ESTHLPLKVNTSGVIPPIFASSIILFPVTIANFAPWEWLKSAANALSPGHVA 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ L I FF ++YT + +P + ++ L++ G +P +RPG TA +L +L+R++++
Sbjct: 315 YMVVYSLAIVFFCFFYTAIVFNPQETADNLQKYGGFVPGIRPGVRTAEYLDRILTRLTLV 374
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+V++ + P ++ + ++ + F GTS+LI+VG DTA ++Q+ +IS++Y+ +
Sbjct: 375 GAVYVTAVCLLPEILISSYNVPFY--FGGTSMLIVVGVTMDTASQIQSFLISRQYEGL 430
>gi|71729179|gb|EAO31300.1| SecY protein [Xylella fastidiosa Ann-1]
Length = 457
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 255/439 (58%), Gaps = 26/439 (5%)
Query: 77 DFGDFFKG--PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSF 132
+FG+ F L + L LLG L + R+G Y+P+ GVN EA + + + ++ + F
Sbjct: 8 NFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMF 67
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + R I +L ++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V
Sbjct: 68 SGGALHRFSIFALNVMPYISASIVVQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVI 126
Query: 193 FAIVQAIGQVLYLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
A++Q L L+ V +V+T++ LT G+ F ++GE++++ +G
Sbjct: 127 LAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVMTAIVALTAGTVFLMWVGEQVTERGIG 186
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERK 302
NG S++IF I++ LP S +T+ +AF+ ++ +II FI+L +V+V+ R+
Sbjct: 187 NGVSMIIFAGIVAGLPGSVLQTI-DAFRSDALSLISLLIIVFIVLSFTFFVVFVERGLRR 245
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----- 357
I +NYA R R+ + +S++LP K+N +GV+P IF++S LA P TL+ ++G A+
Sbjct: 246 IAVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSIWSGQASSNTLF 305
Query: 358 ---LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
L++ + AL PG ++ +LI F ++YT L + ++ LK+ GA IP +RPG
Sbjct: 306 GAWLQRVSSALGPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPG 365
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
K+T+ ++ VL+R++ +GS++L I+ P ++ + + A F GTS+LI V D
Sbjct: 366 KATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQ--SRIGASFHFGGTSLLIAVVVVMDFI 423
Query: 475 RKVQAEIISQKYKNIEFYD 493
++Q S +Y + F++
Sbjct: 424 SQIQVHQASNQYDGVSFFN 442
>gi|336322771|ref|YP_004602738.1| preprotein translocase subunit SecY [Flexistipes sinusarabici DSM
4947]
gi|336106352|gb|AEI14170.1| preprotein translocase, SecY subunit [Flexistipes sinusarabici DSM
4947]
Length = 438
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 239/411 (58%), Gaps = 17/411 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L L L + R+G ++P G+N +A Q S +L +D F+GG + RL + LG
Sbjct: 17 RILFTLALLIVYRIGTHVPTPGINSDALQQFFAQQSGNILGMVDMFTGGALSRLTVFGLG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QLL + P L +L K++G G++K+ +YTRY +VG + VQ +G + L
Sbjct: 77 IMPYISASIIIQLLTVVVPHLAEL-KKQGSEGQEKITKYTRYGTVGISAVQGLGIAIGLE 135
Query: 207 PYVNDFST------DWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ T W VT LTL G+ F ++GERI++ +GNG SL+IF I++
Sbjct: 136 AMNSPTGTAVVMFPGWGFRLVTALTLTTGTVFLMWLGERITEKGIGNGISLIIFAGIVAR 195
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRS- 315
PA+ T Q G + I++ I+L IVYV+ + R++PI Y + + +
Sbjct: 196 FPAAVANTF-RMMQTGELQIITLIVVLAIILGVTAAIVYVEISSRRLPIQYVRKAGAGTR 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
GG ++YLP K+N + V+PIIF+ S ++ P TL+ F+ + + V +P Y
Sbjct: 255 GGNVSNSYLPLKLNPANVIPIIFAASIMSFPSTLSTFSQNSIFSQIGVWFSPSSPVYYIL 314
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
++LI FF Y+YT + +PDDV++ +++ G IP RPGK+T+ F+ VLSR++ +G+++
Sbjct: 315 YVVLIVFFTYFYTSIIFNPDDVADNIQKSGGVIPGKRPGKATSDFIDYVLSRLTFIGALY 374
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
L++LA P I ++ + F GTS+LI++G D +++++ +I+ Y
Sbjct: 375 LSVLAILPQFIISWFNVPFY--FGGTSLLIVIGVGLDLIQRIESHLITHNY 423
>gi|379796552|ref|YP_005326553.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356873545|emb|CCE59884.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 430
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG++ +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQSAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVTQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|117924175|ref|YP_864792.1| protein translocase subunit secY/sec61 alpha [Magnetococcus marinus
MC-1]
gi|117607931|gb|ABK43386.1| protein translocase subunit secY/sec61 alpha [Magnetococcus marinus
MC-1]
Length = 442
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 250/418 (59%), Gaps = 26/418 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L LG L + R+G ++P G++ +A +Q SLL + FSGG + RL + +LG
Sbjct: 25 RILFTLGMLIVYRIGAHVPTPGIDPQALATFFEQQQGSLLGMFNMFSGGALSRLTVFALG 84
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL+ + PKL+ + K+EGEAGR+K+ QYTRY ++ A+ Q G L
Sbjct: 85 IMPYISASIIIQLMTAVFPKLEAI-KKEGEAGRRKITQYTRYGTIVLALFQGFGIAYGLE 143
Query: 207 PY-------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
V + ++ L +V LT G+AF ++GE+I+D +GNG SL+IF+ I++ L
Sbjct: 144 SMKAGGLNVVIEPGMEFRLMTVLTLTAGTAFLMWVGEQITDRGIGNGISLIIFSGIVANL 203
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISF-----ILLVLGIVYVQEAERKIPINYASRYTS- 313
P + T+ A + G+ LA +++ F I++ I++++ A+R+I I YA R S
Sbjct: 204 PVALFNTLQLA-RTGD---LAPLLVLFLIAMAIVVTAFIIFMERAQRRITIQYAKRQVSG 259
Query: 314 --RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
GG S++LP KVN++GV+P IF++S + P T+A F K+ A +PG
Sbjct: 260 RRMVGG--ESSHLPLKVNTAGVIPPIFASSIILFPVTIANFMPWEGFKEFAAMFSPGQLG 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT + +P++ ++ L++ G IP +RPGK T+ +L +LSR++++
Sbjct: 318 YMVFYSAAILFFCFFYTAIVFNPEETADNLRKYGGFIPGIRPGKRTSDYLDKILSRLTLV 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P ++ ++ + F GTS+LI+VG DT ++Q+ +IS++Y+ +
Sbjct: 378 GAIYVTAVCLLPEILIAQYNVPFY--FGGTSMLIVVGVTMDTTAQIQSFLISRQYEGL 433
>gi|262048497|ref|ZP_06021381.1| preprotein translocase SecY [Staphylococcus aureus D30]
gi|259163355|gb|EEW47913.1| preprotein translocase SecY [Staphylococcus aureus D30]
Length = 430
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 246/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPIFATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|62290124|ref|YP_221917.1| preprotein translocase subunit SecY [Brucella abortus bv. 1 str.
9-941]
gi|82700047|ref|YP_414621.1| preprotein translocase subunit SecY [Brucella melitensis biovar
Abortus 2308]
gi|189024362|ref|YP_001935130.1| preprotein translocase subunit SecY [Brucella abortus S19]
gi|237815632|ref|ZP_04594629.1| preprotein translocase, SecY subunit [Brucella abortus str. 2308 A]
gi|260546672|ref|ZP_05822411.1| C-5 cytosine-specific DNA methylase [Brucella abortus NCTC 8038]
gi|260754956|ref|ZP_05867304.1| preprotein translocase subunit SecY [Brucella abortus bv. 6 str.
870]
gi|260758172|ref|ZP_05870520.1| preprotein translocase subunit SecY [Brucella abortus bv. 4 str.
292]
gi|260761998|ref|ZP_05874341.1| preprotein translocase subunit SecY [Brucella abortus bv. 2 str.
86/8/59]
gi|260883965|ref|ZP_05895579.1| preprotein translocase subunit SecY [Brucella abortus bv. 9 str.
C68]
gi|261214210|ref|ZP_05928491.1| preprotein translocase subunit SecY [Brucella abortus bv. 3 str.
Tulya]
gi|297248519|ref|ZP_06932237.1| preprotein translocase, SecY subunit [Brucella abortus bv. 5 str.
B3196]
gi|376273057|ref|YP_005151635.1| preprotein translocase subunit SecY [Brucella abortus A13334]
gi|423166693|ref|ZP_17153396.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI435a]
gi|423170933|ref|ZP_17157608.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI474]
gi|423172985|ref|ZP_17159656.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI486]
gi|423178322|ref|ZP_17164966.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI488]
gi|423180363|ref|ZP_17167004.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI010]
gi|423183495|ref|ZP_17170132.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI016]
gi|423185565|ref|ZP_17172179.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI021]
gi|423188700|ref|ZP_17175310.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI259]
gi|62196256|gb|AAX74556.1| SecY, preprotein translocase [Brucella abortus bv. 1 str. 9-941]
gi|82616148|emb|CAJ11191.1| C-5 cytosine-specific DNA methylase:SecY protein [Brucella
melitensis biovar Abortus 2308]
gi|189019934|gb|ACD72656.1| C-5 cytosine-specific DNA methylase [Brucella abortus S19]
gi|237788930|gb|EEP63141.1| preprotein translocase, SecY subunit [Brucella abortus str. 2308 A]
gi|260095722|gb|EEW79599.1| C-5 cytosine-specific DNA methylase [Brucella abortus NCTC 8038]
gi|260668490|gb|EEX55430.1| preprotein translocase subunit SecY [Brucella abortus bv. 4 str.
292]
gi|260672430|gb|EEX59251.1| preprotein translocase subunit SecY [Brucella abortus bv. 2 str.
86/8/59]
gi|260675064|gb|EEX61885.1| preprotein translocase subunit SecY [Brucella abortus bv. 6 str.
870]
gi|260873493|gb|EEX80562.1| preprotein translocase subunit SecY [Brucella abortus bv. 9 str.
C68]
gi|260915817|gb|EEX82678.1| preprotein translocase subunit SecY [Brucella abortus bv. 3 str.
Tulya]
gi|297175688|gb|EFH35035.1| preprotein translocase, SecY subunit [Brucella abortus bv. 5 str.
B3196]
gi|363400663|gb|AEW17633.1| preprotein translocase, SecY subunit [Brucella abortus A13334]
gi|374539511|gb|EHR11015.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI474]
gi|374542924|gb|EHR14408.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI435a]
gi|374543540|gb|EHR15022.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI486]
gi|374545561|gb|EHR17022.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI488]
gi|374548927|gb|EHR20374.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI010]
gi|374549558|gb|EHR21001.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI016]
gi|374558358|gb|EHR29751.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI259]
gi|374559656|gb|EHR31041.1| preprotein translocase, SecY subunit [Brucella abortus bv. 1 str.
NI021]
Length = 446
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 253/441 (57%), Gaps = 26/441 (5%)
Query: 67 VAAAMED--SSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++F F K L + LG L + R G YIPL G+N +A Q+
Sbjct: 1 MASAAEQLVSNLNFSAFSKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFQQH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K EGEAGRK
Sbjct: 61 SQGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KNEGEAGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERI 238
+ QYTRY +V A+VQA + L+ V + ++++SV L G+ F ++GE+I
Sbjct: 120 INQYTRYGTVLLALVQAYAISVGLQSGNGIVTNPGPFFIVSSVITLVGGTMFLMWLGEQI 179
Query: 239 SDLKLGNGTSLLIFTSIISYLPAS------FGRTVAEAFQDGNYIGLATIIISFILLVLG 292
+ +GNG SL+IF+ I++ LP + GRT A G +G +I+ + LV
Sbjct: 180 TARGIGNGISLIIFSGIVANLPHAISGTLELGRT--GALSTGLILG---VIVLAVALVAV 234
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+V+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A F
Sbjct: 235 IVFVERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPATVAGF 294
Query: 353 TGIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 408
+ A AL G Y+ L+AFF ++YT + +P D ++QLK+ I
Sbjct: 295 ANTTEMPAWATTVLNALGHGQPLYMLFYAALMAFFCFFYTAIVFNPKDTADQLKKHSGFI 354
Query: 409 PLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 468
P +RPG+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V
Sbjct: 355 PGIRPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFLISATGVPFYLG--GTSLLIVVS 412
Query: 469 CATDTARKVQAEIISQKYKNI 489
DT ++Q +I+ +Y+ +
Sbjct: 413 VTLDTVAQIQGHLIAHQYEGL 433
>gi|395784143|ref|ZP_10463982.1| preprotein translocase, SecY subunit [Bartonella melophagi K-2C]
gi|395423898|gb|EJF90086.1| preprotein translocase, SecY subunit [Bartonella melophagi K-2C]
Length = 448
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A +Q++
Sbjct: 4 AAEQLASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEQHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L ++ F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLVNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLESL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A++QA G + L V + + +++V L G+ F ++GE+
Sbjct: 123 YTRYITVVLAVLQAFGVAVALETGIGTGLQIVLEPGVMFRISAVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYV 296
I+ +GNG SL+IFT I++ P++F + + Q L I+ I+ V+G IV++
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANFPSTFAQLLTTHSQADLSTFLLIAIVLIIVFVVGFIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++G++P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQSDMSHLPLKLNTAGIIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWIQTISFSLGHGQPLYMIIYAALMAFFCFFYTAIVFNPSDTADQLKKHLGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALHVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +I+ +Y+ +
Sbjct: 421 SQIQGHLIAHQYEGL 435
>gi|75675576|ref|YP_317997.1| preprotein translocase subunit SecY [Nitrobacter winogradskyi
Nb-255]
gi|74420446|gb|ABA04645.1| protein translocase subunit secY/sec61 alpha [Nitrobacter
winogradskyi Nb-255]
Length = 443
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++F F K L + LG L + RLG YIPL G++ + V N
Sbjct: 4 AAEQLAANLNFSAFSKADELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWQKVFNSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGGGI R+ I +L I+P+I+A I+ QLL ++PKL+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFSGGGIDRMAIFALNIMPYISAAIILQLLTSVSPKLEAL-KKEGEAGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L+ N + ++L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAFFQSYGIAVGLQGAGNVVTNPGMFFLLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I I++ LP++ + Q G+ I++ ++ V+ IV+++ A+
Sbjct: 183 GIGNGISLIIMAGIVAELPSALASMLELGRQGALSTGIILIVLIMVVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFDGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L I LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWINTQLGHGRPMFLILYIALIVFFTFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+V G+V+LA++ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVPGAVYLAVVCLIPEILISYAAVPFY--FGGTSLLIVVSVTMDTVSQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|74316443|ref|YP_314183.1| preprotein translocase subunit SecY [Thiobacillus denitrificans
ATCC 25259]
gi|74055938|gb|AAZ96378.1| SecY protein [Thiobacillus denitrificans ATCC 25259]
Length = 437
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 244/416 (58%), Gaps = 13/416 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L LLG L + R+G +IP+ G++ + Q +L + FSGG + R
Sbjct: 12 GDLKRRLLFLLGALIVYRIGTFIPVPGIDPLVLDQLFKSQQGGILGMFNMFSGGALSRFS 71
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+ +LGI+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+K+ QYTRY ++ A+ QA+G
Sbjct: 72 VFALGIMPYISASIIVQLMTTVSPQLEAL-KKEGEAGRRKITQYTRYGTLFLAVFQALGI 130
Query: 202 VLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ L V D + L +V LT G+ F ++GE+I++ LGNG S++IF I +
Sbjct: 131 AIALEAQAGLVLDPGMAFRLITVVTLTAGTMFLMWLGEQITERGLGNGISIIIFAGIAAG 190
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGG 317
LP++ G T+ I L ++ +LLV +V+V+ +RKI +NYA R +
Sbjct: 191 LPSAIGGTLELTRTGAFSIPLVLMLFVGVLLVTALVVFVERGQRKILVNYAKRQVGKMVV 250
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S++LP K+N +GV+P IF++S + P TLA + G + LK L+PG Y+
Sbjct: 251 GGQSSHLPLKLNMAGVIPPIFASSIILFPATLAGWFGSGENMGWLKDVGATLSPGQPVYV 310
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
L I FF ++YT L +P + ++ LK+ GA +P +RPG TA ++ +L+R++++G+
Sbjct: 311 LLYALAIIFFCFFYTALVFNPKETADNLKKSGAFVPGIRPGDQTARYIDKILTRLTLVGA 370
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ ++ P + ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 371 IYITLVCLLPEFLILKWNVPFY--FGGTSLLIIVVVTMDFMAQVQAYVMSHQYEGL 424
>gi|88861474|ref|ZP_01136100.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
gi|88816522|gb|EAR26351.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Pseudoalteromonas
tunicata D2]
Length = 442
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 245/418 (58%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAEFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL I+P + +L K+EGE GRKK+ QYTRYA++ A VQ+IG
Sbjct: 78 ALGIMPYISASIIMQLLTHIHPAMIEL-KKEGEQGRKKISQYTRYATLVLATVQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPNMMQGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P++ G T AE + G+ L ++I+ I+ + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGST-AEMARQGDLNVLMLLVIAVIVFAVTYLVVFFERGQRRIVVNYAKRQQGRQVF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-----IA-ALKKAAVALNPGGSF 371
+S +LP KVN +GV+P IF++S + PGT+A + G IA AL+ ++AL+PG
Sbjct: 256 AAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPIADALQTISLALSPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 316 YAMVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLA 375
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 376 GALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|417644063|ref|ZP_12294082.1| preprotein translocase, SecY subunit [Staphylococcus warneri
VCU121]
gi|445059046|ref|YP_007384450.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
gi|330685127|gb|EGG96791.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU121]
gi|443425103|gb|AGC90006.1| preprotein translocase subunit SecY [Staphylococcus warneri SG1]
Length = 431
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 250/427 (58%), Gaps = 26/427 (6%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFS 133
FFK + K L L + ++G YIP GVN AF DQ + L++F
Sbjct: 7 SFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPNAF----DQAAKGSQGVTDLLNTFG 62
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVG 192
GG + I ++GI+P+I A IV QLL I PK + K +G+ GR+K+ TRY ++
Sbjct: 63 GGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFSEWAK-QGDVGRRKINNVTRYFAII 121
Query: 193 FAIVQAIGQVLYL------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
A +Q+IG R V+ ++L ++TL T G+AF ++G++I+ +GNG
Sbjct: 122 LAFIQSIGMSFQFNNLYGGRLIVSHSVYSYLLIALTL-TAGTAFLIWLGDQITQFGVGNG 180
Query: 247 TSLLIFTSIISYLPASFGRTVAEAF---QDGN--YIGLATIIISFILLVLGIVYVQEAER 301
SL+IF I+S LP+S + +AF +D + ++ + +I++ +LL +G ++V EA+R
Sbjct: 181 ISLIIFAGILSTLPSSIIQAGQQAFVGQEDTSLAWLKIVALIVALVLLTVGAIFVLEAKR 240
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KK 360
KIPI YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F A ++
Sbjct: 241 KIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQQ 299
Query: 361 AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF 420
A NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T +
Sbjct: 300 IADTANPSSNIGMVIYIVLIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKY 359
Query: 421 LKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAE 480
+ VL R++ +GS+FLA++A P + + L GTS+LI++G A +T + ++A+
Sbjct: 360 ITKVLYRLTFVGSIFLAVIAILPILATKFMGLPRSIQIGGTSLLIVIGVAIETMKSLEAQ 419
Query: 481 IISQKYK 487
+ ++YK
Sbjct: 420 VNQKEYK 426
>gi|319407406|emb|CBI81057.1| translocase SecY subunit precursor [Bartonella sp. 1-1C]
Length = 448
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++FG F + L + L L + R G YI L G+N + + ++
Sbjct: 4 AAEQLVSNMNFGAFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDVLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK V Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIVPSLEAL-KKEGELGRKIVNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A++QA G + L V + + +++V L G+ F ++GE+
Sbjct: 123 YTRYMTVILAVLQAFGIAVALETGIGTGLQVVIEPGIIFRISAVISLVGGTIFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I+++ +L++ IV+V
Sbjct: 183 ITSRGIGNGISLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIVVAAVLIIGVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++ P K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRIIIQYPKRQVGNQMFQGDMSHFPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + L+ G Y+ +L+AFF ++YT + P D +EQLKR IP +RPG
Sbjct: 303 PQWVQNISFFLSHGQPLYMIVYAVLMAFFCFFYTAIVFSPSDTAEQLKRHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + T H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVIGAIYIILICLLPEFMISTLHIPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +YK +
Sbjct: 421 AQIQGSLVAHQYKGL 435
>gi|421078713|ref|ZP_15539663.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
gi|392523189|gb|EIW46365.1| preprotein translocase, SecY subunit [Pelosinus fermentans JBW45]
Length = 418
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 219/391 (56%), Gaps = 9/391 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G +IP+ GV+ +L LD FSGG + + I ++ I P+INA I+ QL+
Sbjct: 29 RAGTHIPVPGVDVSVIEQMFTSGNLFGLLDLFSGGALSKFSIFAMSITPYINASIIMQLI 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ P + K EGE GRKK+ Q TRY +V +QAIG + L+ + + L
Sbjct: 89 TIVVPTFEQWSK-EGEEGRKKLTQITRYGTVLLGFIQAIGMAIGLKAAIINPGIASTLLI 147
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS----FGRTVAEAFQDGNY 276
LT G+ F ++GE+I++ +GNG SL+IF I+S LP + A N
Sbjct: 148 ALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSRLPDGLYMLYEYLTAGTINIFNV 207
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ A I ++ I+LV+ I + +R+IP+ YA R R S ++P KVN +GV+PI
Sbjct: 208 LLFAIIALAMIVLVIAI---TQGQRRIPVQYAKRVVGRKTYGGHSTHIPLKVNQAGVIPI 264
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDD 396
IF++S L P T+A+F IA +K A G LLI FF Y+YT + L+ D
Sbjct: 265 IFASSVLMFPVTIAQFVDIAWVKTVAGYFAWGTPLQTALYALLIIFFTYFYTAVTLNISD 324
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
++E +K+ G IP +RPGK TA +L V++RI++ GS+FLA +A P I T++
Sbjct: 325 MAENMKKYGGFIPGLRPGKPTADYLDRVMTRITLAGSIFLAGIAILPNFIAAVTNIPGLN 384
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT ++++A ++ + Y+
Sbjct: 385 -FGGTALLIVVGVALDTMKQIEAIVLMRHYQ 414
>gi|257431678|ref|ZP_05608041.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
gi|257282557|gb|EEV12689.1| translocase subunit secY [Staphylococcus aureus subsp. aureus
E1410]
Length = 430
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 246/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRSKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|399543673|ref|YP_006556981.1| preprotein translocase subunit secY [Marinobacter sp. BSs20148]
gi|399159005|gb|AFP29568.1| Preprotein translocase subunit secY [Marinobacter sp. BSs20148]
Length = 440
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 247/413 (59%), Gaps = 24/413 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL LL Y R+G +IP+ G+N + +QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLALLVY----RIGAHIPVPGINPDRLAALFEQNQGTILSMFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ +NP L+ L K+EGEAGR+K+ QYTRY +V A++Q G + L
Sbjct: 82 MPYISASIIMQLMTAVNPTLEQL-KKEGEAGRRKISQYTRYGTVILALLQGAGISVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
F+ V +++ G+ F ++GE+I++ +GNG SLLIF I++ LP + G+
Sbjct: 141 QGVTFNDTLSFHFVAVVSFVSGAVFMMWLGEQITERGVGNGISLLIFAGIVAGLPGAIGQ 200
Query: 266 TVAEAFQDGNY-----IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
T+ +A ++G +G+ + I+ I V V+++ +R++ INYA R Q+
Sbjct: 201 TLEQA-RNGEMSMLLVLGIGVLAIAVIGFV---VFMERGQRRLTINYAKRQQGGRVFAQQ 256
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTN 376
S++LP KVN +GV+P IF++S L P +L ++ G+ L + AL P Y+
Sbjct: 257 SSHLPLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDISQALAPSQPLYIILF 316
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+ FF ++YT L +P +V++ LKR GA IP +RPG+ TA ++ VL+R+++ G++++
Sbjct: 317 AAAVVFFCFFYTALMYNPREVADNLKRSGAFIPGIRPGEQTAKYIDGVLTRLTLFGAMYI 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A ++ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 377 AAVSLFPQFLMVAGNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYESL 427
>gi|206972190|ref|ZP_03233137.1| preprotein translocase, SecY subunit [Bacillus cereus AH1134]
gi|218235395|ref|YP_002364979.1| preprotein translocase subunit SecY [Bacillus cereus B4264]
gi|296500963|ref|YP_003662663.1| preprotein translocase subunit SecY [Bacillus thuringiensis BMB171]
gi|365164104|ref|ZP_09360190.1| preprotein translocase subunit secY [Bacillus sp. 7_6_55CFAA_CT2]
gi|423415970|ref|ZP_17393090.1| preprotein translocase subunit secY [Bacillus cereus BAG3O-2]
gi|423422363|ref|ZP_17399394.1| preprotein translocase subunit secY [Bacillus cereus BAG3X2-2]
gi|423428236|ref|ZP_17405240.1| preprotein translocase subunit secY [Bacillus cereus BAG4O-1]
gi|423439415|ref|ZP_17416353.1| preprotein translocase subunit secY [Bacillus cereus BAG4X12-1]
gi|423507844|ref|ZP_17484411.1| preprotein translocase subunit secY [Bacillus cereus HD73]
gi|423578537|ref|ZP_17554648.1| preprotein translocase subunit secY [Bacillus cereus VD014]
gi|423632039|ref|ZP_17607785.1| preprotein translocase subunit secY [Bacillus cereus VD154]
gi|423638133|ref|ZP_17613785.1| preprotein translocase subunit secY [Bacillus cereus VD156]
gi|423645051|ref|ZP_17620667.1| preprotein translocase subunit secY [Bacillus cereus VD166]
gi|423646265|ref|ZP_17621835.1| preprotein translocase subunit secY [Bacillus cereus VD169]
gi|423653064|ref|ZP_17628363.1| preprotein translocase subunit secY [Bacillus cereus VD200]
gi|449086797|ref|YP_007419238.1| preprotein translocase, SecY subunit [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|206732764|gb|EDZ49939.1| preprotein translocase, SecY subunit [Bacillus cereus AH1134]
gi|218163352|gb|ACK63344.1| preprotein translocase, SecY subunit [Bacillus cereus B4264]
gi|296322015|gb|ADH04943.1| preprotein translocase subunit SecY [Bacillus thuringiensis BMB171]
gi|363613405|gb|EHL64922.1| preprotein translocase subunit secY [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094417|gb|EJQ02498.1| preprotein translocase subunit secY [Bacillus cereus BAG3O-2]
gi|401112769|gb|EJQ20643.1| preprotein translocase subunit secY [Bacillus cereus BAG4X12-1]
gi|401120080|gb|EJQ27881.1| preprotein translocase subunit secY [Bacillus cereus BAG3X2-2]
gi|401127158|gb|EJQ34887.1| preprotein translocase subunit secY [Bacillus cereus BAG4O-1]
gi|401221262|gb|EJR27886.1| preprotein translocase subunit secY [Bacillus cereus VD014]
gi|401262758|gb|EJR68896.1| preprotein translocase subunit secY [Bacillus cereus VD154]
gi|401267746|gb|EJR73802.1| preprotein translocase subunit secY [Bacillus cereus VD166]
gi|401271857|gb|EJR77860.1| preprotein translocase subunit secY [Bacillus cereus VD156]
gi|401287894|gb|EJR93661.1| preprotein translocase subunit secY [Bacillus cereus VD169]
gi|401303172|gb|EJS08735.1| preprotein translocase subunit secY [Bacillus cereus VD200]
gi|402442631|gb|EJV74552.1| preprotein translocase subunit secY [Bacillus cereus HD73]
gi|449020554|gb|AGE75717.1| preprotein translocase, SecY subunit [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 433
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 242/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|410664358|ref|YP_006916729.1| preprotein translocase subunit SecY [Simiduia agarivorans SA1 = DSM
21679]
gi|409026715|gb|AFU98999.1| preprotein translocase subunit SecY [Simiduia agarivorans SA1 = DSM
21679]
Length = 438
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 244/405 (60%), Gaps = 24/405 (5%)
Query: 101 RLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G++ E A + N +Q ++L + FSGG + R+ I +LGI+P+I+A I+ Q
Sbjct: 31 RIGTHIPVPGLDPERLASLFNQNQGTILGLFNMFSGGALERMSILALGIMPYISASIIIQ 90
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RPYVNDFSTDW 216
++ + P L+ L K+EG+AGR+K+ QYTRY +V A Q I + + Y + +
Sbjct: 91 MMTAVTPSLEQL-KKEGDAGRRKISQYTRYFTVILATFQGIAMAVGFSGQAYGGEPGFSF 149
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
+V L G+ F ++GE++++ +GNG S+LIF I++ LP++ G++ A Q +
Sbjct: 150 YFIAVVSLVTGAVFMMWLGEQVTERGIGNGISMLIFAGIVAGLPSAIGQSFESARQGDLH 209
Query: 277 IGLATIIISF--ILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
I L + I+F +L+V +V V+ +R+I +NYA R R +S++LP KVN +GV+
Sbjct: 210 I-LMLLAIAFLAVLIVWFVVRVERGQRRITVNYAKRQQGRHAMPAQSSHLPLKVNMAGVI 268
Query: 335 PIIFSTSSLALPGTLARF------TGIAALKKAAVALNPGGSFYLPTNILLIA----FFN 384
P IF++S L P +++ + G L++ A+A+ PG P N +L A FF
Sbjct: 269 PPIFASSLLLFPASISSWFGQGDGAGSEVLQEIALAIGPGQ----PLNFILFAGMIIFFT 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT L +P +V++ LK+ GA IP +RPG+ +A ++ VL+R++V+GS+++A + P
Sbjct: 325 FFYTALMFNPKEVADNLKKSGAYIPGIRPGEQSAKYIDQVLTRLTVVGSLYMAAVCLLPQ 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ T++ + G GTS+LI+V D +VQA + S +Y ++
Sbjct: 385 FLIVFTNVPFYLG--GTSLLIVVVVIMDFMSQVQAHLYSHQYDSL 427
>gi|453075576|ref|ZP_21978362.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
gi|452763002|gb|EME21289.1| preprotein translocase subunit SecY [Rhodococcus triatomae BKS
15-14]
Length = 437
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 257/436 (58%), Gaps = 33/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGV---NREAFVGNL---DQNSLLSTLD 130
F F+ P L K L LG +AL R G +P GV N +A + + DQ + S ++
Sbjct: 5 FVSAFRTPDLRRKILIALGLIALYRFGATLPSPGVDYGNVKACIDQISGSDQAGIYSLIN 64
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
FSGG + +L + ++GI+P+I A I+ QLL + P+ ++L+K EG++G+ K+ QYTRY S
Sbjct: 65 LFSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEELRK-EGQSGQAKMTQYTRYLS 123
Query: 191 VGFAIVQAIGQVLYL----------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
+ A++Q+ G V P + D S ++T V ++T G+A ++GE I++
Sbjct: 124 IALAVLQSTGIVALAARGQLLQGCSEPILADDSVFAMVTIVLVMTAGAALVMWMGELITE 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG SLLIF+ I S LP+ G+ + ++ G I A + ++ ++L+ G+V+V++ +
Sbjct: 184 RGVGNGMSLLIFSGIASRLPSE-GKAILDS--RGGLI-FAAVCVAALVLIAGVVFVEQGQ 239
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S YLP KVN +GV+P+IF++S L LP +A+ +G ++
Sbjct: 240 RRIPVQYAKRMVGRKMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPNLIAQLSGASSATD 299
Query: 361 AA--------VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
+ +NP Y+ LLI FF Y+Y + +P++ ++++K+ G IP +R
Sbjct: 300 PSWWQRFINEYLVNPSNPIYILIYFLLIVFFTYFYVAITFNPEERADEMKKFGGFIPGIR 359
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPA-VIEQTTHLTAFRGFAGTSVLILVGCAT 471
PG+ TA +L+ VLSRI++ G+++L ++A P + Q + ++ F G +VLILV
Sbjct: 360 PGRPTADYLQYVLSRITLPGAIYLGLIAVLPNFFLAQGSAGSSI--FGGAAVLILVSVGL 417
Query: 472 DTARKVQAEIISQKYK 487
DT ++++++++ + Y+
Sbjct: 418 DTVKQIESQLMQRNYE 433
>gi|30260321|ref|NP_842698.1| preprotein translocase subunit SecY [Bacillus anthracis str. Ames]
gi|42779211|ref|NP_976458.1| preprotein translocase subunit SecY [Bacillus cereus ATCC 10987]
gi|47570527|ref|ZP_00241154.1| preprotein translocase, secY subunit [Bacillus cereus G9241]
gi|49183164|ref|YP_026416.1| preprotein translocase subunit SecY [Bacillus anthracis str.
Sterne]
gi|49476721|ref|YP_034482.1| preprotein translocase subunit SecY [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|50196910|ref|YP_016735.2| preprotein translocase subunit SecY [Bacillus anthracis str. 'Ames
Ancestor']
gi|52145090|ref|YP_081741.1| preprotein translocase subunit SecY [Bacillus cereus E33L]
gi|65317579|ref|ZP_00390538.1| COG0201: Preprotein translocase subunit SecY [Bacillus anthracis
str. A2012]
gi|170689725|ref|ZP_02880898.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0465]
gi|170709453|ref|ZP_02899858.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0389]
gi|177656217|ref|ZP_02937179.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0174]
gi|190569429|ref|ZP_03022312.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
Tsiankovskii-I]
gi|217957705|ref|YP_002336249.1| preprotein translocase subunit SecY [Bacillus cereus AH187]
gi|222093900|ref|YP_002527950.1| preprotein translocase subunit secy [Bacillus cereus Q1]
gi|227812803|ref|YP_002812812.1| preprotein translocase subunit SecY [Bacillus anthracis str. CDC
684]
gi|229604655|ref|YP_002864781.1| preprotein translocase subunit SecY [Bacillus anthracis str. A0248]
gi|254686629|ref|ZP_05150488.1| preprotein translocase subunit SecY [Bacillus anthracis str.
CNEVA-9066]
gi|254726291|ref|ZP_05188073.1| preprotein translocase subunit SecY [Bacillus anthracis str. A1055]
gi|254735296|ref|ZP_05193004.1| preprotein translocase subunit SecY [Bacillus anthracis str.
Western North America USA6153]
gi|254739488|ref|ZP_05197186.1| preprotein translocase subunit SecY [Bacillus anthracis str. Kruger
B]
gi|254751240|ref|ZP_05203278.1| preprotein translocase subunit SecY [Bacillus anthracis str.
Vollum]
gi|254756851|ref|ZP_05208879.1| preprotein translocase subunit SecY [Bacillus anthracis str.
Australia 94]
gi|301051867|ref|YP_003790078.1| preprotein translocase SecY1 [Bacillus cereus biovar anthracis str.
CI]
gi|375282228|ref|YP_005102663.1| preprotein translocase subunit SecY [Bacillus cereus NC7401]
gi|384178037|ref|YP_005563799.1| preprotein translocase subunit SecY [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402554282|ref|YP_006595553.1| preprotein translocase subunit SecY [Bacillus cereus FRI-35]
gi|421640546|ref|ZP_16081128.1| preprotein translocase subunit SecY [Bacillus anthracis str. BF1]
gi|423357579|ref|ZP_17335174.1| preprotein translocase subunit secY [Bacillus cereus IS075]
gi|423376278|ref|ZP_17353592.1| preprotein translocase subunit secY [Bacillus cereus AND1407]
gi|423578018|ref|ZP_17554137.1| preprotein translocase subunit secY [Bacillus cereus MSX-D12]
gi|423608045|ref|ZP_17583938.1| preprotein translocase subunit secY [Bacillus cereus VD102]
gi|30253642|gb|AAP24184.1| preprotein translocase, SecY subunit [Bacillus anthracis str. Ames]
gi|42735126|gb|AAS39066.1| preprotein translocase, SecY subunit [Bacillus cereus ATCC 10987]
gi|47552811|gb|EAL11235.1| preprotein translocase, secY subunit [Bacillus cereus G9241]
gi|49177091|gb|AAT52467.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
Sterne]
gi|49328277|gb|AAT58923.1| preprotein translocase, SecY subunit [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|50082972|gb|AAT29210.2| preprotein translocase, SecY subunit [Bacillus anthracis str. 'Ames
Ancestor']
gi|51978559|gb|AAU20109.1| preprotein translocase, secY subunit [Bacillus cereus E33L]
gi|170125637|gb|EDS94559.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0389]
gi|170666312|gb|EDT17102.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0465]
gi|172079833|gb|EDT64948.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0174]
gi|190559466|gb|EDV13468.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
Tsiankovskii-I]
gi|217066086|gb|ACJ80336.1| preprotein translocase, SecY subunit [Bacillus cereus AH187]
gi|221237948|gb|ACM10658.1| preprotein translocase, SecY subunit [Bacillus cereus Q1]
gi|227005272|gb|ACP15015.1| preprotein translocase, SecY subunit [Bacillus anthracis str. CDC
684]
gi|229269063|gb|ACQ50700.1| preprotein translocase, SecY subunit [Bacillus anthracis str.
A0248]
gi|300374036|gb|ADK02940.1| preprotein translocase SecY1 [Bacillus cereus biovar anthracis str.
CI]
gi|324324121|gb|ADY19381.1| preprotein translocase subunit SecY [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358350751|dbj|BAL15923.1| preprotein translocase, SecY subunit [Bacillus cereus NC7401]
gi|401074445|gb|EJP82845.1| preprotein translocase subunit secY [Bacillus cereus IS075]
gi|401088735|gb|EJP96917.1| preprotein translocase subunit secY [Bacillus cereus AND1407]
gi|401203598|gb|EJR10434.1| preprotein translocase subunit secY [Bacillus cereus MSX-D12]
gi|401238728|gb|EJR45161.1| preprotein translocase subunit secY [Bacillus cereus VD102]
gi|401795492|gb|AFQ09351.1| preprotein translocase subunit SecY [Bacillus cereus FRI-35]
gi|403392362|gb|EJY89616.1| preprotein translocase subunit SecY [Bacillus anthracis str. BF1]
Length = 433
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 242/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWAK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|387143935|ref|YP_005732329.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus TW20]
gi|418955127|ref|ZP_13507075.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941819|emb|CBI50229.1| preprotein translocase SecY subunit [Staphylococcus aureus subsp.
aureus TW20]
gi|375371580|gb|EHS75350.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-189]
Length = 430
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGLAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|416840572|ref|ZP_11903819.1| preprotein translocase subunit SecY [Staphylococcus aureus O11]
gi|416846696|ref|ZP_11906685.1| preprotein translocase subunit SecY [Staphylococcus aureus O46]
gi|418895881|ref|ZP_13449959.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418929673|ref|ZP_13483525.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1750]
gi|421149828|ref|ZP_15609485.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|323440090|gb|EGA97805.1| preprotein translocase subunit SecY [Staphylococcus aureus O11]
gi|323442764|gb|EGB00390.1| preprotein translocase subunit SecY [Staphylococcus aureus O46]
gi|377718673|gb|EHT42844.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377763750|gb|EHT87604.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|394330003|gb|EJE56100.1| preprotein translocase subunit SecY [Staphylococcus aureus subsp.
aureus str. Newbould 305]
Length = 407
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 240/404 (59%), Gaps = 16/404 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + ++G YIP GVN AF L++F GG + R I ++GIVP+I A IV
Sbjct: 2 LVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIV 61
Query: 157 FQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY------V 209
QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y +
Sbjct: 62 MQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALII 120
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRT 266
N ++L ++ +LT G+AF ++G++I+ +GNG S++IF I+S LPAS FG+T
Sbjct: 121 NQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQT 179
Query: 267 VAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+D + ++ + +++S ILL +G +YV EA RKIPI YA + T++ G Q + YL
Sbjct: 180 AFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYL 238
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFF 383
P KVNS+GV+P+IF+ + LP TL F + A A NP + + I+LI F
Sbjct: 239 PLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILF 298
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA+++ P
Sbjct: 299 TYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILP 358
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 359 ILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYK 402
>gi|258422677|ref|ZP_05685582.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|417890904|ref|ZP_12534972.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|418283840|ref|ZP_12896577.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|418306861|ref|ZP_12918620.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|418560142|ref|ZP_13124664.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|418887466|ref|ZP_13441605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418992221|ref|ZP_13539866.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|257847088|gb|EEV71097.1| preprotein translocase, SecY subunit [Staphylococcus aureus A9635]
gi|341853782|gb|EGS94662.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21200]
gi|365165751|gb|EHM57500.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21202]
gi|365246252|gb|EHM86822.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21194]
gi|371972853|gb|EHO90222.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus 21252]
gi|377749538|gb|EHT73486.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG290]
gi|377756079|gb|EHT79976.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 430
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG++ +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQSAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|228919080|ref|ZP_04082459.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228956571|ref|ZP_04118367.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229077430|ref|ZP_04210081.1| Preprotein translocase subunit secY [Bacillus cereus Rock4-2]
gi|229107816|ref|ZP_04237452.1| Preprotein translocase subunit secY [Bacillus cereus Rock1-15]
gi|229125647|ref|ZP_04254679.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-Cer4]
gi|229142936|ref|ZP_04271377.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST24]
gi|229148539|ref|ZP_04276795.1| Preprotein translocase subunit secY [Bacillus cereus m1550]
gi|229176730|ref|ZP_04304134.1| Preprotein translocase subunit secY [Bacillus cereus 172560W]
gi|229188415|ref|ZP_04315463.1| Preprotein translocase subunit secY [Bacillus cereus ATCC 10876]
gi|228595089|gb|EEK52860.1| Preprotein translocase subunit secY [Bacillus cereus ATCC 10876]
gi|228606773|gb|EEK64190.1| Preprotein translocase subunit secY [Bacillus cereus 172560W]
gi|228634955|gb|EEK91528.1| Preprotein translocase subunit secY [Bacillus cereus m1550]
gi|228640557|gb|EEK96946.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST24]
gi|228657839|gb|EEL13645.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-Cer4]
gi|228675665|gb|EEL30873.1| Preprotein translocase subunit secY [Bacillus cereus Rock1-15]
gi|228705880|gb|EEL58215.1| Preprotein translocase subunit secY [Bacillus cereus Rock4-2]
gi|228803136|gb|EEM49958.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228840605|gb|EEM85867.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 425
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 242/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|415886259|ref|ZP_11548082.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
gi|387588912|gb|EIJ81233.1| preprotein translocase subunit SecY [Bacillus methanolicus MGA3]
Length = 431
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 247/426 (57%), Gaps = 32/426 (7%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G + K + L L + R+G +IP+ VN E DQ ++ L++F GG + I
Sbjct: 12 GEIRRKIIFTLLMLIVFRIGAFIPVPNVNAEVLKVQ-DQLNVFGVLNTFGGGALKNFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ- 201
++GI+P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ ++QA G
Sbjct: 71 AMGIMPYITASIIVQLLQMDVVPKFTEWSK-QGEVGRRKLAQFTRYFTIVLGLIQAFGMS 129
Query: 202 ---------VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+L + P ++ + L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 130 YGFNNMSRGMLIVDPGISTY-----LLIAIVLTAGTAFLMWLGEQITAKGVGNGISIIIF 184
Query: 253 TSIISYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
I++ +P++F + A+ ++ I + I+++ I L++G++++Q+A RKIPI
Sbjct: 185 AGIVAGIPSTFNQIYAQQLENSGEQLFLRIITVVLIVLAVIALIVGVIFIQQALRKIPIQ 244
Query: 307 YASRYTS-RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKA 361
YA+R + R+ +S +LP KVNS+GV+P+IF+ S + P T+A F G ++K
Sbjct: 245 YANRMVAGRNPVGGQSTHLPLKVNSAGVIPVIFAVSFIVTPPTIASFFGQNDVTLWIQKT 304
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
P G + + LI F Y+Y F+Q++P+ V+E LK+QG IP +RPGK+T +L
Sbjct: 305 FDYTKPIG---MICYVALIIAFTYFYAFIQVNPEQVAENLKKQGGYIPGIRPGKNTQEYL 361
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VL R+++ GS+FLA +A P Q L GTS+LI+VG A +T ++++A++
Sbjct: 362 TRVLYRLTLPGSLFLAFIAIMPVFFIQFAGLPHSAKIGGTSLLIVVGVALETMKQLEAQL 421
Query: 482 ISQKYK 487
+ + YK
Sbjct: 422 VKRHYK 427
>gi|229159303|ref|ZP_04287327.1| Preprotein translocase subunit secY [Bacillus cereus R309803]
gi|228624195|gb|EEK80997.1| Preprotein translocase subunit secY [Bacillus cereus R309803]
Length = 425
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 242/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPDHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|429331918|ref|ZP_19212658.1| preprotein translocase subunit SecY [Pseudomonas putida CSV86]
gi|428763429|gb|EKX85604.1| preprotein translocase subunit SecY [Pseudomonas putida CSV86]
Length = 443
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 251/423 (59%), Gaps = 25/423 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ GVN + QN ++LS + FSGG + R+ + +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGVNPDRLAELFRQNEGTILSLFNMFSGGALERMSVFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P+L+ L K+EGE+GR+K+ QYTRY +V A+VQA G + L
Sbjct: 82 MPYISASIIMQLMTAVSPQLEQL-KKEGESGRRKISQYTRYLTVILALVQATGMSIGLAG 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS + +V+ G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSAGFGFHFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A D N L I + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A ++ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQSIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 SAGIVFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYG 498
YG
Sbjct: 435 GYG 437
>gi|269104032|ref|ZP_06156729.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163930|gb|EEZ42426.1| preprotein translocase SecY subunit [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 441
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 246/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + +LG + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVLGAILIFRAGSFVPIPGIDAAVLADLFEQQKGTIIELFNMFSGGALSRASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + +V L G+ F ++GE+I++ +GNG SL+IFT I++ L
Sbjct: 138 GLPSMIPGLVVNPGLGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q ++ L +I ISF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIAVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQSENLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|392952496|ref|ZP_10318051.1| preprotein translocase subunit SecY [Hydrocarboniphaga effusa
AP103]
gi|391861458|gb|EIT71986.1| preprotein translocase subunit SecY [Hydrocarboniphaga effusa
AP103]
Length = 467
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 254/417 (60%), Gaps = 16/417 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G + G+ L LLG + + R+G +IP+ G++ + N Q S+L + FSGG + RL
Sbjct: 18 GEVRGRLLFLLGAIVVFRIGSFIPVPGIDPRQLEQLFNQTQGSILDMFNMFSGGALHRLS 77
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LG++P+I+A I+ QL+A + P+L++L K+EGE+GR+++ +YTRY ++ AI Q++G
Sbjct: 78 IFALGVMPYISASIIVQLMAAVVPQLKEL-KKEGESGRRQLTKYTRYGTLALAIFQSVGA 136
Query: 202 VLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L+ +N +V T+ L G+ F ++GE+I++ +GNG S++IF+ I++
Sbjct: 137 ATALQSSGVAINP-GFGFVFTATVSLVTGTMFLMWLGEQITERGIGNGMSMIIFSGIVAG 195
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYTSRSG 316
LP + G T A+ +G+ GL I++ ++ ++ G+V+V+ A+R+IP+++A R R
Sbjct: 196 LPPALGAT-AQLVSEGSVSGLVVIVVLALVALVTLGVVFVERAQRRIPVHHARRQQGRKL 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFY 372
++ +LP K+N +GV+P IF++S + P ++ RF G L++ A AL+PG + +
Sbjct: 255 FAAQTQHLPLKLNMAGVIPPIFASSIILFPASIVRFFGGEGGGGFLQQLANALSPGQALH 314
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+LI FF ++YT L D + +E LK+ GA IP VRPG TA ++ VL+R++V G
Sbjct: 315 GVLYAVLIIFFCFFYTALVFDSRETAENLKKSGAFIPGVRPGAQTARYIDQVLTRLTVAG 374
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
S+++ ++ P V + F GTS+LI V D ++QA ++S +Y+ +
Sbjct: 375 SIYITLVCLMPEVF--IAYWNVPMAFGGTSLLITVVVVMDFMAQLQAHLMSHQYEGL 429
>gi|395767203|ref|ZP_10447738.1| preprotein translocase, SecY subunit [Bartonella doshiae NCTC
12862]
gi|395414516|gb|EJF80958.1| preprotein translocase, SecY subunit [Bartonella doshiae NCTC
12862]
Length = 448
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 248/438 (56%), Gaps = 22/438 (5%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + +S
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALVVYRFGTYISLPGINIDALRQTFEHHSSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALESGIGTGLQIVIEPGVMFRISSVVTLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN----YIGLATIIISFILLVLGI 293
I+ +GNG SL+IFT I++ LP++F + + Q IG+ I IS I + I
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLIGIFLIAISVIGI---I 239
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+V+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 240 VFVERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFS 299
Query: 354 GIAA--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
L+ + +L G Y+ +L+AFF ++YT + +P D ++QLK+ IP +
Sbjct: 300 DKMPQWLQSISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGI 359
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG+ TA ++ VL+RI+V+G++++ ++ P + + + G GTS+LI+V
Sbjct: 360 RPGERTAEYIDYVLTRITVVGAIYIVLVCLLPEFMISALQVPFYLG--GTSLLIVVTVTI 417
Query: 472 DTARKVQAEIISQKYKNI 489
DT +VQ +++ +Y+ +
Sbjct: 418 DTVAQVQGHLVAHQYEGL 435
>gi|251793847|ref|YP_003008579.1| preprotein translocase subunit SecY [Aggregatibacter aphrophilus
NJ8700]
gi|422337195|ref|ZP_16418167.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
gi|247535246|gb|ACS98492.1| preprotein translocase, SecY subunit [Aggregatibacter aphrophilus
NJ8700]
gi|353345747|gb|EHB90038.1| preprotein translocase subunit secY [Aggregatibacter aphrophilus
F0387]
Length = 441
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 248/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKRRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLATVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I ++ + +V+V+ +R+I + YA R R G
Sbjct: 198 PAAIGQTIEQARLGQMHVLVLLLIAVTVFAVTYFVVFVERGQRRIKVEYAKRQQGRQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWGGQGSSLEWLTDLSMLLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYAAAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P V+ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 376 GLYVTFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|260893352|ref|YP_003239449.1| preprotein translocase subunit SecY [Ammonifex degensii KC4]
gi|260865493|gb|ACX52599.1| preprotein translocase, SecY subunit [Ammonifex degensii KC4]
Length = 419
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 229/390 (58%), Gaps = 6/390 (1%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLG +IP+ GVN + ++ + D SGG I ++ IVP+IN+ I+ QLL
Sbjct: 29 RLGAHIPVPGVNPQEVARLIESGLIFGFFDVISGGAFKSFSIFAMSIVPYINSSIIMQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ P+L+ L K EGE GR+K+++YTRY +V A +QA+G YLR + L
Sbjct: 89 TVVIPRLEQLAK-EGEEGRRKIVEYTRYGTVILAFIQALGMTAYLRHALLHPGLGSYLVV 147
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIG 278
LT G+ F ++GE+I++ +GNG SLLIF I+S +PA R ++ Q G ++
Sbjct: 148 AISLTAGTVFLMWLGEQITEKGIGNGISLLIFAGIVSRIPAGGARLISY-LQAGTISWFN 206
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
+ +++ L++ GIV + EA+R+IP+ Y R R +S +LP ++N +GV+P+IF
Sbjct: 207 ILVLLVIGALVIAGIVAMNEAQRRIPVQYPKRIVGRRVYGGQSTHLPLRINMAGVIPVIF 266
Query: 339 STSSLALPGTLA-RFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDV 397
++S L LP +A F G + G ++ LLI F Y+YT + ++P D+
Sbjct: 267 ASSLLFLPEQIAGWFKGHPVADWFLRVFHWGSFWHTFIYALLIIGFTYFYTAVIMNPLDI 326
Query: 398 SEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG 457
++ LK+ G IP +RPG+ TA ++ V+SRI+++G+VFLA++A P + T +
Sbjct: 327 ADNLKKYGGFIPGIRPGRPTAEYISRVMSRITLVGAVFLALIAILPNFVLLVTRIPNVY- 385
Query: 458 FAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A +T ++++A ++ + Y+
Sbjct: 386 FGGTALLIVVGVALETMKQLEAHLLMRSYQ 415
>gi|228912869|ref|ZP_04076516.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925383|ref|ZP_04088479.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931632|ref|ZP_04094538.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943935|ref|ZP_04106320.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983385|ref|ZP_04143598.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229136976|ref|ZP_04265603.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST26]
gi|386733996|ref|YP_006207177.1| preprotein translocase subunit SecY [Bacillus anthracis str. H9401]
gi|228646514|gb|EEL02721.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST26]
gi|228776375|gb|EEM24728.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815768|gb|EEM62004.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828060|gb|EEM73788.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834305|gb|EEM79846.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846805|gb|EEM91810.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|384383848|gb|AFH81509.1| Preprotein translocase secY subunit [Bacillus anthracis str. H9401]
Length = 425
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 242/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWAK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|387769776|ref|ZP_10125973.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
gi|386905946|gb|EIJ70696.1| preprotein translocase, SecY subunit [Pasteurella bettyae CCUG
2042]
Length = 441
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/416 (33%), Positives = 249/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L G+ L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKGRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L +L K+EGE+GR+K+ +YTRYA++G A +QAIG
Sbjct: 79 ALGIMPYISASIIIQLLTTVYPALNEL-KKEGESGRRKISKYTRYATLGLATLQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A Q ++ + +I + V +V+ + +R+I + YA R R G
Sbjct: 198 PAAIGQTIEQARQGQMHLLVLLLIAVVVFAVTYFVVFFERGQRRIKVEYAKRQQGRQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGQGSSLEWLTDLSMLLSPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LIVYAIAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 376 GLYITFVCLVPYIMMSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|345858444|ref|ZP_08810837.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
gi|344328463|gb|EGW39848.1| preprotein translocase, SecY subunit [Desulfosporosinus sp. OT]
Length = 428
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 240/414 (57%), Gaps = 24/414 (5%)
Query: 92 KLLGYLALS----RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
K +GY L R+G +IP+ ++ + L + +D+ SGG RL + +L I
Sbjct: 17 KKIGYTLLMFLIFRIGAHIPIPFIDHDTLKKMLGTGGMFDFMDTLSGGSFKRLSVFALSI 76
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P++ A I+ QLL + P L+ L K EG+ GRKK+ QYTRY++VG +QA G +R
Sbjct: 77 TPYVTASIILQLLTIVIPSLERLSK-EGDYGRKKITQYTRYSTVGLGFIQAFGLTYGVRG 135
Query: 208 YVNDFST--DW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+N S W L +LT G+AF ++GE I++ +GNG SL+IF I+S +P +
Sbjct: 136 ALNIPSPALKWPIYLLVALVLTAGTAFLMWLGEAITEKGIGNGISLIIFAGIVSRVPDAI 195
Query: 264 GRTVAEAFQDG-----NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+++ + G + IGLA +++ + G++YVQE R++ + YA R R
Sbjct: 196 -KSLWNMLRVGEINAFSVIGLALLVV---FITAGVIYVQEGTRRVSVQYAKRVVGRRVYG 251
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSF----YL 373
+S+++P KVN +GV+P+IF+ S LA P T+A + +A + + GS YL
Sbjct: 252 GQSSHIPLKVNQAGVIPVIFAISLLAFPQTIATWIPTSAFARFVNTWFSMNGSITSIPYL 311
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+LI FF Y+YT + +P DV++ LK+ G IP +RPG+ TA +L +LSRI++ G
Sbjct: 312 LVYGVLIIFFTYFYTAVTFNPVDVADNLKKYGGFIPGLRPGRPTAEYLSKILSRITLAGG 371
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA++A P ++ T L F GTS+LI+VG A +T ++++++++S+ Y+
Sbjct: 372 LFLALIAVLPTLVIGLTGLKNIY-FGGTSLLIVVGVALETMKQIESQLMSRHYQ 424
>gi|154253197|ref|YP_001414021.1| preprotein translocase subunit SecY [Parvibaculum lavamentivorans
DS-1]
gi|154157147|gb|ABS64364.1| preprotein translocase, SecY subunit [Parvibaculum lavamentivorans
DS-1]
Length = 443
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 247/436 (56%), Gaps = 21/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++F F K L + LG L + RLG Y+PL G++ A V + Q+
Sbjct: 4 AAEQLAANLNFAAFSKATELKKRIWFTLGALIVYRLGTYVPLPGIDPSALAQVFSQQQSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
LL D F+GG IGR+ I +L I+P+I+A I+ QL+ ++P L L K+EGE GRK++ Q
Sbjct: 64 LLGVFDMFAGGAIGRMAIFALAIMPYISASIIIQLMTTVSPHLAQL-KKEGEQGRKQINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVN---DFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A +Q G + L N D + +T+V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVVLATLQGYGIAVGLEGAQNVVIDPGIFFRITTVITLVGGTVFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISF-----ILLVLGIVYV 296
+GNG SL+IF I++ LP R +A + G L+T II F +++++ IV+V
Sbjct: 183 GVGNGISLIIFAGIVAELP----RALAGTLELGRQGALSTAIILFLAVMVVIVIMAIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT--- 353
+ A+R++ + Y R S++LP K+N++GV+P IF++S L LP T+A FT
Sbjct: 239 ERAQRRLLVQYPKRQVGNKLYGGDSSHLPLKLNTAGVIPPIFASSLLLLPVTIANFTSGQ 298
Query: 354 GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
G L L G Y+ I FF ++YT + +P D ++ LK+ G IP +RP
Sbjct: 299 GPDWLNSVTALLGHGQPLYMAFYAAGIIFFAFFYTAIVFNPQDTADNLKKYGGFIPGIRP 358
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TA ++ VL+R++ +G+++L I+ P ++ + + F GTS+LI+V DT
Sbjct: 359 GQRTAEYIDYVLTRLTAVGAIYLTIVCLLPELLISQYSVPFY--FGGTSLLIVVSVTMDT 416
Query: 474 ARKVQAEIISQKYKNI 489
++Q+ +++ +Y+ +
Sbjct: 417 VSQIQSHLLAHQYEGL 432
>gi|410610657|ref|ZP_11321771.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
gi|410634578|ref|ZP_11345212.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410145782|dbj|GAC22079.1| preprotein translocase subunit SecY [Glaciecola arctica BSs20135]
gi|410169793|dbj|GAC35660.1| preprotein translocase subunit SecY [Glaciecola psychrophila 170]
Length = 439
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 247/420 (58%), Gaps = 24/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDAAVLAQLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG--- 200
+LGI+P+I A I+ QL++ ++P + +L K+EGEAGR+K+ QYTRY ++ A QA+G
Sbjct: 77 ALGIMPYITASIIIQLMSHMHPPMMEL-KKEGEAGRRKISQYTRYFTLVLASFQAVGIAT 135
Query: 201 ------QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
Q L + P + T W+ +L+T G+ F ++GE+I++ +GNG S+LIF
Sbjct: 136 NLPNLIQGLVINPGFGFYFTAWI----SLVT-GTMFLMWLGEQITERGIGNGISILIFAG 190
Query: 255 IISYLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I+S LP++ G +A Q + N + L + + I + +V+V+ +R+I +NYA R
Sbjct: 191 IVSGLPSALGNVAEQARQGELNLLFLMLVGVIIIAVTYFVVFVERGQRRIVVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGG 369
R +S +LP KVN +GV+P IF++S + PGT+A + G ++ L+ A+ L+PG
Sbjct: 251 RKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIANWFGQNESLSWLQDVALQLSPGQ 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R++
Sbjct: 311 PLYVMLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSKYVDKVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 371 LAGALYITFICLVPEFMLIAWNVPFY--FGGTSLLIMVVVIMDFMAQVQTHLMSNQYESV 428
>gi|85715111|ref|ZP_01046095.1| preprotein translocase SecY [Nitrobacter sp. Nb-311A]
gi|85698026|gb|EAQ35899.1| preprotein translocase SecY [Nitrobacter sp. Nb-311A]
Length = 443
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++F F K L + LG L + RLG YIPL G++ + V N
Sbjct: 4 AAEQLAANLNFSAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWQKVFNSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGGGI R+ I +L I+P+I+A I+ QLL ++PKL+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFSGGGIDRMAIFALNIMPYISAAIILQLLTSVSPKLEAL-KKEGEAGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L+ N + +++++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAFFQSYGIAVGLQGAGNVVTNPGMFFLVSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I I++ LP++ + Q G+ I++ ++ V+ IV+++ A+
Sbjct: 183 GIGNGISLIIMAGIVAELPSALANMLELGRQGALSTGIILIVLIMVVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFDGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L I LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWINTQLGHGRPLFLVLYIALIVFFTFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+V G+V+LA++ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVPGAVYLAVVCLIPEILISYAAVPFY--FGGTSLLIVVSVTMDTVSQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|340028932|ref|ZP_08664995.1| preprotein translocase subunit SecY [Paracoccus sp. TRP]
Length = 454
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 230/408 (56%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIP+ G++ A +DQ L L F+GG +GR+GI +LGI+P+I
Sbjct: 31 LGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGLGGILSMFTGGALGRMGIFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QLLA + P L+ L K+EGE GRKK+ QYTRY +V A+ QA G + L
Sbjct: 91 SASIIVQLLASMVPALEQL-KKEGEQGRKKINQYTRYGTVALALFQAWGLAVSLEHGNLA 149
Query: 212 FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
+ ++TL G+ F ++GE+I+ +GNG SL+IF I++ +PA + +A+
Sbjct: 150 HEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPAHLAQFLAQ 209
Query: 270 ----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
A +G+ ++ + I V V+++ A RKI I Y R +S++LP
Sbjct: 210 GRSGAISTPVILGVIVMVAAVIAFV---VFMERALRKIHIQYPRRQVGMKIYDGQSSHLP 266
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSFYLPTNILLIAF 382
KVN +GV+P IF++S L LP T++ F+G + PG YL LI F
Sbjct: 267 IKVNPAGVIPAIFASSLLLLPVTISTFSGNQTGPIMSTILAYFGPGQPLYLLFFAALIVF 326
Query: 383 FNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
F Y+YTF + +DV+E LK QG IP +RPGK T +L V++R+ V+GS +L +
Sbjct: 327 FTYFYTFNVSFKTEDVAENLKNQGGFIPGIRPGKRTEDYLTYVVTRVLVIGSAYLTFVCL 386
Query: 442 GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P VI + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 387 LPEVIRNQLAIPFY--FGGTSVLIVVSVVMDTINQVQSHLLAHQYEGL 432
>gi|240948155|ref|ZP_04752558.1| preprotein translocase subunit SecY [Actinobacillus minor NM305]
gi|240297508|gb|EER48015.1| preprotein translocase subunit SecY [Actinobacillus minor NM305]
Length = 441
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 250/419 (59%), Gaps = 17/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L ++ + + +T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SVALPNMLSGLVPNPNMLFYITAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ EA Q G L ++I+ I + +V+V+ +R+I ++YASR R
Sbjct: 195 DLPATIGQTIEEARQ-GEISFLVLLLIAVIAFAVTYFVVFVERGQRRIVVHYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-----TGIAALKKAAVALNPGGS 370
R+++LP KVN +GV+P IF++S + P ++ ++ G+ L + L PG
Sbjct: 254 MAPARTSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSSEGVEWLFDLSQLLQPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R+++
Sbjct: 314 LYIVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+G++++ + P +I + G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 IGALYITFVCLVPYIITSLWKVPFQLG--GTSLLIVVVVIMDFIAQVQSHMMSLQYDSV 430
>gi|375264306|ref|YP_005021749.1| preprotein translocase subunit SecY [Vibrio sp. EJY3]
gi|369839630|gb|AEX20774.1| preprotein translocase subunit SecY [Vibrio sp. EJY3]
Length = 444
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 246/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ DQ +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLAELFDQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQD--GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G+T+ +A Q + L ++SF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLSFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGS 370
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 257 AAQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQP 316
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTL 376
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 377 AGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYDSV 433
>gi|403530672|ref|YP_006665201.1| preprotein translocase subunit SecY [Bartonella quintana RM-11]
gi|403232743|gb|AFR26486.1| preprotein translocase subunit SecY [Bartonella quintana RM-11]
Length = 448
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S++ FG F + L + LG L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNMSFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLESL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A++QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAVLQAFGIAVALETGIGIGLKIVVEPGFMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYV 296
I+ +GNG SL+IFT I++ LP++F + + Q L TII+ + V+ IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLTIIVLIAISVIAVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQIFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ +L+AFF ++YT + +P+D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAVSYSLGHGQPLYMIIYAILMAFFCFFYTAIVFNPNDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P I + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFIISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|365896275|ref|ZP_09434357.1| Preprotein translocase secY subunit [Bradyrhizobium sp. STM 3843]
gi|365422988|emb|CCE06899.1| Preprotein translocase secY subunit [Bradyrhizobium sp. STM 3843]
Length = 444
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++I+ GDF K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANINLGDFAKNEELKKRIWFTLGALLVYRLGTYIPLPGIDPAIWDSVFRTQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKTLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAVQSYGIAVGLEGAGNVVSDPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q G+ ++I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGAMSTGVILLVIIMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGRGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLILYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+V+G+++LAI+ P ++ + + F GTS+LI+V DT ++
Sbjct: 363 AEYIDYVLSRITVIGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQI 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|164686547|ref|ZP_02210575.1| hypothetical protein CLOBAR_00114 [Clostridium bartlettii DSM
16795]
gi|164604416|gb|EDQ97881.1| preprotein translocase, SecY subunit [Clostridium bartlettii DSM
16795]
Length = 422
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 236/409 (57%), Gaps = 17/409 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L L + + R+G IP+ GV+ + NSLL+ + F+GG + +LGI
Sbjct: 17 RILYTLMMILIFRIGTTIPVPGVDTSIISKLVSGNSLLALYNMFTGGAFSNFTLFALGIG 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRP 207
P+I A I+ QLL L++LQK GE GRKK+ YTRY ++ AI+QA+G L ++
Sbjct: 77 PYITASIIIQLLTVGFESLKELQK-SGEEGRKKMNMYTRYTALVLAIIQAVGITLGVVKG 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+ + ++ T + L S ++G+RI++ LGNG+S++IF IIS +P +V
Sbjct: 136 ALKSDNIFFITTVIITLIAASMILMWMGDRITEKGLGNGSSIIIFVGIISRIPTDI-ISV 194
Query: 268 AEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS--GGLQRSAY 323
+ Q G II++ I+L+ + ++ EA RKIP+ YA + R GG ++++
Sbjct: 195 VNSVQSGTIKLWLVIILAIIMLITITLVTFINEAVRKIPVQYAKKVVGRKLYGG--QNSH 252
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF----YLPTNILL 379
+P KVN SGVMPIIF++S LA P T+A F G A + L+ G Y +LL
Sbjct: 253 IPMKVNQSGVMPIIFASSLLAFPQTIALFMGENAQNFVSTYLSTSGDIGFWIYRSLEVLL 312
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF+Y+YT + + DD++E +K G IP +RPG+ T +L +LSRI++ G++FLA++
Sbjct: 313 IVFFSYFYTTISFNVDDIAENMKNNGGFIPGIRPGRPTIDYLSRILSRITLAGALFLAVI 372
Query: 440 AAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A PA T H + AGTS+LI+VG A + R++++ ++ + Y+
Sbjct: 373 AMIPAF---TVHFMSVNMSLAGTSILIVVGVALELKRQLESHLVMRSYQ 418
>gi|163745564|ref|ZP_02152924.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
gi|161382382|gb|EDQ06791.1| protein translocase subunit SecY [Oceanibulbus indolifex HEL-45]
Length = 460
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 241/418 (57%), Gaps = 20/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++ + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDGGALRDFMESAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTRY +V A +Q+ G +
Sbjct: 83 ALGIMPYISASIIVQLLTSMVPALEQL-KKEGEQGRKKINQYTRYGTVALATLQSYGLAV 141
Query: 204 YLRP--YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L+ V D + + ++TL G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLQAGDIVADGQMGFGFIAACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 201
Query: 260 PASFGRTVAE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
PA+ + A A IG+ ++I+ I+ V V+++ A RKI I Y R
Sbjct: 202 PAAIAQFFASGRSGAISPAVIIGVLVMVIATIMFV---VFMERALRKIHIQYPRRQVGMK 258
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---ALKKAAVALNPGGSFY 372
+++LP KVN +GV+P IF++S L LP T++ F+G + + PG Y
Sbjct: 259 MYDGGTSHLPVKVNPAGVIPAIFASSLLLLPVTVSTFSGNSTSPVMSWLLANFGPGQPLY 318
Query: 373 LPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
L + +I FF Y+YTF + PDDV++ LK Q +P +RPGK TA +L+ V++RI VL
Sbjct: 319 LLFFVAMIVFFAYFYTFNVSFKPDDVADNLKNQNGFVPGIRPGKRTAEYLEYVVNRILVL 378
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS +LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 379 GSFYLAAVCVLPEILRGQFAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 434
>gi|257125056|ref|YP_003163170.1| preprotein translocase subunit SecY [Leptotrichia buccalis
C-1013-b]
gi|257048995|gb|ACV38179.1| preprotein translocase, SecY subunit [Leptotrichia buccalis
C-1013-b]
Length = 435
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 238/411 (57%), Gaps = 32/411 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
+ ++R+GI+I + G+N EAF N++ L+ FSGG + R I +LGIVP+INA IV
Sbjct: 31 IMVARVGIHIAVPGINTEAFKNFQQGNAIAQFLNLFSGGAVERASIFALGIVPYINASIV 90
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-------QVLYLRPYV 209
FQLL I PK+ ++QK EG R K+ Q++RY ++ AI+Q+ G Q L L P
Sbjct: 91 FQLLGVIFPKIDEMQK-EGGKERDKITQWSRYVTIVLAIIQSFGIAVLMQNQGLVLEP-- 147
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
++L++V L+T G++F +I ERIS +GNGTS+LIF +I++ LP TV
Sbjct: 148 ---GPKFILSTVVLITGGTSFLMWISERISIRGIGNGTSMLIFLNIVAGLP-----TVIS 199
Query: 270 AFQDGNYIGLATI-----IISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ----R 320
A G G+ + I++F++ + +V VQ AER+IPI YA + + GG Q +
Sbjct: 200 AMYTGLPSGMGKVLLGLSIVAFVVFIALMVIVQLAERRIPIQYAGKGSLGFGGGQSTVGK 259
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILL 379
YLP K+N SGVMPIIF++ +A P L LK A P G+FYL +L
Sbjct: 260 RTYLPLKINMSGVMPIIFASVLMAAPPFLVSMLKAGTLKNFLAAQFEPKGAFYLLLFAIL 319
Query: 380 IAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
I F+++YT + DPD V++ LK+ G +IP VR GK TA +L+ V +R++ ++FL++
Sbjct: 320 ITVFSFFYTLTIAFDPDKVADDLKQSGGTIPTVRAGKETADYLEKVATRVTFGSAIFLSL 379
Query: 439 LAAGPAV-IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
L P + L G GTS+LILVG A + ++ + + ++ K+
Sbjct: 380 LGIMPNIWFGYVLKLPVMLG--GTSLLILVGTAVELLLQIDSYLAVKQMKS 428
>gi|392961470|ref|ZP_10326928.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|421056292|ref|ZP_15519219.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|421058296|ref|ZP_15521008.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
gi|421064602|ref|ZP_15526463.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|421072729|ref|ZP_15533833.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392438708|gb|EIW16531.1| preprotein translocase, SecY subunit [Pelosinus fermentans B4]
gi|392445156|gb|EIW22488.1| preprotein translocase, SecY subunit [Pelosinus fermentans A11]
gi|392453727|gb|EIW30590.1| preprotein translocase, SecY subunit [Pelosinus fermentans DSM
17108]
gi|392460762|gb|EIW37024.1| preprotein translocase, SecY subunit [Pelosinus fermentans A12]
gi|392461105|gb|EIW37333.1| preprotein translocase, SecY subunit [Pelosinus fermentans B3]
Length = 418
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 219/391 (56%), Gaps = 9/391 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R G +IP+ GV+ +L LD FSGG + + I ++ I P+INA I+ QL+
Sbjct: 29 RAGTHIPVPGVDVSVIEQMFTSGNLFGLLDLFSGGALSKFSIFAMSITPYINASIIMQLI 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTS 220
+ P + K EGE GRKK+ Q TRY +V +QAIG + L+ + + L
Sbjct: 89 TIVVPTFEQWSK-EGEEGRKKLTQITRYGTVLLGFIQAIGMAIGLKAAIINPGIASTLLI 147
Query: 221 VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS----FGRTVAEAFQDGNY 276
LT G+ F ++GE+I++ +GNG SL+IF I+S LP + A N
Sbjct: 148 ALTLTAGTTFLMWLGEQITEKGIGNGISLIIFAGIVSRLPDGLYMLYEYLTAGTINIFNV 207
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ A I ++ I+LV+ I + +R+IP+ YA R R S ++P KVN +GV+PI
Sbjct: 208 LLFAIIALAMIVLVIAI---TQGQRRIPVQYAKRVVGRKTYGGHSTHIPLKVNQAGVIPI 264
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDD 396
IF++S L P T+A+F IA +K A G LLI FF Y+YT + L+ D
Sbjct: 265 IFASSVLMFPVTIAQFVDIAWVKTVAGWFAWGTPLQTFLYALLIIFFTYFYTAVTLNISD 324
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
++E +K+ G IP +RPGK TA +L V++RI++ GS+FLA +A P I T++
Sbjct: 325 MAENMKKYGGFIPGLRPGKPTADYLDRVMTRITLAGSIFLAGIAILPNFIAAVTNIPGLN 384
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT ++++A ++ + Y+
Sbjct: 385 -FGGTALLIVVGVALDTMKQIEAIVLMRHYQ 414
>gi|260770933|ref|ZP_05879862.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|375129807|ref|YP_004991905.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
gi|260614170|gb|EEX39360.1| preprotein translocase SecY subunit [Vibrio furnissii CIP 102972]
gi|315178979|gb|ADT85893.1| preprotein translocase subunit SecY [Vibrio furnissii NCTC 11218]
Length = 444
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 246/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVVGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIIEMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+T+ +A Q ++ L +I ++F ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVVAFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGS 370
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQP 316
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTL 376
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 AGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSNQYESV 433
>gi|441505666|ref|ZP_20987647.1| Preprotein translocase secY subunit [Photobacterium sp. AK15]
gi|441426657|gb|ELR64138.1| Preprotein translocase secY subunit [Photobacterium sp. AK15]
Length = 441
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 247/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L L+G + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKTRLLFLIGAILIFRAGSFVPIPGIDAAVLADLFEQQKGTVIELFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGESGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + +V L G+ F ++GE+I++ +GNG S++IFT I++ L
Sbjct: 138 GLPSMIPGLVVNPGLGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISMIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q ++ L +I ISF ++ +V+V+ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIAVISFAVIYF-VVFVERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKLNMAGVIPAIFASSIILFPGTLAQWFGQNENLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|374309543|ref|YP_005055973.1| preprotein translocase subunit SecY [Granulicella mallensis
MP5ACTX8]
gi|358751553|gb|AEU34943.1| preprotein translocase, SecY subunit [Granulicella mallensis
MP5ACTX8]
Length = 470
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 237/439 (53%), Gaps = 50/439 (11%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG LA+ RLG +IP G+N + +QNS L LD F+GG + + I +LGI+P+I
Sbjct: 22 LGMLAIYRLGGHIPTPGINADMVAQFFNQNSGSALGLLDLFNGGNLRKATIFALGIMPYI 81
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL------ 205
A I+FQLL I L LQK EGE GR+K+ Q+TRY +V A+VQ+ L L
Sbjct: 82 TASIIFQLLTVIYEPLAKLQK-EGELGRRKITQWTRYVTVVLAVVQSFFIALTLTSTQAG 140
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ VN ++ V LT G+AF ++GE+I++ +GNG SLLIFT I+ LP R
Sbjct: 141 QSMVNVSRGQFIPLCVITLTCGTAFIMWLGEQITERGIGNGMSLLIFTGIVVGLP----R 196
Query: 266 TVAEAFQDGNY--------IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
+ + +Q + I + II I +V IV+V+ +ER+IPI A R R
Sbjct: 197 GIEDLYQKAHTAVWGGFTPIAIGLIIAMMIAVVAFIVFVERSERRIPIQSAKRMVGRRMA 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL--ARFTGIAALKKAA------VALNPGG 369
S++LP KVNS GVMP+IF++S L+ P L G L+ L P
Sbjct: 257 APDSSFLPLKVNSGGVMPVIFASSILSFPLLLQGVSLFGSGPLRDNKYFGPIFTNLAPSE 316
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
+Y I I FF Y+Y + PDD+++ +++ G+ IP +RPGK T+ F+ VL+RI+
Sbjct: 317 PWYEVLYIAAIIFFAYFYISIIFRPDDIADNMRKYGSFIPGIRPGKRTSDFINDVLTRIT 376
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFR---------------------GFAGTSVLILVG 468
++G+++L I++ P ++ H F GTS+LI+VG
Sbjct: 377 LVGAIYLVIISIIPTLLISGIHFNHLWLVGKFFDTLPSWTTNGLGVNFYFGGTSLLIVVG 436
Query: 469 CATDTARKVQAEIISQKYK 487
A DT +++++++I + Y+
Sbjct: 437 VAMDTVQQIESQLIMRHYE 455
>gi|407010032|gb|EKE25040.1| hypothetical protein ACD_5C00316G0003 [uncultured bacterium]
Length = 423
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 235/417 (56%), Gaps = 24/417 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L +LG L + R+ +PL GV+ E + N L L+ FSGGG+ + I L
Sbjct: 14 LRNKILFILGILVVFRIAANVPLPGVDMEQLRRLFEGNQFLGMLNVFSGGGLTNISIVML 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G+ P+I A I+ QLL I P+++ + K EGEAGR+K +TR+ +V A +Q V L
Sbjct: 74 GVGPYITASIIMQLLTMIVPRVEQIYKEEGEAGRQKFNMWTRWLTVPLAALQTFSMVALL 133
Query: 206 RP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
R + ST + V + T G+ F ++GE I++ +GNG SL+IF I+S LP+
Sbjct: 134 RSQGVLQVTSTFDIAMIVVIATAGTVFLMWLGELITEKGIGNGVSLIIFAGIVSGLPSGI 193
Query: 264 GRTVA--EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
+ ++ Q YIGL + ++ + G+V V E +R IP++YA R S
Sbjct: 194 SKLFLTFDSTQIFTYIGLIAVT---VITIAGVVMVTEGQRNIPVSYAKRIRGDKTYGGAS 250
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS----------- 370
++LP +VN +GV+PIIF+ S + PG +A F L KA+ A G+
Sbjct: 251 SHLPLRVNQAGVIPIIFAMSIMLFPGMIATF-----LMKASNATIANGATFVNNLFQNQV 305
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
FY +LI F Y+YT + DP +SE L++QG IP +RPGK+TA +L +++RI++
Sbjct: 306 FYSSLYFILIVLFTYFYTAVVFDPVKISENLQKQGGYIPGIRPGKTTADYLYKIMNRITL 365
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G++FL ++A P +++ + + + + GTS+LI+V +T ++++++++ + Y+
Sbjct: 366 TGALFLGLIAVLPFIVQGLSGIQSLQ-VGGTSILIVVSVVIETIKQIESQLVMRDYE 421
>gi|406994564|gb|EKE13545.1| hypothetical protein ACD_13C00010G0031 [uncultured bacterium]
Length = 426
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 239/416 (57%), Gaps = 15/416 (3%)
Query: 82 FKGPLPGKFLKLLGY-LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
FK P K L + G L + RL +IP G++R+ + LLS LD FSGG +
Sbjct: 13 FKTPSIRKKLLITGLILVVFRLAAHIPAAGIDRDTLQALFSGSPLLSLLDVFSGGTLANF 72
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I +LG+ P+INA I FQLL + P +Q+LQK EGE G++K+ QYTR +V A +QA G
Sbjct: 73 SILALGLNPYINASIFFQLLGYVVPSIQELQK-EGEYGQEKINQYTRLLTVPLAALQAFG 131
Query: 201 QVLYLR--PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L+ + D S +L+ V +T G+ F ++GE IS+ NG SLLIF I++
Sbjct: 132 MYALLKGQNIIPDLSPVALLSLVVTMTAGTIFAVWLGELISEYGFKNGVSLLIFVGIVAR 191
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
LP + G++V+ FQ + + I+ +L+V +V EA R+IPI+YA R T GL
Sbjct: 192 LPITLGQSVS-IFQSQDILKTIIFILVIVLIVGLVVLFGEATRQIPIHYAKRRTQS--GL 248
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA-------VALNPGGSF 371
S+YLP ++N +GV+PIIF+ S + +P +++F +K A N G
Sbjct: 249 VASSYLPIRLNQAGVIPIIFAVSLVLMPSMISQFLASVPNEKIANFAIGVSANFNSGTLL 308
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y L++ F Y+YT + +P+ +SE L++ G IP +RPGK T +L VLSRI+V+
Sbjct: 309 YNVVYFLMVFGFTYFYTAVVFNPEKISEDLQKGGGFIPGIRPGKETEKYLSHVLSRITVV 368
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G VFL ++A P++ +++ + GTS+LI+V + R+++ E++ ++Y+
Sbjct: 369 GGVFLGLIAVLPSLFQKSLGASNL-AIGGTSILIVVSVVLEIIREIEGELVMERYE 423
>gi|343501434|ref|ZP_08739311.1| preprotein translocase subunit SecY [Vibrio tubiashii ATCC 19109]
gi|418477131|ref|ZP_13046266.1| preprotein translocase subunit SecY [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342818295|gb|EGU53163.1| preprotein translocase subunit SecY [Vibrio tubiashii ATCC 19109]
gi|384575215|gb|EIF05667.1| preprotein translocase subunit SecY [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 444
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ DQ +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLAELFDQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIGVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|312884683|ref|ZP_07744384.1| preprotein translocase subunit SecY [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367596|gb|EFP95147.1| preprotein translocase subunit SecY [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 444
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ GV+ DQ +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGVDAAVLADLFDQQAGTIVDMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A +QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATLQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVENLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A + D + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIDQAKRGDLHVLLLLLIAVLSFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQGGQSSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMAAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|148260919|ref|YP_001235046.1| preprotein translocase subunit SecY [Acidiphilium cryptum JF-5]
gi|326404317|ref|YP_004284399.1| preprotein translocase subunit SecY [Acidiphilium multivorum
AIU301]
gi|338989205|ref|ZP_08634076.1| Preprotein translocase, SecY subunit [Acidiphilium sp. PM]
gi|146402600|gb|ABQ31127.1| protein translocase subunit secY/sec61 alpha [Acidiphilium cryptum
JF-5]
gi|325051179|dbj|BAJ81517.1| preprotein translocase SecY subunit [Acidiphilium multivorum
AIU301]
gi|338205892|gb|EGO94157.1| Preprotein translocase, SecY subunit [Acidiphilium sp. PM]
Length = 449
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 241/413 (58%), Gaps = 22/413 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIP+ GV+ L QN +L + FSGG +GR+ + +L I+P+I
Sbjct: 31 LGALIVFRLGTYIPIPGVDPTVMEHMLAQNGGGILGMFNMFSGGALGRMTVFALNIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----- 206
+A I+ QLL P+L+ L K+EG+ G++K+ QYTRY +V A+ Q+ G + L
Sbjct: 91 SASIIMQLLQAAVPQLEAL-KKEGQTGQQKINQYTRYLTVLIALAQSYGIAIGLESITST 149
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V D +++T+V LT GS F ++GE+I+ +GNG+SL+IF I++ LP +
Sbjct: 150 VGPAVLDPGLFFIVTTVITLTGGSVFLMWVGEQITSRGIGNGSSLIIFAGIVAALPGA-- 207
Query: 265 RTVAEAFQDGNYIGLAT-IIISFILLVLGIV----YVQEAERKIPINYASRYTSRSGGLQ 319
+A Q G GL+T +I F +L L +V +++ A+RK+ I Y R
Sbjct: 208 --IASVLQLGASGGLSTGFVIGFFVLSLAVVAFVVFMERAQRKVLIQYPKRQVGNRMFGG 265
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTN 376
S++LP KVN+SGV+P IF++S L +P T+ F TG L+ A L+ G Y+
Sbjct: 266 DSSHLPMKVNTSGVIPPIFASSLLLIPATVIGFSHGTGPGWLQLLARELSNGQPGYMLLY 325
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LI FF+Y+YT + +P++ ++ LK+ G +P +RPG +TA + TVL+R++ +G+ +L
Sbjct: 326 AGLIIFFSYFYTAVVFNPEETADNLKKYGGFVPGIRPGANTAKYFDTVLTRLTTIGAAYL 385
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
I+ P + L A F GTS+LI+V DT ++Q+ +++ +Y+ +
Sbjct: 386 VIVCLIPQFLIGQFDLAAGYYFGGTSLLIVVSVTMDTVAQIQSHLLAHQYEGL 438
>gi|328953138|ref|YP_004370472.1| preprotein translocase subunit SecY [Desulfobacca acetoxidans DSM
11109]
gi|328453462|gb|AEB09291.1| preprotein translocase, SecY subunit [Desulfobacca acetoxidans DSM
11109]
Length = 437
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 245/404 (60%), Gaps = 15/404 (3%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ R+G +IP G++ +A + ++ ++ D FSGG + RL + +LGI+P+I+A
Sbjct: 25 LAVYRIGCHIPTPGIDADALMSFFARHRGTIFGLFDMFSGGALERLSVFALGIMPYISAS 84
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------- 206
I+ +L+ + P L L K EGEAG+KK+ QYTRY +V + +Q +G + L
Sbjct: 85 IIMELMKVVIPALDKLYK-EGEAGQKKIKQYTRYGTVILSAIQGLGISMGLEGMGMESGG 143
Query: 207 -PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P V + L +V LT G+AF ++GE+I++ +GNG SL+IF I++ +P++
Sbjct: 144 VPVVLHPGWAFRLMTVLTLTSGTAFIMWLGEQITERGIGNGISLIIFAGIVARMPSAIIN 203
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
T+ I L +I+ ++ V+G IV+++ +R+IP+ YA R R ++ +L
Sbjct: 204 TMQLVKTGEIGIILIFLIMILMIAVVGFIVFMERGQRRIPVQYARRVVGRRMYGGQTTHL 263
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P KVNS+GV+P IF++S L P T+A F + +++A ++PG + ++ I FF
Sbjct: 264 PLKVNSAGVIPPIFASSILMFPATIATFINVDWVRRATELISPGALIHEILYVIFIIFFC 323
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + +P DV+E +K+ G IP +RPGK T+ +++ +LSRI++ G+++++ + P
Sbjct: 324 YFYTAVTFNPVDVAENMKKYGGYIPGLRPGKPTSDYIERILSRITLGGALYVSFVCVMPT 383
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
V+ Q ++ + F GT++LI+VG A DT ++++ ++++ Y+
Sbjct: 384 VLVQRFNVPFY--FGGTALLIVVGVAMDTVGQIESHMLTRHYEG 425
>gi|83854953|ref|ZP_00948483.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83941475|ref|ZP_00953937.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
gi|83842796|gb|EAP81963.1| preprotein translocase SecY [Sulfitobacter sp. NAS-14.1]
gi|83847295|gb|EAP85170.1| preprotein translocase SecY [Sulfitobacter sp. EE-36]
Length = 466
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 245/419 (58%), Gaps = 24/419 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++ + + F+GG +GR+GI
Sbjct: 35 LRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFMESAGQGIGGMVSMFTGGALGRMGIF 94
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + P L+ L K+EGE GRKK+ QYTR+ +V A +QA G +
Sbjct: 95 ALGIMPYISASIIVQLMTSMVPALEQL-KKEGEQGRKKINQYTRFGTVALATLQAYGLAV 153
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D + D + + + L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 154 SLE--AGDIAADPGMYFRIACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 211
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ II +L+ ++ +V+++ A RKI I Y R +
Sbjct: 212 PAA----IAQFFSSGRSGAISPAIIVGVLVMVIATIMFVVFMERALRKIHIQYPRRQVGQ 267
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL---NPGGSF 371
S++LP KVN +GV+P IF++S L LP T++ F+G + +V L PG
Sbjct: 268 KMYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTGPVMSVLLANFGPGQPL 327
Query: 372 YLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + +I FF Y+YTF + PD+V++ LK Q +P +RPGK TA +L+ V++RI V
Sbjct: 328 YLLFFVAMIVFFAYFYTFNVSFKPDEVADNLKNQNGFVPGIRPGKKTAEYLEYVVNRILV 387
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
LGS++LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 388 LGSLYLAAVCILPEILRGQFAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 444
>gi|389694590|ref|ZP_10182684.1| preprotein translocase, SecY subunit [Microvirga sp. WSM3557]
gi|388587976|gb|EIM28269.1| preprotein translocase, SecY subunit [Microvirga sp. WSM3557]
Length = 445
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 246/433 (56%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++I+FG K L + LG L + RLG YIPL G++ EA + S
Sbjct: 4 AAEQLAANINFGAIAKADELKKRIWFTLGALIIYRLGTYIPLPGIDPEALRQSFQSASGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +L I+P+I+A I+ QLL + P L+ L K+EGEAGRK + Q
Sbjct: 64 VLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVLPSLEAL-KKEGEAGRKILNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+ Q+ G + L+ V +++++V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVFLAVFQSWGIAVGLQSSGTIVQSPGPFFLISTVITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLGIVYVQEAE 300
+GNGTSL+IF I++ LP + T+ Q GL +I+ + ++ +V+++ A+
Sbjct: 183 GIGNGTSLIIFAGIVANLPNAIAGTLELGRQGAISTGLILGVIVMAVAIIYFVVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIA 356
R++ INY R ++++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLINYPKRQVGNRIYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATIASFQTSTDGTG 302
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
+ L G Y+ LI FF ++YT + +P + ++ LK+QG IP +RPG+
Sbjct: 303 VISMLTAYLGHGRPAYMFLYAALIVFFAFFYTAIVFNPTETADNLKKQGGFIPGIRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA F+ VL+RI+VLG+ +L I+ P ++ L + F GTS+LI+V DT +
Sbjct: 363 TADFIDQVLTRITVLGAAYLVIICLIPELLVSYAALPFY--FGGTSLLIVVSVTMDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
V +++ +Y+ +
Sbjct: 421 VHGHLLAHQYEGL 433
>gi|255994827|ref|ZP_05427962.1| preprotein translocase, SecY subunit [Eubacterium saphenum ATCC
49989]
gi|255993540|gb|EEU03629.1| preprotein translocase, SecY subunit [Eubacterium saphenum ATCC
49989]
Length = 424
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 238/396 (60%), Gaps = 13/396 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
RLG IP+ G+NRE D + + FSGG ++ I +L I P+I A I+ QL
Sbjct: 29 RLGANIPVPGINREVLSKLFDGGGGIFELFNLFSGGAFSQMTIFALSITPYITASIILQL 88
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY--LRPYVNDFSTDWV 217
L PKL+ L K GE G+KK+ QYTRY +V ++VQAIG + Y ++P +ND +
Sbjct: 89 LTIAIPKLETLAKEGGE-GQKKIAQYTRYLTVVLSLVQAIG-ITYGIVKPSLNDTGKLSI 146
Query: 218 LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF-GRTVAEAFQDGNY 276
V +LT G+AF ++GE+I+ +GNG SLLIF II+ +P G V + +
Sbjct: 147 ALVVVVLTAGTAFLMWLGEQINQYGIGNGISLLIFAGIIARMPTLLQGSMVKYEAGEVDA 206
Query: 277 IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
+ +A ++ +++++GI+ +QE +R++P+ YA R R +S+++P KVN +GV+P+
Sbjct: 207 VSIALFVLFAVVIIVGIIMIQEGQRRVPVQYAKRVVGRKMYGGQSSHIPMKVNQAGVIPV 266
Query: 337 IFSTSSLALPGTLARFTGIAALKK-AAVALNPGGS----FYLPTNILLIAFFNYYYTFLQ 391
IFS + L P T F +A + AA ++P GS Y +++LI FF Y+YT +
Sbjct: 267 IFSMAFLQTPLTFMHFWPNSAFGQWAAKWMSPSGSPGVWVYAIADVILILFFTYFYTAVS 326
Query: 392 LDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTH 451
+P ++++ +K G +P +RPGK+T +L V++RI+ +G+VFLA ++ P ++ Q+
Sbjct: 327 FNPLEIAQNMKANGGFVPGIRPGKTTVEYLNRVMTRITFVGAVFLAAISILPTILSQSMG 386
Query: 452 LTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
L+ F GTS+LI VG A DT ++++ +++ + Y+
Sbjct: 387 LSIH--FGGTSLLIAVGVALDTMKQIENQMLMRDYQ 420
>gi|384218098|ref|YP_005609264.1| preprotein translocase SECY subunit [Bradyrhizobium japonicum USDA
6]
gi|354956997|dbj|BAL09676.1| preprotein translocase SECY subunit [Bradyrhizobium japonicum USDA
6]
Length = 443
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 247/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGE+GRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGESGRKLLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I I++ LPA+ + Q GL ++I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILAGIVAELPAALANMLELGRQGAMSTGLILVVIIMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLILYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|21674978|ref|NP_663043.1| preprotein translocase subunit SecY [Chlorobium tepidum TLS]
gi|21648211|gb|AAM73385.1| preprotein translocase SecY subunit [Chlorobium tepidum TLS]
Length = 441
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 238/419 (56%), Gaps = 30/419 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L L + RLG +I + GV+ A N L D F GG R I SLG
Sbjct: 19 RILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGLFDLFVGGAFARASIFSLG 78
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL- 205
I+P+I+A I+ QLL + P +Q LQK EGE GR+K+ QYTRY ++ A++QA G + L
Sbjct: 79 IMPYISASIIIQLLGAVTPYVQKLQK-EGEEGRQKINQYTRYGTILIALLQAWGVSVNLS 137
Query: 206 ------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+ V D + +T+V +LT + F ++GE I++ +GNG SL+I I++
Sbjct: 138 SPSSFGKVVVPDPGFFFTITAVIILTASTVFVMWLGELITERGIGNGISLIIMIGILARF 197
Query: 260 PASFGRTVAEA----FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
PAS VAEA F N+I I+ + +V +V + A R+IP+ +A R R
Sbjct: 198 PASL---VAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATRRIPVQHAKRVVGRK 254
Query: 316 ---GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGT-LARFTGIAALKKAAVALNPGGSF 371
GG Q Y+P K+N++GVMPIIF+ S + LP T L+ F A++K A A F
Sbjct: 255 VYGGGTQ---YIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQKVAAAFAYDSWF 311
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y L+I FF Y+YT + +P +V++ ++RQG IP VRPGK+T F+ +L+RI++
Sbjct: 312 YAVVFGLMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEFIDNILTRITLP 371
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFA----GTSVLILVGCATDTARKVQAEIISQKY 486
G++ LA++A P + + ++T GFA GTS+LI+V DT ++V++ ++ + Y
Sbjct: 372 GAIALAVIAILPTFLTKFVNVTP--GFANFFGGTSLLIVVSVGLDTLQQVESHLMMRHY 428
>gi|403743639|ref|ZP_10953191.1| preprotein translocase, SecY subunit [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122669|gb|EJY56874.1| preprotein translocase, SecY subunit [Alicyclobacillus hesperidum
URH17-3-68]
Length = 431
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 243/417 (58%), Gaps = 20/417 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L L LA+ R+G YIP+ G+N A N+L S L+ FSGG R I ++
Sbjct: 14 LRNRILFTLMVLAVYRIGTYIPVPGMNVSALNAGQGNNALFSLLNMFSGGAFYRFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
+ P+I A I+ QLL + P+ ++ QK EGE+GR+++ Q TRY +VG +QAIG +
Sbjct: 74 SVTPYITASIIVQLLQSGVIPRFEEWQK-EGESGRQRLTQVTRYLTVGLGCLQAIGFTYM 132
Query: 204 YLRP-YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+ R + + +W + V LT G + GE I++ +GNG SLLIF I+S
Sbjct: 133 FARSGLLLASANNWWSYIVIVVTLTAGDTLLMWFGEMITEKGVGNGISLLIFVGILSRF- 191
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVY-------VQEAERKIPINYASRYTS 313
++ G+ V ++ G L I+ +LL+ GIV VQ+AERK+PI YA R
Sbjct: 192 STLGQEVYSSWYMGQSSHLFLAILKTLLLIAGIVLIFALIVLVQQAERKVPIQYAKRVVG 251
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL---NPGGS 370
R+ + +Y+P KV ++GV+P+IF+ S L LP T+A + + AA L +P
Sbjct: 252 RTVYSGQQSYIPIKVIAAGVIPVIFAVSLLILPYTIASY--FQSHHWAAFILRYLSPQTG 309
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
+Y+ +LLI F+++YT +Q++P ++EQL++ IP VRPG+ T ++ V++RI+V
Sbjct: 310 WYMALEVLLIIVFSFFYTHVQINPQQLAEQLQKHAGFIPGVRPGRDTEMYIIKVINRITV 369
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GSVFL +++ P ++ +LT + GTS++ILVG A T ++++ +++ ++Y+
Sbjct: 370 FGSVFLGVISILPFLLLGAINLTDY-NIQGTSLIILVGVALQTMQQMEGQLLQRQYR 425
>gi|401564481|ref|ZP_10805373.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC6]
gi|400188808|gb|EJO22945.1| preprotein translocase, SecY subunit [Selenomonas sp. FOBRC6]
Length = 419
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 238/413 (57%), Gaps = 7/413 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ I ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSIFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + S +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPSPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS-R 314
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R R
Sbjct: 185 ALPKNIG-TIYAYVKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPITYAKRLVGGR 243
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP 374
G S+++PFKVN +GV+PIIF++S L P T+A+F + +K AA L G
Sbjct: 244 VGSSGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVPWVKTAAAYLEWGKPLQTT 303
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+
Sbjct: 304 LYVLMIIFFTYFYTSVTVKIPDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAF 363
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
FLA +A P ++ T++ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 FLAFIAVLPNMVAGATNIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 415
>gi|423590583|ref|ZP_17566645.1| preprotein translocase subunit secY [Bacillus cereus VD045]
gi|401220220|gb|EJR26862.1| preprotein translocase subunit secY [Bacillus cereus VD045]
Length = 433
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + + ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVVLILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|345001517|ref|YP_004804371.1| preprotein translocase subunit SecY [Streptomyces sp. SirexAA-E]
gi|344317143|gb|AEN11831.1| preprotein translocase, SecY subunit [Streptomyces sp. SirexAA-E]
Length = 439
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 250/439 (56%), Gaps = 37/439 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDS 131
F FK P L K L LG + L RLG +IP+ GV+ E +DQ NSL ++
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVSYENVQICVDQASDGNNSLFGLVNM 64
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 FSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTV 123
Query: 192 GFAIVQAIGQVLYLR--------PYVNDFSTDW-VLTSVTL---LTLGSAFTTYIGERIS 239
AI+Q G V R P N + + T+V + +T G+A ++GE I+
Sbjct: 124 ALAILQGTGLVATARSGALFSGCPVANQIVPNQSIFTTVVMVITMTAGTAAVMWLGELIT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEA--FQDGNYIGLATIIISFILLVLGIVYVQ 297
D +GNG S+L+F SI + PA+ + E+ DG + I+I F+++ L +V+V+
Sbjct: 184 DRGIGNGMSILMFISIAASFPAAL-WAIKESGKLADGWIEFITVILIGFVMVGL-VVFVE 241
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
+A+R++P+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 242 QAQRRVPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSTA 301
Query: 358 LKKAAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
+ + +Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G
Sbjct: 302 GWATWIQDHFVKGDHPYYIATYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAG 361
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVG 468
+ TA +L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG
Sbjct: 362 RPTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILIIVG 416
Query: 469 CATDTARKVQAEIISQKYK 487
+T +++++++ + Y+
Sbjct: 417 VGLETVKQIESQLQQRNYE 435
>gi|440696631|ref|ZP_20879086.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
gi|440281139|gb|ELP68800.1| preprotein translocase, SecY subunit [Streptomyces turgidiscabies
Car8]
Length = 438
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 242/436 (55%), Gaps = 32/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-----QNSLLSTLDS 131
F FK P L K L LG + + R+G +IP+ GV+ + +D L ++
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYQNVQTCIDVAKNGSQGLFGLVNM 64
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 FSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTV 123
Query: 192 GFAIVQAIGQVLYLR------------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERIS 239
AI+Q G V R V D S +T V +T G+A ++GE I+
Sbjct: 124 ALAILQGTGLVATARSGALFSGCTVASEIVPDQSIFVTVTMVITMTAGTAMVMWLGELIT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEA 299
D +GNG S+L+F SI + P++ + G +I T+I +++V +V+V++A
Sbjct: 184 DRGIGNGMSILMFISIAATFPSALWAIKTQGDLAGGWIEFGTVIAVGLVMVALVVFVEQA 243
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK 359
+R+IP+ YA R R S Y+P KVN +G++P+IF++S L +P +A+F+G +
Sbjct: 244 QRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGIIPVIFASSLLYIPALVAQFSGGTSGW 303
Query: 360 KAAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
K + N Y+ T LI FF ++Y + +P++V++ +K+ G IP +R G+
Sbjct: 304 KTWIEQNLTKGDHPIYIATYFTLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRP 363
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCAT 471
TA +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG
Sbjct: 364 TAEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFNANQNFPFGGTSILIIVGVGL 418
Query: 472 DTARKVQAEIISQKYK 487
+T +++++++ + Y+
Sbjct: 419 ETVKQIESQLQQRNYE 434
>gi|59710864|ref|YP_203640.1| preprotein translocase subunit SecY [Vibrio fischeri ES114]
gi|197334051|ref|YP_002155016.1| preprotein translocase subunit SecY [Vibrio fischeri MJ11]
gi|423684974|ref|ZP_17659782.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
gi|59478965|gb|AAW84752.1| preprotein translocase membrane subunit [Vibrio fischeri ES114]
gi|197315541|gb|ACH64988.1| preprotein translocase, SecY subunit [Vibrio fischeri MJ11]
gi|371496021|gb|EHN71615.1| preprotein translocase subunit SecY [Vibrio fischeri SR5]
Length = 443
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 248/419 (59%), Gaps = 20/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
L + L ++G L + R G ++P+ G++ A + +L Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGID-AAVLADLFEQQQGTIIELFNMFSGGALSRASI 77
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A IV QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 78 LALGIMPYISASIVVQLLTVVHPPLAEL-KKEGESGRRKINQYTRYGTLVLATFQAIGIA 136
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L + + + LT+ L G+ F ++GE+I++ +GNG SL+IFT I++
Sbjct: 137 TGLPSMIPGLVANPDMMFYLTATVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAG 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G T+ +A Q ++ L +I ISF ++ +V+++ +R+I +NYA R R
Sbjct: 197 LPPAIGETIQQARQGELHVLLLLLIAVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRKV 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG------IAALKKAAVALNPGGS 370
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 256 FAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGGNGEGTFGWLTDVSMALSPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ T ++ V++R+++
Sbjct: 316 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTTKYIDKVMTRLTL 375
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 376 AGAMYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 432
>gi|352685665|ref|YP_004897650.1| preprotein translocase subunit secY [Acidaminococcus intestini
RyC-MR95]
gi|350280320|gb|AEQ23510.1| preprotein translocase subunit secY [Acidaminococcus intestini
RyC-MR95]
Length = 376
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 215/369 (58%), Gaps = 5/369 (1%)
Query: 121 DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRK 180
+ +L LD FSGG + + I ++ I P+INA I+ QLL + P L++ K EG G K
Sbjct: 7 NNGNLFGLLDLFSGGALSKFSIFAMSITPYINASIITQLLTVVIPTLEEWSK-EGAEGAK 65
Query: 181 KVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
K+ + RYA+V ++QAIG LR VN+ + LT V LT G+ +IGE+I+
Sbjct: 66 KINKINRYAAVVLGVIQAIGMAYGLRVAVNNPTFFSYLTIVVSLTAGTILLMWIGEQITA 125
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQE 298
+GNG SL+IF IIS LP+ + Q G N L + +L+V+ +V +
Sbjct: 126 RGIGNGISLIIFAGIISRLPSGMA-VMYRYLQAGTINIFNLLIFAVLAVLMVMFVVAITV 184
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL 358
A RKIP+ YA R R + Y+P KVN +GVMPIIF++S L P T+A+F + +
Sbjct: 185 AYRKIPVQYAKRVVGRKMYGGHTTYIPLKVNQAGVMPIIFASSVLMFPVTIAQFIQVPWV 244
Query: 359 KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
+K A L G +LLI FF Y+YT + L+ ++ + +K+ G IP +RPGK T
Sbjct: 245 QKVASYLQWGTPLQTTLYVLLILFFTYFYTAVSLNIPEMCDNIKKYGGFIPGLRPGKPTI 304
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQ 478
A+L +++RI++ G+VFLA +A P +I T ++ F GT++LI+VG A DT ++V+
Sbjct: 305 AYLDKIMNRITLAGAVFLAFIAVMPNIIVWLTGISGIY-FGGTALLIVVGVALDTMKQVE 363
Query: 479 AEIISQKYK 487
+ ++ + Y+
Sbjct: 364 SMVLMRHYQ 372
>gi|121602796|ref|YP_989017.1| preprotein translocase subunit SecY [Bartonella bacilliformis
KC583]
gi|421760820|ref|ZP_16197634.1| preprotein translocase subunit SecY [Bartonella bacilliformis INS]
gi|120614973|gb|ABM45574.1| preprotein translocase, SecY subunit [Bartonella bacilliformis
KC583]
gi|411174588|gb|EKS44620.1| preprotein translocase subunit SecY [Bartonella bacilliformis INS]
Length = 448
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+F F + L + L L + R G YI + GVN + + ++
Sbjct: 4 AAEQLASNINFSTFSRATELKKRIWFTLAALLVYRFGTYISIPGVNIDTLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L ++ F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 MLGLVNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIVPSLESL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A+VQA G + L V + + ++V L G+ F ++GE+
Sbjct: 123 YTRYVTVILALVQAFGVAVALETGIGTGLQIVVEPGLMFRFSAVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L III + +V IV+V
Sbjct: 183 ITSRGVGNGISLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIIIIAVSVVGIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDVSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDQM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L+ G Y+ LIAFF ++YT + +P+D ++QLK+ IP +RPG
Sbjct: 303 PEWIQSVSFSLSHGQPLYMIIYAALIAFFCFFYTAIVFNPNDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
K TA ++ VL+RI+V+G++++ ++ P + H+ + G GTS+LI+V DT
Sbjct: 363 KRTAEYIDYVLTRITVIGAIYIILVCLLPEFMISALHVPFYLG--GTSLLIVVNVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|425064108|ref|ZP_18467233.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
gi|404381701|gb|EJZ78169.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida X73]
Length = 441
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 250/418 (59%), Gaps = 18/418 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 17 GELKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRY+++ A +QA+G
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAEL-KKEGEAGRRKISKYTRYSTLVLATLQAVGI 135
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L V + + L +V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 136 STGLPNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS- 315
LP++ G+T+ + Q ++ + +I + V +V+V+ +R+I + YA R R
Sbjct: 196 GLPSAIGQTIEQTRQGQMHLLVLLLIAIIVFAVTYFVVFVERGQRRIKVEYAKRQQGRQI 255
Query: 316 -GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGS 370
GG S +LP KVN +GV+P IF++S + P TLA++ G + L ++ L+PG
Sbjct: 256 LGG--HSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R+++
Sbjct: 314 LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G +++ + P V+ ++ + F GTS+LI+V D +VQ+ ++S KY++
Sbjct: 374 IGGLYITFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIAQVQSHLMSTKYES 429
>gi|378775245|ref|YP_005177488.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|383311241|ref|YP_005364051.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835261|ref|YP_006240578.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. 3480]
gi|417851419|ref|ZP_12497164.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|417854184|ref|ZP_12499506.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421264144|ref|ZP_15715149.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425066277|ref|ZP_18469397.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
gi|338218368|gb|EGP04141.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219491|gb|EGP05140.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|356597793|gb|AET16519.1| Preprotein translocase subunit SecY [Pasteurella multocida 36950]
gi|380872513|gb|AFF24880.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201964|gb|AFI46819.1| preprotein translocase, SecY subunit [Pasteurella multocida subsp.
multocida str. 3480]
gi|401688609|gb|EJS84172.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404381862|gb|EJZ78327.1| Preprotein translocase secY subunit [Pasteurella multocida subsp.
gallicida P1059]
Length = 441
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 250/418 (59%), Gaps = 18/418 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 17 GELKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRY+++ A +QA+G
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAEL-KKEGEAGRRKISKYTRYSTLVLATLQAVGI 135
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L V + + L +V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 136 STGLPNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS- 315
LP++ G+T+ + Q ++ + +I + V +V+V+ +R+I + YA R R
Sbjct: 196 GLPSAIGQTIEQTRQGQMHLLVLLLIAVIVFAVTYFVVFVERGQRRIKVEYAKRQQGRQI 255
Query: 316 -GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGS 370
GG S +LP KVN +GV+P IF++S + P TLA++ G + L ++ L+PG
Sbjct: 256 LGG--HSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R+++
Sbjct: 314 LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G +++ + P V+ ++ + F GTS+LI+V D +VQ+ ++S KY++
Sbjct: 374 IGGLYITFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIAQVQSHLMSTKYES 429
>gi|242371877|ref|ZP_04817451.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
gi|242350384|gb|EES41985.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
M23864:W1]
Length = 430
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 244/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS--- 262
D S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S
Sbjct: 139 GQLIIDKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSIEQ 198
Query: 263 FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
FG+++ D + ++ + ++++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FGQSLFVGQDDTSLAWLKIVGLVVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + I+L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIVYIVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVSQKEYK 425
>gi|254502783|ref|ZP_05114934.1| preprotein translocase, SecY subunit [Labrenzia alexandrii DFL-11]
gi|222438854|gb|EEE45533.1| preprotein translocase, SecY subunit [Labrenzia alexandrii DFL-11]
Length = 443
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 248/433 (57%), Gaps = 15/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNS 124
AA S+++F F K L + LG L + RLG YIP+ G+N EAF N Q+
Sbjct: 4 AAEQLASNLNFSAFAKAEELKKRIWFTLGALLVYRLGTYIPMPGINPEAFAQAFNQAQSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 IIGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPSLEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWVLTSVTLLTL--GSAFTTYIGERISDL 241
YTRY +V A QA G + L N + W + T++TL G+ F ++GE+I+
Sbjct: 123 YTRYGTVVLAAFQAYGIAVGLEGATNVVTDPGWFFRASTVITLVGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG--LATIIISFILLVLGIVYVQEA 299
+GNG SL+IF I++ LP++ +T+ Q G LA I+++ +++ IV+++ A
Sbjct: 183 GIGNGISLIIFAGIVAGLPSAIVQTLELGRQGSLATGIILAVILLAIVVIAF-IVFMERA 241
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIA 356
+R++ I Y R +++LP K+N++GV+P IF++S L +P T++ F G
Sbjct: 242 QRRLLIQYPKRQMGNRMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATISGFNAGGGNE 301
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
L L G ++ +I FF ++YT + +P D ++ LK+ G IP +RPG+
Sbjct: 302 WLTTITALLGHGQPLFMVFYAAMIIFFCFFYTAIVFNPSDTADNLKKHGGFIPGIRPGER 361
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G++++ I+ P + T + + F GTS+LI+V DT +
Sbjct: 362 TAQYIDFVLTRITVVGAIYITIVCLLPEFLISATGVPFY--FGGTSLLIVVSVTMDTVSQ 419
Query: 477 VQAEIISQKYKNI 489
+Q +++ +Y+ +
Sbjct: 420 IQGHLLAHQYEGL 432
>gi|225849527|ref|YP_002729692.1| preprotein translocase subunit SecY [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644157|gb|ACN99207.1| preprotein translocase, SecY subunit [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 429
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 238/408 (58%), Gaps = 26/408 (6%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA+ RLG +IP+ GVN E + + +L + + FSGG +GR + +LG++P+I+A
Sbjct: 25 LAVYRLGTHIPVPGVNSEMLMHYFNSAGGALFNIYNLFSGGALGRFSVFALGVMPYISAS 84
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST 214
I+ QLL + P L+ LQK EG+ GR K+ QYTRY ++ A Q++G ++L +
Sbjct: 85 IIMQLLTAVIPTLERLQKEEGDYGRWKISQYTRYLTIAIASFQSLGLSIWLTTLKTESGA 144
Query: 215 DWV-LTSVTLLTL-------GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
+ L+ T + L G+ ++GE+I++ +GNG S++I + I++ + + RT
Sbjct: 145 SLISLSPFTFVILTTVIVTTGTVLLMWLGEKITEFGIGNGISMIILSGIVAGIVPAILRT 204
Query: 267 VAEAFQDGNYIGLATIIISFILLVL-GIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
I L T+ + I+ V+ GIVY+QEAER+IPI YA R S Q ++YLP
Sbjct: 205 YELVKVGVISILLLTVALVIIVAVIAGIVYIQEAERRIPIQYARRNIMIS---QSASYLP 261
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA------LNPGGSFYLPTNILL 379
FK+N SGV+PIIF+ + L P T+A+F K+ +A L+P Y + L
Sbjct: 262 FKLNPSGVIPIIFAVAILMFPATIAQFFA----NKSEIARMIVDYLSPQSYVYFGLYVAL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF Y+YT + ++P D+++ L+R GA IP VR G T ++ +L+R+ GS+FLA++
Sbjct: 318 IIFFAYFYTAILINPVDIADNLRRSGAFIPGVRSGSQTVEYINYILTRLVFAGSIFLALI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P ++ + ++ + F GTS LI+V A DT +++A + +KY+
Sbjct: 378 AILPMLLIKWLNVPFY--FGGTSALIVVVVALDTIHQIEAYLAMKKYE 423
>gi|49475774|ref|YP_033815.1| preprotein translocase subunit SecY [Bartonella henselae str.
Houston-1]
gi|49238581|emb|CAF27822.1| Preprotein translocase secY subunit [Bartonella henselae str.
Houston-1]
Length = 448
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + LG L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ LP++F + + A + D + TII + ++ IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLFITIIFIAVSVIAIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ +L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|163868630|ref|YP_001609839.1| preprotein translocase subunit SecY [Bartonella tribocorum CIP
105476]
gi|161018286|emb|CAK01844.1| translocase SecY subunit precursor [Bartonella tribocorum CIP
105476]
Length = 448
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 251/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVIPSLETL-KKEGEIGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVILAILQAFGIAVALESGIGTGLQIVVEPGLMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ LP++F + + A + D + L TI++ +L++ IV++
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLVTIVLIAVLVIGLIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGHQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISYSLGHGQPLYMIIYAFLMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGALYIILVCLLPEFMISAFQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|303233159|ref|ZP_07319832.1| preprotein translocase, SecY subunit [Atopobium vaginae PB189-T1-4]
gi|302480744|gb|EFL43831.1| preprotein translocase, SecY subunit [Atopobium vaginae PB189-T1-4]
Length = 426
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 240/403 (59%), Gaps = 21/403 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSL----LSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R G Y+P GV + + S L+ L+ FSGG + R+ + SLGI+P+I AQI+
Sbjct: 29 RFGAYLPAPGVPFSRMLKAFQEVSAGSGALAVLNLFSGGALSRVSVFSLGIMPYITAQII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST-- 214
Q+ + P L L K EGE+G++K+ QYTRY +V + V AIG + Y DFS
Sbjct: 89 LQMFQAVIPSLAVLAK-EGESGQRKITQYTRYLTVALSFVNAIGYYFLFKSYGIDFSQLV 147
Query: 215 --DWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
+WV +T + +L G+ ++GE I+ +GNG SL+IF +I++ LP++ +++
Sbjct: 148 IPEWVVAITIIGVLLTGAIIIMWLGEVITQRGIGNGMSLIIFANILAGLPSALTHSIST- 206
Query: 271 FQDGNYIGLATIIISFILLVLGIVYV---QEAERKIPINYASRYTSRSGGLQRSAYLPFK 327
+ IG T +I+ I++V + + + +R+IPI YA R T R +S YLP K
Sbjct: 207 ----STIGSVTTLITLIVIVAIVPVIIYIERGQRRIPIQYAKRVTGRRIMGGQSTYLPIK 262
Query: 328 VNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYY 386
VN++GV+PIIF+++ L +P +A F + ++ A +L+ G ++ ++ LI FF Y+
Sbjct: 263 VNTAGVVPIIFASALLYMPAQVAVFFPQVDWIQTFANSLSSGWVNWV-LSVFLIVFFAYF 321
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
YT + +PD+ S+QLK+ G IP VRPG +TAA +K VL I++ G++F+A +A P+++
Sbjct: 322 YTAMVFNPDETSDQLKKAGGFIPGVRPGGATAAHIKNVLDHITLPGALFMAAIAVIPSIL 381
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T T + F GTSVLILVG A DT ++++++ Y+ +
Sbjct: 382 FTLTGNTLLQAFGGTSVLILVGVAMDTISQLESQLKMHNYEGL 424
>gi|15603260|ref|NP_246334.1| preprotein translocase subunit SecY [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721770|gb|AAK03479.1| SecY [Pasteurella multocida subsp. multocida str. Pm70]
Length = 441
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 250/418 (59%), Gaps = 18/418 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 17 GELKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRY+++ A +QA+G
Sbjct: 77 IFALGIMPYISASIIIQLLTTVHPALAEL-KKEGEAGRRKISKYTRYSTLVLATLQAVGI 135
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L V + + L +V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 136 STGLPNMLPGLVPNVGFSFYLAAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 195
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS- 315
LP++ G+T+ + Q ++ + +I + V +V+V+ +R+I + YA R R
Sbjct: 196 GLPSAIGQTIEQTRQGQMHLLVLLLIAVIVFAVTYFVVFVERGQRRIKVEYAKRQQGRQI 255
Query: 316 -GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGS 370
GG S +LP KVN +GV+P IF++S + P TLA++ G + L ++ L+PG
Sbjct: 256 LGG--HSTHLPLKVNMAGVIPAIFASSIILFPATLAQWLGEGSSLEWLTDLSMLLHPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R+++
Sbjct: 314 LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G +++ + P V+ ++ + F GTS+LI+V D +VQ+ ++S KY++
Sbjct: 374 IGGLYITFVCLVPYVMTSAWNVQFY--FGGTSLLIVVVVIMDFIAQVQSHLMSTKYES 429
>gi|149192389|ref|ZP_01870590.1| protein translocase subunit SecY [Vibrio shilonii AK1]
gi|148833780|gb|EDL50816.1| protein translocase subunit SecY [Vibrio shilonii AK1]
Length = 444
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|146340077|ref|YP_001205125.1| preprotein translocase subunit SecY [Bradyrhizobium sp. ORS 278]
gi|146192883|emb|CAL76888.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 278]
Length = 443
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 246/432 (56%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKMLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q GL I+I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|408680117|ref|YP_006879944.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
gi|328884446|emb|CCA57685.1| Preprotein translocase secY subunit [Streptomyces venezuelae ATCC
10712]
Length = 450
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 242/438 (55%), Gaps = 33/438 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDS 131
F FK P L K L L + L RLG +IP+ GV+ EA + Q NSL ++
Sbjct: 16 FARAFKTPDLRKKLLFTLAIIVLYRLGAHIPVPGVSYEAVQQCVKQASEGNNSLFGLVNM 75
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 76 FSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTV 134
Query: 192 GFAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERIS 239
A++Q G V + V D S + T V +T G+ ++GE I+
Sbjct: 135 ALAVLQGTGLVATAKSGALFSGCRVADQVVPDPSIFTIATMVITMTAGTCIVMWLGELIT 194
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEA 299
D +GNG S+L+F SI + P + +I T+I+ ++V +V+V++A
Sbjct: 195 DRGIGNGMSILMFISIAAGFPGALWAIKESGKLAKGWIEFGTVILIGFVMVALVVFVEQA 254
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK 359
+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F+ A
Sbjct: 255 QRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIAQFSNSTAGW 314
Query: 360 KAAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
K + + +Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G+
Sbjct: 315 KTWIEAHFVKGDHPYYIATYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRP 374
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCA 470
TA +L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG
Sbjct: 375 TAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANANFPFGGTSILIIVGVG 429
Query: 471 TDTARKVQAEIISQKYKN 488
+T +++++++ + Y+
Sbjct: 430 LETVKQIESQLQQRNYEG 447
>gi|229053976|ref|ZP_04195410.1| Preprotein translocase subunit secY [Bacillus cereus AH603]
gi|228721394|gb|EEL72915.1| Preprotein translocase subunit secY [Bacillus cereus AH603]
Length = 425
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITSKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|410668868|ref|YP_006921239.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
gi|409106615|gb|AFV12740.1| preprotein translocase SecY [Thermacetogenium phaeum DSM 12270]
Length = 424
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 227/397 (57%), Gaps = 15/397 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G ++P+ G+N E + L + L D SGG RL + ++ I P+INA I+ QLL
Sbjct: 29 RIGAHVPVPGINPEV-LEKLFEGQLFGIFDVISGGAFRRLSVFAMSITPYINASIIMQLL 87
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL-------RPYVNDFS 213
+ P+L+ L K EGEAGRK ++QYTRY +V +QAIG + L P +N+
Sbjct: 88 TIVIPRLEQLSK-EGEAGRKVIVQYTRYGTVLLGFIQAIGMAIALGRPMQGMPPAINNPG 146
Query: 214 TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD 273
L +LT G+AF ++GE I++ +GNG SL+IF I+S LP+ + +
Sbjct: 147 IGTYLMIAIILTAGTAFLMWLGEMITEKGIGNGISLIIFAGIVSRLPSGAASILQQL--S 204
Query: 274 GNYIGLATIIISFIL---LVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNS 330
I + ++II +L ++ G+V V E +R+IP+ YA R R +S ++P +VN
Sbjct: 205 AGVIPITSVIILVVLGLLIIAGVVAVNEGQRRIPVQYAKRVMGRKVYGGQSTHIPLRVNQ 264
Query: 331 SGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFL 390
+GV+PIIF+ S + P +AR+ + AL G + LLI FF Y+YT +
Sbjct: 265 AGVIPIIFAMSLMLFPVQIARWIDHPWARAVESALGFGTALNSVLYALLIIFFTYFYTAI 324
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
+P DV++ LK+ G +P +RPG+ T ++ VL+R+++ G+VFLA++A P + T
Sbjct: 325 IFNPMDVADNLKKYGGFVPGLRPGRPTGEYINRVLTRLTLAGAVFLALIAILPNFMITFT 384
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ F GT++LI+VG A +T ++ ++ ++ + Y+
Sbjct: 385 KIPTLY-FGGTALLIVVGVALETMKQFESYLLMRHYQ 420
>gi|365889708|ref|ZP_09428375.1| Preprotein translocase secY subunit [Bradyrhizobium sp. STM 3809]
gi|365334573|emb|CCE00906.1| Preprotein translocase secY subunit [Bradyrhizobium sp. STM 3809]
Length = 443
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 246/432 (56%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKMLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVLLAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q GL I+I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|89076304|ref|ZP_01162645.1| preprotein translocase SecY [Photobacterium sp. SKA34]
gi|89048008|gb|EAR53597.1| preprotein translocase SecY [Photobacterium sp. SKA34]
Length = 441
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 247/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGAILIFRAGSFVPIPGIDAAVLASLFEQQKGTIIEMFNMFSGGALSRASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPY----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ + +V L G+ F ++GE+I++ +GNG SL+IFT I++ L
Sbjct: 138 GLPSMIPGLVHNPGPSFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQD--GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q + L ++ISF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIVVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G+ L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQSEGLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|407010050|gb|EKE25055.1| hypothetical protein ACD_5C00313G0003 [uncultured bacterium]
Length = 423
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 227/397 (57%), Gaps = 14/397 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+ +PL GVN E + N L L+ FSGGG+ + I LG+ P+I A I+ QL+
Sbjct: 29 RIAANVPLPGVNIEQLRRLFEGNQFLGMLNVFSGGGLTNISIVMLGVGPYITASIIMQLM 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDFSTDWVL 218
I P+++ L K EGEAGR+K +TR+ +V AI+Q V LR + S+ +
Sbjct: 89 TMIVPRVEQLYKEEGEAGRQKFNMWTRWLTVPLAILQTFSMVTLLRSQGVLTVTSSFDIA 148
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG 278
V + T G+ F ++GE I++ +GNG SL+IF I+S LP+ + ++
Sbjct: 149 VIVIIATAGTVFLMWLGELITEKGIGNGVSLIIFAGIVSGLPSGLSKLFLTFDSTQVFVY 208
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--GGLQRSAYLPFKVNSSGVMPI 336
L ++++ I + G+V V E +R IP++YA R GG+ S++LP +VN +GV+PI
Sbjct: 209 LGLLVVTLITIA-GVVLVTEGQRNIPVSYAKRVRGEKTYGGV--SSHLPLRVNQAGVIPI 265
Query: 337 IFSTSSLALPGTLARFTGIA---ALKKAAVALN---PGGSFYLPTNILLIAFFNYYYTFL 390
IF+ S + PG +A F A A+ AA +N FY +LI F Y+YT +
Sbjct: 266 IFAMSIMLFPGMIASFLMKASSPAIANAASMVNNLFQNQVFYSSMYFVLIVMFTYFYTAV 325
Query: 391 QLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTT 450
DP +SE L++QG IP +RPGK+TA FL +++RI++ GS+FL +A P +++ T
Sbjct: 326 VFDPVKISENLQKQGGYIPGIRPGKTTADFLYRIMNRITLTGSIFLGTIAVLPFIVQGVT 385
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ + + GT +LI+V +T ++++ +++ + Y+
Sbjct: 386 NIQSLQ-IGGTGILIVVSVVIETIKQIEGQLVMRDYE 421
>gi|206889576|ref|YP_002249226.1| preprotein translocase subunit SecY [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741514|gb|ACI20571.1| preprotein translocase, SecY subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 435
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 246/427 (57%), Gaps = 26/427 (6%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSG 134
F + K P L + L L LA+ R+G +IP G++ EA L + +++ D F+G
Sbjct: 7 FRNILKIPELRARVLFTLAMLAVFRIGAHIPTPGIDGEALSKFLLERGGAVMGFFDIFTG 66
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + ++ I +LG++P+I+A I+FQLL + P LQ L K EGE GRKK+ +YTRYA++ A
Sbjct: 67 GALSKVTIFALGVMPYISASIIFQLLTVVIPSLQKLAK-EGEEGRKKITRYTRYATIVIA 125
Query: 195 IVQAIGQVLYLRP-----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
+Q G + L ++ + + + ++ LT G+AF ++GE+I++ +GNG SL
Sbjct: 126 AIQGFGIAVGLESMGGGQFIQEPGWSFRIITMITLTAGTAFLMWLGEQITEKGIGNGISL 185
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL--------GIVYVQEAER 301
+IF I++ P + F N + + I F+L+++ GI++++ +R
Sbjct: 186 IIFAGIVARFPNAI-------FYTYNLVRTGELSIFFVLILIVVMVGVVAGIIFIERGQR 238
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
+IPI YA R + + YLP K+NS+GV+P IF++S L P T+A F + ++
Sbjct: 239 RIPIQYAKRVVGKKMYGGYTTYLPLKINSAGVIPPIFASSVLMFPATVAGFIAVPWVQAL 298
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
A ++PG ++ + LI FF Y+YT + +P +++E L++ G I +RPG+ T+ ++
Sbjct: 299 AKQMSPGSFLHVILYVGLIIFFTYFYTAVIYNPVEIAENLQKNGGYITGIRPGQKTSEYI 358
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VLSR++ +G+++L+ + P ++ + + F GTS+LI VG A DT +++ +
Sbjct: 359 YRVLSRLTFIGALYLSAVCVLPEILIAKFKVPFY--FGGTSLLIAVGVALDTVSQIETHM 416
Query: 482 ISQKYKN 488
IS+ Y+
Sbjct: 417 ISRSYEG 423
>gi|336123193|ref|YP_004565241.1| SecY [Vibrio anguillarum 775]
gi|335340916|gb|AEH32199.1| SecY [Vibrio anguillarum 775]
Length = 444
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 245/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALSRASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ AI QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLAIFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQD--GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G+T+ +A Q + L ++SF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLSFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGS 370
+S +LP K+N +GV+P IF++S + PGTLA+ G L ++AL+PG
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQSFGQNGESSTFGWLTDVSLALSPGQP 316
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTARYIDKVMTRLTL 376
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 377 AGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYDSV 433
>gi|363423620|ref|ZP_09311683.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
gi|359731558|gb|EHK80600.1| preprotein translocase subunit SecY [Rhodococcus pyridinivorans
AK37]
Length = 437
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 245/423 (57%), Gaps = 30/423 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV---NREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
K L LG +AL RLG +P GV N +A V L +Q + S ++ FSGG + +L +
Sbjct: 17 KILIALGLVALYRLGATVPSPGVDYGNVQACVDQLAGSEQAGIYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+PFI A I+ QLL + P+ ++L+K EG++G+ K+ QYTRY +V A++QA G V
Sbjct: 77 FAIGIMPFITASIIVQLLTVVIPRFEELRK-EGQSGQAKMTQYTRYLAVALAVLQATGIV 135
Query: 203 -LYLR---------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
L R P + D S ++ V ++T G+A + GE I++ +GNG SLLIF
Sbjct: 136 ALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAAVVMWFGELITERGVGNGMSLLIF 195
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I + LP+ GR + E+ G + A + + + L+ G+V++++ +R+IP+ YA R
Sbjct: 196 AGIAAALPSE-GRMILES--RGGLV-FAIVCVVALALITGVVFIEQGQRRIPVQYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA--------VA 364
R S YLP KVN +G++P+IF++S L LP +A+ TG +
Sbjct: 252 GRRMYGGSSTYLPLKVNQAGIIPVIFASSLLYLPNLVAQLTGATTNPDPSWWQRIINEYL 311
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+NP Y+ LI FF ++Y + +P++ ++++K+ G IP +RPG+ TA +L V
Sbjct: 312 VNPNNPVYIAIYFALIVFFVFFYVAITFNPEERADEMKKYGGFIPGIRPGRPTAEYLSFV 371
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI+V GS++L ++A P + TA F G +VLILV A DT ++++++++ +
Sbjct: 372 LNRITVPGSIYLGLIATLPNFFLSGSQ-TASSIFGGAAVLILVSVALDTVKQIESQLMQR 430
Query: 485 KYK 487
Y+
Sbjct: 431 NYE 433
>gi|295688926|ref|YP_003592619.1| preprotein translocase subunit SecY [Caulobacter segnis ATCC 21756]
gi|295430829|gb|ADG10001.1| preprotein translocase, SecY subunit [Caulobacter segnis ATCC
21756]
Length = 451
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 244/437 (55%), Gaps = 16/437 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++F F K L + + L + RLG Y+P+ G++ AF + NS
Sbjct: 4 AAEQLAANMNFASFQKASELHKRIWFTIIALIVYRLGSYVPIPGIDVNAFARLFNNNSEG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I SL ++P+I+A I+ QL+ + P + L+K GEAGRK + Q
Sbjct: 64 ILGMFNMFSGGAVERMAIFSLNVMPYISASIIVQLMGSVYPPWEKLKKEGGEAGRKTLNQ 123
Query: 185 YTRYASVGFAIVQ--AIGQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERIS 239
YTRY +V A+VQ +I L +P V +V ++V LT G+ F ++GE+I+
Sbjct: 124 YTRYLAVVLAVVQSASIAMGLAAQPGVVVQGVGTVFFVASTVVALTGGTLFLMWLGEQIT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEA 299
+GNG SL+IF I++ LP G+ + + GNY L I+I + +L IV+++ +
Sbjct: 184 SRGVGNGVSLIIFAGIVARLPIVLGQMLVQGQTSGNYTPLFLIVIGCVAAILAIVFMERS 243
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK 359
+R++ ++Y R S+++P K+N++GV+P IF++S L LP T +F L
Sbjct: 244 QRRLLVHYPKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTAMQFVQTTNLP 303
Query: 360 KAAV-------ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
A AL G +L LLI FF+++YT + +P++ +E L++ G +P +R
Sbjct: 304 AWASWLPGVVGALQHGHPAFLIFYALLIIFFSFFYTSVVFNPEETAENLRKYGGFLPGIR 363
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PGK TA +L VL+R++V+G+ ++ + P + F GTS+LI+V D
Sbjct: 364 PGKRTAEYLDYVLTRLTVIGAAYITAVCVAPELAMMAIKSNQF-ALGGTSILIVVTVTMD 422
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q+ +++ +Y+ +
Sbjct: 423 TVAQIQSHLLAHQYEGL 439
>gi|367474549|ref|ZP_09474050.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 285]
gi|365273186|emb|CCD86518.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 285]
Length = 443
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 246/432 (56%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRSQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKMLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q GL I+I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|223042023|ref|ZP_03612204.1| preprotein translocase secY subunit [Actinobacillus minor 202]
gi|223017185|gb|EEF15616.1| preprotein translocase secY subunit [Actinobacillus minor 202]
Length = 441
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 249/419 (59%), Gaps = 17/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L ++ + + +T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SVALPNMLSGLVPNPNMLFYITAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LPA+ G+T+ EA Q G L ++I+ I + +V+V+ +R+I ++YASR R
Sbjct: 195 DLPATIGQTIEEARQ-GEISFLVLLLIAVIAFAVTYFVVFVERGQRRIVVHYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-----TGIAALKKAAVALNPGGS 370
R+++LP KVN +GV+P IF++S + P ++ ++ G L + L PG
Sbjct: 254 MAPARTSHLPLKVNMAGVIPAIFASSIILFPASITQWFGQSSEGFEWLFDLSQLLQPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R+++
Sbjct: 314 LYIVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+G++++ + P +I + G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 IGALYITFVCLVPYIITSLWKVPFQLG--GTSLLIVVVVIMDFIAQVQSHMMSLQYDSV 430
>gi|386841899|ref|YP_006246957.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374102200|gb|AEY91084.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451795193|gb|AGF65242.1| preprotein translocase subunit SecY [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 437
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 244/436 (55%), Gaps = 31/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F F+ P L K L LG + + R+G +IP+ GVN +A +++ L ++ F
Sbjct: 5 FARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAVQTCVNEAQGNQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D + +T V +T G+A ++GE ++D
Sbjct: 124 LAILQGTGLVATARSGALFSGCSVATSIVPDQAIFTTITMVICMTAGTAVVMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + G +I T+I +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWAIKKQGTLAGGWIEFGTVIAVGLVMVALVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G + K
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAGGKSGWK 303
Query: 361 AAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
V N Y+ + LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWVEQNLTKGDHPIYIVSYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFGASQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYKN 488
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYEG 434
>gi|163938138|ref|YP_001643022.1| preprotein translocase subunit SecY [Bacillus weihenstephanensis
KBAB4]
gi|423370712|ref|ZP_17348117.1| preprotein translocase subunit secY [Bacillus cereus VD142]
gi|423456249|ref|ZP_17433102.1| preprotein translocase subunit secY [Bacillus cereus BAG5X1-1]
gi|423473155|ref|ZP_17449897.1| preprotein translocase subunit secY [Bacillus cereus BAG6O-2]
gi|423514606|ref|ZP_17491113.1| preprotein translocase subunit secY [Bacillus cereus HuA2-1]
gi|423514982|ref|ZP_17491463.1| preprotein translocase subunit secY [Bacillus cereus HuA2-4]
gi|423526368|ref|ZP_17502817.1| preprotein translocase subunit secY [Bacillus cereus HuA4-10]
gi|423556874|ref|ZP_17533177.1| preprotein translocase subunit secY [Bacillus cereus MC67]
gi|163860335|gb|ABY41394.1| preprotein translocase, SecY subunit [Bacillus weihenstephanensis
KBAB4]
gi|401073448|gb|EJP81870.1| preprotein translocase subunit secY [Bacillus cereus VD142]
gi|401130848|gb|EJQ38503.1| preprotein translocase subunit secY [Bacillus cereus BAG5X1-1]
gi|401163418|gb|EJQ70764.1| preprotein translocase subunit secY [Bacillus cereus HuA4-10]
gi|401168483|gb|EJQ75746.1| preprotein translocase subunit secY [Bacillus cereus HuA2-4]
gi|401194189|gb|EJR01181.1| preprotein translocase subunit secY [Bacillus cereus MC67]
gi|402426653|gb|EJV58774.1| preprotein translocase subunit secY [Bacillus cereus BAG6O-2]
gi|402442006|gb|EJV73950.1| preprotein translocase subunit secY [Bacillus cereus HuA2-1]
Length = 433
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITSKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|365539198|ref|ZP_09364373.1| preprotein translocase subunit SecY [Vibrio ordalii ATCC 33509]
Length = 444
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALSRASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ AI QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLAIFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAVGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I F ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIILFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTARYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYDSV 433
>gi|28897051|ref|NP_796656.1| preprotein translocase subunit SecY [Vibrio parahaemolyticus RIMD
2210633]
gi|260877969|ref|ZP_05890324.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
AN-5034]
gi|260897582|ref|ZP_05906078.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
Peru-466]
gi|260903547|ref|ZP_05911942.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
AQ4037]
gi|433656605|ref|YP_007273984.1| Preprotein translocase secY subunit [Vibrio parahaemolyticus
BB22OP]
gi|28805259|dbj|BAC58540.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus RIMD
2210633]
gi|308087871|gb|EFO37566.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
Peru-466]
gi|308089977|gb|EFO39672.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
AN-5034]
gi|308109054|gb|EFO46594.1| preprotein translocase, SecY subunit [Vibrio parahaemolyticus
AQ4037]
gi|432507293|gb|AGB08810.1| Preprotein translocase secY subunit [Vibrio parahaemolyticus
BB22OP]
Length = 444
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|34499621|ref|NP_903836.1| preprotein translocase subunit SecY [Chromobacterium violaceum ATCC
12472]
gi|34105471|gb|AAQ61826.1| preprotein translocase secY subunit [Chromobacterium violaceum ATCC
12472]
Length = 439
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 246/416 (59%), Gaps = 13/416 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L+G L + R+G +IP+ G+N A + + Q LL + FSGG + R
Sbjct: 14 GDLKRRIWFLIGALIVYRIGAHIPVPGINPAELAKLFHTSQTGLLDMFNMFSGGALSRFT 73
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG- 200
+ +LGI+P+I+A I+ QL A++ P L+ L K+EG+AGR+K+ QYTRYA+V A Q+ G
Sbjct: 74 VFALGIMPYISASIILQLAAEVLPSLKQL-KKEGDAGRRKITQYTRYATVALATFQSFGI 132
Query: 201 -QVLYLRP-YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+LY +P V ++ LT+V L G+ F ++GE+I++ +GNG SL+I I +
Sbjct: 133 AVMLYKQPNLVMTAQWEFYLTTVVSLVTGTMFLMWLGEQITERGIGNGISLIICAGIAAG 192
Query: 259 LPASFGRTVAEAFQDGNYIGLATII-ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
+PA+ G+T+ Q I A ++ + IL+ +VY + +RK+ +NYA R
Sbjct: 193 VPAAIGKTLTLTSQGSLPILFAILLFVGVILVTFLVVYAERGQRKVLVNYAKRQVGNRVM 252
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + P T+ + G +A LK A L+PG Y+
Sbjct: 253 QGQSTHLPLKLNMAGVIPPIFASSIILFPATVLGWFGQGEHMAWLKGVADKLHPGQPIYV 312
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF Y+YT L +P + ++ LK+ GA IP +RPG+ T+ +++ ++ R++++G+
Sbjct: 313 LLYAAAIIFFCYFYTALVFNPKETADNLKKSGAFIPGIRPGEQTSRYIEKIILRLTLIGA 372
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ ++ P + ++ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 373 IYITLVCLLPEFLILKWNVPFY--FGGTSLLIIVVVTMDFMAQVQSYVLSHQYESL 426
>gi|150020865|ref|YP_001306219.1| preprotein translocase subunit SecY [Thermosipho melanesiensis
BI429]
gi|149793386|gb|ABR30834.1| preprotein translocase, SecY subunit [Thermosipho melanesiensis
BI429]
Length = 428
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 231/401 (57%), Gaps = 19/401 (4%)
Query: 97 LALSRLGIYIPLGGVNREAF------VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPF 150
L + RLGIYIP+ GVN +A+ +G LLS D F+GG R I ++ + P+
Sbjct: 25 LIVFRLGIYIPVPGVNLKAWGTAFSQMGTGAAGGLLSFYDVFTGGAFRRFSIFAMSVTPY 84
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL-RPYV 209
INA I+ QLL+ + P L++L K EGE GRKK + TR +V +Q L R +
Sbjct: 85 INASIILQLLSSVIPSLKELLK-EGEEGRKKFQRITRNLTVILGALQGFVVSFGLARSFE 143
Query: 210 NDFSTD-WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
N W T ++ +TL G+ F +IG+RI++ +GNG S+LIF I++ PA F
Sbjct: 144 NVLVIPLWTFTLLSTITLLAGTMFLLWIGDRITEKGIGNGISVLIFAGIVARYPAYFRTA 203
Query: 267 VAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
V +I L ++ L+V+GI+YVQ+AER+I + YASR R S ++P
Sbjct: 204 VLGGLNIFEWIFLLGVMF---LMVIGIIYVQQAERRIVVQYASRMVGRRIYGGTSTHIPI 260
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYY 386
KVN SGV+PIIF + +++P +A+FT LK +P + +LI FF Y+
Sbjct: 261 KVNHSGVIPIIFGWAIVSIPVGIAQFTNSQTLKSLFSMTSP---LIITIYAVLIFFFTYF 317
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
Y+ + DP D+++ +K G IP +RPGK T ++ VL+RI+ +G++FL I+A P ++
Sbjct: 318 YSVVVFDPKDIAQNIKSYGGYIPGIRPGKPTEQYITRVLNRITFVGALFLVIIALVPYLV 377
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ T ++ + G GTS LI VG A D A++++A +I + Y+
Sbjct: 378 QGVTGVSIWLG--GTSALIAVGVALDIAQQMEAHLIMRNYE 416
>gi|375110351|ref|ZP_09756576.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|397171443|ref|ZP_10494847.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
gi|374569593|gb|EHR40751.1| preprotein translocase subunit SecY [Alishewanella jeotgali KCTC
22429]
gi|396086906|gb|EJI84512.1| preprotein translocase subunit SecY [Alishewanella aestuarii B11]
Length = 442
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 248/417 (59%), Gaps = 16/417 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +L + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQQRGTIVEMFNMFSGGALERASVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P + +L K+EGEAG++K+ QYTRY ++ AI+Q+IG
Sbjct: 78 ALGIMPYISASIIVQLLTVMHPAMAEL-KKEGEAGKRKINQYTRYGTLALAILQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + T+V L G+ F ++GE+I++ +GNG SLLIFT I++
Sbjct: 137 GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIVAGF 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q D +++ L I + I + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGQTIEQARQGDLHFLLLVAIGVIVIAITWFVVFFERGQRRIVVNYAKRQQGRQVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAA--LKKAAVALNPGGSFY 372
+S++LP KVN +GV+P IF++S + PGT+A + G+ A L++ A+ L+PG Y
Sbjct: 257 AQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGMVANFLQELALTLSPGQPLY 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G
Sbjct: 317 MMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLAG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 377 ALYITFICLVPEFMMVAWNVQFY--FGGTSLLIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|148982231|ref|ZP_01816657.1| protein translocase subunit SecY [Vibrionales bacterium SWAT-3]
gi|407070219|ref|ZP_11101057.1| preprotein translocase subunit SecY [Vibrio cyclitrophicus ZF14]
gi|417949233|ref|ZP_12592371.1| preprotein translocase subunit SecY [Vibrio splendidus ATCC 33789]
gi|145960593|gb|EDK25946.1| protein translocase subunit SecY [Vibrionales bacterium SWAT-3]
gi|342808627|gb|EGU43776.1| preprotein translocase subunit SecY [Vibrio splendidus ATCC 33789]
Length = 444
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 246/419 (58%), Gaps = 19/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ DQ +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFDQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQD--GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G+T+ +A Q + L ++SF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLSFAVIYF-VVFMERGQRRIVVNYAKRQQGRKVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGS 370
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 257 AAQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQP 316
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTL 376
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 377 AGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|260772116|ref|ZP_05881033.1| preprotein translocase SecY subunit [Vibrio metschnikovii CIP
69.14]
gi|260612983|gb|EEX38185.1| preprotein translocase SecY subunit [Vibrio metschnikovii CIP
69.14]
Length = 444
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 244/420 (58%), Gaps = 17/420 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R
Sbjct: 17 GELKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIIEMFNMFSGGALERAS 76
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 77 ILALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 202 VLYLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++
Sbjct: 136 ATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVA 195
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ G T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 196 GLPSAIGHTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKV 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGG 369
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 256 FAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESQWFGWLTDVSLALSPGQ 315
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R++
Sbjct: 316 PLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTARYIDKVMTRLT 375
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 376 LAGALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSNQYDSV 433
>gi|365885456|ref|ZP_09424457.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 375]
gi|365285936|emb|CCD96988.1| Preprotein translocase secY subunit [Bradyrhizobium sp. ORS 375]
Length = 443
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 246/432 (56%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGEAGRKMLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQ+ G + L V D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LP++ + Q GL I+I + V+ IV+++ A+
Sbjct: 183 GIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIIMAVAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+++LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|261250397|ref|ZP_05942972.1| preprotein translocase SecY subunit [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|323492139|ref|ZP_08097301.1| preprotein translocase subunit SecY [Vibrio brasiliensis LMG 20546]
gi|417953708|ref|ZP_12596751.1| preprotein translocase subunit SecY [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260938966|gb|EEX94953.1| preprotein translocase SecY subunit [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|323313700|gb|EGA66802.1| preprotein translocase subunit SecY [Vibrio brasiliensis LMG 20546]
gi|342816824|gb|EGU51717.1| preprotein translocase subunit SecY [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 444
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|188996219|ref|YP_001930470.1| preprotein translocase subunit SecY [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931286|gb|ACD65916.1| preprotein translocase, SecY subunit [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 430
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/416 (36%), Positives = 250/416 (60%), Gaps = 19/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L K L L L++ RLG +IP+ G+N E + + + +L + + FSGG +GR I
Sbjct: 14 LRNKILFTLIMLSVYRLGTHIPVPGINSETLLHYFNSSGGALFNIYNLFSGGALGRFSIF 73
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LG++P+I+A I+ QLL + P L+ LQK EG+ GR K+ QYTRY ++ A Q++G +
Sbjct: 74 ALGVMPYISASIIMQLLTAVIPSLERLQKEEGDYGRWKISQYTRYLTIAIAGFQSLGLSI 133
Query: 204 YLRPYVND-------FSTDW-VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+L + S W V+ + ++T G+ F +IGE+I++ +GNG S++I I
Sbjct: 134 WLSNLKTEAGASLISISPFWFVILTTVIVTTGTVFLMWIGEKITEFGIGNGISMIILAGI 193
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYTS 313
++ + + +T E + G L ++ I++++ GIVY+QEAER+IPI++A R S
Sbjct: 194 VAGIIPAILKTY-ELLKVGELSILTLLLAILIIVLVVAGIVYIQEAERRIPIHHARRSIS 252
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAV-ALNPGGSF 371
+ Q ++YLPFK+N SGV+PIIF+ + L P T+A+ F G + + + V L+P
Sbjct: 253 ITN--QSASYLPFKLNPSGVIPIIFAVAILMFPATIAQFFAGHSEIARIIVDYLSPQSYV 310
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y + LI FF Y+YT + ++P D+++ L++ GA IP VR G T +L VL+R+
Sbjct: 311 YFALYVGLIIFFAYFYTAILINPVDIADNLRKSGAFIPGVRAGTQTVEYLNYVLTRLVFA 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GS+FLA++A P ++ + ++ + F GTS LI+V A DT +++A + +KY+
Sbjct: 371 GSIFLAVIAVLPMILIKLLNVPFY--FGGTSALIVVVVALDTIHQIEAYLAMKKYE 424
>gi|319404405|emb|CBI78008.1| translocase SecY subunit precursor [Bartonella rochalimae ATCC
BAA-1498]
Length = 448
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 248/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++FG F + L + L L + R G YI L G+N + + ++
Sbjct: 4 AAEQLVSNMNFGAFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDVLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIVPSLEAL-KKEGEFGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + +++V L G+ F ++GE+
Sbjct: 123 YTRYMTVILAILQAFGIAVALETGIGTGLQIVIEPGIIFRISAVISLVGGTIFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ +L++ IV+V
Sbjct: 183 ITSRGIGNGISLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIVVVAVLIIGVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++ P K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRIIIQYPKRQVGNQMFQGDMSHFPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + L+ G Y+ L+AFF ++YT + P D +EQLKR IP +RPG
Sbjct: 303 PQWVQNISFFLSHGQPLYMIVYAALMAFFCFFYTAIVFSPSDTAEQLKRHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + T H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVIGAIYIILICLLPEFMISTLHIPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +YK +
Sbjct: 421 AQIQGSLVAHQYKGL 435
>gi|418425394|ref|ZP_12998486.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
gi|387716957|gb|EIK04994.1| preprotein translocase subunit secY [Staphylococcus aureus subsp.
aureus VRS1]
Length = 430
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 246/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+Q + +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQCSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>gi|313673448|ref|YP_004051559.1| protein translocase subunit SecY [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940204|gb|ADR19396.1| protein translocase subunit secY/sec61 alpha [Calditerrivibrio
nitroreducens DSM 19672]
Length = 438
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 240/420 (57%), Gaps = 17/420 (4%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGG 136
D F P L + L L L + R+G +IP G+N A + S +L D F+GG
Sbjct: 7 DIFSVPELRKRILFTLFLLIVYRIGTHIPTPGINSTALTEFFARQSGNILGFFDMFTGGA 66
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ RL +C LG++P+I+A I+ +LLA ++P L +L K++G GR K+ +YTRY +V +++
Sbjct: 67 LSRLTVCGLGVMPYISASIIMELLAVVSPYLAEL-KKQGSEGRAKITKYTRYGTVLISMI 125
Query: 197 QAIGQVLYLRPYVNDFSTD------WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTS 248
Q G + L + W +T LTL G+ F ++GE+I++ +GNG S
Sbjct: 126 QGTGIAIGLEGMTSPTGASVVIYPGWGFRIITALTLTAGTIFLMWLGEKITEKGIGNGMS 185
Query: 249 LLIFTSIISYLPASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEAERKIPIN 306
++IF I++ +P + T+ Q G + L I++ + + GIV+V+ A R+IPI
Sbjct: 186 MIIFAGIVAAIPNAVTNTL-RLLQTGELQILTLVAILVIVVAVTAGIVFVEAASRRIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
Y R G ++YLP K+N+SGV+PIIF+ S ++ P TLA F+G +K+ L+
Sbjct: 245 YIKRGAVGIRGNVATSYLPLKLNTSGVIPIIFAASIISFPSTLASFSGSELIKRVGFYLS 304
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P Y LLI FF Y+YT + +P D++E ++R G IP RPG +TA F+ LS
Sbjct: 305 PSHFLYYLLYALLIVFFCYFYTSIIFNPTDIAENIQRSGGVIPGKRPGSNTAEFIDYTLS 364
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++ G+++L I+A P VI + ++ + F GTSVLI++G + D K+++ +I+ Y
Sbjct: 365 RLTFAGAIYLTIVAIMPQVILKFFNVPFY--FGGTSVLIVIGVSMDVVNKIESHLITHNY 422
>gi|323495524|ref|ZP_08100598.1| preprotein translocase subunit SecY [Vibrio sinaloensis DSM 21326]
gi|323319405|gb|EGA72342.1| preprotein translocase subunit SecY [Vibrio sinaloensis DSM 21326]
Length = 444
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYDSV 433
>gi|254785099|ref|YP_003072527.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
gi|237685019|gb|ACR12283.1| preprotein translocase, SecY subunit [Teredinibacter turnerae
T7901]
Length = 441
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 260/427 (60%), Gaps = 22/427 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGICSLG 146
KFL L + + RLG +IP+ G++ E A + N +Q ++L + FSGG + R+ I +LG
Sbjct: 17 KFLFLA--IVVYRLGTHIPVPGIDPEQVAQLFNQNQGTILGMFNMFSGGALERMSILALG 74
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL- 205
I+P+I+A I+ Q+++ + P L+ L K+EGE+GR+K+ QYTRY +V A VQA V +
Sbjct: 75 IMPYISASIIMQMMSSVTPSLEAL-KKEGESGRRKISQYTRYLTVALATVQAFVMVAGMS 133
Query: 206 ---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
Y + L +VT L GS F ++GE++++ +GNG S+LIF I++ LP++
Sbjct: 134 GQGMAYAGMPVFSFYLIAVTSLVTGSVFMMWLGEQVTERGIGNGISMLIFAGIVAGLPSA 193
Query: 263 FGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS-RSG-GLQ 319
G+ A Q D + + L ++ + + +V +V ++ +R+I I YA R + R G G
Sbjct: 194 VGQAFESARQGDLHVLMLLALLFAAVAIVWFVVRMERGQRRITIQYARRQAAGRMGQGPA 253
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------LKKAAVALNPGGSFY 372
++++LP K+N +GV+P+IF++S L P ++A++ G A+ L++ A+ + PG
Sbjct: 254 QTSHLPLKINMAGVIPVIFASSILLFPASIAQWFGNASEGKAAEILQEVALMIGPGQPLN 313
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+LI F + YT + +P +V++ LKR GA IP +RPG+ +A ++ VL+R++V+G
Sbjct: 314 FVIFAVLIVAFCFIYTAMMYNPKEVADNLKRGGAYIPGIRPGEQSAKYIDNVLTRLTVVG 373
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EF 491
SV++A +A P + + ++ + G GTS+LI+V D +VQ+ ++S +Y ++ +
Sbjct: 374 SVYIAAVALLPQFLMVSANVPFYLG--GTSLLIVVVVVMDFMSQVQSHLMSHQYDSVMKK 431
Query: 492 YDIDSYG 498
++ SYG
Sbjct: 432 ANLQSYG 438
>gi|423480274|ref|ZP_17456964.1| preprotein translocase subunit secY [Bacillus cereus BAG6X1-2]
gi|401149279|gb|EJQ56754.1| preprotein translocase subunit secY [Bacillus cereus BAG6X1-2]
Length = 433
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITSKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|423485429|ref|ZP_17462111.1| preprotein translocase subunit secY [Bacillus cereus BtB2-4]
gi|423491154|ref|ZP_17467798.1| preprotein translocase subunit secY [Bacillus cereus CER057]
gi|423502050|ref|ZP_17478667.1| preprotein translocase subunit secY [Bacillus cereus CER074]
gi|423597019|ref|ZP_17573029.1| preprotein translocase subunit secY [Bacillus cereus VD048]
gi|423602341|ref|ZP_17578341.1| preprotein translocase subunit secY [Bacillus cereus VD078]
gi|423614580|ref|ZP_17590437.1| preprotein translocase subunit secY [Bacillus cereus VD107]
gi|423665357|ref|ZP_17640496.1| preprotein translocase subunit secY [Bacillus cereus VDM022]
gi|423671579|ref|ZP_17646583.1| preprotein translocase subunit secY [Bacillus cereus VDM034]
gi|423672617|ref|ZP_17647556.1| preprotein translocase subunit secY [Bacillus cereus VDM062]
gi|401151444|gb|EJQ58895.1| preprotein translocase subunit secY [Bacillus cereus CER074]
gi|401162079|gb|EJQ69438.1| preprotein translocase subunit secY [Bacillus cereus CER057]
gi|401218196|gb|EJR24880.1| preprotein translocase subunit secY [Bacillus cereus VD048]
gi|401225880|gb|EJR32424.1| preprotein translocase subunit secY [Bacillus cereus VD078]
gi|401237424|gb|EJR43876.1| preprotein translocase subunit secY [Bacillus cereus VD107]
gi|401290264|gb|EJR95959.1| preprotein translocase subunit secY [Bacillus cereus VDM022]
gi|401291968|gb|EJR97633.1| preprotein translocase subunit secY [Bacillus cereus VDM034]
gi|401311477|gb|EJS16772.1| preprotein translocase subunit secY [Bacillus cereus VDM062]
gi|402441620|gb|EJV73570.1| preprotein translocase subunit secY [Bacillus cereus BtB2-4]
Length = 433
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|13470571|ref|NP_102140.1| preprotein translocase subunit SecY [Mesorhizobium loti MAFF303099]
gi|14021313|dbj|BAB47926.1| secretion protein; SecY [Mesorhizobium loti MAFF303099]
Length = 446
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 248/437 (56%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + +G L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLESL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYL---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+VQA G + L VND + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRISTVVTLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-----IIISFILLVLGIVYV 296
+GNG SL+IF+ I++ LP R ++ + G L+T II+ I+++ IV+
Sbjct: 183 GIGNGISLIIFSGIVAGLP----RAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFF 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A F+
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTT 298
Query: 357 ALKKAA----VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
+ A +L G Y+ +I FF ++YT + +P D ++QLK+ IP R
Sbjct: 299 NMPAWASTILASLGHGQPLYMAFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L ++ P + T + + G GTS+LI+V D
Sbjct: 359 PGERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+ +Y+ +
Sbjct: 417 TVAQIQGHLIAHQYEGL 433
>gi|288942052|ref|YP_003444292.1| preprotein translocase subunit SecY [Allochromatium vinosum DSM
180]
gi|288897424|gb|ADC63260.1| preprotein translocase, SecY subunit [Allochromatium vinosum DSM
180]
Length = 450
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 240/416 (57%), Gaps = 19/416 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ + LLG L + R+G +IP+ GVN EA DQN S+L + FSGG + R + +LG
Sbjct: 24 RLMFLLGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERASLFALG 83
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A I+ QL+ + P+L+ L K+EGEAGR+K+ QYTRY +V A QAIG + L+
Sbjct: 84 VMPYISASIIVQLMTAVVPQLEQL-KKEGEAGRRKITQYTRYGTVFLATFQAIGISMALQ 142
Query: 207 -------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
V +V T+ L G+ F ++GE+I++ +GNG S++IF I++ L
Sbjct: 143 GQTAGGSALVAHSGVGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISMIIFGGIVAGL 202
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
PA+ G T+ E + G LA + + + L + +V+V+ +R+I +NYA R R
Sbjct: 203 PAALGGTL-ELARTGEMNALAVLALFAMALAVTAFVVFVERGQRRITVNYARRQQGRKMM 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTL ++ G + + L PG Y+
Sbjct: 262 QAQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSSEDLRWIADITSKLAPGEPVYV 321
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L + + ++ LKR GA IP +RPG+ TA ++ V++R++ G+
Sbjct: 322 LLYASAIIFFCFFYTALVFNAKETADNLKRSGAFIPGIRPGEQTARYIDGVMTRLTAAGA 381
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 382 IYITAVCLLPEFLIVGYNVPFY--FGGTSLLIVVVVVMDFMAQVQAHLMSHQYEGL 435
>gi|229009639|ref|ZP_04166865.1| Preprotein translocase subunit secY [Bacillus mycoides DSM 2048]
gi|229131138|ref|ZP_04260050.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST196]
gi|229165118|ref|ZP_04292913.1| Preprotein translocase subunit secY [Bacillus cereus AH621]
gi|228618381|gb|EEK75411.1| Preprotein translocase subunit secY [Bacillus cereus AH621]
gi|228652351|gb|EEL08276.1| Preprotein translocase subunit secY [Bacillus cereus BDRD-ST196]
gi|228751661|gb|EEM01461.1| Preprotein translocase subunit secY [Bacillus mycoides DSM 2048]
Length = 425
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|357058899|ref|ZP_09119745.1| preprotein translocase [Selenomonas infelix ATCC 43532]
gi|355373245|gb|EHG20566.1| preprotein translocase [Selenomonas infelix ATCC 43532]
Length = 418
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 237/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R
Sbjct: 185 ALPKNIG-TIYAYVKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPITYAKRLVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G S+++PFKVN +GV+PIIF++S L P T+A+F + +K AA L G
Sbjct: 244 VGSGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVPWVKTAAAYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVLMIIFFTYFYTSVTVKITDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ T++ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNMVAGATNIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 414
>gi|296131856|ref|YP_003639103.1| preprotein translocase subunit SecY [Thermincola potens JR]
gi|296030434|gb|ADG81202.1| preprotein translocase, SecY subunit [Thermincola potens JR]
Length = 422
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 245/426 (57%), Gaps = 24/426 (5%)
Query: 73 DSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLS 127
SS+ GD K K L L + R+G +IP+ G+N A ++Q SLL
Sbjct: 6 KSSLKLGDLRK-----KILFTLAMFVVFRIGAHIPVPGINHTA----IEQLIKGGGSLLG 56
Query: 128 TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTR 187
D SGG R I ++ I P+INA I+ QLL + PKL+ L K EGE GRKK+ QY R
Sbjct: 57 FFDVISGGAFKRFSIFAMSITPYINASIIMQLLTVVIPKLEQLSK-EGEEGRKKITQYIR 115
Query: 188 YASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
Y +V +Q++G LR N +++ ++TL T G+AF ++GE+I++ +G
Sbjct: 116 YGTVVLGFIQSLGMAFTLRAAGALENPSFGSYMIIAITL-TAGTAFLMWLGEQITEKGIG 174
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERK 302
NG SL+IF I++ +P + EA + G N + + ++I L++ +V V E +R+
Sbjct: 175 NGISLIIFAGIVAGIPGGL-YNIYEAVRVGTVNPLSVVLLVIVAALVIAAVVAVNEGQRR 233
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA 362
IP+ YA R R +S ++P KVN +GV+PIIF++S L P T+A F A K
Sbjct: 234 IPVQYAKRVVGRRVYGGQSTHIPLKVNQAGVIPIIFASSILMFPTTIANFFPNNAFSKWI 293
Query: 363 VALNPGGSF-YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
++ GS + LLI FF Y+YT + +P DV++ +K+ G IP +RPG+ TA +L
Sbjct: 294 NSVFAWGSVSHSIMYALLIIFFTYFYTAITFNPMDVADNMKKYGGFIPGLRPGRPTAEYL 353
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
+L+RI++ G+VFLA++A PA+I T + F GTS+LI+VG A +T +++++ +
Sbjct: 354 DKILTRITLSGAVFLALIAILPAIILGATKIPNIY-FGGTSLLIVVGVALETMKQIESHL 412
Query: 482 ISQKYK 487
+ + Y+
Sbjct: 413 LMRHYQ 418
>gi|90414976|ref|ZP_01222938.1| preprotein translocase SecY [Photobacterium profundum 3TCK]
gi|90323915|gb|EAS40515.1| preprotein translocase SecY [Photobacterium profundum 3TCK]
Length = 438
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 247/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKTRLLFVLGAILIFRAGSFVPIPGIDAAVLADLFEQQKGTVIELFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGESGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + +V L G+ F ++GE+I++ +GNG S++IFT I++ L
Sbjct: 138 GLPSMIPGLVINPGLGFYFVAVVSLITGTMFLMWLGEQITERGIGNGISVIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q ++ L +I ISF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIAVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNENLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 MYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYESV 430
>gi|423393417|ref|ZP_17370643.1| preprotein translocase subunit secY [Bacillus cereus BAG1X1-3]
gi|423421704|ref|ZP_17398793.1| preprotein translocase subunit secY [Bacillus cereus BAG3X2-1]
gi|401096823|gb|EJQ04860.1| preprotein translocase subunit secY [Bacillus cereus BAG3X2-1]
gi|401629524|gb|EJS47337.1| preprotein translocase subunit secY [Bacillus cereus BAG1X1-3]
Length = 433
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|312144228|ref|YP_003995674.1| preprotein translocase subunit SecY [Halanaerobium
hydrogeniformans]
gi|311904879|gb|ADQ15320.1| preprotein translocase, SecY subunit [Halanaerobium
hydrogeniformans]
Length = 422
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 244/411 (59%), Gaps = 15/411 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVN-----REAFVGNLDQNSLLSTLDSFSGGGIGRL 140
L K L +L +A+ RLG +IP+ GV+ F G L LD F+GG +
Sbjct: 14 LRNKVLFVLAMMAVYRLGAHIPVPGVDVALLQERLFAGQF--GGALDFLDLFAGGALSNF 71
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I ++ I P+I A I+ QLL + PKL++L K +G GRKK+ QYTRY ++ A++QA G
Sbjct: 72 TIFAMSITPYITASIILQLLTVVIPKLEELSK-QGNEGRKKIAQYTRYGTIVLAVIQAFG 130
Query: 201 QVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
LY++ + + D S ++ +T LT G+AF ++GE+I+D +GNG S++IFTSIIS
Sbjct: 131 ITLYIQRFGAIPDPSIFDIVLIITSLTAGTAFLMWLGEQITDKGIGNGISIIIFTSIISR 190
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISF--ILLVLGIVYVQEAERKIPINYASRYTSRSG 316
P+ T E Q G L +I +++V GI++VQ+ ER+IP+ Y+ R R
Sbjct: 191 FPSDMYNTY-ELLQAGTISILNVMIFGVLAVIIVAGIIFVQQGERRIPVQYSKRIVGRKV 249
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
RS ++P KVN +GV+P+IF++S L PG +A + L+PG + YL
Sbjct: 250 YGGRSTHIPMKVNQAGVIPVIFASSVLLFPGIIAEVLPYDWAASISNMLSPGSTLYLVLY 309
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
L+I FF Y+YT + +P++V++ +K+ G IP +RPG+ST +L VL R+++ G++FL
Sbjct: 310 GLMILFFTYFYTAITFNPEEVADNMKKYGGFIPGIRPGRSTVRYLDKVLMRVTLAGAIFL 369
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
I+A P V+ T + F GTS+LI+ G A T ++++++++ + Y+
Sbjct: 370 TIVALLPFVMRPLTGVAI--SFGGTSLLIMTGVALQTMQQIESQLLMRHYE 418
>gi|260779483|ref|ZP_05888373.1| preprotein translocase SecY subunit [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604292|gb|EEX30596.1| preprotein translocase SecY subunit [Vibrio coralliilyticus ATCC
BAA-450]
Length = 444
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I++ ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIVVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|374298056|ref|YP_005048247.1| protein translocase subunit secY/sec61 alpha [Clostridium
clariflavum DSM 19732]
gi|359827550|gb|AEV70323.1| protein translocase subunit secY/sec61 alpha [Clostridium
clariflavum DSM 19732]
Length = 429
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 231/408 (56%), Gaps = 27/408 (6%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + RLG +IP+ G+N ++ D SGG I ++ I P+IN+ I+
Sbjct: 28 LLIFRLGSHIPVPGMNAARLKELSGMGTIFGFFDIVSGGAFSNATIFAMSITPYINSSII 87
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW 216
QLL PKL+ L K EGE GRK + +YTRY +V A +QA G LR V++
Sbjct: 88 MQLLTVAIPKLEQLAK-EGEEGRKIIARYTRYGTVILAFLQATGLYFGLRGAVSNPGIFS 146
Query: 217 VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY 276
LT T G+AF ++GE+I++ +GNG SLLIF I+S P + + G +
Sbjct: 147 YLTIALSFTAGTAFLMWLGEQITEYGIGNGISLLIFAGILSRAPQG-ALIIYSNYNMGKF 205
Query: 277 --------IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKV 328
+G+ +++ +L++ +V+VQ+AER+IP+ YA R R +S ++P KV
Sbjct: 206 GPKGILGILGVTAVLVLSLLIIALVVWVQDAERRIPVQYAKRVVGRKMYGGQSTHIPIKV 265
Query: 329 NSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY--LPTNI-------LL 379
N +GV+PIIF+ S +ALP TL F A A P ++ + + I LL
Sbjct: 266 NLAGVIPIIFAMSFIALPSTLVSFF-------APEATGPVWNYIRNMQSRIEISILSGLL 318
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ FF ++YTF+Q +P +++ +K+ G IP +RPGK T+ ++ VL+RI+ +VFLA++
Sbjct: 319 VMFFTFFYTFIQFNPIELANNIKKNGGFIPGIRPGKPTSDYITKVLNRITWFSAVFLALI 378
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
PA+++ T + FAGTSVLILVG A DT ++V+++++ + YK
Sbjct: 379 QITPAILQAITGINGVW-FAGTSVLILVGVALDTVKQVESQMLMRHYK 425
>gi|156973071|ref|YP_001443978.1| preprotein translocase subunit SecY [Vibrio harveyi ATCC BAA-1116]
gi|156524665|gb|ABU69751.1| hypothetical protein VIBHAR_00750 [Vibrio harveyi ATCC BAA-1116]
Length = 444
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 247/418 (59%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLVEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVMNQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|229027978|ref|ZP_04184131.1| Preprotein translocase subunit secY [Bacillus cereus AH1271]
gi|228733366|gb|EEL84195.1| Preprotein translocase subunit secY [Bacillus cereus AH1271]
Length = 425
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITSKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|418614966|ref|ZP_13177922.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|418634539|ref|ZP_13196933.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|420191171|ref|ZP_14697106.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|420205068|ref|ZP_14710603.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
gi|374818721|gb|EHR82868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU118]
gi|374837069|gb|EHS00642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU129]
gi|394257980|gb|EJE02879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM037]
gi|394271148|gb|EJE15646.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM015]
Length = 430
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEQSVMGYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|374992999|ref|YP_004968498.1| preprotein translocase subunit SecY [Desulfosporosinus orientis DSM
765]
gi|357211365|gb|AET65983.1| preprotein translocase, SecY subunit [Desulfosporosinus orientis
DSM 765]
Length = 428
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 242/415 (58%), Gaps = 18/415 (4%)
Query: 88 GKFLKLLGYLALS----RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G+ K +GY L R+G +IP ++R+ L ++++ +++ SGG L +
Sbjct: 13 GELRKKIGYTLLMFLIFRIGAHIPTPYIDRDTLNQMLGSGAIMNFMNTISGGSFKSLSVF 72
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+L I P+I A I+ QLL + P L+ L K EG+ GRKK+ QYTRY++VG QA G
Sbjct: 73 ALSITPYITASIILQLLTIVIPSLERLSK-EGDFGRKKITQYTRYSTVGLGFFQAFGLTY 131
Query: 204 YLRP--YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
+R V + W L +LT G++F ++GE I++ +GNG SL+IF I+S +
Sbjct: 132 GIRAAVLVPTPAMKWPTYLLIAIVLTAGTSFLMWLGEAITEKGIGNGISLIIFAGIVSRI 191
Query: 260 PASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + ++ + + G N + + +++ I + G++YVQE +R++ + YA R R
Sbjct: 192 PTAM-TSLWDMLRVGEINSLTIIGLVLIVIFVTAGVIYVQEGQRRVTVQYAKRVVGRRVY 250
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSF----Y 372
+S+++P KVN +GV+P+IF+ S LA P T+A + +A + + + GS Y
Sbjct: 251 GGQSSHIPLKVNQAGVIPVIFAISLLAFPQTIASWMPTSAFAQFVSKWFSMNGSITSIPY 310
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ LI FF Y+YT + +P DV++ LK+ G IP +RPG+ TA +L VL+RI++ G
Sbjct: 311 MLVYGALIIFFTYFYTAITFNPVDVADNLKKYGGFIPGLRPGRPTAEYLTKVLNRITLAG 370
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA++A P ++ T L F GTS+LI+VG A DT ++++++++S+ Y+
Sbjct: 371 GIFLALIAVLPTLVIGVTGLKNIY-FGGTSLLIVVGVALDTMKQIESQLMSRHYQ 424
>gi|52426083|ref|YP_089220.1| preprotein translocase subunit SecY [Mannheimia succiniciproducens
MBEL55E]
gi|52308135|gb|AAU38635.1| SecY protein [Mannheimia succiniciproducens MBEL55E]
Length = 441
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 249/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRVGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA + P L +L+K EGE+GR+K+ +YTRYA++G A +QAIG
Sbjct: 79 ALGIMPYISASIIIQLLATVYPALNELRK-EGESGRRKISKYTRYATLGLATLQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRS--G 316
P++ G+T+ +A Q ++ + +I + V +V+ + +R+I + YA R R G
Sbjct: 198 PSAIGQTIEQARQGQMHLLVLLLIAVIVFAVTYFVVFFERGQRRIKVEYAKRQQGRQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWFGEGSSLEWLTDLSMLLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LIVYAIAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 376 GLYITFVCLVPYIMMSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|27468721|ref|NP_765358.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
ATCC 12228]
gi|57867681|ref|YP_189374.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
RP62A]
gi|251812067|ref|ZP_04826540.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875362|ref|ZP_06284235.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|293368453|ref|ZP_06615077.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|417658761|ref|ZP_12308381.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|417912363|ref|ZP_12556057.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|417913241|ref|ZP_12556910.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|418326223|ref|ZP_12937414.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|418413200|ref|ZP_12986443.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
gi|418605544|ref|ZP_13168862.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|418610814|ref|ZP_13173921.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|418612889|ref|ZP_13175912.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|418617806|ref|ZP_13180695.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|418621728|ref|ZP_13184494.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|418623808|ref|ZP_13186507.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|418627185|ref|ZP_13189765.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|418628260|ref|ZP_13190814.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|419768288|ref|ZP_14294415.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771544|ref|ZP_14297596.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|420164307|ref|ZP_14671038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|420166444|ref|ZP_14673129.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|420169126|ref|ZP_14675730.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|420170714|ref|ZP_14677273.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|420173547|ref|ZP_14680039.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|420183524|ref|ZP_14689652.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|420185865|ref|ZP_14691942.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|420188219|ref|ZP_14694230.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|420195290|ref|ZP_14701084.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|420198136|ref|ZP_14703853.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|420203057|ref|ZP_14708642.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|420207126|ref|ZP_14712618.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|420209952|ref|ZP_14715385.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|420212707|ref|ZP_14718054.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|420214701|ref|ZP_14719977.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|420217020|ref|ZP_14722207.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|420221061|ref|ZP_14726015.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|420223450|ref|ZP_14728347.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|420223898|ref|ZP_14728760.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|420228375|ref|ZP_14733127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|420229966|ref|ZP_14734666.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|420232417|ref|ZP_14737055.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|420235070|ref|ZP_14739622.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|421607944|ref|ZP_16049176.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|68723610|sp|Q8CNF3.1|SECY_STAES RecName: Full=Protein translocase subunit SecY
gi|81673636|sp|Q5HM19.1|SECY_STAEQ RecName: Full=Protein translocase subunit SecY
gi|27316269|gb|AAO05444.1|AE016750_49 preprotein translocase SecY subunit [Staphylococcus epidermidis
ATCC 12228]
gi|57638339|gb|AAW55127.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
RP62A]
gi|251804401|gb|EES57058.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296127|gb|EFA88648.1| accessory Sec system translocase SecY2 [Staphylococcus epidermidis
SK135]
gi|291317411|gb|EFE57833.1| type I general secretory pathway preprotein translocase SecY
[Staphylococcus epidermidis M23864:W2(grey)]
gi|329737055|gb|EGG73310.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU045]
gi|341650937|gb|EGS74746.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU105]
gi|341656334|gb|EGS80053.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU109]
gi|365226195|gb|EHM67417.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU071]
gi|374401992|gb|EHQ73038.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU041]
gi|374403651|gb|EHQ74651.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU065]
gi|374817620|gb|EHR81799.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU117]
gi|374817690|gb|EHR81868.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU120]
gi|374828406|gb|EHR92241.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU123]
gi|374829542|gb|EHR93342.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU125]
gi|374830048|gb|EHR93837.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU126]
gi|374838312|gb|EHS01859.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU127]
gi|383360202|gb|EID37605.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361268|gb|EID38646.1| preprotein translocase, SecY subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|394231928|gb|EJD77549.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM095]
gi|394232020|gb|EJD77640.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM087]
gi|394233655|gb|EJD79252.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM088]
gi|394239766|gb|EJD85199.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM070]
gi|394239902|gb|EJD85334.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM067]
gi|394248698|gb|EJD93929.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM049]
gi|394253219|gb|EJD98232.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM040]
gi|394255148|gb|EJE00107.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM039]
gi|394263487|gb|EJE08218.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM021]
gi|394264870|gb|EJE09539.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM020]
gi|394268771|gb|EJE13325.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM018]
gi|394275600|gb|EJE19973.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM008]
gi|394277384|gb|EJE21708.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM003]
gi|394279091|gb|EJE23401.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM001]
gi|394283093|gb|EJE27270.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05005]
gi|394285291|gb|EJE29374.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04008]
gi|394287473|gb|EJE31433.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH08001]
gi|394290791|gb|EJE34637.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05001]
gi|394294959|gb|EJE38619.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH05003]
gi|394296960|gb|EJE40574.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH06004]
gi|394298438|gb|EJE42008.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH04003]
gi|394301279|gb|EJE44741.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051668]
gi|394303598|gb|EJE47016.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIH051475]
gi|406656365|gb|EKC82772.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
AU12-03]
gi|410879288|gb|EKS27138.1| preprotein translocase subunit secY [Staphylococcus epidermidis
BVS058A4]
Length = 430
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|92117118|ref|YP_576847.1| preprotein translocase subunit SecY [Nitrobacter hamburgensis X14]
gi|91800012|gb|ABE62387.1| protein translocase subunit secY/sec61 alpha [Nitrobacter
hamburgensis X14]
Length = 443
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 247/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++F F K L + LG L + RLG YIPL G++ + V N
Sbjct: 4 AAEQLAANLNFSAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPTVWQKVFNSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGGGI R+ I +L I+P+I+A I+ QLL ++PKL+ L K+EGEAGRK + Q
Sbjct: 64 ILGMFNMFSGGGIDRMAIFALNIMPYISAAIILQLLTSVSPKLEAL-KKEGEAGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L+ N + +++++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAFFQSYGIAVGLQGAGNVVTNPGMFFLVSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I I++ LP++ + Q G+ I++ ++ V+ IV+++ A+
Sbjct: 183 GIGNGISLIIMAGIVAELPSALANMLELGRQGALSTGIILIVLIMVVGVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L I LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWVNTQLGHGRPMFLILYIALIVFFTFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+V G+ +LA++ P ++ + + F GTS+LI+V DT ++V
Sbjct: 363 AEYIDYVLSRITVPGAAYLAVVCLIPEILISYAAVPFY--FGGTSLLIVVSVTMDTVQQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|417656438|ref|ZP_12306123.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|418664348|ref|ZP_13225831.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
gi|329736444|gb|EGG72712.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU028]
gi|374410646|gb|EHQ81389.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU081]
Length = 430
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|113460229|ref|YP_718286.1| preprotein translocase subunit SecY [Haemophilus somnus 129PT]
gi|112822272|gb|ABI24361.1| protein translocase subunit secY/sec61 alpha [Haemophilus somnus
129PT]
Length = 441
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 246/414 (59%), Gaps = 14/414 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ L+Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLLEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRY+++ A +QAIG
Sbjct: 79 ALGIMPYISASIIIQLLTTVHPALAEL-KKEGEAGRRKISKYTRYSTLALATIQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFSFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q ++ + +I + V +V+ + +R+I + YA R R
Sbjct: 198 PSAIGQTIEQARQGQMHLLVLLLIAVIVFAVTYFVVFFERGQRRIKVEYAKRQQGRQIVG 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
S +LP KVN +GV+P IF++S + P TL + G + L + ++ L+PG YL
Sbjct: 258 GHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSNLEWLTELSLLLHPGQPLYLI 317
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G +
Sbjct: 318 VYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIGGL 377
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 378 YITFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|229015531|ref|ZP_04172528.1| Preprotein translocase subunit secY [Bacillus cereus AH1273]
gi|229021740|ref|ZP_04178322.1| Preprotein translocase subunit secY [Bacillus cereus AH1272]
gi|228739608|gb|EEL90022.1| Preprotein translocase subunit secY [Bacillus cereus AH1272]
gi|228745754|gb|EEL95759.1| Preprotein translocase subunit secY [Bacillus cereus AH1273]
Length = 425
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLVVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|260891574|ref|ZP_05902837.1| hypothetical protein GCWU000323_02789 [Leptotrichia hofstadii
F0254]
gi|260858682|gb|EEX73182.1| preprotein translocase, SecY subunit [Leptotrichia hofstadii F0254]
Length = 438
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 233/405 (57%), Gaps = 22/405 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
+ ++R+GI+I + G+N +AF N++ L+ FSGG + R I +LGIVP+INA IV
Sbjct: 34 IMVARVGIHIAVPGINTDAFKNFQQGNAIAQFLNLFSGGAVERASIFALGIVPYINASIV 93
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-------QVLYLRPYV 209
FQLL I PK+ ++QK EG R K+ Q++RY ++ AI+Q+ G Q L L P
Sbjct: 94 FQLLGVIFPKIDEMQK-EGGKERDKITQWSRYVTIVLAIIQSFGIAVLMQNQGLVLEP-- 150
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
++L++V L+T G++F +I ERIS +GNGTS+LIF +I++ LP + ++
Sbjct: 151 ---GPKFILSTVVLITGGTSFLMWISERISIRGIGNGTSMLIFLNIVAGLPTVISQMISG 207
Query: 270 AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ----RSAYLP 325
+ L I++F++ + +V VQ AER+IPI YA + + GG Q + YLP
Sbjct: 208 LPSGMGKVLLGLSIVAFVVFIALMVIVQLAERRIPIQYAGKGSLGFGGGQSTVGKRTYLP 267
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFN 384
K+N SGVMPIIF++ +A P L LK A P G YL +LI F+
Sbjct: 268 LKINMSGVMPIIFASVLMAAPPFLVSMMKTGNLKNFLAAQFEPKGVLYLLLFAILITVFS 327
Query: 385 YYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
++YT + DPD VS+ LK+ G +IP VR GK TA +L+ V +R++ ++FL++L P
Sbjct: 328 FFYTLTIAFDPDKVSDDLKQSGGTIPTVRAGKETADYLEKVATRVTFGSAIFLSLLGIMP 387
Query: 444 AV-IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ L G GTS+LILVG A + ++ + + +K K
Sbjct: 388 NIWFGYVLKLPVMLG--GTSLLILVGTAVELLLQIDSYLAVKKMK 430
>gi|307946306|ref|ZP_07661641.1| preprotein translocase, SecY subunit [Roseibium sp. TrichSKD4]
gi|307769970|gb|EFO29196.1| preprotein translocase, SecY subunit [Roseibium sp. TrichSKD4]
Length = 443
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 248/433 (57%), Gaps = 15/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA S+++F F K L + LG L + RLG YIPL G+N EAF N Q+
Sbjct: 4 AAEQLASNLNFSAFAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPEAFGQAFNQAQSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ + K++GE GRK + Q
Sbjct: 64 IIGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPTLEQM-KKDGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWVLTSVTLLTL--GSAFTTYIGERISDL 241
YTRY +V A +QA G + L N + W + T++TL G+ F ++GE+I+
Sbjct: 123 YTRYGTVVLAALQAYGIAVGLEGAANVVTDPGWFFRASTVITLVGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEA 299
+GNG SL+IF I++ LP + T+ Q +I L II++ +++ IV+++ A
Sbjct: 183 GIGNGISLIIFAGIVAGLPTAVVSTLELGRQGALATWIILGIIILAVVVIAF-IVFMERA 241
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIA 356
+R++ I Y R +++LP K+N++GV+P IF++S L +P T++ F G
Sbjct: 242 QRRLLIQYPKRQMGNRMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATISGFNSGGGNE 301
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
L L G Y+ ++I FF ++YT + +P D ++ LK+ G IP +RPG+
Sbjct: 302 WLTTITALLGHGQPLYMVFYAVMIIFFCFFYTAIVFNPTDTADNLKKHGGFIPGIRPGER 361
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+R++V+G++++ ++ P + T + + F GTS+LI+V DT +
Sbjct: 362 TAQYIDYVLTRVTVVGAIYITLVCLLPEFLISATGVPFY--FGGTSLLIVVSVTMDTVSQ 419
Query: 477 VQAEIISQKYKNI 489
+Q +++ +Y+ +
Sbjct: 420 IQGHLLAHQYEGL 432
>gi|343508431|ref|ZP_08745774.1| preprotein translocase subunit SecY [Vibrio ichthyoenteri ATCC
700023]
gi|343511574|ref|ZP_08748733.1| preprotein translocase subunit SecY [Vibrio scophthalmi LMG 19158]
gi|343515852|ref|ZP_08752900.1| preprotein translocase subunit SecY [Vibrio sp. N418]
gi|342793939|gb|EGU29723.1| preprotein translocase subunit SecY [Vibrio ichthyoenteri ATCC
700023]
gi|342797487|gb|EGU33135.1| preprotein translocase subunit SecY [Vibrio sp. N418]
gi|342797776|gb|EGU33415.1| preprotein translocase subunit SecY [Vibrio scophthalmi LMG 19158]
Length = 444
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 245/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISVLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYDSV 433
>gi|417645736|ref|ZP_12295629.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
gi|329731201|gb|EGG67571.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU144]
Length = 430
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNITRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|228905927|ref|ZP_04069824.1| Preprotein translocase subunit secY [Bacillus thuringiensis IBL
200]
gi|228937433|ref|ZP_04100079.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228963230|ref|ZP_04124399.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228970319|ref|ZP_04130978.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976889|ref|ZP_04137301.1| Preprotein translocase subunit secY [Bacillus thuringiensis Bt407]
gi|228782859|gb|EEM31025.1| Preprotein translocase subunit secY [Bacillus thuringiensis Bt407]
gi|228789428|gb|EEM37348.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796488|gb|EEM43927.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228822266|gb|EEM68248.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228853742|gb|EEM98502.1| Preprotein translocase subunit secY [Bacillus thuringiensis IBL
200]
Length = 425
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|410454369|ref|ZP_11308308.1| preprotein translocase subunit SecY [Bacillus bataviensis LMG
21833]
gi|409932184|gb|EKN69151.1| preprotein translocase subunit SecY [Bacillus bataviensis LMG
21833]
Length = 431
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 252/426 (59%), Gaps = 32/426 (7%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G + K + L L + RLG +IP+ VN + + N D+ S+ L++F GG + + I
Sbjct: 12 GDIRRKIIFTLLMLVVFRLGTFIPVPNVNADV-LANQDKLSVFGILNTFGGGALKQFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + PK + K +GE+GR+K+ Q TRY ++ +QA+G
Sbjct: 71 AMGIMPYITASIIIQLLQMDVVPKFTEWSK-QGESGRRKIAQITRYFTIVLGFIQALG-- 127
Query: 203 LYLRPYVNDFST----------DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+ N+ ++ ++L +VTL T G+AF ++GE+I++ +GNG S++IF
Sbjct: 128 --MSYGFNNLASGQLIENPGIGTYLLIAVTL-TAGTAFLMWLGEQITEKGVGNGISIIIF 184
Query: 253 TSIISYLPASFGRTVAEAFQDGN---YIGLATIII---SFILLVLGIVYVQEAERKIPIN 306
I++ +P+ + + F++ ++ + T+++ + I +V+G++++Q+A RKIPI
Sbjct: 185 AGIVAGMPSVINQIYVQQFENAGEAIFLRIVTVVLIALAVIAIVVGVIFIQQANRKIPIQ 244
Query: 307 YASRYTS-RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
YA R + R+ +S ++P KVN++GV+P+IF+ S + P T+A F G + +
Sbjct: 245 YAKRVVAGRNPVGGQSTHMPLKVNAAGVIPVIFAVSFIVTPRTIASFFGT---NDVTLWI 301
Query: 366 NPGGSFYLPTNI----LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
N + P + +LI F Y+Y F+Q++P+ +E L++Q IP +RPGKST +L
Sbjct: 302 NKNLDYSHPIGMTLYAILIIAFTYFYAFIQVNPEQAAENLQKQSGYIPGIRPGKSTQEYL 361
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEI 481
VL R++ +G++FL ++A P + + +L GTS+LI+VG A DT ++++A++
Sbjct: 362 TRVLYRLTFVGAIFLTVIAVLPMLFIKIANLPQSAQIGGTSLLIVVGVALDTYKQLEAQL 421
Query: 482 ISQKYK 487
+ + YK
Sbjct: 422 VKRHYK 427
>gi|218895265|ref|YP_002443676.1| preprotein translocase subunit SecY [Bacillus cereus G9842]
gi|384184216|ref|YP_005570112.1| preprotein translocase subunit SecY [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562777|ref|YP_006605501.1| preprotein translocase subunit SecY [Bacillus thuringiensis HD-771]
gi|410672501|ref|YP_006924872.1| protein translocase subunit SecY [Bacillus thuringiensis Bt407]
gi|423364446|ref|ZP_17341936.1| preprotein translocase subunit secY [Bacillus cereus VD022]
gi|423387384|ref|ZP_17364638.1| preprotein translocase subunit secY [Bacillus cereus BAG1X1-2]
gi|423526572|ref|ZP_17503017.1| preprotein translocase subunit secY [Bacillus cereus HuB1-1]
gi|423565512|ref|ZP_17541788.1| preprotein translocase subunit secY [Bacillus cereus MSX-A1]
gi|434378775|ref|YP_006613419.1| preprotein translocase subunit SecY [Bacillus thuringiensis HD-789]
gi|452196508|ref|YP_007476589.1| Preprotein translocase secY subunit [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218541654|gb|ACK94048.1| preprotein translocase, SecY subunit [Bacillus cereus G9842]
gi|326937925|gb|AEA13821.1| preprotein translocase subunit SecY [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401072865|gb|EJP81319.1| preprotein translocase subunit secY [Bacillus cereus VD022]
gi|401193714|gb|EJR00717.1| preprotein translocase subunit secY [Bacillus cereus MSX-A1]
gi|401628967|gb|EJS46795.1| preprotein translocase subunit secY [Bacillus cereus BAG1X1-2]
gi|401791429|gb|AFQ17468.1| preprotein translocase subunit SecY [Bacillus thuringiensis HD-771]
gi|401877332|gb|AFQ29499.1| preprotein translocase subunit SecY [Bacillus thuringiensis HD-789]
gi|402455612|gb|EJV87393.1| preprotein translocase subunit secY [Bacillus cereus HuB1-1]
gi|409171630|gb|AFV15935.1| protein translocase subunit SecY [Bacillus thuringiensis Bt407]
gi|452101901|gb|AGF98840.1| Preprotein translocase secY subunit [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 433
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|27364194|ref|NP_759722.1| preprotein translocase subunit SecY [Vibrio vulnificus CMCP6]
gi|37678579|ref|NP_933188.1| preprotein translocase subunit SecY [Vibrio vulnificus YJ016]
gi|320157581|ref|YP_004189960.1| preprotein translocase secY subunit [Vibrio vulnificus MO6-24/O]
gi|27360312|gb|AAO09249.1| Preprotein translocase secY subunit [Vibrio vulnificus CMCP6]
gi|37197319|dbj|BAC93159.1| preprotein translocase subunit SecY [Vibrio vulnificus YJ016]
gi|319932893|gb|ADV87757.1| preprotein translocase secY subunit [Vibrio vulnificus MO6-24/O]
Length = 444
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSHQYESV 433
>gi|411002559|ref|ZP_11378888.1| preprotein translocase subunit SecY [Streptomyces globisporus
C-1027]
Length = 437
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 238/435 (54%), Gaps = 31/435 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNR---EAFVGNLDQNSLLSTLDSFS 133
F FK P L K L LG + + RLG +IP GV+ + + D LL + FS
Sbjct: 5 FARAFKTPDLRKKLLFTLGMIVIYRLGAHIPAPGVDYTKVQQCIDQADSGGLLGLMQMFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVAL 123
Query: 194 AIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
A++Q G V R V D S + V +T G+A ++GE I+D
Sbjct: 124 AVLQGTGLVATARSGALFQNCSVGDQIVADKSVFTTVIMVVTMTAGTAAVMWLGELITDR 183
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAER 301
+GNG S+L+F SI + P + +I AT+I+ ++V +V+V++A+R
Sbjct: 184 GIGNGMSILMFISIAATFPGALWSIKESGKLADGWIEFATVILIGFVMVGLVVFVEQAQR 243
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+G A
Sbjct: 244 RIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSGSNAGWAT 303
Query: 362 AVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
+ N Y+ LLI FF ++Y + +PD+V++ +K+ G IP +R G+ TA
Sbjct: 304 WITDNFVQQNEPIYMVAYFLLIVFFAFFYVAISFNPDEVADNMKKYGGFIPGIRAGRPTA 363
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCATD 472
+L VL+RI+ GS++LA++A P T L F G F GTS+LI+VG +
Sbjct: 364 EYLSYVLNRITWPGSLYLALIALVP-----TMALAGFGGANANFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYK 487
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYE 433
>gi|71276500|ref|ZP_00652775.1| SecY protein [Xylella fastidiosa Dixon]
gi|170729720|ref|YP_001775153.1| preprotein translocase subunit SecY [Xylella fastidiosa M12]
gi|71162677|gb|EAO12404.1| SecY protein [Xylella fastidiosa Dixon]
gi|71729646|gb|EAO31750.1| SecY protein [Xylella fastidiosa Ann-1]
gi|167964513|gb|ACA11523.1| preprotein translocase SecY subunit [Xylella fastidiosa M12]
Length = 457
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 247/428 (57%), Gaps = 24/428 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGIC 143
L + L L G L + R+G Y+P+ GVN EA + + + ++ + FSGG + R I
Sbjct: 19 LRNRLLFLFGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMFSGGALHRFSIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+L ++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A++Q L
Sbjct: 79 ALNVMPYISASIVVQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVILAVIQGGSIAL 137
Query: 204 YLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L+ V +V+ ++ LT G+ F ++GE++++ +GNG S++IF I
Sbjct: 138 ALQNQTAPGGAAVVYAPGAAFVMIAIVALTAGTVFLMWVGEQVTERGIGNGVSMIIFAGI 197
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTS 313
++ LP S +T+ +AF+ ++ +II FI+L +V+V+ R+I +NYA R
Sbjct: 198 VAGLPGSVLQTI-DAFRSDALSLISLLIIVFIVLSFTFFVVFVERGLRRITVNYARRVEG 256
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVAL 365
R+ + +S++LP K+N +GV+P IF++S LA P TL+ ++G A+ L++ A AL
Sbjct: 257 RNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTVFGAWLQRVASAL 316
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PG ++ +LI F ++YT L + ++ LK+ GA IP +RPGK+T+ ++ VL
Sbjct: 317 GPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPGKATSDYVDGVL 376
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
+R++ +GS++L I+ P ++ + + A F GTS+LI V D ++Q S +
Sbjct: 377 TRLTAVGSLYLVIVCLLPEFMQ--SRMGASFHFGGTSLLIAVVVVMDFISQIQVHQASNQ 434
Query: 486 YKNIEFYD 493
Y + F+
Sbjct: 435 YDGVSFFK 442
>gi|54307561|ref|YP_128581.1| preprotein translocase subunit SecY [Photobacterium profundum SS9]
gi|46911981|emb|CAG18779.1| putative preprotein translocase, SecY subunit [Photobacterium
profundum SS9]
Length = 438
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 247/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKTRLLFVLGAILIFRAGSFVPIPGIDAAVLADLFEQQKGTVIELFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIIVQLLTVVHPALAEL-KKEGESGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + +V L G+ F ++GE+I++ +GNG S++IFT I++ L
Sbjct: 138 GLPSMIPGLVLNPGLGFYFVAVVSLITGTMFLMWLGEQITERGIGNGISVIIFTGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATII--ISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P + G+TV +A Q ++ L +I ISF ++ +V+++ +R+I +NYA R R
Sbjct: 198 PPAIGQTVEQARQGELHVLLLLLIAVISFAVIYF-VVFMERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNENLGWLSDISLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 MLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 MYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHMMSQQYESV 430
>gi|423405146|ref|ZP_17382319.1| preprotein translocase subunit secY [Bacillus cereus BAG2X1-2]
gi|423462596|ref|ZP_17439390.1| preprotein translocase subunit secY [Bacillus cereus BAG5X2-1]
gi|423479989|ref|ZP_17456703.1| preprotein translocase subunit secY [Bacillus cereus BAG6X1-1]
gi|401130775|gb|EJQ38431.1| preprotein translocase subunit secY [Bacillus cereus BAG5X2-1]
gi|401645516|gb|EJS63171.1| preprotein translocase subunit secY [Bacillus cereus BAG2X1-2]
gi|402423973|gb|EJV56169.1| preprotein translocase subunit secY [Bacillus cereus BAG6X1-1]
Length = 433
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|372269380|ref|ZP_09505428.1| preprotein translocase, SecY subunit [Alteromonas sp. S89]
Length = 407
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 241/396 (60%), Gaps = 20/396 (5%)
Query: 119 NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAG 178
N +Q ++L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EG+AG
Sbjct: 14 NQNQGTILGLFNMFSGGALERMSILALGIMPYISASIIMQLMTAVTPSLEAL-KKEGDAG 72
Query: 179 RKKVLQYTRYASVGFAIVQAIGQVLYLR----PYVNDFSTDWVLTSVTLLTLGSAFTTYI 234
R+K+ QYTRY +V A++Q IG L Y + + + +V L G+ F ++
Sbjct: 73 RRKINQYTRYLTVFLALIQGIGMTFGLAGQNLAYSAEPAFGFYFVAVVSLVTGAVFMMWL 132
Query: 235 GERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLG 292
GE+I++ +GNG S+LIF I++ LP++ G+ +A Q +I L + I F+ L V
Sbjct: 133 GEQITERGVGNGISMLIFAGIVAGLPSAIGQAFEQARQGELHI-LMLLAIGFVALAVVYF 191
Query: 293 IVYVQEAERKIPINYASRYTSR--SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLA 350
+V ++ +R+I IN+A R R +S++LP KVN +GV+P+IF++S L P TLA
Sbjct: 192 VVVMERGQRRITINHARRQAGRYSQAPAAQSSHLPLKVNMAGVIPVIFASSILLFPATLA 251
Query: 351 RF-----TGIAA--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 403
++ GI A L+ A+ L PG + LLI FF ++YT L +P++V++ LK+
Sbjct: 252 QWFGQGGEGIGAQILQWMALQLGPGQPLNIILFALLIGFFCFFYTALMFNPNEVADNLKK 311
Query: 404 QGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSV 463
GA +P +RPG+ TA ++ +VL+R++++G+ ++A+++ P + ++ + G GTS+
Sbjct: 312 SGAYVPGIRPGEQTARYIDSVLTRLTLVGACYIALVSLLPQFLVVGLNIPFYLG--GTSL 369
Query: 464 LILVGCATDTARKVQAEIISQKYKNI-EFYDIDSYG 498
LI+V D +VQ+ ++S +Y + + ++ SYG
Sbjct: 370 LIVVVVVMDFMAQVQSHLLSHQYDGLMKKANLQSYG 405
>gi|196042424|ref|ZP_03109684.1| preprotein translocase, SecY subunit [Bacillus cereus NVH0597-99]
gi|196026743|gb|EDX65390.1| preprotein translocase, SecY subunit [Bacillus cereus NVH0597-99]
Length = 433
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWAK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNS 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
G ++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 GYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|357411713|ref|YP_004923449.1| preprotein translocase subunit SecY [Streptomyces flavogriseus ATCC
33331]
gi|320009082|gb|ADW03932.1| preprotein translocase, SecY subunit [Streptomyces flavogriseus
ATCC 33331]
Length = 439
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 247/441 (56%), Gaps = 41/441 (9%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDS 131
F FK P L K L LG + L RLG +IP+ GV+ E +DQ NSL ++
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVLYRLGAHIPVPGVSYENVQTCVDQASKGNNSLFGLVNM 64
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 FSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTV 123
Query: 192 GFAIVQAIGQVLYLR---------------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
AI+Q G V R P + F+T + V +T G+A ++GE
Sbjct: 124 ALAILQGTGLVATARSGALFSGCPVADQIVPNQSIFTT---IVMVITMTAGTAAVMWLGE 180
Query: 237 RISDLKLGNGTSLLIFTSIISYLP-ASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVY 295
I+D +GNG S+L+F SI + P A + + DG + I+I F+++ L +V+
Sbjct: 181 LITDRGIGNGMSILMFISIAASFPGALWAIKQSGKLADGWIEFITVILIGFVMVAL-VVF 239
Query: 296 VQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI 355
V++A+R++P+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+
Sbjct: 240 VEQAQRRVPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNS 299
Query: 356 AALKKAAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
A + + +Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R
Sbjct: 300 TAGWATWIQDHFVKGDHPYYIATYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIR 359
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLIL 466
G+ TA +L VL+RI+ GS++L ++A P T L F G F GTS+LI+
Sbjct: 360 AGRPTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILII 414
Query: 467 VGCATDTARKVQAEIISQKYK 487
VG +T +++++++ + Y+
Sbjct: 415 VGVGLETVKQIESQLQQRNYE 435
>gi|242243967|ref|ZP_04798410.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|416125862|ref|ZP_11596209.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|418631112|ref|ZP_13193582.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|420175801|ref|ZP_14682231.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|420176622|ref|ZP_14683030.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|420181224|ref|ZP_14687428.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|420191488|ref|ZP_14697404.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|420199195|ref|ZP_14704875.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
gi|242232600|gb|EES34912.1| preprotein translocase subunit SecY [Staphylococcus epidermidis
W23144]
gi|319400605|gb|EFV88830.1| preprotein translocase subunit secY [Staphylococcus epidermidis
FRI909]
gi|374835880|gb|EHR99476.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU128]
gi|394242488|gb|EJD87879.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM061]
gi|394246924|gb|EJD92175.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM053]
gi|394252465|gb|EJD97499.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM057]
gi|394266521|gb|EJE11153.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM023]
gi|394272351|gb|EJE16813.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
NIHLM031]
Length = 430
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 243/409 (59%), Gaps = 20/409 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-- 208
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 209 ----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ ++L +V +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S
Sbjct: 139 GQLIIEQSVMSYLLIAV-VLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLE 197
Query: 265 RTVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
+ F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 198 QFAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ 257
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNIL 378
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++
Sbjct: 258 -ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVV 316
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA
Sbjct: 317 LIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITRVLYRLTFVGSIFLAA 376
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 377 IAILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|269959709|ref|ZP_06174089.1| preprotein translocase subunit secY [Vibrio harveyi 1DA3]
gi|350530078|ref|ZP_08909019.1| preprotein translocase subunit SecY [Vibrio rotiferianus DAT722]
gi|388600302|ref|ZP_10158698.1| preprotein translocase subunit SecY [Vibrio campbellii DS40M4]
gi|424034240|ref|ZP_17773647.1| preprotein translocase, SecY subunit [Vibrio cholerae HENC-01]
gi|424048077|ref|ZP_17785633.1| preprotein translocase, SecY subunit [Vibrio cholerae HENC-03]
gi|444424499|ref|ZP_21219955.1| preprotein translocase subunit SecY [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|269835632|gb|EEZ89711.1| preprotein translocase subunit secY [Vibrio harveyi 1DA3]
gi|408873391|gb|EKM12589.1| preprotein translocase, SecY subunit [Vibrio cholerae HENC-01]
gi|408883387|gb|EKM22174.1| preprotein translocase, SecY subunit [Vibrio cholerae HENC-03]
gi|444242205|gb|ELU53720.1| preprotein translocase subunit SecY [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 444
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVMNQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|78484660|ref|YP_390585.1| preprotein translocase subunit SecY [Thiomicrospira crunogena
XCL-2]
gi|78362946|gb|ABB40911.1| protein translocase subunit secY/sec61 alpha [Thiomicrospira
crunogena XCL-2]
Length = 437
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 245/420 (58%), Gaps = 17/420 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLG 141
G L K +LG L + RLG +IP+ ++ A +Q ++L + FSGG + RL
Sbjct: 12 GGLSQKIFFVLGALIVYRLGTHIPVPLIDPVALAAMFEQQKGTILDMFNMFSGGALQRLS 71
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L+ L K++GEAGR+K+ QYTRY +V A QA+G
Sbjct: 72 ILALGIMPYISASIIMQLLTVVSPTLEQL-KKDGEAGRRKITQYTRYGTVVLATFQALGV 130
Query: 202 VLYLRPY-VNDFSTD------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+ L +N S + + +V L G+ F ++GE+I++ +GNG SL+IF
Sbjct: 131 AIALESQNINGMSVVVEPGLLFKVIAVATLVSGTIFLMWLGEQITERGIGNGISLIIFAG 190
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTS 313
I++ LP++ G T + + A ++++ + LV+ +V+V+ +R+IPI+YA R
Sbjct: 191 IVAGLPSALGGTFEQVNTGAMHAITAFVLLALVFLVIAFVVFVERGQRRIPIHYAQRMRG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGG 369
R + +LP K+N +GV+P IF++S + P TL + G A LK A ++PG
Sbjct: 251 RKLYGGQEGHLPLKLNMAGVIPPIFASSIILFPATLGGWFGTAENMGWLKDIATTMSPGQ 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y+ + I FF ++YT + +P++ ++ L++ GA IP +RPG+ TA + T++SR++
Sbjct: 311 PLYILFYAMAIIFFCFFYTAIVFNPNETADNLRKSGAYIPGIRPGQQTARRIDTIMSRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ G++++ ++ P + ++ + F GTS+LI+V D +QA + S +Y+++
Sbjct: 371 LAGAIYITLVCLLPEFLILYWNVPFY--FGGTSLLIIVIVVMDFMTNIQAHMQSGQYESM 428
>gi|392549259|ref|ZP_10296396.1| preprotein translocase subunit SecY [Pseudoalteromonas rubra ATCC
29570]
Length = 442
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 239/418 (57%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAEFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL I+P + +L K+EGE GRKK+ QYTRY ++ A Q+IG
Sbjct: 78 ALGIMPYISASIIMQLLTHIHPAMIEL-KKEGEQGRKKISQYTRYGTLVLATFQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 NLPNMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P++ G T AE + G+ LA ++IS I+ + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGST-AEMARQGDLNVLALVVISVIVFAVTYLVVFFERGQRRIVVNYAKRQQGRQVF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA------LKKAAVALNPGGSF 371
+S +LP KVN +GV+P IF++S + PGT+A + G L+ + L PG
Sbjct: 256 AAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADFLQAVSAVLTPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 316 YAMVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLA 375
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 376 GALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|86135788|ref|ZP_01054367.1| preprotein translocase SecY [Roseobacter sp. MED193]
gi|85826662|gb|EAQ46858.1| preprotein translocase SecY [Roseobacter sp. MED193]
Length = 454
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 239/420 (56%), Gaps = 25/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++ + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDANALRNFMEAAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EG G+KK+ QYTRY +V A QA G +
Sbjct: 83 ALGIMPYISASIIVQLLTSMVPALEQL-KKEGAQGQKKINQYTRYGTVALATAQAYGLAV 141
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D +TD + + + L G+ F ++GE+I+ LGNG SL+IF II+ +
Sbjct: 142 SLE--AGDLATDPGMYFRMACMITLVGGTMFLMWLGEQITQRGLGNGISLIIFVGIIAEV 199
Query: 260 PASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGI----VYVQEAERKIPINYASRYTSR 314
PAS +A+ F G ++ +II IL+V+ + V+++ A RKI I Y R
Sbjct: 200 PAS----IAQFFASGRSGAISPAVIIGVILMVIAVIMFVVFMERALRKIHIQYPRRQVGM 255
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA----ALKKAAVALNPGGS 370
S++LP KVN +GV+P IF++S L LP T++ F+ A + PG
Sbjct: 256 KVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPTTISAFSSGATNGPVMSWLLANFGPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + +I FF Y+YTF + P+DV+ LK Q +P +RPGK TA +++ V++R+
Sbjct: 316 LYLLFFVSMIVFFAYFYTFNVAFKPEDVANNLKNQNGFVPGIRPGKKTAEYIEYVVNRVL 375
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
VLGS++LA++ P V+ + F GTSVLI+V DT ++ Q+ +++ +Y+ +
Sbjct: 376 VLGSLYLALVCLLPEVLRGQFAFPVY--FGGTSVLIVVSVTMDTIQQAQSHLLAHQYEGL 433
>gi|90417747|ref|ZP_01225659.1| preprotein translocase, SecY subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90337419|gb|EAS51070.1| preprotein translocase, SecY subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 447
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 249/437 (56%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA ++++F F K L + LG L + RLG YIP+ G+N +A Q S
Sbjct: 4 AAEQLAANLNFSAFAKAEDLKKRIWFTLGALLVYRLGTYIPMPGINPDALAQAFQQQSTG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVGRMAIFALGIMPYISASIIIQLMTSVIPSLEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQV--LYLRP-YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A VQA G L +P V D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLATVQAYGIAAGLQTQPGIVVDPGIFFQVSAVITLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFIL-----LVLGIVYV 296
+GNG SL+IF I+++LP++ +A + G L+T +I ++ + IV+
Sbjct: 183 GIGNGISLIIFAGIVAHLPSA----IANLLELGRTGALSTAVILLVIVVAVACIAVIVFF 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T+A FT A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPPIFASSLLLLPVTIANFTSTA 298
Query: 357 ALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A A L G Y+ LIAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 DLPGWASATIASLGHGQPLYMAMYAGLIAFFAFFYTAVVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L I+ P + + + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVVGAIYLVIICLLPEFLISAVGVPFYLG--GTSLLIVVSVTMD 416
Query: 473 TARKVQAEIISQKYKNI 489
T +VQ +++ +Y+ +
Sbjct: 417 TVAQVQGHLLAHQYEGL 433
>gi|408420910|ref|YP_006762324.1| preprotein translocase subunit SecY [Desulfobacula toluolica Tol2]
gi|405108123|emb|CCK81620.1| SecY: preprotein translocase, subunit Y [Desulfobacula toluolica
Tol2]
Length = 439
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 252/422 (59%), Gaps = 15/422 (3%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFS 133
+ + FK P L K L L + R+GI++P GVN A + +L S + FS
Sbjct: 5 SYQNLFKLPELKRKIFITLALLFVYRIGIHVPTPGVNGAALASFFASAEGTLFSMFNMFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + RL I +LGI+P+I+A I+ +L+ + P L+ L K+EG+AGRKK QYTRY +V
Sbjct: 65 GGALERLSIFALGIMPYISASIILELMTVVVPHLEQL-KKEGDAGRKKKTQYTRYGTVVL 123
Query: 194 AIVQAIGQVLYLRPYVNDFST------DWVLTSVTLLTL--GSAFTTYIGERISDLKLGN 245
+I+Q +G + L + W VT++TL G++F ++GE+I++ +GN
Sbjct: 124 SIIQGLGISVGLESMTSPAGIAIVPYPGWGFRLVTIITLTAGTSFIMWLGEQITERGIGN 183
Query: 246 GTSLLIFTSIISYLPASFGRTVA-EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIP 304
G SL+IF I++ +P + G T+ + + +I+ ++++ I+Y+++A+R+IP
Sbjct: 184 GISLIIFAGIVARMPIAMGNTIRLMTTGEMGIFAIIILIVLMVIVIAAIIYMEQAQRRIP 243
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
++YA R R ++++LP K+N++GV+P IF++S + P TLA+F + +K A
Sbjct: 244 VHYAKRVVGRKMYGGQTSHLPLKINTAGVIPPIFASSIIMFPTTLAQFINLPIMKTVAAM 303
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+PG +Y I I FF ++YT +Q +P+DV+E +K+ G IP +RPGK T+ ++ V
Sbjct: 304 FSPGTIWYYLLYIGFIIFFCFFYTAVQFNPEDVAENMKKNGGYIPGIRPGKRTSEYIDKV 363
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI+V G+++++ + P + ++ + F GT++LI+VG + DT ++++ +I+
Sbjct: 364 LTRITVGGAIYVSAVCVLPTFLMSKFNIPFY--FGGTALLIVVGVSIDTISQIESHLITG 421
Query: 485 KY 486
Y
Sbjct: 422 NY 423
>gi|395777971|ref|ZP_10458484.1| preprotein translocase, SecY subunit [Bartonella elizabethae
Re6043vi]
gi|423715897|ref|ZP_17690118.1| preprotein translocase, SecY subunit [Bartonella elizabethae F9251]
gi|395418280|gb|EJF84607.1| preprotein translocase, SecY subunit [Bartonella elizabethae
Re6043vi]
gi|395429199|gb|EJF95273.1| preprotein translocase, SecY subunit [Bartonella elizabethae F9251]
Length = 448
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVIPSLETL-KKEGEVGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALESGIGTGLQIVVEPGLMFRVSSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ +L++ IV++
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIAIVVIAVLVIGLIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWMQTISYSLGHGQPLYMIVYAFLMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISAFQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|344344824|ref|ZP_08775683.1| preprotein translocase, SecY subunit [Marichromatium purpuratum
984]
gi|343803518|gb|EGV21425.1| preprotein translocase, SecY subunit [Marichromatium purpuratum
984]
Length = 450
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 241/415 (58%), Gaps = 17/415 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L +LG L + R+G +IP+ GVN EA DQN S+L + FSGG + R + +LG
Sbjct: 24 RLLFVLGALLVYRIGTFIPVPGVNPEALAILFDQNQGSILDMFNMFSGGALERASLFALG 83
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL+ + PKL+ L K+EGE+GR+K+ QYTRY +V A QAIG + L+
Sbjct: 84 IMPYISASIIMQLMTAVLPKLEQL-KKEGESGRRKITQYTRYGTVVLATFQAIGISMALQ 142
Query: 207 -------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
V+ +V T+ L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 143 GQTAGGSALVSHAGPGFVFTATVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 202
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G T+ A + N + + + + + +V+V+ +R+I +NYA R R
Sbjct: 203 PSALGGTLELARTGEMNSLAVLALFALALAVTAFVVFVERGQRRITVNYARRQQGRRMMQ 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP K+N +GV+P IF++S + PGTL ++ G + L L+PG Y+
Sbjct: 263 AQSTHLPLKLNMAGVIPPIFASSIILFPGTLGQWFGSNEDLRWLADITAKLSPGEPVYVL 322
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L + + ++ LKR GA IP +RPG+ TA ++ TV++R++ G++
Sbjct: 323 FYATAIIFFCFFYTALVFNAKETADNLKRSGAFIPGIRPGEQTARYIDTVMTRLTAAGAI 382
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D ++QA ++S +Y+ +
Sbjct: 383 YITAVCLLPEFLIVGYNVPFY--FGGTSLLIVVVVVMDFMAQIQAHLMSHQYEGL 435
>gi|229170981|ref|ZP_04298582.1| Preprotein translocase subunit secY [Bacillus cereus MM3]
gi|228612521|gb|EEK69742.1| Preprotein translocase subunit secY [Bacillus cereus MM3]
Length = 425
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + ++ ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGGNG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPNHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|328543378|ref|YP_004303487.1| Preprotein translocase, SecY subunit [Polymorphum gilvum
SL003B-26A1]
gi|326413123|gb|ADZ70186.1| Preprotein translocase, SecY subunit [Polymorphum gilvum
SL003B-26A1]
Length = 443
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 247/436 (56%), Gaps = 21/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NS 124
AA ++++F F K L + LG L + RLG YIPL G+N EAF Q +
Sbjct: 4 AAEQLAANLNFSAFAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPEAFAQAFGQAQSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EG+ GRK + Q
Sbjct: 64 IIGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTSVVPSLEQL-KKEGDQGRKTINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWV--LTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A +QA G + L N + W +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLATMQAYGIAVGLEGATNVVADPGWFFRISAVITLVGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL----VLG-IVYV 296
+GNG SL+IF I++ LPA+ + + G LAT II +++ V+G IV++
Sbjct: 183 GIGNGISLIIFAGIVAGLPAA----IVSTLELGRQGALATWIILMVIVLAVAVIGLIVFM 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---T 353
+ A+R++ I Y R +++LP K+N++GV+P IF++S L +P T++ F T
Sbjct: 239 ERAQRRLLIQYPKRQVGNKMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATISGFSSGT 298
Query: 354 GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
G L L G Y+ +I FF ++YT + +P D ++ LKR G IP +RP
Sbjct: 299 GPEWLTTVTALLGHGQPLYMLFYAAMIVFFCFFYTAIVFNPSDTADNLKRHGGFIPGIRP 358
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TA ++ VL+RI+ +G++++ ++ P + T + + F GTS+LI+V DT
Sbjct: 359 GERTAQYIDYVLTRITAVGAIYIVLVCLLPEFLISATGVPFY--FGGTSLLIVVSVTMDT 416
Query: 474 ARKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 417 VSQIQGHLLAHQYEGL 432
>gi|334128926|ref|ZP_08502802.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
gi|333385953|gb|EGK57178.1| preprotein translocase subunit SecY [Centipeda periodontii DSM
2778]
Length = 419
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 238/413 (57%), Gaps = 7/413 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFRIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPMNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS-R 314
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R R
Sbjct: 185 ALPKNIG-TIYAYVKAGTISYFSVFMFGVIALAMIVFVIHIETGFRRVPITYAKRLVGGR 243
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLP 374
G S+++PFKVN +GV+PIIF++S L P T+A+F + +K AA L G
Sbjct: 244 VGTSGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVPWIKTAATYLEWGKPLQTT 303
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+
Sbjct: 304 LYVLMIIFFTYFYTSVTVKIPDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAF 363
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
FLA +A P +I T++ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 FLAFIAVLPNLIASATNIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 415
>gi|399525055|ref|ZP_10765534.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
gi|398373587|gb|EJN51503.1| preprotein translocase, SecY subunit [Atopobium sp. ICM58]
Length = 430
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 241/427 (56%), Gaps = 22/427 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF---VGNLDQNSLLSTLDSFS 133
F F+ P L K L L +A+ RLG +IP GV+ +A + Q SLL ++ FS
Sbjct: 5 FAQAFRTPDLRRKLLFTLFIMAVFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLVNLFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L I +LGI+P+I A I+ QLL + P+ DL K EG+ G+ K+ QYTRY ++
Sbjct: 65 GGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHK-EGQTGQAKLTQYTRYLTIFL 123
Query: 194 AIVQAIGQVLYLRP----------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA + R + D S + + ++ G+ ++GE I++ +
Sbjct: 124 GILQATTTISLARSGQLFQACSEDVIRDRSVMTFIMMIIVMMAGTGVIMWLGELITERGI 183
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG SLLIFTSI + LP + Q G + +A I+ +L+ + +VYV++A+R+I
Sbjct: 184 GNGMSLLIFTSIAARLP----EQLLSIGQAGKWGSVAAIVALLLLVAIAVVYVEQAQRRI 239
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA 361
P+ YA R R + Y+P K+N SGV+P+IF++S LALP +A+F T ++
Sbjct: 240 PVQYAKRMIGRRQYGGTTTYIPLKINMSGVIPVIFASSILALPPMIAQFGKTEDGWVQWI 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ G SFYL L+ FF ++YT + +PD+V++ +K+ G IP R G+ TA +L
Sbjct: 300 SAHFTQGSSFYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGFIPGYRAGRPTAEYL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAE 480
+ V++RI+ G+++L I+A P++ L++ + F GT++LI++G T +++ +
Sbjct: 360 RYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQMPFGGTTLLIIIGVGLQTVKEINTQ 419
Query: 481 IISQKYK 487
+ Y+
Sbjct: 420 LQQHHYE 426
>gi|389721948|ref|ZP_10188649.1| preprotein translocase subunit SecY [Rhodanobacter sp. 115]
gi|388444961|gb|EIM01050.1| preprotein translocase subunit SecY [Rhodanobacter sp. 115]
Length = 442
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 239/410 (58%), Gaps = 16/410 (3%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-LLSTLDSFSGGGIGRLGICSLGIVPFI 151
++G L + RLG +IP+ GVN +A + Q+ LL + FSGG +GR + +LG++P+I
Sbjct: 27 VIGALVVYRLGSFIPVPGVNPDAMTNLIGQSGGLLDMFNMFSGGSLGRFSVFALGVIPYI 86
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----- 206
+A IV Q++ + P LQ L K+EG+AG++ + YTR+ +VG + QA G + L
Sbjct: 87 SASIVVQMMGSVLPSLQAL-KKEGQAGQRTLTMYTRFGTVGLSAFQAFGISMALMKQSSG 145
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V +VL++V LT GS F ++GE++++ +GNG SLLIF I++ LP +
Sbjct: 146 GMPVVYMPGYGFVLSAVVGLTAGSMFLMWLGEQMTERGIGNGISLLIFAGIVAGLPGAVT 205
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGI-VYVQEAERKIPINYASRYTSRSGGLQRSAY 323
T+ A + +++ +L V V+++ A+R+I +NYA R + + ++++
Sbjct: 206 HTLGMANNGELSVLKLLMVVGLVLAVTAFCVFMERAQRRITVNYARRSGGQKAYMNQTSH 265
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILL 379
LP K+N SGV+P IF++S L P T A + + L+ L+PG Y LL
Sbjct: 266 LPLKINMSGVIPPIFASSLLMFPATAATWFSAGSQSHWLQNLTQMLSPGEPTYDIVYSLL 325
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F ++YT + + + ++ LKR GA IP +RPG+STA ++ V++R++ +G+V+L ++
Sbjct: 326 VIIFAFFYTAIVFNSQETADNLKRSGALIPGIRPGRSTAEYIDAVMTRLTGVGAVYLVLV 385
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ H+ + F GTS+LI+V D ++QA ++S +Y+ +
Sbjct: 386 CLVPTFMQSYWHVPFY--FGGTSLLIVVVVVMDFTAQIQAHLVSHQYEGL 433
>gi|323141376|ref|ZP_08076267.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414125|gb|EFY04953.1| preprotein translocase, SecY subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 418
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 219/401 (54%), Gaps = 5/401 (1%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L + R G +IP+ GVN +L LD FSGG + + I ++ I
Sbjct: 17 KVLFTLAMFIVFRAGTHIPVPGVNASVIEQLFRSGNLFGLLDMFSGGALSKFSIFAMSIT 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL + P L+ K EGE G KK + TR +V A VQA G L+
Sbjct: 77 PYINASIILQLLKVVVPTLEQWSK-EGEEGFKKTTKLTRMLTVALAFVQACGMAYGLKMA 135
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+N+ +L LT G+ F +IGE+I+ +GNG SL+IF I+S LP + +
Sbjct: 136 INNPGIFSILLIAITLTAGTVFLMWIGEQITARGVGNGISLIIFAGIVSRLPDGL-KVIF 194
Query: 269 EAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
+ Q G L I+ + I L V+ ++ + E RKIP+ YA R + ++Y+P
Sbjct: 195 QYLQAGTVSLLNVILFAAIALAMVVFVIIISEGIRKIPVQYAKRVVGKKAYGGHTSYIPL 254
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYY 386
KVN +GV+PIIF++S L P T+A+F + +K G +L+I FF Y+
Sbjct: 255 KVNQAGVIPIIFASSVLMFPVTIAQFVDVPWVKAMGKLFQWGSPLQTTLYVLMILFFTYF 314
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
YT + L+ D+S+ +K+ G IP +RPG T +L V+SRI++ G++FL+++A P VI
Sbjct: 315 YTAVSLNIGDLSDNIKKNGGFIPGLRPGNPTTEYLDKVMSRITLAGAIFLSLIALMPHVI 374
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T + F GT++LI+VG A T +++++ ++ + Y
Sbjct: 375 GWVTRIEGVY-FGGTALLIVVGVALQTMKQIESMVLMRHYH 414
>gi|300022561|ref|YP_003755172.1| preprotein translocase subunit SecY [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524382|gb|ADJ22851.1| preprotein translocase, SecY subunit [Hyphomicrobium denitrificans
ATCC 51888]
Length = 447
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 250/440 (56%), Gaps = 25/440 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG +IP+ G+N AF +
Sbjct: 4 AAEQLASNLNFSAFAKAEDLKRRLWFTLGALIVYRLGTFIPMPGINPAAFAETFKSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + RL I +L I+P+I+A I+ QL+ I+PKL+ L K+EGEAGRK++ Q
Sbjct: 64 ILGMFNMFSGGALERLAIFALNIMPYISASIIMQLMTSISPKLEAL-KKEGEAGRKQINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVN-------DFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A +QA G + L N D + T+V L G+ F ++GE+
Sbjct: 123 YTRYLTVVLAALQAYGIAVGLEGSQNSAGAVVLDPGLFFRATTVITLVGGTVFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLG---- 292
++ +GNGTSL+IF I++ LP + V + F+ ++ I++ FI+L L
Sbjct: 183 VTQRGVGNGTSLIIFAGIVAGLPGA----VVQLFELSRTGSISPAILLFFIVLALAVVAA 238
Query: 293 IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF 352
IV+ ++A+R++ + Y R +++LP K+N SGV+P IF++S L LP T+A+F
Sbjct: 239 IVFCEQAQRRLLVQYPKRQVGNKMFQGEASHLPLKLNPSGVIPPIFASSLLLLPITVAQF 298
Query: 353 T---GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
T G L A L G +L +I FF ++YT + ++P + ++ L++ G +P
Sbjct: 299 TAGQGPEWLNTAVAMLGSGQPLHLFIYAAMIIFFTFFYTAVVINPKETADNLRKYGGFLP 358
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPG+ TA ++ V++RI+V+G+++LA + P ++ + + F GTS+LI V
Sbjct: 359 GIRPGEKTAEYIDYVMTRITVVGALYLAAVCVLPEILTSYAGIPLY--FGGTSLLIAVSV 416
Query: 470 ATDTARKVQAEIISQKYKNI 489
DT +VQ +I+Q+Y+ +
Sbjct: 417 TMDTVSQVQGHLIAQQYEGL 436
>gi|384136711|ref|YP_005519425.1| preprotein translocase subunit SecY [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290796|gb|AEJ44906.1| preprotein translocase, SecY subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 430
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 247/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L L LA+ R+G YIP+ G+N A N+L S L+ FSGG R I ++
Sbjct: 14 LRKRILFTLMVLAVYRIGTYIPVPGMNVSALNAGAGNNALFSLLNMFSGGAFYRFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
+ P+I A I+ QLL + P+ ++ QK EGE+GR+K+ Q TRY +V ++QA G +
Sbjct: 74 SVTPYITASIIVQLLQSGVIPRFEEWQK-EGESGRQKLTQVTRYLTVALGLMQAAGFTYM 132
Query: 204 YLR-----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ R P N++ + +V+ VTL T G + GE I++ +GNG SLLIFTSI+S
Sbjct: 133 FARSGLLLPGANNWWS-YVVIVVTL-TAGDTLLMWFGEMITEKGVGNGISLLIFTSILSR 190
Query: 259 LPASFGRTVAEAF--QDGN-YIGL--ATIIISFILLVLG-IVYVQEAERKIPINYASRYT 312
A F Q G+ ++G+ I+I+ I+++ IV+VQ+AERKIP+ YA R
Sbjct: 191 FSTLGQEVYANWFMNQSGHLFLGILKTLILIAGIVVIFALIVFVQQAERKIPVQYAKRVV 250
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSF 371
R+ + +Y+P K+ ++GV+P+IF+ S L LP T+A + + + L+P +
Sbjct: 251 GRTVYSGQQSYIPIKLLAAGVIPVIFAISLLFLPYTIASYFQSHHWAEFILRYLSPQTGW 310
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
++ ++LI F ++YT +Q++P ++EQL++ IP VRPG T ++ V++R++V
Sbjct: 311 FMGAEVILIILFTFFYTHVQINPQQLAEQLQKHAGFIPGVRPGHETEMYIVKVINRVTVF 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GSVFL +++ P ++ +LT + GTS++ILVG A T ++++ +++ ++Y+
Sbjct: 371 GSVFLGVISVLPFILLGAMNLTDYN-IQGTSLIILVGVALQTMQQMEGQLLQRQYR 425
>gi|118591161|ref|ZP_01548560.1| protein translocase subunit SecY [Stappia aggregata IAM 12614]
gi|118436237|gb|EAV42879.1| protein translocase subunit SecY [Stappia aggregata IAM 12614]
Length = 443
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 249/434 (57%), Gaps = 17/434 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNS 124
AA S+++F F K L + LG L + RLG YIPL G+N +AF N Q+
Sbjct: 4 AAEQLASNLNFSAFAKAEELKKRIWFTLGALLVYRLGTYIPLPGINPDAFAQAFNQAQSG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 IIGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPSLEQL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWVLTSVTLLTL--GSAFTTYIGERISDL 241
YTRY +V A QA G + L N + W + T+LTL G+ F ++GE+I+
Sbjct: 123 YTRYGTVILAAFQAYGIAVGLEGAANVVADPGWFFRASTVLTLVGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY---IGLATIIISFILLVLGIVYVQE 298
+GNG SL+IF I++ LP + V E + G+ + L +I++ +++ L IV+++
Sbjct: 183 GIGNGISLIIFAGIVAGLPVAL-VNVLELGRQGSMSTVLILGILILAVVVIAL-IVFMER 240
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GI 355
A+R++ I Y R +++LP K+N++GV+P IF++S L +P T+ F+ G
Sbjct: 241 AQRRLLIQYPKRQMGNRMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATIGGFSQGSGN 300
Query: 356 AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGK 415
L AL G ++ +I FF ++YT + +P D ++ LK+ G IP +RPG+
Sbjct: 301 EWLTYITAALGHGQPLFMVFYAAMIVFFCFFYTAIVFNPSDTADNLKKHGGFIPGIRPGE 360
Query: 416 STAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTAR 475
TA ++ VL+RI+V+G++++ ++ P + T + + F GTS+LI+V DT
Sbjct: 361 RTAQYIDYVLTRITVVGAIYITVVCLLPEFLISATGVPFY--FGGTSLLIVVSVTMDTVS 418
Query: 476 KVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 419 QIQGHLLAHQYEGL 432
>gi|91228968|ref|ZP_01262863.1| preprotein translocase SecY [Vibrio alginolyticus 12G01]
gi|262392496|ref|YP_003284350.1| preprotein translocase SecY subunit [Vibrio sp. Ex25]
gi|269964716|ref|ZP_06178954.1| preprotein translocase subunit secY [Vibrio alginolyticus 40B]
gi|451971165|ref|ZP_21924387.1| preprotein translocase SecY [Vibrio alginolyticus E0666]
gi|91187488|gb|EAS73825.1| preprotein translocase SecY [Vibrio alginolyticus 12G01]
gi|262336090|gb|ACY49885.1| preprotein translocase SecY subunit [Vibrio sp. Ex25]
gi|269830615|gb|EEZ84836.1| preprotein translocase subunit secY [Vibrio alginolyticus 40B]
gi|451932981|gb|EMD80653.1| preprotein translocase SecY [Vibrio alginolyticus E0666]
Length = 444
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y ++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSV 433
>gi|49474384|ref|YP_032426.1| preprotein translocase subunit SecY [Bartonella quintana str.
Toulouse]
gi|49239888|emb|CAF26286.1| Preprotein translocase secY subunit [Bartonella quintana str.
Toulouse]
Length = 448
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 248/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S++ FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNMSFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLEAL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V A++QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAVLQAFGIAVALETGIGIGLKIVVEPGFMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYV 296
I+ +GNG SL+IFT I++ LP++F + + Q L TII+ + V+ IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLTIIVLIAISVIAVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQIFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ +L+AFF ++YT + +P+D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAVSYSLGHGQPLYMIIYAILMAFFCFFYTAIVFNPNDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P I + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVIGAIYIILVCLLPEFIISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|254487369|ref|ZP_05100574.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
gi|214044238|gb|EEB84876.1| preprotein translocase, SecY subunit [Roseobacter sp. GAI101]
Length = 473
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 244/419 (58%), Gaps = 24/419 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++ + + F+GG +GR+GI
Sbjct: 42 LRNRILFTLGLLIVYRLGTFIPVPGIDGTALRQFMESAGQGIGGMVSMFTGGALGRMGIF 101
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + P L+ L K+EGE GRKK+ QYTR+ +V A +QA G +
Sbjct: 102 ALGIMPYISASIIVQLMTSMVPALEQL-KKEGEQGRKKINQYTRFGTVALATLQAYGLAV 160
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D + D + + + L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 161 SLE--AGDIAADPGMYFRMACMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 218
Query: 260 PASFGRTVAEAFQDGNYIGLAT-----IIISFILLVLGIVYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ +++ I+ ++ +V+++ A RKI I Y R +
Sbjct: 219 PAA----IAQFFSSGRSGAISPAVIVGVLVMVIVTIMFVVFMERALRKIHIQYPRRQVGQ 274
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL---NPGGSF 371
S++LP KVN +GV+P IF++S L LP T++ F+G + +V L PG
Sbjct: 275 KMYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTGPVMSVLLANFGPGQPL 334
Query: 372 YLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + +I FF Y+YTF + PD+V++ LK Q +P +RPGK TA +L+ V++R+ V
Sbjct: 335 YLLFFVAMIVFFAYFYTFNVSFKPDEVADNLKNQNGFVPGIRPGKKTAEYLEYVVNRVLV 394
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
LG+ +LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 395 LGAAYLAAVCILPEILRGQFAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 451
>gi|418327360|ref|ZP_12938521.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
gi|365233091|gb|EHM74058.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
14.1.R1.SE]
Length = 430
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 243/409 (59%), Gaps = 20/409 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-- 208
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 209 ----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
+ ++L +V +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S
Sbjct: 139 GQLIIEQSVMSYLLIAV-VLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLE 197
Query: 265 RTVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
+ F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 198 QFAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ 257
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNIL 378
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++
Sbjct: 258 -ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADIANPSSNIGMIIYVV 316
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA
Sbjct: 317 LIIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITRVLYRLTFVGSIFLAA 376
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 377 IAILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|115376081|ref|ZP_01463326.1| preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
gi|115366896|gb|EAU65886.1| preprotein translocase, SecY subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 400
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 226/383 (59%), Gaps = 28/383 (7%)
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
L+S + FSGG + ++ I LGI+P+++A I+ QLLA + P L+ LQK EG +GR+K+ Q
Sbjct: 10 LVSLFNLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQK-EGASGRQKINQ 68
Query: 185 YTRYASVGFAIVQAIGQVLYL--------------RPYVNDFSTDWVLTSVTLLTLGSAF 230
YTRY S+ ++VQ IG +L + V D S + +V LT G+AF
Sbjct: 69 YTRYGSIVLSVVQGIGISRWLASLGRSDAGQSGFNQIVVPDDSAWFTFMTVISLTAGTAF 128
Query: 231 TTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE-----AFQDGNYIGLATIIIS 285
++GERI++ +GNG SL+IF I++ L + G+T+ + A + +GLA ++
Sbjct: 129 IMWLGERITERGIGNGISLIIFAGIVAGLLPN-GKTLLDMTAQGAIEAAALVGLAVFML- 186
Query: 286 FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLAL 345
FI+ V +VYV+ R+IP+ YA R R ++ Y P KVN+SGV+P IF+ + L+
Sbjct: 187 FIIAV--VVYVERGMRRIPVQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGALLSF 244
Query: 346 PGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQG 405
P TL + + + NP Y +LL+ FF Y+YT L PDDV++ +K+QG
Sbjct: 245 PATLGTWFPFLQTFRQGLEGNP--WLYNGLFVLLVIFFAYFYTALTFRPDDVADNIKKQG 302
Query: 406 ASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLI 465
IP +RPG+ TA F++ VL+RI+ G+++LA + P ++ Q + F GT++LI
Sbjct: 303 GYIPGIRPGRQTADFIERVLNRITFGGAIYLATICVIPTILTQWLQVPF--AFGGTALLI 360
Query: 466 LVGCATDTARKVQAEIISQKYKN 488
+VG A DT ++++ +IS+ Y+
Sbjct: 361 VVGVALDTVQQIEGHLISRNYEG 383
>gi|395782700|ref|ZP_10463072.1| preprotein translocase, SecY subunit [Bartonella rattimassiliensis
15908]
gi|395416578|gb|EJF82948.1| preprotein translocase, SecY subunit [Bartonella rattimassiliensis
15908]
Length = 448
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + LG L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLGALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVIPSLETL-KKEGEVGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + +++V L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALESGIGTGLQIVLEPGLMFRISAVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ +L++ IV++
Sbjct: 183 ITSRGIGNGVSLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLMGIVLIAVLVIGLIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + AL G Y+ L+AFF ++YT + +P+D ++QLK+ IP +RPG
Sbjct: 303 PQWIQMISYALGHGQPLYMIIYAFLMAFFCFFYTAIVFNPNDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ + P + + + G GTS+LI+V DT
Sbjct: 363 ERTAQYIDYVLTRITVVGAIYIISVCLLPEFMISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|254419750|ref|ZP_05033474.1| preprotein translocase, SecY subunit [Brevundimonas sp. BAL3]
gi|196185927|gb|EDX80903.1| preprotein translocase, SecY subunit [Brevundimonas sp. BAL3]
Length = 459
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 254/440 (57%), Gaps = 22/440 (5%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD----Q 122
AA ++++ G F K L + L LG L + R+G Y+P+ G+N +AF+ Q
Sbjct: 4 AAEQLAANMNMGSFAKATELHKRLLFTLGALLVYRIGTYVPIPGINSQAFLQFFQDPSGQ 63
Query: 123 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
+L + FSGG + R+ I +L + P+I+A I+ QL+ + P + L+K GE+GRK++
Sbjct: 64 RGILDMFNMFSGGAVERMAIFALNVAPYISASIIVQLMGTVYPPWEKLKKEGGESGRKQL 123
Query: 183 LQYTRYASVGFAIVQAIGQV--LYLRP-YVNDFSTDWVLTSVTLLTLGSAFTTYIGERIS 239
QYTRY +V A+ Q++G L +P V++ +++++V LT G+ F ++GE+++
Sbjct: 124 NQYTRYLTVFLALAQSLGIAAGLNAQPGLVDNPGIFFLVSTVVTLTGGTMFLMWLGEQVT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQ 297
+GNG SL+IF I++ LP++ R + A Q G A + I+ + + V+ IV+++
Sbjct: 184 ARGVGNGISLIIFAGIVAVLPSTIARMLGLA-QQGQMSAFALLFIAVLAVATVVFIVFME 242
Query: 298 EAERKIPINYASRYT-SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
A+R++ I Y R +R G +RS +LP KVN++GV+P IF++S L LP T+A T A
Sbjct: 243 RAQRRLLIQYPKRQEGNRMAGGERS-FLPLKVNTAGVIPPIFASSLLMLPTTVASLTANA 301
Query: 357 ALKK-------AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
L L G ++ LI FF ++YT + +P+D +E L++ G +P
Sbjct: 302 DLPDYLGWLPLVTSQLTHGQPLFMALYAALIIFFCFFYTSITFNPEDTAENLRKYGGFLP 361
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPGK TA +L VL+R++V+G+ ++ + P + + + F GTS+LI+V
Sbjct: 362 GIRPGKRTAEYLDYVLTRLTVIGAAYITAVCLLPEFLVAQMGNSLY--FGGTSILIVVSV 419
Query: 470 ATDTARKVQAEIISQKYKNI 489
DT ++Q+++++ +Y+ +
Sbjct: 420 TMDTVAQIQSQLLAHQYEGL 439
>gi|258512650|ref|YP_003186084.1| preprotein translocase subunit SecY [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479376|gb|ACV59695.1| preprotein translocase, SecY subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 430
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 247/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L L LA+ R+G YIP+ G+N A N+L S L+ FSGG R I ++
Sbjct: 14 LRKRILFTLMVLAVYRIGTYIPVPGMNVSALNAGAGNNALFSLLNMFSGGAFYRFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
+ P+I A I+ QLL + P+ ++ QK EGE+GR+K+ Q TRY +V ++QA G +
Sbjct: 74 SVTPYITASIIVQLLQSGVIPRFEEWQK-EGESGRQKLTQVTRYLTVALGLLQAAGFTYM 132
Query: 204 YLR-----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ R P N++ + +V+ VTL T G + GE I++ +GNG SLLIFTSI+S
Sbjct: 133 FARSGLLLPGANNWWS-YVVIVVTL-TAGDTLLMWFGEMITEKGVGNGISLLIFTSILSR 190
Query: 259 LPASFGRTVAEAF--QDGN-YIGL--ATIIISFILLVLG-IVYVQEAERKIPINYASRYT 312
A F Q G+ ++G+ I+I+ I+++ IV+VQ+AERKIP+ YA R
Sbjct: 191 FSTLGQEVYANWFMNQSGHLFLGILKTLILIAGIVVIFALIVFVQQAERKIPVQYAKRVV 250
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSF 371
R+ + +Y+P K+ ++GV+P+IF+ S L LP T+A + + + L+P +
Sbjct: 251 GRTVYSGQQSYIPIKLLAAGVIPVIFAISLLFLPYTIASYFQSHHWAEFILRYLSPQTGW 310
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
++ ++LI F ++YT +Q++P ++EQL++ IP VRPG T ++ V++R++V
Sbjct: 311 FMGAEVILIILFTFFYTHVQINPQQLAEQLQKHAGFIPGVRPGHETEMYIVKVINRVTVF 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GSVFL +++ P ++ +LT + GTS++ILVG A T ++++ +++ ++Y+
Sbjct: 371 GSVFLGVISVLPFILLGAMNLTDYN-IQGTSLIILVGVALQTMQQMEGQLLQRQYR 425
>gi|417321174|ref|ZP_12107714.1| preprotein translocase subunit SecY [Vibrio parahaemolyticus 10329]
gi|328471854|gb|EGF42731.1| preprotein translocase subunit SecY [Vibrio parahaemolyticus 10329]
Length = 444
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 246/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V++ T + L + L + F ++GE+I++ +GNG SLLIF I++ L
Sbjct: 138 GLPNMVDNLVVINQTMFTLIATVSLVTSTMFLMWLGEQITERGIGNGISLLIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S++LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSSHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSAFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 433
>gi|229074191|ref|ZP_04207237.1| Preprotein translocase subunit secY [Bacillus cereus Rock4-18]
gi|229094852|ref|ZP_04225857.1| Preprotein translocase subunit secY [Bacillus cereus Rock3-29]
gi|229100929|ref|ZP_04231733.1| Preprotein translocase subunit secY [Bacillus cereus Rock3-28]
gi|229113806|ref|ZP_04243241.1| Preprotein translocase subunit secY [Bacillus cereus Rock1-3]
gi|407708078|ref|YP_006831663.1| hypothetical protein MC28_4842 [Bacillus thuringiensis MC28]
gi|228669677|gb|EEL25084.1| Preprotein translocase subunit secY [Bacillus cereus Rock1-3]
gi|228682508|gb|EEL36581.1| Preprotein translocase subunit secY [Bacillus cereus Rock3-28]
gi|228688595|gb|EEL42468.1| Preprotein translocase subunit secY [Bacillus cereus Rock3-29]
gi|228708961|gb|EEL61088.1| Preprotein translocase subunit secY [Bacillus cereus Rock4-18]
gi|407385763|gb|AFU16264.1| Preprotein translocase subunit secY [Bacillus thuringiensis MC28]
Length = 425
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 240/414 (57%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 9 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 67
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 68 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 126
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 127 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 186
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + + ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 187 ISQVYQQQFQNIGDQLFMSIVKVVLILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGANG 246
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 247 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 306
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 307 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 366
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 367 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 420
>gi|409390262|ref|ZP_11242021.1| preprotein translocase SecY subunit [Gordonia rubripertincta NBRC
101908]
gi|403199811|dbj|GAB85255.1| preprotein translocase SecY subunit [Gordonia rubripertincta NBRC
101908]
Length = 442
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 246/428 (57%), Gaps = 33/428 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDSFSGGGIGRLGI 142
K L +LG + L RLG +P GV+ +A LD+ +S+ S ++ FSGG + +L +
Sbjct: 17 KILFVLGIIILYRLGATVPSPGVDYQAVRACLDEVSAGESSSVYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + P+ + L+K EG+AG+ K+ QYTRY +V A++Q+ G V
Sbjct: 77 FAIGIMPYITASIIVQLLTVVIPRFEQLRK-EGQAGQAKMTQYTRYLAVALALLQSTGIV 135
Query: 203 LY-----LRP--------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
L P +ND S ++ V ++T G+ + GE I++ +GNG SL
Sbjct: 136 ALADRGQLLPQSCATSGEVINDSSIFGLMIIVLVMTAGACVVMWFGELITERGIGNGMSL 195
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
LIF I + +PA GRT+ G + A + ++ +++V G+V++++ +R+IP+ YA
Sbjct: 196 LIFAGIAARIPAE-GRTILNT--RGGLV-FALVCLAALIIVAGVVFIEQGQRRIPVQYAK 251
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVA- 364
R R S YLP KVN +GV+P+IF++S L LP + T G + + V
Sbjct: 252 RMVGRKMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPQLIVELTRSTDGTQSTWQEYVTR 311
Query: 365 --LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+P Y+ L+I FF Y+Y + +P++ ++++K+ G IP +RPG TA +L
Sbjct: 312 YLTDPSNGVYIAVYFLMIIFFTYFYVAVTFNPEERADEMKKYGGFIPGIRPGAPTAEYLG 371
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAE 480
VLSRI++ GS++L I+A P + + + + F GT+VLI+VG DT +++ ++
Sbjct: 372 YVLSRITLPGSIYLGIIAVLPNLFLEIGNSGGVQNLPFGGTAVLIMVGVGLDTMKQINSQ 431
Query: 481 IISQKYKN 488
++ +KY+
Sbjct: 432 LMQRKYEG 439
>gi|332982689|ref|YP_004464130.1| protein translocase subunit secY/sec61 alpha [Mahella australiensis
50-1 BON]
gi|332700367|gb|AEE97308.1| protein translocase subunit secY/sec61 alpha [Mahella australiensis
50-1 BON]
Length = 418
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 243/405 (60%), Gaps = 13/405 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ L LG L + R+G +IP+ G+N E ++Q LL+ D SGG G I ++ I
Sbjct: 17 RILYTLGMLLVFRIGSFIPIPGINNEYLNQMIEQGGLLAFFDIISGGSFGNFTIFAMSIT 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP- 207
P+IN+ I+ QLL P L+ L K EGE GRKK+ QYTRY +V A VQA+G L+
Sbjct: 77 PYINSSIIMQLLTVAIPSLEKLAK-EGEEGRKKIAQYTRYLTVVLAFVQALGITYGLKNI 135
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
VN + + ++TL T G+AF ++GE+I++ +GNG SL+IF I++ LP + T+
Sbjct: 136 VVNKGFFSYFVVALTL-TAGTAFLMWLGEQITEKGIGNGISLIIFAGIVARLPMTV-ITM 193
Query: 268 AEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
E+ + G + + +++ + LV +V+V E ER+IP+ YA R R +S +LP
Sbjct: 194 TESIRAGAISIWSVPLLVVGAVALVAAVVFVNEGERRIPVQYAKRVVGRRMYGGQSTHLP 253
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARF---TGIAALKKAAVALNPGGSFYLPTNILLIAF 382
KVN+ GV+PIIF+ S L LP T+++F +GI + A P + YL +LI
Sbjct: 254 MKVNAGGVIPIIFAISILMLPQTISQFWPSSGIGQWFERYFA--PNSALYLILYAVLIIL 311
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F Y+Y + +P ++S+ L++ G IP +RPG+ TA +L + SRI++ G++FLA +A
Sbjct: 312 FTYFYAQITFNPIEISDNLRQYGGFIPGIRPGRPTAEYLARISSRITLAGALFLAAVAVL 371
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
PAV + + + F G++VLI++G A +T ++++A+++ + YK
Sbjct: 372 PAVFTSGSGIPLY--FGGSAVLIVIGVALETMKQLEAQMLMRHYK 414
>gi|423381823|ref|ZP_17359106.1| preprotein translocase subunit secY [Bacillus cereus BAG1O-2]
gi|423439692|ref|ZP_17416598.1| preprotein translocase subunit secY [Bacillus cereus BAG4X2-1]
gi|423450151|ref|ZP_17427029.1| preprotein translocase subunit secY [Bacillus cereus BAG5O-1]
gi|423467949|ref|ZP_17444717.1| preprotein translocase subunit secY [Bacillus cereus BAG6O-1]
gi|423537349|ref|ZP_17513767.1| preprotein translocase subunit secY [Bacillus cereus HuB2-9]
gi|423543077|ref|ZP_17519465.1| preprotein translocase subunit secY [Bacillus cereus HuB4-10]
gi|423543617|ref|ZP_17519975.1| preprotein translocase subunit secY [Bacillus cereus HuB5-5]
gi|423620262|ref|ZP_17596093.1| preprotein translocase subunit secY [Bacillus cereus VD115]
gi|423626928|ref|ZP_17602703.1| preprotein translocase subunit secY [Bacillus cereus VD148]
gi|401126774|gb|EJQ34508.1| preprotein translocase subunit secY [Bacillus cereus BAG5O-1]
gi|401166777|gb|EJQ74077.1| preprotein translocase subunit secY [Bacillus cereus HuB4-10]
gi|401187782|gb|EJQ94854.1| preprotein translocase subunit secY [Bacillus cereus HuB5-5]
gi|401248822|gb|EJR55143.1| preprotein translocase subunit secY [Bacillus cereus VD115]
gi|401250123|gb|EJR56427.1| preprotein translocase subunit secY [Bacillus cereus VD148]
gi|401628449|gb|EJS46290.1| preprotein translocase subunit secY [Bacillus cereus BAG1O-2]
gi|402411816|gb|EJV44179.1| preprotein translocase subunit secY [Bacillus cereus BAG6O-1]
gi|402421873|gb|EJV54117.1| preprotein translocase subunit secY [Bacillus cereus BAG4X2-1]
gi|402459055|gb|EJV90793.1| preprotein translocase subunit secY [Bacillus cereus HuB2-9]
Length = 433
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 240/414 (57%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ N + DQ + L L++F GG + I ++GI+
Sbjct: 17 KILFTLAMLIVFRIGTFIPVPFTNGDVLKAQ-DQLNALGILNTFGGGALKNFSIFAMGIM 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +Q G +
Sbjct: 76 PYITASIIVQLLQMDVVPKFSEWSK-QGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNG 134
Query: 208 YVND---FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
V + W L T+LT G+AF ++GE+I+ +GNG S+LIF I + +P+
Sbjct: 135 MVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGISILIFGGIAAAIPSV 194
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSRSG 316
+ + FQ+ G+ + ++ + + ILL ++G++++Q+A RKIPI YA R T +G
Sbjct: 195 ISQVYQQQFQNIGDQLFMSIVKVVLILLAVLAVIVGVIFIQQAVRKIPIQYAKRVTGANG 254
Query: 317 GLQ--RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSFYL 373
++ +LP KVNS+GV+P+IF+ S L P T+A+F + + +A N +
Sbjct: 255 NHAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGM 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+ LI F Y+Y F+Q++P+ +SE L +QG +P +RPGK+T +L +L R++ +GS
Sbjct: 315 IIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGS 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+FLA +A P + + +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 375 IFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK 428
>gi|182678357|ref|YP_001832503.1| preprotein translocase subunit SecY [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634240|gb|ACB95014.1| preprotein translocase, SecY subunit [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 444
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 245/433 (56%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--S 124
AA S++++G F K L + LG L + RLG YIPL G++ AF N N
Sbjct: 4 AAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGNRQG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +L I+P+I+A I+ QLL + P L+ L K+EGEAGRK + Q
Sbjct: 64 VLELFNMFAGGAVQRMAIFALNIMPYISASIIIQLLTSVLPALETL-KKEGEAGRKVMNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A QA G + L V + + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRISTVLTLMGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLGIVYVQEAE 300
+GNG+SL+IF I++ P++ T+ Q G+ +II I ++ IV+++ A+
Sbjct: 183 GIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIA 356
R++ I Y R ++++LP K+N+SGV+P IF++S L LP T+A F+ G
Sbjct: 243 RRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGGTG 302
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
L + L G Y+ + LI FF ++YT + +P + ++ LK+ G +P +RPG+
Sbjct: 303 ILATVSAYLAHGRPLYMAAYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ T+L RI+VLG+ +LA++ P ++ L + F GTS+LI+V DT +
Sbjct: 363 TAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPFY--FGGTSLLIVVSVTMDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+ + + +Y+ +
Sbjct: 421 IHGHLQAHQYEGL 433
>gi|393763747|ref|ZP_10352362.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
gi|392605363|gb|EIW88259.1| preprotein translocase subunit SecY [Alishewanella agri BL06]
Length = 442
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 246/417 (58%), Gaps = 16/417 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +L + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKSRLLFVLLAIIVFRLGSFVPIPGIDATVLAQLFEQQRGTIVEMFNMFSGGALERASVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P + +L K+EGEAG++K+ QYTRY ++ AI+Q+IG
Sbjct: 78 ALGIMPYISASIIVQLLTVMHPAMAEL-KKEGEAGKRKINQYTRYGTLALAILQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + T+V L G+ F ++GE+I++ +GNG SLLIFT I++
Sbjct: 137 GLPNMMPGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIVAGF 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q D +++ L I + I + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGQTIEQARQGDLHFLLLVAIGVIVIAITWFVVFFERGQRRIVVNYAKRQQGRQVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA------LKKAAVALNPGGSFY 372
+S++LP KVN +GV+P IF++S + PGT+A + G L++ ++ L+PG Y
Sbjct: 257 AQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGMLANFLQELSLTLSPGQPLY 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G
Sbjct: 317 MMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLAG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 377 ALYITFICLVPEFMMVAWNVQFY--FGGTSLLIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|149922192|ref|ZP_01910630.1| SecY protein [Plesiocystis pacifica SIR-1]
gi|149816932|gb|EDM76417.1| SecY protein [Plesiocystis pacifica SIR-1]
Length = 438
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 251/423 (59%), Gaps = 20/423 (4%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGG 136
+ FK P L + L L LA+ R GI++ + GV+R + Q + L + FSGG
Sbjct: 6 NIFKLPELRRRVLFTLAMLAVYRFGIFVAVPGVDRTVMDKLVSQQTGGFLGYFNMFSGGA 65
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ L + +LGI+P+I+A I+ QL+ + PKL+ LQK EGE GR+K+ QY+RY +VG A+V
Sbjct: 66 LSNLSVFALGIMPYISASIIMQLMTVVIPKLEQLQK-EGETGRRKINQYSRYGTVGLALV 124
Query: 197 QAIGQVLYL-------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
Q +L + V + + L ++ LT G+ F ++GE+I++ +GNG SL
Sbjct: 125 QGYFMASWLEGQNTPGQTLVLETGLPFKLMTMLSLTAGTCFLMWLGEQITERGIGNGISL 184
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIG---LATIIISFILLVLGIVYVQEAERKIPIN 306
+IF II+ +P + + +A D G LA +++ ++++ +V ++ +R+IP+
Sbjct: 185 IIFAGIIADMPTASYQLAQKAIDDPENFGPLPLAMLLVVVLVVIAFVVIMERGQRRIPVI 244
Query: 307 YASRYTSRS--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
YA R + GG Q YLP ++N++GV+P IF++S + P +A TG L++ A A
Sbjct: 245 YAKRVVGKRMFGGSQN--YLPLRINNAGVIPPIFASSIIMFPAQIAGMTGNPYLQRFAAA 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+ G YL + L FF Y+YT +Q +P D+++ LK+Q ASIP VRPGK TA ++ +
Sbjct: 303 FSYGNWLYLTVYVALCIFFCYFYTQIQFNPVDLADNLKKQNASIPGVRPGKRTAEHIEAI 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ GS +++ + P ++ ++ + G GTS+LI+VG A DTA+++++ ++++
Sbjct: 363 LGRLTFAGSWYISAVCVLPVFLQTEFNVPFYYG--GTSLLIVVGVALDTAQQIESHLVTR 420
Query: 485 KYK 487
Y+
Sbjct: 421 SYE 423
>gi|406965942|gb|EKD91526.1| hypothetical protein ACD_30C00002G0023 [uncultured bacterium]
Length = 431
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 237/409 (57%), Gaps = 31/409 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+ +IPLGG+N N LL LD FSGG + + +LG+ P+INA I+
Sbjct: 29 LVIFRVVAHIPLGGINAAGLRDLFANNELLGLLDIFSGGTLANFSVIALGLNPYINASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDFST 214
QLL + PKL+ L K EG+ GR+K+ QYTRY +V A++QAIG LR + +
Sbjct: 89 MQLLTVVFPKLEALSK-EGDFGRQKINQYTRYLTVPLAVIQAIGMYTLLRNQGLIEVTTA 147
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT--VAEAFQ 272
+L+ V +T G+ F ++GE +++ +GNG SLLIF I++ P S +T V + Q
Sbjct: 148 IQILSIVVGMTAGTIFLMWLGEILTEYGIGNGISLLIFAGIVARAPVSLFQTASVVDQQQ 207
Query: 273 DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRY----TSRSGGLQRSAYLPFKV 328
N + A + I+ ++ GI++V E R+I + YA RY TS SG YLP +V
Sbjct: 208 IINILVFAGLAIA---MIAGIIFVNEGRRQILVQYARRYSGGRTSASGA---QTYLPLRV 261
Query: 329 NSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL----PTNIL------ 378
N +GV+PIIF+ S + LP +F +AA A L G F++ PT+IL
Sbjct: 262 NQAGVIPIIFAVSLVLLPSFGGQF--LAASNSAQ--LQQIGRFFVEHFQPTSILYNVVYF 317
Query: 379 -LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA 437
L+ F Y+YT + +P +++++K+ G IP +RPG++TA FL +L RI++ G +FL
Sbjct: 318 LLVLGFTYFYTAVIFNPTKIADEIKKYGGFIPGIRPGEATAKFLNFILLRITLAGGIFLG 377
Query: 438 ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
I+A P++ Q T++T GTS+LI+V DTA++ ++++I + Y
Sbjct: 378 IIAVLPSIASQATNVTTLV-VGGTSLLIVVSVILDTAKQFESKLIERNY 425
>gi|218961413|ref|YP_001741188.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans]
gi|167730070|emb|CAO80982.1| preprotein translocase secY subunit, essential membrane protein
[Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 437
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 233/429 (54%), Gaps = 32/429 (7%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSF 132
G+ F+ P L K L +L L RLG +IPL GVN A + N+L LD F
Sbjct: 6 GNMFRIPDLKKKILFTALFLVLYRLGSFIPLPGVNATALKAFFEGAREGGNTLFGLLDLF 65
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
GG R + +LGI+P+I A IV QLL I P + L+K EG G+KK+ Q TRY +V
Sbjct: 66 VGGNFERASVFALGIMPYITASIVIQLLGSIIPYFEKLRK-EGADGQKKLNQITRYGTVA 124
Query: 193 FAIVQAIGQVLYL---------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
A A+ ++L RP +F LT + L G+ +IGE+I++ +
Sbjct: 125 LAAFNALTITMWLTNLSGGVVPRP---NFLFH--LTGIITLVTGTMIVMWIGEQITEHGI 179
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAERK 302
GNG SL+IF II+ P F R + + D +Y A ++ +L+ +++V EA RK
Sbjct: 180 GNGISLIIFAGIIARYPEGFVRMIQKISVDPSYTWKAIAAVVLMVLVTAAVIFVTEAVRK 239
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-----IAA 357
IP+ YA R R +S Y+P +VN++GV+PIIF+ S L P T+A G
Sbjct: 240 IPVQYAKRIVGRRVYGGQSTYIPLRVNTAGVIPIIFAQSVLMFPATIAALLGGDSPFWTT 299
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
LK L+PG Y + LI FF Y+YT + L+P +++E + + G IP +PGK T
Sbjct: 300 LKNW---LSPGAVLYTILYVGLIIFFAYFYTAIVLNPTEMAENMVKYGGHIPGKKPGKKT 356
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ +VL RI++ G++F A +A P ++ L + F GT +LI+VG A DT +++
Sbjct: 357 AEYINSVLVRITLPGAIFFAFIALLPEIMSNRLDLPFY--FGGTGLLIVVGVALDTLQQI 414
Query: 478 QAEIISQKY 486
++ ++ + Y
Sbjct: 415 ESHLVMRHY 423
>gi|342214831|ref|ZP_08707502.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
gi|341590362|gb|EGS33605.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
780 str. F0422]
Length = 420
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 227/397 (57%), Gaps = 19/397 (4%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLGI+IP+ GV +L LD F+GG + + I ++ I P+INA I+ QLL
Sbjct: 29 RLGIHIPVPGVEASVIESLFTSGNLFGLLDLFAGGALSKFSIFAMSITPYINASIIMQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWV 217
+ P + K +GE GRKK+ + TRY +V +QA G LR +++ +
Sbjct: 89 GAVVPTFEAWSK-DGEEGRKKIAKVTRYGTVILGFIQAFGMTYALRASNALIDNSFMSVI 147
Query: 218 LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY- 276
L S+ +LT G+ F ++GE+I+ +GNG SL+IF I++ P +T+ + Q G
Sbjct: 148 LISI-ILTAGTCFLMWVGEQITAHGIGNGISLIIFAGIVARFPDGV-QTIYQYLQVGTIN 205
Query: 277 ----IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSG 332
I A I ++ I+LV+ V + +R+IPI YA R R S +LP KVN +G
Sbjct: 206 VFQAILFAIIAVAMIVLVIA---VTQGQRRIPIQYAKRVVGRKMYGGHSTFLPLKVNQAG 262
Query: 333 VMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQL 392
V+PIIF++S L P TLA+F + ++ A G +LI FF Y+YT + +
Sbjct: 263 VIPIIFASSILMFPATLAQFVQVPWVQTVASYFQWGTPIQTILYAVLILFFTYFYTAISI 322
Query: 393 DPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHL 452
+ D+++ +K+ G IP +RPGK TA ++ V++RI+++G+ FLA +A P +I L
Sbjct: 323 NITDMADNMKKHGGFIPGIRPGKPTADYVDRVMTRITLVGAFFLAFVAILPNMIG---GL 379
Query: 453 TAFRG--FAGTSVLILVGCATDTARKVQAEIISQKYK 487
T +G F GT++LI+VG A DT ++V++ +++++YK
Sbjct: 380 TGIQGVYFGGTALLIVVGVALDTMQQVESLVLTRQYK 416
>gi|343492614|ref|ZP_08730975.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
gi|342827064|gb|EGU61464.1| preprotein translocase subunit SecY [Vibrio nigripulchritudo ATCC
27043]
Length = 446
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 249/421 (59%), Gaps = 21/421 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVN------DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L V D + V+ +++L+T G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 138 ALPSMVTGQLVVIDQTMFTVIATISLVT-GTMFLMWLGEQITERGIGNGISLIIFAGIVA 196
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ G+T+ +A Q + N + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 197 GLPSAIGQTIEQARQGELNVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKV 256
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--------IAALKKAAVALNPG 368
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG
Sbjct: 257 FAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGNTGGEDSAFSWLTDVSLALSPG 316
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+
Sbjct: 317 QPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRL 376
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y +
Sbjct: 377 TLAGALYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYDS 434
Query: 489 I 489
+
Sbjct: 435 V 435
>gi|302382638|ref|YP_003818461.1| preprotein translocase subunit SecY [Brevundimonas subvibrioides
ATCC 15264]
gi|302193266|gb|ADL00838.1| preprotein translocase, SecY subunit [Brevundimonas subvibrioides
ATCC 15264]
Length = 459
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 254/439 (57%), Gaps = 20/439 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFV---GNLD-Q 122
AA ++++ G F K L + L LG L + R+G Y+P+ G+N EAF+ N D Q
Sbjct: 4 AAEQLAANMNMGSFAKATELHKRLLFTLGALLVYRIGTYVPIPGINSEAFLQFFNNPDGQ 63
Query: 123 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
+L + FSGG + R+ + +L + P+I+A I+ QL+ + P + L+K GE+GRK++
Sbjct: 64 RGILDMFNMFSGGAVERMAVFALNVTPYISASIIVQLMGSVYPPWEKLKKEGGESGRKQL 123
Query: 183 LQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL---TSVTLLTLGSAFTTYIGERIS 239
QYTRY +V A+ Q+ G + L N + + T+V LT G+ F ++GE+++
Sbjct: 124 NQYTRYLTVILALAQSFGIAVGLNAQPNLVDSPGIFFLATTVVSLTGGTMFLMWLGEQVT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQE 298
+GNG SL+IF I++ LP + GR + A Q + L I++ + +V+ IV+++
Sbjct: 184 ARGVGNGISLIIFAGIVAVLPGTIGRLLGLAEQGQISAFALLFIVVMVVAVVVFIVFMER 243
Query: 299 AERKIPINYASRYT-SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--- 354
A+R++ I Y R +R G +RS +LP KVN++GV+P IF++S L LP T+A F
Sbjct: 244 AQRRLLIQYPKRQEGNRMAGGERS-FLPLKVNTAGVIPPIFASSLLLLPSTVANFAATAN 302
Query: 355 ----IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
+A L A L G ++ LLI FF ++YT + +P+D +E L++ G +P
Sbjct: 303 LPAWLAWLPTVAAQLTHGQPLFMVLYALLIVFFCFFYTSITFNPEDTAENLRKYGGFLPG 362
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+RPGK TA +L VL+R++V+G+ ++ + P ++ + F GTSVLI+V
Sbjct: 363 IRPGKRTAEYLDYVLTRLTVIGAAYITAVCLLPEIVSANFGQGLY--FGGTSVLIVVSVT 420
Query: 471 TDTARKVQAEIISQKYKNI 489
DT ++Q+++++ +Y+ +
Sbjct: 421 MDTVAQIQSQLLAHQYEGL 439
>gi|170718269|ref|YP_001785287.1| preprotein translocase subunit SecY [Haemophilus somnus 2336]
gi|168826398|gb|ACA31769.1| preprotein translocase, SecY subunit [Haemophilus somnus 2336]
Length = 441
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 246/414 (59%), Gaps = 14/414 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ L+Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLLEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRY+++ A VQAIG
Sbjct: 79 ALGIMPYISASIIIQLLTTVHPALAEL-KKEGEAGRRKISKYTRYSTLVLATVQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q ++ + +I + V +V+ + +R+I + YA R R
Sbjct: 198 PSAIGQTIEQARQGQMHLLVLLLIAVIVFAVTYFVVFFERGQRRIKVEYAKRQQGRQIVG 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
S +LP KVN +GV+P IF++S + P TL + G + L + ++ L+PG YL
Sbjct: 258 GHSTHLPLKVNMAGVIPAIFASSIILFPATLTSWFGQGSNLEWLTELSLLLHPGQPLYLI 317
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G +
Sbjct: 318 VYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIGGL 377
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 378 YITFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|126740818|ref|ZP_01756503.1| protein translocase subunit SecY [Roseobacter sp. SK209-2-6]
gi|126718114|gb|EBA14831.1| protein translocase subunit SecY [Roseobacter sp. SK209-2-6]
Length = 447
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 237/419 (56%), Gaps = 23/419 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 16 LRNRILFTLGLLIVYRLGTFIPVPGIDAAALQEFMEQAGQGIGGMVSMFTGGALGRMGIF 75
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTRY +V A Q+ G +
Sbjct: 76 ALGIMPYISASIIIQLLTSMVPALEQL-KKEGEQGRKKINQYTRYGTVLLATAQSYGLAV 134
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D +TD + L + L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 135 SLES--GDLATDPGLYFRLACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAEV 192
Query: 260 PASFGRTVAE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
PAS + A A IG+ ++I+ I+ V V+++ A RKI I Y R
Sbjct: 193 PASIAQFFASGRSGAISPAVIIGVIFMVIAVIMFV---VFMERALRKIHIQYPRRQVGMK 249
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSF 371
S++LP KVN +GV+P IF++S L LP T++ F+ A + PG
Sbjct: 250 VYDGGSSHLPVKVNPAGVIPAIFASSLLLLPTTISTFSSGATSGPIMSWLLANFGPGQPL 309
Query: 372 YLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL + +I FF Y+YTF + P+DV+ LK Q +P +RPGK TA +++ V++R+ V
Sbjct: 310 YLLFFVGMIVFFAYFYTFNVAFKPEDVANNLKNQNGFVPGIRPGKKTAEYIEYVVNRVLV 369
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
LGS +LA++ P V+ + F GTSVLI+V DT ++ Q+ +++ +Y+ +
Sbjct: 370 LGSGYLALVCLLPEVLRGQFAFPVY--FGGTSVLIVVSVTMDTIQQAQSHLLAHQYEGL 426
>gi|456013292|gb|EMF46951.1| preprotein translocase secY subunit [Planococcus halocryophilus
Or1]
Length = 431
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 246/419 (58%), Gaps = 31/419 (7%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
F LL L + R+G ++P+ V+ DQ L+ L++F GG + I ++GI+P
Sbjct: 19 FFTLL-MLIIFRVGTFVPVPNVDASVLQAT-DQMGLVGFLNTFGGGALANFSILAMGIMP 76
Query: 150 FINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-----L 203
+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +QAIG +
Sbjct: 77 YITASIIVQLLQMDVVPKFAEWAK-QGEVGRRKLAQFTRYFTIVLAFIQAIGMSYGFNQM 135
Query: 204 YLRPYV-NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
Y + ND + +V+ ++ +LT G+AF ++GE+I+ +GNG S++IF I++ +P +
Sbjct: 136 YGGSLIQNDTISTYVVIAI-VLTAGTAFLLWLGEQITAKGVGNGISIIIFAGIVAAIPGA 194
Query: 263 FGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSR-- 314
+ A+ Q N +A + ++ + + + ++YVQ+A RKIPI YA R R
Sbjct: 195 INQLYAQQIQGAGDQLPINIAIMALLALAVVAITVLVIYVQQALRKIPIQYAKRVAGRGQ 254
Query: 315 --SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFY 372
SG + +LP KVN++GV+P+IF+ + + P T+A F G A +A + +
Sbjct: 255 TASG---QQTHLPLKVNAAGVIPVIFAVAFIITPQTIASFFGANAFTEA---IQNTFDYT 308
Query: 373 LPTNIL----LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
P ++ LI F Y+Y F+Q++P++VS+ LK+QGA IP +RPGK+T +L +VL R+
Sbjct: 309 RPVGMIIYVALIVAFTYFYAFIQVNPENVSDNLKKQGAYIPGIRPGKNTQDYLTSVLYRL 368
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ +G++FLAI+A P +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 369 TFVGAIFLAIIAVLPIFFINVANLPQSAQIGGTSLLIVVGVALETMKQLESQLVKRHYK 427
>gi|253577199|ref|ZP_04854519.1| preprotein translocase, SecY subunit [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843443|gb|EES71471.1| preprotein translocase, SecY subunit [Paenibacillus sp. oral taxon
786 str. D14]
Length = 433
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 236/402 (58%), Gaps = 17/402 (4%)
Query: 101 RLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G ++P+ GVN+E F N N+LL L++FSGG + I +LGI+P+I A I+ Q
Sbjct: 29 RIGSFVPVPGVNKEVFEATNNAAGNNLLGLLNTFSGGALKNFSIFALGIMPYITASIIVQ 88
Query: 159 LLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-----QVLYLRPYVNDF 212
LL+ + PK + K +GE G+KK+ Q TRY +V A++QA LY V +
Sbjct: 89 LLSMDVIPKFAEWAK-QGEHGKKKMAQVTRYGTVILALIQAFATSIGFNRLYGTEMVPNA 147
Query: 213 STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA-- 270
+ L +LT G++F ++GE+I++ +GNG SL+IF I++ +P T+A++
Sbjct: 148 TFGDYLVIAIVLTAGTSFLMWLGEQITERGIGNGISLIIFAGIVASIPTHI-TTIAQSDF 206
Query: 271 FQDG----NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
+G N + I++ IL+V+G++YVQ+A RKIP+ YA R ++ ++P
Sbjct: 207 IIEGQPFINVVKSIAILLVCILIVIGVIYVQQAIRKIPVQYAKRVVGNKMYGGQNTHIPL 266
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLPTNILLIAFFNY 385
K+N++GV+P+IF+ S L P +A F A + L+ + +++I F +
Sbjct: 267 KINAAGVIPVIFAVSLLQFPVVIASFWSTHAWAQWITTHLSTNRPLGMVLYVIMIIGFTF 326
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+YTF+Q++P ++E +K+ G IP +RPGK+T +L VL+R+++ G++FLA ++ P
Sbjct: 327 FYTFVQMNPQQMAENMKKNGGYIPGIRPGKATETYLTRVLTRLTMTGALFLAAISILPMG 386
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ L + GTS+LI++G A DT + ++ ++I + YK
Sbjct: 387 LGAIAGLPSTVLIGGTSILIVIGVALDTMKTIEGQLIKRHYK 428
>gi|218289986|ref|ZP_03494163.1| preprotein translocase, SecY subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|218239971|gb|EED07158.1| preprotein translocase, SecY subunit [Alicyclobacillus
acidocaldarius LAA1]
Length = 430
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 247/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L + L L LA+ R+G YIP+ G+N A N+L S L+ FSGG R I ++
Sbjct: 14 LRKRILFTLMVLAVYRIGTYIPVPGMNVSALNAGAGNNALFSLLNMFSGGAFYRFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVL 203
+ P+I A I+ QLL + P+ ++ QK EGE+GR+K+ Q TRY +V ++QA G +
Sbjct: 74 SVTPYITASIIVQLLQSGVIPRFEEWQK-EGESGRQKLTQVTRYLTVALGLLQAAGFTYM 132
Query: 204 YLR-----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ R P N++ + +V+ VTL T G + GE I++ +GNG SLLIFTSI+S
Sbjct: 133 FARSGLLLPGANNWWS-YVVIVVTL-TAGDTLLMWFGEMITEKGVGNGISLLIFTSILSR 190
Query: 259 LPASFGRTVAEAF--QDGN-YIGL--ATIIISFILLVLG-IVYVQEAERKIPINYASRYT 312
A F Q G+ ++G+ I+I+ I+++ IV+VQ+AERKIP+ YA R
Sbjct: 191 FSTLGQEVYANWFMNQSGHLFLGILKTLILIAGIVVIFALIVFVQQAERKIPVQYAKRVV 250
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA-LNPGGSF 371
R+ + +Y+P K+ ++GV+P+IF+ S L LP T+A + + + L+P +
Sbjct: 251 GRTVYSGQQSYIPIKLLAAGVIPVIFAISLLFLPYTIASYFQSHHWAEFILRYLSPQTGW 310
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
++ ++LI F ++YT +Q++P ++EQL++ IP VRPG T ++ V++R++V
Sbjct: 311 FMGAEVILIILFTFFYTHVQINPQQLAEQLQKHAGFIPGVRPGHETEMYIIKVINRVTVF 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GSVFL +++ P ++ +LT + GTS++ILVG A T ++++ +++ ++Y+
Sbjct: 371 GSVFLGVISVLPFILLGAMNLTDYN-IQGTSLIILVGVALQTMQQMEGQLLQRQYR 425
>gi|410622869|ref|ZP_11333690.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410157544|dbj|GAC29064.1| preprotein translocase subunit SecY [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 436
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 244/416 (58%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ ++ FSGG + R +
Sbjct: 17 LKARLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQQKGTIVEMMNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL+ + P L +L K+EGEAG++K+ QYTRY ++ AI Q++G
Sbjct: 77 ALGIMPYITASIIVQLLSHMYPPLMEL-KKEGEAGKRKISQYTRYLTLMLAIFQSVGIAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T++ L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P + G+T AE + G L ++I I++ L +V+V+ A+R+I +NYA R R
Sbjct: 196 PTAIGQT-AEQARLGEINLLFLLVIGAIIVALTYLVVFVERAQRRIVVNYAKRQQGRKVF 254
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S++LP KVN +GV+P IF++S + PGTLA G + L ++AL+PG Y+
Sbjct: 255 AAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLALSPGQPLYV 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G+
Sbjct: 315 MLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYIDKVMTRLTLAGA 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+ D +VQ ++S +Y ++
Sbjct: 375 LYITFVCLVPEFLLLWFNVPFY--FGGTSLLIICVVVMDFMAQVQTHLMSHQYGDV 428
>gi|121534653|ref|ZP_01666474.1| preprotein translocase, SecY subunit [Thermosinus carboxydivorans
Nor1]
gi|121306673|gb|EAX47594.1| preprotein translocase, SecY subunit [Thermosinus carboxydivorans
Nor1]
Length = 418
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 227/403 (56%), Gaps = 9/403 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L + R G +IP+ GVN +L LD FSGG + + + ++ I
Sbjct: 17 KVLFTLAMFLVFRAGTHIPVPGVNPAVIEQLFTTGNLFGFLDLFSGGALSKFSVFAMSIT 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL + PK + K EGE GRKK+ Q TRY +V +QA+G L+
Sbjct: 77 PYINASIIMQLLTVVVPKFEQWAK-EGEEGRKKITQVTRYGTVLLGFIQALGMAYGLKVA 135
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ + +L LT G+ F ++GE+I+D +GNG SL+IF I+S LP G V
Sbjct: 136 IINPGIASILLIALTLTAGTTFLMWLGEQITDKGIGNGISLIIFAGIVSRLPN--GLFVI 193
Query: 269 EAFQDGNYIGLATIIISFILLVLGIVYV---QEAERKIPINYASRYT-SRSGGLQRSAYL 324
+ I + + + I+ V +V+V + +RKIP+ YA R +R G R+ ++
Sbjct: 194 YQYLKAGTITIFNVALFAIIAVTMVVFVIAISQGQRKIPVQYAKRVVGNRMYGGHRT-HI 252
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFN 384
P +VN +GV+PIIF++S L P T+A+F + +K A G LLI FF
Sbjct: 253 PLRVNQAGVIPIIFASSVLMFPVTIAQFINVDWVKTVAGWFAWGTPLQTTLYALLIIFFT 312
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
Y+YT + ++ D++E +K+ G IP +RPGK TA +L +++RI++ G++FLAI+A P
Sbjct: 313 YFYTAVTMNISDMAENMKKYGGFIPGLRPGKPTADYLDRIMTRITLAGAIFLAIIAILPN 372
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ T++ F GT++LI+VG A DT ++++A ++ + Y+
Sbjct: 373 FVVWATNIQGVY-FGGTALLIVVGVALDTMKQIEALVLMRHYQ 414
>gi|294675879|ref|YP_003576494.1| preprotein translocase subunit SecY [Rhodobacter capsulatus SB
1003]
gi|294474699|gb|ADE84087.1| preprotein translocase, SecY subunit [Rhodobacter capsulatus SB
1003]
Length = 456
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 239/413 (57%), Gaps = 25/413 (6%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
+G L + RLG YIP+ G++ +A +++ S + L F+GG +GR+G+ +LGI+P+I
Sbjct: 31 IGLLIIYRLGTYIPVPGIDADALRDFMERASQGIGGMLSMFTGGALGRMGVFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QL+ + P L+ + K+EGE GRKK+ Q TRY++VG A QA G L Y
Sbjct: 91 SASIIVQLMTALVPALEQM-KKEGEQGRKKINQITRYSTVGLATFQAWGLATSL--YNGG 147
Query: 212 FSTD------WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+TD ++++ V L G+ F ++GE+I+ +GNG SL+IF I++ +PA+
Sbjct: 148 MATDAVPHLFFIVSVVVTLVGGTMFLMWLGEQITARGIGNGVSLIIFVGIVAEIPAAAAS 207
Query: 266 TVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
A+ GN IG+ ++I+ I V V+++ A RKI I Y R
Sbjct: 208 FFAQGRAAGNSSIPVTIGVLVMMIAVIAFV---VFMERALRKIHIQYPRRQVGMKIYDGS 264
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--IAALKKAAVA-LNPGGSFYLPTNI 377
S++LP KVN +GV+P IF++S L LP T++ F+G + +A PG YL
Sbjct: 265 SSHLPIKVNPAGVIPAIFASSLLLLPTTISTFSGDNTGPIMSTILAYFGPGQPLYLAFYA 324
Query: 378 LLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+I FF Y+YT + D+V++ LK QG IP +RPGK T +L V++RI V+GS +L
Sbjct: 325 GMIVFFAYFYTANVTFKSDEVADNLKNQGGFIPGIRPGKKTEDYLDYVVARILVIGSAYL 384
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A++ P +++ T L F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 385 ALVCLLPTILQ--TELGVPFYFGGTSVLIVVSVTMDTINQVQSHLLAHQYEGL 435
>gi|397905085|ref|ZP_10505957.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Caloramator
australicus RC3]
gi|397161880|emb|CCJ33291.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Caloramator
australicus RC3]
Length = 389
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 226/387 (58%), Gaps = 13/387 (3%)
Query: 110 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQD 169
G+N + +DQ L LD SGG I ++GIVP+IN+ I+F LL P+L++
Sbjct: 3 GINLDQLKQLVDQGLLFGFLDIISGGAFKEFSIFAMGIVPYINSSIIFSLLVIAIPRLEE 62
Query: 170 LQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW--VLTSVTLLTLG 227
L K +GE GRKK+ +YTRY +V FA++Q+ LYLR W +L + LT G
Sbjct: 63 LSK-QGEEGRKKIAEYTRYGTVVFALIQSFSIALYLRNNGALLDNSWGQILLIMITLTAG 121
Query: 228 SAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIIS 285
+ F ++GE+I++ +GNG+S++IF I++ +P + G ++ A + G NYI + +
Sbjct: 122 TTFVMWLGEKITEYGIGNGSSMIIFAGILARIP-TMGYSIGVAIKGGTANYIEVILFLAF 180
Query: 286 FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLAL 345
+L++ G+V + ER+IP+ YA R +S ++P +NS+GV+ IIF+ S L
Sbjct: 181 AVLVIAGVVAMDLGERRIPVQYAQRKVGMRTYGGQSTHIPINLNSAGVIAIIFAISVLQF 240
Query: 346 PGTLARFT-----GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQ 400
P + + T + AL + L+P G Y I LI FF ++YT + PD+V++
Sbjct: 241 PQIITQLTLEPTHPVYALFNSGF-LSPKGWVYPIVYIFLIIFFTWFYTSVTFKPDEVAQN 299
Query: 401 LKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAG 460
L++ G IP +RPGK T +L +++R++V+G F +++A P V++ THL + F G
Sbjct: 300 LQKSGGFIPGLRPGKPTEEYLTRIINRMTVIGGFFASLVAVLPIVLQHVTHLGNIQ-FGG 358
Query: 461 TSVLILVGCATDTARKVQAEIISQKYK 487
T++LI+VG A + +++ A++ + Y+
Sbjct: 359 TALLIVVGVALELNKQLTAQLSMRHYE 385
>gi|148652258|ref|YP_001279351.1| preprotein translocase subunit SecY [Psychrobacter sp. PRwf-1]
gi|148571342|gb|ABQ93401.1| protein translocase subunit secY/sec61 alpha [Psychrobacter sp.
PRwf-1]
Length = 443
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L L+G L + RLG +IP+ G+N + + ++N++LS + FSGG + R+ I +LG
Sbjct: 28 RLLFLIGALVVYRLGSHIPVPGINPVSLADLFSRNENTILSMFNMFSGGALERMSIMALG 87
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q+++ + P L+ L K+EGEAGR+K+ +YTR ++ A +QAI L
Sbjct: 88 IMPYISASIIVQMMSAVLPSLEAL-KKEGEAGRRKLNKYTRQGTLFLASIQAIFMCTGLI 146
Query: 207 PYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
S+ + + +V+ L G+ F ++GE+I++ +GNG S+LIF SI+S +P+ G
Sbjct: 147 SQNLTLSSGLTFYIPAVSSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVSSVPSMLG 206
Query: 265 RTVAEAFQDGNYIGLATIIISFILLVLGI------VYVQEAERKIPINYASRYT-SRSGG 317
++ D ++I+ I VLGI V+++ A+R+IP+NYA + R
Sbjct: 207 QSFEMVKNDPQ-----SLIVLLIFAVLGIAVTAGIVFIERAQRRIPVNYAQKQQLGRKIY 261
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGG 369
+ ++LP K+N +GV+P IF+++ L P +L ++ G +A L+ ++ L PG
Sbjct: 262 ADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNSADPSTWQQILQTMSLVLAPGQ 321
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YT L P +V+E LKR GA IP +RPG T +L VL+R++
Sbjct: 322 PLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGLQTQRYLDHVLNRLT 381
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+G++++ + P +++ + + G GTS+LI+V D ++QA +++ +Y +
Sbjct: 382 FIGAIYMTAICLMPMLLQSSFGIPFHLG--GTSLLIMVVVVMDFISQLQAHLMTHQYHD 438
>gi|418607973|ref|ZP_13171191.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
gi|374403134|gb|EHQ74143.1| preprotein translocase, SecY subunit [Staphylococcus epidermidis
VCU057]
Length = 430
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 240/408 (58%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILVFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>gi|261211131|ref|ZP_05925420.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
gi|260839632|gb|EEX66243.1| preprotein translocase SecY subunit [Vibrio sp. RC341]
Length = 444
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIIEMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|406992274|gb|EKE11658.1| hypothetical protein ACD_15C00043G0005 [uncultured bacterium]
Length = 423
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 233/411 (56%), Gaps = 14/411 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L ++ L + RL IP+ GVN++ + N L+ FSGGG+ + I L
Sbjct: 14 LRNKILFIIAILVIFRLIAAIPIPGVNQDQLKSFFENNQFFGLLNLFSGGGLSSISIVML 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
G+ P+I + I+ QLL I P+L+ + K EGEAGR+K Q+TR+A+V A +Q G + L
Sbjct: 74 GVGPYITSSIIMQLLTMIFPRLEQIYKEEGEAGRQKFNQWTRWATVPLAAMQTFGMISLL 133
Query: 206 RP--YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
R + S + + +++ G+ ++GE I++ K+GNG S++IF I++ LP+S
Sbjct: 134 RSQNILGQISNFEMFSIISVAVAGTILLMWLGELITEKKIGNGVSIIIFAGIVAGLPSSL 193
Query: 264 GRTVA--EAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRS 321
+ A ++ Q YI L ++I+ I GIV + E +R IP++YA R S
Sbjct: 194 SQLSATFDSSQLFTYIILLAVVIAAI---SGIVTITEGQRNIPVSYAKRIRGNKMYGGSS 250
Query: 322 AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG------IAALKKAAVALNPGGSFYLPT 375
+LP +VN +GV+PIIF+ S + PG +A F +A + ++ + FY
Sbjct: 251 THLPLRVNQAGVIPIIFAMSIMLFPGMIANFLATSSNEVVANIARSVGNVFQNQIFYGSA 310
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+ F Y+YT + DP +SE L++QG IP +RPGK+TA +L +++RI++ G++F
Sbjct: 311 YFILVVAFTYFYTSVVFDPHKISESLQKQGGYIPGIRPGKNTAEYLYRIINRITLSGALF 370
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
L I+A P +I+ + + + GT +LI+V +T ++++ +++ + Y
Sbjct: 371 LGIIAVLPFIIQGFSSIKSI-SIGGTGLLIVVSVVIETVKQIEGQLVMRDY 420
>gi|258622733|ref|ZP_05717751.1| preprotein translocase subunit secY [Vibrio mimicus VM573]
gi|258625760|ref|ZP_05720639.1| preprotein translocase subunit secY [Vibrio mimicus VM603]
gi|262166597|ref|ZP_06034334.1| preprotein translocase SecY subunit [Vibrio mimicus VM223]
gi|262170487|ref|ZP_06038165.1| preprotein translocase SecY subunit [Vibrio mimicus MB-451]
gi|424809410|ref|ZP_18234791.1| preprotein translocase SecY [Vibrio mimicus SX-4]
gi|449144186|ref|ZP_21775002.1| preprotein translocase subunit SecY [Vibrio mimicus CAIM 602]
gi|258581998|gb|EEW06868.1| preprotein translocase subunit secY [Vibrio mimicus VM603]
gi|258584921|gb|EEW09652.1| preprotein translocase subunit secY [Vibrio mimicus VM573]
gi|261891563|gb|EEY37549.1| preprotein translocase SecY subunit [Vibrio mimicus MB-451]
gi|262026313|gb|EEY44981.1| preprotein translocase SecY subunit [Vibrio mimicus VM223]
gi|342323344|gb|EGU19129.1| preprotein translocase SecY [Vibrio mimicus SX-4]
gi|449080122|gb|EMB51040.1| preprotein translocase subunit SecY [Vibrio mimicus CAIM 602]
Length = 444
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 244/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|422911395|ref|ZP_16946017.1| preprotein translocase subunit SecY [Vibrio cholerae HE-09]
gi|424661063|ref|ZP_18098309.1| preprotein translocase subunit SecY [Vibrio cholerae HE-16]
gi|341631365|gb|EGS56259.1| preprotein translocase subunit SecY [Vibrio cholerae HE-09]
gi|408049639|gb|EKG84830.1| preprotein translocase subunit SecY [Vibrio cholerae HE-16]
Length = 444
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 244/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PSAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|429737059|ref|ZP_19270932.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
138 str. F0429]
gi|429153499|gb|EKX96281.1| preprotein translocase, SecY subunit [Selenomonas sp. oral taxon
138 str. F0429]
Length = 418
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 236/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGHKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R
Sbjct: 185 ALPKNIG-TIYAYVKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPITYAKRVVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
S+++PFKVN +GV+PIIF++S L P T+A+F + +K AA L G
Sbjct: 244 MASGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDVPWVKTAAAYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVLMIIFFTYFYTSVTVKIPDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ T++ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNMVAGATNIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 414
>gi|406942210|gb|EKD74500.1| hypothetical protein ACD_44C00424G0007 [uncultured bacterium]
Length = 435
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 251/415 (60%), Gaps = 16/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L +L L + R+G +IP+ G+N + N +N ++S + FSGG + +L +
Sbjct: 19 LKQRLLFVLIALIVYRIGCHIPVPGLNPAKLIDLFNQHKNGIISLFNMFSGGALSKLTVF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L+K EGEAGR+K+ QYTR ++ A +QA+G
Sbjct: 79 ALGIMPYISASIIMQLLTVVYPALEQLRK-EGEAGRRKINQYTRKGTLLIATIQALGMCR 137
Query: 204 YLRPY---VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+L +N + + + +++L+T G+ F ++GE++++ +GNG SLLIF I+S LP
Sbjct: 138 WLVGQGIALNPGFSFYFIATLSLVT-GTLFLMWLGEQMTERGIGNGISLLIFAGIVSRLP 196
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFIL--LVLGIVYVQEAERKIPINYASRYTSRSGGL 318
A+ + E + G LA ++I F++ + L +V+++ +R+I INYA R R
Sbjct: 197 AAV-VALMEQVRQGQIQFLALLVIVFVICSVTLFVVFMERGQRQITINYAQRQQGRKMYA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLP 374
+ ++LP K+N +GV+P IF+++ + LP TL ++ G+ L + +AL+PG Y+
Sbjct: 256 AQMSHLPLKINMAGVIPPIFASAIILLPATLTQWFSEVKGMGWLSELGLALSPGQPLYML 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I F + YT L +P + ++ LK+ GA IP +RPG+ +A ++ V+SR++++G+
Sbjct: 316 LYASAIIAFCFIYTALVFNPKETADNLKKSGAYIPGIRPGEQSAKYIDGVMSRLTLVGAA 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ +++ P ++ H+ + F GTS+LI+V D + QA ++S +Y+++
Sbjct: 376 YITLVSILPEFMQVIWHVPFY--FGGTSLLIIVLVVMDFMSQTQAHLMSHQYESL 428
>gi|332798225|ref|YP_004459724.1| preprotein translocase subunit SecY [Tepidanaerobacter
acetatoxydans Re1]
gi|438001143|ref|YP_007270886.1| Preprotein translocase secY subunit (TC 3.A.5.1.1)
[Tepidanaerobacter acetatoxydans Re1]
gi|332695960|gb|AEE90417.1| preprotein translocase, SecY subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432177937|emb|CCP24910.1| Preprotein translocase secY subunit (TC 3.A.5.1.1)
[Tepidanaerobacter acetatoxydans Re1]
Length = 417
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/410 (35%), Positives = 239/410 (58%), Gaps = 26/410 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
KF L+ L L R+G ++P+ ++ A +++ +LL D SGG + + ++ I
Sbjct: 19 KFTALM--LMLFRVGTFVPVPRMDPNAVRAMIEKGALLGFFDIISGGAFKQFSVFAMSIT 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I+ QLL + PK ++L K EGEAGRK + QYTRY +V ++QA G + +
Sbjct: 77 PYINASIIIQLLTIVIPKWEELAK-EGEAGRKVLAQYTRYGTVILGLIQATGLSIGFKSA 135
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+ ++ ++L T G+AF ++GE+I+D +GNG SLLIF I+S LPAS V
Sbjct: 136 MKPGILSNIVVIISL-TAGTAFLMWLGEQITDKGIGNGISLLIFAGIVSRLPAS----VL 190
Query: 269 EAFQDGNYIGLATIIISFILLVLGIVYV------QEAERKIPINYASRYTSRSGGLQRSA 322
+ + +G I + I +LG+V + QEAER++P+ YA R R +S
Sbjct: 191 QVYSLLK-VGTLNIFMLAIFAILGVVVIVAVIAVQEAERRVPVQYAKRVVGRKVYGGQST 249
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIA 381
++P KVN++GV+P+IF+ S L P TLA F + A L+P G Y LLI
Sbjct: 250 HIPIKVNAAGVIPVIFAMSILMFPSTLAGFFPNNKIMTSIAEFLSPSGWLYAVLYALLIV 309
Query: 382 FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAA 441
FF Y+YT + +P +V++ +K+ G IP +RPG+ TA ++ +++RI+++G++FLA +A
Sbjct: 310 FFTYFYTAITFNPVEVADNMKKYGGFIPGLRPGRPTAEYISRIMNRITLVGAIFLAAIAL 369
Query: 442 GPAVIEQTTHLTAFRG----FAGTSVLILVGCATDTARKVQAEIISQKYK 487
P +TA G F GT++LI+VG A +T + ++A+++ + Y+
Sbjct: 370 LP------YFMTAISGVNISFGGTALLIVVGVALETMKAIEAQMLMRHYQ 413
>gi|410638627|ref|ZP_11349186.1| preprotein translocase subunit SecY [Glaciecola lipolytica E3]
gi|410141791|dbj|GAC16391.1| preprotein translocase subunit SecY [Glaciecola lipolytica E3]
Length = 439
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 244/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDANVLAQLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 77 ALGIMPYISASIIMQLLTVVHPPMMEL-KKEGEAGRRKISQYTRYFTLVLATFQAIGIAT 135
Query: 204 YLRPYVNDFST----DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + T+V L G+ F ++GE+I++ +GNG S+LIFT I++ L
Sbjct: 136 NLPNLISGLVIAPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFTGIVAGL 195
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T +A Q D N + L I + I + +V+V+ +R+I +NYA + R
Sbjct: 196 PTAIGQTAEQARQGDLNVLLLLLIGVIIIAITYFVVFVERGQRRIVVNYAKKQQGRKVFA 255
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGT+A + G + L+ A+ L+PG Y+
Sbjct: 256 AQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQNESFSWLQDVALMLSPGQPLYVM 315
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G++
Sbjct: 316 LYATAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYIDKVMTRLTLAGAL 375
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 YITFICLVPEFMLIAWNVQFY--FGGTSLLIIVVVIMDFMAQVQTHLMSHQYESV 428
>gi|295702370|ref|YP_003595445.1| preprotein translocase subunit SecY [Bacillus megaterium DSM 319]
gi|294800029|gb|ADF37095.1| preprotein translocase, SecY subunit [Bacillus megaterium DSM 319]
Length = 430
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 249/415 (60%), Gaps = 24/415 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
F LL L + R+G +IP+ VN + D ++ L++F GG + I ++GI+P
Sbjct: 19 FFTLL-MLIVFRIGTFIPVPSVNTDVLKLQ-DGLNVFGVLNTFGGGALKNFSILAMGIMP 76
Query: 150 FINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--- 205
+I A I+ QLL + PK + K +G+ GR+K+ Q TRY ++ +QA+G +
Sbjct: 77 YITASIIVQLLQMDVVPKFTEWSK-QGDVGRRKLAQVTRYGTIVLGFIQALGMSIGFNNI 135
Query: 206 ---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
+ N + ++L + T+LT G+AF ++GE+I+ +GNG S++IF I + +P +
Sbjct: 136 SGGQLIANPGISTYLLIA-TVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAAGIPTT 194
Query: 263 FGRTVAEAFQD-GN--YIGLATII---ISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+ A+ F+D G+ +I + T++ I+ + +++G++Y Q+A RKIPI YA R+
Sbjct: 195 LNQIYAQQFEDVGDQLFIRIVTVVLIAIAVLAIIVGVIYFQQALRKIPIQYAKGSAGRNP 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
+S +LP KVN++GV+P+IF+ S + P T+A F G A ++ P G
Sbjct: 255 VGGQSTHLPLKVNAAGVIPVIFAVSFIITPPTIASFFGPNDVTAWIQNTFDYTKPIG--- 311
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + LI F Y+YTF+Q++P+ V+E LK+QG IP +RPGKST A+L VL R++++G
Sbjct: 312 MIVYVALIIAFCYFYTFVQVNPEQVAENLKKQGGYIPGIRPGKSTQAYLTKVLYRLTLIG 371
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
S+FLA++A P + + +L + GTS+LI+VG A +T ++++++++ + YK
Sbjct: 372 SIFLALIAVLPVLFIKIANLPSSAQIGGTSLLIVVGVALETMKQLESQLVKRHYK 426
>gi|291286331|ref|YP_003503147.1| preprotein translocase subunit SecY [Denitrovibrio acetiphilus DSM
12809]
gi|290883491|gb|ADD67191.1| preprotein translocase, SecY subunit [Denitrovibrio acetiphilus DSM
12809]
Length = 436
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 236/411 (57%), Gaps = 19/411 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
+ L L +L + R+G ++P G++ EA Q S LL D F+GG + +L + LG
Sbjct: 17 RILWTLFFLFVYRIGAHVPTPGIDGEALSQFFAQQSGNLLGFFDMFTGGALSKLTVFGLG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ +L+ P L +L+KR G+ GR K+ +YTRY +V ++VQ +G + L
Sbjct: 77 IMPYISAAIILELMTVAVPHLAELKKR-GQEGRDKITRYTRYGTVAISLVQGMGIAIGLE 135
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V T + + + LT G+ F ++GE+IS+ LGNG S++IF II+
Sbjct: 136 GMTSPGGSPVVMFPGTGFRIVTAITLTTGTVFLMWLGEKISEKGLGNGISVIIFAGIIAG 195
Query: 259 LPASFGRTVAEAFQDGNYIGLATII--ISFILLVLG-IVYVQEAERKIPINYASRYTSRS 315
P++ RT+ Q G + L TII ++ IL V IV+++ + R++PI Y +
Sbjct: 196 FPSAVSRTLTLV-QTGE-VQLITIIAVLAIILAVTAAIVFMETSSRRLPIQYVRKGGGGK 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G + S YLP K+N +GV+PIIF+ S LA P TLA F+ ++K + L+P Y
Sbjct: 254 GNVATS-YLPLKLNPAGVIPIIFAMSILAFPSTLASFSENLLVQKISFFLSPSSWVYYAV 312
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ I FF Y+YT + +PDD++E + + G IP RPG TA F+ LSR++ +G+++
Sbjct: 313 TLGFIIFFTYFYTSIIFNPDDIAENINKSGGVIPGKRPGVETAKFIDFTLSRLTFVGALY 372
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
L +A P +I + ++ + F GTS+LI++G D K++A +++ Y
Sbjct: 373 LGAVAILPQLIIRGFNVPFY--FGGTSILIVIGVGMDVISKIEAHLVTHNY 421
>gi|343927713|ref|ZP_08767181.1| preprotein translocase SecY subunit [Gordonia alkanivorans NBRC
16433]
gi|404259095|ref|ZP_10962409.1| preprotein translocase SecY subunit [Gordonia namibiensis NBRC
108229]
gi|343762354|dbj|GAA14107.1| preprotein translocase SecY subunit [Gordonia alkanivorans NBRC
16433]
gi|403402489|dbj|GAC00819.1| preprotein translocase SecY subunit [Gordonia namibiensis NBRC
108229]
Length = 442
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 246/427 (57%), Gaps = 33/427 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDSFSGGGIGRLGI 142
K L +LG + L RLG +P GV+ +A LD+ +S+ S ++ FSGG + +L +
Sbjct: 17 KILFVLGIIILYRLGATVPSPGVDYQAVRACLDEVSAGESSSVYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + P+ + L+K EG+AG+ K+ QYTRY +V A++Q+ G V
Sbjct: 77 FAIGIMPYITASIIVQLLTVVIPRFEQLRK-EGQAGQAKMTQYTRYLAVALALLQSTGIV 135
Query: 203 LY-----LRP--------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
L P +ND S ++ V ++T G+ + GE I++ +GNG SL
Sbjct: 136 ALADRGQLLPQSCATSGEVLNDSSIFGLMIIVLVMTAGACVVMWFGELITERGIGNGMSL 195
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
LIF I + +PA GRT+ G + A + ++ +++V G+V++++ +R+IP+ YA
Sbjct: 196 LIFAGIAARIPAE-GRTILNT--RGGLV-FALVCVAALIIVAGVVFIEQGQRRIPVQYAK 251
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVA- 364
R R S YLP KVN +GV+P+IF++S L LP + T G + + V
Sbjct: 252 RMVGRKMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPQLIVELTRSTDGTQSTWQEYVTK 311
Query: 365 --LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+P Y+ L+I FF Y+Y + +P++ ++++K+ G IP +RPG TA +L
Sbjct: 312 YLTDPSNGVYIAVYFLMIIFFTYFYVAVTFNPEERADEMKKYGGFIPGIRPGAPTAEYLG 371
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAE 480
VLSRI++ GS++L I+A P + + + + F GT+VLI+VG DT +++ ++
Sbjct: 372 YVLSRITLPGSIYLGIIAVLPNLFLEIGNSGNVQNLPFGGTAVLIMVGVGLDTMKQINSQ 431
Query: 481 IISQKYK 487
++ +KY+
Sbjct: 432 LMQRKYE 438
>gi|56707498|ref|YP_169394.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89255690|ref|YP_513051.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica LVS]
gi|110669969|ref|YP_666526.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis FSC198]
gi|115314191|ref|YP_762914.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica OSU18]
gi|156501639|ref|YP_001427704.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|187932123|ref|YP_001892108.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254367072|ref|ZP_04983107.1| preprotein translocase secY [Francisella tularensis subsp.
holarctica 257]
gi|254370813|ref|ZP_04986818.1| hypothetical protein FTBG_00627 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874318|ref|ZP_05247028.1| secY, preprotein translocase, subunit Y, membrane protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|290953193|ref|ZP_06557814.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica URFT1]
gi|379716687|ref|YP_005305023.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis TIGB03]
gi|379716765|ref|YP_005305101.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725369|ref|YP_005317555.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis TI0902]
gi|385794107|ref|YP_005830513.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis NE061598]
gi|421754973|ref|ZP_16191931.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 80700075]
gi|422938186|ref|YP_007011333.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica FSC200]
gi|423050000|ref|YP_007008434.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica F92]
gi|56603990|emb|CAG44978.1| preprotein translocase, subunit Y, membrane protein [Francisella
tularensis subsp. tularensis SCHU S4]
gi|89143521|emb|CAJ78697.1| preprotein translocase, subunit Y, membrane protein [Francisella
tularensis subsp. holarctica LVS]
gi|110320302|emb|CAL08361.1| preprotein translocase, subunit Y, membrane protein [Francisella
tularensis subsp. tularensis FSC198]
gi|115129090|gb|ABI82277.1| preprotein translocase subunit Y [Francisella tularensis subsp.
holarctica OSU18]
gi|134252897|gb|EBA51991.1| preprotein translocase secY [Francisella tularensis subsp.
holarctica 257]
gi|151569056|gb|EDN34710.1| hypothetical protein FTBG_00627 [Francisella tularensis subsp.
tularensis FSC033]
gi|156252242|gb|ABU60748.1| preprotein translocase, SecY subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|187713032|gb|ACD31329.1| preprotein translocase, subunit Y, membrane protein [Francisella
tularensis subsp. mediasiatica FSC147]
gi|254840317|gb|EET18753.1| secY, preprotein translocase, subunit Y, membrane protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282158642|gb|ADA78033.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis NE061598]
gi|377826818|gb|AFB80066.1| Preprotein translocase secY subunit [Francisella tularensis subsp.
tularensis TI0902]
gi|377828364|gb|AFB78443.1| Preprotein translocase secY subunit [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828442|gb|AFB78521.1| Preprotein translocase secY subunit [Francisella tularensis subsp.
tularensis TIGB03]
gi|407293337|gb|AFT92243.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica FSC200]
gi|409089517|gb|EKM89557.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 80700075]
gi|421950722|gb|AFX69971.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
holarctica F92]
Length = 441
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 255/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L L+P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|83949768|ref|ZP_00958501.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
gi|83837667|gb|EAP76963.1| preprotein translocase SecY [Roseovarius nubinhibens ISM]
Length = 447
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 239/411 (58%), Gaps = 24/411 (5%)
Query: 94 LGYLALSRLGIYIPLGGVN----REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
LG L + RLG ++P+ G++ RE G S+ L F+GG +GR+GI +LGI+P
Sbjct: 24 LGLLIIYRLGTWVPVPGIDGAELREFMEG--AAASIGGMLSMFTGGALGRMGIFALGIMP 81
Query: 150 FINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP-- 207
+I+A I+ QL+ + P L+ L K+EGE GRKK+ QYTRY +V A +Q+ G + L+
Sbjct: 82 YISASIIVQLMTAMVPALEQL-KKEGEQGRKKINQYTRYGTVALATLQSYGLAVSLQSGG 140
Query: 208 YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+D ++ + + L G+ F +IGE+I+ +GNG SL+IF II+ LPA+ +
Sbjct: 141 LASDPGMFFIASCMITLVGGTMFLMWIGEQITARGIGNGISLIIFVGIIAELPAA----L 196
Query: 268 AEAFQDGNYIGLA-TIIISFILLVLG----IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
A+ F G ++ +I+ +L+V+ +V+++ A RKI I Y R S+
Sbjct: 197 AQFFASGRSGAMSPAVIVGVMLMVVVTIAFVVFMERALRKIHIQYPRRQVGMKVYDGGSS 256
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTG---IAALKKAAVALNPGGSFYLPTNILL 379
+LP KVN +GV+P IF++S L LP T++ F+G + PG YL L+
Sbjct: 257 HLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNQTSPVMSTILAYFGPGQPLYLIFFALM 316
Query: 380 IAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
I FF Y+YT+ + DDV++ LK Q +P +RPGK TA +L+ V++RI VLGS +LA
Sbjct: 317 IVFFAYFYTYNVAFKTDDVADNLKNQNGFVPGIRPGKKTAEYLEYVVTRILVLGSAYLAA 376
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 377 VCLLPEILRSQLAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 425
>gi|134302566|ref|YP_001122536.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421752450|ref|ZP_16189475.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis AS_713]
gi|421754316|ref|ZP_16191291.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 831]
gi|421758047|ref|ZP_16194907.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 80700103]
gi|421759878|ref|ZP_16196702.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 70102010]
gi|424675200|ref|ZP_18112109.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 70001275]
gi|134050343|gb|ABO47414.1| preprotein transporter, SecY subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409084840|gb|EKM85001.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 831]
gi|409085034|gb|EKM85187.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis AS_713]
gi|409089795|gb|EKM89827.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 70102010]
gi|409090617|gb|EKM90630.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 80700103]
gi|417434149|gb|EKT89117.1| preprotein translocase subunit SecY [Francisella tularensis subsp.
tularensis 70001275]
Length = 441
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 255/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSAGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L L+P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|154248695|ref|YP_001419653.1| preprotein translocase subunit SecY [Xanthobacter autotrophicus
Py2]
gi|154162780|gb|ABS69996.1| preprotein translocase, SecY subunit [Xanthobacter autotrophicus
Py2]
Length = 444
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 253/436 (58%), Gaps = 21/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNS 124
AA ++++FG K L + LG L + RLG YIP+ G+N +A Q
Sbjct: 4 AAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNAQQG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
++ + FSGG + R+ I +L I+P+I+A I+ QLL ++P L+ L K+EGEAGRK++ Q
Sbjct: 64 IIGLFNMFSGGAVERMAIFALNIMPYISASIIIQLLTSVSPTLEAL-KKEGEAGRKQLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+ QA G + L V D + +T+V LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRITTVITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-----IIISFILLVLGIVYV 296
+GNGTSL+IF I++ LP +F RT+ Q G ++T ++ ++++ IV++
Sbjct: 183 GIGNGTSLIIFGGIVAELPGAFVRTL----QLGREGAISTPLILAALVLAVVVIAFIVFM 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---T 353
+ A+R++ I Y R +S++LP K+N+SGV+P IF++S L +P T+A F +
Sbjct: 239 ERAQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGS 298
Query: 354 GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
G L+ + G Y+ +LLI FF ++YT + +P + ++ LK+ G IP +RP
Sbjct: 299 GPEWLQTITTHIGHGRPAYMVLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRP 358
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TA ++ VL+RI+V+G+ ++A + P ++ L + F GTS+LI+V DT
Sbjct: 359 GERTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFY--FGGTSLLIVVSVTMDT 416
Query: 474 ARKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 417 VSQIQGHLLAHQYEGL 432
>gi|240850815|ref|YP_002972215.1| preprotein translocase subunit SecY [Bartonella grahamii as4aup]
gi|240267938|gb|ACS51526.1| preprotein translocase subunit SecY [Bartonella grahamii as4aup]
Length = 448
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALESGIGTGLQIVLEPGLMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ +L++ IV++
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIVLIAVLVIGLIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + AL G Y+ L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISYALGHGQPLYMIVYAFLMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G+V++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAVYIILVCLLPEFMISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGYLVAHQYEGL 435
>gi|126666793|ref|ZP_01737770.1| protein translocase subunit SecY [Marinobacter sp. ELB17]
gi|126628838|gb|EAZ99458.1| protein translocase subunit SecY [Marinobacter sp. ELB17]
Length = 440
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 245/409 (59%), Gaps = 16/409 (3%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGI 147
FL LL Y R+G +IP+ G+N R A + +Q ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLALLVY----RIGAHIPVPGINPDRLAVLFEQNQGTILSMFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ ++P L+ L K+EGEAGR+K+ QYTRY +V A++Q G + L
Sbjct: 82 MPYISASIIMQLMTAVSPTLEQL-KKEGEAGRRKISQYTRYGTVILALLQGTGISVGLAS 140
Query: 208 YVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
F+ V +++ G+ F ++GE+I++ +GNG SLLIF I++ LP + G+
Sbjct: 141 QGVTFNDTLSFHFVAVVSFVSGAVFMMWLGEQITERGVGNGISLLIFAGIVAGLPGAIGQ 200
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
T+ +A + L I + V+G +V+++ +R++ INYA R Q+S++L
Sbjct: 201 TLEQARNGEMSLLLVLGIGVLAIAVIGFVVFMERGQRRLTINYAKRQQGGRVFAQQSSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILLI 380
P KVN +GV+P IF++S L P +L ++ G+ L + AL P Y+ +
Sbjct: 261 PLKVNMAGVIPPIFASSILLFPASLGQWFGQGEGMEWLSDISQALAPSQPLYIILFAAAV 320
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF ++YT L +P +V++ LKR GA IP +RPG+ TA ++ VL+R+++ G++++A ++
Sbjct: 321 VFFCFFYTALMYNPREVADNLKRSGAFIPGIRPGEQTAKYIDGVLTRLTLFGAMYIAAVS 380
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P + ++ + G GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 381 LFPQFLMVAGNVPFYLG--GTSLLIVVVVVMDFMAQVQSHLMSHQYESL 427
>gi|399991408|ref|YP_006571648.1| preprotein translocase SecY [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400755750|ref|YP_006564118.1| preprotein translocase SecY [Phaeobacter gallaeciensis 2.10]
gi|398654903|gb|AFO88873.1| preprotein translocase SecY [Phaeobacter gallaeciensis 2.10]
gi|398655963|gb|AFO89929.1| preprotein translocase SecY [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 454
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 241/421 (57%), Gaps = 27/421 (6%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREA---FVGNLDQNSLLSTLDSFSGGGIGRLGI 142
L + L LG L + RLG YIP+ G++ +A F+ + Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTYIPVPGIDADALRQFMTSAGQG-IGGMVSMFTGGALGRMGI 81
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTRY +V A QA G
Sbjct: 82 FALGIMPYISASIIVQLLTSMVPALEQL-KKEGEQGRKKINQYTRYGTVLLATAQAYGLA 140
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ L D +TD + L + L G+ F ++GE+I+ +GNG SL+IF II+
Sbjct: 141 VSLES--GDLATDPGMYFRLACMITLVGGTMFLMWLGEQITQRGIGNGISLIIFVGIIAE 198
Query: 259 LPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGI----VYVQEAERKIPINYASRYTS 313
+PA+ +A+ G ++ +II+ IL+++ I V+++ A RKI I Y R
Sbjct: 199 VPAA----IAQFLASGRSGAISPAVIIAVILMMIAIIMFVVFMERALRKIHIQYPRRQVG 254
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGG 369
S++LP KVN +GV+P IF++S L LP T++ F T + PG
Sbjct: 255 MKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSAGSTSGPIMSWLLANFGPGQ 314
Query: 370 SFYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + +I FF Y+YTF + PD+V+ LK Q +P +RPGK TA +L+ V++R+
Sbjct: 315 PLYLLFFVGMIVFFAYFYTFNVSFKPDEVANNLKNQNGFVPGIRPGKKTAEYLEYVVNRV 374
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
VLGS +LA + P ++ + + F GTSVLI+V DT ++ Q+ +++ +Y+
Sbjct: 375 LVLGSAYLAAVCLLPEILRGQLAIPVY--FGGTSVLIVVSVVMDTIQQAQSHLLAHQYEG 432
Query: 489 I 489
+
Sbjct: 433 L 433
>gi|119383532|ref|YP_914588.1| preprotein translocase subunit SecY [Paracoccus denitrificans
PD1222]
gi|119373299|gb|ABL68892.1| protein translocase subunit secY/sec61 alpha [Paracoccus
denitrificans PD1222]
Length = 457
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 233/409 (56%), Gaps = 20/409 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIP+ G++ A +DQ + L F+GG +GR+G+ +LGI+P+I
Sbjct: 31 LGLLIIYRLGTYIPVPGIDGAALRNFMDQAQAGIGGILSMFTGGALGRMGVFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QLLA + P L+ + K+EGE GRKK+ QYTRY +V A+ QA G + L
Sbjct: 91 SASIIVQLLASMVPALEQM-KKEGEQGRKKINQYTRYGTVALALFQAWGLAVSLEHGNLA 149
Query: 212 FSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
+ ++TL G+ F ++GE+I+ +GNG SL+IF I++ +P + +A+
Sbjct: 150 HEPGMFFRASVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPGHLAQFLAQ 209
Query: 270 AFQDGNYIGLATIIISFILLVLG-----IVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
G ++T +I +++++ +V+++ A RKI I Y R +S++L
Sbjct: 210 ----GRSGAVSTPVILGVMIMVAAVIAFVVFMERALRKIHIQYPRRQVGMKVYDGQSSHL 265
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSFYLPTNILLIA 381
P KVN +GV+P IF++S L LP T++ F+G + PG YL +I
Sbjct: 266 PIKVNPAGVIPAIFASSLLLLPVTISTFSGNQTGPIMSTVLAYFGPGQPLYLLFFAAMIV 325
Query: 382 FFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF Y+YT+ + +DV+E LK QG IP +RPGK T +L V++R+ V+GS +LA +
Sbjct: 326 FFTYFYTYNVSFKTEDVAENLKNQGGFIPGIRPGKRTEDYLTYVVTRVLVIGSAYLAFVC 385
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +I + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 386 LLPEIIRDQLAIPFY--FGGTSVLIVVSVVMDTINQVQSHLLAHQYEGL 432
>gi|386383945|ref|ZP_10069369.1| preprotein translocase subunit SecY [Streptomyces tsukubaensis
NRRL18488]
gi|385668610|gb|EIF91929.1| preprotein translocase subunit SecY [Streptomyces tsukubaensis
NRRL18488]
Length = 439
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 248/438 (56%), Gaps = 35/438 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDS 131
F FK P L K L LG + L RLG ++P+ GV+ +DQ NSL ++
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVLFRLGSHVPVPGVDYNKVQICVDQAAESNNSLFGLVNM 64
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 LSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTV 123
Query: 192 GFAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERIS 239
A++Q G V R V D S + V +T G+A ++GE I+
Sbjct: 124 ALAVLQGTGLVATARSGMLFQGCSVGTQIVPDRSIFTTIVMVVTMTAGTAAVMWLGELIT 183
Query: 240 DLKLGNGTSLLIFTSIIS-YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQE 298
D +GNG S+L+F SI + +L + + + DG +I T+I+ ++V +V+V++
Sbjct: 184 DRGIGNGMSILMFISIAAGFLGSLWAIKESGKLADG-WIEFGTVILIGFVMVALVVFVEQ 242
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAA 357
A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F +G ++
Sbjct: 243 AQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIAQFSSGTSS 302
Query: 358 LKKAAVALNPGGS--FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGK 415
K A G +Y+ T LLI FF ++Y + +P+DV++ +K+ G IP +R G+
Sbjct: 303 WKTWIEAHLVKGDHPYYIATYFLLIVFFAFFYVAISFNPEDVADNMKKYGGFIPGIRAGR 362
Query: 416 STAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGC 469
TA +L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG
Sbjct: 363 PTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILIIVGV 417
Query: 470 ATDTARKVQAEIISQKYK 487
+T +++++++ + Y+
Sbjct: 418 GLETVKQIESQLQQRNYE 435
>gi|71905981|ref|YP_283568.1| preprotein translocase subunit SecY [Dechloromonas aromatica RCB]
gi|71845602|gb|AAZ45098.1| protein translocase subunit secY/sec61 alpha [Dechloromonas
aromatica RCB]
Length = 440
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 244/417 (58%), Gaps = 15/417 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLG 141
G L + LLG L + R+G +IP+ G++ A N + +L + FSGG + R
Sbjct: 15 GDLKRRLWFLLGALVVYRIGAHIPVPGIDPNALADLFNSQKGGILGMFNMFSGGALSRFT 74
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QL++ +P+L+ L K+EGEAGR+K+ QYTRY +V A+ Q +G
Sbjct: 75 IFALGIMPYISASIIMQLMSVASPQLEAL-KKEGEAGRRKITQYTRYGTVILALFQGLGI 133
Query: 202 VLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ L VND + LT+V+ L G+ F ++GE+I++ LGNG S++IF I +
Sbjct: 134 AVALEAQAGLVNDPGFMFRLTTVSTLLTGTMFLMWLGEQITERGLGNGISIIIFAGIAAG 193
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSG 316
LP + G + E + G L +II +++ + +V+V+ +RKI +NYA R
Sbjct: 194 LPNAIGGLL-ELVRTGAMHPLTALIICILVVAVTGFVVFVERGQRKILVNYAKRQVGNKI 252
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
+S++LP K+N SGV+P IF++S + P T+A + G + LK A L+PG Y
Sbjct: 253 YGGQSSHLPLKLNMSGVIPPIFASSIILFPATVANWFGSSESMHWLKDVAGTLSPGQPIY 312
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT L + + ++ LK+ GA +P +RPG+ TA ++ +L R++++G
Sbjct: 313 VMLYASAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGEQTARYIDKILMRLTLIG 372
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ ++ P + ++ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 373 AAYITVVCLLPEFLILKWNVPFY--FGGTSLLIIVVVTMDFMSQVQAYVMSHQYESL 427
>gi|395779774|ref|ZP_10460243.1| preprotein translocase, SecY subunit [Bartonella washoensis
085-0475]
gi|395420149|gb|EJF86434.1| preprotein translocase, SecY subunit [Bartonella washoensis
085-0475]
Length = 448
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVARMAIFALGIMPYISASIIVQLLTSIIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++S+ L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALETGIGTGLQIVVEPGFMFRVSSIITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ LP++F + + A + D + L I + + ++ IV+V
Sbjct: 183 ITSRGIGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLIAIFLIAVSVIAIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ LL+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISYSLGHGQPLYMIVYALLMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISTLQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|345008590|ref|YP_004810944.1| preprotein translocase subunit SecY [Streptomyces violaceusniger Tu
4113]
gi|344034939|gb|AEM80664.1| preprotein translocase, SecY subunit [Streptomyces violaceusniger
Tu 4113]
Length = 437
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 239/430 (55%), Gaps = 21/430 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD----QNSLLSTLDSF 132
F FK P L K L L + L RLG +IP+ G+N + +D Q L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLAIIVLFRLGQHIPIPGINYKNVQTCMDLAKGQQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG+ K+ QYTRY ++
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGQSKITQYTRYLTIA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D S V +T G+A ++GE ++D
Sbjct: 124 LAILQGTGLVATARSGSLFQSCPVGGQIVRDDSIFTTAVMVITMTAGTALIMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + G ++ +I+ + +V +V+V++A+
Sbjct: 184 RGIGNGMSILMFVSIAAGFPSAMWSIKQQGKIMGGWLEFGLVILCGLAMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPMKVNQAGVIPVIFASSLLYIPALIVQFSNSKAGWA 303
Query: 361 AAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
++ N Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWISQNFVKGDHPIYIATYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A +L VL+RI+ G+++L ++A P V T + F GTS+LI+VG +T +++
Sbjct: 364 AEYLSYVLNRITWPGALYLGLIALVPTVALVTLNANQNFPFGGTSILIIVGVGLETVKQI 423
Query: 478 QAEIISQKYK 487
++++ + Y+
Sbjct: 424 ESQLQQRHYE 433
>gi|256827394|ref|YP_003151353.1| preprotein translocase, SecY subunit [Cryptobacterium curtum DSM
15641]
gi|256583537|gb|ACU94671.1| preprotein translocase, SecY subunit [Cryptobacterium curtum DSM
15641]
Length = 427
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 248/418 (59%), Gaps = 17/418 (4%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIG 138
FK P L K L L LAL RLG +IP+ G+ +F +Q + ++ +D FSGG +
Sbjct: 9 FKVPELRNKILFTLAILALYRLGSFIPVPGIPFASFAQAYEQAGGAAMTMIDVFSGGALS 68
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+ +LGI+P+I A I+ QL+ + P + K EGE GRKK+ Q TR+ ++ ++ A
Sbjct: 69 HFSVFALGIMPYITASIIMQLMQGVVPAVGRWAK-EGEPGRKKITQTTRWLTLALGLLNA 127
Query: 199 IGQVLYLRP--YVNDFS--TDWVLTSVTL---LTLGSAFTTYIGERISDLKLGNGTSLLI 251
+G +L + Y FS + LTS+ + L G+AF ++GE I+ +GNG SL+I
Sbjct: 128 VGYLLLFQSARYGVVFSDQVPYALTSILIVFTLVAGTAFIMWMGELITQRGIGNGMSLII 187
Query: 252 FTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL---GIVYVQEAERKIPINYA 308
FTSI+S +P++ + QD +GLA ++ +++ + I++++ A+R+IP++YA
Sbjct: 188 FTSIVSRVPSAIFSSGTS--QDDAGMGLAITLLILVVVAICIPAIIFMERAQRRIPVSYA 245
Query: 309 SRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPG 368
R R +S Y+P KVN++GV+PIIF++ + P +A + L+ A A++ G
Sbjct: 246 KRVQGRKMMGGQSTYIPLKVNAAGVIPIIFASCLIYFPAQIAALFNVDWLEVFANAISSG 305
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ T L+I FF Y+YT + +P+++S+ L++QG IP +RPG +T ++K V+ +
Sbjct: 306 WLNWIMTFGLII-FFAYFYTSMVFNPEELSDNLRKQGGFIPGIRPGSATVTYIKNVIRHV 364
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
++ G++F+ +A P+++ T+ + F GTS+LI++G A DT K+++++ Y
Sbjct: 365 TLPGAMFIGAVAVVPSILFVFTNNQLIQTFGGTSILIMIGVALDTMSKIESQLKMYNY 422
>gi|383937185|ref|ZP_09990592.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
gi|383701728|dbj|GAB60683.1| preprotein translocase subunit SecY [Rheinheimera nanhaiensis
E407-8]
Length = 442
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 245/417 (58%), Gaps = 16/417 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +L + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKARLLFVLLAIIVFRLGSFVPIPGIDAAVLAQLFEQQKGTIVEMFNMFSGGALERASVF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P + +L K+EGEAG++K+ Q TRY ++ A +QAIG
Sbjct: 78 ALGIMPYISASIIVQLLTVVHPAMAEL-KKEGEAGKRKINQMTRYGTLALATLQAIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L + + + T+V L G+ F ++GE+I++ +GNG SLLIFT I++
Sbjct: 137 GLPNMMQGLVINPGFAFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLLIFTGIVAGF 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T+ +A Q D +++ L I + + + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGQTIEQARQGDLHFLLLVAIGVIVVAITWFVVFFERGQRRIVVNYAKRQQGRQVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAA--LKKAAVALNPGGSFY 372
+S++LP KVN +GV+P IF++S + PGT+A + G+ A L++ A+ L+PG Y
Sbjct: 257 AQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGSGEGVVANFLQELALTLSPGQPLY 316
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++YT L +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G
Sbjct: 317 MMLYSAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLAG 376
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P + + + F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 377 ALYITFICLVPEFMMVAWDVQFY--FGGTSLLIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|392373643|ref|YP_003205476.1| preprotein translocase subunit SecY [Candidatus Methylomirabilis
oxyfera]
gi|258591336|emb|CBE67635.1| Preprotein translocase secY subunit [Candidatus Methylomirabilis
oxyfera]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 247/423 (58%), Gaps = 19/423 (4%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGG 135
G+ F+ P L + + + L RLG +IP G++ A Q +LL D FSGG
Sbjct: 6 GNIFRVPELKKRIIFTVLALIAYRLGSHIPTPGIDAHALSAFFQQAGGTLLGFFDLFSGG 65
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ RL I +LGI+P+I+A I+ QLLA + P L+ L K EGEAGRKK+ QYTRY +V A
Sbjct: 66 ALRRLSIFALGIMPYISASIILQLLAVVFPPLEKLSK-EGEAGRKKISQYTRYGTVLLAA 124
Query: 196 VQAIGQVLYLRPY---------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+QA+G + L +N V+T++TL T G+ F ++GE+I++ +GNG
Sbjct: 125 IQAMGIAIGLESMRSPLDEQIVINPGIGFRVMTTITLTT-GAIFLMWLGEQITERGIGNG 183
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIP 304
SLLIF II +P + T G N + L ++I +L+V G++ + +R I
Sbjct: 184 ISLLIFAGIIVRMPEAIVNT-WRLLTTGELNALSLLIVLILMVLVVAGVIIMTLGQRPIV 242
Query: 305 INYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA 364
+ YA R R +S ++P ++N++GV+P+IF+ S + P T+A+F ++ A A
Sbjct: 243 VQYAKRVVGRRIYGGQSTHIPLRINTAGVIPVIFAASIIVFPATIAQFFNHPWMQALARA 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
L+P Y + I FF Y+YT + +P DV++ +++ G IP +RPG TA F++ V
Sbjct: 303 LSPATVTYTVLYAIAIIFFTYFYTAIVFNPIDVADNMRKYGGFIPGIRPGAKTAEFIEKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L RI+++G+++L +++ P ++ T ++ F F GTS+LI+VG A DT ++V++ ++ +
Sbjct: 363 LDRITLVGAIYLTLISILPELLITTMNVPFF--FGGTSLLIVVGVALDTVQQVESHLVMR 420
Query: 485 KYK 487
Y+
Sbjct: 421 HYE 423
>gi|381165721|ref|ZP_09874948.1| Preprotein translocase secY subunit [Phaeospirillum molischianum
DSM 120]
gi|380685211|emb|CCG39760.1| Preprotein translocase secY subunit [Phaeospirillum molischianum
DSM 120]
Length = 447
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 245/438 (55%), Gaps = 20/438 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++FG F K L + L L + RLG +IPL GV+ QN
Sbjct: 4 AAEQLASNLNFGVFAKATDLKKRIWFTLAALVVYRLGTWIPLPGVDPHVLGELFKQNGGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L D +GG + R+ I +L I+P+I A I+ QL+ + P L+ K+EGE+GRKK+ Q
Sbjct: 64 ILGMFDMLAGGALHRMTIFALNIMPYITASIIIQLMTSVIPSLEA-TKKEGESGRKKINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVN--------DFSTDWVLTSVTLLTLGSAFTTYIGE 236
YTRY ++ A VQA G L L D + ++V L G+ F ++GE
Sbjct: 123 YTRYLTLAIATVQAYGMALGLESMSGPAGSAVYMDSHLVFRFSAVCTLVGGTLFLMWLGE 182
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATI--IISFILLVLGIV 294
+I+ +G GTSL+I I++ LPA+ G T+ E + G L I ++ IL++ IV
Sbjct: 183 QITARGIGQGTSLIIMAGIVAELPAAIGSTL-ELGRTGALPVLVIIGILLMSILVIAFIV 241
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT- 353
+++ A+R+I + Y R S++LP KVN+SGV+P IF++S L +P T+A+ +
Sbjct: 242 FLERAQRRIIVQYPKRQVGNKVFGGDSSHLPLKVNTSGVIPPIFASSVLLMPATVAQLSA 301
Query: 354 --GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
G L A + G Y+ + LI FF ++YT + +P + ++ LK+ G IP +
Sbjct: 302 QGGPEWLTSVAALMGHGQPLYVGMYVALIMFFAFFYTSVVFNPTETADNLKKYGGFIPGI 361
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPGK+TA +L VL+R++V+G+++LA L+ P V+ L + F GTS+LI+V
Sbjct: 362 RPGKNTADYLDYVLTRLTVVGAIYLAALSVLPEVLISKFSLPFY--FGGTSLLIVVSVTM 419
Query: 472 DTARKVQAEIISQKYKNI 489
DT ++Q+ +++ +Y+ +
Sbjct: 420 DTVSQIQSHLLAHQYEGL 437
>gi|337269061|ref|YP_004613116.1| preprotein translocase subunit SecY [Mesorhizobium opportunistum
WSM2075]
gi|336029371|gb|AEH89022.1| preprotein translocase, SecY subunit [Mesorhizobium opportunistum
WSM2075]
Length = 446
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 244/433 (56%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + +G L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLEAL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+VQA G + L V+D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLALVQAYGISVGLENGNGIVSDPGMFFRISTVVTLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+IF+ I++ LP + T+ GL II ++V+ IV+ + A+
Sbjct: 183 GIGNGISLIIFSGIVAGLPHAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A F+ +
Sbjct: 243 RRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNMPA 302
Query: 361 AA----VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
A +L G Y+ +I FF ++YT + +P D ++QLK+ IP RPG+
Sbjct: 303 WASTILASLGHGQPLYMAFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G+++L ++ P + T + + G GTS+LI+V DT +
Sbjct: 363 TADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLG--GTSLLIVVSVTLDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+Q +I+ +Y+ +
Sbjct: 421 IQGHLIAHQYEGL 433
>gi|147673663|ref|YP_001218070.1| preprotein translocase subunit SecY [Vibrio cholerae O395]
gi|227119015|ref|YP_002820911.1| preprotein translocase, SecY subunit [Vibrio cholerae O395]
gi|146315546|gb|ABQ20085.1| preprotein translocase, SecY subunit [Vibrio cholerae O395]
gi|227014465|gb|ACP10675.1| preprotein translocase, SecY subunit [Vibrio cholerae O395]
Length = 444
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|15642571|ref|NP_232204.1| preprotein translocase subunit SecY [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121730154|ref|ZP_01682549.1| preprotein translocase, SecY subunit [Vibrio cholerae V52]
gi|153831163|ref|ZP_01983830.1| preprotein translocase, SecY subunit [Vibrio cholerae 623-39]
gi|227082693|ref|YP_002811244.1| preprotein translocase subunit SecY [Vibrio cholerae M66-2]
gi|229507372|ref|ZP_04396877.1| preprotein translocase SecY subunit [Vibrio cholerae BX 330286]
gi|229509704|ref|ZP_04399185.1| preprotein translocase SecY subunit [Vibrio cholerae B33]
gi|229513499|ref|ZP_04402963.1| preprotein translocase SecY subunit [Vibrio cholerae TMA 21]
gi|229516829|ref|ZP_04406275.1| preprotein translocase SecY subunit [Vibrio cholerae RC9]
gi|229524557|ref|ZP_04413962.1| preprotein translocase SecY subunit [Vibrio cholerae bv. albensis
VL426]
gi|229527494|ref|ZP_04416886.1| preprotein translocase SecY subunit [Vibrio cholerae 12129(1)]
gi|229606878|ref|YP_002877526.1| preprotein translocase subunit SecY [Vibrio cholerae MJ-1236]
gi|254851116|ref|ZP_05240466.1| preprotein translocase subunit SecY [Vibrio cholerae MO10]
gi|255744455|ref|ZP_05418407.1| preprotein translocase SecY subunit [Vibrio cholera CIRS 101]
gi|262401863|ref|ZP_06078428.1| preprotein translocase SecY subunit [Vibrio sp. RC586]
gi|297581418|ref|ZP_06943341.1| preprotein translocase subunit SecY [Vibrio cholerae RC385]
gi|298500600|ref|ZP_07010404.1| preprotein translocase, SecY subunit [Vibrio cholerae MAK 757]
gi|360036446|ref|YP_004938209.1| preprotein translocase subunit SecY [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742355|ref|YP_005334324.1| preprotein translocase subunit SecY [Vibrio cholerae IEC224]
gi|384425505|ref|YP_005634863.1| preprotein translocase subunit SecY [Vibrio cholerae LMA3984-4]
gi|417814586|ref|ZP_12461238.1| preprotein translocase subunit SecY [Vibrio cholerae HC-49A2]
gi|417818323|ref|ZP_12464950.1| preprotein translocase subunit SecY [Vibrio cholerae HCUF01]
gi|417821879|ref|ZP_12468492.1| preprotein translocase subunit SecY [Vibrio cholerae HE39]
gi|417825787|ref|ZP_12472374.1| preprotein translocase subunit SecY [Vibrio cholerae HE48]
gi|418335565|ref|ZP_12944473.1| preprotein translocase subunit SecY [Vibrio cholerae HC-06A1]
gi|418338980|ref|ZP_12947873.1| preprotein translocase subunit SecY [Vibrio cholerae HC-23A1]
gi|418347102|ref|ZP_12951854.1| preprotein translocase subunit SecY [Vibrio cholerae HC-28A1]
gi|418350858|ref|ZP_12955588.1| preprotein translocase subunit SecY [Vibrio cholerae HC-43A1]
gi|418356431|ref|ZP_12959149.1| preprotein translocase subunit SecY [Vibrio cholerae HC-61A1]
gi|419827510|ref|ZP_14351008.1| preprotein translocase, SecY subunit [Vibrio cholerae CP1033(6)]
gi|419831000|ref|ZP_14354484.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-1A2]
gi|419834686|ref|ZP_14358139.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-61A2]
gi|421318762|ref|ZP_15769329.1| preprotein translocase subunit SecY [Vibrio cholerae CP1032(5)]
gi|421322316|ref|ZP_15772867.1| preprotein translocase subunit SecY [Vibrio cholerae CP1038(11)]
gi|421329772|ref|ZP_15780281.1| preprotein translocase subunit SecY [Vibrio cholerae CP1042(15)]
gi|421333728|ref|ZP_15784204.1| preprotein translocase subunit SecY [Vibrio cholerae CP1046(19)]
gi|421337270|ref|ZP_15787730.1| preprotein translocase subunit SecY [Vibrio cholerae CP1048(21)]
gi|421340695|ref|ZP_15791126.1| preprotein translocase subunit SecY [Vibrio cholerae HC-20A2]
gi|421348503|ref|ZP_15798879.1| preprotein translocase subunit SecY [Vibrio cholerae HC-46A1]
gi|421352272|ref|ZP_15802636.1| preprotein translocase subunit SecY [Vibrio cholerae HE-25]
gi|422308504|ref|ZP_16395652.1| preprotein translocase, SecY subunit [Vibrio cholerae CP1035(8)]
gi|422897660|ref|ZP_16935096.1| preprotein translocase subunit SecY [Vibrio cholerae HC-40A1]
gi|422903863|ref|ZP_16938822.1| preprotein translocase subunit SecY [Vibrio cholerae HC-48A1]
gi|422907741|ref|ZP_16942533.1| preprotein translocase subunit SecY [Vibrio cholerae HC-70A1]
gi|422914581|ref|ZP_16949084.1| preprotein translocase subunit SecY [Vibrio cholerae HFU-02]
gi|422918403|ref|ZP_16952715.1| preprotein translocase subunit SecY [Vibrio cholerae HC-02A1]
gi|422923864|ref|ZP_16957001.1| preprotein translocase subunit SecY [Vibrio cholerae BJG-01]
gi|422926786|ref|ZP_16959796.1| preprotein translocase subunit SecY [Vibrio cholerae HC-38A1]
gi|423146107|ref|ZP_17133699.1| preprotein translocase subunit SecY [Vibrio cholerae HC-19A1]
gi|423150810|ref|ZP_17138096.1| preprotein translocase subunit SecY [Vibrio cholerae HC-21A1]
gi|423154619|ref|ZP_17141782.1| preprotein translocase subunit SecY [Vibrio cholerae HC-22A1]
gi|423157686|ref|ZP_17144777.1| preprotein translocase subunit SecY [Vibrio cholerae HC-32A1]
gi|423161256|ref|ZP_17148193.1| preprotein translocase subunit SecY [Vibrio cholerae HC-33A2]
gi|423166091|ref|ZP_17152805.1| preprotein translocase subunit SecY [Vibrio cholerae HC-48B2]
gi|423732118|ref|ZP_17705418.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-17A1]
gi|423772685|ref|ZP_17713680.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-50A2]
gi|423823299|ref|ZP_17717306.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-55C2]
gi|423857259|ref|ZP_17721107.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-59A1]
gi|423884836|ref|ZP_17724700.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-60A1]
gi|423897166|ref|ZP_17727725.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-62A1]
gi|423932384|ref|ZP_17732119.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-77A1]
gi|423958697|ref|ZP_17735598.1| preprotein translocase, SecY subunit [Vibrio cholerae HE-40]
gi|423985842|ref|ZP_17739154.1| preprotein translocase, SecY subunit [Vibrio cholerae HE-46]
gi|423998821|ref|ZP_17742070.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-02C1]
gi|424003533|ref|ZP_17746606.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-17A2]
gi|424007327|ref|ZP_17750295.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-37A1]
gi|424017724|ref|ZP_17757549.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-55B2]
gi|424020811|ref|ZP_17760590.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-59B1]
gi|424025307|ref|ZP_17764955.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-62B1]
gi|424028193|ref|ZP_17767793.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-69A1]
gi|424587473|ref|ZP_18027050.1| preprotein translocase subunit SecY [Vibrio cholerae CP1030(3)]
gi|424592268|ref|ZP_18031690.1| preprotein translocase subunit SecY [Vibrio cholerae CP1037(10)]
gi|424600037|ref|ZP_18039214.1| preprotein translocase subunit SecY [Vibrio Cholerae CP1044(17)]
gi|424602796|ref|ZP_18041934.1| preprotein translocase subunit SecY [Vibrio cholerae CP1047(20)]
gi|424607733|ref|ZP_18046672.1| preprotein translocase subunit SecY [Vibrio cholerae CP1050(23)]
gi|424611549|ref|ZP_18050386.1| preprotein translocase subunit SecY [Vibrio cholerae HC-39A1]
gi|424614377|ref|ZP_18053160.1| preprotein translocase subunit SecY [Vibrio cholerae HC-41A1]
gi|424618345|ref|ZP_18057014.1| preprotein translocase subunit SecY [Vibrio cholerae HC-42A1]
gi|424623130|ref|ZP_18061632.1| preprotein translocase subunit SecY [Vibrio cholerae HC-47A1]
gi|424626024|ref|ZP_18064482.1| preprotein translocase subunit SecY [Vibrio cholerae HC-50A1]
gi|424630506|ref|ZP_18068787.1| preprotein translocase subunit SecY [Vibrio cholerae HC-51A1]
gi|424634553|ref|ZP_18072650.1| preprotein translocase subunit SecY [Vibrio cholerae HC-52A1]
gi|424637632|ref|ZP_18075637.1| preprotein translocase subunit SecY [Vibrio cholerae HC-55A1]
gi|424641535|ref|ZP_18079414.1| preprotein translocase subunit SecY [Vibrio cholerae HC-56A1]
gi|424646091|ref|ZP_18083824.1| preprotein translocase subunit SecY [Vibrio cholerae HC-56A2]
gi|424649607|ref|ZP_18087266.1| preprotein translocase subunit SecY [Vibrio cholerae HC-57A1]
gi|424653858|ref|ZP_18091236.1| preprotein translocase subunit SecY [Vibrio cholerae HC-57A2]
gi|424657675|ref|ZP_18094958.1| preprotein translocase subunit SecY [Vibrio cholerae HC-81A2]
gi|429885955|ref|ZP_19367522.1| Preprotein translocase secY subunit [Vibrio cholerae PS15]
gi|440710793|ref|ZP_20891440.1| preprotein translocase SecY subunit [Vibrio cholerae 4260B]
gi|443504906|ref|ZP_21071857.1| preprotein translocase subunit SecY [Vibrio cholerae HC-64A1]
gi|443508813|ref|ZP_21075567.1| preprotein translocase subunit SecY [Vibrio cholerae HC-65A1]
gi|443512651|ref|ZP_21079283.1| preprotein translocase subunit SecY [Vibrio cholerae HC-67A1]
gi|443516210|ref|ZP_21082714.1| preprotein translocase subunit SecY [Vibrio cholerae HC-68A1]
gi|443520003|ref|ZP_21086389.1| preprotein translocase subunit SecY [Vibrio cholerae HC-71A1]
gi|443524896|ref|ZP_21091097.1| preprotein translocase subunit SecY [Vibrio cholerae HC-72A2]
gi|443528697|ref|ZP_21094729.1| preprotein translocase subunit SecY [Vibrio cholerae HC-78A1]
gi|443532476|ref|ZP_21098489.1| preprotein translocase subunit SecY [Vibrio cholerae HC-7A1]
gi|443536292|ref|ZP_21102157.1| preprotein translocase subunit SecY [Vibrio cholerae HC-80A1]
gi|443539823|ref|ZP_21105675.1| preprotein translocase subunit SecY [Vibrio cholerae HC-81A1]
gi|449054994|ref|ZP_21733662.1| Preprotein translocase subunit SecY [Vibrio cholerae O1 str. Inaba
G4222]
gi|12644346|sp|P78283.2|SECY_VIBCH RecName: Full=Protein translocase subunit SecY
gi|9657163|gb|AAF95717.1| preprotein translocase, SecY subunit [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121628096|gb|EAX60635.1| preprotein translocase, SecY subunit [Vibrio cholerae V52]
gi|148873350|gb|EDL71485.1| preprotein translocase, SecY subunit [Vibrio cholerae 623-39]
gi|227010581|gb|ACP06793.1| preprotein translocase, SecY subunit [Vibrio cholerae M66-2]
gi|229335126|gb|EEO00611.1| preprotein translocase SecY subunit [Vibrio cholerae 12129(1)]
gi|229338138|gb|EEO03155.1| preprotein translocase SecY subunit [Vibrio cholerae bv. albensis
VL426]
gi|229345892|gb|EEO10864.1| preprotein translocase SecY subunit [Vibrio cholerae RC9]
gi|229349376|gb|EEO14332.1| preprotein translocase SecY subunit [Vibrio cholerae TMA 21]
gi|229353178|gb|EEO18117.1| preprotein translocase SecY subunit [Vibrio cholerae B33]
gi|229354877|gb|EEO19798.1| preprotein translocase SecY subunit [Vibrio cholerae BX 330286]
gi|229369533|gb|ACQ59956.1| preprotein translocase SecY subunit [Vibrio cholerae MJ-1236]
gi|254846821|gb|EET25235.1| preprotein translocase subunit SecY [Vibrio cholerae MO10]
gi|255737980|gb|EET93373.1| preprotein translocase SecY subunit [Vibrio cholera CIRS 101]
gi|262351835|gb|EEZ00966.1| preprotein translocase SecY subunit [Vibrio sp. RC586]
gi|297534256|gb|EFH73094.1| preprotein translocase subunit SecY [Vibrio cholerae RC385]
gi|297540769|gb|EFH76826.1| preprotein translocase, SecY subunit [Vibrio cholerae MAK 757]
gi|327485058|gb|AEA79465.1| Preprotein translocase secY subunit [Vibrio cholerae LMA3984-4]
gi|340035144|gb|EGQ96125.1| preprotein translocase subunit SecY [Vibrio cholerae HCUF01]
gi|340035396|gb|EGQ96376.1| preprotein translocase subunit SecY [Vibrio cholerae HC-49A2]
gi|340035915|gb|EGQ96892.1| preprotein translocase subunit SecY [Vibrio cholerae HE39]
gi|340045645|gb|EGR06586.1| preprotein translocase subunit SecY [Vibrio cholerae HE48]
gi|341619198|gb|EGS45052.1| preprotein translocase subunit SecY [Vibrio cholerae HC-48A1]
gi|341619608|gb|EGS45411.1| preprotein translocase subunit SecY [Vibrio cholerae HC-70A1]
gi|341620068|gb|EGS45846.1| preprotein translocase subunit SecY [Vibrio cholerae HC-40A1]
gi|341635036|gb|EGS59764.1| preprotein translocase subunit SecY [Vibrio cholerae HC-02A1]
gi|341635876|gb|EGS60581.1| preprotein translocase subunit SecY [Vibrio cholerae HFU-02]
gi|341643256|gb|EGS67552.1| preprotein translocase subunit SecY [Vibrio cholerae BJG-01]
gi|341645271|gb|EGS69419.1| preprotein translocase subunit SecY [Vibrio cholerae HC-38A1]
gi|356416158|gb|EHH69794.1| preprotein translocase subunit SecY [Vibrio cholerae HC-06A1]
gi|356416744|gb|EHH70368.1| preprotein translocase subunit SecY [Vibrio cholerae HC-21A1]
gi|356421869|gb|EHH75357.1| preprotein translocase subunit SecY [Vibrio cholerae HC-19A1]
gi|356427364|gb|EHH80614.1| preprotein translocase subunit SecY [Vibrio cholerae HC-22A1]
gi|356429023|gb|EHH82242.1| preprotein translocase subunit SecY [Vibrio cholerae HC-28A1]
gi|356429273|gb|EHH82491.1| preprotein translocase subunit SecY [Vibrio cholerae HC-23A1]
gi|356438675|gb|EHH91679.1| preprotein translocase subunit SecY [Vibrio cholerae HC-32A1]
gi|356443334|gb|EHH96156.1| preprotein translocase subunit SecY [Vibrio cholerae HC-33A2]
gi|356443750|gb|EHH96568.1| preprotein translocase subunit SecY [Vibrio cholerae HC-43A1]
gi|356448665|gb|EHI01427.1| preprotein translocase subunit SecY [Vibrio cholerae HC-48B2]
gi|356451645|gb|EHI04328.1| preprotein translocase subunit SecY [Vibrio cholerae HC-61A1]
gi|356647600|gb|AET27655.1| preprotein translocase subunit SecY [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795865|gb|AFC59336.1| preprotein translocase subunit SecY [Vibrio cholerae IEC224]
gi|395915675|gb|EJH26509.1| preprotein translocase subunit SecY [Vibrio cholerae CP1032(5)]
gi|395916865|gb|EJH27694.1| preprotein translocase subunit SecY [Vibrio cholerae CP1038(11)]
gi|395926753|gb|EJH37522.1| preprotein translocase subunit SecY [Vibrio cholerae CP1042(15)]
gi|395927090|gb|EJH37854.1| preprotein translocase subunit SecY [Vibrio cholerae CP1046(19)]
gi|395930298|gb|EJH41046.1| preprotein translocase subunit SecY [Vibrio cholerae CP1048(21)]
gi|395938682|gb|EJH49369.1| preprotein translocase subunit SecY [Vibrio cholerae HC-20A2]
gi|395940867|gb|EJH51547.1| preprotein translocase subunit SecY [Vibrio cholerae HC-46A1]
gi|395949672|gb|EJH60292.1| preprotein translocase subunit SecY [Vibrio cholerae HE-25]
gi|395957570|gb|EJH68108.1| preprotein translocase subunit SecY [Vibrio cholerae HC-56A2]
gi|395957882|gb|EJH68394.1| preprotein translocase subunit SecY [Vibrio cholerae HC-57A2]
gi|395960443|gb|EJH70811.1| preprotein translocase subunit SecY [Vibrio cholerae HC-42A1]
gi|395969945|gb|EJH79764.1| preprotein translocase subunit SecY [Vibrio cholerae HC-47A1]
gi|395971722|gb|EJH81354.1| preprotein translocase subunit SecY [Vibrio cholerae CP1030(3)]
gi|395974109|gb|EJH83645.1| preprotein translocase subunit SecY [Vibrio cholerae CP1047(20)]
gi|408005986|gb|EKG44166.1| preprotein translocase subunit SecY [Vibrio cholerae HC-39A1]
gi|408010416|gb|EKG48275.1| preprotein translocase subunit SecY [Vibrio cholerae HC-41A1]
gi|408010777|gb|EKG48624.1| preprotein translocase subunit SecY [Vibrio cholerae HC-50A1]
gi|408016919|gb|EKG54444.1| preprotein translocase subunit SecY [Vibrio cholerae HC-52A1]
gi|408021888|gb|EKG59122.1| preprotein translocase subunit SecY [Vibrio cholerae HC-56A1]
gi|408022314|gb|EKG59531.1| preprotein translocase subunit SecY [Vibrio cholerae HC-55A1]
gi|408029597|gb|EKG66310.1| preprotein translocase subunit SecY [Vibrio cholerae CP1037(10)]
gi|408031118|gb|EKG67757.1| preprotein translocase subunit SecY [Vibrio cholerae HC-57A1]
gi|408040326|gb|EKG76512.1| preprotein translocase subunit SecY [Vibrio Cholerae CP1044(17)]
gi|408041703|gb|EKG77802.1| preprotein translocase subunit SecY [Vibrio cholerae CP1050(23)]
gi|408051643|gb|EKG86724.1| preprotein translocase subunit SecY [Vibrio cholerae HC-81A2]
gi|408053007|gb|EKG88029.1| preprotein translocase subunit SecY [Vibrio cholerae HC-51A1]
gi|408606930|gb|EKK80343.1| preprotein translocase, SecY subunit [Vibrio cholerae CP1033(6)]
gi|408617447|gb|EKK90567.1| preprotein translocase, SecY subunit [Vibrio cholerae CP1035(8)]
gi|408619501|gb|EKK92530.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-1A2]
gi|408622060|gb|EKK95049.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-17A1]
gi|408632652|gb|EKL05092.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-50A2]
gi|408634217|gb|EKL06485.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-55C2]
gi|408639485|gb|EKL11295.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-59A1]
gi|408639878|gb|EKL11683.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-60A1]
gi|408648475|gb|EKL19815.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-61A2]
gi|408653213|gb|EKL24386.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-77A1]
gi|408653819|gb|EKL24968.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-62A1]
gi|408656095|gb|EKL27201.1| preprotein translocase, SecY subunit [Vibrio cholerae HE-40]
gi|408663362|gb|EKL34241.1| preprotein translocase, SecY subunit [Vibrio cholerae HE-46]
gi|408844068|gb|EKL84204.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-37A1]
gi|408844637|gb|EKL84761.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-17A2]
gi|408852053|gb|EKL91903.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-02C1]
gi|408858358|gb|EKL98034.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-55B2]
gi|408866156|gb|EKM05543.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-59B1]
gi|408869456|gb|EKM08755.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-62B1]
gi|408878047|gb|EKM17061.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-69A1]
gi|429227101|gb|EKY33156.1| Preprotein translocase secY subunit [Vibrio cholerae PS15]
gi|439973526|gb|ELP49739.1| preprotein translocase SecY subunit [Vibrio cholerae 4260B]
gi|443430629|gb|ELS73188.1| preprotein translocase subunit SecY [Vibrio cholerae HC-64A1]
gi|443434462|gb|ELS80615.1| preprotein translocase subunit SecY [Vibrio cholerae HC-65A1]
gi|443438293|gb|ELS88014.1| preprotein translocase subunit SecY [Vibrio cholerae HC-67A1]
gi|443442417|gb|ELS95726.1| preprotein translocase subunit SecY [Vibrio cholerae HC-68A1]
gi|443446247|gb|ELT02913.1| preprotein translocase subunit SecY [Vibrio cholerae HC-71A1]
gi|443448928|gb|ELT09231.1| preprotein translocase subunit SecY [Vibrio cholerae HC-72A2]
gi|443452920|gb|ELT16755.1| preprotein translocase subunit SecY [Vibrio cholerae HC-78A1]
gi|443456650|gb|ELT24048.1| preprotein translocase subunit SecY [Vibrio cholerae HC-7A1]
gi|443460434|gb|ELT31520.1| preprotein translocase subunit SecY [Vibrio cholerae HC-80A1]
gi|443464507|gb|ELT39169.1| preprotein translocase subunit SecY [Vibrio cholerae HC-81A1]
gi|448265612|gb|EMB02846.1| Preprotein translocase subunit SecY [Vibrio cholerae O1 str. Inaba
G4222]
Length = 444
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|427407019|ref|ZP_18897224.1| preprotein translocase, SecY subunit [Selenomonas sp. F0473]
gi|425707494|gb|EKU70538.1| preprotein translocase, SecY subunit [Selenomonas sp. F0473]
Length = 418
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 236/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L ++ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFRIPELRQKIIFTLIMFSVFRMGTHIPVPGVDPGAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G+KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGQKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKSAILNPNPVNILIIAITLTAGTVFLMWLGEQITAHGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R
Sbjct: 185 ALPKNIG-TIYAYLKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPITYAKRVVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
S+++PFKVN +GV+PIIF++S L P T+A+F I +K A L G
Sbjct: 244 MATGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDIPWVKTVASYLEWGRPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+L+I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVLMIIFFTYFYTSVTVKIQDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ T++ F GT++LI+VG A T +++++ I+ + Y+
Sbjct: 364 LAFIAVLPNMVAGATNIQGVY-FGGTALLIVVGVALQTMKQIESMIVMRNYE 414
>gi|407893942|ref|ZP_11152972.1| preprotein translocase subunit SecY [Diplorickettsia massiliensis
20B]
Length = 448
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 258/440 (58%), Gaps = 22/440 (5%)
Query: 61 SSSARGVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVN--REAFVG 118
+S R + A+M G F+ L + L +L + + R+G ++P+ G++ R A +
Sbjct: 3 KASRRPLTASMPPKKAQNGGMFE--LKRRLLFVLLAILVYRIGAHVPVPGLDPTRLAELF 60
Query: 119 NLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAG 178
+ N +L + FSGG + R + +LG++P+I+ I+ QLL + P L+ L K+EGEAG
Sbjct: 61 SHQSNGILGLFNMFSGGALSRFTVFALGLLPYISVSIIVQLLTSVVPTLEQL-KKEGEAG 119
Query: 179 RKKVLQYTRYASVGFAIVQAIGQVLYLRPY---VNDFSTDWVLTSVTLLTLGSAFTTYIG 235
R+K+ QYTRY +V A VQ++G +L + +N + + +VTL+T G+ F ++G
Sbjct: 120 RRKINQYTRYGTVLLATVQSVGMAKWLVSHQVVLNPGLFFYFVATVTLVT-GTVFLMWLG 178
Query: 236 ERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN--YIGLATIIISFILLVLGI 293
E+I++ +GNG SL+IF+ I+S + S E + G ++ L I+ +L+ +
Sbjct: 179 EQITERGIGNGISLIIFSGIVSAIAKSL-----EQLRQGQIQFLTLICILAVTLLVTAFV 233
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF- 352
V+++ +R+I +NY R R + ++LP K+N +GV+P IF++S + LP T A++
Sbjct: 234 VFMERGQRRITVNYPQRQQGRKVFSAQMSHLPLKINMAGVIPPIFASSIMMLPATFAQWF 293
Query: 353 ---TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
G+ L K + L+PG Y+ I FF+++YT L +P + ++ LK+ GA IP
Sbjct: 294 SNVKGMGWLSKVSFWLSPGQLPYILLFTAAIVFFSFFYTALVFNPRETADNLKKSGAFIP 353
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPG+ +A ++ ++R++++G ++LA++A P + H+ + F GTS+LI+V
Sbjct: 354 GIRPGEQSARYIDATMTRLTLVGCIYLALVALLPEFMIMAWHVPFY--FGGTSLLIIVVV 411
Query: 470 ATDTARKVQAEIISQKYKNI 489
D +VQ+ ++SQ+Y+++
Sbjct: 412 IMDFMVQVQSLLMSQQYESL 431
>gi|379012672|ref|YP_005270484.1| preprotein translocase secY subunit SecY [Acetobacterium woodii DSM
1030]
gi|375303461|gb|AFA49595.1| preprotein translocase secY subunit SecY [Acetobacterium woodii DSM
1030]
Length = 419
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 244/417 (58%), Gaps = 18/417 (4%)
Query: 80 DFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
D +K P L K L L L + RLG +IP+ ++ ++QN + + SGG G
Sbjct: 7 DAWKIPDLRRKILITLALLFVYRLGSFIPVPFIDTAQLSQLVNQNGMFGLFNIISGGNFG 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
+ I ++ I P+INA I+ LLA P L+ LQK EGE GRKK+ QYTR+ ++ A++QA
Sbjct: 67 KFTIFAMSITPYINASIIMNLLAFAIPSLEALQK-EGEEGRKKLAQYTRFLTILLALIQA 125
Query: 199 IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+G L + + +T V T V +T G+AF Y+GE+I++ +GNG SL+IF SI+S
Sbjct: 126 LGMSLSFGDLLTEKTTFTVFTVVLCITAGTAFLMYLGEQITENGIGNGISLIIFISIVSR 185
Query: 259 LPASFGRTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
+P+S + + +Q N I L I+ ++++ G+V VQE +R+IP+ YA R
Sbjct: 186 IPSS----IVQMYQYVSIGTLNIISLIVFIVFIVVVIFGVVAVQEGQRRIPVQYAKRVVG 241
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYL 373
R +S ++P +VN +GV+P+IF++S P T++ F +A GS+
Sbjct: 242 RKMYGGQSTHIPMRVNMAGVIPVIFASSLTLFPATISSFFPTSAFANFISTYLAWGSWL- 300
Query: 374 PTNIL---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
TNI+ LI F Y+YT + +P D+++ +K+QG +P +RPGK T +L +++R+++
Sbjct: 301 -TNIIYVVLIIAFTYFYTAVTFNPYDIADNIKKQGGYVPGIRPGKPTVEYLSRIMNRLTL 359
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G VFLAI+A P + + F GTS+LI++G A +T +++++E++ + ++
Sbjct: 360 FGGVFLAIIAVIPIFVGNFMGVNL--QFGGTSLLIVIGVALETVKQIESEMMMRHHQ 414
>gi|348028115|ref|YP_004870801.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
gi|347945458|gb|AEP28808.1| preprotein translocase subunit SecY [Glaciecola nitratireducens
FR1064]
Length = 436
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 244/416 (58%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG Y+P+ G++ +Q +++ ++ FSGG + R +
Sbjct: 17 LKSRLLFVLGAIIVFRLGSYVPIPGIDGNVLAQLFEQQKGTIVEMMNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL+ + P L +L K+EGEAG++K+ QYTRY ++ AI Q++G
Sbjct: 77 ALGIMPYITASIIVQLLSHMYPPLMEL-KKEGEAGKRKISQYTRYLTLLLAIFQSVGIAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T++ L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLVQGLVVNPGIGFYFTAIVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P + G+T AE + G L ++I I++ L +V+V+ A+R+I +NYA R R
Sbjct: 196 PTAIGQT-AEQARLGEINLLFLLVIGAIIVALTYLVVFVERAQRRIVVNYAKRQQGRKVF 254
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S++LP KVN +GV+P IF++S + PGTLA G + L ++AL+PG Y+
Sbjct: 255 AAQSSHLPLKVNMAGVIPPIFASSIILFPGTLAGMVGQNETFSFLTDVSLALSPGQPLYV 314
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ ++ V++R+++ G+
Sbjct: 315 MLYAATIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTSRYIDKVMTRLTLAGA 374
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+ D +VQ ++S +Y ++
Sbjct: 375 LYITFVCLVPEFLLLWFNVPFY--FGGTSLLIICVVVMDFMAQVQTHLMSHQYGDV 428
>gi|319405878|emb|CBI79510.1| translocase SecY subunit precursor [Bartonella sp. AR 15-3]
Length = 448
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 245/435 (56%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++FG F + L + L L + R G YI L G+N + + ++
Sbjct: 4 AAEQLVSNMNFGAFSRATELKKRIWFTLAALLIYRFGTYISLPGINIDVLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIVPSLEAL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + +T+V L G+ F ++GE+
Sbjct: 123 YTRYMTVILAILQAFGIAVALETGIGTGLQIVIEPGIIFRITAVISLVGGTIFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ + ++ IV+V
Sbjct: 183 ITSRGIGNGVSLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIVVIAVFIIGVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++ P K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRIIIQYPKRQVGNQMFQGDMSHFPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + L G Y+ L+AFF ++YT + D +EQLKR IP +RPG
Sbjct: 303 PQWVQTISFFLGHGQPLYMIVYAALMAFFCFFYTAIVFSSSDTAEQLKRHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G+V++ ++ P I T H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAVYIILICLLPEFIISTLHIPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +YK +
Sbjct: 421 AQIQGSLVAHQYKGL 435
>gi|229521642|ref|ZP_04411060.1| preprotein translocase SecY subunit [Vibrio cholerae TM 11079-80]
gi|419838260|ref|ZP_14361697.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-46B1]
gi|421344814|ref|ZP_15795216.1| preprotein translocase subunit SecY [Vibrio cholerae HC-43B1]
gi|421356176|ref|ZP_15806506.1| preprotein translocase subunit SecY [Vibrio cholerae HE-45]
gi|423736220|ref|ZP_17709409.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-41B1]
gi|424010554|ref|ZP_17753486.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-44C1]
gi|229341236|gb|EEO06240.1| preprotein translocase SecY subunit [Vibrio cholerae TM 11079-80]
gi|395938897|gb|EJH49583.1| preprotein translocase subunit SecY [Vibrio cholerae HC-43B1]
gi|395949290|gb|EJH59916.1| preprotein translocase subunit SecY [Vibrio cholerae HE-45]
gi|408628932|gb|EKL01649.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-41B1]
gi|408855642|gb|EKL95341.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-46B1]
gi|408862947|gb|EKM02446.1| preprotein translocase, SecY subunit [Vibrio cholerae HC-44C1]
Length = 444
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVINQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|226356877|ref|YP_002786617.1| preprotein translocase subunit SecY [Deinococcus deserti VCD115]
gi|226318867|gb|ACO46863.1| putative Preprotein translocase secY subunit [Deinococcus deserti
VCD115]
Length = 439
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 235/424 (55%), Gaps = 19/424 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F D F+ P L K + L LA+ RLG IP GVN A + + L + SGG
Sbjct: 5 FRDAFRIPDLRRKIVFTLLLLAVYRLGSAIPTPGVNSAA-LSQANSGGLFGLISMISGGN 63
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + I +LG++P+I A IV QL+ P L+ L K EGE GRKK+ Q+TRYA+VG +
Sbjct: 64 LSQFSIFALGVLPYITASIVIQLMTTTIPALEKLSK-EGEEGRKKINQFTRYAAVGLGTL 122
Query: 197 QAIGQVLYLRPYVNDFSTDW------VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
QA+ LY+ + + W +L V G AFT +IGERI+++ +GNG SL+
Sbjct: 123 QALFFSLYINSNPSFIAVGWEPGLFTILVMVLTQVAGIAFTMWIGERITEVGVGNGISLI 182
Query: 251 IFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYA 308
I II+ P T AE F+ + L I I + GIVYV +AER++P+ YA
Sbjct: 183 ITAGIIAVYPTEIANT-AELFRTDAVQLMPLLAFIAVIIATIAGIVYVYQAERRVPVTYA 241
Query: 309 SRYTSRSGGLQRS---AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA- 364
+G + + +LP KVN +GV+P+IF+++ L LP +A T A + A
Sbjct: 242 RARGGAAGQARGAGQATWLPIKVNQAGVIPVIFASAMLILPNLIASATATRAPEVNAWIQ 301
Query: 365 --LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
L G Y+ LI F Y Y +Q DP ++EQL+ G IP VRPG TA FL
Sbjct: 302 SNLVFGAPLYIALEAALIFGFTYLYNSVQFDPKRIAEQLREAGGFIPGVRPGVPTAEFLG 361
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 482
+ R+S+ G+VFL +L P V+++ T +T F+ F+GT +LI+VG A +T ++++A++
Sbjct: 362 GISGRLSLWGAVFLVVLTIFPQVVQRATGITTFQ-FSGTGLLIIVGVALETLKQLEAQLT 420
Query: 483 SQKY 486
++Y
Sbjct: 421 VRRY 424
>gi|27262236|gb|AAN87399.1| protein translocase subunit SecY [Heliobacillus mobilis]
Length = 422
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 238/391 (60%), Gaps = 8/391 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G +IP+ G+NR A ++ SL D SGG + + ++ I P+INA I+ QLL
Sbjct: 32 RIGAHIPVPGINRAAIEQLMNTGSLFGFFDVISGGSFRKFSVFAMSITPYINASIIMQLL 91
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST-DWVLT 219
+ P+L+ L K EGE GR+K+ +YTRY ++ A +QAIG L V++ S ++L
Sbjct: 92 TVVIPRLEQLAK-EGEDGRRKITEYTRYFTIVLAFIQAIGLSYGLTGAVSNPSIWSYLLI 150
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYI 277
++T LT G+AF +IGERI++ +GNG SL+IF I+S LP+ T+ E + G N +
Sbjct: 151 ALT-LTAGTAFLMWIGERITENGIGNGISLIIFAGIVSRLPSGI-MTMVEYVRVGTTNIL 208
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
A ++ + GI+Y+ E +R+IP+NYA R R ++ ++P +VN +GV+P+I
Sbjct: 209 NAALFVLIAAATIAGIIYINEGQRRIPVNYAKRQVGRRVYGGQNTHIPMRVNMAGVIPVI 268
Query: 338 FSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT-NILLIAFFNYYYTFLQLDPDD 396
F++S LA P T+A F + + + + GSF +LI FF Y+YT + +P +
Sbjct: 269 FASSILAFPTTIAAFFPGSPIGQWFQSYFAFGSFLHSVFYAVLILFFAYFYTAITFNPVE 328
Query: 397 VSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR 456
V++ LK+ G IP +RPGK TA + V+ RI+++G +FLA+++ P I + T ++
Sbjct: 329 VADNLKKYGGFIPGIRPGKPTADYFGKVMGRITLVGGLFLAVISLLPTFIIKFTGISNIY 388
Query: 457 GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A DT +++++ ++ + Y+
Sbjct: 389 -FGGTALLIVVGVALDTMKQMESNMLMRNYQ 418
>gi|262273359|ref|ZP_06051173.1| preprotein translocase SecY subunit [Grimontia hollisae CIP 101886]
gi|262222337|gb|EEY73648.1| preprotein translocase SecY subunit [Grimontia hollisae CIP 101886]
Length = 441
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 247/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
L + L ++G L + R G ++P+ G++ A + +L Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVVGALLVFRAGSFVPIPGID-AAVLADLFEQQQGTIIELFNMFSGGALERASI 77
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 78 LALGIMPYISASIIVQLLTVVHPALAEL-KKEGESGRRKISQYTRYGTLVLATFQAIGIA 136
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L + + + T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 137 TGLPSMIPGLVVNPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAG 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGG 317
LP++ G+T +A Q ++ L +I V+ +V+V+ +R+I +NYA R R
Sbjct: 197 LPSAIGQTAEQARQGELHVLLLLLIAVIAFAVIAFVVFVERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKLNMAGVIPAIFASSIILFPGTLAQWFGQSEQLGWLADVSLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 ILYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|440226357|ref|YP_007333448.1| preprotein translocase, SecY subunit [Rhizobium tropici CIAT 899]
gi|440037868|gb|AGB70902.1| preprotein translocase, SecY subunit [Rhizobium tropici CIAT 899]
Length = 446
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 247/436 (56%), Gaps = 20/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + LG L + RLG +IPL G+N A+ S
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLGALLVYRLGTHIPLPGLNPAAYAQAFQNQSGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L++L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFSGGAVQRMAIFALGIMPYISASIIVQLMTSVVPSLENL-KKEGEQGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRPYVNDFSTD--WVLTSVTLLTL--GSAFTTYIGERISD 240
YTRY +V +QA G + L + N D W T++TL G+ F ++GE+++
Sbjct: 123 YTRYGTVLLGALQAYGIAIGLE-HGNGVVVDPGWFFRISTVITLLGGTMFLMWLGEQVTS 181
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY---IGLATIIISFILLVLGIVYVQ 297
+GNG SL+IF I + LP + T+ E + G + LA +I++ +++ L IV+V+
Sbjct: 182 RGIGNGISLIIFAGIAAGLPTALAGTL-ELGRTGALSTPLILAVLIVAILVIAL-IVFVE 239
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
A+R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A A
Sbjct: 240 RAQRRLLIQYPKRQVGTRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATVAGLGNNTA 299
Query: 358 L----KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
L AL G Y+ LIAFF ++YT L +P D ++ LK+ G IP +RP
Sbjct: 300 LPTWVTSIVAALGHGQPVYMVLYGALIAFFAFFYTALVFNPKDTADNLKKHGGFIPGIRP 359
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TA ++ VL+RI+V+G+++L + P ++ T + G GTS+LI+V DT
Sbjct: 360 GERTAEYIDYVLTRITVIGAIYLVFVCILPEILVSQTGIPLSLG--GTSLLIVVSVTLDT 417
Query: 474 ARKVQAEIISQKYKNI 489
++Q +I+Q+Y+ +
Sbjct: 418 VAQIQGHLIAQQYEGL 433
>gi|414174057|ref|ZP_11428684.1| preprotein translocase, SecY subunit [Afipia broomeae ATCC 49717]
gi|410890691|gb|EKS38490.1| preprotein translocase, SecY subunit [Afipia broomeae ATCC 49717]
Length = 443
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 242/406 (59%), Gaps = 14/406 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFI 151
LG L + RLG YIPL G++ + V +L + F+GGGI R+ I +L I+P+I
Sbjct: 31 LGALLVYRLGTYIPLPGIDPNIWEQVFKSQAGGILGMFNMFAGGGIHRMAIFALNIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR---PY 208
+A I+ QLL ++P+L+ L K+EGE+GRK++ QYTRY +V A QA G + L
Sbjct: 91 SASIILQLLTTVSPQLEAL-KKEGESGRKQINQYTRYLTVILAAFQAYGIAVGLEGAGNV 149
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
V+D + +++V LT G+ F ++GE+I+ +GNG SL+I I++ LP++ T+
Sbjct: 150 VSDPGMFFRISTVITLTGGTMFLMWLGEQITSRGIGNGISLIILAGIVAELPSAIAGTLE 209
Query: 269 EAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
Q ++ LA II++ +++L IV+V+ A+R++ I Y R +S++LP
Sbjct: 210 LGRQGALSTFLILAIIIMAVAVIML-IVFVERAQRRLLIQYPKRQVGNKMFEGQSSHLPL 268
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFT---GIAALKKAAVALNPGGSFYLPTNILLIAFF 383
K+N++GV+P IF++S L LP T+A F G + L+ G +L + +I FF
Sbjct: 269 KLNTAGVIPPIFASSLLLLPTTIASFNAGKGPEWFQWLTTQLSHGRPLFLVLYLAMIVFF 328
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
++YT + +P + ++ LK+ G IP +RPG+ TA ++ VLSRI+V+G+++LA++ P
Sbjct: 329 AFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLSRITVIGAIYLAVVCLIP 388
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + + G GTS+LI+V DT +VQ +++ +Y+ +
Sbjct: 389 EILISYASVPFYLG--GTSLLIVVSVTMDTVAQVQGYLLAHQYEGL 432
>gi|260432468|ref|ZP_05786439.1| preprotein translocase, SecY subunit [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416296|gb|EEX09555.1| preprotein translocase, SecY subunit [Silicibacter lacuscaerulensis
ITI-1157]
Length = 454
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 243/416 (58%), Gaps = 17/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ +A ++Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDGQALREFMEQAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTR+ +V A VQA G +
Sbjct: 83 ALGIMPYISASIIVQLLTSMVPALEQL-KKEGEQGRKKINQYTRFGTVALATVQAYGLAV 141
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D +TD + L+++ L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLES--GDLATDPGLYFRLSTMITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 199
Query: 260 PASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
PA+ + +A + + +I+ I ++ +V+++ A RKI I Y R
Sbjct: 200 PAALAQFLASGRSGAISPAVIVGVIVMVIAVITFVVFMERALRKIHIQYPRRNVGMKVYE 259
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLP 374
S++LP KVN +GV+P IF++S L LP T++ F+ AA + PG YL
Sbjct: 260 GGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSSGAANGPIMSWLLANFGPGQPLYLL 319
Query: 375 TNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
+I FF Y+YTF + PDDV++ LK+Q +P +RPGK TA +L+ V++RI VLGS
Sbjct: 320 FFASMIVFFAYFYTFNVSFKPDDVADNLKKQNGFVPGIRPGKKTAEYLEYVVNRILVLGS 379
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 380 AYLAAVCLLPEILRGQFAIPFY--FGGTSVLIIVSVTMDTIQQVQSHLLAHQYEGL 433
>gi|111023116|ref|YP_706088.1| preprotein translocase subunit SecY [Rhodococcus jostii RHA1]
gi|226365615|ref|YP_002783398.1| preprotein translocase subunit SecY [Rhodococcus opacus B4]
gi|384106898|ref|ZP_10007802.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|397736536|ref|ZP_10503218.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|419961195|ref|ZP_14477204.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|424851604|ref|ZP_18276001.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|432336131|ref|ZP_19587661.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
gi|110822646|gb|ABG97930.1| preprotein translocase [Rhodococcus jostii RHA1]
gi|226244105|dbj|BAH54453.1| preprotein translocase SecY subunit [Rhodococcus opacus B4]
gi|356666269|gb|EHI46340.1| preprotein translocase, SecY subunit [Rhodococcus opacus PD630]
gi|383833349|gb|EID72812.1| preprotein translocase subunit SecY [Rhodococcus imtechensis
RKJ300]
gi|396927726|gb|EJI94953.1| preprotein translocase subunit secY [Rhodococcus sp. JVH1]
gi|414573516|gb|EKT84200.1| preprotein translocase subunit SecY [Rhodococcus opacus M213]
gi|430776899|gb|ELB92292.1| preprotein translocase subunit SecY [Rhodococcus wratislaviensis
IFP 2016]
Length = 437
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 243/423 (57%), Gaps = 30/423 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV---NREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
K L LG +AL R+G IP GV N A V L D + S ++ FSGG + +L I
Sbjct: 17 KILIALGLVALYRIGAVIPSPGVDYGNVRACVDQLSGGDSAGIYSLINLFSGGALLQLSI 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + PK ++L+K EG++G+ K+ QYTRY S+ AI+QA G V
Sbjct: 77 FAIGIMPYITASIIVQLLTVVIPKFEELRK-EGQSGQAKMTQYTRYLSIALAILQATGIV 135
Query: 203 LYL----------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+ D S ++ V ++T G+A + GE I++ +GNG SLLIF
Sbjct: 136 ALASRGQLLQGCQEEIIADKSIFGLVIIVLVMTAGAALVMWFGEVITERGVGNGMSLLIF 195
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
+ I S LP+ G+ + ++ G I A I ++ + ++ G+V+V++ +R+IP+ YA R
Sbjct: 196 SGIASRLPSE-GKAILDS--RGGLI-FAIICVAALAIIAGVVFVEQGQRRIPVQYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA--------VA 364
R S YLP KVN +G++P+IF++S L LP +A+ TG + +
Sbjct: 252 GRKMYGGSSTYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSSADPSWWQRIINEYL 311
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+NP Y+ LI FF ++Y + +P++ ++++K+ G IP +RPG+ TA +L V
Sbjct: 312 VNPNNPVYIVIYFALIVFFVFFYVAITFNPEERADEMKKFGGFIPGIRPGRPTADYLNYV 371
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI+V GS++L ++A P + T+ F G +VLILV A DT ++++++++ +
Sbjct: 372 LNRITVPGSIYLGLIAVLPHFFLSGSQ-TSSSIFGGAAVLILVSVALDTVKQIESQLMQR 430
Query: 485 KYK 487
Y+
Sbjct: 431 NYE 433
>gi|410658508|ref|YP_006910879.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|410661495|ref|YP_006913866.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
gi|409020863|gb|AFV02894.1| Preprotein translocase secY subunit [Dehalobacter sp. DCA]
gi|409023851|gb|AFV05881.1| Preprotein translocase secY subunit [Dehalobacter sp. CF]
Length = 429
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 240/406 (59%), Gaps = 19/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+G +IP+ ++RE + L ++FSGG + R + SL I+P+I A I+
Sbjct: 26 LLIFRIGSHIPIPFMDREVLQNMMGSGGLFDFFNTFSGGSLKRFSVFSLSIMPYITASII 85
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-----PYVND 211
QLL + P L+ L K EG+ GRKK++QYTRY +V + G + LR P +
Sbjct: 86 IQLLTVVIPYLERLSK-EGDQGRKKIVQYTRYGTVVLGFINGFGLTIGLRGALTIPQESL 144
Query: 212 FSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF 271
+++ ++ +LT G+AF ++GE+I++ +GNG SL+IF I++ +P + + +
Sbjct: 145 RILIYIMIAI-VLTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVAGIPDAI-KYLVGLL 202
Query: 272 QDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVN 329
Q G +I + +++ L++ +V++QE +R+IP+ YA R R +S+++P KVN
Sbjct: 203 QVGEIGWISIVGLVVIAALIIAAVVFIQEGQRRIPVQYAKRVVGRKQYGGQSSHIPLKVN 262
Query: 330 SSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNI---LLIAF 382
+GV+PIIF S +A P T+A + + A + + +N G ++ +P I LLI F
Sbjct: 263 QAGVIPIIFGISLMAFPATIATWLPQDSAFALFAQKWLQMN-GSAYSIPYLIMYALLIIF 321
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F Y+YT + +P DV++ LK+ G IP +RPG+ T+ +L +LSR+++ G +FLA++A
Sbjct: 322 FTYFYTGITFNPVDVADNLKKYGGFIPGIRPGRPTSDYLFKILSRVTLAGGIFLALIAVL 381
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
P++I T + GTS+LI+V A DT ++++ +++ + Y+
Sbjct: 382 PSLIMGFTGIDNIY-LGGTSLLIVVSVALDTMKQMENQLMQRHYQG 426
>gi|338734005|ref|YP_004672478.1| preprotein translocase subunit secY [Simkania negevensis Z]
gi|336483388|emb|CCB89987.1| preprotein translocase subunit secY [Simkania negevensis Z]
Length = 457
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 241/433 (55%), Gaps = 34/433 (7%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRL 140
L K + L L + R+G YIP+ G+N + V Q +LL +D FSGG ++
Sbjct: 14 LKQKIVFTLAMLLVCRIGAYIPVPGINGDEVVQIFRQMTGGGQNLLQLVDVFSGGAFAKM 73
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA-- 198
I +LG++P+I+A I+ Q+L + P +Q + GEAG++K+ + R A+V A+ Q+
Sbjct: 74 TIIALGVMPYISASIIMQVLVAVVPSMQREIRENGEAGKRKMGKMIRIATVFLALFQSAL 133
Query: 199 ----------------IGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
+ Q++ ++ + F + L + ++ G+ F ++GE+I++
Sbjct: 134 LAKYALSLNVAHPGVIVDQLINVQ--IGGFPWLFYLVIMFAMSAGTLFLMWVGEQITERG 191
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG------LATIIISFILLVLGIVYV 296
+GNG SL+I I++ LP + G V++ D G + + I F+L+++G + V
Sbjct: 192 IGNGISLIITIGILASLPMTLGSIVSQLNLDSQEPGQLTFSSIVILSIVFVLIIIGTILV 251
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ RKIP+ YA R R S+++P KVN +GV+P+IF++S L P T+A+F G
Sbjct: 252 IQGTRKIPLQYARRVVGRHETQGGSSHIPLKVNYAGVIPVIFASSLLMFPATIAQFIGRG 311
Query: 357 -ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGK 415
L + L+PG Y +LLI FF Y++T Q P+ ++ +K+ GA IP +R GK
Sbjct: 312 NWLSNVVMWLSPGSWVYTTLFVLLIMFFTYFWTATQFHPEXIASDMKKNGAFIPGIRQGK 371
Query: 416 STAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTA--FRGFAGTSVLILVGCATDT 473
T FL++ ++RI++ GSVFLA +A P ++ + + A F GTS+LILVG DT
Sbjct: 372 PTQEFLESTMNRITLAGSVFLAFIAILPTLVGKILGVDASISHFFGGTSLLILVGVVLDT 431
Query: 474 ARKVQAEIISQKY 486
+++++ ++ ++Y
Sbjct: 432 TKQIESHLLMKRY 444
>gi|254470026|ref|ZP_05083430.1| preprotein translocase, SecY subunit [Pseudovibrio sp. JE062]
gi|374332201|ref|YP_005082385.1| SecY protein [Pseudovibrio sp. FO-BEG1]
gi|211960337|gb|EEA95533.1| preprotein translocase, SecY subunit [Pseudovibrio sp. JE062]
gi|359344989|gb|AEV38363.1| SecY protein [Pseudovibrio sp. FO-BEG1]
Length = 446
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 249/437 (56%), Gaps = 20/437 (4%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFV---GNLDQN 123
AA S+++F F K L + LG L + R G YIPL G+N +A GN+ Q
Sbjct: 4 AAEQLASNLNFSAFAKAEELKKRIWFTLGALLVYRFGTYIPLPGINPDALAQAFGNV-QT 62
Query: 124 SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVL 183
++ + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRKK+
Sbjct: 63 GIVGLFNMFSGGAVERMAIFALGIMPYISASIIIQLMTSVVPTLEQL-KKEGEQGRKKIN 121
Query: 184 QYTRYASVGFAIVQAIGQVLYLRPYVN-DFSTDWVLTSVTLLTL--GSAFTTYIGERISD 240
QYTR+ +V A QA G + L N W T+LTL G+ F ++GE+I+
Sbjct: 122 QYTRFGTVILATFQAYGISVGLEAGTNIVIDPGWFFRIATVLTLVGGTMFLMWLGEQITS 181
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQE 298
+GNG SL+IF I++ LP++ T+ Q I LA +I+S +++ + IV+++
Sbjct: 182 RGIGNGISLIIFAGIVAGLPSAIASTLELGRQGALATPIILAVVILSVVVIGV-IVFMER 240
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-----T 353
A+R++ I Y R +++LP K+N++GV+P IF++S L +P T++ F T
Sbjct: 241 AQRRLLIQYPRRQQGNKMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATVSSFQTGDST 300
Query: 354 G-IAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
G +A L L G Y+ LI FF ++YT + +P + ++ LK+ G IP +R
Sbjct: 301 GSMAWLTTVTALLGHGQPAYMVLYAALIIFFCFFYTAIVFNPSETADNLKKHGGFIPGIR 360
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G++++ ++ P + T + + F GTS+LI+V D
Sbjct: 361 PGERTAQYIDHVLTRITVVGAIYITLICLLPEFLISATGVPFY--FGGTSLLIVVSVTMD 418
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +++ +Y+ +
Sbjct: 419 TVSQIQGHLLAHQYEGL 435
>gi|262038241|ref|ZP_06011631.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
gi|261747708|gb|EEY35157.1| preprotein translocase, SecY subunit [Leptotrichia goodfellowii
F0264]
Length = 432
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 238/403 (59%), Gaps = 18/403 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
L A++R+G++I + G+N AF N N++ L+ FSGG + R I SLGI+P+IN+
Sbjct: 28 LVMFAIARIGVHIAVPGINMAAF-KNFQNNAIAGFLNLFSGGAVQRASIFSLGIIPYINS 86
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--RP-YVN 210
IVFQLL I PK+ ++QK EG R K+ Q+TRY ++ AI Q+ G + L +P V
Sbjct: 87 SIVFQLLGVIFPKIDEMQK-EGGKERDKITQWTRYVTIILAIAQSFGIAITLINQPGLVV 145
Query: 211 DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
+ ++++++ L+T G+AF +I ERIS +GNG+S+LIF I+ LP + V+
Sbjct: 146 EPGPKFIISTMALMTGGTAFLMWISERISIRGIGNGSSMLIFLGIVVNLPQVIQQMVSS- 204
Query: 271 FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ----RSAYLPF 326
+ N+I II F++++ +V +Q AER+IPI YA + + GG Q R YLP
Sbjct: 205 --NINFIFFGLSIILFVVIIALMVDIQLAERRIPIQYAGKGSLGFGGGQSAVGRRTYLPL 262
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYY 386
K+N++GVMPIIF++ +A P + + A + + G YL LI F+++
Sbjct: 263 KINTAGVMPIIFASVLMAAPPFIVQMLKANAFWQK--QFSQTGVLYLLLFAFLIIVFSFF 320
Query: 387 YTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
YT + DP+ VSE LK+ G +IP VR GK TA +L+ V++R++ ++FLAIL P +
Sbjct: 321 YTLTIAFDPEKVSEDLKQSGGTIPTVRAGKETADYLEKVVTRVTFGSALFLAILGIFPNI 380
Query: 446 -IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
H+ G GTS+LILVG A + +++ + + +K K
Sbjct: 381 WFGYFLHIPVLLG--GTSLLILVGVAVELIQQIDSYLAVKKMK 421
>gi|453381938|dbj|GAC83406.1| preprotein translocase subunit SecY [Gordonia paraffinivorans NBRC
108238]
Length = 442
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 247/427 (57%), Gaps = 33/427 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDSFSGGGIGRLGI 142
K L +LG + L RLG +P GV+ +A LD+ +S+ S ++ FSGG + +L +
Sbjct: 17 KILFVLGIIILYRLGATVPSPGVDYQAVRQCLDEVSAGESSSVYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + P+ + L+K EG+AG+ K+ QYTRY +V A++Q+ G V
Sbjct: 77 FAIGIMPYITASIIVQLLTVVIPRFEQLRK-EGQAGQAKMTQYTRYLAVALALLQSTGIV 135
Query: 203 LY-----LRP--------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
L P ++D S + V ++T G++ + GE I++ +GNG SL
Sbjct: 136 ALADRGQLLPASCSTSGEVIHDSSIFGLAIIVLVMTAGASLVMWFGELITERGIGNGMSL 195
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
LIF I + +PA GRT+ G + A + ++ +L+V G+V++++ +R+IP+ YA
Sbjct: 196 LIFAGIAARIPAE-GRTILNT--RGGLV-FALVCVAALLIVAGVVFIEQGQRRIPVQYAK 251
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVA- 364
R R S YLP KVN +GV+P+IF++S L LP + T G + + V
Sbjct: 252 RMVGRKMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPQLIVELTRNPDGTQSTWQDYVTK 311
Query: 365 --LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+P Y+ L+I FF Y+Y + +P++ ++++K+ G IP +RPG TA +L
Sbjct: 312 YLTDPSNGVYIAVYFLMIIFFTYFYVAVTFNPEERADEMKKYGGFIPGIRPGAPTAEYLG 371
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAE 480
VLSRI++ GS++L I+A P + + + + + F GT+VLI+VG DT +++ ++
Sbjct: 372 YVLSRITLPGSIYLGIIAVLPNLFLEIGNSSNIQNLPFGGTAVLIMVGVGLDTMKQINSQ 431
Query: 481 IISQKYK 487
++ +KY+
Sbjct: 432 LMQRKYE 438
>gi|420243280|ref|ZP_14747222.1| preprotein translocase, SecY subunit [Rhizobium sp. CF080]
gi|398062510|gb|EJL54283.1| preprotein translocase, SecY subunit [Rhizobium sp. CF080]
Length = 446
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 246/437 (56%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNS 124
AA S+++F F K L + L L + RLG +IPL G+N EA+
Sbjct: 4 AAEQLASNLNFATFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +LGI+P+I+A I+ QL+ + P L++L K+EGEAGRK + Q
Sbjct: 64 ILGLFNMFSGGAVERMAIFALGIMPYISASIIVQLMTSVVPSLENL-KKEGEAGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G L V D + L++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGTLQAYGIAAGLESGQGLVVDPGWFFKLSTVVTLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLV-LG----IVYV 296
+GNG SL+IF+ I + LP + T+ + G L T +I +L+V +G IV+V
Sbjct: 183 GIGNGISLIIFSGIAAGLPTALAGTL----ELGRTGALPTALILTVLIVAIGVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N+SGV+P IF++S L LP T A F G A
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATAAGFAGNA 298
Query: 357 ALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A AL G ++ LLIAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 GLPDWATMIISALGHGQPLFMLFYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P + T + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVIGAIYLVFVCILPEFLVARTGVPLALG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|365860344|ref|ZP_09400157.1| preprotein translocase subunit SecY [Streptomyces sp. W007]
gi|364010196|gb|EHM31123.1| preprotein translocase subunit SecY [Streptomyces sp. W007]
Length = 437
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 238/435 (54%), Gaps = 31/435 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNR---EAFVGNLDQNSLLSTLDSFS 133
F FK P L K L LG + + RLG ++P GV+ + + D LL + FS
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRLGAHVPAPGVDYTKVQQCIDQADSGGLLGLMQMFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVAL 123
Query: 194 AIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
A++Q G V R V D S + V +T G+A ++GE I+D
Sbjct: 124 AVLQGTGLVATARSGALFQNCSVGSQIVADKSVFTTIIMVLTMTAGTAAVMWLGELITDR 183
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAER 301
+GNG S+L+F SI + P + +I T+I+ ++V +V+V++A+R
Sbjct: 184 GIGNGMSILMFISIAATFPGALWAIKESGKLADGWIEFGTVILIGFVMVGLVVFVEQAQR 243
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSQAGWAT 303
Query: 362 AVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
+ N G +Y+ LLI FF ++Y + +PD+V++ +K+ G IP +R G+ TA
Sbjct: 304 WITDNFVGQNEPYYMVAYFLLIVFFAFFYVAISFNPDEVADNMKKYGGFIPGIRAGRPTA 363
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCATD 472
+L VL+RI+ GS++LA++A P T L F G F GTS+LI+VG +
Sbjct: 364 EYLSYVLNRITWPGSLYLALIALVP-----TMALAGFGGANANFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYK 487
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYE 433
>gi|366163729|ref|ZP_09463484.1| protein translocase subunit secY/sec61 alpha [Acetivibrio
cellulolyticus CD2]
Length = 429
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 240/419 (57%), Gaps = 18/419 (4%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
FK P L K L L L + RLG ++P+ G+ ++ D SGG
Sbjct: 12 FKIPDLRRKMLISLVILIIFRLGSHVPVPGMIASKLKELAGTGTIFGFFDIVSGGAFSNA 71
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I ++ I P++N+ I+ QLL PKL+ L K EGE GRK + +Y RY +V A +QA G
Sbjct: 72 TIFAMSITPYVNSSIIMQLLTVAIPKLEQLAK-EGEEGRKIIGRYIRYGTVVLAFLQATG 130
Query: 201 QVLYLRPYVNDFSTDWVLTSVTL-LTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
LR V++ + ++TL T G+AF ++GE++++ +GNG SLLIF I+S
Sbjct: 131 LYFGLRGAVSN-PGVFAFATITLSFTAGTAFLMWLGEQLTEYGIGNGISLLIFGGIVSRA 189
Query: 260 PASFGRTVAEAFQDGNY--------IGLATIIISFILLVLGIVYVQEAERKIPINYASRY 311
P + F+ G + +GLA ++ F+L++ +V++Q+AER+IP+ YA R
Sbjct: 190 PQG-AWALWSNFKMGKFGGTGILGVLGLAAVLFVFLLIIALVVWIQQAERRIPVQYAKRV 248
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
R +S ++P KVN +GV+PIIF+ S +ALP TL F + + V
Sbjct: 249 VGRKMYGGQSTHIPIKVNLAGVIPIIFAMSFVALPSTLVGFFAPTS-ENWIVKYFRNMQS 307
Query: 372 YLPTNI---LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
++ +I LLI FF ++YT++Q +P +++ +K+ G IP +RPGK T+ ++ VL+RI
Sbjct: 308 HIEISILSGLLIMFFTFFYTYIQFNPVELANNMKKNGGFIPGIRPGKPTSDYITKVLNRI 367
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ ++FLA++ P+V+ TH+ F+GTSVLILVG A DT ++++++++ + YK
Sbjct: 368 TWFSALFLAVIQIFPSVVGAITHIDNVW-FSGTSVLILVGVALDTVKQIESQMLMRHYK 425
>gi|392309054|ref|ZP_10271588.1| preprotein translocase subunit SecY [Pseudoalteromonas citrea NCIMB
1889]
Length = 442
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 239/418 (57%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAEFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL I+P + +L K+EGE GRKK+ QYTRY ++ A Q+IG
Sbjct: 78 ALGIMPYISASIIMQLLTHIHPAMIEL-KKEGEQGRKKISQYTRYGTLVLATFQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPSMMDGLVVNPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P++ G T AE + G+ LA ++I+ I+ + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGST-AEMARQGDLHVLALLLIAVIVFAVTYLVVFFERGQRRIVVNYAKRQQGRQVF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA------ALKKAAVALNPGGSF 371
+S +LP KVN +GV+P IF++S + PGT+A + G L+ + L PG
Sbjct: 256 AAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAISAVLTPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 316 YAMVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLA 375
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 376 GALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHMMSHQYDSV 431
>gi|433775478|ref|YP_007305945.1| preprotein translocase, SecY subunit [Mesorhizobium australicum
WSM2073]
gi|433667493|gb|AGB46569.1| preprotein translocase, SecY subunit [Mesorhizobium australicum
WSM2073]
Length = 446
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 244/433 (56%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + +G L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLEAL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+VQA G + L V+D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLALVQAYGISVGLENGNGIVSDPGMFFRISTVVTLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+IF+ I++ LP + T+ GL II ++V+ IV+ + A+
Sbjct: 183 GIGNGISLIIFSGIVAGLPHAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A F+ +
Sbjct: 243 RRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATVAGFSQTTNMPA 302
Query: 361 AA----VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
A +L G Y+ +I FF ++YT + +P D ++QLK+ IP RPG+
Sbjct: 303 WASTILASLGHGQPLYMAFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G+++L ++ P + T + + G GTS+LI+V DT +
Sbjct: 363 TADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLG--GTSLLIVVSVTLDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+Q +I+ +Y+ +
Sbjct: 421 IQGHLIAHQYEGL 433
>gi|441511786|ref|ZP_20993634.1| preprotein translocase SecY subunit [Gordonia amicalis NBRC 100051]
gi|441453444|dbj|GAC51595.1| preprotein translocase SecY subunit [Gordonia amicalis NBRC 100051]
Length = 442
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 245/427 (57%), Gaps = 33/427 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDSFSGGGIGRLGI 142
K L +LG + L RLG +P GV+ +A LD+ +S+ S ++ FSGG + +L +
Sbjct: 17 KILFVLGIIVLYRLGATVPSPGVDYQAVRACLDEVSAGESSSVYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+P+I A I+ QLL + P+ + L+K EG+AG+ K+ QYTRY +V A++Q+ G V
Sbjct: 77 FAIGIMPYITASIIVQLLTVVIPRFEQLRK-EGQAGQAKMTQYTRYLAVALALLQSTGIV 135
Query: 203 LY-----LRP--------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSL 249
L P +ND S + V ++T G+ + GE I++ +GNG SL
Sbjct: 136 ALADRGQLLPQSCATSGEVLNDSSIFGLAIIVLVMTAGACVVMWFGELITERGIGNGMSL 195
Query: 250 LIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
LIF I + +PA GRT+ G + A + ++ +++V G+V++++ +R+IP+ YA
Sbjct: 196 LIFAGIAARIPAE-GRTILNT--RGGLV-FALVCVAALIIVAGVVFIEQGQRRIPVQYAK 251
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVA- 364
R R S YLP KVN +GV+P+IF++S L LP + T G + + V
Sbjct: 252 RMVGRKMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPQLIVELTRSTDGTQSTWQEYVTK 311
Query: 365 --LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+P Y+ L+I FF Y+Y + +P++ ++++K+ G IP +RPG TA +L
Sbjct: 312 YLTDPSNGVYIAVYFLMIIFFTYFYVAVTFNPEERADEMKKYGGFIPGIRPGAPTAEYLG 371
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAE 480
VLSRI++ GS++L I+A P + + + + F GT+VLI+VG DT +++ ++
Sbjct: 372 YVLSRITLPGSIYLGIIAVLPNLFLEIGNSGNVQNLPFGGTAVLIMVGVGLDTMKQINSQ 431
Query: 481 IISQKYK 487
++ +KY+
Sbjct: 432 LMQRKYE 438
>gi|333368252|ref|ZP_08460462.1| preprotein translocase subunit SecY [Psychrobacter sp. 1501(2011)]
gi|332977642|gb|EGK14410.1| preprotein translocase subunit SecY [Psychrobacter sp. 1501(2011)]
Length = 443
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 245/416 (58%), Gaps = 21/416 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN----REAFVGNLDQNSLLSTLDSFSGGGIGRLGICS 144
+ L L+G L + RLG +IP+ G+N E F N +N++LS + FSGG + R+ I +
Sbjct: 28 RLLFLMGALVVYRLGSHIPVPGINPVSLAELFSRN--ENTILSMFNMFSGGALERMSIMA 85
Query: 145 LGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLY 204
LGI+P+I+A I+ Q+++ + P L+ L K+EGE+GR+K+ +YTR ++ A +QAI
Sbjct: 86 LGIMPYISASIIVQMMSAVLPSLEAL-KKEGESGRRKLNKYTRQGTLFLASIQAIFMCTG 144
Query: 205 LRPYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
L S+ + + +V+ L G+ F ++GE+I++ +GNG S+LIF SI++ +P+
Sbjct: 145 LISQNLTLSSGLTFYIPAVSSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVASVPSM 204
Query: 263 FGRTVAEAFQD-GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT-SRSGGLQR 320
G++ D + I L + I + GIV+++ A+R+IP+NYA + R +
Sbjct: 205 LGQSFDMVKNDPQSLIVLLVFAVLGIAVTAGIVFIERAQRRIPVNYAQKQQLGRKIYADQ 264
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGGSFY 372
++LP K+N +GV+P IF+++ L P +L ++ G +A L+ ++ L PG Y
Sbjct: 265 QSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNSADPSAWQQFLQTLSLVLAPGQPLY 324
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L +I FF Y+YT L P +V+E LKR GA IP +RPG T +L VL+R++ +G
Sbjct: 325 LVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGLQTQRYLDHVLNRLTFIG 384
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++++ ++ P +++ + + G GTS+LI+V D ++QA +++ +Y
Sbjct: 385 AIYMTVICLMPMLLQSSFGIPFHLG--GTSLLIMVVVVMDFISQLQAHLMTHQYHE 438
>gi|254372229|ref|ZP_04987720.1| preprotein translocase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151569958|gb|EDN35612.1| preprotein translocase [Francisella novicida GA99-3549]
Length = 441
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 254/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFILHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|452126802|ref|ZP_21939385.1| preprotein translocase subunit SecY [Bordetella holmesii F627]
gi|452130175|ref|ZP_21942748.1| preprotein translocase subunit SecY [Bordetella holmesii H558]
gi|451921897|gb|EMD72042.1| preprotein translocase subunit SecY [Bordetella holmesii F627]
gi|451923035|gb|EMD73179.1| preprotein translocase subunit SecY [Bordetella holmesii H558]
Length = 441
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 248/432 (57%), Gaps = 18/432 (4%)
Query: 68 AAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--L 125
A A+ + +GD L + + L+ L + RLG +IP+ G+N +A QN +
Sbjct: 4 AQALGKTGTRYGD-----LKRRIVFLVLALVVYRLGTHIPVPGINPDALADLFRQNQGGI 58
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
L + FSGG + R I +LGI+P+I+A I+ QL++ + P L+ L K+EGEAGR+K+ QY
Sbjct: 59 LGLFNMFSGGALSRFSIFALGIMPYISASIIMQLMSVVVPSLEAL-KKEGEAGRRKITQY 117
Query: 186 TRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLK 242
TRY +V A+VQA+G + L V D + T++ L G+ F ++GE+I++
Sbjct: 118 TRYGTVVLALVQAVGISVALESQPGLVVDPGMLFRFTTIVTLVTGTMFVMWLGEQITERG 177
Query: 243 LGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAER 301
LGNG S+LIFT I++ LP + + + + A II+ ++LV +V+V+ +R
Sbjct: 178 LGNGISILIFTGIVAGLPTALAGLLDLVRTNSMSVVSALFIIALVVLVTAFVVFVERGQR 237
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TG--IAA 357
KI +NYA R +S++LP K+N +GV+P IF++S + P T+ + TG +
Sbjct: 238 KITVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFSTGDRMVW 297
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
L+ A AL P Y+ + I FF ++YT L + + ++ LK+ GA +P +RPG+ T
Sbjct: 298 LRDLAAALEPRQPLYITLYSVAIIFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGEQT 357
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ +L R+++ G++++ ++ P + ++ + F GTS+LI+V D +V
Sbjct: 358 ARYIDKILMRLTLAGALYITLVCLLPEFLVMRWNVPFY--FGGTSLLIIVVVTMDFMAQV 415
Query: 478 QAEIISQKYKNI 489
QA ++S +Y ++
Sbjct: 416 QAYMMSHQYDSL 427
>gi|443625120|ref|ZP_21109571.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
gi|443341383|gb|ELS55574.1| putative protein translocase subunit SecY [Streptomyces
viridochromogenes Tue57]
Length = 437
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 244/436 (55%), Gaps = 31/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F FK P L K L LG + + R+G ++P+ GV+ A +DQ S + ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRVGTHVPIPGVDYTAVQVCVDQASANQGIFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D S + V +T G+A ++GE I+D
Sbjct: 124 LAILQGTGLVATARSGALFQGCPVAGQIVPDRSIFTTMVMVITMTAGTALVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + PA+ E +I T+I+ +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPAALWAIKQEGSLADGWIEFGTVILVGLVMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G + K
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIAQFAGGTSGWK 303
Query: 361 AAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ + +Y+ + LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWIEQHLVQGNHPYYIVSYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYKN 488
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYEG 434
>gi|29653610|ref|NP_819302.1| preprotein translocase subunit SecY [Coxiella burnetii RSA 493]
gi|154707133|ref|YP_001425162.1| preprotein translocase subunit SecY [Coxiella burnetii Dugway
5J108-111]
gi|161829790|ref|YP_001596205.1| preprotein translocase subunit SecY [Coxiella burnetii RSA 331]
gi|29540872|gb|AAO89816.1| protein translocase subunit [Coxiella burnetii RSA 493]
gi|154356419|gb|ABS77881.1| protein translocase subunit [Coxiella burnetii Dugway 5J108-111]
gi|161761657|gb|ABX77299.1| preprotein translocase, SecY subunit [Coxiella burnetii RSA 331]
Length = 442
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 249/411 (60%), Gaps = 38/411 (9%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
RLG YIP+ G++ R A + + + L + FSGG + R+ I +LG++P+I++ I+ Q
Sbjct: 33 RLGAYIPVPGLDPSRLAALFHQHETGFLGMFNMFSGGALSRMTIFALGVMPYISSSIIVQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL 218
+ +QI+PK+Q L+K EGEAGR+K+ QYTRY +V +++Q + F T W++
Sbjct: 93 MYSQISPKMQALRK-EGEAGRRKINQYTRYGTVILSLLQ------------SAFMTKWLV 139
Query: 219 TS---------------VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+S VTL+T G+ F ++GE++++ +GNG SL+IF SI S PA+
Sbjct: 140 SSGTVINPNLGFYFTAIVTLVT-GTMFLMWLGEQMTERGVGNGISLIIFASIASRFPAAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G+ + Q + + L +I +L+ L +V+ + A+R+I INYA R R +S+
Sbjct: 199 GQVFTQVRQGQMSVLILLLLIAVIVLVTLVVVFFERAQRRITINYAKRQQGRKLYAAQSS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVALNPGGSFYLPTNIL 378
+LP K+N +GV+P+IF+ S + PG +A+F G+ L ++AL+ G Y+ +
Sbjct: 259 HLPLKINMAGVIPVIFAQSIILFPGAVAKFMSSVKGLGWLNDVSLALSYGQPAYIVVFAI 318
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
+ FF+++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R++++GSV+LA+
Sbjct: 319 AVIFFSFFYTALVFNPKETADNLKKSGAFIPGIRPGEQTANYIDKVMTRLTLVGSVYLAL 378
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P + ++ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 379 VALLPQFLILAWNVPFY--FGGTSLLIVVVVIMDFMAQVQAHLMSHQYESL 427
>gi|302536271|ref|ZP_07288613.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
gi|302445166|gb|EFL16982.1| preprotein translocase, SecY subunit [Streptomyces sp. C]
Length = 437
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 249/438 (56%), Gaps = 37/438 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + L RLG +IP+ GV+ + +DQ NSL ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVLYRLGSHIPVPGVSYKNVQICVDQMGSSNSLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + PKL++L K+EG++G K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPKLENL-KKEGQSGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVL------------YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V + S +T V +T G+ ++GE I+D
Sbjct: 124 LAILQGTGLVATARTGALFGTCPVAREIVPNHSIFTTITMVLTMTAGTCVVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIIS-YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEA 299
+GNG S+L+F SI + ++ A + + DG ++ A +I+ + +V +V+V++A
Sbjct: 184 RGIGNGMSILMFISIAAGFVGALWTIKLQGKIADG-WVEFAVVILVGLAMVALVVFVEQA 242
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-- 357
+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+G A
Sbjct: 243 QRRIPVQYAKRMIGRRAYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSGSTAGW 302
Query: 358 ---LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++K V + +Y+ LLI FF ++Y + +P++V++ +K+ G IP +R G
Sbjct: 303 ATWIQKHFVKGDH--PYYIAAYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAG 360
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGC 469
+ TA +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG
Sbjct: 361 RPTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGANQNFPFGGTSILIIVGV 415
Query: 470 ATDTARKVQAEIISQKYK 487
+T +++++++ + Y+
Sbjct: 416 GLETVKQIESQLQQRNYE 433
>gi|212213230|ref|YP_002304166.1| preprotein translocase subunit SecY [Coxiella burnetii CbuG_Q212]
gi|212011640|gb|ACJ19021.1| protein translocase subunit [Coxiella burnetii CbuG_Q212]
Length = 442
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 249/411 (60%), Gaps = 38/411 (9%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
RLG YIP+ G++ R A + + + L + FSGG + R+ I +LG++P+I++ I+ Q
Sbjct: 33 RLGAYIPVPGLDPSRLAALFHQHETGFLGMFNMFSGGALSRMTIFALGVMPYISSSIIVQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL 218
+ +QI+PK+Q L+K EGEAGR+K+ QYTRY +V +++Q + F T W++
Sbjct: 93 MYSQISPKMQALRK-EGEAGRRKINQYTRYGTVILSLLQ------------SAFMTKWLV 139
Query: 219 TS---------------VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+S VTL+T G+ F ++GE++++ +GNG SL+IF SI S PA+
Sbjct: 140 SSGTVINPNLGFYFTAIVTLVT-GTMFLMWLGEQMTERGVGNGISLIIFASIASRFPAAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G+ + Q + + L +I +L+ L +V+ + A+R+I INYA R R +S+
Sbjct: 199 GQVFTQVRQGQMSVLILLLLIAVIVLVTLVVVFFERAQRRITINYAKRQQGRKLYAAQSS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVALNPGGSFYLPTNIL 378
+LP K+N +GV+P+IF+ S + PG +A+F G+ L ++AL+ G Y+ +
Sbjct: 259 HLPLKINMAGVIPVIFAQSIILFPGAVAKFMSSVKGLGWLNDVSLALSYGQPAYIVVFAI 318
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
+ FF+++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R++++GSV+LA+
Sbjct: 319 AVIFFSFFYTALVFNPKETADNLKKSGAFIPGIRPGEQTANYIDKVMTRLTLVGSVYLAL 378
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P + ++ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 379 VALLPQFLILAWNVPFY--FGGTSLLIVVVVIMDFMAQVQAHLMSHQYESL 427
>gi|53803437|ref|YP_114768.1| preprotein translocase subunit SecY [Methylococcus capsulatus str.
Bath]
gi|53757198|gb|AAU91489.1| preprotein translocase, SecY subunit [Methylococcus capsulatus str.
Bath]
Length = 441
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 252/417 (60%), Gaps = 21/417 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGICSLG 146
+ L ++G L + R+G +IP+ GV+ +A +Q +S+L ++ FSGG + RL I +LG
Sbjct: 21 RLLFVVGALIVFRIGAHIPIPGVDPKALAAMFNQQGSSILDMVNMFSGGALKRLSIFALG 80
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ QL+ + PKL+ L K+EGE+GRKK+ QYTRYA+V A QA G + L+
Sbjct: 81 IMPYISASIILQLMTIVVPKLEQL-KKEGESGRKKINQYTRYATVVLASFQATGVAMALQ 139
Query: 207 -------PYVNDFSTDWV-LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V +V LT+++L+T G+ F ++GE++++ LGNG S++IF I++
Sbjct: 140 NQSAGGAPIVVSPGFQFVALTAISLVT-GTMFLMWLGEQVTERGLGNGISIIIFAGIVAG 198
Query: 259 LPASFGRTV--AEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP++ G T+ A + G + + I+ + L +V+V++ +R+I INYA R R
Sbjct: 199 LPSAVGGTLELARTGELGAFSIIGIAAIAVAVTWL-VVFVEKGQRRITINYAKRQEGRRM 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
+ ++LP K+N SGV+P IF++S + P TLA + G + L+ A L+PG Y
Sbjct: 258 YAAQKSFLPLKLNMSGVIPPIFASSIILFPATLAGWFGNSEKLIWLQDIASTLSPGQPLY 317
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ I FF ++Y L + ++ +E LK+ GA IP +RPG+ TA ++ TV++R++++G
Sbjct: 318 VLCYAAAIMFFCFFYAALVFNSNETAENLKKSGAFIPGIRPGQQTARYVDTVMTRLTLIG 377
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D ++Q +ISQ+Y+ +
Sbjct: 378 GIYITAVCLLPEFLIVYWNVPFY--FGGTSLLIIVVVVMDFMAQIQTYVISQQYEGL 432
>gi|205372050|ref|ZP_03224867.1| preprotein translocase subunit SecY [Bacillus coahuilensis m4-4]
Length = 430
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 244/425 (57%), Gaps = 31/425 (7%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G + K + L L + RLG +IP+ GV+ + + DQ +L L++F GG + I
Sbjct: 12 GDIRNKIIFTLLMLVVFRLGTFIPVPGVDADV-LKLADQPGILGFLNTFGGGALSNFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI--- 199
++GI+P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ +QA+
Sbjct: 71 AMGIMPYITASIIVQLLQMDVVPKFTEWSK-QGEVGRRKLAQFTRYFTIVLGFIQALAMS 129
Query: 200 -------GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
G VL P + ++ L +LT G+AF ++GE+I+ +GNG S+LIF
Sbjct: 130 YGFNQFYGGVLITNPGIGNY-----LVIALVLTAGTAFLMWLGEQITAKGVGNGISILIF 184
Query: 253 TSIISYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPIN 306
I++ +P + A+ + + LA I+++ + +V+G+++VQ+A RKIPI
Sbjct: 185 AGIVAAIPGGAVQLYAQQIEGAGEQLFIRIVILALIVLAILAIVVGVIFVQQALRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL- 365
YA R +RS +S +LP KVN++GV+P+IF+ S + P T+A F G ++ +
Sbjct: 245 YAKRMMNRSPVGGQSTHLPLKVNAAGVIPVIFAVSFIITPQTIASFVGSNSVTDTITYIF 304
Query: 366 ---NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
P G + + LI F Y+Y F+Q++P+ +E LK QG IP +RPG++T +L
Sbjct: 305 DYTQPVG---MLIYVALIIAFTYFYAFIQVNPEQAAENLKNQGGYIPGIRPGQATQEYLT 361
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 482
VL R++ +G+VFL++++ P + + L GTS+LI+VG A +T ++++A+++
Sbjct: 362 RVLYRLTFVGAVFLSVVSVLPILFIKFAGLPQSLQIGGTSLLIVVGVALETMKQLEAQLV 421
Query: 483 SQKYK 487
+ YK
Sbjct: 422 KRHYK 426
>gi|119472059|ref|ZP_01614317.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|359448651|ref|ZP_09238172.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
gi|392539511|ref|ZP_10286648.1| preprotein translocase subunit SecY [Pseudoalteromonas marina
mano4]
gi|119445194|gb|EAW26486.1| preprotein translocase, membrane component, transport across inner
membrane (General Secretory Pathway) [Alteromonadales
bacterium TW-7]
gi|358045552|dbj|GAA74421.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20480]
Length = 442
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 238/418 (56%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLADFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P +L K+EGE GRKK+ QYTRY ++ A +Q+IG
Sbjct: 78 ALGIMPYISASIITQLLTHMYPPFIEL-KKEGEQGRKKISQYTRYGTLVLATIQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L +N + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQ-DGN-YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
P++ G TV A Q D N ++ L +I F + L +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGSTVEMARQGDLNVFVLLMVAVIVFAVTYL-VVFFERGQRRIVVNYAKRQQGRQVF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA------ALKKAAVALNPGGSF 371
+S +LP KVN +GV+P IF++S + PGT+A + G AL+ A L PG
Sbjct: 256 AAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADALQAVATTLTPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 316 YSLVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLA 375
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 376 GALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|119718105|ref|YP_925070.1| preprotein translocase subunit SecY [Nocardioides sp. JS614]
gi|119538766|gb|ABL83383.1| protein translocase subunit secY/sec61 alpha [Nocardioides sp.
JS614]
Length = 437
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 246/434 (56%), Gaps = 29/434 (6%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGV---NREAFVGNLDQNS---LLSTLD 130
F + F+ P L K L ++ + + RLG +P GV N +A V + S L S ++
Sbjct: 5 FANAFRTPDLRRKLLFVVLIIGVFRLGSQVPTPGVDVGNVQACVDIATEGSNADLYSLVN 64
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
FSGG + +L I +LGI+P+I A I+ QLL + P+L+ L K+EG++G+ K+ QYTRY +
Sbjct: 65 MFSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLEAL-KKEGQSGQTKITQYTRYLT 123
Query: 191 VGFAIVQAIGQVLYLR-------------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
+G A++QA G V R P ++D T L V +T G+A ++GE
Sbjct: 124 LGLAVLQATGIVALARSGNLLQGCDPNTFPLLHDNGTSTFLVMVVTMTAGTAVIMWLGEL 183
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQ 297
I++ +GNG SLLIFT II+ P+S + G +I ++++ +++V +++V+
Sbjct: 184 ITEHGIGNGMSLLIFTQIIAGFPSSLWSVQSS---KGWWI-FGIVMVTGLVIVAAVIFVE 239
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA 357
+A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L LP L F A
Sbjct: 240 QAQRRIPVQYARRMVGRKMFGGSSTYIPLKVNQAGVIPVIFASSLLYLPAMLVSFNPNAD 299
Query: 358 LKKA----AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
+ A + + Y+ T LLI FF Y+Y + +P++V++ +K+ G IP +R
Sbjct: 300 SRWANWINSYLVRGDHPLYMLTFFLLIIFFTYFYVSITFNPNEVADNMKKYGGFIPGIRA 359
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
GK T +L VLSRI++ GS++L +++ P + F GTS+LI+VG DT
Sbjct: 360 GKPTEDYLSYVLSRITLPGSLYLGLISLIPLIAFAVIGANQNFPFGGTSILIMVGVGLDT 419
Query: 474 ARKVQAEIISQKYK 487
+++++++ + Y+
Sbjct: 420 VKQIESQLQQRNYE 433
>gi|425737498|ref|ZP_18855770.1| preprotein translocase subunit SecY [Staphylococcus massiliensis
S46]
gi|425481752|gb|EKU48910.1| preprotein translocase subunit SecY [Staphylococcus massiliensis
S46]
Length = 431
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 246/421 (58%), Gaps = 14/421 (3%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FFK + K L L + +LG YIP GVN +AF + +++F GG +
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKLGTYIPAPGVNPDAFDSKQGSQGVTDLMNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
I ++GI+P+I A IV QLL I PK ++ + +G+ GR+K+ TRY ++ A +Q
Sbjct: 67 NFSIFAMGIMPYITASIVMQLLQMDIVPKFKEWAE-QGDVGRRKINNVTRYFAIVLAFIQ 125
Query: 198 AIGQVL----YLRPYVNDFSTDW-VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+IG YL+ + +T W L +LT G+AF ++GE+I+ +GNG S++IF
Sbjct: 126 SIGMSFQFNNYLKGQLITDNTIWSYLLIAIVLTTGTAFLMWLGEQITQHGVGNGISIIIF 185
Query: 253 TSIISYLPASFGRTVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINY 307
I+S LPAS + +AF QD ++ + +I+ ILL +G +YV +A RKIPI Y
Sbjct: 186 AGILSTLPASLIQFYQQAFVGQDDTSMAWLKVLGLILGMILLTIGAIYVLQAIRKIPIQY 245
Query: 308 ASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALN 366
A + T + + YLP KVNS+GV+P+IF+ + LP TL F AA +K + +
Sbjct: 246 AKKQTGQQRLGSNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPDAAWAQKISDYAD 305
Query: 367 PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLS 426
P + + ++LI F Y+Y F+Q++P+ ++E L++QG+ +P +RPG+ T ++ VL
Sbjct: 306 PSHNVGMIVYVILIIAFTYFYAFVQVNPEKMAENLQKQGSYVPGIRPGEQTKKYITKVLY 365
Query: 427 RISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
R++ +GS+FLA ++ P + + +L GTS+LI++G A +T + ++A++ ++Y
Sbjct: 366 RLTFVGSIFLAAISILPILGTKLMNLPQSLQLGGTSLLIVIGVAIETMKSLEAQVGQKEY 425
Query: 487 K 487
K
Sbjct: 426 K 426
>gi|118496872|ref|YP_897922.1| preprotein translocase subunit SecY [Francisella novicida U112]
gi|194324095|ref|ZP_03057869.1| preprotein translocase, SecY subunit [Francisella novicida FTE]
gi|208780321|ref|ZP_03247662.1| preprotein translocase, SecY subunit [Francisella novicida FTG]
gi|254373711|ref|ZP_04989194.1| hypothetical protein FTDG_01494 [Francisella novicida GA99-3548]
gi|385792195|ref|YP_005825171.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|118422778|gb|ABK89168.1| preprotein translocase, subunit Y, membrane protein [Francisella
novicida U112]
gi|151571432|gb|EDN37086.1| hypothetical protein FTDG_01494 [Francisella novicida GA99-3548]
gi|194321542|gb|EDX19026.1| preprotein translocase, SecY subunit [Francisella tularensis subsp.
novicida FTE]
gi|208743689|gb|EDZ89992.1| preprotein translocase, SecY subunit [Francisella novicida FTG]
gi|328676341|gb|AEB27211.1| Preprotein translocase secY subunit [Francisella cf. novicida Fx1]
Length = 441
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 254/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|392553721|ref|ZP_10300858.1| preprotein translocase subunit SecY [Pseudoalteromonas spongiae
UST010723-006]
Length = 442
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 242/418 (57%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLAQFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QL+ ++P +L K+EGE GRKK+ Q+TRYA++ A Q+IG
Sbjct: 78 ALGIMPYITASIIMQLMTHMHPTYMEL-KKEGEQGRKKISQHTRYATLVLATFQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 SLPNMMSGLVVNPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGG 317
P++ G T AE + G+ L ++I+ I+ + +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGST-AEMARQGDLQPLVLLLIAVIVFAVTYLVVFFERGQRRIVVNYAKRQQGRQVF 255
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA------ALKKAAVALNPGGSF 371
+S++LP KVN +GV+P IF++S + PGT+A + G L+ ++AL+PG
Sbjct: 256 AAQSSHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADTLQTISLALSPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 316 YAMVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTLA 375
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 376 GALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHLMSHQYESV 431
>gi|383639951|ref|ZP_09952357.1| preprotein translocase subunit SecY [Streptomyces chartreusis NRRL
12338]
Length = 437
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 243/436 (55%), Gaps = 31/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD----QNSLLSTLDSF 132
F FK P L K L LG + + R+G +IP+ GV+ +D L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVVYRVGTHIPIPGVDYRNVQTCIDAAQANQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D S +T V +T G+AF ++GE I+D
Sbjct: 124 LAILQGTGLVATARSGALFQGCPVASQIVPDQSIFVTITMVITMTAGTAFVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + G +I T+I +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWAIKEQGSLAGGWIEFGTVIAVGLVMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G + K
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIAQFAGGTSGWK 303
Query: 361 AAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ + +Y+ + LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWIEQHFVKGDHPYYIISYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYKN 488
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYEG 434
>gi|421326113|ref|ZP_15776636.1| preprotein translocase subunit SecY [Vibrio cholerae CP1041(14)]
gi|424596128|ref|ZP_18035445.1| preprotein translocase subunit SecY [Vibrio cholerae CP1040(13)]
gi|395915771|gb|EJH26603.1| preprotein translocase subunit SecY [Vibrio cholerae CP1041(14)]
gi|408030282|gb|EKG66949.1| preprotein translocase subunit SecY [Vibrio cholerae CP1040(13)]
Length = 444
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 242/418 (57%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFSMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>gi|221133736|ref|ZP_03560041.1| preprotein translocase subunit SecY [Glaciecola sp. HTCC2999]
Length = 439
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 243/418 (58%), Gaps = 20/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + +LG + + RLG Y+P+ G++ +Q +++ + FSGG + R +
Sbjct: 17 LRSRLFFVLGAIIVFRLGSYVPIPGIDAAVLSQLFEQQKGTIVEMFNMFSGGALERASVL 76
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I A I+ QLL ++P + +L K+EGEAGR+K+ QYTRY ++ A Q+IG
Sbjct: 77 ALGIMPYITASIIIQLLTAVHPPMMEL-KKEGEAGRRKISQYTRYLTLVLATFQSIGVAT 135
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L ++ + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 136 GLPNLISGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 195
Query: 260 PASFGRTVAEAFQD----GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
P + G+T +A Q + +A I+I LV V+V+ A+R+I +NYA R R
Sbjct: 196 PTAIGQTAEQARQGEINLLFLLLIAAIVIGLTYLV---VFVERAQRRIVVNYAKRQQGRK 252
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSF 371
+S++LP KVN +GV+P IF++S + P T+A + G + L+ A+ L+PG
Sbjct: 253 VMQAQSSHLPLKVNMAGVIPPIFASSIILFPSTIAGWFGQNEATSWLQDVALLLSPGQPL 312
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ T+ +L V++R+++
Sbjct: 313 YVGLYAAAIIFFCFFYTALTFNPRETADNLKKSGAFVPGIRPGEQTSRYLDKVMTRLTLA 372
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 373 GALYITFVCLVPEFLLLTWNVPFY--FGGTSLLIIVVVIMDFMAQVQTHLMSSQYESV 428
>gi|407804474|ref|ZP_11151296.1| preprotein translocase subunit SecY [Alcanivorax sp. W11-5]
gi|407021572|gb|EKE33338.1| preprotein translocase subunit SecY [Alcanivorax sp. W11-5]
Length = 457
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 255/428 (59%), Gaps = 27/428 (6%)
Query: 93 LLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPF 150
LLG L + R+G +IP+ G+N +A DQN ++L+ + FSGG + R+ I +LG++P+
Sbjct: 29 LLGALVVFRIGAHIPVPGINPDAMARLFDQNRDTVLAMFNMFSGGALERMSIFALGVMPY 88
Query: 151 INAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-------QVL 203
I A IV QLL+ +NP L+ L+K EGE GR+K+ QYTRY +V A++Q+ G Q +
Sbjct: 89 ITASIVIQLLSAVNPTLEQLRK-EGEQGRRKITQYTRYLTVFLALIQSFGVAAGLYSQNV 147
Query: 204 YLRPYVNDFSTD---WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
L P N + D + +VT L G+ F ++GE+I++ +GNG S+LIF I++ LP
Sbjct: 148 TLVPE-NPATMDIFSFYFVAVTSLVTGTIFLMWLGEQITERGIGNGISMLIFAGIVAGLP 206
Query: 261 ASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
+ +T EA + G N + L +++ + ++ +V+ + +R+I +NYA R R
Sbjct: 207 GAVAQTF-EATRQGEMNLMILLAVLVVAVAVIFAVVFFERGQRRITVNYARRQQGRRMYA 265
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIA------ALKKAAVALNPGGSF 371
+ ++LP KVN +GV+P IF++S L P ++++ F G + A++ AL PG
Sbjct: 266 AQQSHLPLKVNMAGVIPAIFASSILLFPASISQWFAGSSDTWWANAMRITTDALMPGSPL 325
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ L I FF Y+Y L +P DV++ LK+ GA IP +RPG+ +A ++ TV+ R++++
Sbjct: 326 YILLFTLGIVFFCYFYAALMFNPKDVADNLKKSGAYIPGIRPGEQSARYIDTVMGRLTLV 385
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY-KNIE 490
G+ ++ + P ++ ++ + G GTS+LI+V D +V A+++S +Y K ++
Sbjct: 386 GAAYMTAVCLLPLFLQGMWNVPFYLG--GTSLLIVVVVVMDFWAQVNAQLMSTQYEKLMK 443
Query: 491 FYDIDSYG 498
++ YG
Sbjct: 444 KANLKGYG 451
>gi|328955893|ref|YP_004373226.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
gi|328456217|gb|AEB07411.1| protein translocase subunit secY/sec61 alpha [Coriobacterium
glomerans PW2]
Length = 427
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 243/424 (57%), Gaps = 24/424 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-----LLSTLDSFSGGGIGRL 140
L K L G L + R G ++P+ GV + + N ++ L+ FSGG + +
Sbjct: 14 LRSKILFTAGMLVVYRFGAHLPVPGVPFQGMMNLFGGNGSVASGAMALLNLFSGGALKYV 73
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
+ SLGI+P+I + I+ QLL + P L +L REGE G+ K+ QY+RY ++G A++ +IG
Sbjct: 74 SVFSLGIMPYITSSIILQLLQSVVPSLHEL-SREGEVGQTKITQYSRYLTLGLAVLNSIG 132
Query: 201 QVLYLRPYVNDFS------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
+ + Y F+ + + V L G+ +IGE I+ +GNG SL+IF +
Sbjct: 133 YLFLFKSYGVSFNGAGAPEAIFDIMVVGTLVAGAMLIMWIGELITQRGIGNGMSLIIFAN 192
Query: 255 IISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSR 314
I++ LP + + + + + ++I ++ + IV+++ +R+IP+ YA R R
Sbjct: 193 IMAGLPQAIVSSSSAGLKGIIVTIVVFVVILLVIPL--IVFIERGQRRIPVQYAKRVVGR 250
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYL 373
+S YLP KVN++GV+PIIF+++ L P +A F GI ++ AA AL+ G ++
Sbjct: 251 RIMGGQSTYLPIKVNTAGVVPIIFASALLYFPAQIAVFFPGIDFIQTAAGALSAGWLNWV 310
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
N++ I FF Y+YT + +PDD ++ LK+QG IP VRPG++TAA++K L++I++ +
Sbjct: 311 -LNVVFIVFFAYFYTSMVFNPDDTADNLKKQGGFIPGVRPGRATAAYIKNALNKITLPSA 369
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD 493
VFLA++A P+V+ T + F GTSVLI+VG DT KV+++ ++ YD
Sbjct: 370 VFLAVIAIVPSVVFSFTGNRLIQSFGGTSVLIMVGVVLDTIAKVESQ--------LKMYD 421
Query: 494 IDSY 497
D +
Sbjct: 422 YDGF 425
>gi|221632959|ref|YP_002522182.1| preprotein translocase subunit SecY [Thermomicrobium roseum DSM
5159]
gi|221155417|gb|ACM04544.1| preprotein translocase, SecY subunit [Thermomicrobium roseum DSM
5159]
Length = 432
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 237/422 (56%), Gaps = 18/422 (4%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
FK P L K L LG L + R IP+ GV+++A L+ N L L+ FSG +
Sbjct: 9 FKLPDLRRKLLFTLGILIIFRFVATIPVPGVDQQALKRLLETNQFLGVLNLFSGSTLTNF 68
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I +LG+ P+I A IV QLL + P+L +L K EG GR K+ QYT + +V A++QA G
Sbjct: 69 SIVALGVYPYITASIVMQLLTPVIPRLTELSK-EGALGRAKINQYTHWLTVPLALLQAYG 127
Query: 201 QVLYLRP--YVNDF----STDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+ + DF S W+ L + LT G+ F ++GE I++ +GNG S++I
Sbjct: 128 HAALMSSAGVLRDFGLFDSATWLRSLALLLTLTAGTVFLVWLGELITENGIGNGVSIIIL 187
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I++ LP+S R V N IG + +L+++GIV + E +R+IP+ +A R
Sbjct: 188 GGIVAQLPSSVARLVTGGTLSENLIGTVAFLAIGLLIIVGIVLITEGQRRIPVQHARRVR 247
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG---IAALKKAAVAL---- 365
Y+P KVNS+G++P+IF+ S L LPG +A F I L+ A +
Sbjct: 248 RGRVYGGGMTYIPLKVNSAGMIPLIFAISILLLPGMIANFLATSEITWLRDVANGIARVF 307
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
+P Y +++ F Y+YT + +++E L+RQGA IP +RPG++T +L VL
Sbjct: 308 DPNSLPYQIAYFVMVVAFTYFYTMILFQQQNIAETLQRQGAFIPGIRPGRATDEYLTKVL 367
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RI+++G++FL ++A P ++ + T +T + TS+LI+VG A DT R+++A+++ +
Sbjct: 368 MRITLIGALFLGVVAVLPYIVAKITGVTVLF-LSSTSLLIVVGVAIDTMRQLEAQLLMRN 426
Query: 486 YK 487
Y+
Sbjct: 427 YE 428
>gi|319783340|ref|YP_004142816.1| preprotein translocase subunit SecY [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169228|gb|ADV12766.1| preprotein translocase, SecY subunit [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 446
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 244/433 (56%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+++F F K L + +G L + RLG YIPL G+N +AF S
Sbjct: 4 AAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLEAL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A+VQA G + L V+D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLALVQAYGISVGLEGGNGIVSDPGMFFRISTVVTLVGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+IF+ I++ LP + T+ GL II ++V+ IV+ + A+
Sbjct: 183 GIGNGISLIIFSGIVAGLPHAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R++ I Y R +++LP K+N+SGV+P IF++S L LP T+A F+ L
Sbjct: 243 RRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATVAGFSQTTNLPA 302
Query: 361 AA----VALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
A +L G Y+ +I FF ++YT + +P D ++QLK+ IP RPG+
Sbjct: 303 WASTVLASLGHGQPLYMLFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G+++L ++ P + T + + G GTS+LI+V DT +
Sbjct: 363 TADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLG--GTSLLIVVSVTLDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+Q +I+ +Y+ +
Sbjct: 421 IQGHLIAHQYEGL 433
>gi|2500728|sp|Q59912.1|SECY_STRGB RecName: Full=Protein translocase subunit SecY
gi|1213241|emb|CAA65158.1| membrane translocase [Streptomyces galbus]
Length = 437
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 243/440 (55%), Gaps = 39/440 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVN--------REAFVGNLDQNSLLST 128
F F+ P L K L L + + R+G +IP+ GV+ REA GN L
Sbjct: 5 FARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREA-SGN---QGLFGL 60
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
++ FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRY 119
Query: 189 ASVGFAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
+V AI+Q G V R V D S +T V +T G+ ++GE
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+D +GNG S+L+F SI + P++ + G +I T+I +++V +V+V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQGTLAGGWIEFGTVIAVGLIMVALVVFV 239
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
++A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G
Sbjct: 240 EQAQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAGGN 299
Query: 357 ALKKAAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
+ K+ V N Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R
Sbjct: 300 SGWKSWVEQNLTKGDHPIYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRA 359
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVG 468
G+ TA +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG
Sbjct: 360 GRPTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFGASQNFPFGGTSILIIVG 414
Query: 469 CATDTARKVQAEIISQKYKN 488
+T +++++++ + Y+
Sbjct: 415 VGLETVKQIESQLQQRNYEG 434
>gi|359298568|ref|ZP_09184407.1| preprotein translocase subunit SecY [Haemophilus [parainfluenzae]
CCUG 13788]
gi|402305939|ref|ZP_10824993.1| preprotein translocase, SecY subunit [Haemophilus sputorum HK 2154]
gi|400375561|gb|EJP28457.1| preprotein translocase, SecY subunit [Haemophilus sputorum HK 2154]
Length = 441
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 249/419 (59%), Gaps = 17/419 (4%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELIKQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL I+P L +L K+EGEAGR+K+ +YTRY ++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAIHPPLAEL-KKEGEAGRRKISKYTRYGTLLLAFIQSIGV 134
Query: 202 VLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
+ L + + + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SIALPNMQSGLVVNPNMLFYITSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRS 315
LP++ G+T+ +A + G+ + ++I+ I + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPSTIGQTIEQA-RAGDLSPIVLLLIAVIAFAVTYFVVFVERGQRRIVVNYASRQQGRM 253
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-----TGIAALKKAAVALNPGGS 370
RS++LP KVN +GV+P IF++S + P ++ ++ G L + L PG
Sbjct: 254 MAPARSSHLPLKVNMAGVIPAIFASSVILFPASITQWFGQSSEGFEWLFDLSQLLQPGQP 313
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ + + FF ++YT +Q +P + ++ LK+ GA +P RPG+ T+ ++ V++R+++
Sbjct: 314 LYIVLFTMAVIFFAFFYTGMQYNPRETADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTL 373
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+G++++A + P I + F+ GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 374 IGALYIAFVCLVP-YIAISLWKVPFQ-LGGTSLLIVVVVIMDFIAQVQSHMMSLQYDSV 430
>gi|167855330|ref|ZP_02478098.1| preprotein translocase subunit SecY [Haemophilus parasuis 29755]
gi|219871576|ref|YP_002475951.1| preprotein translocase subunit SecY [Haemophilus parasuis SH0165]
gi|167853588|gb|EDS24834.1| preprotein translocase subunit SecY [Haemophilus parasuis 29755]
gi|219691780|gb|ACL33003.1| preprotein translocase subunit SecY [Haemophilus parasuis SH0165]
Length = 440
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 249/417 (59%), Gaps = 14/417 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLG 141
G L + L +LG L + R+G +IP+ G++ + Q +++ + FSGG + R
Sbjct: 16 GELKSRLLFVLGALIVFRIGSFIPVPGIDASVLSELVRQQQGTIIDMFNMFSGGALSRAS 75
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
I +LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ +YTRYA++ A +Q+IG
Sbjct: 76 IFALGIMPYISASIIIQLLTAVHPALAEL-KKEGEAGRRKISKYTRYATLLLAFIQSIGI 134
Query: 202 VL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
L L V + + + +TSV L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 135 SLALPNMLAGLVPNPNMLFYVTSVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVA 194
Query: 258 YLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP+ G+T+ ++ Q + + + L I + + +V+V+ +R+I +NYASR R
Sbjct: 195 DLPSVIGQTIEQSRQGEISLLVLLLIAVVAFAVTYFVVFVERGQRRIVVNYASRQQGRMM 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFY 372
R ++LP KVN +GV+P IF++S + P T+A++ G + L + L PG Y
Sbjct: 255 APARQSHLPLKVNMAGVIPAIFASSIILFPATIAQWFGTSEGFEWLFDLSQLLQPGQPLY 314
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + + FF ++YT +Q +P D ++ LK+ GA +P RPG+ T+ ++ V++R++++G
Sbjct: 315 IVLFTMAVIFFAFFYTGMQYNPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIG 374
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++++ + P +I ++ G GTS+LI+V D +VQ+ ++S +Y ++
Sbjct: 375 ALYITFVCLVPYIITSLWKVSFQLG--GTSLLIVVVVIMDFIAQVQSHLMSLQYDSV 429
>gi|384921241|ref|ZP_10021229.1| preprotein translocase subunit SecY [Citreicella sp. 357]
gi|384464875|gb|EIE49432.1| preprotein translocase subunit SecY [Citreicella sp. 357]
Length = 455
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 246/420 (58%), Gaps = 25/420 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG YIP+ G++ A ++Q + + F+GG +GR+G+
Sbjct: 23 LRNRILFTLGLLIVYRLGTYIPVPGIDGAALRQFMEQAGQGIGGMVSMFTGGALGRMGVF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L+ L K+EGE GRKK+ QYTRY +V A+ QA G +
Sbjct: 83 ALGIMPYISASIIVQLLGAMVPALEQL-KKEGEQGRKKMNQYTRYGTVFLALFQAYGLAV 141
Query: 204 YLRPYVNDFSTD--WVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D + D W + ++TL G+ F ++GE+I+ +GNG SL+IF I++ +
Sbjct: 142 SLE--AGDLAHDPGWYFRAAVVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEI 199
Query: 260 PASFGRTVAEAFQDGNYIGLATIII-----SFILLVLGIVYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ +I +++++ +V+++ A RKI I Y R
Sbjct: 200 PAA----LAQFFASGRSGAVSPAVILGAIVMVVVVIMFVVFMERALRKITIQYPRRQVGM 255
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAALKKAAVA-LNPGGS 370
+S++LP KVN +GV+P IF++S L LP T+A F+ G + + +A PG
Sbjct: 256 KMTEAQSSHLPVKVNPAGVIPAIFASSLLLLPTTIATFSQTGGTSPILSTILAYFGPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL +I FF Y+YTF + PDDV++ LK Q IP +RPGK TA L+ V++R+
Sbjct: 316 LYLLFFAAMIIFFAYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKRTAEHLEYVVNRVL 375
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
VLGS +LA++ P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 376 VLGSGYLALVCLFPEILRAQFAIPFY--FGGTSVLIVVSVTMDTVQQVQSHLLAHQYEGL 433
>gi|444378654|ref|ZP_21177849.1| Preprotein translocase secY subunit [Enterovibrio sp. AK16]
gi|443677270|gb|ELT83956.1| Preprotein translocase secY subunit [Enterovibrio sp. AK16]
Length = 441
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 246/416 (59%), Gaps = 16/416 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
L + L ++G L + R G ++P+ G++ A + +L Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVVGALLVFRAGSFVPIPGID-AAVLADLFEQQQGTIIELFNMFSGGALERASI 77
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 78 LALGIMPYISASIIVQLLTVVHPALAEL-KKEGESGRRKISQYTRYGTLVLATFQAIGIA 136
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L + + T+V L G+ F ++GE+I++ +GNG SL+IF I++
Sbjct: 137 TGLPSMIPGLVVTPGLGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAG 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAERKIPINYASRYTSRSGG 317
LP++ G+T +A Q ++ L +I V+ +V+V+ +R+I +NYA R R
Sbjct: 197 LPSAIGQTAEQARQGELHVLLLLLIAVIAFAVIAFVVFVERGQRRIVVNYAKRQQGRRVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
+S +LP K+N +GV+P IF++S + PGTLA++ G + L ++AL+PG Y+
Sbjct: 257 AAQSTHLPLKLNMAGVIPAIFASSIILFPGTLAQWFGQSEQLGWLADVSLALSPGQPLYV 316
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++ G+
Sbjct: 317 ILYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLAGA 376
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 377 LYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 430
>gi|126461155|ref|YP_001042269.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides ATCC
17029]
gi|429207712|ref|ZP_19198968.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
gi|126102819|gb|ABN75497.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides ATCC 17029]
gi|428189105|gb|EKX57661.1| Preprotein translocase secY subunit [Rhodobacter sp. AKP1]
Length = 452
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 231/410 (56%), Gaps = 22/410 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
+G L + RLG YIP+ G++ A +D + + L+ F+GG I R+GI +LGI+P+I
Sbjct: 31 IGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMGIFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QL+A + PKL+ L K+EGE GRKK+ QYTRY +V A QA G + L D
Sbjct: 91 SASIIVQLMASMVPKLEQL-KKEGEQGRKKINQYTRYGTVFLATFQAWGIAMSLE--AGD 147
Query: 212 FSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD + V L G+ F ++GE+I+ +GNG SL+IF I++ +PA + +
Sbjct: 148 LVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPAHLAQFL 207
Query: 268 AE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
++ A +G+ ++I+ I V V+++ A RKI I Y R S++
Sbjct: 208 SQGRSGAISPAVIVGVIAMVIAVITFV---VFMERALRKIHIQYPRRQVGMKVYDGGSSH 264
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---ALKKAAVALNPGGSFYLPTNILLI 380
LP KVN +GV+P IF++S L LP T++ F+G + PG YL +I
Sbjct: 265 LPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTILAYFGPGQPLYLLFFAGMI 324
Query: 381 AFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
FF Y+YT + DDV+E LK Q IP +RPGK T +L+ V++RI VLGS +LA +
Sbjct: 325 VFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYVVNRILVLGSAYLAAV 384
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 385 CLLPEILRNQLGIPFY--FGGTSVLIVVSVTMDTINQVQSHLLAHQYEGL 432
>gi|294497005|ref|YP_003560705.1| preprotein translocase subunit SecY [Bacillus megaterium QM B1551]
gi|384049249|ref|YP_005497266.1| preprotein translocase subunit SecY [Bacillus megaterium WSH-002]
gi|294346942|gb|ADE67271.1| preprotein translocase, SecY subunit [Bacillus megaterium QM B1551]
gi|345446940|gb|AEN91957.1| Preprotein translocase secY subunit [Bacillus megaterium WSH-002]
Length = 430
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 248/415 (59%), Gaps = 24/415 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
F LL L + R+G +IP+ VN + D ++ L++F GG + I ++GI+P
Sbjct: 19 FFTLL-MLIVFRIGTFIPVPSVNTDVLKLQ-DGLNVFGVLNTFGGGALKNFSILAMGIMP 76
Query: 150 FINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL--- 205
+I A I+ QLL + PK + K +G+ GR+K+ Q TRY ++ +QA+G +
Sbjct: 77 YITASIIVQLLQMDVVPKFTEWSK-QGDVGRRKLAQVTRYGTIVLGFIQALGMSIGFNNI 135
Query: 206 ---RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
+ N + ++L + T+LT G+AF ++GE+I+ +GNG S++IF I + +P +
Sbjct: 136 SGGQLIANPGISTYLLIA-TVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAAGIPTT 194
Query: 263 FGRTVAEAFQD-GN--YIGLATII---ISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+ A+ F+D G+ +I + T++ I+ + +++G++Y Q+A RKIPI YA R+
Sbjct: 195 LNQIYAQQFEDVGDQLFIRIVTVVLIAIAVLAIIVGVIYFQQALRKIPIQYAKGSAGRNP 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
+S +LP KVN++GV+P+IF+ S + P T+A F G ++ P G
Sbjct: 255 VGGQSTHLPLKVNAAGVIPVIFAVSFIITPPTIASFFGPNDVTTWIQNTFDYTKPIG--- 311
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + LI F Y+YTF+Q++P+ V+E LK+QG IP +RPGKST A+L VL R++++G
Sbjct: 312 MIVYVALIIAFCYFYTFVQVNPEQVAENLKKQGGYIPGIRPGKSTQAYLTKVLYRLTLIG 371
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
S+FLA++A P + + +L + GTS+LI+VG A +T ++++++++ + YK
Sbjct: 372 SIFLALIAVLPVLFIKIANLPSSAQIGGTSLLIVVGVALETMKQLESQLVKRHYK 426
>gi|383767972|ref|YP_005446955.1| preprotein translocase subunit SecY [Phycisphaera mikurensis NBRC
102666]
gi|381388242|dbj|BAM05058.1| preprotein translocase SecY subunit [Phycisphaera mikurensis NBRC
102666]
Length = 472
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 255/458 (55%), Gaps = 52/458 (11%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS------LLSTLD 130
F + +K P L K L + LA+ RLG +IPL GV++ A + +S L+S +
Sbjct: 4 FLNIWKIPELRNKLLFTIAMLAIYRLGSFIPLPGVDQAALAEWAENSSSGALGNLISFVA 63
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
F+GG +G+ I LGI+P+I+A I+FQLLA ++ KL+ LQK EG AGR+K+ +YTRYA+
Sbjct: 64 IFTGGNLGQSTIFGLGIMPYISAAIIFQLLASVSEKLKALQK-EGPAGRQKIQEYTRYAT 122
Query: 191 VGFAIVQAI-----------GQVLYLRP-YVNDFSTDWVLTSVTL-LTLGSAFTTYIGER 237
VG A+VQAI G + P Y++ + T L LT G+ F ++GE+
Sbjct: 123 VGLAVVQAIFWLKFMASSGAGSAPLIYPEYLSGLGSVIYWTCGLLALTAGTVFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ---DGNYIGLATII---ISFILLVL 291
I LGNG SL+I SI++ +P + G + + F DG Y G+ T+I +SFIL+
Sbjct: 183 IDKYGLGNGISLIITASIVASIPTAIG-MIYQGFSLRGDGQY-GIGTVIFLTMSFILVSA 240
Query: 292 GIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPG-TLA 350
G + + + +R+IPI R + +YLP +VN GVMPIIF++S + P L
Sbjct: 241 GAIIITQGQRRIPIQQGKEARGRRVYGGQKSYLPLRVNHGGVMPIIFASSLMIFPSLILN 300
Query: 351 RFTGIAALKKAAVAL----------------NPGGSFYLPTNILLIAFFNYYYTFLQLDP 394
FT +++ A L N G Y I LI FF Y++T +Q P
Sbjct: 301 WFTAYMPVEEGAGGLYNFFAGGLALFNDQFSNMTGVLYALIYIGLIYFFAYFWTTVQFQP 360
Query: 395 DDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI----EQTT 450
D+++EQL+ GA +P +RPG TA +L+TV+ RI+ +G+ FLA++A P ++ +
Sbjct: 361 DEMAEQLRNNGAFVPGLRPGPRTATYLETVMERITYVGAGFLAVIAVIPTIVAGIFDVPF 420
Query: 451 HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+T F G GT +LI + D ++++A+++ + Y+
Sbjct: 421 LVTQFLG--GTGLLITISVMLDFVQRIEAQLLMRNYQG 456
>gi|210631173|ref|ZP_03296784.1| hypothetical protein COLSTE_00669 [Collinsella stercoris DSM 13279]
gi|210160140|gb|EEA91111.1| preprotein translocase, SecY subunit [Collinsella stercoris DSM
13279]
Length = 428
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 248/428 (57%), Gaps = 31/428 (7%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAF------VGNLDQNSLLSTLDSFSGGGIGR 139
L GK L + L + R+G ++P+ G+ + G+ + ++ L+ FSGG +
Sbjct: 14 LRGKILFTIAMLVVYRIGAHVPVPGIPFQGMSALFTSAGDTFASGAMALLNLFSGGALSY 73
Query: 140 LGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
+ + SLGI+P+I + IV Q+L + P L +L REGE G+ K+ QY+RY ++ A++ ++
Sbjct: 74 VSVFSLGIMPYITSSIVMQMLQAVVPSLHEL-AREGEVGQTKITQYSRYLTLALALLNSV 132
Query: 200 GQVLYLRPYVNDFS------TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFT 253
G + + + F+ + + V LT G+ +IGE I+ +GNG SL+IF
Sbjct: 133 GYLFLFKSFGIQFTGAEAPEVIFDIMIVGTLTAGAMLIMWIGELITQRGIGNGMSLIIFA 192
Query: 254 SIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASR 310
+I++ LP + +++ DG + + T ++ ++++ IVY++ +R+IP+ YA R
Sbjct: 193 NIMAGLPQAIIQSM-----DGGSVAIITTLVVVLVILCVIPFIVYLERGQRRIPVQYAKR 247
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGG 369
R +S YLP KVN++GV+PIIF+++ L P LA F + ++ A AL+ G
Sbjct: 248 VVGRRIMGGQSTYLPIKVNTAGVVPIIFASALLYFPAQLAVFFPNVGWMQAFAGALSSGW 307
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ N++LI FF Y+YT + +PD+ +E LK+QG IP VRPGK TA ++K L++I+
Sbjct: 308 INWI-LNVVLIVFFAYFYTSMVFNPDETAENLKKQGGFIPGVRPGKQTAKYIKNALNKIT 366
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ +VFLA++A P+++ T+ + F GTSVLI+VG DT KV+++ +
Sbjct: 367 LPSAVFLALIAIVPSIVFSFTNNALIQAFGGTSVLIMVGVVLDTIDKVESQ--------L 418
Query: 490 EFYDIDSY 497
+ YD D +
Sbjct: 419 KMYDYDGF 426
>gi|387823828|ref|YP_005823299.1| preprotein translocase subunit SecY [Francisella cf. novicida 3523]
gi|328675427|gb|AEB28102.1| Preprotein translocase secY subunit [Francisella cf. novicida 3523]
Length = 441
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 254/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELRSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|326203876|ref|ZP_08193738.1| preprotein translocase, SecY subunit [Clostridium papyrosolvens DSM
2782]
gi|325985974|gb|EGD46808.1| preprotein translocase, SecY subunit [Clostridium papyrosolvens DSM
2782]
Length = 430
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 231/403 (57%), Gaps = 24/403 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
RLG IP+ G+N + F + + L + +D GG I ++ I P+INA I+ QL
Sbjct: 32 RLGSRIPVPGLNPDWFAQLISKGGQLFNFIDIIGGGSFKNATIFAMSITPYINASIIMQL 91
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-PYVNDFSTDWVL 218
L PKL+ L K EGE GRKK+ Q+ RYA+V A +QA + LR ++ + +
Sbjct: 92 LTIAIPKLEQLSK-EGEEGRKKIGQWIRYATVILAFLQATAITIGLRGALISGLNVITFI 150
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY-- 276
T LT G+AF ++GE+I++ +GNG S+LIF I+S P + + + GN
Sbjct: 151 TVTLTLTAGTAFLMWLGEQITEYGIGNGISMLIFAGILSAGPTG-ANYIIKNYTLGNLGN 209
Query: 277 -----IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
+ + I++ F+ ++ +V+V +AER+IP+ YA R R +S +LP KVN +
Sbjct: 210 GAVGILAILGILLVFVGVITCVVWVNQAERRIPVQYAKRVVGRKVYGGQSTHLPIKVNWA 269
Query: 332 GVMPIIFSTSSLALPGTLARF------TGIAALKKAAVALNPGGSF-YLPTNILLIAFFN 384
GV+PIIF+ S + LP T+ F +G+A K N G + Y LLI F
Sbjct: 270 GVIPIIFAMSIMMLPSTIVGFARPNATSGVAGFIK-----NWSGHWSYAILYALLIIGFT 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT++Q +P +++ +K+ G IP +RPGK T+ ++ VL+RI+ G++FLA++ P
Sbjct: 325 FFYTYVQFNPIELANNMKKNGGFIPGIRPGKPTSEYIAKVLNRITWFGALFLALITIFPY 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+I T + FAGTSVLILVG A DT R+++++++ + YK
Sbjct: 385 IIGWITGVQGVW-FAGTSVLILVGVAIDTVRQIESQMLMRHYK 426
>gi|91200686|emb|CAJ73737.1| strongly similar to preprotein translocase SecY subunit [Candidatus
Kuenenia stuttgartiensis]
Length = 460
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 245/455 (53%), Gaps = 58/455 (12%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS------LLSTL 129
FG+ F+ P L K L LG +AL R+G+Y+P+ G++ +Q S LL +
Sbjct: 4 QFGNVFRIPELRKKVLITLGLIALCRVGVYLPIPGIDTTVLKSYFNQFSQSGIGQLLGMV 63
Query: 130 DSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYA 189
D F+GG + I LG++P+I+A I+FQLL + P L+ LQK EGE GRKK+ QYTR A
Sbjct: 64 DMFAGGAMSSGAIFGLGVMPYISASIIFQLLVGVVPYLERLQK-EGEVGRKKINQYTRIA 122
Query: 190 SVGFAIVQAIGQVLYLRPYVNDFS-----------TDWVLTSVTLLTLGSAFTTYIGERI 238
+VG + QA V+ Y +F+ + L + LLT G+ +IGE+I
Sbjct: 123 TVGLCLFQAF--VMTRTLYTVEFNGVPVIPVYLQGVSFQLMAAILLTTGTMILMWIGEQI 180
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGR-------TVAEAFQDGNYIGLATIIISFILLVL 291
+ +G+G S++I II LP +F + +VA A + L ++ F +V
Sbjct: 181 EEHGIGSGISIVIMVGIIERLPWAFNQIVQNFTFSVAPAEHQIGIVKLLILLGMFFAIVG 240
Query: 292 GIVYVQEAERKIPINYASRYTSRS--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL 349
G+VY+ + +R+IPI A R GG QR +LP +VN +GVMPIIF+ S L P
Sbjct: 241 GVVYITQGQRRIPIQQAKHTRGRRVYGG-QRH-FLPLRVNQAGVMPIIFAQSLLIFPA-- 296
Query: 350 ARFTGIAALKKAAVALNPG----------------GSFYLPTNILLIAFFNYYYTFLQLD 393
A ++ + PG G Y+ ILLI FF Y++T +Q +
Sbjct: 297 ------AIMQGIQIRFEPGSVGYWITSRLSGILQEGVLYVMLYILLITFFCYFWTAIQFN 350
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
P ++S +K G+ IP +RPG TA +L++++ +I++ G+ FL+++A P ++ L
Sbjct: 351 PREMSNNMKDYGSFIPGIRPGHRTAEYLESIMGKITLAGAAFLSLIAILPKLVAGGFELN 410
Query: 454 -AFRGF-AGTSVLILVGCATDTARKVQAEIISQKY 486
A GF GT +LI+VG A D +++++ +I ++Y
Sbjct: 411 RAIAGFYGGTGLLIIVGVALDMVQRIESHMIMRQY 445
>gi|292669838|ref|ZP_06603264.1| preprotein translocase [Selenomonas noxia ATCC 43541]
gi|422343323|ref|ZP_16424251.1| preprotein translocase, SecY subunit [Selenomonas noxia F0398]
gi|292648635|gb|EFF66607.1| preprotein translocase [Selenomonas noxia ATCC 43541]
gi|355378630|gb|EHG25810.1| preprotein translocase, SecY subunit [Selenomonas noxia F0398]
Length = 418
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 235/412 (57%), Gaps = 6/412 (1%)
Query: 79 GDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI 137
G+ F+ P L K + L A+ R+G +IP+ GV+ A Q +L LD FSGG
Sbjct: 6 GNIFQIPELRQKIVFTLIMFAVFRMGTHIPVPGVDPTAIEQLFAQGTLFGLLDLFSGGAF 65
Query: 138 GRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
+ + ++ I P+INA I+ QLL + P L+ K EG G+KK + TRY +V A Q
Sbjct: 66 SKFSVFAMSITPYINAAIIIQLLNVVVPTLEQWSK-EGAEGQKKTTKVTRYLTVALAFFQ 124
Query: 198 AIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
AIG + L+ + + + +L LT G+ F ++GE+I+ +GNG SL+IF I++
Sbjct: 125 AIGMSIGLKTAILNPNPVNILIIAITLTAGTVFLMWLGEQITANGVGNGISLIIFAGIVA 184
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP + G T+ + G +Y + + + +++ +++++ R++PI YA R
Sbjct: 185 ALPKNIG-TIYAYVKAGTISYFSVFAFAVIALAMIVFVIHIETGFRRVPITYAKRVVGGR 243
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
S+++PFKVN +GV+PIIF++S L P T+A+F I +K A L G
Sbjct: 244 MASGHSSHIPFKVNQAGVIPIIFASSVLMFPITVAQFIDIPWVKTVAAYLEWGKPLQTTL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ +I FF Y+YT + + D+++ LK+ G +P +RPG++TA +L VL+RI++ G+ F
Sbjct: 304 YVFMIIFFTYFYTSVTVKIPDMADNLKKYGGFVPGLRPGQATADYLDYVLTRITLAGAFF 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
LA +A P ++ T++ F GT++LI+VG A T +++++ ++ + Y+
Sbjct: 364 LAFIAVLPNLVASATNIQGVY-FGGTALLIVVGVALQTMKQIESMVVMRHYE 414
>gi|225873058|ref|YP_002754517.1| preprotein translocase subunit SecY [Acidobacterium capsulatum ATCC
51196]
gi|225793714|gb|ACO33804.1| preprotein translocase, SecY subunit [Acidobacterium capsulatum
ATCC 51196]
Length = 464
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 246/452 (54%), Gaps = 46/452 (10%)
Query: 77 DFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNR---EAFVGNLDQNSLLSTLDSF 132
F + FK P L + L +LG LA+ RLG +IP GVN E F N + S L +D F
Sbjct: 4 KFANIFKIPDLRNRVLFMLGMLAIYRLGAFIPTPGVNWHVIEQFF-NSNSGSSLGLVDLF 62
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + R+ I +LGI+P+I A I+FQLL + L+ +Q EGE GRKK+ Q+TRY +V
Sbjct: 63 SGGNLRRMTIFALGIMPYITASIIFQLLTVVYEPLKKMQN-EGEMGRKKITQWTRYMTVI 121
Query: 193 FAIVQAIGQVLYL------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+VQ+ L L + V D +VL ++ LT G+ F ++GE+I++ +GNG
Sbjct: 122 LGVVQSTAIALALLHGSTGQQLVLDPGIGFVLMTILTLTTGTTFVMWLGEQITERGIGNG 181
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV-------QEA 299
SLLIF II LPA V A +D + A + + ILLV G+V V + +
Sbjct: 182 MSLLIFAGIIVGLPAGIADIVNTA-RDHKF--GAFTVPALILLVAGMVAVVAFIVFVERS 238
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI---A 356
ER+IP+ YA R R +S +LP +VNS GVMPIIF+ S L+ P + + +
Sbjct: 239 ERRIPVQYAKRIVGRRLMGGQSTHLPLRVNSGGVMPIIFAASVLSAPLLFSHAAFVRNSS 298
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
L A AL PG +Y I FF Y+Y + PDD+++ +++ G IP +RPGK
Sbjct: 299 VLNSIATALAPGEPWYEFLYFASIIFFAYFYISIVFRPDDIADNMRKYGGFIPGIRPGKR 358
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-------------------- 456
T+ F+ +L+RI+++G+++L I+A P + HL
Sbjct: 359 TSDFVNDILTRITLIGAIYLCIVAIIPQFLITGIHLNHLPLIGSWFEHAPLWVTNGLGFS 418
Query: 457 -GFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GTS+LI+VG A DT ++++++I + Y+
Sbjct: 419 FYFGGTSLLIVVGVAMDTVNQIESQLIMRHYE 450
>gi|221638133|ref|YP_002524395.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides KD131]
gi|221158914|gb|ACL99893.1| Preprotein translocase secY subunit [Rhodobacter sphaeroides KD131]
Length = 445
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 231/410 (56%), Gaps = 22/410 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
+G L + RLG YIP+ G++ A +D + + L+ F+GG I R+GI +LGI+P+I
Sbjct: 24 IGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMGIFALGIMPYI 83
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QL+A + PKL+ L K+EGE GRKK+ QYTRY +V A QA G + L D
Sbjct: 84 SASIIVQLMASMVPKLEQL-KKEGEQGRKKINQYTRYGTVFLATFQAWGIAMSLE--AGD 140
Query: 212 FSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD + V L G+ F ++GE+I+ +GNG SL+IF I++ +PA + +
Sbjct: 141 LVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPAHLAQFL 200
Query: 268 AE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
++ A +G+ ++I+ I V V+++ A RKI I Y R S++
Sbjct: 201 SQGRSGAISPAVIVGVIAMVIAVITFV---VFMERALRKIHIQYPRRQVGMKVYDGGSSH 257
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---ALKKAAVALNPGGSFYLPTNILLI 380
LP KVN +GV+P IF++S L LP T++ F+G + PG YL +I
Sbjct: 258 LPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTILAYFGPGQPLYLLFFAGMI 317
Query: 381 AFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
FF Y+YT + DDV+E LK Q IP +RPGK T +L+ V++RI VLGS +LA +
Sbjct: 318 VFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYVVNRILVLGSAYLAAV 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 378 CLLPEILRNQLGIPFY--FGGTSVLIVVSVTMDTINQVQSHLLAHQYEGL 425
>gi|433609639|ref|YP_007042008.1| Preprotein translocase subunit secY [Saccharothrix espanaensis DSM
44229]
gi|407887492|emb|CCH35135.1| Preprotein translocase subunit secY [Saccharothrix espanaensis DSM
44229]
Length = 440
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 240/422 (56%), Gaps = 29/422 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV---NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
K L LG + + RLG +P GV N + ++DQ + S ++ FSGG + L I +L
Sbjct: 21 KILFTLGIIVVYRLGATMPAPGVSFKNVRQCIDSVDQQGIYSLINLFSGGALLNLSIFAL 80
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-LY 204
GI+P+I A I+ QLL + P+ + L K+EG+AG+ K+ QYTRY ++ A++Q+ G + L
Sbjct: 81 GIMPYITASIIIQLLTVVIPRFEQL-KKEGQAGQGKLTQYTRYLTIALAVLQSTGIIALA 139
Query: 205 LR---------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+R P + D S ++ V +T G++ ++GE I++ +GNG SLLIFT I
Sbjct: 140 VRGQLFANCEVPVIPDQSVWNLVVLVVTMTAGTSVIMWLGEIITEKGIGNGMSLLIFTGI 199
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
+ +PA + + + ++ +L++ ++YV++A+R+IP+ YA R R
Sbjct: 200 AARIPAE-----GQIIWSRGGLTFFLVCVAALLIIASVIYVEQAQRRIPVQYAKRMIGRR 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT--------GIAALKKAAVALNP 367
S YLP KVN +GV+P+IF++S L LP ++R T G A A ++
Sbjct: 255 MYGGTSTYLPLKVNQAGVIPVIFASSLLYLPDLVSRLTASTDGSAPGWFATFVATHLVSQ 314
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
++ LLI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L+ VL R
Sbjct: 315 SSPVHIALYFLLIVFFTYFYVGITFNPDERADEMKKFGGFIPGIRPGRPTAEYLRFVLGR 374
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAEIISQK 485
I++ GS++L I+A P T + F GT+VLI+VG DT ++++++++ +
Sbjct: 375 ITLPGSIYLGIVAILPNFFLDITDQGQNQNFPFGGTAVLIMVGVGLDTVKQIESQLMQRN 434
Query: 486 YK 487
Y+
Sbjct: 435 YE 436
>gi|367470178|ref|ZP_09469894.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
gi|365814756|gb|EHN09938.1| Preprotein translocase secY subunit (TC 3.A.5.1.1) [Patulibacter
sp. I11]
Length = 425
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 237/409 (57%), Gaps = 30/409 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSL-----LSTLDSFSGGGIGRLGICSLGIVPFI 151
LAL R+G IP+ GV+ E + S L L+ FSGG + ++ I +LGI+P+I
Sbjct: 25 LALYRIGAQIPVPGVSSEGVKALQESASFQGGGALQLLNVFSGGALSQIAIFALGIMPYI 84
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----- 206
A IV QLL + P L+ L K+EGE G++++ QYTRY +V A Q+I V +
Sbjct: 85 TASIVLQLLQVVVPSLEKL-KQEGEIGQQRITQYTRYLTVALAAGQSIAYVFLFKSLSGQ 143
Query: 207 ---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
P + +F+ V LT G+ ++GE I+ +GNG SL+IF SI+S LP+
Sbjct: 144 AGEPLITNFNAGHVFMIAVSLTAGAMIVMWMGELITQRGIGNGMSLMIFASIVSGLPSG- 202
Query: 264 GRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSR--SGGLQ 319
V+ +Q G+ + +++ F+ L + +V++QE +R+IPI YA R R SGG Q
Sbjct: 203 ---VSNWWQSGDQV--FKVLMPFLALAVIAAVVFIQEGQRRIPIQYAKRVIGRRMSGGGQ 257
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
YLP KVN + V+P+IF+ S +++P T+A+F GG Y+ +
Sbjct: 258 --TYLPLKVNMANVIPVIFAASIMSIPPTIAQFVTKDPSNSVQELFRAGGWAYIGGETIF 315
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+YT + +P + ++ LK+ G IP VRPG+ TA FL VL+R++ G+++LA +
Sbjct: 316 IILFTYFYTAVTFNPVEQADNLKKYGGFIPGVRPGRPTAEFLDRVLARLTFPGALYLAAV 375
Query: 440 AAGPAVI-EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
AA P+++ QTT A F GTS+LI+VG A DT ++++A+++ + Y+
Sbjct: 376 AALPSILFNQTTQGFA---FGGTSLLIVVGVALDTVKQIEAQLMMRNYE 421
>gi|357384693|ref|YP_004899417.1| preprotein translocase secY subunit [Pelagibacterium halotolerans
B2]
gi|351593330|gb|AEQ51667.1| preprotein translocase secY subunit [Pelagibacterium halotolerans
B2]
Length = 444
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 252/434 (58%), Gaps = 16/434 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NS 124
AA ++ F F K L + LG L + RLG YIP+ G++ +AF Q
Sbjct: 4 AAEQLARNLSFSTFSKAKELQKRIFFTLGALLVYRLGTYIPIPGIDPDAFAQTFQQAQGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+ + F+GG + RL I +L ++P+I A IV Q+++ +P+L+ L K+EGE+GR+K+ Q
Sbjct: 64 IFGLFNMFAGGAVERLAIFALNLIPYITASIVIQVMSTASPRLEAL-KKEGESGRRKLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V F VQA G + L V D + +++V L G+ F ++GE+++
Sbjct: 123 YTRYLTVVFCAVQAYGIAVGLEASEGVVADPGWFFRISTVITLVGGTMFLMWLGEQMTAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY--IGLATIIISFILLVLGIVYVQEA 299
+GNG SL+IF I++ LPA+ +T+ E + G I + I+I I+++ IV+ + A
Sbjct: 183 GVGNGISLIIFAGIVASLPATIAQTL-ELSRTGALPTIAVVGILIGAIVVIGIIVFFERA 241
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-- 357
+R++ I Y R +++LP K+N++GV+P+IFS+S L LP T+A F+
Sbjct: 242 QRRLLIQYPKRQVGNKMYQGDTSHLPLKLNTAGVIPVIFSSSLLLLPATIATFSAQGDAP 301
Query: 358 --LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGK 415
L+ + L G YL +I FF ++YT + +P + ++ LKR G IP +RPG+
Sbjct: 302 QWLQYISALLGRGQPLYLALFAGMIIFFAFFYTSIVFNPTETADNLKRSGGFIPGIRPGE 361
Query: 416 STAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTAR 475
TA + VL+RI+V+G+++L I+A P V +++AF G GTS+LI+V DT
Sbjct: 362 RTAQHIDYVLTRITVVGAIYLTIVALIPEVFLSQLNISAFLG--GTSLLIMVTVTLDTVS 419
Query: 476 KVQAEIISQKYKNI 489
++Q+ +I+Q+Y+ +
Sbjct: 420 QIQSHLIAQQYEGM 433
>gi|416051263|ref|ZP_11577361.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993281|gb|EGY34655.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 441
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 248/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I + + + +V+V+ +R+I + YA R R G
Sbjct: 198 PAAIGQTIEQARLGQMHLLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGRQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSILLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 376 GLYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|182436607|ref|YP_001824326.1| preprotein translocase subunit SecY [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326777229|ref|ZP_08236494.1| preprotein translocase, SecY subunit [Streptomyces griseus
XylebKG-1]
gi|178465123|dbj|BAG19643.1| putative preprotein translocase SecY [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657562|gb|EGE42408.1| preprotein translocase, SecY subunit [Streptomyces griseus
XylebKG-1]
Length = 437
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 237/436 (54%), Gaps = 31/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ---NSLLSTLDSFS 133
F FK P L K L LG + + RLG +IP GV+ +DQ LL + FS
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVAL 123
Query: 194 AIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
AI+Q G V R V D S + V +T G+A ++GE I+D
Sbjct: 124 AILQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTAAVMWLGELITDR 183
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAER 301
+GNG S+L+F SI + P + +I T+I+ ++V +V+V++A+R
Sbjct: 184 GIGNGMSILMFISIAATFPGALWAIKESGKLADGWIEFGTVILIGFVMVALVVFVEQAQR 243
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSQAGWAT 303
Query: 362 AVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
+ N +Y+ T +LI FF ++Y + +PD+V++ +K+ G IP +R G+ TA
Sbjct: 304 WIQDNFVTGDHPYYIATYFVLIVFFAFFYVAISFNPDEVADNMKKYGGFIPGIRAGRPTA 363
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCATD 472
+L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG +
Sbjct: 364 EYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYKN 488
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYEG 434
>gi|376259822|ref|YP_005146542.1| preprotein translocase subunit SecY [Clostridium sp. BNL1100]
gi|373943816|gb|AEY64737.1| preprotein translocase, SecY subunit [Clostridium sp. BNL1100]
Length = 430
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 229/403 (56%), Gaps = 24/403 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
RLG IP+ G+N + F + + L + +D GG I ++ I P+INA I+ QL
Sbjct: 32 RLGSRIPVPGLNPDWFAQLISKGGQLFNFIDIIGGGSFKNATIFAMSITPYINASIIMQL 91
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-PYVNDFSTDWVL 218
L PKL+ L K EGE GRKK+ Q+ RYA+V A +QA + LR ++ + +
Sbjct: 92 LTIAIPKLEQLSK-EGEEGRKKIGQWIRYATVILAFLQATAITIGLRGALISGLNVITFI 150
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY-- 276
T LT G+AF ++GE+I++ +GNG S+LIF I+S P + + + GN
Sbjct: 151 TVTLTLTAGTAFLMWLGEQITEYGIGNGISMLIFAGILSAGPTG-ANYIIKNYTLGNLGS 209
Query: 277 -----IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
+ + I++ F+ ++ +V+V +AER+IP+ YA R R +S +LP KVN +
Sbjct: 210 GAIGILAILGILVVFVAVITCVVWVNQAERRIPVQYAKRVVGRKVYGGQSTHLPIKVNWA 269
Query: 332 GVMPIIFSTSSLALPGTLARFT------GIAALKKAAVALNPGGSF-YLPTNILLIAFFN 384
GV+PIIF+ S + LP T+ F G A K N G + Y LLI F
Sbjct: 270 GVIPIIFAMSIMMLPSTIVGFARPNATGGFAGFIK-----NWSGHWSYAILYALLIIGFT 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT++Q +P +++ +K+ G IP +RPGK T+ ++ VL+RI+ G++FLA++ P
Sbjct: 325 FFYTYVQFNPIELANNMKKNGGFIPGIRPGKPTSEYIAKVLNRITWFGALFLALITIFPY 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+I T + FAGTSVLILVG A DT R+++++++ + YK
Sbjct: 385 IIGWITGVQGVW-FAGTSVLILVGVAIDTVRQIESQMLMRHYK 426
>gi|315633475|ref|ZP_07888765.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
gi|315477517|gb|EFU68259.1| preprotein translocase subunit SecY [Aggregatibacter segnis ATCC
33393]
Length = 441
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 250/419 (59%), Gaps = 18/419 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
K L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KSELRSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
I +LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 76 SIFALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVG 134
Query: 201 QVL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I+
Sbjct: 135 ISTGLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIV 194
Query: 257 SYLPASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
+ LPA+ G+T+ +A +++ L I + ++ +V+V+ +R+I I YA R R
Sbjct: 195 AGLPAAVGQTIEQARLGQMHFLVLILIAVIVFVVTYFVVFVERGQRRIKIEYAKRQQGRQ 254
Query: 316 --GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGG 369
GG + +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG
Sbjct: 255 ILGG--HTTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQ 312
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++
Sbjct: 313 PLYLIVYATAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLT 372
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++G +++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S KY++
Sbjct: 373 LIGGLYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTKYES 429
>gi|254368641|ref|ZP_04984656.1| preprotein translocase SecY [Francisella tularensis subsp.
holarctica FSC022]
gi|157121549|gb|EDO65734.1| preprotein translocase SecY [Francisella tularensis subsp.
holarctica FSC022]
Length = 441
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 254/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + L ++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMALFYLATIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + ++ L A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L L+P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|313891550|ref|ZP_07825160.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|329121848|ref|ZP_08250463.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
gi|313120009|gb|EFR43191.1| preprotein translocase, SecY subunit [Dialister microaerophilus
UPII 345-E]
gi|327467786|gb|EGF13278.1| preprotein translocase subunit SecY [Dialister micraerophilus DSM
19965]
Length = 420
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 223/394 (56%), Gaps = 13/394 (3%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLG++IP+ GV+ ++ LD FSGG + + + ++ I P+IN+ I+ QLL
Sbjct: 29 RLGVHIPVPGVDSSVIESLFTSGNIFGFLDLFSGGALSKFSLFAMSITPYINSSIIMQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW--VL 218
+ P L++ QK +G+ G KK+ + TRY +V A +QA G LR W +
Sbjct: 89 TAVIPTLEEWQK-DGQEGYKKIQKVTRYFTVVLAFIQAFGMAYALRANNALLDNSWFFLF 147
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG 278
V +LT G+ +IGE+I++ +GNG SL+IF I++ P + T+ + + G
Sbjct: 148 FIVIVLTAGTCLLVWIGEQITEKGIGNGISLIIFCGIVARFPEA-ASTIVDYLKVGTITP 206
Query: 279 LATIIISFI--LLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPI 336
L ++ I ++L ++ V EA+R+IP+ YA R R S +LP KVN +GV+PI
Sbjct: 207 LQALLFVVIGLAMILVVIAVNEAQRRIPVQYAKRVVGRKMYGGHSTFLPLKVNQAGVIPI 266
Query: 337 IFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNIL---LIAFFNYYYTFLQLD 393
IF++S + +P TLA+F I +K A G P IL LI F Y+YT + ++
Sbjct: 267 IFASSIIMMPVTLAQFVHINWVKSLATLFGWGT---WPNTILYGILIFMFTYFYTAITVN 323
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
D+++ +K+ G IP +RPG+ T ++ VL+RI++ G++FLA +A P I T +
Sbjct: 324 VKDLADNMKKYGGFIPGIRPGEPTMMYIDKVLTRITLTGAIFLAFVAILPNFIGNITGIQ 383
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
F GT++LI+VG A +T R+ Q+ ++++ Y+
Sbjct: 384 GVY-FGGTALLIVVGVALETMRQAQSLMVTRNYR 416
>gi|430376159|ref|ZP_19430562.1| preprotein translocase subunit SecY [Moraxella macacae 0408225]
gi|429541390|gb|ELA09418.1| preprotein translocase subunit SecY [Moraxella macacae 0408225]
Length = 444
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 241/414 (58%), Gaps = 17/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVG--NLDQNSLLSTLDSFSGGGIGRLGICSLG 146
+ L LLG L + R G ++P+ G+N ++ ++N++L + FSGG + R+ + +LG
Sbjct: 23 RLLFLLGALVVYRFGSHVPIPGMNPDSLANFFQTNENTILGLFNMFSGGALERMSVMALG 82
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I+A I+ Q++ + P L D K+EG+AG++++ +YTR ++ A VQA+G L
Sbjct: 83 IMPYISASIIVQMMTAVIPSL-DALKKEGQAGQRQINKYTRQLTLLLAFVQAVGMCTGLI 141
Query: 207 PYVNDFST--DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
S+ + + +VT L GS F ++GE+I++ +GNG S+LI I++ P
Sbjct: 142 SQNLTLSSGMTFYVPAVTSLVAGSMFLMWLGEQITERGIGNGISMLILAGIVATFPTVIT 201
Query: 265 RTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS-RSGGLQRSA 322
+++ Q N I L + + +V IV+++ A+R+IP+NYA + R Q+ +
Sbjct: 202 QSITSVQQGQMNMIALFIFAMLALAVVAAIVFIERAQRRIPVNYAQKQQQGRKIYAQQQS 261
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVALNPGGSFYLP 374
+LP K+N +GV+P IF++S L P +L ++ G +A L+ A+ L+PG YL
Sbjct: 262 HLPLKINMAGVIPAIFASSLLLFPASLGQWVGYSANPNMFQTFLQNMALVLSPGQPLYLV 321
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
LI FF Y+YT L P +V+E LK+ GA IP +RPG+ T +L VL+R++ +G++
Sbjct: 322 VFGALIIFFCYFYTALVFSPKEVAENLKKSGAYIPGIRPGQQTQRYLDHVLNRLTFIGAI 381
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
++ I+ P ++ Q+ F+ GTSVLI V D +V+A +++ +Y +
Sbjct: 382 YMTIICLMPMIL-QSAFGIPFQ-LGGTSVLISVVVIMDFIAQVKAHLMTHQYHD 433
>gi|431792489|ref|YP_007219394.1| protein translocase subunit SecY [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782715|gb|AGA67998.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 429
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 231/401 (57%), Gaps = 19/401 (4%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G +IP+ +N + L +L LD+FSGG R + +L I P+I A I+ QLL
Sbjct: 30 RIGAHIPIPYINHDVLSQMLGTGTLYDFLDTFSGGSFRRFSVFALSITPYITASIILQLL 89
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDFSTDWV- 217
+ P L+ L K EGE GRKK+ QYTRY +V VQ G LR + +W
Sbjct: 90 TIVIPYLERLAK-EGEYGRKKITQYTRYGTVILGFVQGFGMTFGLRGALVIPQPGMEWAI 148
Query: 218 -LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG-- 274
L +LT G+AF ++GERI++ +GNG SL+IF I++ +P + + +A + G
Sbjct: 149 YLLVALILTAGTAFLMWLGERITENGIGNGISLIIFAGIVAGVPDAI-KYIAGLLKVGEI 207
Query: 275 NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVM 334
N + + +++ ++ G+V++QE +R+I + YA R R +S+++P KVN +GV+
Sbjct: 208 NALSVLGLVVIGAAIIAGVVFIQEGQRRIQVQYAKRVVGRRTYGGQSSHIPMKVNQAGVI 267
Query: 335 PIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF----YLPTNILLIAFFNYY 386
PIIF+ S LA P T+A + +G +N GS YL T +LI FF Y+
Sbjct: 268 PIIFAISLLAFPSTIATWMPATSGYVQFVNKWFVMN--GSLTSIPYLFTYAVLIIFFTYF 325
Query: 387 YTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVI 446
YT + +P DV++ LK+ G IP +RPG++TA +L +LSR+++ G FLA++A P++I
Sbjct: 326 YTAVSFNPVDVADNLKKYGGFIPGLRPGRATADYLTKILSRLTLAGGTFLALIAVLPSLI 385
Query: 447 EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
T + GTS+LI+V A +T +++++ ++ + Y+
Sbjct: 386 IGLTGIQNIS-LGGTSLLIVVSVALETMKQLESMLMQRHYQ 425
>gi|15837774|ref|NP_298462.1| preprotein translocase subunit SecY [Xylella fastidiosa 9a5c]
gi|9106138|gb|AAF83982.1|AE003951_7 preprotein translocase SecY subunit [Xylella fastidiosa 9a5c]
Length = 457
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 246/426 (57%), Gaps = 24/426 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGIC 143
L + L L G L + R+G Y+P+ GVN EA + + + ++ + FSGG + R I
Sbjct: 19 LRHRLLFLFGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMFSGGALHRFSIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+L ++P+I+A IV QL I P L+ +QK EGE+GR+K+ QY+R +V A++Q L
Sbjct: 79 ALNVMPYISASIVVQLATHIFPSLKAMQK-EGESGRRKITQYSRIGAVILAVIQGGSIAL 137
Query: 204 YLR--------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
L+ V +V+T++ LT G+ F ++GE++++ +GNG S++IF I
Sbjct: 138 ALQNQTAPGGAAVVYAPGAAFVMTAIVALTAGTVFLMWVGEQVTERGIGNGVSMIIFAGI 197
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILL--VLGIVYVQEAERKIPINYASRYTS 313
++ LP S + + +AF+ ++ +II FI+L +V+V+ R+I +NYA R
Sbjct: 198 VAGLPGSVLQII-DAFRSDALSLISLLIIVFIVLSFTFFVVFVERGLRRITVNYARRVEG 256
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--------LKKAAVAL 365
R+ + +S++LP K+N +GV+P IF++S LA P TL+ ++G A+ L++ + AL
Sbjct: 257 RNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTVFGAWLQRVSSAL 316
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PG ++ +LI F ++YT L + ++ LK+ GA IP +RPGK+T+ ++ VL
Sbjct: 317 GPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPGKATSDYVDGVL 376
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
+R++ +GS++L I+ P ++ + + A F GTS+LI V D ++Q S +
Sbjct: 377 TRLTAVGSLYLVIVCLLPEFMQ--SRMGASFHFGGTSLLIAVVVVMDFISQIQVHQASNQ 434
Query: 486 YKNIEF 491
Y + F
Sbjct: 435 YDGVGF 440
>gi|226942798|ref|YP_002797871.1| Sec-dependent preprotein translocase, SecY subunit [Azotobacter
vinelandii DJ]
gi|226717725|gb|ACO76896.1| Sec-dependent preprotein translocase, SecY subunit [Azotobacter
vinelandii DJ]
Length = 395
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 234/380 (61%), Gaps = 18/380 (4%)
Query: 121 DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRK 180
++ ++LS + FSGG + R+ I +LGI+P+I+A I+ QL+ ++P+L+ L K+EGEAGR+
Sbjct: 8 NEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQLMTVVSPQLEQL-KKEGEAGRR 66
Query: 181 KVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDW--VLTSVTLLTLGSAFTTYIGERI 238
K+ QYTRY ++ AIVQA G + L F+ D+ +V+ G+ F ++GE+I
Sbjct: 67 KISQYTRYGTLVLAIVQAFGMSVGLASQGVAFAADFGFYFVAVSTFVAGAMFMMWLGEQI 126
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQ 297
++ +GNG S+LIF I++ LPA+ G++ A Q D N I L + + + ++ +V+V+
Sbjct: 127 TERGVGNGISMLIFAGIVAGLPAAIGQSFESARQGDINIIALLAVALLAVAIIGFVVFVE 186
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----T 353
+R+I ++YA R R ++++LP KVN +GV+P IF++S L P +L +
Sbjct: 187 RGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSE 246
Query: 354 GIAALKKAAVALNPGGSFYLPTNILL----IAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
G+ L+ A A+ PG P NI+L I FF ++YT L +P DV+E LK+ GA IP
Sbjct: 247 GMGWLQDIAQAIAPGQ----PLNIILFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIP 302
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPG+ +A ++ VL+R+++ G++++ + P + ++ + G GTS+LI+V
Sbjct: 303 GIRPGEQSARYIDGVLTRLTIFGALYMTAVCLLPQFLVVAANVPFYLG--GTSLLIVVVV 360
Query: 470 ATDTARKVQAEIISQKYKNI 489
D +VQ+ ++S +Y+++
Sbjct: 361 VMDFMSQVQSHLVSHQYESL 380
>gi|127511112|ref|YP_001092309.1| preprotein translocase subunit SecY [Shewanella loihica PV-4]
gi|126636407|gb|ABO22050.1| protein translocase subunit secY/sec61 alpha [Shewanella loihica
PV-4]
Length = 446
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 242/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L ++G + + R G ++P+ G++ A + N + ++L + FSGG + R I
Sbjct: 18 LKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTILGMFNMFSGGALERASIF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GRKK+ QYTRY ++ QAIG
Sbjct: 78 ALGIMPYISASIIMQLLTVVHPALAEL-KKEGESGRKKISQYTRYGTLVLGTFQAIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + +V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T +A Q D N + L I + + +V+V+ +R+I +NYA R R
Sbjct: 197 PSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTYFVVFVERGQRRIVVNYAKRQQGRKVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGTLA++ G++ L ++A++PG Y
Sbjct: 257 AQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQNEGLSWLSDFSLAVSPGQPLYSL 316
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 317 LYATAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 376
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + + + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 YITFICLIPEFMLIAWKVQFY--FGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429
>gi|453051855|gb|EME99351.1| preprotein translocase subunit SecY [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 438
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 245/432 (56%), Gaps = 24/432 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + L RLG +P+ GVN + +DQ L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIMVLYRLGSQVPIPGVNYQNVQTCVDQAKSGQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LG++P+I A I+ QLL + P+L+ L K+EG++G+ K+ QYTRY ++
Sbjct: 65 SGGALLQITIFALGVMPYITASIILQLLTVVIPRLEAL-KKEGQSGQAKITQYTRYLTIA 123
Query: 193 FAIVQAIGQVLYLR--------PYVNDFSTDWVL----TSVTLLTLGSAFTTYIGERISD 240
A++Q G V R P +D + + T V +T G+A ++GE ++D
Sbjct: 124 LAVLQGTGLVAVARNGALFGNCPVASDIVPNHSIFTTITMVITMTAGTALIMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+FTSI + P++ + G ++ +I+ + +V +V+V++A+
Sbjct: 184 RGIGNGMSILMFTSIAAQFPSALWAIKLQGKLMGGWLEFGLVILCGLAMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT-----GI 355
R++P+ YA R R S Y+P KVN +GV+P+IF++S L +P L +FT G
Sbjct: 244 RRVPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALLVQFTDSKDAGW 303
Query: 356 AALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGK 415
A +A + + Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G+
Sbjct: 304 AQWIQANL-VKGDHPIYMVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGR 362
Query: 416 STAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTAR 475
TA +L VL+RI+ GS++L ++A P V T + F GTS+LI+VG +T +
Sbjct: 363 PTAEYLSYVLNRITWPGSLYLGVIALVPTVALVTLNANQNFPFGGTSILIIVGVGLETVK 422
Query: 476 KVQAEIISQKYK 487
++++++ + Y+
Sbjct: 423 QIESQLQQRNYE 434
>gi|395765144|ref|ZP_10445760.1| preprotein translocase, SecY subunit [Bartonella sp. DB5-6]
gi|395412997|gb|EJF79476.1| preprotein translocase, SecY subunit [Bartonella sp. DB5-6]
Length = 448
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N ++ + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDSLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALETGIGTGLQIVVEPGFMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ LP++F + + A + D + L I++ + ++ IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLIGIVLIAVSVIGIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ +L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G+V++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAVYIILVCLLPEFMISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|114767221|ref|ZP_01446086.1| preprotein translocase SecY [Pelagibaca bermudensis HTCC2601]
gi|114540631|gb|EAU43702.1| preprotein translocase SecY [Roseovarius sp. HTCC2601]
Length = 447
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 239/418 (57%), Gaps = 21/418 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 16 LRNRILFTLGLLIVYRLGTFIPVPGIDGGALRDFMEQAGQGIGGMVSMFTGGALGRMGIF 75
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA + P L+ L K+EGE GRKK+ QYTRY +V A+ QA G +
Sbjct: 76 ALGIMPYISASIIVQLLAAMVPALEQL-KKEGEQGRKKINQYTRYGTVLLALFQAYGLAV 134
Query: 204 YLRPYVNDFSTDWVLTSVTLLTL--GSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
L W + ++TL G+ F ++GE+I+ +GNG SL+IF I++ +PA
Sbjct: 135 SLEAGDLAHEAGWYFRAAVVITLVGGTMFLMWLGEQITARGVGNGISLIIFVGIVAEIPA 194
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLVLG-----IVYVQEAERKIPINYASRYTSRSG 316
+ +A+ F G ++ II +++++ +V+++ A RKI I Y R
Sbjct: 195 A----LAQFFASGRSGAMSPAIIVGVIVMVIAVIMFVVFMERALRKITIQYPRRQVGMKM 250
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFY 372
+ ++LP KVN +GV+P IF++S L LP T+A F+ + + PG Y
Sbjct: 251 TEAQQSHLPVKVNPAGVIPAIFASSLLLLPTTIATFSQAGSSGPVMSTILAYFGPGQPLY 310
Query: 373 LPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
L +I FF Y+YTF + PDDV++ LK Q IP +RPGK TA L+ V++RI V+
Sbjct: 311 LLFFAAMIVFFAYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKRTADHLEYVVNRILVV 370
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
GS +LA + P ++ + + F GTSVLI+V DT +++Q+ +++ +Y+ +
Sbjct: 371 GSAYLAAVCLLPEILRSQYAIPFY--FGGTSVLIVVSVTMDTIQQIQSHLLAHQYEGL 426
>gi|423712852|ref|ZP_17687150.1| preprotein translocase, SecY subunit [Bartonella washoensis
Sb944nv]
gi|395410548|gb|EJF77102.1| preprotein translocase, SecY subunit [Bartonella washoensis
Sb944nv]
Length = 448
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 248/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQFASNINFGTFSRATELKRRIWFTLAALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVARMAIFALGIMPYISASIIVQLLTSIIPSLETL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++S+ L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALETGIGTGLQIVVEPGFMFRVSSIITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IF I++ LP++F + + A + D + L I + + ++ IV+V
Sbjct: 183 ITSRGIGNGVSLIIFIGIVANLPSTFAQLLTAHSQADLSTFLLIAIFLIAVSVIAIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATVNNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ LL+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAVSYSLGHGQPLYMIVYALLMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + T + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISTLQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|418465566|ref|ZP_13036500.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755838|gb|EHK90000.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 441
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 248/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAVVLAHLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I + + + +V+V+ +R+I + YA R R G
Sbjct: 198 PAAIGQTIEQARLGQMHLLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGRQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSILLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 376 GLYVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|294142913|ref|YP_003558891.1| preprotein translocase subunit SecY [Shewanella violacea DSS12]
gi|293329382|dbj|BAJ04113.1| preprotein translocase, SecY subunit [Shewanella violacea DSS12]
Length = 446
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 242/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L ++G + + R G ++P+ G++ A + N + ++L + FSGG + R I
Sbjct: 18 LKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTILGMFNMFSGGALERASIF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE GRKK+ QYTRY ++ QAIG
Sbjct: 78 ALGIMPYISASIIMQLLTVVHPALAEL-KKEGETGRKKISQYTRYGTLVLGTFQAIGIAT 136
Query: 204 YLRPY----VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + +V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPNLIPGLVVNLGFSFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T +A Q D N + L I + + +V+V+ +R+I +NYA R R
Sbjct: 197 PSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTFLVVFVERGQRRIVVNYAKRQQGRKVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP KVN +GV+P IF++S + PGTLA++ G ++ L ++A++PG Y
Sbjct: 257 AQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQNESLSWLSDFSLAVSPGQPLYSL 316
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 317 LYASAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 376
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + T + + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 YITFICLIPEFMLITWKVQFY--FGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429
>gi|153209778|ref|ZP_01947506.1| preprotein translocase, SecY subunit [Coxiella burnetii 'MSU Goat
Q177']
gi|212218094|ref|YP_002304881.1| preprotein translocase subunit SecY [Coxiella burnetii CbuK_Q154]
gi|120575255|gb|EAX31879.1| preprotein translocase, SecY subunit [Coxiella burnetii 'MSU Goat
Q177']
gi|212012356|gb|ACJ19736.1| protein translocase subunit [Coxiella burnetii CbuK_Q154]
Length = 442
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 249/411 (60%), Gaps = 38/411 (9%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G YIP+ G++ R A + + + L + FSGG + R+ I +LG++P+I++ I+ Q
Sbjct: 33 RVGAYIPVPGLDPSRLAALFHQHETGFLGMFNMFSGGALSRMTIFALGVMPYISSSIIVQ 92
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVL 218
+ +QI+PK+Q L+K EGEAGR+K+ QYTRY +V +++Q + F T W++
Sbjct: 93 MYSQISPKMQALRK-EGEAGRRKINQYTRYGTVILSLLQ------------SAFMTKWLV 139
Query: 219 TS---------------VTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASF 263
+S VTL+T G+ F ++GE++++ +GNG SL+IF SI S PA+
Sbjct: 140 SSGTVINPNLGFYFTAIVTLVT-GTMFLMWLGEQMTERGVGNGISLIIFASIASRFPAAI 198
Query: 264 GRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
G+ + Q + + L +I +L+ L +V+ + A+R+I INYA R R +S+
Sbjct: 199 GQVFTQVRQGQMSVLILLLLIAVIVLVTLVVVFFERAQRRITINYAKRQQGRKLYAAQSS 258
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAVALNPGGSFYLPTNIL 378
+LP K+N +GV+P+IF+ S + PG +A+F G+ L ++AL+ G Y+ +
Sbjct: 259 HLPLKINMAGVIPVIFAQSIILFPGAVAKFMSSVKGLGWLNDVSLALSYGQPAYIVVFAI 318
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
+ FF+++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R++++GSV+LA+
Sbjct: 319 AVIFFSFFYTALVFNPKETADNLKKSGAFIPGIRPGEQTANYIDKVMTRLTLVGSVYLAL 378
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P + ++ + F GTS+LI+V D +VQA ++S +Y+++
Sbjct: 379 VALLPQFLILAWNVPFY--FGGTSLLIVVVVIMDFMAQVQAHLMSHQYESL 427
>gi|388259066|ref|ZP_10136240.1| preprotein translocase subunit SecY [Cellvibrio sp. BR]
gi|387937024|gb|EIK43581.1| preprotein translocase subunit SecY [Cellvibrio sp. BR]
Length = 384
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 233/382 (60%), Gaps = 14/382 (3%)
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
+ FSGG + R+ I +LGI+P+I+A I+ QLL + P L+ L K+EG+AGR+K+ QYTRY
Sbjct: 2 FNMFSGGALERMSILALGIMPYISASIIMQLLTAVTPSLEQL-KKEGDAGRRKINQYTRY 60
Query: 189 ASVGFAIVQAIGQVLYLRPYV--NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNG 246
+V A VQA+ + Y + S + +V L G+ F ++GE++++ +GNG
Sbjct: 61 FTVVLATVQALAMAVSFSSYAFGGEPSFSYYFIAVVSLVTGAVFMMWLGEQVTERGIGNG 120
Query: 247 TSLLIFTSIISYLPASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
S+LIF I++ +P++ G+ A Q D + I L I I I ++ +V ++ +R+I +
Sbjct: 121 ISMLIFAGIVAGMPSAIGQAFESARQGDLHIIALLIISILAIAVIWFVVRIERGQRRITV 180
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-------L 358
NYA R R G +S++LP K+N +GV+P IF++S L P ++A++ G L
Sbjct: 181 NYAKRQQGRQGYAAQSSHLPLKINMAGVIPAIFASSILLFPASIAQWFGQGGEGVVNEML 240
Query: 359 KKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
++ A+A+ PG Y+ LI FF ++YT L +P +V++ LK+ GA IP +RPG+ +A
Sbjct: 241 QELALAIGPGQPLYILFFAGLITFFCFFYTALMFNPKEVADNLKKSGAYIPGIRPGEHSA 300
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQ 478
++ +VL+R++V+G+++++ + P + T + + G GTS+LI+V D +VQ
Sbjct: 301 KYIDSVLTRLTVVGAIYMSAVCLLPEFLVVATGVPFYLG--GTSLLIVVVVVMDFMSQVQ 358
Query: 479 AEIISQKYKNI-EFYDIDSYGS 499
A ++S +Y+++ + ++ YGS
Sbjct: 359 AHLMSHQYESLMKKSNLKGYGS 380
>gi|345870994|ref|ZP_08822943.1| preprotein translocase, SecY subunit [Thiorhodococcus drewsii AZ1]
gi|343921148|gb|EGV31872.1| preprotein translocase, SecY subunit [Thiorhodococcus drewsii AZ1]
Length = 450
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 235/404 (58%), Gaps = 19/404 (4%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ GVN EA DQN S+L + FSGG + R + +LG++P+I+A I+ Q
Sbjct: 36 RIGTFIPVPGVNPEALAILFDQNQGSILGMFNMFSGGALKRASLFALGVMPYISASIIVQ 95
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-------PYVND 211
L+ + P+L+ L K+EGE+GR+K+ QYTRY +V A QA+G + L+ V+
Sbjct: 96 LMTSVVPQLEQL-KKEGESGRRKITQYTRYGTVFLATFQAVGISMALQSQTAGGSALVSH 154
Query: 212 FSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAF 271
+V T+ L G+ F ++GE+I++ +GNG S++IF+ I++ LPA+ G T+ E
Sbjct: 155 AGVGFVFTATVTLVTGTMFLMWLGEQITERGIGNGISMIIFSGIVAGLPAALGGTL-ELA 213
Query: 272 QDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVN 329
+ G LA + + + L + +V+V+ +R+I +NYA R R +S +LP K+N
Sbjct: 214 RTGEMNSLAVLALFAMALAVTAFVVFVERGQRRITVNYARRQQGRRMMQAQSTHLPLKLN 273
Query: 330 SSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNPGGSFYLPTNILLIAFFNY 385
+GV+P IF++S + PGTL ++ G + + L PG Y+ I FF +
Sbjct: 274 MAGVIPPIFASSIILFPGTLGQWFGSSENYRWIADITSKLAPGEPIYVILYSAAIIFFCF 333
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+YT L + + ++ LKR GA IP +RPG+ TA ++ V++R++ G++++ + P
Sbjct: 334 FYTALVFNAKETADNLKRSGAFIPGIRPGEQTARYIDGVMTRLTAAGAIYITAVCLLPEF 393
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ ++ + F GTS+LI+V D +VQA ++S +Y+ +
Sbjct: 394 LIVGYNVPFY--FGGTSLLIVVVVVMDFMAQVQAHLMSHQYEGL 435
>gi|269128496|ref|YP_003301866.1| preprotein translocase subunit SecY [Thermomonospora curvata DSM
43183]
gi|268313454|gb|ACY99828.1| preprotein translocase, SecY subunit [Thermomonospora curvata DSM
43183]
Length = 432
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 242/428 (56%), Gaps = 30/428 (7%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL------DQNSLLSTLDSFSG 134
F+ P L K L L + + R+G +P VN EA + DQ+ + +D FSG
Sbjct: 9 FRTPDLRKKLLFTLFIIVIFRIGSQLPTPNVNTEAIREAVESAREGDQSQIYGLVDLFSG 68
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + +L + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY ++G A
Sbjct: 69 GALLQLSVFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTNKITQYTRYLTIGLA 127
Query: 195 IVQAIGQV-------LYLRPYVND--FSTDW--VLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA G V L+ V D + TD ++T V ++T G++ ++GE I+D +
Sbjct: 128 ILQATGIVAMAATGNLFQGAAVGDVLYKTDLFSIITMVVVMTAGTSVIMWLGELITDRGI 187
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG S+LIFT +++ PA F + A +++ + ++ G+V+V++A+R+I
Sbjct: 188 GNGMSILIFTQVVAVFPAQFW----AIYTSKGAFAFALVLVVGLAIMAGVVFVEQAQRRI 243
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
P+ YA R R S Y+P KVN +G++P+IF++S L LP LA T + K +
Sbjct: 244 PVQYAKRMVGRRMYGGTSTYIPLKVNQAGIIPVIFASSLLYLP-VLA--TQLWPENKWMI 300
Query: 364 ALNP----GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA 419
L P +++ I FF Y+Y + +P +V++ +K+ G IP +RPG+ TA
Sbjct: 301 KLQPYLQQDNPWHMAVFFGFIIFFTYFYVAITFNPTEVADNMKKYGGFIPGIRPGRPTAE 360
Query: 420 FLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQA 479
+L VL+RI+ G+++L +++ P V T F GTS+LI+VG DT +++++
Sbjct: 361 YLDYVLTRITTPGALYLGLVSLIPMVAFALLKATNDFPFGGTSILIVVGVGLDTVKQIES 420
Query: 480 EIISQKYK 487
++ + Y+
Sbjct: 421 QLQQRNYE 428
>gi|157377430|ref|YP_001476030.1| preprotein translocase subunit SecY [Shewanella sediminis HAW-EB3]
gi|157319804|gb|ABV38902.1| preprotein translocase, SecY subunit [Shewanella sediminis HAW-EB3]
Length = 446
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 243/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L ++G + + R G ++P+ G++ A + N + ++L + FSGG + R I
Sbjct: 18 LKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTILGMFNMFSGGALERASIF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GRKK+ QYTRY ++ QAIG
Sbjct: 78 ALGIMPYISASIIMQLLTVVHPALAEL-KKEGESGRKKISQYTRYGTLVLGTFQAIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + +V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T +A Q D N + L I + + +V+V+ +R+I +NYA R R
Sbjct: 197 PSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTYFVVFVERGQRRIVVNYAKRQQGRKVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP K+N +GV+P IF++S + PGTLA++ G ++ L ++A++PG Y
Sbjct: 257 AQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESLSWLSDFSLAVSPGQPLYSL 316
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 317 LYASAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 376
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + T + + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 YITFICLIPEFMLITWKVQFY--FGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429
>gi|332560160|ref|ZP_08414482.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
gi|332277872|gb|EGJ23187.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides WS8N]
Length = 452
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 231/410 (56%), Gaps = 22/410 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
+G L + RLG YIP+ G++ A +D + + L+ F+GG I R+GI +LGI+P+I
Sbjct: 31 IGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMGIFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QL+A + P+L+ L K+EGE GRKK+ QYTRY +V A QA G + L D
Sbjct: 91 SASIIVQLMASMVPRLEQL-KKEGEQGRKKINQYTRYGTVFLATFQAWGIAMSLE--AGD 147
Query: 212 FSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD + V L G+ F ++GE+I+ +GNG SL+IF I++ +PA + +
Sbjct: 148 LVTDPGMFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPAHLAQFL 207
Query: 268 AE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
++ A +G+ ++I+ I V V+++ A RKI I Y R S++
Sbjct: 208 SQGRSGAISPAVIVGVIAMVIAVITFV---VFMERALRKIHIQYPRRQVGMKVYDGGSSH 264
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---ALKKAAVALNPGGSFYLPTNILLI 380
LP KVN +GV+P IF++S L LP T++ F+G + PG YL +I
Sbjct: 265 LPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTILAYFGPGQPLYLLFFAGMI 324
Query: 381 AFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
FF Y+YT + DDV+E LK Q IP +RPGK T +L+ V++RI VLGS +LA +
Sbjct: 325 VFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYVVNRILVLGSAYLAAV 384
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 385 CLLPEILRNQLGIPFY--FGGTSVLIVVSVTMDTINQVQSHLLAHQYEGL 432
>gi|110678749|ref|YP_681756.1| preprotein translocase subunit SecY [Roseobacter denitrificans OCh
114]
gi|109454865|gb|ABG31070.1| preprotein translocase, SecY subunit [Roseobacter denitrificans OCh
114]
Length = 454
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 242/419 (57%), Gaps = 24/419 (5%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ--NSLLSTLDSFSGGGIGRLGIC 143
L + L LG L + RLG +IP+ G++ A ++Q + + F+GG +GR+GI
Sbjct: 23 LRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMGIF 82
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QL+ + PKL+ L K+EGE GRKK+ QYTRY +V A +QA G +
Sbjct: 83 ALGIMPYISASIIVQLMTAMVPKLEAL-KKEGEQGRKKINQYTRYGTVFLATLQAYGLAV 141
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L D TD + + V L G+ F ++GE+I+ +GNG SL+IF II+ +
Sbjct: 142 SLE--AGDIVTDPGMFFRASCVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEV 199
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILL-----VLGIVYVQEAERKIPINYASRYTSR 314
PA+ +A+ F G ++ +I +++ ++ +V+++ A RKI I Y R
Sbjct: 200 PAA----MAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERALRKIHIQYPRRQVGM 255
Query: 315 SGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSF 371
S++LP KVN +GV+P IF++S L LP T++ F+G + + PG
Sbjct: 256 KVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNPIMSWLLANFGPGQPL 315
Query: 372 YLPTNILLIAFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
YL +I FF Y+YTF + PDDV++ LK Q IP +RPGK T+ +L+ V++R+ V
Sbjct: 316 YLAFFTTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKKTSEYLEYVVNRVLV 375
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
LGS +LA + P ++ + + F GTSVLI+V DT ++VQ+ +++ +Y+ +
Sbjct: 376 LGSAYLAAVCLLPEILRGEFAIPFY--FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGL 432
>gi|77462279|ref|YP_351783.1| preprotein translocase subunit SecY [Rhodobacter sphaeroides 2.4.1]
gi|77386697|gb|ABA77882.1| protein translocase subunit secY/sec61 alpha [Rhodobacter
sphaeroides 2.4.1]
Length = 452
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 231/410 (56%), Gaps = 22/410 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
+G L + RLG YIP+ G++ A +D + + L+ F+GG I R+GI +LGI+P+I
Sbjct: 31 IGLLMVYRLGTYIPVPGIDGSALRQFMDSATAGIGGMLNMFTGGAISRMGIFALGIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVND 211
+A I+ QL+A + P+L+ L K+EGE GRKK+ QYTRY +V A QA G + L D
Sbjct: 91 SASIIVQLMASMVPRLEQL-KKEGEQGRKKINQYTRYGTVFLATFQAWGIAMSLE--AGD 147
Query: 212 FSTDWVL----TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
TD L V L G+ F ++GE+I+ +GNG SL+IF I++ +PA + +
Sbjct: 148 LVTDPGLFFRAACVITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIVAEIPAHLAQFL 207
Query: 268 AE----AFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
++ A +G+ ++I+ I V V+++ A RKI I Y R S++
Sbjct: 208 SQGRSGAISPAVIVGVIAMVIAVITFV---VFMERALRKIHIQYPRRQVGMKVYDGGSSH 264
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA---ALKKAAVALNPGGSFYLPTNILLI 380
LP KVN +GV+P IF++S L LP T++ F+G + PG YL +I
Sbjct: 265 LPVKVNPAGVIPAIFASSLLLLPVTISTFSGQQTGPVMSTILAYFGPGQPLYLLFFAGMI 324
Query: 381 AFFNYYYTF-LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
FF Y+YT + DDV+E LK Q IP +RPGK T +L+ V++RI VLGS +LA +
Sbjct: 325 VFFAYFYTANVAFKVDDVAENLKNQNGFIPGIRPGKKTEEYLEYVVNRILVLGSAYLAAV 384
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P ++ + + F GTSVLI+V DT +VQ+ +++ +Y+ +
Sbjct: 385 CLLPEILRNQLGIPFY--FGGTSVLIVVSVTMDTINQVQSHLLAHQYEGL 432
>gi|302390977|ref|YP_003826797.1| protein translocase subunit secY/sec61 alpha [Acetohalobium
arabaticum DSM 5501]
gi|302203054|gb|ADL11732.1| protein translocase subunit secY/sec61 alpha [Acetohalobium
arabaticum DSM 5501]
Length = 419
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 240/407 (58%), Gaps = 16/407 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K +L +A+ R+G +IP+ GV+ Q LL LD FSGG + R I ++ I
Sbjct: 17 KIFFILAMIAVYRIGAHIPVPGVDPSRLSELFQQGGLLGFLDMFSGGALRRFTIFAMSIN 76
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+I A I+ QLL + P+L++L K +G+ G+K + QYTRYA+V A++Q G L+++
Sbjct: 77 PYITASIIMQLLTVVIPRLEELSK-QGQEGKKVIAQYTRYATVVLALIQGFGITLWIKNL 135
Query: 209 --VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT 266
+ + + + T + LT G+AF ++GE+I+D +GNG S++IF S+IS P++
Sbjct: 136 GAIANPTYFTLFTIIITLTAGTAFLMWLGEQITDKGIGNGISIIIFASVISRAPSAVIGI 195
Query: 267 VAEAFQDGNYIGLATIIISFILLVLGIV------YVQEAERKIPINYASRYTSRSGGLQR 320
V + +G +I F L++ +V Y+Q+ ERKIP+ Y+ R R +
Sbjct: 196 VRKL-----QVGAISIFNVFFFLIIAVVIVAAIIYIQQGERKIPVQYSKRVVGRKVYGGQ 250
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLI 380
S ++P KVN +GV+P+IF++S L P T+A+ + A AL+PG + Y LLI
Sbjct: 251 STHIPLKVNQAGVIPVIFASSVLLFPATIAKILPYGWAQSLADALSPGSALYTALYALLI 310
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
FF Y+YT +Q +P +V++ +K+ G +P RPG+ TA +L +L+RI++ G++FLA +A
Sbjct: 311 IFFTYFYTAIQFNPREVADNIKQNGGFVPGRRPGRPTAEYLDRILTRITLAGAIFLAAVA 370
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P + T + F GT++LI++G A T ++++ +++ + Y+
Sbjct: 371 VLPNFVMSITGIEV--RFGGTALLIVIGVALQTMKEIETQLLQRHYQ 415
>gi|317123078|ref|YP_004103081.1| protein translocase subunit secY/sec61 alpha [Thermaerobacter
marianensis DSM 12885]
gi|315593058|gb|ADU52354.1| protein translocase subunit secY/sec61 alpha [Thermaerobacter
marianensis DSM 12885]
Length = 422
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 241/414 (58%), Gaps = 16/414 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G L G+ L L L + RLG+++P GV E S+ LD F+GG + + +
Sbjct: 12 GDLRGRILFTLAMLLVFRLGVHVPTPGVIPERVAPLFGTGSIFRLLDLFAGGALATVSVF 71
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
++ I P+IN+ I+ QLL + P+L++L K EGE GR+K+ Q TRY +V A++QA G
Sbjct: 72 AMSITPYINSSIIVQLLTVVIPRLEELAK-EGEEGRRKLTQLTRYGTVVMALLQAGGIAF 130
Query: 204 YLRPYVNDFSTDW------VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
YL + +W + ++TL T G+ +IGE+I+D +GNG SLLIF I+S
Sbjct: 131 YLH---RAGALEWPGFPGMAVVAITL-TAGTVLLMWIGEQITDKGIGNGISLLIFAGIVS 186
Query: 258 YLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
LP T+ E ++ G N + +++ + +++ +V+V E +R+IP+ YA R R
Sbjct: 187 RLPHGL-VTLVEMWRAGSVNLFQILLLVVVGLAVIVAVVWVTEGQRRIPVQYAKRVVGRR 245
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK-AAVALNPGGSFYLP 374
+S ++P +VN +GV+P+IF+ S +ALP T+A F A + A + G
Sbjct: 246 IYGGQSTHIPIRVNQAGVIPVIFAASLVALPLTVAGFFPRAGWSQFIARWFDWGTPLNTA 305
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
LI F ++YT + +P D+++ L++ G IP +RPG+ TA +L V+ RI+V G++
Sbjct: 306 VYFWLIIGFTFFYTAITFNPQDIADNLRKYGGYIPGLRPGRPTAEYLARVVMRITVFGAL 365
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
FLA+++ P ++ TH+ + F GT++LI+VG A +T ++++A ++ ++Y+
Sbjct: 366 FLALISVLPLLVRGVTHIASIY-FGGTALLIVVGVALETMKQIEAHLLMRQYQG 418
>gi|293190239|ref|ZP_06608735.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
gi|292821055|gb|EFF80008.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
F0309]
Length = 430
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 238/427 (55%), Gaps = 22/427 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS---LLSTLDSFS 133
F F+ P L K L L +A RLG +IP GV+ +A + Q S LL ++ FS
Sbjct: 5 FAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLVNLFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L I +LGI+P+I A I+ QLL + P+ DL K EG+ G+ K+ QYTRY ++
Sbjct: 65 GGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHK-EGQTGQAKLTQYTRYLTIFL 123
Query: 194 AIVQAIGQVLYLRP----------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA + R + D S + + ++ G+ ++GE I++ +
Sbjct: 124 GILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITERGI 183
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG SLLIFTSI + LP + Q G + +A I+ +L+ + +VYV++A+R+I
Sbjct: 184 GNGMSLLIFTSIAARLP----EQLLSIGQAGKWGSVAAIVALLLLVAIAVVYVEQAQRRI 239
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA 361
P+ YA R R + Y+P K+N SGV+P+IF++S LALP A+F ++
Sbjct: 240 PVQYAKRMIGRRQYGGTTTYIPLKINMSGVIPVIFASSILALPPMAAQFGSPDDKWVQWI 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ G SFYL L+ FF ++YT + +PD+V++ +K+ G IP R G+ TA +L
Sbjct: 300 SAHFTQGSSFYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGFIPGYRAGRPTAEYL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAE 480
+ V++RI+ G+++L I+A P++ L++ + F GT++LI++G T +++ +
Sbjct: 360 RYVINRITTAGALYLVIIALLPSLAIIPLQLSSSQMPFGGTTLLIIIGVGLQTVKEINTQ 419
Query: 481 IISQKYK 487
+ Y+
Sbjct: 420 LQQHHYE 426
>gi|392988157|ref|YP_006486750.1| preprotein translocase subunit SecY [Enterococcus hirae ATCC 9790]
gi|392335577|gb|AFM69859.1| preprotein translocase subunit SecY [Enterococcus hirae ATCC 9790]
Length = 431
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 236/408 (57%), Gaps = 32/408 (7%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
RLG +I + GVN + + NL + L+ SG + I S+G+ P+I A IV QLL
Sbjct: 29 RLGAHITVPGVNASS-LQNLSSLPFFNMLNLVSGSAMQNFSIFSMGVSPYITASIVIQLL 87
Query: 161 AQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-----VNDFST 214
I P+ + K +GE GRKK+ Q TRY ++ A VQ++G Y VN+ +
Sbjct: 88 QMDIVPRFVEWSK-QGEVGRKKLNQATRYLTLVLAFVQSVGITAGFNQYAQLGFVNNPNV 146
Query: 215 DWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG 274
+T +LT G+ F T++GE+I++ +GNG S++IF IIS LP S + F +
Sbjct: 147 STYVTIGLILTAGTMFVTWLGEQITEKGIGNGVSMIIFAGIISRLPESVKEIYEDYFVNI 206
Query: 275 NY-------IGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFK 327
N I +A +I++ +L+V + + Q+AERKIPI +YT R G S+YLP K
Sbjct: 207 NQSDIWKSAIFIAILIVAILLIVTCVTFFQQAERKIPI----QYTKRVAGAPTSSYLPLK 262
Query: 328 VNSSGVMPIIFSTSSLALPGTL-----ARFTGIAALKKAAVALN----PGGSFYLPTNIL 378
VN++GV+P+IF++S +A P + RF K N PG + Y IL
Sbjct: 263 VNAAGVIPVIFASSFIATPNAVLQALSGRFGAENWYKIMMQIFNYNTAPGATIY---TIL 319
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
++AF ++Y F+Q++P+ ++E L++QG+ IP VRPGK T ++ ++L R+S +G++FL +
Sbjct: 320 IVAF-TFFYAFVQVNPEKLAENLQKQGSYIPSVRPGKGTEEYVSSLLMRLSTVGAIFLGL 378
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+A P + + +L G GTS+LI++G A +TA++++ ++ +KY
Sbjct: 379 VALLPIIAQMIWNLPQSIGLGGTSLLIVIGVALETAKQLEGLMLKRKY 426
>gi|209693944|ref|YP_002261872.1| preprotein translocase subunit SecY [Aliivibrio salmonicida
LFI1238]
gi|208007895|emb|CAQ78025.1| preprotein translocase SecY subunit [Aliivibrio salmonicida
LFI1238]
Length = 443
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 247/419 (58%), Gaps = 20/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
L + L ++G L + R G ++P+ G++ A + +L Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVIGALLVFRAGSFVPIPGID-AAVLADLFEQQQGTIIEMFNMFSGGALSRASI 77
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A IV QLL ++P L +L K+EGE+GR+K+ QYTRY ++ A QAIG
Sbjct: 78 LALGIMPYISASIVVQLLTVVHPPLAEL-KKEGESGRRKINQYTRYGTLVLATFQAIGIS 136
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L + ++ + LT+ L G+ F ++GE+I++ +GNG SL+IFT I++
Sbjct: 137 TGLPSMIPGLVSNPDMMFYLTATVSLITGTMFLMWLGEQITERGIGNGISLIIFTGIVAG 196
Query: 259 LPASFGRTVAEAFQD--GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
LP + G T+ +A Q + L ++SF ++ +V+++ +R+I +NYA R R
Sbjct: 197 LPPAIGETIQQARQGELHVLLLLLIAVLSFAVIYF-VVFMERGQRRIVVNYAKRQQGRKV 255
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG------IAALKKAAVALNPGGS 370
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 256 FAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGGNGEGTFGWLTDVSMALSPGQP 315
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ T ++ V++R+++
Sbjct: 316 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTTKYIDKVMTRLTL 375
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++SQ+Y+++
Sbjct: 376 AGAMYITFICLIPEFMMIAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSQQYESV 432
>gi|406980286|gb|EKE01911.1| hypothetical protein ACD_21C00025G0022 [uncultured bacterium]
Length = 439
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 242/410 (59%), Gaps = 36/410 (8%)
Query: 101 RLGIYIPLGGVN--REAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQ 158
R+G +IP+ G++ R A + N +N L+ FSGG + R I +LG++P+I++ I+ Q
Sbjct: 31 RIGSHIPVPGMDPQRLADIFNQQKNGLMGLFSMFSGGNLKRFTIFALGVMPYISSSIIVQ 90
Query: 159 LLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG---------QVLYLRPYV 209
L + P L+ L K+EGE+GR+K+ QYTRY ++ A QA G VL PY
Sbjct: 91 LFTSVLPPLEQL-KKEGESGRRKINQYTRYGTLALAFFQAFGIAKWLASSGSVLIPGPYF 149
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
+ +T++TL T G+ F ++GE++++ +GNG S+LIF I+S P++ + + +
Sbjct: 150 ------YFVTTITLAT-GTMFLVWLGEQMTERGIGNGISMLIFAGIVSSFPSAVVQVMGQ 202
Query: 270 AFQDGNYIGLATIIISFILLVLGIV------YVQEAERKIPINYASRYTSRSGGLQRSAY 323
Q G +I F+LL + +V +++ +R+I +NYA R T R +S+
Sbjct: 203 VRQ-----GQMQVISLFLLLAIVVVVTGVVVFIERGQRRITVNYAKRQTGRMLYNAQSSN 257
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL 379
LP K+N +GV+P IF++S + P TLA++ G+ L + +V L+ G Y+ +
Sbjct: 258 LPLKINMAGVIPPIFASSIIMFPATLAQWFGQGKGMEWLGQVSVLLSMGQPLYMICYSVA 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I FF ++YT L +P +++E LK+ GA IP +RPG +TA+++ V++R++ G++++ ++
Sbjct: 318 IVFFCFFYTALVFNPKEIAENLKKSGAFIPGIRPGDNTASYIDLVITRLTFFGAIYITLI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+ P V+ T H+ + F GTS+LI+V D +VQA ++S +Y +I
Sbjct: 378 SLLPDVLMFTWHIPFY--FGGTSLLIVVVVLMDFMAQVQAHMLSHQYDSI 425
>gi|332289208|ref|YP_004420060.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
gi|330432104|gb|AEC17163.1| preprotein translocase subunit SecY [Gallibacterium anatis UMN179]
Length = 441
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 248/415 (59%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R +
Sbjct: 19 LKRRLLFVLGALIVFRIGSFIPVPGIDSAVLAQVIEQQKGTIVDMFNMFSGGALSRASVF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P L +L K+EGEAGR+K+ +YTRY+++ A +QAIG
Sbjct: 79 ALGIMPYISASIIIQLLTSVYPALAEL-KKEGEAGRRKISKYTRYSTLALATIQAIGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF I++ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGVGNGISLIIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ T+ +A Q ++ + +I + V +V+V+ +R++ +NYA R R
Sbjct: 198 PSAIAHTIEQARQGQMHLLVLLLIAVVVFAVTYFVVFVERGQRRLVVNYAKRQQGRHMLA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLP 374
+S++LP KVN +GV+P IF++S + P T+ ++ G+ L ++ L+PG YL
Sbjct: 258 AQSSHLPLKVNMAGVIPAIFASSIILFPATITQWFGQGQGLDWLNDLSMLLHPGQPLYLI 317
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
+ I FF+++Y+ +Q +P D ++ LK+ GA +P +RPG+ T+ ++ +++R++++G +
Sbjct: 318 LYAVAIIFFSFFYSAMQYNPRDTADNLKKSGAFLPGIRPGEQTSRYIDKIMTRLALIGGL 377
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P ++ ++ + F GTS+LI+V D +VQ+ ++S +Y+++
Sbjct: 378 YVTFVCLVPYIMTSAWNVQFY--FGGTSLLIVVVVIMDFIAQVQSHLMSSQYESV 430
>gi|386402195|ref|ZP_10086973.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. WSM1253]
gi|385742821|gb|EIG63017.1| preprotein translocase, SecY subunit [Bradyrhizobium sp. WSM1253]
Length = 443
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 248/432 (57%), Gaps = 13/432 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++FG F K L + LG L + RLG YIPL G++ + V
Sbjct: 4 AAEQLAANLNFGAFAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWEQVFRSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGE+GRK + Q
Sbjct: 64 ILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEAL-KKEGESGRKLLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A Q+ G + L V+D + L++ LT G+ F ++GE+I+
Sbjct: 123 YTRYLTVILAAFQSYGIAVGLEGAGNVVSDPGMFFRLSTAITLTGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG-IVYVQEAE 300
+GNG SL+I + I++ LPA+ + Q GL ++I + V+ IV+V+ A+
Sbjct: 183 GIGNGISLIILSGIVAELPAALANMLELGRQGAMSTGLILVVIVMAVAVIAFIVFVERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---TGIAA 357
R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A F +G
Sbjct: 243 RRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGSGPEW 302
Query: 358 LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+ T
Sbjct: 303 FQWITTQLGHGRPLFLIMYLALIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERT 362
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A ++ VLSRI+VLG+V+LAI+ P ++ + + F GTS+LI+V DT +V
Sbjct: 363 AEYIDYVLSRITVLGAVYLAIVCLIPEILISYASVPFY--FGGTSLLIVVSVTMDTVAQV 420
Query: 478 QAEIISQKYKNI 489
Q +++ +Y+ +
Sbjct: 421 QGYLLAHQYEGL 432
>gi|228950678|ref|ZP_04112812.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229041035|ref|ZP_04189798.1| Preprotein translocase subunit secY [Bacillus cereus AH676]
gi|229067895|ref|ZP_04201212.1| Preprotein translocase subunit secY [Bacillus cereus F65185]
gi|228715254|gb|EEL67113.1| Preprotein translocase subunit secY [Bacillus cereus F65185]
gi|228727332|gb|EEL78526.1| Preprotein translocase subunit secY [Bacillus cereus AH676]
gi|228809029|gb|EEM55514.1| Preprotein translocase subunit secY [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 398
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 228/382 (59%), Gaps = 16/382 (4%)
Query: 121 DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGR 179
DQ + L L++F GG + I ++GI+P+I A I+ QLL + PK + K +GE GR
Sbjct: 13 DQLNALGILNTFGGGALKNFSIFAMGIMPYITASIIVQLLQMDVVPKFSEWSK-QGEMGR 71
Query: 180 KKVLQYTRYASVGFAIVQAIGQVLYLRPYVND---FSTDW--VLTSVTLLTLGSAFTTYI 234
+K+ Q+TRY ++ A +Q G + V + W L T+LT G+AF ++
Sbjct: 72 RKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGTAFLMWL 131
Query: 235 GERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD-GNYIGLATIIISFILL---- 289
GE+I+ +GNG S+LIF I + +P+ + + FQ+ G+ + ++ + ++ ILL
Sbjct: 132 GEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLA 191
Query: 290 -VLGIVYVQEAERKIPINYASRYTSRSGGLQ--RSAYLPFKVNSSGVMPIIFSTSSLALP 346
++G++++Q+A RKIPI YA R T +GG ++ +LP KVNS+GV+P+IF+ S L P
Sbjct: 192 VIVGVIFIQQAVRKIPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITP 251
Query: 347 GTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQG 405
T+A+F + + +A N + + LI F Y+Y F+Q++P+ +SE L +QG
Sbjct: 252 PTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVALIVAFTYFYAFVQVNPEQMSENLNKQG 311
Query: 406 ASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLI 465
+P +RPGK+T +L +L R++ +GS+FLA +A P + + +L GTS+LI
Sbjct: 312 GYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLI 371
Query: 466 LVGCATDTARKVQAEIISQKYK 487
+VG A +T ++++++++ + YK
Sbjct: 372 VVGVALETMKQLESQLVKRHYK 393
>gi|395789480|ref|ZP_10469000.1| preprotein translocase, SecY subunit [Bartonella taylorii 8TBB]
gi|395430023|gb|EJF96075.1| preprotein translocase, SecY subunit [Bartonella taylorii 8TBB]
Length = 448
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N ++ + ++
Sbjct: 4 AAEQFASNINFGAFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDSLRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVIPSLETL-KKEGEVGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGIAVALETGIGTGLQIVLEPGFMFRVSSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ LP++F + + A + D + L I++ + ++ IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANLPSTFAQLLTAHSQADLSTFLLIAIVLIAVSVIGIIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ +L+AFF ++YT + +P D ++QLK+ +P +RPG
Sbjct: 303 PQWVQAISYSLGHGQPLYMIVYAILMAFFCFFYTAIVFNPSDTADQLKKHSGFVPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + + + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALQVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|330444131|ref|YP_004377117.1| preprotein translocase subunit SecY [Chlamydophila pecorum E58]
gi|328807241|gb|AEB41414.1| preprotein translocase SecY subunit [Chlamydophila pecorum E58]
Length = 457
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 239/421 (56%), Gaps = 31/421 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRLGICSLGIVPFI 151
LA R+G++IP+ G+N E V Q +L D FSGG ++ + +LG+VP+I
Sbjct: 24 LAACRVGVFIPVPGINGERAVAYFKQLLGSSQNLFQLADIFSGGAFAQMTVIALGVVPYI 83
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI------------ 199
+A I+ QLL P LQ + + G++++ + TR +VG AIVQ++
Sbjct: 84 SASIIVQLLLVFMPSLQRELRESPDQGKRRIGRLTRMFTVGLAIVQSLLFAKFALRMNLT 143
Query: 200 --GQVL--YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
G VL + P + + +T+V ++T G+ +IGE+ISD +GNG SL+I I
Sbjct: 144 IPGIVLPILVSPQIFGVPLLFYMTTVIVMTTGTLLLMWIGEQISDKGIGNGISLIIALGI 203
Query: 256 ISYLPASFGRTVAEAF---QDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYAS 309
++ P+ G V + QD + +GL +I++ F+ +++ + + E RKIP+ YA
Sbjct: 204 LASFPSVLGSIVNKLHLGSQDPSDLGLVSILLLCAVFVFVLIATILIIEGVRKIPVQYAR 263
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--LKKAAVALNP 367
R R +YLP KVN +GV+P+IF++S L P T+ +F + +K+ A L+P
Sbjct: 264 RVIGRREVPGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQFMSSESSWIKRVASMLSP 323
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y + LI FF Y++T Q P+ ++ ++K+ A IP +R GK+T +L+ ++R
Sbjct: 324 GSWVYSLLYVFLIIFFTYFWTATQFHPEQIASEMKKNNAFIPGIRQGKATQGYLEYTMNR 383
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGF--AGTSVLILVGCATDTARKVQAEIISQK 485
+++LG+VFLA++A P+++ + H+ + + GT++LI+VG DT ++V A ++ ++
Sbjct: 384 VTLLGAVFLAVIAILPSILGRVLHVDSNVSYFLGGTAMLIIVGVILDTMKQVDAFLLMRR 443
Query: 486 Y 486
Y
Sbjct: 444 Y 444
>gi|389866498|ref|YP_006368739.1| preprotein translocase subunit SecY [Modestobacter marinus]
gi|388488702|emb|CCH90280.1| Preprotein translocase secY subunit [Modestobacter marinus]
Length = 436
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 248/433 (57%), Gaps = 28/433 (6%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLD 130
F F+ P L K L L +A+ RLG +P GV+ EA LDQ + S ++
Sbjct: 5 FAAAFRTPDLRRKLLFSLALIAVYRLGASVPGPGVSIEAINSCLDQANASDQRDVYSLVN 64
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
FSGG + RL + +LGI+P+I A I+ QLL + P+ + L K+EG++G+ K+ QYTRY +
Sbjct: 65 LFSGGALLRLSVFALGIMPYITASIIVQLLVVVIPRFEQL-KKEGQSGQAKLTQYTRYLT 123
Query: 191 VGFAIVQAIGQVLYLR-----PYVND--FSTDWVLTSVTL---LTLGSAFTTYIGERISD 240
+ A++Q+ G + R P + +D V T++ L LT G+A ++GE +++
Sbjct: 124 IALAVLQSTGIIALARSGQLFPSCSQDIIPSDSVWTTIVLVVTLTAGTAVIMWLGELLTE 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+LIFTSI + +PA G + G ++ A I + +L++ +VYV++A+
Sbjct: 184 KGIGNGMSVLIFTSIAARIPAEGGAILQS---RGGFV-FALICVLAVLVIASVVYVEQAQ 239
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG--IAAL 358
R+IP+ YA R R S YLP KVN +GV+P+IF++S L LP + + G A+
Sbjct: 240 RRIPVQYAKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLLYLPQLITQLQGDSTGAV 299
Query: 359 KK--AAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
++ ++ ++ LI FF Y+Y + +P++ ++ +KR G IP +RPG+
Sbjct: 300 RRFVENYLVDQSSPVHIAVYFALIIFFTYFYVSITFNPEERADDMKRYGGFIPGIRPGRP 359
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTA 474
TA +L+ VLSRI++ GS++L ++A P + T + F GT+VLI+VG +T
Sbjct: 360 TAEYLQYVLSRITLPGSIYLGLVAVLPNLFLSITQEGQNQNFPFGGTAVLIMVGVGLETV 419
Query: 475 RKVQAEIISQKYK 487
++++ ++ + Y+
Sbjct: 420 KQIETQLNQRSYE 432
>gi|445062100|ref|ZP_21374535.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
gi|444506495|gb|ELV06822.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30599]
Length = 446
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 236/414 (57%), Gaps = 29/414 (7%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L + LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPTALLGFLSSSQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN------ 210
QLL + P L+ +QK EGE+GRKK+ QY RY ++ IVQ+ +++ +N
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLVLCIVQSAAMASWIQS-INEGAMIF 146
Query: 211 -DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
D ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA + +
Sbjct: 147 MDPGIGFILLVVVTATAGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGVYDVIQK 206
Query: 270 AFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
++ Y+ I++ FI+ + +VY + +R+IP+ YA R R +S ++PF
Sbjct: 207 --RESEYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQSTHIPF 264
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILLIAFF 383
K+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL+ F
Sbjct: 265 KINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLLVIMF 324
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
Y YT +Q +PDD++E LK+ G IP RPG TA +LKTVLSRI++ GS+FLA +A P
Sbjct: 325 AYVYTSVQFNPDDIAENLKKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFP 384
Query: 444 AVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + FRG GTSV+I V A + +++++ + Y I
Sbjct: 385 DLMSKIPIFAPFRGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|374333991|ref|YP_005090678.1| preprotein translocase subunit SecY [Oceanimonas sp. GK1]
gi|372983678|gb|AEX99927.1| preprotein translocase subunit SecY [Oceanimonas sp. GK1]
Length = 443
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 243/418 (58%), Gaps = 18/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
L + L +L + + R G Y+P+ G++ A + +L Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLIAIVVFRAGSYVPIPGID-AAVLADLFQQQQGTIIEMFNMFSGGALERASI 77
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGI+P+I+A I+ QLL ++P L +L K+EGEAGR+K+ QYTRY ++ +QAIG
Sbjct: 78 LALGIMPYISASIIIQLLTVVHPPLAEL-KKEGEAGRRKISQYTRYGTLVLGTIQAIGIA 136
Query: 203 LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
L + + + T+V L G+ F ++GE+I++ +GNG SL+IFT I++
Sbjct: 137 TGLPNMMPGLVINPGLAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAG 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLV-LGIVYVQEAERKIPINYASRYTSRSGG 317
LP++ G T +A Q +I L ++ + V +V+V+ +R+I +NYA R R
Sbjct: 197 LPSAIGATAEQARQGELHILLLLLLAVIVFAVTYFVVFVERGQRRIVVNYAKRQQGRQVF 256
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA------LKKAAVALNPGGSF 371
+S +LP KVN +GV+P IF++S + PGT+A + G L++ ++ L PG
Sbjct: 257 AAQSTHLPLKVNMAGVIPAIFASSIILFPGTVASWFGQGEGWFANLLQELSLTLQPGQPL 316
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA IP +RPG+ TA ++ V++R++++
Sbjct: 317 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTARYIDKVMTRLTLV 376
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 377 GALYITFICLVPQFLMTAWNVQFY--FGGTSLLIIVVVIMDFMAQVQTHMMSHQYGDV 432
>gi|46399705|emb|CAF23154.1| putative preprotein translocase SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 493
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 234/419 (55%), Gaps = 30/419 (7%)
Query: 98 ALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
A+ RLG +IP+ G+N E V +L +D FSGG ++ + +LG+ P+I+
Sbjct: 63 AVCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYIS 122
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG------QVLYLR 206
A I+ QLL + P LQ + G+AG++K+ ++TR+ ++ + +Q+ Q+ R
Sbjct: 123 ASIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSR 182
Query: 207 P--------YVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
P + F W+ L ++ +T G+ F ++GE+I++ +GNG SL+I I+
Sbjct: 183 PGIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGIL 242
Query: 257 SYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
S +P + G + D N+ + +I F+++ L + V + R+IP+ +A R
Sbjct: 243 SQIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQHARR 302
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-LKKAAVALNPGG 369
R S+Y+P K+N +GV+P+IF++S L P TL F G L + A L+PGG
Sbjct: 303 VVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNWLGEVANWLSPGG 362
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + LI FF Y++T Q PD ++ +K+ GA IP +R GK T +L++ ++R++
Sbjct: 363 PLYLVLFVALIIFFTYFWTATQFRPDQIASDMKKNGAFIPGIRQGKPTQDYLESTMNRVT 422
Query: 430 VLGSVFLAILAAGPAVIEQTTHL--TAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+LG+VFLA++A P +I + T F GT++LILVG DT ++V++ ++ ++Y
Sbjct: 423 LLGAVFLALIAILPTMIGSVLGVPPTISYFFGGTALLILVGVVLDTMKQVESHLLMKRY 481
>gi|170738683|ref|YP_001767338.1| preprotein translocase subunit SecY [Methylobacterium sp. 4-46]
gi|168192957|gb|ACA14904.1| preprotein translocase, SecY subunit [Methylobacterium sp. 4-46]
Length = 445
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 246/436 (56%), Gaps = 20/436 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNS 124
AA ++++FG K L + LG L + RLG YIPL G++ +A + Q
Sbjct: 4 AAEQLAANLNFGAIAKADELKKRIWFTLGALIVYRLGTYIPLPGIDPDALRQSFANAQGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + FSGG + R+ I +L I+P+I+A I+ QLL + P L+ L K+EGE+GRK + Q
Sbjct: 64 VLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVLPSLEAL-KKEGESGRKVLNQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V AI QA G + L+ V + + +++V LT G+ F +IGE+I+
Sbjct: 123 YTRYLTVVLAIFQAWGIAVGLQSSGGIVQEPGLFFAISTVITLTGGTLFLMWIGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVA----EAFQDGNYIGLATIIISFILLVLGIVYVQ 297
+GNG+SL+IF I+++LP++ T+ A +G+A + + + IV+++
Sbjct: 183 GIGNGSSLIIFAGIVAHLPSAIAGTLELGRQGALSTAVILGVAVMATAVVYF---IVFME 239
Query: 298 EAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF----T 353
A+R++ INY R +++++P K+N+ GV+P IF++S L LP T A F +
Sbjct: 240 RAQRRLLINYPKRQVGNRMYEGQTSFMPLKLNTPGVIPPIFASSLLLLPATAASFQSDPS 299
Query: 354 GIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
G + A L G Y+ LI FF ++YT + +P + ++ LK+ G IP +RP
Sbjct: 300 GTGIVATLATYLGHGRPLYMVLYAALIIFFAFFYTAVVFNPQETADNLKKHGGFIPGIRP 359
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDT 473
G+ TA ++ VLSR++V+G+ +L ++ P ++ L + F GTS+LI+V DT
Sbjct: 360 GERTAEYIDKVLSRVTVIGAAYLTLICLIPEILVSYASLPFY--FGGTSLLIVVSVTMDT 417
Query: 474 ARKVQAEIISQKYKNI 489
+V +++ +Y+ +
Sbjct: 418 VAQVHGHLLAHQYEGL 433
>gi|15807110|ref|NP_295839.1| preprotein translocase subunit SecY [Deinococcus radiodurans R1]
gi|6459912|gb|AAF11665.1|AE002046_11 preprotein translocase, SecY subunit [Deinococcus radiodurans R1]
Length = 439
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 239/426 (56%), Gaps = 23/426 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F D F+ P L K + L LA+ RLG IP GVN A + + L + SGG
Sbjct: 5 FRDAFRIPDLQRKIVFTLLLLAVYRLGGAIPTPGVNSAA-LSQANSGGLFGLISMISGGN 63
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ + I +LG++P+I A IV QLL P L+ L K EGE GRKK+ QYTRYA++ V
Sbjct: 64 LSQFSIFALGVLPYITASIVIQLLTTTIPSLEKLSK-EGEEGRKKINQYTRYAAIALGAV 122
Query: 197 QAIGQVLYLRPYVNDFSTDW------VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
QA+ LY+ + + W VL V G AFT +IGERI+++ +GNG SL+
Sbjct: 123 QALFFSLYITSNPSFIAVGWDPGLFTVLVMVLTQVAGIAFTMWIGERITEVGIGNGISLI 182
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVL----GIVYVQEAERKIPIN 306
I II+ P T A+ + L+ I++FI ++L GIVY+ +AER++P+
Sbjct: 183 ITAGIIAVYPREIAAT-AQLLRSEQTTLLS--ILAFIAVILVTIAGIVYIYQAERRVPVT 239
Query: 307 YASRYTSRSGGLQRS---AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV 363
YA +G + + +LP KVN +GV+P+IF+++ L +P +A T A + A
Sbjct: 240 YARARGGAAGQARGAGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNAW 299
Query: 364 A---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF 420
L G YL LLI F Y Y +Q DP ++EQL+ G IP VRPG TA F
Sbjct: 300 INSNLTFGQPLYLALESLLIFGFTYLYNSVQFDPKRIAEQLREAGGFIPGVRPGGPTADF 359
Query: 421 LKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAE 480
L + R+S+ G++FL IL P ++++ T +T F+ F+GT +LI+VG A +T ++++A+
Sbjct: 360 LGRISGRLSLWGAIFLVILTILPQLVQKATGITTFQ-FSGTGLLIIVGVALETLKQLEAQ 418
Query: 481 IISQKY 486
+ ++Y
Sbjct: 419 LTVRRY 424
>gi|118473505|ref|YP_885865.1| preprotein translocase subunit SecY [Mycobacterium smegmatis str.
MC2 155]
gi|399985867|ref|YP_006566215.1| preprotein translocase subunit secY [Mycobacterium smegmatis str.
MC2 155]
gi|441204891|ref|ZP_20972347.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis MKD8]
gi|118174792|gb|ABK75688.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis str.
MC2 155]
gi|399230427|gb|AFP37920.1| Preprotein translocase subunit secY [Mycobacterium smegmatis str.
MC2 155]
gi|440629357|gb|ELQ91147.1| preprotein translocase, SecY subunit [Mycobacterium smegmatis MKD8]
Length = 441
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 243/426 (57%), Gaps = 32/426 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNRE------AFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L LG + L R+G IP GVN A V D + S ++ FSGG + +L +
Sbjct: 17 KILFTLGLVILYRVGASIPSPGVNYPNVQQCIAQVSGGDSAQIYSLINLFSGGALLQLTV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++G++P+I A I+ QLL + P+ + L+K EG+AG+ K+ QYTRY S+ AI+QA V
Sbjct: 77 FAVGVMPYITASIIVQLLTVVIPRFEQLRK-EGQAGQAKMTQYTRYLSIALAILQATSIV 135
Query: 203 LYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+ D S ++ V ++T G+A ++GE +++ +GNG SLLIF
Sbjct: 136 ALAANGGLLQGCSLDIIQDSSIFGLIVIVLVMTAGAALVMWMGELVTERGIGNGMSLLIF 195
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I + +PA G+T+ E+ G + ++I+ +++++G+V+V++ +R+IP+ YA R
Sbjct: 196 AGIAARIPAE-GQTILES--RGGVV-FTAVVIAALVIIIGVVFVEQGQRRIPVQYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---------TGIAALKKAAV 363
R S YLP KVN +GV+P+IF++S + +P + + TG A
Sbjct: 252 GRKMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIQSGSSNPGTGWWDKFVADY 311
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
NP Y+ LI FF Y+Y + +PD+ ++++K+ G IP +RPGK TA +L+
Sbjct: 312 LTNPADPVYIAVYFGLIVFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGKPTADYLRY 371
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAEI 481
VLSRI++ GS++L ++A P + + + + + F GT+VLI++G DT +++++++
Sbjct: 372 VLSRITLPGSIYLGVIAVLPNLFLEIGNTGSVQNLPFGGTAVLIMIGVGLDTVKQIESQL 431
Query: 482 ISQKYK 487
+ + Y+
Sbjct: 432 MQRNYE 437
>gi|84494766|ref|ZP_00993885.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
gi|84384259|gb|EAQ00139.1| preprotein translocase SecY [Janibacter sp. HTCC2649]
Length = 438
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 248/440 (56%), Gaps = 40/440 (9%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVN----REAFVGNLDQNSLLSTLDSF 132
FG FK P L K L LG +AL RLG +P GV+ + G D N LL + F
Sbjct: 5 FGRAFKTPDLRRKILFTLGIIALYRLGAQVPTPGVSYSLIQACQKGAGDANDLLGLANLF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + +L I +LGI+P+I A I+ QLL + PK + L K+EG+AG+ K+ QYTRY ++
Sbjct: 65 SGGALLQLSIFALGIMPYITASIIIQLLTVVIPKFEAL-KKEGQAGQTKMTQYTRYLTIA 123
Query: 193 FAIVQAIGQV--------LYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISD 240
A++Q+ + L+ P + TD +L V +T G+ ++GE ++D
Sbjct: 124 LAVLQSATFITFAQNPSQLFANPACTNILTDDSIVTILIMVLTMTAGTGLVMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S++IFTSI + P + + + +IG+ I++ F+++ L +V+V++++
Sbjct: 184 HGVGNGMSIMIFTSIAASFPGALWAIQQKEGRWDIFIGI--ILMGFVIIAL-VVFVEQSQ 240
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S LALP LA+F +
Sbjct: 241 RRIPVQYAKRMVGRRVYGGTSTYIPLKVNMAGVIPVIFASSLLALPTLLAQF------NR 294
Query: 361 AAVALNPGGSFYLPTN-------------ILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 407
A +PG ++ +N LI FF ++Y + +P +V++ +K+ G
Sbjct: 295 KADGTSPGWVDWIDSNYAGGDTWAYGATYTALILFFTFFYVSITFNPTEVADNMKKYGGF 354
Query: 408 IPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 467
IP +R G+ TA +L+ VL+RI+V G+++LA+++ P + F GTS+LI+V
Sbjct: 355 IPGIRAGRPTAEYLQYVLTRITVPGAIYLALISIIPLLALVLVGANQNFPFGGTSILIIV 414
Query: 468 GCATDTARKVQAEIISQKYK 487
G +T +++++++ + Y+
Sbjct: 415 GVGLETVKQIESQLQQRHYE 434
>gi|289423654|ref|ZP_06425453.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429727991|ref|ZP_19262737.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
gi|289155904|gb|EFD04570.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
653-L]
gi|429150848|gb|EKX93742.1| preprotein translocase, SecY subunit [Peptostreptococcus anaerobius
VPI 4330]
Length = 422
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 227/394 (57%), Gaps = 11/394 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G IP+ G++ + NSLL + FSGG I +LGI P+I A I+ QLL
Sbjct: 29 RMGTTIPVPGIDTSIIKNMVANNSLLGLYNMFSGGAFSNFTIFALGIGPYITASIIIQLL 88
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLRPYVNDFSTDWVLT 219
L++LQK GE G+KK+ +YTR+ ++G A++QAIG L +R + S ++ T
Sbjct: 89 TAGFESLKELQK-SGEEGKKKINKYTRFTALGLAVIQAIGITLGIVRRALKVNSPFFIFT 147
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYI 277
+ L S ++G+RI++ LGNG+S+LIF IIS P +++ G +
Sbjct: 148 VIITLVAASMMVMWLGDRITEKGLGNGSSVLIFVGIISRTPIDI-IAISQKTSQGIIKWP 206
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+A +++ ++ + G+ ++ E+ RKIP+ YA R R S+++P KVN SGVMPII
Sbjct: 207 AIAVLVVVILITITGVTFINESTRKIPVQYAKRVVGRKMYGGDSSHIPMKVNQSGVMPII 266
Query: 338 FSTSSLALPGTLARFTG--IAALKKAAVALNPGGSF--YLPTNILLIAFFNYYYTFLQLD 393
F++S LALP T+A G + A+ ++ F Y I+LI F+Y+Y + +
Sbjct: 267 FASSILALPQTVALLGGPKMQAIVNNLFNMSTDRGFWTYRSIEIVLIVLFSYFYNTISFN 326
Query: 394 PDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLT 453
+D+++ +K G IP +RPG T +L +LS+++++G+ FL I+A PA+I T ++
Sbjct: 327 TEDIAKNMKNSGGFIPGIRPGNPTETYLNGILSKLTIVGAAFLGIMAMVPALI--THYMQ 384
Query: 454 AFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
GTS+LI+VG A + R++++ ++ + Y+
Sbjct: 385 IPMNLGGTSLLIVVGVALELKRQLESNLVMKNYQ 418
>gi|325293316|ref|YP_004279180.1| Preprotein translocase subunit SecY [Agrobacterium sp. H13-3]
gi|418408648|ref|ZP_12981964.1| preprotein translocase subunit SecY [Agrobacterium tumefaciens 5A]
gi|325061169|gb|ADY64860.1| Preprotein translocase subunit SecY [Agrobacterium sp. H13-3]
gi|358005562|gb|EHJ97888.1| preprotein translocase subunit SecY [Agrobacterium tumefaciens 5A]
Length = 446
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 246/437 (56%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNS 124
AA S+++F F K L + L L + RLG +IPL G+N EA+ N
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK + Q
Sbjct: 64 ILGLFNMFAGGAVERMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L V D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGLFFRISTVITLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLV-LG----IVYV 296
+GNG SL+IF I + LP + +A + G L+T +I +++V +G IV+V
Sbjct: 183 GIGNGISLIIFAGIAAGLP----KALAGTLELGRTGALSTTLILMVVIVAIGVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T A F G
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNT 298
Query: 357 ALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A + L G ++ LLIAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 NLPGWATSIIASLQHGQPLFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+V+L + P + T + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVVGAVYLVFVCILPETLIARTGIPLALG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|154507844|ref|ZP_02043486.1| hypothetical protein ACTODO_00326 [Actinomyces odontolyticus ATCC
17982]
gi|153797478|gb|EDN79898.1| preprotein translocase, SecY subunit [Actinomyces odontolyticus
ATCC 17982]
Length = 430
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 238/427 (55%), Gaps = 22/427 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS---LLSTLDSFS 133
F F+ P L K L L +A RLG +IP GV+ +A + Q S LL ++ FS
Sbjct: 5 FAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESEASLLDLVNLFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L I +LGI+P+I A I+ QLL + P+ DL K EG+ G+ K+ QYTRY ++
Sbjct: 65 GGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHK-EGQTGQAKLTQYTRYLTIFL 123
Query: 194 AIVQAIGQVLYLRP----------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA + R + D S + + ++ G+ ++GE I++ +
Sbjct: 124 GILQATTTISLARSGQLFQSCNHDIIKDRSVMTFIMMIIVMMAGTGVIMWLGELITERGI 183
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG SLLIFTSI + LP + Q G + +A I+ +L+ + +VYV++A+R+I
Sbjct: 184 GNGMSLLIFTSIAARLP----EQLLSIGQAGKWGSVAAIVALLLLVAIAVVYVEQAQRRI 239
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA 361
P+ YA R R + Y+P K+N SGV+P+IF++S LALP A+F ++
Sbjct: 240 PVQYAKRMIGRRQYGGTTTYIPLKINMSGVIPVIFASSILALPPMAAQFGSPNDKWVQWI 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ G SFYL L+ FF ++YT + +PD+V++ +K+ G IP R G+ TA +L
Sbjct: 300 SAHFTQGSSFYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGFIPGYRAGRPTAEYL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAE 480
+ V++RI+ G+++L I+A P++ L++ + F GT++LI++G T +++ +
Sbjct: 360 RYVINRITSAGALYLVIIALLPSLAIIPLQLSSSQMPFGGTTLLIIIGVGLQTVKEINTQ 419
Query: 481 IISQKYK 487
+ Y+
Sbjct: 420 LQQHHYE 426
>gi|170728989|ref|YP_001763015.1| preprotein translocase subunit SecY [Shewanella woodyi ATCC 51908]
gi|169814336|gb|ACA88920.1| preprotein translocase, SecY subunit [Shewanella woodyi ATCC 51908]
Length = 446
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 243/415 (58%), Gaps = 14/415 (3%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNRE--AFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
L + L ++G + + R G ++P+ G++ A + N + ++L + FSGG + R I
Sbjct: 18 LKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTILGMFNMFSGGALERASIF 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL ++P L +L K+EGE+GRKK+ QYTRY ++ QA+G
Sbjct: 78 ALGIMPYISASIIMQLLTVVHPALAEL-KKEGESGRKKISQYTRYGTLVLGTFQAVGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + +V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 GLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 196
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P++ G+T +A Q D N + L I + + +V+V+ +R+I +NYA R R
Sbjct: 197 PSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTYFVVFVERGQRRIVVNYAKRQQGRKVFA 256
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYLP 374
+S +LP K+N +GV+P IF++S + PGTLA++ G ++ L ++A++PG Y
Sbjct: 257 AQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESLSWLSDFSLAVSPGQPLYSL 316
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++ G++
Sbjct: 317 LYASAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTLAGAL 376
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ + P + T + + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 377 YITFICLIPEFMLITWKVQFY--FGGTSLLIMVVVIMDFMAQVQTHMMSHQYESV 429
>gi|326332211|ref|ZP_08198491.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
gi|325949917|gb|EGD41977.1| preprotein translocase, SecY subunit [Nocardioidaceae bacterium
Broad-1]
Length = 436
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 241/437 (55%), Gaps = 36/437 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL----------DQNSLL 126
F F+ P L K L +L + + R G IP GV+ V N+ D L
Sbjct: 5 FASAFRTPDLRKKLLFVLLIVVIFRAGSQIPAPGVH----VANVQQCLDAAQTGDSAGLY 60
Query: 127 STLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYT 186
+ ++ FSGG + +L I +LGI+P+I A I+ QLL + P+L+ L K+EG++G+ K+ QYT
Sbjct: 61 NLVNLFSGGALLQLTIFALGIMPYITASIILQLLVVVIPRLERL-KKEGQSGQTKITQYT 119
Query: 187 RYASVGFAIVQAIGQVLYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
RY ++G A++QA G V R P ++D T L V +T G+A ++GE
Sbjct: 120 RYLTLGLAVLQATGIVALARSGDLLQGCTQPLLHDDGTATFLVMVVTMTAGTAVIMWLGE 179
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV 296
I++ +GNG S+LIFT +++ PA T+ D + A +I+ + ++ ++++
Sbjct: 180 LITERGIGNGMSILIFTQVVATFPA----TMWAVKNDKGWWTFAIVIVIGLAIMAAVIFI 235
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
++A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L LP A+F A
Sbjct: 236 EQAQRRIPVQYARRMVGRKMFGGSSTYIPLKVNQAGVIPVIFASSLLYLPAMAAQFNQNA 295
Query: 357 ALKKAAVA------LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPL 410
A V + Y+ T LI FF Y+Y + +P +V++ +K+ G IP
Sbjct: 296 QNPPAWVDWINTYFVRGDHPVYMATYFALIIFFTYFYVSITFNPPEVADNMKKYGGFIPG 355
Query: 411 VRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCA 470
+R GK T +L VLSRI++ GS++L ++A P + + F GTS+LI+VG A
Sbjct: 356 IRAGKPTEDYLSYVLSRITLPGSLYLGLVALIPLIALALINANQNFPFGGTSILIMVGVA 415
Query: 471 TDTARKVQAEIISQKYK 487
DT +++++++ + Y+
Sbjct: 416 LDTVKQIESQLQQRNYE 432
>gi|271962652|ref|YP_003336848.1| protein translocase subunit SecY/sec61 alpha [Streptosporangium
roseum DSM 43021]
gi|270505827|gb|ACZ84105.1| protein translocase subunit SecY/sec61 alpha [Streptosporangium
roseum DSM 43021]
Length = 438
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 244/438 (55%), Gaps = 36/438 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLD 130
F F+ P L K L LG +AL RLG +P GVN E L Q ++ +
Sbjct: 5 FTRAFRTPDLRNKLLFTLGIIALFRLGSVLPTPGVNNENIARCLQQAQAGDAGNIYGMVQ 64
Query: 131 SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYAS 190
FSGG + +L + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG+ K+ QYTRY +
Sbjct: 65 LFSGGALLKLSVFALGIMPYITASIILQLLVVVIPRLEAL-KKEGQAGQTKITQYTRYLT 123
Query: 191 VGFAIVQ-----AIGQVLYLRPYVND---FSTDWVLTSVTL---LTLGSAFTTYIGERIS 239
+G AI+Q A+ + L P + D V VT+ +T G+A ++GE ++
Sbjct: 124 IGLAILQSTAFIALARTGQLFPQCREDILLDKDNVFAIVTMVLTMTAGTAVIMWLGELVT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPA---SFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV 296
D +GNG S+LIFT +I+ PA + GR Q G ++ A +I++ I ++ +V V
Sbjct: 184 DRGVGNGMSILIFTQVIAVFPAELLNIGR------QKGAFV-FAVVIVTGIAMIALVVMV 236
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
++A+R+IP+ YA R R S Y+P KVN +G++P+IF++S L LP + +
Sbjct: 237 EQAQRRIPVQYAKRMVGRRMYGGTSTYIPLKVNQAGIIPVIFASSLLYLPQLVTTLFSNS 296
Query: 357 ALKKAAVA-------LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 409
+ AV + Y+ T LLI FF Y+Y + +P +V++ +K+ G IP
Sbjct: 297 QEEPNAVVQWIQQNMVTGDTPAYMITFFLLIVFFTYFYVSITFNPVEVADNMKKYGGFIP 356
Query: 410 LVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 469
+RPG+ TA +L VL+R++ G+++L +++ P + + F GTS+LI+VG
Sbjct: 357 GIRPGRPTAEYLNYVLTRLTAPGALYLGLISMVPIIALALVGASQNFPFGGTSILIMVGV 416
Query: 470 ATDTARKVQAEIISQKYK 487
DT +++++++ + Y+
Sbjct: 417 GLDTVKQIESQLQQRNYE 434
>gi|319899079|ref|YP_004159172.1| translocase SecY subunit [Bartonella clarridgeiae 73]
gi|319403043|emb|CBI76598.1| translocase SecY subunit precursor [Bartonella clarridgeiae 73]
Length = 448
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 248/438 (56%), Gaps = 18/438 (4%)
Query: 67 VAAAMED--SSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN 123
+A+A E S+++FG F + L + L L + R G YI L G+N + + +
Sbjct: 1 MASAAEQFVSNMNFGAFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDVLRQTFEHH 60
Query: 124 S--LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKK 181
S +L + F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK
Sbjct: 61 SSGVLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLEAL-KKEGELGRKI 119
Query: 182 VLQYTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYI 234
+ QYTRY +V AI+QA G + L V + + +++V L G+ F ++
Sbjct: 120 INQYTRYMTVILAILQAFGIAVALETGIGTGLQIVIEPGIMFRVSAVISLVGGTIFLMWL 179
Query: 235 GERISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGI 293
GE+I+ +GNG SL+IF I++ P++F + + A + D + L I + + ++ I
Sbjct: 180 GEQITSRGVGNGVSLIIFAGIVANFPSTFAQLLTAHSQADLSTFLLIGIFVIAVSVIGVI 239
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
V+V+ A+R+I I Y R ++ P K+N++GV+P IF++S L LP T+ F+
Sbjct: 240 VFVERAQRRIIIQYPKRQVGNQMFQGDMSHFPLKLNTAGVIPPIFASSLLLLPATINNFS 299
Query: 354 GIAALKKAAVA--LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
AV+ L G Y+ L+AFF ++YT + +P D +EQLKR IP +
Sbjct: 300 DKMPQWIQAVSFFLGHGQPLYMIVYAALMAFFCFFYTAIVFNPSDTAEQLKRHSGFIPGI 359
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 471
RPG+ TA ++ VL+RI+V+G++++ ++ P + T H+ + G GTS+LI+V
Sbjct: 360 RPGERTAEYIDYVLTRITVVGAIYIILICLLPEFMISTLHVPFYLG--GTSLLIVVTVTL 417
Query: 472 DTARKVQAEIISQKYKNI 489
DT ++Q +++ +YK +
Sbjct: 418 DTIAQIQGSLVAHQYKGL 435
>gi|313893111|ref|ZP_07826688.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
gi|313442464|gb|EFR60879.1| preprotein translocase, SecY subunit [Veillonella sp. oral taxon
158 str. F0412]
Length = 420
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 225/408 (55%), Gaps = 11/408 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L A+ R GI+IP+ GV+ +L LD F+GG + + I ++
Sbjct: 14 LRNKILYTLMMFAVFRAGIHIPVPGVDASVIESLFTSGNLFGLLDLFAGGALSKFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P+ + K +GE GRKK+ + TRY +V VQA G L
Sbjct: 74 SITPYINASIIMQLLQSVVPQFEAWSK-DGEDGRKKIAKVTRYGTVVLGFVQAAGMAFAL 132
Query: 206 RP----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
R NDF + +V+ +LT G+ +IGE+I+ +GNG SL+IF I++ LP
Sbjct: 133 RANNALVNNDFLSVFVVA--IILTAGTCLLMWIGEQITAYGIGNGISLIIFAGIVARLPD 190
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYTSRSGGLQ 319
T+ + Q+G + + I L + +V V + +R+IPI YA R R
Sbjct: 191 GL-ETIYQYIQNGTINMFQAFLFAVIALAMIAVVVAVTQGQRRIPIQYAKRVVGRKMYGG 249
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
S +LP KVN +GV+PIIF++S L P T+A+F + K A G LL
Sbjct: 250 HSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEFVHKVADLFTWGTPLQTALYALL 309
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+YT + ++ D+++ +K+ G IP +R GK TA ++ V++RI++ G+VFLA++
Sbjct: 310 IFIFTYFYTAISINITDMADNMKKYGGFIPGIRAGKPTADYVDNVMTRITLAGAVFLAVV 369
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + T + F GT++LI+VG A DT +++++ ++++ YK
Sbjct: 370 AIIPNFLGSITGVQGVY-FGGTALLIVVGVALDTMQQIESLMVTRHYK 416
>gi|229119792|ref|ZP_04249053.1| Preprotein translocase subunit secY [Bacillus cereus 95/8201]
gi|229153908|ref|ZP_04282038.1| Preprotein translocase subunit secY [Bacillus cereus ATCC 4342]
gi|229194520|ref|ZP_04321323.1| Preprotein translocase subunit secY [Bacillus cereus m1293]
gi|228588986|gb|EEK47001.1| Preprotein translocase subunit secY [Bacillus cereus m1293]
gi|228629589|gb|EEK86286.1| Preprotein translocase subunit secY [Bacillus cereus ATCC 4342]
gi|228663693|gb|EEL19272.1| Preprotein translocase subunit secY [Bacillus cereus 95/8201]
Length = 398
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 228/382 (59%), Gaps = 16/382 (4%)
Query: 121 DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGR 179
DQ + L L++F GG + I ++GI+P+I A I+ QLL + PK + K +GE GR
Sbjct: 13 DQLNALGILNTFGGGALKNFSIFAMGIMPYITASIIVQLLQMDVVPKFSEWAK-QGEMGR 71
Query: 180 KKVLQYTRYASVGFAIVQAIGQVLYLRPYVND---FSTDW--VLTSVTLLTLGSAFTTYI 234
+K+ Q+TRY ++ A +Q G + V + W L T+LT G+AF ++
Sbjct: 72 RKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGTAFLMWL 131
Query: 235 GERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD-GNYIGLATIIISFILL---- 289
GE+I+ +GNG S+LIF I + +P+ + + FQ+ G+ + ++ + ++ ILL
Sbjct: 132 GEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLA 191
Query: 290 -VLGIVYVQEAERKIPINYASRYTSRSGGLQ--RSAYLPFKVNSSGVMPIIFSTSSLALP 346
++G++++Q+A RKIPI YA R T +GG ++ +LP KVNS+GV+P+IF+ S L P
Sbjct: 192 VIVGVIFIQQAVRKIPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITP 251
Query: 347 GTLARFTGIAALKKAAVA-LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQG 405
T+A+F + + +A N + + LI F Y+Y F+Q++P+ +SE L +QG
Sbjct: 252 PTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVALIVAFTYFYAFVQVNPEQMSENLNKQG 311
Query: 406 ASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLI 465
+P +RPGK+T +L +L R++ +GS+FLA +A P + + +L GTS+LI
Sbjct: 312 GYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLI 371
Query: 466 LVGCATDTARKVQAEIISQKYK 487
+VG A +T ++++++++ + YK
Sbjct: 372 VVGVALETMKQLESQLVKRHYK 393
>gi|429123840|ref|ZP_19184372.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
gi|426280409|gb|EKV57424.1| preprotein translocase subunit SecY [Brachyspira hampsonii 30446]
Length = 446
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 237/418 (56%), Gaps = 37/418 (8%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L + LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPAALLGFLSSSQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVLYL 205
QLL + P L+ +QK EGE+GRKK+ QY RY ++ IVQ+ G ++++
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLVLCIVQSAAMASWIQSINEGAMIFM 147
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P + ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA
Sbjct: 148 NPGIG-----FILLVVVTATAGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGVYD 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + ++ Y+ I++ FI+ + +VY + +R+IP+ YA R R +S
Sbjct: 203 VIQK--RESEYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQST 260
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILL 379
++PFK+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL
Sbjct: 261 HIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLL 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q +PDD++E LK+ G IP RPG TA +LKTVLSRI++ GS+FLA +
Sbjct: 321 VIMFAYVYTSVQFNPDDIAENLKKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAI 380
Query: 440 AAGPAVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P ++ + FRG GTSV+I V A + +++++ + Y I
Sbjct: 381 AVFPDLMSKIPIFAPFRGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|225621047|ref|YP_002722305.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|384209992|ref|YP_005595712.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
gi|189031319|gb|ACD74830.1| putative preprotein SecY translocase [Brachyspira hyodysenteriae
WA1]
gi|225215867|gb|ACN84601.1| preprotein translocase subunit SecY [Brachyspira hyodysenteriae
WA1]
gi|343387642|gb|AEM23132.1| preprotein translocase subunit SecY [Brachyspira intermedia PWS/A]
Length = 446
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 237/418 (56%), Gaps = 37/418 (8%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L + LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPTALLGFLSSSQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVLYL 205
QLL + P L+ +QK EGE+GRKK+ QY RY ++ IVQ+ G ++++
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLVLCIVQSAAMASWIQSINEGAMIFM 147
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P + ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA
Sbjct: 148 NPGIG-----FILLVVVTATAGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGVYD 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + ++ Y+ I++ FI+ + +VY + +R+IP+ YA R R +S
Sbjct: 203 VIQK--RESEYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQST 260
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILL 379
++PFK+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL
Sbjct: 261 HIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLL 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q +PDD++E LK+ G IP RPG TA +LKTVLSRI++ GS+FLA +
Sbjct: 321 VIMFAYVYTSVQFNPDDIAENLKKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAI 380
Query: 440 AAGPAVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P ++ + FRG GTSV+I V A + +++++ + Y I
Sbjct: 381 AVFPDLMSKIPIFAPFRGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|355575121|ref|ZP_09044688.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
gi|354817765|gb|EHF02260.1| preprotein translocase, SecY subunit [Olsenella sp. oral taxon 809
str. F0356]
Length = 426
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 244/418 (58%), Gaps = 16/418 (3%)
Query: 82 FKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLS----TLDSFSGGG 136
F+ P L K L G L L R G Y+P GV + + + S L+ FSGG
Sbjct: 9 FRIPELRKKILVTAGILLLYRFGAYLPAPGVPFASMLAAFQAAASSSGAIAVLNLFSGGA 68
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
+ R+ + SLGI+P+I AQI+ Q+ + P L +L K EGE+G++K+ QYTRY ++ A++
Sbjct: 69 LSRVSVFSLGIMPYITAQIILQMFQAVIPSLGELAK-EGESGQRKITQYTRYLTIVLALI 127
Query: 197 QAIGQVLYLRPYVNDFSTDWV------LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
A+G + + Y DFS L V +L G+ ++GE I+ +GNG SL+
Sbjct: 128 NAVGYLFLFKSYGIDFSAMGFPEMIENLIIVGVLLTGAIIIMWLGEVITQRGIGNGMSLI 187
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
IF +I++ LP S +V+ + I ++ I ++ IVY++ +R+IP+ YA R
Sbjct: 188 IFANIMAGLPHSLTASVSTS--TTGIIATVVTLLVIIAIIPVIVYIERGQRRIPVQYAKR 245
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGG 369
R ++ YLP KVN++GV+PIIF+++ L LP LA F + ++ A L+ G
Sbjct: 246 VVGRRVMGGQATYLPIKVNTAGVVPIIFASALLYLPAQLAVFFPNVRWIQGFANMLSSGV 305
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
++ +++LI FF Y+YT + +PD+ ++QL++ G IP VRPG +TAA++K+VL I+
Sbjct: 306 VNWV-LSVVLIVFFAYFYTAMVFNPDETADQLRKAGGFIPGVRPGSATAAYIKSVLDHIT 364
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ G++F+A LA P+++ T T + F GTSVLI+VG A DT ++++++ Y+
Sbjct: 365 LPGALFMAALAVVPSILFAVTGNTLMQAFGGTSVLIMVGVAMDTISQLESQLKMHNYE 422
>gi|319408745|emb|CBI82402.1| translocase SecY subunit precursor [Bartonella schoenbuchensis R1]
Length = 448
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 251/435 (57%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+FG F + L + L L + R G YI L G+N +A +Q++
Sbjct: 4 AAEQLASNINFGTFSRATELKKRIWFTLAALLVYRFGTYISLPGINIDALRQTFEQHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L ++ F+GG +GR+ I +LGI+P+I+A I+ QLL I P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLVNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSIIPSLESL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI+QA G + L V + + +++V L G+ F ++GE+
Sbjct: 123 YTRYVTVVLAILQAFGVAVALETGIGTGLQIVLEPGIMFRVSAVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ P++F + + A + D + L I++ I +V IV++
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANFPSTFAQLLTAHSQADLSTFLLIGIVLIIIFVVGFIVFI 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++G++P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQMFQSDMSHLPLKLNTAGIIPPIFASSLLLLPATINNFSDKM 302
Query: 357 A--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
++ + +L G Y+ L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWIQTISFSLGHGQPLYMIIYAALMAFFCFFYTAIVFNPSDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+V+G++++ ++ P + H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVVGAIYIILVCLLPEFMISALHVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|323490643|ref|ZP_08095848.1| preprotein translocase subunit SecY [Planococcus donghaensis
MPA1U2]
gi|323395735|gb|EGA88576.1| preprotein translocase subunit SecY [Planococcus donghaensis
MPA1U2]
Length = 431
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 244/416 (58%), Gaps = 25/416 (6%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVP 149
F LL L + R+G ++P+ V+ DQ L+ L++F GG + I ++GI+P
Sbjct: 19 FFTLL-MLIIFRIGTFVPVPNVDASVLQAT-DQMGLVGFLNTFGGGALANFSILAMGIMP 76
Query: 150 FINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-----QVL 203
+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ A +QAIG +
Sbjct: 77 YITASIIVQLLQMDVVPKFAEWAK-QGEVGRRKLAQFTRYFTIVLAFIQAIGMSYGFNQM 135
Query: 204 YLRPYV-NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
Y + ND + +V+ ++ +LT G+AF ++GE+I+ +GNG S++IF I++ +P +
Sbjct: 136 YGGSLIQNDTISTYVVIAI-VLTGGTAFLLWLGEQITAKGVGNGISIIIFAGIVAAIPGA 194
Query: 263 FGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+ A+ Q N +A + ++ + + + ++YVQ+A RKIPI YA R R
Sbjct: 195 INQLYAQQIQGAGDQLPINLAIMALLALAVVAITVLVIYVQQALRKIPIQYAKRVAGRGQ 254
Query: 317 GLQ-RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
+ +LP KVN++GV+P+IF+ + + P T+A F G A +A + + P
Sbjct: 255 STSGQQTHLPLKVNAAGVIPVIFAVAFIITPQTIASFFGANAFTEA---IQNTFDYTRPV 311
Query: 376 NIL----LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
++ LI F Y+Y F+Q++P++VS+ LK+QGA IP +RPGK+T +L +VL R++ +
Sbjct: 312 GMIIYVALIVAFTYFYAFIQVNPENVSDNLKKQGAYIPGIRPGKNTQDYLTSVLYRLTFV 371
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G++FLAI+A P +L GTS+LI+VG A +T ++++++++ + YK
Sbjct: 372 GAIFLAIIAVLPIFFINVANLPQSAQIGGTSLLIVVGVALETMKQLESQLVKRHYK 427
>gi|395786472|ref|ZP_10466199.1| preprotein translocase, SecY subunit [Bartonella tamiae Th239]
gi|423716635|ref|ZP_17690825.1| preprotein translocase, SecY subunit [Bartonella tamiae Th307]
gi|395422770|gb|EJF88966.1| preprotein translocase, SecY subunit [Bartonella tamiae Th239]
gi|395428709|gb|EJF94784.1| preprotein translocase, SecY subunit [Bartonella tamiae Th307]
Length = 448
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 252/437 (57%), Gaps = 20/437 (4%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVN----REAFVGNLDQ 122
AA S+++FG F + L + LG L + RLG YIPL G+N R+AF GN
Sbjct: 4 AAEQLASNMNFGAFSRATELKKRIWFTLGALLVYRLGTYIPLPGINSDVLRQAFEGN--S 61
Query: 123 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKV 182
+ LL + F+GG +GR+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE+GRK +
Sbjct: 62 SGLLGMFNMFAGGAVGRMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGESGRKII 120
Query: 183 LQYTRYASVGFAIVQAIGQVLYL-------RPYVNDFSTDWVLTSVTLLTLGSAFTTYIG 235
QYTRY +V AI+QA G L + +V + + +T+V L G+ F ++G
Sbjct: 121 NQYTRYGTVLLAILQAYGLAFVLESGFDSGQQFVTNPGMFFRITTVITLVGGTVFLMWLG 180
Query: 236 ERISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIV 294
E+I+ +GNG SL I+ I++ LP + + + A + D + + L I++ + ++ IV
Sbjct: 181 EQITSRGVGNGISLFIYAGIVANLPVAIAQLLTAHSSADLSTLMLLVIVVMVVAILAVIV 240
Query: 295 YVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG 354
+ + A+R+I I Y R +++LP K+N++G++P IF++S L LPG L +
Sbjct: 241 FFERAQRRILIQYPKRQVGNRMFQGDTSHLPLKLNTAGIIPAIFASSLLMLPGMLNDMSE 300
Query: 355 IAA--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
++ AA + G Y+ LIAFF ++YT + +P D ++QLK+ IP +R
Sbjct: 301 NMPQWVQTAAYLFSHGQPLYMLLYGSLIAFFCFFYTAIVFNPKDTADQLKKHSGFIPGIR 360
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G++++ + P ++ + F G GTS+LI+V D
Sbjct: 361 PGERTAEYIDYVLTRITVVGAIYIVAVCLMPELLMARLGVPLFLG--GTSLLIVVTVTLD 418
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +++ +Y+ +
Sbjct: 419 TISQIQGHLVAHQYEGL 435
>gi|338975019|ref|ZP_08630374.1| preprotein translocase secY subunit [Bradyrhizobiaceae bacterium
SG-6C]
gi|414167331|ref|ZP_11423560.1| preprotein translocase, SecY subunit [Afipia clevelandensis ATCC
49720]
gi|338231618|gb|EGP06753.1| preprotein translocase secY subunit [Bradyrhizobiaceae bacterium
SG-6C]
gi|410891148|gb|EKS38946.1| preprotein translocase, SecY subunit [Afipia clevelandensis ATCC
49720]
Length = 443
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 249/433 (57%), Gaps = 15/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAF--VGNLDQNS 124
AA ++++F F K L + LG L + RLG Y+PL G++ + +
Sbjct: 4 AAEQLAANLNFSAFAKADELKKRIWFTLGALLVYRLGTYVPLPGIDPNVWSQIFKSQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GGGI R+ I +L I+P+I+A I+ QLL ++P+L+ L K+EGE+GRK + Q
Sbjct: 64 ILGMFNMFAGGGINRMAIFALNIMPYISASIILQLLTTVSPQLEAL-KKEGESGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLR---PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V A QA G + L V+D + L++ L G+ F ++GE+I+
Sbjct: 123 YTRYLTVVLATFQAYGIAVGLEGAGNVVSDPGLFFRLSTTITLVGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEA 299
+GNG SL+I + I++ LP++ T+ Q + LA II++ ++ L IV+V+ A
Sbjct: 183 GIGNGISLIIMSGIVAELPSAIAGTLELGRQGALSTVLILAIIIMAVAVIAL-IVFVERA 241
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIA 356
+R++ I Y R +S++LP K+N+SGV+P IF++S L LP T+A+F G
Sbjct: 242 QRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTIAQFNAGKGPE 301
Query: 357 ALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
+ L G +L + LI FF ++YT + +P + ++ LK+ G IP +RPG+
Sbjct: 302 WFQWLTTQLAHGRPLFLVLYLGLIVFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGER 361
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VLSRI+V+G+++LA++ P ++ + + G GTS+LI+V DT +
Sbjct: 362 TAEYIDYVLSRITVIGAIYLAVVCLVPEILISYASVPFYLG--GTSLLIVVSVTMDTVAQ 419
Query: 477 VQAEIISQKYKNI 489
VQ +++ +Y+ +
Sbjct: 420 VQGYLLAHQYEGL 432
>gi|381208351|ref|ZP_09915422.1| preprotein translocase subunit SecY [Lentibacillus sp. Grbi]
Length = 430
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 246/425 (57%), Gaps = 31/425 (7%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGIC 143
G + K + L L + RLG +IP+ NREA + ++Q ++ L++F GG + I
Sbjct: 12 GDIRRKIIFTLLMLIVFRLGTFIPVPYTNREA-IDFMNQQNVFGFLNTFGGGALQNFSIF 70
Query: 144 SLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI--- 199
++GI+P+I A I+ QLL + PK + KR+GE GRKK+ Q TRY ++ A VQAI
Sbjct: 71 AMGIMPYITAAIIMQLLQMDVVPKFTEW-KRQGEMGRKKIAQVTRYGTILLAFVQAIAMS 129
Query: 200 -------GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
G +L P V F L +LT G+AF ++GE+I+ +GNG S+LIF
Sbjct: 130 IGFNAMAGGMLISEPSVWKF-----LIIAIVLTSGTAFLMWLGEQITANGVGNGISILIF 184
Query: 253 TSIISYLPASFGRTVAEAFQD-GNYIGLATIIISFILLVLGI-----VYVQEAERKIPIN 306
I+S +P + ++ F D G+ + + +I++ I LV+ +++Q+A RKIPI
Sbjct: 185 AGIVSAVPNGVNQLYSQYFVDAGDELFINIVIVALIALVVVAVTVGVIFIQQALRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN 366
YA + +RS S +LP KVN++GV+P+IF+ + + P T+A G+ + A +
Sbjct: 245 YAKKLVNRSPVGGHSTHLPLKVNAAGVIPVIFAIAFIIAPRTIA---GLFEGNEIAATIE 301
Query: 367 PGGSFYLPTNIL----LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 422
+ P ++ LI F Y+YTF+Q++P+ ++E L++QG IP +RPG++T +L
Sbjct: 302 SIFDYTQPVGMVIYVGLIIAFTYFYTFVQVNPEQMAENLQKQGGYIPGIRPGRNTETYLT 361
Query: 423 TVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEII 482
V+ R++ +GS+FLA ++ P V+ +L GTS+LI+VG A T ++++++++
Sbjct: 362 RVMYRLTFVGSIFLAAVSVLPIVLGGLANLPQAVQIGGTSLLIVVGVALQTMKQLESQLV 421
Query: 483 SQKYK 487
+ YK
Sbjct: 422 KRHYK 426
>gi|296126885|ref|YP_003634137.1| preprotein translocase subunit SecY [Brachyspira murdochii DSM
12563]
gi|296018701|gb|ADG71938.1| preprotein translocase, SecY subunit [Brachyspira murdochii DSM
12563]
Length = 446
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 237/418 (56%), Gaps = 37/418 (8%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
R+G +IP G++ A +G L + LL+ +D FSGG + R I +LGI+P+I+A I+
Sbjct: 29 RIGSHIPTPGIDPAALLGFLSSSQGGAGLLTIMDLFSGGALFRFSILALGIMPYISASII 88
Query: 157 FQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVLYL 205
QLL + P L+ +QK EGE+GRKK+ QY RY ++ IVQ+ G ++++
Sbjct: 89 MQLLGVVIPALERMQK-EGESGRKKINQYVRYLTLVLCIVQSAAMASWIQSINEGAMIFM 147
Query: 206 RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
P + ++L V T G+ F ++G++I++ LGNG S++IF I++ +PA
Sbjct: 148 NPGIG-----FILLVVVTATAGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGVYD 202
Query: 266 TVAEAFQDGNYIGLATIIISFILLVLG---IVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + ++ Y+ I++ FI+ + +VY + +R+IP+ YA R R +S
Sbjct: 203 VIQK--RESEYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQST 260
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK--KAAVALNPGGSF-YLPTNILL 379
++PFK+N SGV+PIIF+++ +A+P +A T + A + GS+ Y+ LL
Sbjct: 261 HIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLL 320
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q +PDD++E LK+ G IP RPG TA +LKTVLSRI++ GS+FLA +
Sbjct: 321 VIMFAYVYTSVQFNPDDIAENLKKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAI 380
Query: 440 AAGPAVIEQTTHLTAFRG--------FAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
A P ++ + FRG GTSV+I V A + +++++ + Y I
Sbjct: 381 AVFPDLMSKIPIFAPFRGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGI 438
>gi|167626786|ref|YP_001677286.1| preprotein translocase subunit SecY [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|254875916|ref|ZP_05248626.1| preprotein translocase subunit secY [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|167596787|gb|ABZ86785.1| preprotein translocase, subunit Y, membrane protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254841937|gb|EET20351.1| preprotein translocase subunit secY [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 441
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 252/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMGLFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + + A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLGWFADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|416032635|ref|ZP_11572903.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347999818|gb|EGY40632.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 436
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 248/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF II+ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIIAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I + + + +V+V+ +R+I + YA R + G
Sbjct: 198 PAAIGQTIEQARLGQMHLLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGKQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 376 GLYVTFVCLVPYIMTAAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|225076415|ref|ZP_03719614.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
gi|224952263|gb|EEG33472.1| hypothetical protein NEIFLAOT_01460 [Neisseria flavescens
NRL30031/H210]
Length = 437
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 244/422 (57%), Gaps = 17/422 (4%)
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
FGD K + + LLG L + R+G +IP+ GV+ A + N + L+ FSG
Sbjct: 12 KFGDLKK-----RLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSG 66
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + R I ++GI+P+I+A I+ QL ++I P L+ L K+EGEAGRK + +YTRY +V A
Sbjct: 67 GSLERFSIFAIGIMPYISASIIVQLASEIVPSLKAL-KKEGEAGRKIITKYTRYGTVLLA 125
Query: 195 IVQAIG--QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
++Q+ G +Y + V S ++ +++V L G+ F ++GE+I++ +GNG SL+I
Sbjct: 126 VLQSFGVATFVYQQGVVVTSSLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIIT 185
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAERKIPINYASRY 311
I+S +P+ R + Q + +A +I+I +LL+ +VY + A+RK+P++YA R
Sbjct: 186 AGIVSGIPSGIVRMLTLTEQGSMSMLMAVSIVIGILLLIYAVVYFESAQRKVPVHYAKRQ 245
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA----LKKAAVALNP 367
+S ++PFK+N +GV+P IF++S + P TL + G + L K A L
Sbjct: 246 FGSGMMPGQSIHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSFLHKVAAMLQH 305
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G S Y+ I FF Y+YT L P +++E LK+ GA +P +RPG+ T+ +L+ V+ R
Sbjct: 306 GQSLYIILFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLR 365
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ G++++ + P + TT L GTS+LILV D ++ + +S +Y+
Sbjct: 366 LTLFGALYITTICLIPEFL--TTALKVPFYLGGTSLLILVVVTMDFRTQINSYRMSSQYE 423
Query: 488 NI 489
++
Sbjct: 424 DL 425
>gi|297192683|ref|ZP_06910081.1| preprotein translocase subunit secY [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721662|gb|EDY65570.1| preprotein translocase subunit secY [Streptomyces pristinaespiralis
ATCC 25486]
Length = 439
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 245/437 (56%), Gaps = 33/437 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD-----QNSLLSTLDS 131
F FK P L K L L + L RLG +IP+ GV+ + +D NSL ++
Sbjct: 5 FARAFKTPDLRKKLLFTLAIIVLYRLGSHIPVPGVSYQNVQICVDAATKGNNSLFGLVNM 64
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 FSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTV 123
Query: 192 GFAIVQAIGQVLYLR--------PYVNDFSTDW-VLTSVTL---LTLGSAFTTYIGERIS 239
A++Q G V R P N+ D + T++ + +T G+A ++GE I+
Sbjct: 124 ALAVLQGTGLVATARSGALFASCPVGNEIVPDRSIFTTIVMVVTMTAGTAAVMWLGELIT 183
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEA 299
D +GNG S+L+F SI + P + +I T+I+ ++V +V+V++A
Sbjct: 184 DRGIGNGMSILMFISIAAGFPGALWAIKESGKLAQGWIEFGTVILIGFVMVGLVVFVEQA 243
Query: 300 ERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALK 359
+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F+ +
Sbjct: 244 QRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFSNSQSGW 303
Query: 360 KAAVA---LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
K + + +Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R G+
Sbjct: 304 KTWIEAHFVKGDHPYYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRP 363
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCA 470
TA +L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG
Sbjct: 364 TAEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILIIVGVG 418
Query: 471 TDTARKVQAEIISQKYK 487
+T +++++++ + Y+
Sbjct: 419 LETVKQIESQLQQRNYE 435
>gi|335040777|ref|ZP_08533899.1| preprotein translocase, SecY subunit [Caldalkalibacillus thermarum
TA2.A1]
gi|334179352|gb|EGL81995.1| preprotein translocase, SecY subunit [Caldalkalibacillus thermarum
TA2.A1]
Length = 428
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 238/409 (58%), Gaps = 27/409 (6%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNL-DQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQI 155
L + R+G +IP+ VN V NL DQ ++L + GG + R I ++G++P+I A I
Sbjct: 25 LIIFRIGAFIPVPNVNPN--VINLYDQANVLGIISILGGGALERFSIFAMGVMPYITASI 82
Query: 156 VFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-----LYLRPYV 209
+ QLL + PK REGEAGR+K+ Q TRY +V A VQAIG L+ V
Sbjct: 83 IVQLLTMDVIPKFAQ-WAREGEAGRRKLAQVTRYGTVVLAFVQAIGMSIGFNNLFPGLVV 141
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
N ++ +V +LT G+ F ++GE+I++ +GNG S+LIF I++ +P+ +
Sbjct: 142 NPGLGTYLYIAV-ILTAGTTFLMWLGEQITEKGIGNGISILIFAGIVAAIPSGLNQIYLS 200
Query: 270 AFQDGNYI---GLATIIISFILL--VLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
F +G I L +I++ ++L V+G++Y+Q+ RKIP+ YA R R +S ++
Sbjct: 201 EFGEGANIFFGVLKVVILALVVLAIVVGVIYIQQGVRKIPVQYAKRVVGRRMYGGQSTHI 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN------PGGSFYLPTNIL 378
P KVN++GV+P+IF+ S + P T+A F A A +N P G F+ ++
Sbjct: 261 PLKVNAAGVIPVIFAMSLIFFPPTIAMF--FAGNPIADWVINHFDYTSPIGMFFY---VI 315
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI F Y+YTF+Q++P ++E +K+ G IP +RPGK+T+ +L +L+RI++ G++FLA
Sbjct: 316 LIIGFTYFYTFVQINPIQMAENMKKHGGYIPGIRPGKTTSTYLTRILNRITLAGALFLAA 375
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ P L GT++LI+VG A +T ++V ++++ + YK
Sbjct: 376 VSILPVFFSALATLPPTVTIGGTALLIVVGVALETMKQVNSQLVKRHYK 424
>gi|374603280|ref|ZP_09676262.1| preprotein translocase subunit SecY [Paenibacillus dendritiformis
C454]
gi|374391149|gb|EHQ62489.1| preprotein translocase subunit SecY [Paenibacillus dendritiformis
C454]
Length = 431
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 237/407 (58%), Gaps = 21/407 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L + R+G ++P+ GV+ F L L++FSGG + + I +LGI P+I A I+
Sbjct: 25 LIVYRIGSFVPVPGVDTSVFANANQGTELFGFLNTFSGGALFKFSIFALGIFPYITASII 84
Query: 157 FQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-----LY-LRPYV 209
QLL + PK + K EGE G+KK+ Q TRY +V ++QA G LY L
Sbjct: 85 MQLLTMDVVPKFAEWAK-EGEVGKKKIAQMTRYGTVVLGLIQAFGTAIGFNRLYGLELVP 143
Query: 210 NDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAE 269
N D++L ++ +LT G+AF ++GE+I++ +GNG S++IF+ I+S +P
Sbjct: 144 NATYADYILIAI-VLTAGTAFLMWLGEQITEKGIGNGISIIIFSGIVSGIPTHIQEIAQS 202
Query: 270 AFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
F DGN I + I + +L+++G++Y+Q+ RKIP+ YA R ++ ++
Sbjct: 203 QFIDGNQLFLNIIKMIIIALFIVLIIVGVIYIQQGNRKIPVQYAKRVVGNKMYGGQNTHI 262
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL----NPGGSFYLPTNILLI 380
P KVN +GV+P+IF++S L P T+A+F A K + P G + +L+I
Sbjct: 263 PLKVNGAGVIPVIFASSLLMFPATIAQFWADKAWAKWIITHMMIDKPLG---MVLYVLMI 319
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
F ++YTF+QL+P +++Q+K+ G IP +RPGK+TA +L V++RI++ G++FLA+++
Sbjct: 320 IGFTFFYTFVQLNPQQMADQMKKNGGYIPGIRPGKATATYLTRVMTRITLAGAIFLAVVS 379
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
P L GTS+LI+VG A DT +++++++I + YK
Sbjct: 380 IIPVFFGSLAGLPRSVQIGGTSLLIVVGVALDTMKQIESQLIKRHYK 426
>gi|389878469|ref|YP_006372034.1| preprotein translocase subunit SecY [Tistrella mobilis
KA081020-065]
gi|388529253|gb|AFK54450.1| preprotein translocase, SecY subunit [Tistrella mobilis
KA081020-065]
Length = 447
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 242/430 (56%), Gaps = 19/430 (4%)
Query: 75 SIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDS 131
S++F F K L + LG L + RLG YIP+ G+N +QN+ +L +
Sbjct: 11 SLNFAAFGKATELKKRLWFTLGALLVYRLGTYIPVPGINPAVLADVFNQNAGGILGMFNV 70
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
F+GG +GR+ I +L ++P+I+A I+ QLL + P L K+EGE+GRK + QYTRY +V
Sbjct: 71 FAGGALGRMTIFALTVMPYISASIIVQLLTAVLPSFAAL-KKEGESGRKLLNQYTRYGTV 129
Query: 192 GFAIVQAIGQVLYLR-------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLG 244
AIVQA G + L V D + +V L G+ F ++GE+I+ +G
Sbjct: 130 ALAIVQAYGISVGLEGLQAGGMSAVADPGAYFRAATVITLVGGTMFLMWLGEQITARGVG 189
Query: 245 NGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIG--LATIIISFILLVLGIVYVQEAERK 302
NG SL+IFT I++ LP + R + G LA +I+S ++ IV+++ A+R+
Sbjct: 190 NGISLIIFTGIVAELPGALARMLELGRTGALSTGFILALLIMSVAVITF-IVFMERAQRR 248
Query: 303 IPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT---GIAALK 359
I + Y R S++LP K+N++GV+P IF++S L LP T+A F G A L
Sbjct: 249 IVVQYPKRQVGNRIYGGESSHLPLKLNTAGVIPPIFASSILLLPTTIASFNATGGPAWLT 308
Query: 360 KAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA 419
L G YL + I FF ++YT + +P++ ++ L++ G IP +RPGK+TA
Sbjct: 309 WLTANLAHGQPLYLALYVGAILFFCFFYTAIVFNPEETADNLRKHGGFIPGIRPGKNTAD 368
Query: 420 FLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQA 479
+L VL+R++V+G+ ++A + A P ++ + + F GTS+LI+V DT ++Q+
Sbjct: 369 YLDHVLTRLTVIGAAYIAAVCALPEILISEYSVPFY--FGGTSLLIVVNVTIDTVAQIQS 426
Query: 480 EIISQKYKNI 489
+++ +Y+ +
Sbjct: 427 HLLAHQYEGL 436
>gi|161611306|ref|YP_007429.2| preprotein translocase subunit SecY [Candidatus Protochlamydia
amoebophila UWE25]
Length = 456
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 234/419 (55%), Gaps = 30/419 (7%)
Query: 98 ALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRLGICSLGIVPFIN 152
A+ RLG +IP+ G+N E V +L +D FSGG ++ + +LG+ P+I+
Sbjct: 26 AVCRLGSFIPVPGINGEVAVSFFRHATGGSQNLFQMVDIFSGGAFSQMTVIALGVTPYIS 85
Query: 153 AQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG------QVLYLR 206
A I+ QLL + P LQ + G+AG++K+ ++TR+ ++ + +Q+ Q+ R
Sbjct: 86 ASIIMQLLVALVPSLQRDLRENGDAGKRKINRWTRFLTIVLSFLQSALFAKYALQINLSR 145
Query: 207 P--------YVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
P + F W+ L ++ +T G+ F ++GE+I++ +GNG SL+I I+
Sbjct: 146 PGIVAGELLDITAFGLPWLFYLITIATMTTGTMFLMWVGEQITERGIGNGISLIICLGIL 205
Query: 257 SYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
S +P + G + D N+ + +I F+++ L + V + R+IP+ +A R
Sbjct: 206 SQIPTAMGLIFQQLNLDSQEPGQMNFSTILVLISVFVVVTLATILVIQGHRRIPLQHARR 265
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-LKKAAVALNPGG 369
R S+Y+P K+N +GV+P+IF++S L P TL F G L + A L+PGG
Sbjct: 266 VVGRKEVQGGSSYIPLKINYAGVIPVIFASSLLMFPATLGTFVGRGNWLGEVANWLSPGG 325
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
YL + LI FF Y++T Q PD ++ +K+ GA IP +R GK T +L++ ++R++
Sbjct: 326 PLYLVLFVALIIFFTYFWTATQFRPDQIASDMKKNGAFIPGIRQGKPTQDYLESTMNRVT 385
Query: 430 VLGSVFLAILAAGPAVIEQTTHL--TAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
+LG+VFLA++A P +I + T F GT++LILVG DT ++V++ ++ ++Y
Sbjct: 386 LLGAVFLALIAILPTMIGSVLGVPPTISYFFGGTALLILVGVVLDTMKQVESHLLMKRY 444
>gi|404420705|ref|ZP_11002440.1| preprotein translocase subunit SecY [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403659744|gb|EJZ14370.1| preprotein translocase subunit SecY [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 441
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 242/426 (56%), Gaps = 32/426 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS------LLSTLDSFSGGGIGRLGI 142
K L LG + L R G IP GVN ++Q S + S ++ FSGG + +L +
Sbjct: 17 KILFTLGLVILYRAGASIPSPGVNYPNVQKCIEQVSGGDSAQIYSLINLFSGGALLQLTV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++G++P+I A I+ QLL + P+ + LQK EG+AG+ K+ QYTRY S+ AI+QA V
Sbjct: 77 FAVGVMPYITASIIVQLLVVVIPRFEQLQK-EGQAGQAKMTQYTRYLSIALAILQATSIV 135
Query: 203 LYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
+ D S ++ V ++T G+A ++GE I++ +GNG SLLIF
Sbjct: 136 ALAANGGLLQGCSLDIIQDSSVFGLIVIVLVMTAGAALVMWMGELITERGIGNGMSLLIF 195
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I + +P+ G+T+ E+ G + ++ + +L+++G+V+V++ +R+IP+ YA R
Sbjct: 196 AGIAARIPSE-GQTILES--RGGLV-FTAVVAATLLIIVGVVFVEQGQRRIPVQYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF---------TGIAALKKAAV 363
R S YLP KVN +GV+P+IF++S + +P + + TG A
Sbjct: 252 GRKMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIQSGSSNPGTGWWDKFVADY 311
Query: 364 ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKT 423
NP Y+ LI FF Y+Y + +PD+ ++++K+ G IP +RPGK TA +L+
Sbjct: 312 LTNPADPVYIAIYFGLIVFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGKPTADYLRY 371
Query: 424 VLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQAEI 481
VLSRI++ GS++L ++A P + Q + + + F GT+VLI++G DT +++++++
Sbjct: 372 VLSRITLPGSIYLGVIAVLPNMFLQIGNTGSVQNLPFGGTAVLIMIGVGLDTVKQIESQL 431
Query: 482 ISQKYK 487
+ + Y+
Sbjct: 432 MQRNYE 437
>gi|15612717|ref|NP_241020.1| preprotein translocase subunit SecY [Bacillus halodurans C-125]
gi|12643276|sp|P38375.2|SECY_BACHD RecName: Full=Protein translocase subunit SecY
gi|4512424|dbj|BAA75291.1| secY [Bacillus halodurans]
gi|10172766|dbj|BAB03873.1| preprotein translocase subunit [Bacillus halodurans C-125]
Length = 430
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 241/423 (56%), Gaps = 21/423 (4%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
F G L K + L L + R+G +IP+ G NRE + +DQ + L++F GG +G
Sbjct: 9 FRVGDLRRKVIFTLLMLIVFRIGSFIPVPGTNREV-LDFVDQANAFGFLNTFGGGALGNF 67
Query: 141 GICSLGIVPFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
I ++GI+P+I A IV QLL + PK + K EGEAGR+K+ Q+TRY ++ +QA+
Sbjct: 68 SIFAMGIMPYITASIVMQLLQMDVVPKFAEWAK-EGEAGRRKLAQFTRYGTIVLGFIQAL 126
Query: 200 GQVL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
G + + + + S L +LT G+AF ++GE+I+ +GNG S++IF I
Sbjct: 127 GMSVGFNNFFPGLIPNPSVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGI 186
Query: 256 ISYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
+ +P + QD N + + + ++ + +++G+++VQ+A RKIP+ YA
Sbjct: 187 AAGIPNGLNLIYSTRIQDAGEQLFLNIVVILLLALAILAIIVGVIFVQQALRKIPVQYAK 246
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA----- 364
R R+ +S +LP KVN++GV+P+IF+ S P T+A G A V
Sbjct: 247 RLVGRNPVGGQSTHLPLKVNAAGVIPVIFALSLFIFPPTVAGLFGSDHPVAAWVIETFDY 306
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+P G + LLI F Y+YTF+Q++P+ ++E LK+QG IP +RPGK+T ++ +
Sbjct: 307 THPIG---MAVYALLIIGFTYFYTFIQVNPERMAENLKKQGGYIPGIRPGKATQTYITRI 363
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ +GS+FLA++A P + L GT +LI+VG A DT ++++A++I +
Sbjct: 364 LYRLTFVGSLFLAVVAILPVFFIKFADLPQAIQIGGTGLLIVVGVALDTMKQIEAQLIKR 423
Query: 485 KYK 487
YK
Sbjct: 424 SYK 426
>gi|416058065|ref|ZP_11580409.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000074|gb|EGY40873.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 441
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 249/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF II+ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIIAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I + +++ +V+V+ +R+I + YA R + G
Sbjct: 198 PAAIGQTIEQARLGQMHLLVLLLIAVIVLVVTYFVVFVERGQRRIKVEYAKRQQGKQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 376 GLYVTFVCLVPYIMTAAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|387120535|ref|YP_006286418.1| preprotein translocase subunit SecY [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415765296|ref|ZP_11482681.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416048090|ref|ZP_11576212.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416069574|ref|ZP_11583308.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429735165|ref|ZP_19269140.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993458|gb|EGY34815.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347999945|gb|EGY40753.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348653955|gb|EGY69616.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875027|gb|AFI86586.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429149980|gb|EKX92936.1| preprotein translocase, SecY subunit [Aggregatibacter
actinomycetemcomitans Y4]
Length = 441
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 248/416 (59%), Gaps = 18/416 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R I
Sbjct: 19 LKSRLLFVLGALIVFRIGSFIPVPGIDAAVLAQLIEQQKGTIIDMFNMFSGGALSRASIF 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLLA ++P L +L+K EGE+GR+K+ +YTRY++V A +QA+G
Sbjct: 79 ALGIMPYISASIIIQLLASVHPALAELRK-EGESGRRKISKYTRYSTVVLATLQAVGIST 137
Query: 204 ----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L V + + T+V L G+ F ++GE+I++ +GNG SL+IF II+ L
Sbjct: 138 GLPNMLPGLVPNLGFGFYFTAVISLVTGTMFLMWLGEQITERGIGNGISLIIFAGIIAGL 197
Query: 260 PASFGRTVAEA-FQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS--G 316
PA+ G+T+ +A + + L I + + + +V+V+ +R+I + YA R + G
Sbjct: 198 PAAIGQTIEQARLGQMHLLVLLLIAVIVLAVTYFVVFVERGQRRIKVEYAKRQQGKQILG 257
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFY 372
G S +LP KVN +GV+P IF++S + P TL ++ G + L ++ L+PG Y
Sbjct: 258 G--HSTHLPLKVNMAGVIPAIFASSIILFPATLTQWVGQGSSLEWLTDLSMLLHPGQPLY 315
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
L I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ +++R++++G
Sbjct: 316 LVVYASAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKIMTRLTLIG 375
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++ + P ++ ++ + F GTS+LI+V D ++Q+ ++S +Y++
Sbjct: 376 GLYVTFVCLVPYIMTAAWNVQFY--FGGTSLLIVVVVIMDFIVQIQSHLMSTRYES 429
>gi|95116540|gb|ABF56182.1| preprotein translocase SecY [Theobroma cacao]
Length = 128
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/128 (89%), Positives = 122/128 (95%)
Query: 174 EGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTY 233
EGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST WVL+SVT+LTLG+ TTY
Sbjct: 1 EGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTILTLGAVVTTY 60
Query: 234 IGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGI 293
IGERISDLKLGNGTSLLIFT+I+SYLPASFGRTV +A+QDGNYIGL TIIISF LLVLGI
Sbjct: 61 IGERISDLKLGNGTSLLIFTNILSYLPASFGRTVVQAYQDGNYIGLVTIIISFFLLVLGI 120
Query: 294 VYVQEAER 301
VYVQEAER
Sbjct: 121 VYVQEAER 128
>gi|302519640|ref|ZP_07271982.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|333026531|ref|ZP_08454595.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
gi|302428535|gb|EFL00351.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB78]
gi|332746383|gb|EGJ76824.1| putative preprotein translocase subunit SecY [Streptomyces sp.
Tu6071]
Length = 437
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 239/430 (55%), Gaps = 21/430 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + + RLG ++P+ GVN + +DQ + L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIDQANTNSGLFGLVNLF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I + I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGILPYITSSIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
A++Q G V R V D S + V +T G+A ++GE ++D
Sbjct: 124 LAVLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P S G +I T+I+ +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVILVGLVMVALVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +FT A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFTDSQASWA 303
Query: 361 AAVALNPGGSFYLPTNI---LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ N + P + LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWIRDNLADTSAWPHVVLYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A +L VL+RI+ GS++L ++A P + + F GTS+LI+VG +T +++
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVPTLALAGFGANSNFPFGGTSILIIVGVGLETVKQI 423
Query: 478 QAEIISQKYK 487
++++ + Y+
Sbjct: 424 ESQLQQRNYE 433
>gi|315453717|ref|YP_004073987.1| preprotein translocase subunit SecY [Helicobacter felis ATCC 49179]
gi|315132769|emb|CBY83397.1| preprotein translocase subunit SecY [Helicobacter felis ATCC 49179]
Length = 419
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 231/414 (55%), Gaps = 18/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
K LGYL L R+ YIP+ GV+ A D NS L + FSG + RL I SLG
Sbjct: 8 KIFITLGYLFLYRVLAYIPIPGVDLAAIKSFFDSNSSNALGLFNMFSGNAVSRLSIISLG 67
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I A I+ +LL+ P L ++K G +K +Q RYA++G I+QA+ LR
Sbjct: 68 IMPYITASIIMELLSATFPNLAKMKKERD--GMQKYMQIVRYATIGITIIQALSVSFGLR 125
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ T +L + ++LT G+ +IGE+I+ +GNG SL+IF I+S
Sbjct: 126 SIGHGPNGAIMVSMQTFLILATFSMLT-GTMLLMWIGEQITQRGVGNGISLIIFAGIVSG 184
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P++ T G N + L II + + I+YV+ AER+IPI+YA + ++
Sbjct: 185 IPSAIAGTF-NLVNTGVINVLVLIGIIAIVLATIFAIIYVELAERRIPISYARKVMMQNQ 243
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
+ Y+P K+N SGV+P IF+++ L P T+ + + L+ A LNP G Y
Sbjct: 244 NKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQASSNKVLQAIADFLNPHGYAYNILM 303
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LLI FF Y+Y+ + + D+++ LKR G I +RPG+ T+ FL TV SR++ GS++L
Sbjct: 304 FLLIIFFAYFYSSIVFNAKDIADNLKRNGGFIAGLRPGEGTSNFLNTVASRLTFWGSLYL 363
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
AI++ P ++ + + + F GT+VLI+V A DT +K++A+I KYK +
Sbjct: 364 AIISTLPWILVKAMGVPFY--FGGTAVLIVVQVAIDTMKKIEAQIYMGKYKTLS 415
>gi|294630913|ref|ZP_06709473.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
gi|292834246|gb|EFF92595.1| preprotein translocase, SecY subunit [Streptomyces sp. e14]
Length = 437
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 243/435 (55%), Gaps = 31/435 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F F+ P L K L LG + + R+G +IP+ GVN +A + + S L ++ F
Sbjct: 5 FARAFRTPDLRKKLLFTLGIIVVYRVGTHIPIPGVNYKAVQQCVTEASGNQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D + +T V +T G+A ++GE ++D
Sbjct: 124 LAILQGTGLVATARSGALFNGCSVAGNIVPDRAIFTTITMVICMTAGTAVVMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ G +I T+I+ +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWAIKKSGKLAGGWIEFGTVILVGLVMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G A K
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAGGNAGWK 303
Query: 361 AAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
V N Y+ LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWVTQNLTKGDHPIYITLYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFGASQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYK 487
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYE 433
>gi|262203555|ref|YP_003274763.1| preprotein translocase subunit SecY [Gordonia bronchialis DSM
43247]
gi|262086902|gb|ACY22870.1| preprotein translocase, SecY subunit [Gordonia bronchialis DSM
43247]
Length = 441
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 247/437 (56%), Gaps = 32/437 (7%)
Query: 78 FGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ------NSLLSTLDS 131
F F L K L ++G + L RLG IP GVN +A LD+ +S+ S ++
Sbjct: 6 FAAFRTPDLRKKILFVIGIIILYRLGATIPSPGVNYQAVRTCLDEVSRGDSSSVYSLINL 65
Query: 132 FSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASV 191
FSGG + +L + ++GI+P+I A I+ QLL + P+ + L+K EG++G+ K+ QYTRY +V
Sbjct: 66 FSGGALLQLSVFAIGIMPYITASIIVQLLTVVIPRFEQLRK-EGQSGQAKMTQYTRYLTV 124
Query: 192 GFAIVQAIGQVLY-----LRPYVNDFSTDWVLTS--------VTLLTLGSAFTTYIGERI 238
A++Q+ G V L P S++ + V ++T G+ + GE I
Sbjct: 125 ALALLQSTGIVALADRGQLLPSTCSTSSEVLANQNIFGLSIIVLVMTAGACLVMWFGELI 184
Query: 239 SDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQE 298
++ +GNG SLLIF I + +PA GRT+ + G + A + ++ +L+V G+V+V++
Sbjct: 185 TERGIGNGMSLLIFAGIAARIPAE-GRTILNS--RGGLV-FALVCVAALLIVAGVVFVEQ 240
Query: 299 AERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----G 354
+R+IP+ YA R R S YLP KVN +GV+P+IF++S L LP + T
Sbjct: 241 GQRRIPVQYAKRMVGRRMYGGSSTYLPLKVNQAGVIPVIFASSLLYLPQLIVELTRDPEK 300
Query: 355 IAALKKAAV--ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
+++ + NP Y+ +I FF Y+Y + +P++ ++ +K+ G IP +R
Sbjct: 301 VSSWQTWVTDHLANPSDWVYIAVYFGMIIFFTYFYVAVTFNPEERADDMKKYGGFIPGIR 360
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCA 470
PG+ TA +L VLSRI++ GS++L I+A P + + + + F GT+VLI+VG
Sbjct: 361 PGQPTADYLGYVLSRITLPGSIYLGIIAVLPNLFLEIGNSGGVQNLPFGGTAVLIMVGVG 420
Query: 471 TDTARKVQAEIISQKYK 487
DT ++V ++++ +KY+
Sbjct: 421 LDTMKQVNSQLMQRKYE 437
>gi|319639569|ref|ZP_07994316.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
gi|317399140|gb|EFV79814.1| preprotein translocase SECY subunit [Neisseria mucosa C102]
Length = 437
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 245/422 (58%), Gaps = 17/422 (4%)
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
FGD K + + LLG L + R+G +IP+ GV+ A + N + L+ FSG
Sbjct: 12 KFGDLKK-----RLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSG 66
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + R I ++GI+P+I++ I+ QL ++I P L+ L K+EGEAGRK + +YTRY +V A
Sbjct: 67 GSLERFSIFAIGIMPYISSSIIVQLASEIIPSLKAL-KKEGEAGRKIITKYTRYGTVLLA 125
Query: 195 IVQAIG--QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
++Q+ G +Y + V S ++ +++V L G+ F ++GE+I++ +GNG SL+I
Sbjct: 126 VLQSFGVATFVYQQGVVVTSSLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIIT 185
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAERKIPINYASRY 311
I+S +P+ R + Q + +A +I+I +LLV +VY + A+RK+P++YA R
Sbjct: 186 AGIVSGIPSGIVRLLTLTEQGSMSMLMAVSIVIGILLLVYAVVYFESAQRKVPVHYAKRQ 245
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI----AALKKAAVALNP 367
+S ++PFK+N +GV+P IF++S + P TL + G + L K A L
Sbjct: 246 FGSGMMPGQSIHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSILHKVAAMLQH 305
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y+ I FF Y+YT L P +++E LK+ GA +P +RPG+ T+ +L+ V+ R
Sbjct: 306 GQPLYIVLFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLR 365
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ G++++ + P + ++ + G GTS+LILV D ++ + ++S +Y+
Sbjct: 366 LTLFGALYITTICLIPEFLTTALNVPFYLG--GTSLLILVVVTMDFRTQINSYVMSSQYE 423
Query: 488 NI 489
++
Sbjct: 424 DL 425
>gi|392392101|ref|YP_006428703.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390523179|gb|AFL98909.1| protein translocase subunit secY/sec61 alpha [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 429
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 231/402 (57%), Gaps = 21/402 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+G +IP+ +N + L +L LD+FSGG R + +L I P+I A I+ QLL
Sbjct: 30 RIGAHIPIPFINHDVLSNMLGSGTLYDFLDTFSGGSFRRFSVFALSITPYITASIILQLL 89
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP--YVNDFSTDWV- 217
+ P L+ L K EGE GRKK+ QYTRY +V +Q G LR + +W+
Sbjct: 90 TIVIPSLERLAK-EGEFGRKKITQYTRYGTVILGFIQGFGMTFGLRGALIIPKAGMEWLI 148
Query: 218 -LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN- 275
L +LT G+AF ++GERI++ +GNG SL+IF I++ +P + R +A G
Sbjct: 149 YLLVALILTAGTAFLMWLGERITENGIGNGISLIIFAGIVAGVPDAIKR-IAGLLNVGEI 207
Query: 276 --YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGV 333
+ L I+I + ++ G+V++QE +R+I + YA R R +S+++P KVN +GV
Sbjct: 208 TLFSVLGLIVIG-LGIIAGVVFIQEGQRRIQVQYAKRVVGRRVYGGQSSHIPMKVNQAGV 266
Query: 334 MPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSF----YLPTNILLIAFFNY 385
+PIIF+ S LA P T+A + +G + +N GS YL +LI FF Y
Sbjct: 267 IPIIFAISLLAFPSTIATWMPSTSGYVQFVNKWLVMN--GSLTSIPYLIVYAMLIIFFTY 324
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
+YT + +P DV++ LK+ G IP +RPG++T+ +L +LSR+++ G FLA++A P++
Sbjct: 325 FYTAVSFNPVDVADNLKKYGGFIPGLRPGRATSDYLSKILSRLTLAGGTFLALIAVLPSL 384
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+ T + GTS+LI+V A +T +++++ ++ + Y+
Sbjct: 385 VIGLTGIPNIT-LGGTSLLIVVSVALETMKQLESMLMQRHYQ 425
>gi|322378761|ref|ZP_08053190.1| preprotein translocase subunit SecY [Helicobacter suis HS1]
gi|321148791|gb|EFX43262.1| preprotein translocase subunit SecY [Helicobacter suis HS1]
Length = 419
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/414 (35%), Positives = 232/414 (56%), Gaps = 18/414 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
K LGYL L R+ Y+P+ GV+ A D NS L + FSG + RL I SLG
Sbjct: 8 KIFITLGYLFLYRMLAYVPIPGVDLAAIKSFFDHNSSNALGLFNMFSGNAVSRLSIISLG 67
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I + I+ +LL+ P L ++K G +K +Q RYA++G ++QAI LR
Sbjct: 68 IMPYITSSIIMELLSATFPNLAKMKKERD--GMQKYMQIVRYATIGITVIQAISVSFGLR 125
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ T ++++ ++LT G+ +IGE+I+ LGNG SL+IF I+S
Sbjct: 126 SIGHGSNGAIMISMQTFLLISTFSMLT-GTMLLMWIGEQITQRGLGNGISLIIFAGIVSG 184
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P++ T G N + L I + + I+YV+ AER+IPI+YA + ++
Sbjct: 185 IPSAIAGTF-NLVNTGVINVLVLLGIFAIILATIFSIIYVELAERRIPISYARKVVMQNR 243
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
+ Y+P K+N SGV+P IF+++ L P T+ + + L+ A LNP G Y
Sbjct: 244 NKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQASSNKILQAIADFLNPHGYIYNVLM 303
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
LLI FF Y+Y+ + + D+++ LKR G I +RPG+ TA FL TV SR+++ GS++L
Sbjct: 304 FLLIIFFAYFYSSIVFNSKDIADNLKRNGGFIAGLRPGEGTANFLNTVASRLTLWGSLYL 363
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
A+++ P ++ + + + F GT+VLI+V A DT +K++A+I KYK +
Sbjct: 364 AVISTLPWILVKAMGVPFY--FGGTAVLIVVQVAIDTMKKIEAQIYMGKYKTLS 415
>gi|402813906|ref|ZP_10863500.1| protein translocase subunit SecY [Paenibacillus alvei DSM 29]
gi|402507753|gb|EJW18274.1| protein translocase subunit SecY [Paenibacillus alvei DSM 29]
Length = 432
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 242/416 (58%), Gaps = 22/416 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K L L L + R+G +IP+ GV+ F L S L++FSGG + + I +LGI+
Sbjct: 17 KILFTLMVLIVYRVGSFIPVPGVDTSVFATANQNTDLFSMLNTFSGGALFKFSIFALGIM 76
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL-YLR 206
P+I A I+ QLL+ + PK K EGE G++K+ Q TRY +V ++QA G + + R
Sbjct: 77 PYITASIIVQLLSMDVIPKFTQWAK-EGEVGKRKLSQITRYGTVILGLIQAFGTAIGFNR 135
Query: 207 PYVNDFS-----TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
Y D+VL ++ +LT G+AF +IGE+I++ +GNG S+LIF I++ +P
Sbjct: 136 MYGAQLVPGATFADYVLIAI-VLTAGTAFLMWIGEQITEKGIGNGISILIFAGIVAAIPI 194
Query: 262 SFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
G F D N + + I++ +L+V+G++Y+Q+ RKIP+ YA R
Sbjct: 195 HIGEIYRSQFADASGQMFLNIVKMIVIVLVIVLIVVGVIYIQQGNRKIPVQYAKRVVGNK 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAV---ALN-PGGSF 371
++ ++P KVN +GV+P+IF++S L P T+A+F + + LN P G F
Sbjct: 255 MYGGQNTHIPLKVNGAGVIPVIFASSLLMFPATIAQFWADKPWARWIIEHMGLNKPLGMF 314
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
+LLI F ++YTF+QL+P +++Q+K+ G IP +RPGK+TA +L V+SRI++
Sbjct: 315 LY---VLLIIGFTFFYTFVQLNPQQMADQMKKNGGYIPGIRPGKATATYLTRVMSRITLA 371
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
G++FLA ++ P L GTS+LI+VG A DT +++++++I + YK
Sbjct: 372 GAIFLAGVSILPVFFGALAGLPQSVQIGGTSILIVVGVALDTMKQIESQLIKRHYK 427
>gi|399528221|ref|ZP_10767875.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
gi|398361273|gb|EJN45048.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM39]
Length = 430
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 240/427 (56%), Gaps = 22/427 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF---VGNLDQNSLLSTLDSFS 133
F F+ P L K L L +A RLG +IP GV+ +A + Q SLL ++ FS
Sbjct: 5 FAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLVNLFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L I +LGI+P+I A I+ QLL + P+ DL K EG+ G+ K+ QYTRY ++
Sbjct: 65 GGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHK-EGQTGQAKLTQYTRYLTIFL 123
Query: 194 AIVQAI--------GQVLYLRPY--VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA GQ+ Y + D S + + ++ G+ ++GE I++ +
Sbjct: 124 GILQATTTISLARSGQLFQSCQYDIIKDRSVLTFIMMIIVMMAGTGVIMWLGELITERGI 183
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG SLLIFTSI + LP + Q G + +A I+ +L+ + +VYV++A+R+I
Sbjct: 184 GNGMSLLIFTSIAARLP----EQLLSIGQAGKWGSVAAIVALLLLVAIAVVYVEQAQRRI 239
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA 361
P+ YA R R + Y+P K+N SGV+P+IF++S LALP A+F ++
Sbjct: 240 PVQYAKRMIGRRQYGGTTTYIPLKINMSGVIPVIFASSILALPPMAAQFGKPDDQWVQWI 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ G +FYL L+ FF ++YT + +PD+V++ +K+ G IP R G+ TA +L
Sbjct: 300 SAHFTQGSTFYLTIYALMTLFFTFFYTAITFNPDEVADNMKKYGGFIPGYRAGRPTAEYL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAE 480
+ V++RI+ G+++L I+A P++ L++ + F GT++LI++G T +++ +
Sbjct: 360 RYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQMPFGGTTLLIIIGVGLQTVKEINTQ 419
Query: 481 IISQKYK 487
+ Y+
Sbjct: 420 LQQHHYE 426
>gi|396585501|ref|ZP_10485910.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
gi|395546702|gb|EJG14286.1| preprotein translocase, SecY subunit [Actinomyces sp. ICM47]
Length = 430
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 241/427 (56%), Gaps = 22/427 (5%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAF---VGNLDQNSLLSTLDSFS 133
F F+ P L K L L +A RLG +IP GV+ +A + Q SLL ++ FS
Sbjct: 5 FAQAFRTPDLRRKLLFTLFIMAAFRLGSFIPTPGVDSQAVQRCMAQESQASLLDLVNLFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + +L I +LGI+P+I A I+ QLL + P+ DL K EG+ G+ K+ QYTRY ++
Sbjct: 65 GGALLQLSIFALGIMPYITASIIIQLLRVVIPRFDDLHK-EGQTGQAKLTQYTRYLTIFL 123
Query: 194 AIVQAIGQVLYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKL 243
I+QA + R P + D + + + ++ G+ ++GE I++ +
Sbjct: 124 GILQATTTISLARSGQLFQSCSEPVIRDQTVLTFIMMIIVMMAGTGVIMWLGELITERGI 183
Query: 244 GNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKI 303
GNG SLLIFTSI + LP + Q G + +A I+ +++ + +VYV++A+R+I
Sbjct: 184 GNGMSLLIFTSIAARLP----EQLLSIGQAGKWGSVAAIVALLLVVAIAVVYVEQAQRRI 239
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA 361
P+ YA R R + Y+P K+N +GV+P+IF++S LALP +A+F A ++
Sbjct: 240 PVQYAKRMIGRRQYGGTTTYIPLKINMAGVIPVIFASSILALPPMIAQFGKPQDAWVQWI 299
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+ G +FYL L+ FF ++YT + +PD+V++ +K+ G IP R G+ TA +L
Sbjct: 300 SGHFTQGSTFYLTIYSLMTLFFAFFYTAITFNPDEVADNMKKYGGFIPGYRAGRPTAEYL 359
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFR-GFAGTSVLILVGCATDTARKVQAE 480
+ V++RI+ G+++L I+A P++ L++ + F GT++LI++G T +++ +
Sbjct: 360 RYVINRITSAGALYLVIIALLPSLAIIPLKLSSSQMPFGGTTLLIIIGVGLQTVKEINTQ 419
Query: 481 IISQKYK 487
+ Y+
Sbjct: 420 LQQHHYE 426
>gi|451940792|ref|YP_007461430.1| preprotein translocase subunit SecY [Bartonella australis Aust/NH1]
gi|451900179|gb|AGF74642.1| preprotein translocase subunit SecY [Bartonella australis Aust/NH1]
Length = 448
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 247/435 (56%), Gaps = 16/435 (3%)
Query: 68 AAAMEDSSIDFGDFFKG-PLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS-- 124
AA S+I+ G F + L + L L + R G YI L G+N +A + ++
Sbjct: 4 AAEQLASNINLGTFSRATELKKRIWFTLSALLVYRFGTYISLPGINIDALRQTFEHHASG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG +GR+ I +LGI+P+I+A I+ QLL + P L+ L K+EGE GRK + Q
Sbjct: 64 VLGLFNMFAGGAVGRMAIFALGIMPYISASIIVQLLTSVVPSLEAL-KKEGELGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP-------YVNDFSTDWVLTSVTLLTLGSAFTTYIGER 237
YTRY +V AI QA G + L VN+ + ++SV L G+ F ++GE+
Sbjct: 123 YTRYVTVILAIFQAFGIAVALETGIGTGLQIVNEPGMMFRISSVITLVGGTMFLMWLGEQ 182
Query: 238 ISDLKLGNGTSLLIFTSIISYLPASFGRTV-AEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+ +GNG SL+IFT I++ PA+F + + A + D L III I +V IV+V
Sbjct: 183 ITSRGVGNGVSLIIFTGIVANFPATFAQLLTAHSHSDLPTFLLIGIIIIAISVVGVIVFV 242
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R+I I Y R ++LP K+N++GV+P IF++S L LP T+ F+
Sbjct: 243 ERAQRRILIQYPKRQVGNQIFQGDMSHLPLKLNTAGVIPPIFASSLLLLPATINNFSDKM 302
Query: 357 ALKKAAVA--LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
A++ L G Y+ +L+AFF ++YT + +P D ++QLK+ IP +RPG
Sbjct: 303 PQWVQAISSSLAHGQPLYMIIYAVLMAFFCFFYTAIVFNPRDTADQLKKHSGFIPGIRPG 362
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTA 474
+ TA ++ VL+RI+VLG+V++ ++ P + H+ + G GTS+LI+V DT
Sbjct: 363 ERTAEYIDYVLTRITVLGAVYIILVCLLPEFMVSAFHVPFYLG--GTSLLIVVTVTLDTV 420
Query: 475 RKVQAEIISQKYKNI 489
++Q +++ +Y+ +
Sbjct: 421 AQIQGHLVAHQYEGL 435
>gi|296534007|ref|ZP_06896523.1| preprotein translocase subunit SecY [Roseomonas cervicalis ATCC
49957]
gi|296265673|gb|EFH11782.1| preprotein translocase subunit SecY [Roseomonas cervicalis ATCC
49957]
Length = 455
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 239/413 (57%), Gaps = 24/413 (5%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLGIVPFI 151
L L + R+G YIP+ GV+ L Q+ +L D F+GG +GR+ + +L I+P+I
Sbjct: 31 LAALIVYRIGTYIPVPGVDASVMAEILRQHGSGILGMFDMFTGGALGRMTVFALNIMPYI 90
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR----- 206
+A I+ QL+ P L+ L K+EGE+GRKK+ QYTRY +V A+ QA G + L
Sbjct: 91 SASIIIQLMTAAVPTLEAL-KKEGESGRKKLNQYTRYLTVLIAVFQAYGIAVGLEQMQGS 149
Query: 207 --PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFG 264
P V + + ++ VT L G+ F +IGE+I+ +GNG SL+IF I++ +P++
Sbjct: 150 FGPAVYEAGLFFRISCVTTLVGGTLFLMWIGEQITARGIGNGISLIIFAGIVANVPSALV 209
Query: 265 RTVAEAFQDGNYIGLATI-IISFILLVLGI----VYVQEAERKIPINYASRYTSRSGGLQ 319
T+ + G L+ + I++F+L+ L + V+V+ A+R+IPI Y R
Sbjct: 210 ATL----ELGRTGALSPVFIVAFMLIALAVIGFVVFVERAQRRIPIQYPKRQVGNRMFGG 265
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA---LKKAAVALNPGGSFYLPTN 376
+ +LP K+N++GV+P IF++S L LP T A F+G + L AL G Y+
Sbjct: 266 ENTHLPLKLNTAGVIPPIFASSLLLLPATFAGFSGGQSEGFLSTVTTALAHGQPLYMALY 325
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+ LI FF ++YT + +P + ++ LK+ G +P +RPG++T+ +L VL+R++ +G+++L
Sbjct: 326 VALIIFFAFFYTAVVFNPTETADNLKKHGGFVPGIRPGQATSDYLDRVLTRLTAVGAIYL 385
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
I+ P ++ + + F GTS+LI+V DT +VQ+ + + +Y+ +
Sbjct: 386 CIVCLLPELLISQYGVPFY--FGGTSLLIIVSVTMDTVAQVQSHLFAHQYEGL 436
>gi|430003440|emb|CCF19227.1| Preprotein translocase secY subunit [Rhizobium sp.]
Length = 446
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 242/433 (55%), Gaps = 14/433 (3%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNS 124
AA S+++F F K L + L L + RLG +IPL G+N EA+
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQAGG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGE GRK + Q
Sbjct: 64 ILGLFNMFAGGAVERMAIFALGIMPYISASIIVQLMTSVVPTLEAL-KKEGEQGRKVINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L V D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGTLQAYGIAVGLESGQGIVADPGWFFRISTVVTLLGGTMFLMWLGEQITAR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAE 300
+GNG SL+IF I++ LP + T+ L T+I+ I +++ IV+V+ A+
Sbjct: 183 GIGNGISLIIFAGIVAALPTALAGTLELGRTGALSTALILTVIVVAIAVIMLIVFVERAQ 242
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R++ I Y R +++LP K+N+SGV+P IF++S L LP T A F G + +
Sbjct: 243 RRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATAAGFAGNSEMPG 302
Query: 361 AAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKS 416
A AL G ++ LLIAFF ++YT + +P D ++ LK+ G IP +RPG+
Sbjct: 303 WATTIISALGHGQPAFMVLYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGER 362
Query: 417 TAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARK 476
TA ++ VL+RI+V+G+ +L + P ++ T + G GTS+LI+V DT +
Sbjct: 363 TAEYIDYVLTRITVVGAAYLVFVCVLPELLIARTGVPLALG--GTSLLIVVSVTLDTVAQ 420
Query: 477 VQAEIISQKYKNI 489
+Q +I+Q+Y+ +
Sbjct: 421 IQGHLIAQQYEGL 433
>gi|337754269|ref|YP_004646780.1| preprotein translocase subunit SecY [Francisella sp. TX077308]
gi|336445874|gb|AEI35180.1| Preprotein translocase secY subunit [Francisella sp. TX077308]
Length = 441
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 251/420 (59%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I+A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYISASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTSNMGLFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + + A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLGWFADVAEMLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ V++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|282849884|ref|ZP_06259267.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294792814|ref|ZP_06757961.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|294794568|ref|ZP_06759704.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|417000184|ref|ZP_11940505.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|282580321|gb|EFB85721.1| preprotein translocase, SecY subunit [Veillonella parvula ATCC
17745]
gi|294454898|gb|EFG23271.1| preprotein translocase, SecY subunit [Veillonella sp. 3_1_44]
gi|294456713|gb|EFG25076.1| preprotein translocase, SecY subunit [Veillonella sp. 6_1_27]
gi|333976265|gb|EGL77135.1| preprotein translocase, SecY subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 420
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 11/408 (2%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
L K L L A+ R GI+IP+ GV+ +L LD F+GG + + I ++
Sbjct: 14 LRNKILYTLMMFAVFRAGIHIPVPGVDASVIESLFTSGNLFGLLDLFAGGALSKFSIFAM 73
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL 205
I P+INA I+ QLL + P+ + K +GE GRKK+ + TRY +V VQA G L
Sbjct: 74 SITPYINASIIMQLLQSVVPQFEAWSK-DGEDGRKKIAKVTRYGTVVLGFVQAAGMAFAL 132
Query: 206 RP----YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
R NDF + +V+ +LT G+ +IGE+I+ +GNG SL+IF I++ LP
Sbjct: 133 RANNALVNNDFLSVFVVA--IILTAGTCLLMWIGEQITAYGIGNGISLIIFAGIVARLPD 190
Query: 262 SFGRTVAEAFQDGNYIGLATIIISFILLVL--GIVYVQEAERKIPINYASRYTSRSGGLQ 319
T+ + Q+G + + I L + +V V + +R+IPI YA R R
Sbjct: 191 GL-ETIYQYIQNGTINMFQAFLFAVIALAMIAVVVAVTQGQRRIPIQYAKRVVGRKMYGG 249
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
S +LP KVN +GV+PIIF++S L P T+A+F + KAA G +L
Sbjct: 250 HSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEFVHKAADLFTWGTPLQTALYAIL 309
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+YT + ++ D+++ +K+ G IP +R GK TA ++ V+++I++ G+VFLA++
Sbjct: 310 IFIFTYFYTAISINITDMADNMKKYGGFIPGIRAGKPTADYVDNVMTKITLAGAVFLAVV 369
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + T + F GT++LI+VG A DT +++++ ++++ YK
Sbjct: 370 AIIPNFLGSITGVQGVY-FGGTALLIVVGVALDTMQQIESLMVTRHYK 416
>gi|452954060|gb|EME59465.1| preprotein translocase subunit SecY [Rhodococcus ruber BKS 20-38]
Length = 437
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 246/423 (58%), Gaps = 30/423 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV---NREAFVGNL---DQNSLLSTLDSFSGGGIGRLGI 142
K L LG +AL RLG +P GV N A + L D + S ++ FSGG + +L +
Sbjct: 17 KILVALGLVALYRLGATLPSPGVDYGNVRACIDQLSGGDSAGIYSLINLFSGGALLQLSV 76
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
++GI+PFI A I+ QLL + P+ ++L+K EG+AG+ K+ QYTRY +V A++Q+ G V
Sbjct: 77 FAIGIMPFITASIIVQLLTVVIPRFEELRK-EGQAGQAKMTQYTRYLAVALAVLQSTGIV 135
Query: 203 -LYLR---------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
L R P + D S ++ V ++T G+A + GE I++ +GNG S+LIF
Sbjct: 136 ALAARGQLLQGCSEPILADDSIFGMVVIVLVMTAGAALVMWFGELITERGVGNGMSILIF 195
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYT 312
I S LP+ GRT+ E+ G + +++ ++++ G+V+V++ +R+IP+ YA R
Sbjct: 196 AGIASRLPSE-GRTILES--RGGLV-FTIVLVVALVVITGVVFVEQGQRRIPVQYAKRMV 251
Query: 313 SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAA--------VA 364
R S YLP KVN +G++P+IF++S L LP +A+ TG + +
Sbjct: 252 GRRMYGGSSTYLPLKVNQAGIIPVIFASSLLYLPNLIAQLTGATSATDPSWWQRIINEYL 311
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+NP Y+ LI FF ++Y + +P++ ++++K+ G IP +RPG+ TA +L V
Sbjct: 312 VNPNNPVYIAIYFGLIVFFVFFYVAITFNPEERADEMKKYGGFIPGIRPGRPTAEYLSYV 371
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L+RI+V GS++L ++A P + TA F G +VLILV A DT ++++++++ +
Sbjct: 372 LNRITVPGSLYLGLIATLPNFFLSGSQ-TATSIFGGAAVLILVSVALDTVKQIESQLMQR 430
Query: 485 KYK 487
Y+
Sbjct: 431 NYE 433
>gi|315127936|ref|YP_004069939.1| preprotein translocase subunit SecY [Pseudoalteromonas sp. SM9913]
gi|359439527|ref|ZP_09229479.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|359446515|ref|ZP_09236181.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
gi|392557094|ref|ZP_10304231.1| preprotein translocase subunit SecY [Pseudoalteromonas undina NCIMB
2128]
gi|315016450|gb|ADT69788.1| preprotein translocase, membrane component, transport across inner
membrane (general secretory pathway) [Pseudoalteromonas
sp. SM9913]
gi|358025770|dbj|GAA65728.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20311]
gi|358039615|dbj|GAA72430.1| preprotein translocase subunit SecY [Pseudoalteromonas sp.
BSi20439]
Length = 442
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 237/419 (56%), Gaps = 20/419 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + L +LG + + RLG ++P+ G++ +Q +++ + FSGG + R +
Sbjct: 18 LKRRLLFVLGAIIIYRLGSFVPIPGIDAAVLADFFEQQKGTIVEMFNMFSGGALERASVL 77
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A I+ QLL + P +L K+EGE GRKK+ QYTRY ++ A +Q+IG
Sbjct: 78 ALGIMPYISASIITQLLTHMYPPFIEL-KKEGEQGRKKISQYTRYGTLVLATIQSIGIAT 136
Query: 204 YLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L +N + + T+V L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 137 SLPGMMNGLVVNPGMGFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISVLIFVGIVANL 196
Query: 260 PASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
P++ G T AE + G+ ++ L +I F + L +V+ + +R+I +NYA R R
Sbjct: 197 PSAIGST-AEMARQGDLNVFVLLMVAVIVFAVTYL-VVFFERGQRRIVVNYAKRQQGRQV 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA------ALKKAAVALNPGGS 370
+S +LP KVN +GV+P IF++S + PGT+A + G L+ A L PG
Sbjct: 255 FAAQSTHLPLKVNMAGVIPPIFASSIILFPGTIASWFGQGEGPVADVLQAIATTLTPGQP 314
Query: 371 FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISV 430
Y I FF ++YT L +P + ++ LK+ GA IP +RPG+ T+ ++ V++R+++
Sbjct: 315 LYAMVLAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSKYIDKVMTRLTL 374
Query: 431 LGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + T F F GTS+LI+V D +VQ ++S +Y ++
Sbjct: 375 AGALYITFICLVPEFMTMAWQ-TPFY-FGGTSILIIVVVIMDFMAQVQTHLMSHQYDSV 431
>gi|256380578|ref|YP_003104238.1| preprotein translocase subunit SecY [Actinosynnema mirum DSM 43827]
gi|255924881|gb|ACU40392.1| preprotein translocase, SecY subunit [Actinosynnema mirum DSM
43827]
Length = 436
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 240/422 (56%), Gaps = 29/422 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGV---NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSL 145
K L LG + + RLG +P GV N + V +DQ + S ++ FSGG + L I +L
Sbjct: 17 KILFTLGIIVVYRLGATLPAPGVSFVNVKKCVEQVDQQGIYSLINLFSGGALLNLSIFAL 76
Query: 146 GIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV-LY 204
GI+P+I A I+ QLL + P+ + L K+EG++G+ K+ QYTRY ++ A++Q+ G + L
Sbjct: 77 GIMPYITASIIVQLLTVVIPRFEQL-KKEGQSGQGKLTQYTRYLTIALAVLQSTGIIALA 135
Query: 205 LR---------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
+R P + D S ++ V +T G++ ++GE I++ +GNG SLLIFT I
Sbjct: 136 VRGQLFANCDVPVIPDDSIFSLIVMVVTMTAGTSVIMWLGEIITEKGIGNGMSLLIFTGI 195
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
+ +P + + A + ++ +L++ ++YV++A+R+IP+ YA R R
Sbjct: 196 AARVPVE-----GQVIWSRGGLTFALVCVAALLIIASVIYVEQAQRRIPVQYAKRMIGRR 250
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT--------GIAALKKAAVALNP 367
S YLP KVN +GV+P+IF++S L LP ++R T G A ++
Sbjct: 251 MYGGTSTYLPLKVNQAGVIPVIFASSLLYLPDLISRLTAANDGSAPGWWQTFVATHLVSQ 310
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
++ +LI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L+ VL R
Sbjct: 311 SSPVHIALYFMLIVFFTYFYVGITFNPDERADEMKKFGGFIPGIRPGRPTAEYLRFVLGR 370
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGF--AGTSVLILVGCATDTARKVQAEIISQK 485
I++ GS++L I+A P + T + F GT+VLI+VG DT ++++++++ +
Sbjct: 371 ITLPGSLYLGIVAILPNLFLDLTGEGQNQNFPLGGTAVLIMVGVGLDTVKQIESQLMQRN 430
Query: 486 YK 487
Y+
Sbjct: 431 YE 432
>gi|335420843|ref|ZP_08551878.1| preprotein translocase subunit SecY [Salinisphaera shabanensis
E1L3A]
gi|334894145|gb|EGM32352.1| preprotein translocase subunit SecY [Salinisphaera shabanensis
E1L3A]
Length = 452
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 248/416 (59%), Gaps = 24/416 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLG 146
+ L L+G L + R+G +IP+ G++ +Q ++L F+GG + RL I +LG
Sbjct: 26 RLLFLVGALIVFRIGTFIPVPGIDPAQLARLFEQQAGTILDVGVMFTGGALKRLSIFALG 85
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYL- 205
++P+I+A I+ QL+ P L+DL K+EGEAGR+K+ QYTRY +V A Q+IG + L
Sbjct: 86 VMPYISASIIMQLMTATVPALKDL-KKEGEAGRRKITQYTRYGTVALASFQSIGTGIALW 144
Query: 206 -----RPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
+ ++F+ ++ T+ LT G+ F ++GE++++ +GNG S+LIF +I++ LP
Sbjct: 145 NQGIAQSGTSEFA--FIFTTAVCLTTGAMFLMWLGEQVTERGIGNGISMLIFAAIVAGLP 202
Query: 261 ASFGRTVAEAFQDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG 317
++ G T+ + + G + +A + + +L +V+V+ A+R+IP+++A R R
Sbjct: 203 SAIGGTL-DLVRTGELSVFFVIALFVGAMAVLAF-VVFVERAQRRIPVHHAQRQRGRRMY 260
Query: 318 LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGGSFYL 373
++ +LP K+N +GV+P IF++S + P T+ RF G +A A+A PG Y+
Sbjct: 261 AAQTQHLPLKLNMAGVIPPIFASSIILFPATVVRFLGEGGSVANWVSNAIA--PGQPLYV 318
Query: 374 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGS 433
L+I FF ++YT L D + ++ LK+ GA IP VRPG TA ++ TVL+R++V G+
Sbjct: 319 LFYSLMIIFFCFFYTALVFDSRETADNLKKSGAFIPGVRPGIQTANYIDTVLTRLTVAGA 378
Query: 434 VFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
V++ + P ++ ++ + F GTS+LI+V D ++QA ++S +Y+ +
Sbjct: 379 VYVTAVCLLPELLILQYNVPFY--FGGTSLLIIVVVVMDFMAQLQAHLMSHQYEGL 432
>gi|387885973|ref|YP_006316272.1| preprotein translocase subunit SecY [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870789|gb|AFJ42796.1| preprotein translocase subunit SecY [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 441
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 252/420 (60%), Gaps = 15/420 (3%)
Query: 84 GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-DQNS----LLSTLDSFSGGGIG 138
G L + + ++ + + RLG+YIP+ ++ V + +Q+S L+S + FSGG +
Sbjct: 12 GELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALT 71
Query: 139 RLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQA 198
++ I +LG++P+I A I+FQ+L+ + PK +L K+EGE+G+KK+ QYTRY ++ AIVQ+
Sbjct: 72 QMSIFALGVMPYILASIIFQMLSAVYPKFIEL-KKEGESGQKKITQYTRYLTLALAIVQS 130
Query: 199 IGQVLYLRPYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTS 254
G V ++ +T+ + LT++ +T GS F ++GE+I++ +GNG SLLIF+
Sbjct: 131 FGIVAFVLHQDGLVTTNNMGLFYLTTIVSVTTGSMFLMWLGEQITERGVGNGISLLIFSG 190
Query: 255 IISYLPASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTS 313
I++ LP T+++A Q +Y+ + ++I +L++ +V+++ A+RKI +NYA R
Sbjct: 191 IVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKITVNYAKRQQG 250
Query: 314 RSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKAAVALNPGG 369
R ++++LP K+N +GV+P IF++S L +PG L + + + A L PG
Sbjct: 251 RKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLDWFADVAELLQPGS 310
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
Y I FF ++YT L +P + ++ LK+ GA I VRPG+ TA ++ TV++R++
Sbjct: 311 IVYTVVFAATIIFFCFFYTSLVFNPKETADNLKKSGAYISGVRPGEQTAKYIDTVMTRLT 370
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++GS+++ + P + + F GTS+LI+V D +V++ ++S +Y ++
Sbjct: 371 LVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRSHMMSTQYDSL 430
>gi|159184982|ref|NP_354903.2| Preprotein translocase SECY subunit [Agrobacterium fabrum str. C58]
gi|335036175|ref|ZP_08529502.1| preprotein translocase subunit [Agrobacterium sp. ATCC 31749]
gi|159140258|gb|AAK87688.2| Preprotein translocase SECY subunit [Agrobacterium fabrum str. C58]
gi|333792066|gb|EGL63436.1| preprotein translocase subunit [Agrobacterium sp. ATCC 31749]
Length = 446
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 246/437 (56%), Gaps = 22/437 (5%)
Query: 68 AAAMEDSSIDFGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL--DQNS 124
AA S+++F F K L + L L + RLG +IPL G+N EA+ N
Sbjct: 4 AAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANG 63
Query: 125 LLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQ 184
+L + F+GG + R+ I +LGI+P+I+A I+ QL+ + P L+ L K+EGEAGRK + Q
Sbjct: 64 ILGLFNMFAGGAVERMAIFALGIMPYISASIIVQLMTSVVPSLEAL-KKEGEAGRKIINQ 122
Query: 185 YTRYASVGFAIVQAIGQVLYLRP---YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
YTRY +V +QA G + L V D + +++V L G+ F ++GE+I+
Sbjct: 123 YTRYGTVLLGTLQAYGIAVGLESGNGLVVDPGMFFRVSTVITLLGGTMFLMWLGEQITSR 182
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLAT-IIISFILLVLG----IVYV 296
+GNG SL+IF I + LP + +A + G L+T +I+ +++ +G IV+V
Sbjct: 183 GIGNGISLIIFAGIAAGLP----KALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFV 238
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
+ A+R++ I Y R +++LP K+N++GV+P IF++S L LP T A F G
Sbjct: 239 ERAQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTAGVIPAIFASSLLLLPATAAGFAGNT 298
Query: 357 ALKKAAVA----LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVR 412
L A + L G ++ LLIAFF ++YT + +P D ++ LK+ G IP +R
Sbjct: 299 NLPTWATSIIASLQHGQPLFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIR 358
Query: 413 PGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATD 472
PG+ TA ++ VL+RI+V+G+++L + P + T + G GTS+LI+V D
Sbjct: 359 PGERTAEYIDYVLTRITVVGAIYLVFVCILPETLIARTGIPLALG--GTSLLIVVSVTLD 416
Query: 473 TARKVQAEIISQKYKNI 489
T ++Q +I+Q+Y+ +
Sbjct: 417 TVAQIQGHLIAQQYEGL 433
>gi|261380579|ref|ZP_05985152.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
gi|284796547|gb|EFC51894.1| preprotein translocase, SecY subunit [Neisseria subflava NJ9703]
Length = 437
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 245/422 (58%), Gaps = 17/422 (4%)
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSG 134
FGD K + + LLG L + R+G +IP+ GV+ A + N + L+ FSG
Sbjct: 12 KFGDLKK-----RLVFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGMLNMFSG 66
Query: 135 GGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFA 194
G + R I ++GI+P+I++ I+ QL ++I P L+ L K+EGEAGRK + +YTRY +V A
Sbjct: 67 GSLERFSIFAIGIMPYISSSIIVQLASEIVPSLKAL-KKEGEAGRKIITKYTRYGTVLLA 125
Query: 195 IVQAIG--QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIF 252
++Q+ G +Y + V S ++ +++V L G+ F ++GE+I++ +GNG SL+I
Sbjct: 126 VLQSFGVATFVYQQGVVVTSSLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGISLIIT 185
Query: 253 TSIISYLPASFGRTVAEAFQDGNYIGLA-TIIISFILLVLGIVYVQEAERKIPINYASRY 311
I+S +P+ R + Q + +A +I+I +LL+ +VY + A+RK+P++YA R
Sbjct: 186 AGIVSGIPSGIVRLLTLTEQGSMSMLMAVSIVIGILLLIYAVVYFESAQRKVPVHYAKRQ 245
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGI----AALKKAAVALNP 367
+S ++PFK+N +GV+P IF++S + P TL + G + L K A L
Sbjct: 246 FGSGIMPGQSIHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSVLHKVAAMLQH 305
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y+ I FF Y+YT L P +++E LK+ GA +P +RPG+ T+ +L+ V+ R
Sbjct: 306 GQPLYIGLFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLEKVVLR 365
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+++ G++++ + P + ++ + G GTS+LILV D ++ + ++S +Y+
Sbjct: 366 LTLFGALYITTICLIPEFLTTALNVPFYLG--GTSLLILVVVTMDFRTQINSYVMSSQYE 423
Query: 488 NI 489
++
Sbjct: 424 DL 425
>gi|295838424|ref|ZP_06825357.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
gi|197695778|gb|EDY42711.1| preprotein translocase, SecY subunit [Streptomyces sp. SPB74]
Length = 437
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 239/430 (55%), Gaps = 21/430 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + + RLG ++P+ GVN + ++Q + L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRLGTHVPIPGVNYKNVQTCIEQANTNSGLFGLVNLF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I + I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGILPYITSSIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
A++Q G V R V D S + V +T G+A ++GE ++D
Sbjct: 124 LAVLQGTGLVATARSGAIFQGCSVAGDIVPDQSIFTTIVMVLTMTAGTATVMWLGELVTD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P S G +I T+II +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFVSIAAGFPGSLWAIKKGGDLAGGWIEFGTVIIVGLIMVALVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +FT A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFTDSQASWA 303
Query: 361 AAVALNPGGSFYLPTNI---LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ N + P + LLI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWIRDNLADTSAWPHVVLYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A +L VL+RI+ GS++L ++A P + + F GTS+LI+VG +T +++
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVPTLALAGFGANSNFPFGGTSILIIVGVGLETVKQI 423
Query: 478 QAEIISQKYK 487
++++ + Y+
Sbjct: 424 ESQLQQRNYE 433
>gi|220928227|ref|YP_002505136.1| preprotein translocase subunit SecY [Clostridium cellulolyticum
H10]
gi|219998555|gb|ACL75156.1| preprotein translocase, SecY subunit [Clostridium cellulolyticum
H10]
Length = 430
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 231/403 (57%), Gaps = 24/403 (5%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQN-SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQL 159
RLG IP+ G+N + F + + L + +D GG I ++ I P+INA I+ QL
Sbjct: 32 RLGSKIPVPGLNPDWFADLISKGGQLFNFIDIIGGGAFKNATIFAMSISPYINASIIMQL 91
Query: 160 LAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-PYVNDFSTDWVL 218
L PKL+ L K EGE GRKK+ Q+ RYA+V A +QA + LR ++ + +
Sbjct: 92 LTIAIPKLEQLSK-EGEEGRKKIGQWIRYATVILAFLQATAITIGLRGALISGLNVITFI 150
Query: 219 TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY-- 276
T LT G+AF ++GE+I++ +GNG S+LIF I+S P + + + GN
Sbjct: 151 TVTLTLTAGTAFLMWLGEQITEYGIGNGISMLIFAGILSAGPNGV-SYIYKNYTLGNLGS 209
Query: 277 --IGLATII---ISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSS 331
IG+ +I+ + F+ ++ +V+V +AER+IP+ YA R R +S +LP KVN +
Sbjct: 210 GAIGILSIVGILLVFVAVITCVVWVNQAERRIPVQYAKRVVGRKVYGGQSTHLPIKVNWA 269
Query: 332 GVMPIIFSTSSLALPGTLARFT------GIAALKKAAVALNPGGSF-YLPTNILLIAFFN 384
GV+PIIF+ S + LP T+ F GIA K N + Y LLI F
Sbjct: 270 GVIPIIFAMSIMMLPSTIVGFARPNATGGIAGFIK-----NWANHWSYALLYALLIIGFT 324
Query: 385 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA 444
++YT++Q +P +++ +K+ G IP +RPGK T+ ++ VL+RI+ G++FLA++ P
Sbjct: 325 FFYTYVQFNPIELANNMKKNGGFIPGIRPGKPTSDYIARVLNRITWFGALFLALITIFPY 384
Query: 445 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+I T + FAGTSVLILVG A DT R+++++++ + YK
Sbjct: 385 IIGWITGVQGVW-FAGTSVLILVGVAIDTVRQIESQMLMRHYK 426
>gi|23097594|ref|NP_691060.1| preprotein translocase subunit SecY [Oceanobacillus iheyensis
HTE831]
gi|22775817|dbj|BAC12095.1| preprotein translocase subunit [Oceanobacillus iheyensis HTE831]
Length = 430
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 247/420 (58%), Gaps = 31/420 (7%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K + L L + R+G +IP+ ++ A + +++ ++ L++F GG + I ++GI+
Sbjct: 17 KIIFTLLMLIVFRIGTFIPVPFTDKAA-IDFMNEQNVFGFLNTFGGGALQNFSIFAMGIM 75
Query: 149 PFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-------- 199
P+I A I+ QLL + PK + K++GE GRKK+ Q TRY ++ A VQAI
Sbjct: 76 PYITASIIMQLLQMDVVPKFAEW-KKQGEMGRKKIAQVTRYGTIVLAFVQAIAMSVGFNA 134
Query: 200 --GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIIS 257
G +L P V F LT +LT G+AF ++GE+I+ +GNG S++IF I++
Sbjct: 135 MAGGMLIADPNVMKF-----LTIAIVLTGGTAFLMWMGEQITAHGVGNGISIIIFAGIVA 189
Query: 258 YLPASFGRTVAEAFQD-GNYIGLATIIISFILLV-----LGIVYVQEAERKIPINYASRY 311
+P G+ ++ F + GN + + +I++ I LV +G+++V +A RKIP+ YA +
Sbjct: 190 AVPNGVGQLYSQYFSNPGNDLFINIVIVALIALVAVAVTVGVIFVNQALRKIPVQYAKKL 249
Query: 312 TSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSF 371
+RS +S +LP KVN++GV+P+IF+ + + P T+A G + A + +
Sbjct: 250 VNRSPVGGQSTHLPIKVNAAGVIPVIFAIAFMMAPTTIA---GFFEGNQVADFITRTFDY 306
Query: 372 YLPTNIL----LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
P ++ +I F Y+YTF+Q++P+ +SE L++QG IP +RPG +T +L V++R
Sbjct: 307 TSPVGMIIYVAMIIAFTYFYTFVQVNPEQMSENLQKQGGYIPGIRPGHNTEEYLTRVINR 366
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
++ +G++FLA+++ P ++ +L + GTS+LI+VG A T ++++ +++ + YK
Sbjct: 367 LTFVGALFLAVVSVFPMILGSLANLPSAVQIGGTSLLIVVGVALQTMKQLEGQLVKRHYK 426
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,426,641,653
Number of Sequences: 23463169
Number of extensions: 306850831
Number of successful extensions: 818434
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3795
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 795405
Number of HSP's gapped (non-prelim): 4171
length of query: 499
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 352
effective length of database: 8,910,109,524
effective search space: 3136358552448
effective search space used: 3136358552448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)