BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010829
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/492 (86%), Positives = 459/492 (93%)
Query: 6 WNKISLSLQQNCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSAR 65
WN + ++ E SVFDPLGINPD S L+S WESF+SLLSP+FES+SG +R+K SS R
Sbjct: 58 WNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSFESSSGNRRDKPSSGR 117
Query: 66 GVAAAMEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSL 125
GVAAA+EDSSIDFGDFFKGPLPGKFLKLLG+LALSRLGIYIPLGGVNREAFVGNLDQNS+
Sbjct: 118 GVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSI 177
Query: 126 LSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQY 185
LSTLD+FSGGGIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQY
Sbjct: 178 LSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQY 237
Query: 186 TRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
TRYASVGFAIVQAIGQV YLRPYVNDFST+WV++SVTLLTLGS TTYIGERISDLKLGN
Sbjct: 238 TRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGN 297
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPI 305
GTSLLIFTSIISYLPASFGRT AEA Q+GNY GL TI++SF+LLVLGIVYVQEAERKIP+
Sbjct: 298 GTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPL 357
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVAL 365
NYASRYTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL
Sbjct: 358 NYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFAL 417
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVL
Sbjct: 418 TPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVL 477
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
RISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK
Sbjct: 478 GRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 537
Query: 486 YKNIEFYDIDSY 497
YKNIEFY++D Y
Sbjct: 538 YKNIEFYELDKY 549
>sp|Q6ZG25|SECY_ORYSJ Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa
subsp. japonica GN=SECY PE=2 SV=1
Length = 556
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/481 (85%), Positives = 444/481 (92%), Gaps = 3/481 (0%)
Query: 19 GSVFDPLGINPDVCSH--LNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSI 76
G FDPLG+ D S S +F +LSP F S+SG ++EKS RG AAA+EDSSI
Sbjct: 75 GPGFDPLGLYNDGPSRNDTQSPLSNFFGVLSPVFGSSSGGRKEKSY-GRGAAAAIEDSSI 133
Query: 77 DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
D GDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNR+AF GNLDQNSLL TLDSFSGGG
Sbjct: 134 DIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLLGTLDSFSGGG 193
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 196
IGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKKVLQYTRYASVGFAIV
Sbjct: 194 IGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIV 253
Query: 197 QAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
QAIGQVL+LRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSII
Sbjct: 254 QAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSII 313
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
SYLPASFGRTVA+AFQDGNY+GL TII+SF+ LVLGIVYVQEAERKIP+NYASRY+SRSG
Sbjct: 314 SYLPASFGRTVAQAFQDGNYVGLLTIILSFLFLVLGIVYVQEAERKIPLNYASRYSSRSG 373
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTN 376
GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+ LKKAA++LNPGG+ Y+PTN
Sbjct: 374 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNPGGALYIPTN 433
Query: 377 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAAF+KTVLS ISVLGS FL
Sbjct: 434 VLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKTVLSNISVLGSAFL 493
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDS 496
A+LAAGP+V+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 494 AVLAAGPSVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVNR 553
Query: 497 Y 497
+
Sbjct: 554 F 554
>sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays
GN=SECY PE=2 SV=1
Length = 553
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/483 (84%), Positives = 449/483 (92%), Gaps = 4/483 (0%)
Query: 19 GSVFDPLGINPDVCSHLN-STWESFLSLLSPTFESTSGTK--REKSSSARGVAAAMEDSS 75
G FDPLG+ + + L+ S +F +++P F S+SG REK+S RG AAA+EDSS
Sbjct: 71 GPGFDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKAS-GRGAAAAIEDSS 129
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
ID GDFFKGPLPGKFLKLLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGG
Sbjct: 130 IDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGG 189
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQ++EGEAGRKKVLQYTRYASVGFAI
Sbjct: 190 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAI 249
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVLYLRPYVNDFST+WVLTSVTLLTLGS FTT+IGERISDLKLGNGTSLLIFTSI
Sbjct: 250 VQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYVQEAERKIP+NYASRY+SR+
Sbjct: 310 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRT 369
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
G LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF+G+ LKKAA+ALNPGG+ YLPT
Sbjct: 370 GELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPT 429
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTAA++KTVL+RISVLGS F
Sbjct: 430 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLNRISVLGSAF 489
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LA+LAAGP+++EQT+HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 490 LAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 549
Query: 496 SYG 498
+G
Sbjct: 550 RFG 552
>sp|Q9XQU4|SECY_PEA Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum
GN=SECY PE=2 SV=1
Length = 527
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/482 (82%), Positives = 443/482 (91%), Gaps = 11/482 (2%)
Query: 16 NCEGSVFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSS 75
+C+ + FDPLGINPD+ S +STW + L++ F+++S + RGVAAA+EDSS
Sbjct: 57 SCDLANFDPLGINPDLSS--SSTWRNLLTI----FQTSS-----QKDKPRGVAAAIEDSS 105
Query: 76 IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 135
IDFGDFF GPLPGKFLKLLG+LALSRLG+YIPLGGVNR+AF+GNLDQNSLL+TLDSFSGG
Sbjct: 106 IDFGDFFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGG 165
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
GIGRLGICSLGIVPFINAQIVFQLLAQ+ PKLQDLQK+EGEAGRKK+LQYTRYASVGFAI
Sbjct: 166 GIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASVGFAI 225
Query: 196 VQAIGQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
VQAIGQVL+LRPY NDF+T+W LTSV LLTLGS FTTYIGE+I++LKLGNGTSLLIFT+I
Sbjct: 226 VQAIGQVLFLRPYANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTSLLIFTNI 285
Query: 256 ISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS 315
ISYLPASFGRT ++AF D NY+GL TII+SF LLVLGIVYVQEAERKIPINYASR+TS+S
Sbjct: 286 ISYLPASFGRTFSQAFSDANYVGLVTIIVSFFLLVLGIVYVQEAERKIPINYASRFTSKS 345
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
GG+++SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+++LK AAVALNPGGSFYLP
Sbjct: 346 GGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTAAVALNPGGSFYLPF 405
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA F+KTVLSRISVLGS F
Sbjct: 406 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSTF 465
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
LAILAAGPAV+EQT HLTAFRGFAGTS+LILVGCATDTARKV+AEIISQKYKNIE YD D
Sbjct: 466 LAILAAGPAVVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFD 525
Query: 496 SY 497
Y
Sbjct: 526 KY 527
>sp|P93690|SECY_SPIOL Preprotein translocase subunit SECY, chloroplastic OS=Spinacia
oleracea GN=SECY PE=2 SV=1
Length = 545
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/475 (84%), Positives = 444/475 (93%)
Query: 21 VFDPLGINPDVCSHLNSTWESFLSLLSPTFESTSGTKREKSSSARGVAAAMEDSSIDFGD 80
VFDPLGI D + S W+ L +S TFES+SGT++++SSSARGVAAA+EDSSIDFGD
Sbjct: 70 VFDPLGIEQDNSWGVASAWDGVLKFVSQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGD 129
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
FFKGPLPGKFL LLG LALSRLGIY+PLGGVNREAFVGNLDQNS +STLDSFSGGGIGRL
Sbjct: 130 FFKGPLPGKFLTLLGLLALSRLGIYVPLGGVNREAFVGNLDQNSFISTLDSFSGGGIGRL 189
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
GICSLGIVPFINAQIVFQLL+Q+ PKLQDLQK+EGEAGRKK+ QYT+YASVGFA+VQAIG
Sbjct: 190 GICSLGIVPFINAQIVFQLLSQVYPKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQAIG 249
Query: 201 QVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
QVL+LRPYVND+ST+WVL+SV LLTLGS FTTY+GERISDLKLGNGTSLLIFT+IISYLP
Sbjct: 250 QVLFLRPYVNDYSTEWVLSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLP 309
Query: 261 ASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
ASFGRTVAEA+Q+GNY GLA I++SF+ LV GIVYVQEAERKIP+NYASRY+ +SGGLQ+
Sbjct: 310 ASFGRTVAEAYQEGNYTGLAIIVVSFVSLVFGIVYVQEAERKIPMNYASRYSGKSGGLQK 369
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLI 380
SAYLPFKVNS+GVMPIIFSTSSL+LP TLARFTG+ LKKAAVAL PGGSFYLPTNILLI
Sbjct: 370 SAYLPFKVNSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGSFYLPTNILLI 429
Query: 381 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILA 440
AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA++KTVLSRISVLGS FLAILA
Sbjct: 430 AFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSGFLAILA 489
Query: 441 AGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 495
AGPAV+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAE+ISQKYKNIEFYD++
Sbjct: 490 AGPAVVEQATHLTAFRGFAGTSVLILVGCATDTARKVQAELISQKYKNIEFYDLE 544
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 266/400 (66%), Gaps = 11/400 (2%)
Query: 101 RLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL 160
R+GI+IP+ ++R+AF ++ NS++ L+ F+GGG+ +GI +LGI+P+INA I+ QLL
Sbjct: 39 RVGIFIPVPDIDRQAFSQAINDNSVIGFLNIFTGGGLSTVGIFALGILPYINASIIMQLL 98
Query: 161 AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG-QVLYLRPYVNDFSTDWVLT 219
P L+DLQK EGEAGR+K+ QY+RY + G+ I+Q +G V LRPY N++ ++
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKISQYSRYIAFGWCIIQGLGLTVGLLRPYANNYGPLFIFQ 158
Query: 220 SVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDG--NYI 277
+V +T GS F +I E I++ +GNG SLLIF +I++ LP + G+T+ A G +
Sbjct: 159 TVLAITAGSMFVMWISELITERGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSIT 218
Query: 278 GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPII 337
+ +++ F+++++GIV+VQE R+IPI A R + +R++YLP ++N GVMPII
Sbjct: 219 AVVLLMLVFLVMIVGIVFVQEGTRRIPIISARRQVGKKLYRERTSYLPLRLNQGGVMPII 278
Query: 338 FSTSSLALPGTLARFT----GIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTF 389
F+++ L LP +LA F G+ + V AL PG Y ++I FF+Y+Y
Sbjct: 279 FASAVLILPSSLAGFATGNEGLGGFGEIFVQISNALRPGTWVYTVVYSVMIFFFSYFYAS 338
Query: 390 LQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQT 449
L ++P+DVS+ LK+ G+SIP +RPGK T +L+ VL+R++ LG++FL+ +A P +EQ
Sbjct: 339 LIVNPEDVSKNLKKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQA 398
Query: 450 THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T +T F+G TS+LILVG A DTA+++Q +ISQ+Y+ +
Sbjct: 399 TGVTTFQGLGATSLLILVGVAIDTAKQIQTYVISQRYEGM 438
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 270/418 (64%), Gaps = 19/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI+IP+ G++R AF +L N+ ++ LD FSGGG+ LG
Sbjct: 24 LRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALG 83
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+ +LGI+P+INA I+ QLL P L+DLQK EGEAGR+K+ Q TRY S+G+A++Q+I
Sbjct: 84 VFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVI 143
Query: 202 VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
+++ Y + + + L GS F +I E I++ +GNG SLLIF +I++ LP
Sbjct: 144 AVWVTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPR 203
Query: 262 SFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S +T+ E Q G+ G+ ++I F+ ++GIV+VQE R+IP+ A R
Sbjct: 204 SLQQTL-ELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYS 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS-------F 371
+RS+YLP ++N GVMPIIF+++ L LP +LA FT + + A L+P G F
Sbjct: 263 ERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTSNEVVLRIANYLSPNGPTPWIYALF 322
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL +LI F+Y+Y+ L L+P D+++ LK+ G+SIP VRPG++T+ +++ VL+R+++L
Sbjct: 323 YL----VLIVAFSYFYSSLILNPVDLAQNLKKMGSSIPGVRPGRATSQYVQGVLNRLTIL 378
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+VFL ++A P +E T + F+GF TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 379 GAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 270/418 (64%), Gaps = 19/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSFSGGGIGRLG 141
L G+ L +G L L RLGI+IP+ G++R AF +L N+ ++ LD FSGGG+ LG
Sbjct: 24 LRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALG 83
Query: 142 ICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ 201
+ +LGI+P+INA I+ QLL P L+DLQK EGEAGR+K+ Q TRY S+G+A++Q+I
Sbjct: 84 VFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVI 143
Query: 202 VLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPA 261
+++ Y + + + L GS F +I E I++ +GNG SLLIF +I++ LP
Sbjct: 144 AVWVTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPR 203
Query: 262 SFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
S +T+ E Q G+ G+ ++I F+ ++GIV+VQE R+IP+ A R
Sbjct: 204 SLQQTL-ELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYS 262
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS-------F 371
+RS+YLP ++N GVMPIIF+++ L LP +LA FT + + A L+P G F
Sbjct: 263 ERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTSNEVVLRIANYLSPNGPTPWIYALF 322
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
YL +LI F+Y+Y+ L L+P D+++ LK+ G+SIP VRPG++T+ +++ VL+R+++L
Sbjct: 323 YL----VLIVAFSYFYSSLILNPVDLAQNLKKMGSSIPGVRPGRATSQYVQGVLNRLTIL 378
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G+VFL ++A P +E T + F+GF TS+LILVG A DTA++VQ +ISQ+Y+ +
Sbjct: 379 GAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 264/407 (64%), Gaps = 1/407 (0%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L L L+RLGI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGI 63
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+IN+ IV QLL +I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+
Sbjct: 64 FALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWATLQSGAIS 123
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++++PYV +++ +V SV LT GS ++ E I++ +GNG SLLIF +I+S LP +
Sbjct: 124 IWVKPYVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKN 183
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
F ++ +A + I F+L+++ + VQE R+I I ++R +S L ++
Sbjct: 184 FTQSFFDASYSNASLKFGLFIAIFLLMIIITICVQEGTRRIKI-ISARQLGKSSILDPNS 242
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAF 382
YLP K+N GVMPI+F+++S+ALP L + L + P GS YL LI F
Sbjct: 243 YLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILYLFCPNGSLYLLLYCALILF 302
Query: 383 FNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAG 442
F+Y+YT + ++P+D++ LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A
Sbjct: 303 FSYFYTSIVMNPEDIAINLKKMGASIPNIRPGQATIDYLQVILNRLTFLGASFLFTVALI 362
Query: 443 PAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
P +IE+ T + RG TS+LILVG A DTA+++Q +IS+KY ++
Sbjct: 363 PFIIEKVTQIQNLRGLGATSLLILVGVAIDTAKQIQTYVISKKYDSM 409
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 259/391 (66%), Gaps = 9/391 (2%)
Query: 103 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQ 162
GI+IP+ G++ +AF ++++N+L++ L+ FSGGG +GI +LGIVP+IN+ IV QLL +
Sbjct: 24 GIFIPVPGIDHDAFYASVEKNTLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLLTK 83
Query: 163 INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTDWVLTSVT 222
I P L+ LQK EGE GR+K+ Q TRY ++G+A +Q+ ++++PYV +++ +V SV
Sbjct: 84 IIPDLEKLQKEEGELGRQKITQITRYLALGWATLQSGAISIWVKPYVFNWNFTFVCESVL 143
Query: 223 LLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNY----IG 278
LT GS ++ E I++ +GNG SLLIF +I+S LP +F ++F D NY I
Sbjct: 144 ALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKNF----TQSFFDANYSNTSIK 199
Query: 279 LATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIF 338
I+ F+L+++ ++VQE R+I I ++R +S L ++YLP K+N GVMPI+F
Sbjct: 200 FGLFIVIFLLMIIITIFVQEGTRRIKI-ISARQLGKSSILDPNSYLPLKLNQGGVMPIVF 258
Query: 339 STSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVS 398
+++S+ALP L + T L + P GS YL +LI FF+Y+YT + ++P+D++
Sbjct: 259 ASASMALPAYLTQLTQNTFLLQVLYLFCPNGSLYLVLYSVLILFFSYFYTSIVMNPEDIA 318
Query: 399 EQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGF 458
LK+ GASIP +RPG++T +L+ +L+R++ LG+ FL +A P +IE+ + RG
Sbjct: 319 TNLKKMGASIPNIRPGQATIDYLQVILNRLTFLGATFLFTVALIPFIIEKVAQIQNLRGL 378
Query: 459 AGTSVLILVGCATDTARKVQAEIISQKYKNI 489
TS+LILVG A DTA+++Q +IS+KY ++
Sbjct: 379 GATSLLILVGVAIDTAKQIQTYVISKKYDSM 409
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 260/411 (63%), Gaps = 6/411 (1%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGI 142
K L + + L + +SRLG ++P+ GV+ +AF ++ N L++ L+ FSGGG +G+
Sbjct: 10 KQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIISNPLVNFLNVFSGGGFASIGV 69
Query: 143 CSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQV 202
+LGIVP+INA I+ QL P L+ LQK EGE GR+K++Q TRY ++ +A++Q+IG
Sbjct: 70 FALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVALVWALIQSIGVS 129
Query: 203 LYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
++RPYV ++ ++V LT+GS + E+I++ +GNG SLLIF +IIS LP
Sbjct: 130 FWVRPYVFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPSLLIFINIISGLPKL 189
Query: 263 FGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSA 322
+ + + + ++ F ++++GI+++QE ++IPI ++R + +++
Sbjct: 190 LQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGIKRIPI-ISARQLGKGQMDNKTS 248
Query: 323 YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS----FYLPTNIL 378
YLP K+N SGVMPIIF+++ L LP LA+ L + + L G S YL
Sbjct: 249 YLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSNEQL-RTVLHLFDGTSNNKLLYLLFYFT 307
Query: 379 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAI 438
LI FF+Y+YT L L+P+DVS+ LK+ +SI VRPGK+T +L+ L+R++ LG++FLA
Sbjct: 308 LILFFSYFYTSLILNPNDVSKNLKKMESSIYGVRPGKATTEYLQKTLNRLTFLGALFLAF 367
Query: 439 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+A P +IE T+L+ F+G GTS+LI+VG DT++++Q +IS+ Y+ I
Sbjct: 368 IAIVPNIIETLTNLSVFKGLGGTSLLIIVGVQVDTSKQIQTYLISKNYETI 418
>sp|P38397|SECY_PYRSA Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina
GN=secY PE=3 SV=1
Length = 412
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 246/401 (61%), Gaps = 16/401 (3%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA 153
+G L LSRLG +IP+ GV+ +AF ++ N +++ L+ FSGGG +GI +LGIVP+INA
Sbjct: 21 IGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSGGGFASIGIFALGIVPYINA 80
Query: 154 QIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFS 213
IV QL P L+ LQK EGEAGR+K+ Q TRY ++G+A +Q++G ++RPYV ++
Sbjct: 81 SIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWAAIQSLGVSFWVRPYVFNWD 140
Query: 214 TDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQD 273
+ +V+ LT GS + E+I++ +GNG SLLIF +II+ LP Q
Sbjct: 141 SQFVVQMTLALTTGSMLIMWFSEQITEKGIGNGPSLLIFINIIAGLPKLIQ-------QK 193
Query: 274 GNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGG--LQRSAYLPFKVNSS 331
N I ++L VY + +I I Y ++ G ++++YLP ++N
Sbjct: 194 SNAISSTNQTTELVVLASISVY----DSRIFIRDRRYYILQTVGRHCKQTSYLPLRLNQG 249
Query: 332 GVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYT 388
GVMPIIF+++ L LP L + + K L+P S YL LI FF+Y+Y
Sbjct: 250 GVMPIIFASAILVLPAYLGQVIQNQFVLKLVTLLSPNSSDKNLYLIFYFSLILFFSYFYA 309
Query: 389 FLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQ 448
L ++P+DVS+ LK+ +SIP VRPGK+T +L+ L+R++ LG++FLA +A P++IE
Sbjct: 310 SLIINPNDVSQNLKKMESSIPGVRPGKATTDYLQKTLNRLTFLGALFLAFIAVVPSIIEN 369
Query: 449 TTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
T ++ F+G TS+LILVG A DT+R++Q +IS+ Y+NI
Sbjct: 370 ITSISTFKGLGATSLLILVGVAIDTSRQIQTYLISRNYENI 410
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 244/413 (59%), Gaps = 17/413 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLG 146
KF+ L + RLG +IP+ G+N EA L + S+ + D FSGG +GRL + +LG
Sbjct: 17 KFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALG 76
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
++P+I+A I+ QLL P LQ L K EG+ GR K+ +YT+Y ++ A VQ++G ++R
Sbjct: 77 VMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIR 136
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
P V + ++L +V L G+ F +I +RI++ +GNG SL+IF I++
Sbjct: 137 GQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVAN 196
Query: 259 LPASFGRTVAEAFQDGNYIGLATIIISFILLV---LGIVYVQEAERKIPINYASRYTSRS 315
P + + E + G+ IG T+++ L++ +GIVYVQEAER+IPI Y R R
Sbjct: 197 FPNAVIQ-FYEKVKTGD-IGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQ 254
Query: 316 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPT 375
R YLP K+N +GV+PIIF+ + L +P TL F +K A PG FY
Sbjct: 255 LYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFL 314
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
+ I FF Y+YT + ++P +++E L + GA IP VRPG+ T +L+ +++R+ G++F
Sbjct: 315 YVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALF 374
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
L+++A P +I ++ + F GT+ LI+VG A DT R+++ +I +KYK+
Sbjct: 375 LSVIALIPILISVWFNIPFY--FGGTTALIVVGVALDTFRQIETYLIQKKYKS 425
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 90 FLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGI 147
FL ++ Y R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI
Sbjct: 26 FLAIIVY----RIGAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGI 81
Query: 148 VPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
+P+I+A I+ QL+ I+P+L+ L K+EGE+GR+K+ QYTRY +V A+VQAIG + L
Sbjct: 82 MPYISASIIMQLMTAISPQLEQL-KKEGESGRRKISQYTRYGTVVLALVQAIGMSVGLGS 140
Query: 208 YVNDFSTDW--VLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
FS D+ +VT G+ F ++GE+I++ +GNG S+LIF I++ LP + G+
Sbjct: 141 QGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQ 200
Query: 266 TVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYL 324
+ A Q D N L + + + ++ +V+++ +R+I ++YA R R ++++L
Sbjct: 201 SFESARQGDINIFALIGVGLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHL 260
Query: 325 PFKVNSSGVMPIIFSTSSLALPGTLARF----TGIAALKKAAVALNPGGSFYLPTNILL- 379
P KVN +GV+P IF++S L P +L + G+ L+ A A+ PG P NILL
Sbjct: 261 PLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQDVAQAIAPGQ----PLNILLF 316
Query: 380 ---IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFL 436
I FF ++YT L +P DV+E LK+ GA IP +RPG+ +A ++ VL+R+++ G++++
Sbjct: 317 TAGIVFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYM 376
Query: 437 AILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI-EFYDID 495
+ P + H+ + G GTS+LI+V D +VQ+ ++S +Y+++ + ++
Sbjct: 377 TAVCLLPQFLVVAAHVPFYLG--GTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLK 434
Query: 496 SYGS 499
YGS
Sbjct: 435 GYGS 438
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 245/423 (57%), Gaps = 15/423 (3%)
Query: 78 FGDFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 136
F +FFK + K L L + ++G YIP GVN AF N + L++F GG
Sbjct: 5 FVNFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGSQGVTDLLNTFGGGA 64
Query: 137 IGRLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ I ++GI+P+I A IV QLL I PK + K +G+ GRKK+ TRY ++ A
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAK-QGDVGRKKLNNVTRYFAIILAF 123
Query: 196 VQAIGQVLYLRPYVN-----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
+Q+IG Y+ D S L +LT G+AF ++GE+I+ +GNG S++
Sbjct: 124 IQSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISII 183
Query: 251 IFTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPI 305
IF I+S LP+S + +AF + ++ +A ++I +LL +G VYV +A RKIPI
Sbjct: 184 IFAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPI 243
Query: 306 NYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVA 364
YA + +++ G + YLP KVNS+GV+P+IF+ + LP TL F A ++ A
Sbjct: 244 QYAKKQSTQRLG-SNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQIANT 302
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
NP + + I+LI F Y+Y F+Q++P+ +S+ LK+QG+ +P +RPG+ T ++ V
Sbjct: 303 ANPSSNIGMVIYIILIIAFTYFYAFVQVNPEKMSDNLKKQGSYVPGIRPGEQTKKYITKV 362
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ +GS+FLA++A P + + +L GTS+LI++G A +T + ++A++ +
Sbjct: 363 LYRLTFVGSIFLAVIAILPILATKFMNLPQSIQVGGTSLLIVIGVAIETMKSLEAQVNQK 422
Query: 485 KYK 487
+YK
Sbjct: 423 EYK 425
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 83 KGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRL 140
KG L + L +LG L + R+G +IP+ G++ ++Q +++ + FSGG + R
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI- 199
I +LGI+P+I+A IV QLLA ++P L +L K+EG AG++K+ +YTRYA+V FA +QA+
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAEL-KKEGAAGQRKISKYTRYATVVFATIQAVA 134
Query: 200 ---GQVLYLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII 256
G L V + + TSV L G+ F ++GE+I++ +GNG S+L+F I+
Sbjct: 135 ISTGLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 257 SYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLG--IVYVQEAERKIPINYASRYTSR 314
+ LP++ +T+ +A Q G L ++I+ I+ + +V+V+ +R+I + YA R R
Sbjct: 195 AGLPSAILQTIEQARQ-GQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEYAKRQQGR 253
Query: 315 S--GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPG 368
GG S +LP KVN + VMP IF++S + P TL ++ G L ++ LNPG
Sbjct: 254 QILGG--HSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWLNNLSMLLNPG 311
Query: 369 GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRI 428
YL + I FF+++YT +Q +P D ++ LK+ GA IP +RPG+ T+ ++ V++R+
Sbjct: 312 QPLYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIRPGEQTSRYIDKVMTRL 371
Query: 429 SVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
+++G +++ + P ++ + + F GTS+LI+V D +VQ+ ++S +Y++
Sbjct: 372 TLIGGLYVTFVCLVPYIMTSAWDVKFY--FGGTSLLIVVVVIMDFIVQVQSHLMSSQYES 429
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 17/422 (4%)
Query: 80 DFFK-GPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 138
+FF+ + K L L + ++G YIP GVN AF L++F GG +
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALK 66
Query: 139 RLGICSLGIVPFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQ 197
R I ++GIVP+I A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q
Sbjct: 67 RFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAK-QGEVGRRKLNNVTRYLAISLAFIQ 125
Query: 198 AIGQVLYLRPY------VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLI 251
+IG Y +N ++L ++ +LT G+AF ++G++I+ +GNG S++I
Sbjct: 126 SIGMAFQFNNYLKGALIINQSIMSYLLIAL-VLTAGTAFLIWLGDQITQFGVGNGISIII 184
Query: 252 FTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPIN 306
F I+S LPAS FG+T +D + ++ + +++S ILL +G +YV EA RKIPI
Sbjct: 185 FAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQ 244
Query: 307 YASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVAL 365
YA + T++ G Q + YLP KVNS+GV+P+IF+ + LP TL F + A A
Sbjct: 245 YAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAA 303
Query: 366 NPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVL 425
NP + + I+LI F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL
Sbjct: 304 NPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVL 363
Query: 426 SRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQK 485
R++ +GS+FLA+++ P + + L GTS+LI++G A +T + ++A++ ++
Sbjct: 364 YRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIGVAIETMKSLEAQVSQKE 423
Query: 486 YK 487
YK
Sbjct: 424 YK 425
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 18/408 (4%)
Query: 94 LGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLST--LDSFSGGGIGRLGICSLGIVPFI 151
L L + ++G YIP GVN EAF N Q S +T L++F GG + R I ++GI+P+I
Sbjct: 22 LAMLVIFKIGTYIPAPGVNPEAF--NHPQGSQGATELLNTFGGGALKRFSIFAMGIMPYI 79
Query: 152 NAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVN 210
A IV QLL I PK + K +GE GR+K+ TRY ++ A +Q+IG Y+
Sbjct: 80 TASIVMQLLQMDIVPKFTEWAK-QGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLK 138
Query: 211 -----DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGR 265
+ S L +LT G+AF ++G++I+ +GNG SL+IF I+S LP+S +
Sbjct: 139 GQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSLEQ 198
Query: 266 TVAEAF--QDGN---YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
F QD ++ + +I++ ILL +G ++V EA+RKIPI YA + +++ G Q
Sbjct: 199 FAQSVFVGQDDTSLAWLKILGLIVALILLTVGAIFVLEAKRKIPIQYAKKQSAQRLGSQ- 257
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAAL-KKAAVALNPGGSFYLPTNILL 379
+ YLP KVNS+GV+P+IF+ + LP TL F A + A NP + + ++L
Sbjct: 258 ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEWAQNIADTANPSSNIGMIIYVVL 317
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
I F Y+Y F+Q++P+ +++ LK+QG+ +P +RPG+ T ++ VL R++ +GS+FLA +
Sbjct: 318 IIAFAYFYAFVQVNPEKMADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAAI 377
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P + + L GTS+LI++G A +T + ++A++ ++YK
Sbjct: 378 AILPIIATKFMGLPQSIQIGGTSLLIVIGVAIETMKTLEAQVTQKEYK 425
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 86 LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGIC 143
L + ++G L + R G ++P+ G++ +Q +++ + FSGG + R I
Sbjct: 19 LKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASIL 78
Query: 144 SLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVL 203
+LGI+P+I+A IV QLL ++P L +L K+EGEAGR+K+ QYTRY ++ A QAIG
Sbjct: 79 ALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
Query: 204 YLRPYVNDF----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYL 259
L VN+ T + L + L G+ F ++GE+I++ +GNG S+LIF I++ L
Sbjct: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
Query: 260 PASFGRTVAEAFQ-DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGL 318
P + G+T+ +A Q + + + L I + ++ +V+++ +R+I +NYA R R
Sbjct: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
Query: 319 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG-------IAALKKAAVALNPGGSF 371
+S +LP K+N +GV+P IF++S + PGTLA++ G L ++AL+PG
Sbjct: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
Query: 372 YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVL 431
Y+ I FF ++YT L +P + ++ LK+ GA +P +RPG+ TA ++ V++R+++
Sbjct: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
Query: 432 GSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
G++++ + P + ++ + F GTS+LI+V D +VQ ++S +Y+++
Sbjct: 378 GALYITFICLIPEFMMVAWNVRFY--FGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 243/440 (55%), Gaps = 39/440 (8%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVN--------REAFVGNLDQNSLLST 128
F F+ P L K L L + + R+G +IP+ GV+ REA GN L
Sbjct: 5 FARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREA-SGN---QGLFGL 60
Query: 129 LDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRY 188
++ FSGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRY 119
Query: 189 ASVGFAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGE 236
+V AI+Q G V R V D S +T V +T G+ ++GE
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 237 RISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYV 296
I+D +GNG S+L+F SI + P++ + G +I T+I +++V +V+V
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQGTLAGGWIEFGTVIAVGLIMVALVVFV 239
Query: 297 QEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIA 356
++A+R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P +A+F G
Sbjct: 240 EQAQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAGGN 299
Query: 357 ALKKAAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRP 413
+ K+ V N Y+ T LLI FF ++Y + +P++V++ +K+ G IP +R
Sbjct: 300 SGWKSWVEQNLTKGDHPIYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRA 359
Query: 414 GKSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVG 468
G+ TA +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG
Sbjct: 360 GRPTAEYLSYVLNRITWPGSLYLGLIALVP-----TMALVGFGASQNFPFGGTSILIIVG 414
Query: 469 CATDTARKVQAEIISQKYKN 488
+T +++++++ + Y+
Sbjct: 415 VGLETVKQIESQLQQRNYEG 434
>sp|P38375|SECY_BACHD Protein translocase subunit SecY OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=secY PE=3 SV=2
Length = 430
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 241/423 (56%), Gaps = 21/423 (4%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 140
F G L K + L L + R+G +IP+ G NRE + +DQ + L++F GG +G
Sbjct: 9 FRVGDLRRKVIFTLLMLIVFRIGSFIPVPGTNREV-LDFVDQANAFGFLNTFGGGALGNF 67
Query: 141 GICSLGIVPFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI 199
I ++GI+P+I A IV QLL + PK + K EGEAGR+K+ Q+TRY ++ +QA+
Sbjct: 68 SIFAMGIMPYITASIVMQLLQMDVVPKFAEWAK-EGEAGRRKLAQFTRYGTIVLGFIQAL 126
Query: 200 GQVL----YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
G + + + + S L +LT G+AF ++GE+I+ +GNG S++IF I
Sbjct: 127 GMSVGFNNFFPGLIPNPSVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGI 186
Query: 256 ISYLPASFGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYAS 309
+ +P + QD N + + + ++ + +++G+++VQ+A RKIP+ YA
Sbjct: 187 AAGIPNGLNLIYSTRIQDAGEQLFLNIVVILLLALAILAIIVGVIFVQQALRKIPVQYAK 246
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA----- 364
R R+ +S +LP KVN++GV+P+IF+ S P T+A G A V
Sbjct: 247 RLVGRNPVGGQSTHLPLKVNAAGVIPVIFALSLFIFPPTVAGLFGSDHPVAAWVIETFDY 306
Query: 365 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTV 424
+P G + LLI F Y+YTF+Q++P+ ++E LK+QG IP +RPGK+T ++ +
Sbjct: 307 THPIG---MAVYALLIIGFTYFYTFIQVNPERMAENLKKQGGYIPGIRPGKATQTYITRI 363
Query: 425 LSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ 484
L R++ +GS+FLA++A P + L GT +LI+VG A DT ++++A++I +
Sbjct: 364 LYRLTFVGSLFLAVVAILPVFFIKFADLPQAIQIGGTGLLIVVGVALDTMKQIEAQLIKR 423
Query: 485 KYK 487
YK
Sbjct: 424 SYK 426
>sp|P28539|SECY_CHLTR Protein translocase subunit SecY OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=secY PE=3 SV=3
Length = 457
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 238/424 (56%), Gaps = 31/424 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRLGICSLGIVPFI 151
LAL R+G++IP+ G+N + V +Q +L D FSGG ++ + +LG+VP+I
Sbjct: 24 LALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFSGGAFAQMTVIALGVVPYI 83
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI------------ 199
+A I+ QLL P LQ + + G++K+ + TR ++ A VQ++
Sbjct: 84 SASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVLACVQSLLFAKFALRMNLV 143
Query: 200 --GQVLYLRPYVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
G VL + F WV LT+V ++ G+ ++GE+ISD +GNG SL+I I
Sbjct: 144 VPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQISDKGIGNGISLIITLGI 203
Query: 256 ISYLPASFGRTVAE---AFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYAS 309
++ P+ G + QD + G+ +++I F+ +++ V + E RKIP+ +A
Sbjct: 204 LASFPSVLGSIFNKLNLGSQDPSEFGIVSLLILCAVFVFVLMATVLIIEGMRKIPVQHAR 263
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--LKKAAVALNP 367
R R + +YLP KVN +GV+P+IF++S L P T+ +F + LK+ A L+P
Sbjct: 264 RIIGRREVVGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQFLSSESSWLKRIATMLSP 323
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y +LLI FF Y++T Q P+ ++ ++K+ GA IP +R GK T +L+ ++R
Sbjct: 324 GSVAYSIFYVLLIIFFTYFWTATQFRPEQIASEMKKNGAFIPGIRQGKPTQTYLEYTMNR 383
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGF--AGTSVLILVGCATDTARKVQAEIISQK 485
+++LG+VFLA++A P+++ + + A + GT++LI+VG DT +++ A ++ ++
Sbjct: 384 VTLLGAVFLAVVAILPSILGRILRVDANVSYFLGGTAMLIVVGVILDTMKQIDAFLLVRR 443
Query: 486 YKNI 489
Y +
Sbjct: 444 YDGV 447
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 232/408 (56%), Gaps = 30/408 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQN--------SLLSTLDSFSGGGIGRLGICSLGIV 148
L + R+GIYIP+ G+N EA+ G + + +LS D F+GG + R + ++ +
Sbjct: 25 LIVFRMGIYIPVPGLNLEAW-GEIFRRIAETAGVAGILSFYDVFTGGALSRFSVFTMSVT 83
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR-- 206
P+I A I+ QLLA + P L+++ REGE GRKK +YTR ++ QA L
Sbjct: 84 PYITASIILQLLASVMPSLKEML-REGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARS 142
Query: 207 ------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLP 260
P VN VL+++++L G+ F ++GERI++ +GNG S+LIF I++ P
Sbjct: 143 NPDMVAPGVNVLQFT-VLSTMSMLA-GTMFLLWLGERITEKGIGNGISILIFAGIVARYP 200
Query: 261 ASFGRTVAEAFQDG-NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQ 319
+ + +A+ G N + +I ++ + GI+ VQ+AER+I I YA R T R
Sbjct: 201 SY----IRQAYLGGLNLLEWIFLIAVALITIFGIILVQQAERRITIQYARRVTGRRVYGG 256
Query: 320 RSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILL 379
S YLP KVN GV+PIIF+++ +++P +A T LK GG YL LL
Sbjct: 257 ASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNNETLKNL---FRAGGFLYLLIYGLL 313
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ FF Y+Y+ + DP ++SE +++ G IP +RPG+ST +L VL+R++ +G+VFL ++
Sbjct: 314 VFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVI 373
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
A P +++ + + G GTS LI VG A D ++++ ++ + Y+
Sbjct: 374 ALLPYLVQGAIKVNVWIG--GTSALIAVGVALDIIQQMETHMVMRHYE 419
>sp|Q05207|SECY_BACLD Protein translocase subunit SecY OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=secY PE=3 SV=2
Length = 431
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 238/418 (56%), Gaps = 27/418 (6%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K + L L + RLG +IP+ VN E DQ S+ L++F GG + I ++GI+
Sbjct: 17 KIIFTLLMLIVFRLGSFIPVPHVNTEVLKAQ-DQMSVFGILNTFGGGALFNFSILAMGIM 75
Query: 149 PFINAQIVFQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR- 206
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ +QA+G
Sbjct: 76 PYITASIIIQLLQMDVVPKFTEWSK-QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNN 134
Query: 207 ----PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
+ D L +LT G+AF ++GE+I+ +GNG S++IF I++ +P +
Sbjct: 135 MAGGALITDPGVGTYLLIAIVLTAGTAFLMWLGEQITSHGVGNGISIIIFAGIVAGIPQT 194
Query: 263 FGRTVAEAFQDG------NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRS- 315
+ A+ F D I + I+++ + +V+G++++Q+A RKI I YA + + RS
Sbjct: 195 INQIYAQQFVDAGDQLFLQIIKVVVILVAILAIVVGVIFIQQAVRKISIQYA-KGSGRSP 253
Query: 316 --GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG----IAALKKAAVALNPGG 369
GG +S +LP KVN +GV+P+IF+ + + P T+A F G ++K +P G
Sbjct: 254 VPGG--QSTHLPLKVNPAGVIPVIFAVAFITTPRTVATFFGSNDVTNWIQKTFDYTHPVG 311
Query: 370 SFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS 429
+ LI F Y+Y F+Q++P+ +++ LK+QG IP VRPGK T + ++L R++
Sbjct: 312 ---MGVYAALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGVRPGKMTQDRITSILYRLT 368
Query: 430 VLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
+GS+FLA++A P + L + GTS+LI++G A +T ++++++++ + Y+
Sbjct: 369 FVGSIFLAVIAILPVLFVNIAGLPSSAQIGGTSLLIVIGVALETMKQLESQLVKRNYR 426
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 233/436 (53%), Gaps = 31/436 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ---NSLLSTLDSFS 133
F FK P L K L LG + + RLG +IP GV+ +DQ LL + FS
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFS 64
Query: 134 GGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGF 193
GG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 GGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVAL 123
Query: 194 AIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDL 241
AI+Q G V R V D S + V +T G+ ++GE I+D
Sbjct: 124 AILQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDR 183
Query: 242 KLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAER 301
+GNG S+ +F SI + P + +I T+I+ ++V +V+V++A+R
Sbjct: 184 GIGNGMSIPMFISIAATFPGALWAIKESGKLADGWIEFGTVILIGFVMVALVVFVEQAQR 243
Query: 302 KIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA 361
+IP+ R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RIPVQLPKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSQAGWAT 303
Query: 362 AVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA 418
+ N +Y+ T +LI FF ++Y + +PD+V++ +K+ G IP +R G+ TA
Sbjct: 304 WIQDNFVTGDHPYYIATYFVLIVFFAFFYVAISFNPDEVADNMKKYGGFIPGIRAGRPTA 363
Query: 419 AFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG------FAGTSVLILVGCATD 472
+L VL+RI+ GS++L ++A P T L F G F GTS+LI+VG +
Sbjct: 364 EYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYKN 488
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYEG 434
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 236/415 (56%), Gaps = 19/415 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
K L LG+L L R+ YIP+ GV+ A D NS L + FSG + RL I SLG
Sbjct: 8 KILITLGFLFLYRVLAYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLG 67
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I + I+ +LL+ P L ++K G +K +Q RY ++ ++QA+ + LR
Sbjct: 68 IMPYITSSIIMELLSATFPNLAKMKKERD--GMQKYMQIVRYLTILITLIQAVSVSVGLR 125
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ D ++++ ++LT G+ +IGE+I+ +GNG SL+IF I+S
Sbjct: 126 SISGGANGAIMIDMQVFMIVSAFSMLT-GTMLLMWIGEQITQRGVGNGISLIIFAGIVSG 184
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P++ T G N + L I++ + + I+YV+ AER+IPI+YA + ++
Sbjct: 185 IPSAISGTF-NLVNTGVINILMLIGIVLIVLATIFAIIYVELAERRIPISYARKVVMQNQ 243
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGT-LARFTGIAALKKAAVALNPGGSFYLPT 375
+ Y+P K+N SGV+P IF+++ L P T L + T L+ A L+P G Y
Sbjct: 244 NKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQAVADFLSPQGYAYNIL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LLI FF Y+Y+ + + D+++ L+R G IP +RPG+ T++FL +V S++++ GS++
Sbjct: 304 MFLLIIFFAYFYSSIVFNSKDIADNLRRNGGYIPGLRPGEGTSSFLNSVASKLTLWGSLY 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
LA+++ P ++ + + + F GT+VLI+V A DT +K++A+I KYK +
Sbjct: 364 LALISTVPWILVKAMGVPFY--FGGTAVLIVVQVAIDTMKKIEAQIYMSKYKTLS 416
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 235/415 (56%), Gaps = 19/415 (4%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS--LLSTLDSFSGGGIGRLGICSLG 146
K L LG+L L R+ YIP+ GV+ A D NS L + FSG + RL I SLG
Sbjct: 8 KILITLGFLFLYRVLAYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLG 67
Query: 147 IVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLR 206
I+P+I + I+ +LL+ P L ++K G +K +Q RY ++ ++QA+ + LR
Sbjct: 68 IMPYITSSIIMELLSATFPNLAKMKKERD--GMQKYMQIVRYLTILITLIQAVSVSVGLR 125
Query: 207 --------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISY 258
+ D ++++ ++LT G+ +IGE+I+ +GNG SL+IF I+S
Sbjct: 126 SISGGANGAIMIDMQVFMIVSAFSMLT-GTMLLMWIGEQITQRGVGNGISLIIFAGIVSG 184
Query: 259 LPASFGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
+P++ T G N + L I++ + + I+YV+ AER+IPI+YA + ++
Sbjct: 185 IPSAISGTF-NLVNTGVINILMLIGIVLIVLATIFAIIYVELAERRIPISYARKVVMQNQ 243
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGT-LARFTGIAALKKAAVALNPGGSFYLPT 375
+ Y+P K+N SGV+P IF+++ L P T L + T L+ A L+P G Y
Sbjct: 244 NKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQATSNKTLQAIADFLSPQGYAYNIL 303
Query: 376 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVF 435
LLI FF Y+Y+ + + D+++ L+R G IP +RPG+ T++FL V S++++ GS++
Sbjct: 304 MFLLIIFFAYFYSSIVFNSKDIADNLRRNGGYIPGLRPGEGTSSFLNAVASKLTLWGSLY 363
Query: 436 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE 490
LA+++ P ++ + + + F GT+VLI+V A DT +K++A+I KYK +
Sbjct: 364 LALISTVPWILVKAMGVPFY--FGGTAVLIVVQVAIDTMKKIEAQIYMSKYKTLS 416
>sp|P16336|SECY_BACSU Protein translocase subunit SecY OS=Bacillus subtilis (strain 168)
GN=secY PE=3 SV=1
Length = 431
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 230/415 (55%), Gaps = 21/415 (5%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
K + L L + R+G +IP+ VN EA Q + L++F GG + + I ++GI
Sbjct: 17 KIIFTLLMLIVFRIGAFIPVPYVNAEALQAQ-SQMGVFDLLNTFGGGALYQFSIFAMGIT 75
Query: 149 PFINAQIVFQLLAQ-INPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRP 207
P+I A I+ QLL + PK + K +GE GR+K+ Q+TRY ++ +QA+G
Sbjct: 76 PYITASIIIQLLQMDVVPKFTEWSK-QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNN 134
Query: 208 YVNDF-----STDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS 262
N L +LT G+AF ++GE+I+ +GNG S++IF I+S +P +
Sbjct: 135 LANGMLIEKSGVSTYLIIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGIVSSIPKT 194
Query: 263 FGRTVAEAFQDGN------YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSG 316
G+ F N + +A ++I+ + +++G++++Q+A RKI I YA
Sbjct: 195 IGQIYETQFVGSNDQLFIHIVKVALLVIAILAVIVGVIFIQQAVRKIAIQYAKGTGRSPA 254
Query: 317 GLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA----LNPGGSFY 372
G +S +LP KVN +GV+P+IF+ + L P T+A F G + K +P G
Sbjct: 255 GGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWIQNNFDNTHPVG--- 311
Query: 373 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLG 432
+ + LI F Y+Y F+Q++P+ +++ LK+QG IP VRPGK T + ++L R++ +G
Sbjct: 312 MAIYVALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGVRPGKMTQDRITSILYRLTFVG 371
Query: 433 SVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYK 487
S+FLA+++ P Q L GTS+LI+VG A +T ++++++++ + Y+
Sbjct: 372 SIFLAVISILPIFFIQFAGLPQSAQIGGTSLLIVVGVALETMKQLESQLVKRNYR 426
>sp|P46249|SECY_CYACA Protein translocase subunit SecY OS=Cyanidium caldarium GN=secY
PE=2 SV=2
Length = 410
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 226/406 (55%), Gaps = 12/406 (2%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+ + + ++AL RLG+++P+ G++++ F + N++ + L+ F +L + +LGI+
Sbjct: 10 RLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSVFALGII 69
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+INA I Q+L+ P L+ LQ EGE G+KK+ + T+Y S FA ++++ VL L+ Y
Sbjct: 70 PYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIVLRLQKY 129
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
D++ +++ + +L G+ ++ + IS +G G S++IF +I S +F + +
Sbjct: 130 AFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIAS----AFAKFLL 185
Query: 269 EAF--QDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPF 326
++ A+ + + IV+VQEA RK+PI A + S S +LP
Sbjct: 186 NQLFVHSIKFLDFASYFALIVFSIACIVFVQEAIRKVPIISAKQLDSTS-FYSNDYFLPL 244
Query: 327 KVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALN---PGGSFYLPTNILLIAFF 383
++N GVMPII ++S LAL + R+ G++ L +A +N P +L I FF
Sbjct: 245 RINQGGVMPIILASSLLALVDYVIRY-GLSTL-QAVYFINDILPFKILFLLLYSAFIIFF 302
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
NY Y L L+ ++S LK+ IP +RPGK T F K L +++ GS FLA + P
Sbjct: 303 NYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTLDNLTLFGSGFLAFIVLAP 362
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
+E H+ F+G A +S+LI+VG A D ++ + +I++ Y+N+
Sbjct: 363 NFLEFVFHIRVFKGLAVSSLLIVVGVAIDLIKQSKTYVIAKNYENM 408
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 240/438 (54%), Gaps = 36/438 (8%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNL-----DQNSLLSTLDSFSGG 135
F L K + + L R+G IP GV+ G L DQ+S+ S ++ FSGG
Sbjct: 8 FKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYSLINLFSGG 67
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
+ +L I ++GI+P+I A I+ QLL + P ++L K+EG++G+ K++QYTRY +V A+
Sbjct: 68 ALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEEL-KKEGQSGQAKMMQYTRYLTVALAL 126
Query: 196 VQAIGQVLY----------LRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGN 245
+Q+ G V +R D + ++ V +T G+ ++GE I++ +GN
Sbjct: 127 LQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKGVGN 186
Query: 246 GTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGL--ATIIISFILLVLGIVYVQEAERKI 303
G SLLIF I + LP G + GN G+ A ++ S ++LV+G+V+V++ +R+I
Sbjct: 187 GMSLLIFAGIATRLPTD-GMNIL-----GNSGGVVFAVVLASVLILVIGVVFVEQGQRRI 240
Query: 304 PINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKA-- 361
P+ YA R R S YLP KVN +GV+P+IF++S + +P + + +L+ +
Sbjct: 241 PVQYAKRMVGRRQYGGSSTYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNSGSLEVSDN 300
Query: 362 -------AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPG 414
A P Y+ L FF+Y+Y +Q DP + +E +K+ G IP +RPG
Sbjct: 301 WWQRNIIAHLQTPSSWQYIVLYFALTIFFSYFYVSVQYDPAEQAENMKKYGGFIPGIRPG 360
Query: 415 KSTAAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG---FAGTSVLILVGCAT 471
+ TA +L V++R+ +GS++LA++A P ++ G F GT++LILV A
Sbjct: 361 RPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAGSAGATPFGGTAILILVSVAL 420
Query: 472 DTARKVQAEIISQKYKNI 489
T ++++++++ Y+ +
Sbjct: 421 TTVKQIESQLLQSNYEGL 438
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 244/429 (56%), Gaps = 36/429 (8%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--------REAFVGNLDQNSLLSTLDSFSGGGIGRL 140
K L LG + L R+G +P GVN +EA G Q + S ++ FSGG + +L
Sbjct: 17 KILFTLGIVILYRVGAALPSPGVNFPNVQQCIKEASAGEAGQ--IYSLINLFSGGALLKL 74
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
+ ++G++P+I A I+ QLL + P+ ++L+K EG+AG+ K+ QYTRY ++ AI+QA
Sbjct: 75 TVFAVGVMPYITASIIVQLLTVVIPRFEELRK-EGQAGQSKMTQYTRYLAIALAILQATS 133
Query: 201 QVLYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
V + D S ++ V ++T G+A ++GE I++ +GNG SLL
Sbjct: 134 IVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSLL 193
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
IF I + +PA G+++ E+ G + A + I++V G+V+V++ +R+IP+ YA R
Sbjct: 194 IFVGIAARIPAE-GQSILES--RGGVVFTAVCAAALIIIV-GVVFVEQGQRRIPVQYAKR 249
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKAAVALNPG 368
R S YLP KVN +GV+P+IF++S + +P + + +G + + G
Sbjct: 250 MVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGVVGNSWWDKFVG 309
Query: 369 GSFYLPTNIL-------LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
P+N++ LI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L
Sbjct: 310 TYLSDPSNLVYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGRPTADYL 369
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQA 479
+ VLSRI++ GS++L ++A P + Q + F GT+VLI++G DT +++++
Sbjct: 370 RYVLSRITLPGSIYLGVIAVLPNLFLQIGAGGTVQNLPFGGTAVLIMIGVGLDTVKQIES 429
Query: 480 EIISQKYKN 488
+++ + Y+
Sbjct: 430 QLMQRNYEG 438
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 244/429 (56%), Gaps = 36/429 (8%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--------REAFVGNLDQNSLLSTLDSFSGGGIGRL 140
K L LG + L R+G +P GVN +EA G Q + S ++ FSGG + +L
Sbjct: 17 KILFTLGIVILYRVGAALPSPGVNFPNVQQCIKEASAGEAGQ--IYSLINLFSGGALLKL 74
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
+ ++G++P+I A I+ QLL + P+ ++L+K EG+AG+ K+ QYTRY ++ AI+QA
Sbjct: 75 TVFAVGVMPYITASIIVQLLTVVIPRFEELRK-EGQAGQSKMTQYTRYLAIALAILQATS 133
Query: 201 QVLYLR----------PYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLL 250
V + D S ++ V ++T G+A ++GE I++ +GNG SLL
Sbjct: 134 IVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSLL 193
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
IF I + +PA G+++ E+ G + A + I++V G+V+V++ +R+IP+ YA R
Sbjct: 194 IFVGIAARIPAE-GQSILES--RGGVVFTAVCAAALIIIV-GVVFVEQGQRRIPVQYAKR 249
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKAAVALNPG 368
R S YLP KVN +GV+P+IF++S + +P + + +G + + G
Sbjct: 250 MVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGVVGNSWWDKFVG 309
Query: 369 GSFYLPTNIL-------LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
P+N++ LI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L
Sbjct: 310 TYLSDPSNLVYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGRPTADYL 369
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQA 479
+ VLSRI++ GS++L ++A P + Q + F GT+VLI++G DT +++++
Sbjct: 370 RYVLSRITLPGSIYLGVIAVLPNLFLQIGAGGTVQNLPFGGTAVLIMIGVGLDTVKQIES 429
Query: 480 EIISQKYKN 488
+++ + Y+
Sbjct: 430 QLMQRNYEG 438
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 240/430 (55%), Gaps = 21/430 (4%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ----NSLLSTLDSF 132
F FK P L K L LG + + R+G +IP+ GV+ A +DQ + L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYSAVQFCIDQTKSNSGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ I +LGI+P+I A I+ QLL + P+L+ L K+EG++G K+ QYTRY +V
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQSGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLR--------PYVNDFSTD----WVLTSVTLLTLGSAFTTYIGERISD 240
A++Q G V R P N+ D LT V +T G+A ++GE I+D
Sbjct: 124 LAVLQGTGLVATARSGALFSQCPQANNIVPDDSIFTTLTMVVTMTAGTAVVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + G +I +I +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWSIKEQGDLAGGWIEFGIVIAVGLVMVALVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +G++P+IF++S L +P + +F+G A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGIIPVIFASSLLYIPALVVQFSGSTAGWA 303
Query: 361 AAVALN---PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
A + N ++ LI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 AWIQKNLADTAAPAHITVYFFLIIFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 477
A +L VL+RI+ GS++L ++A P + F GTS+LI+VG +T +++
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVPTMALAPLGANQNFPFGGTSILIIVGVGLETVKQI 423
Query: 478 QAEIISQKYK 487
++++ + Y+
Sbjct: 424 ESQLQQRNYE 433
>sp|O33006|SECY_MYCLE Protein translocase subunit SecY OS=Mycobacterium leprae (strain
TN) GN=secY PE=3 SV=1
Length = 438
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 245/429 (57%), Gaps = 39/429 (9%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVN--------REAFVGNLDQNSLLSTLDSFSGGGIGRL 140
K L LG L L R+ +P GVN +EA G + + S ++ FSGG + +L
Sbjct: 17 KILFTLGILVLYRVSAALPSPGVNYRHVQQCIQEATAG--EAGEIYSLINLFSGGALLKL 74
Query: 141 GICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIG 200
++G++P+I A I+ QLL + P+ ++L+K EG+AG+ K+ QYTRY ++ A++QA
Sbjct: 75 ---TVGVMPYITASIIVQLLTVVIPRFEELRK-EGQAGQAKMTQYTRYLAIALAVLQATS 130
Query: 201 QVLY------LRPYVNDFSTDWVLTSVTLLTL----GSAFTTYIGERISDLKLGNGTSLL 250
V L+ D +D + S+ ++ L G+A ++GE I++ +GNG SLL
Sbjct: 131 IVALAANGGLLQGCQEDIISDQSIFSLVVIVLVMTGGAALVMWMGELITERGIGNGMSLL 190
Query: 251 IFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASR 310
IF I + +PA G+ + ++ G I A + ++ +++++G+V+V++ +R+IP+ YA R
Sbjct: 191 IFVGIAARIPAE-GKQILDS--RGGVI-FAAVCLAALVIIVGVVFVEQGQRRIPVQYAKR 246
Query: 311 YTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF--TGIAALKKA------- 361
R S YLP KVN +GV+P+IF++S + +P + + +G + K+
Sbjct: 247 MVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLVRSGSGGVGKSWWDKFVG 306
Query: 362 AVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFL 421
+P Y+ LI FF Y+Y + +PD+ ++++K+ G IP +RPG+ TA +L
Sbjct: 307 TYLSDPADPVYINIYFGLIIFFTYFYVSVTFNPDERADEMKKFGGFIPGIRPGRPTADYL 366
Query: 422 KTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG--FAGTSVLILVGCATDTARKVQA 479
+ VLSRI++ GS++L +A P + Q + + F GT+VLI++G DT +++++
Sbjct: 367 RYVLSRITLPGSIYLGAIAVLPNLFLQIGNGGEVQNLPFGGTAVLIMIGVGLDTVKQIES 426
Query: 480 EIISQKYKN 488
+++ + Y+
Sbjct: 427 QLMQRNYEG 435
>sp|Q9PJN1|SECY_CHLMU Protein translocase subunit SecY OS=Chlamydia muridarum (strain
MoPn / Nigg) GN=secY PE=3 SV=1
Length = 457
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 239/424 (56%), Gaps = 31/424 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGGGIGRLGICSLGIVPFI 151
LAL R+G++IP+ G+N + V +Q +L D FSGG ++ + +LG+VP+I
Sbjct: 24 LALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFSGGAFAQMTVIALGVVPYI 83
Query: 152 NAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI------------ 199
+A I+ QLL P LQ + + G++K+ + TR ++ A VQ++
Sbjct: 84 SASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLLACVQSLLFAKFALRMNLV 143
Query: 200 --GQVLYLRPYVNDFSTDWV--LTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSI 255
G VL + F V LT+V ++T G+ +IGE+ISD +GNG SL+I +
Sbjct: 144 VPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQISDKGIGNGISLIITLGM 203
Query: 256 ISYLPASFGRTVAE---AFQDGNYIGLATIII---SFILLVLGIVYVQEAERKIPINYAS 309
++ P+ G + QD + G+ ++++ F+ +++ V + E RK+P+ +A
Sbjct: 204 LASFPSVLGSIFNKLNLGSQDPSEFGIVSLLVLCAVFVFVLMATVLIIEGVRKVPVQHAR 263
Query: 310 RYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--LKKAAVALNP 367
R R L +YLP KVN +GV+P+IF++S L P T+ +F + LK+ A L+P
Sbjct: 264 RIIGRREVLGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQFLSSESSWLKRIATMLSP 323
Query: 368 GGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSR 427
G Y +LLI FF Y++T Q P+ ++ ++K+ GA IP +R GK T ++L+ ++R
Sbjct: 324 GSVVYSIFYVLLIIFFTYFWTATQFRPEQIASEMKKNGAFIPGIRQGKPTQSYLEYTMNR 383
Query: 428 ISVLGSVFLAILAAGPAVIEQTTHLTAFRGF--AGTSVLILVGCATDTARKVQAEIISQK 485
+++LG+VFLA++A P+++ + + A + GT++LI+VG DT +++ A ++ ++
Sbjct: 384 VTLLGAVFLAVVAILPSILGRILRVDANVSYFLGGTAMLIVVGVVLDTMKQIDAFLLVRR 443
Query: 486 YKNI 489
Y +
Sbjct: 444 YDGV 447
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 240/435 (55%), Gaps = 31/435 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F FK P L K L LG + + RLG +IP+ GV+ + +DQ S L ++ F
Sbjct: 5 FAPAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNVQECVDQASGNQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D + + V +T G+ ++GE I+D
Sbjct: 124 LAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + +I T+I+ +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWAIKKQGELADGWIEFGTVILVGLVMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSTAGWA 303
Query: 361 AAVALNPGGSFYLPTNIL---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ N + P IL LI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYK 487
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYE 433
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 240/435 (55%), Gaps = 31/435 (7%)
Query: 78 FGDFFKGP-LPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNS----LLSTLDSF 132
F FK P L K L LG + + RLG +IP+ GV+ + +DQ S L ++ F
Sbjct: 5 FARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNVQECVDQASGNQGLFGLVNMF 64
Query: 133 SGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVG 192
SGG + ++ + +LGI+P+I A I+ QLL + P+L+ L K+EG+AG K+ QYTRY +V
Sbjct: 65 SGGALLQITVFALGIMPYITASIILQLLTVVIPRLEAL-KKEGQAGTAKITQYTRYLTVA 123
Query: 193 FAIVQAIGQVLYLRP------------YVNDFSTDWVLTSVTLLTLGSAFTTYIGERISD 240
AI+Q G V R V D + + V +T G+ ++GE I+D
Sbjct: 124 LAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGELITD 183
Query: 241 LKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAE 300
+GNG S+L+F SI + P++ + +I T+I+ +++V +V+V++A+
Sbjct: 184 RGIGNGMSILMFISIAATFPSALWAIKKQGELADGWIEFGTVILVGLVMVGLVVFVEQAQ 243
Query: 301 RKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKK 360
R+IP+ YA R R S Y+P KVN +GV+P+IF++S L +P + +F+ A
Sbjct: 244 RRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIVQFSNSTAGWA 303
Query: 361 AAVALNPGGSFYLPTNIL---LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKST 417
+ N + P IL LI FF ++Y + +P++V++ +K+ G IP +R G+ T
Sbjct: 304 TWITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGIRAGRPT 363
Query: 418 AAFLKTVLSRISVLGSVFLAILAAGPAVIEQTTHLTAFRG-----FAGTSVLILVGCATD 472
A +L VL+RI+ GS++L ++A P T L F F GTS+LI+VG +
Sbjct: 364 AEYLSYVLNRITWPGSLYLGLIALVP-----TMALAGFGANQNFPFGGTSILIIVGVGLE 418
Query: 473 TARKVQAEIISQKYK 487
T +++++++ + Y+
Sbjct: 419 TVKQIESQLQQRNYE 433
>sp|Q9Z7S5|SECY_CHLPN Protein translocase subunit SecY OS=Chlamydia pneumoniae GN=secY
PE=3 SV=1
Length = 457
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 239/442 (54%), Gaps = 35/442 (7%)
Query: 81 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQ-----NSLLSTLDSFSGG 135
F L K L R+G++IP+ G+N E V Q +L D FSGG
Sbjct: 8 FLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVAYFKQLLGSGQNLFQLADIFSGG 67
Query: 136 GIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAI 195
++ + +LG+VP+I+A I+ QL P LQ + + G++++ + TR +V A+
Sbjct: 68 AFAQMTVIALGVVPYISASIIVQLFLVFMPALQREMRESSDQGKRRIGRLTRLFTVALAV 127
Query: 196 VQAI--------------GQVLYLRPYVNDFSTDWV--LTSVTLLTLGSAFTTYIGERIS 239
+Q++ G VL F W+ +T+V ++T G+ +IGE+IS
Sbjct: 128 IQSLLFAKFALRMNLTIPGIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQIS 187
Query: 240 DLKLGNGTSLLIFTSIISYLPASFGRTVAE---AFQDGNYIGLATIII---SFILLVLGI 293
D +GNG SL+I I+S P+ G V + QD + +GL +I+I F+ +++
Sbjct: 188 DKGIGNGISLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLITT 247
Query: 294 VYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT 353
+ + E RKIP+ YA R R +YLP KVN +GV+P+IF++S L P T+ +F
Sbjct: 248 ILIIEGVRKIPVQYARRVIGRREVPGGGSYLPLKVNYAGVIPVIFASSLLMFPATIGQFI 307
Query: 354 GIAA--LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 411
+ +K+ A L PG Y +LLI FF Y++T Q P+ ++ ++K+ A IP +
Sbjct: 308 ASESSWMKRIAALLAPGSLVYSICYVLLIIFFTYFWTATQFHPEQIASEMKKNNAFIPGI 367
Query: 412 RPGKSTAAFLKTVLSRISVLGSVFLAILAAGPA----VIEQTTHLTAFRGFAGTSVLILV 467
R GK T +L+ ++R+++LG++FLA +A P+ ++ ++++ F G GT++LI+V
Sbjct: 368 RQGKPTQHYLEYTMNRVTLLGALFLAAIAILPSLLGCLLRVDSNVSYFLG--GTAMLIVV 425
Query: 468 GCATDTARKVQAEIISQKYKNI 489
G DT ++V A ++ ++Y ++
Sbjct: 426 GVVLDTMKQVDAFLLMRRYDSV 447
>sp|Q37143|SECY_ANTSP Protein translocase subunit SecY OS=Antithamnion sp. GN=secY PE=3
SV=1
Length = 405
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 226/394 (57%), Gaps = 12/394 (3%)
Query: 89 KFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIV 148
+F L L L+R+GI+IP+ G++ + F + QN +++ L+ F+GGG +GI +LGIV
Sbjct: 10 RFTITLVILFLARVGIFIPISGIDHQTFNNTIQQNGIINFLNIFAGGGFSTIGIFALGIV 69
Query: 149 PFINAQIVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY 208
P+I A I+ QLL ++ P L++LQK EGE GR+K+ Q TRY ++ +A++Q+ L + +
Sbjct: 70 PYIYASIIIQLLIKLIPYLENLQKEEGEIGRQKINQLTRYLTLLWALIQS----LSIAIW 125
Query: 209 VNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA 268
+N + LT S + E IS+ +GNG SLLIF +IIS +P +
Sbjct: 126 INHMYLIHLFELCASLTTSSMIAMWFSEIISEYGVGNGPSLLIFQNIISSIPKNLQN--- 182
Query: 269 EAFQDG--NYIGLATIIISF-ILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
F G N + ++I+SF I++++ + +QE ERKI I +++ + L
Sbjct: 183 YTFNIGTTNTVLNGSLILSFGIIILIINILIQEGERKIAI-LSAKQLGKINELNHKVIFL 241
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNY 385
K+N GVMP +F+++ + ++ T + + L P YLP ++ I F+Y
Sbjct: 242 LKLNQGGVMPFVFASAVVHTFLFISNNTNSKITQFINLFL-PNQFLYLPLYLIFIITFSY 300
Query: 386 YYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGPAV 445
YT L L+P+D+++ LK+ GASIP +RPG T +L T ++R++++G+ FL + P +
Sbjct: 301 VYTSLILNPEDIAKNLKKMGASIPNIRPGSETIKYLNTRINRLTLIGACFLFTITLFPTI 360
Query: 446 IEQTTHLTAFRGFAGTSVLILVGCATDTARKVQA 479
+ +G TS+LILVG A DTA+++Q
Sbjct: 361 TYYIFKINTLKGLGATSLLILVGVAIDTAKQIQT 394
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 221/409 (54%), Gaps = 24/409 (5%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
LA RLG +IP GV+ + L Q + ++ FSGG R I +LGI+P+I A
Sbjct: 25 LAAYRLGAFIPTPGVDLDKIQEFLRTAQGGVFGIINLFSGGNFERFSIFALGIMPYITAA 84
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAI-----------GQVL 203
I+ Q+L + P L+ L K EGE GR+ + QYTR + Q G+
Sbjct: 85 IIMQILVTVVPALEKLSK-EGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGR-- 141
Query: 204 YLRPYVNDFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSII-SYLPAS 262
+L P + W + VT + G A ++ ERI++ +GNGTSL+IF I+ +LP
Sbjct: 142 FLLPGWSPGPFFWFVVVVTQVA-GIALLLWMAERITEYGIGNGTSLIIFAGIVVEWLPQI 200
Query: 263 FGRTVAEAFQDG--NYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQR 320
RT+ + G N + + +L G+ VQ+AER+IP+ YA + R +
Sbjct: 201 L-RTIG-LIRTGEVNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYARKVVGRRVYGGQ 258
Query: 321 SAYLPFKVNSSGVMPIIFSTSSLALPGTLAR-FTGIAALKKAAVALNPGGSFYLPTNILL 379
+ Y+P K+N++GV+PIIF+ + L +P LA F L+ A NP L +LL
Sbjct: 259 ATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFNPTRPSGLFIEVLL 318
Query: 380 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAIL 439
+ F Y YT +Q DP ++E L+ G IP +RPG+ T FL+ ++SR+++ G++FL ++
Sbjct: 319 VILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTVKFLEHIVSRLTLWGALFLGLV 378
Query: 440 AAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN 488
P +I+ T + + F+G +LI+VG A DT R+V+++++ + Y+
Sbjct: 379 TLLPQIIQNLTGIHSI-AFSGIGLLIVVGVALDTLRQVESQLMLRSYEG 426
>sp|Q68W98|SECY_RICTY Protein translocase subunit SecY OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=secY PE=3 SV=1
Length = 433
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 232/406 (57%), Gaps = 17/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R+G +IP+ G++ A V +Q +L + SGG +GR+ I +L I+P+I A
Sbjct: 24 LIICRIGSFIPIPGIDSIALNSVAEKNQFGILGMFNMLSGGSLGRMSIFALAIMPYITAS 83
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST 214
I+ QL++ L++L K+EGE+G++K+ Q +RY +V A QA G L L V +
Sbjct: 84 IIIQLMSVAYKPLENL-KKEGESGKRKINQLSRYLTVLLASFQAYGVALSLESMVTNTGP 142
Query: 215 DWVL-------TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
+L T+V L +G+ ++GE+I+ +GNGTSL+IF IIS +P++ ++
Sbjct: 143 VVILAGFFFRVTTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAI-ISM 201
Query: 268 AEAFQDGNYIGLA--TIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
E + G L T+ I +LL+ I++ ++A+RK+ + Y R + ++P
Sbjct: 202 FELSRKGALSPLIAITVCIGVVLLIAIIIFFEKAQRKLLVQYPKRQVGNKIYGGEATHMP 261
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVA--LNPGGSFYLPTNILLIAFF 383
K+N+SGV+P IF++S L P TLA F+ + + ++ L G Y+ ++LI FF
Sbjct: 262 LKLNTSGVIPPIFASSILLFPTTLANFSNSNSETMSMLSYYLGHGKPVYILLYVVLIMFF 321
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
+++YT + + ++ + L++ GA IP RPGK+T+ + +L+R++V+G ++L+I+ P
Sbjct: 322 SFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGLYLSIICVIP 381
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ G GTS LI+V DT ++Q + S KY+ +
Sbjct: 382 ELLMNKYVISLSLG--GTSFLIVVNVVLDTMTQIQTYLFSSKYEGL 425
>sp|F6CD01|SECY1_LACKZ Protein translocase subunit SecY 1 OS=Lactobacillus kefiranofaciens
(strain ZW3) GN=secY PE=3 SV=1
Length = 431
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 227/412 (55%), Gaps = 32/412 (7%)
Query: 97 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIV 156
L L R+G I + G+N +A + + Q L+ LD+ SGGG+ I SLG+ P+I AQIV
Sbjct: 25 LLLYRIGANITVPGINVKA-ITQVAQTGLVPMLDTVSGGGLDNYSIFSLGVSPYITAQIV 83
Query: 157 FQLL-AQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPY-----VN 210
QLL I P L + K +GE GR+K Q TRY ++ A VQ+IG L V
Sbjct: 84 IQLLQMDIVPTLVEWGK-QGEVGRRKTNQVTRYLTLVVAFVQSIGITLGFNALTQMGLVK 142
Query: 211 DFSTDWVLTSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEA 270
+ + + ++T G+ T++G+ I+D LGNG S++IF II+ LP+ + E
Sbjct: 143 NQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNGVSVIIFAGIIARLPSGLYQIYKEE 202
Query: 271 FQDGN-------YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAY 323
+ + + +I++ +++ + +V++A+R+IPI Y R T SG ++
Sbjct: 203 IINNSASDRWQGILFFIAVIVAILIVTQLVTWVEQADRRIPIQYTRRATI-SGS---ESF 258
Query: 324 LPFKVNSSGVMPIIFSTSSLALPGTL----ARFTGIAALKKA-----AVALNPGGSFYLP 374
LP KVN SGV+P+IF++S + P T+ R G K ++ PG Y
Sbjct: 259 LPLKVNVSGVIPVIFASSFIVTPATILMAFQRTQGDQQWFKVMNQIFSLQTTPGVIIY-- 316
Query: 375 TNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSV 434
LLI F ++Y F+Q++P+ ++E L++QGA IP V PGK T ++ +L ++S +GS+
Sbjct: 317 --TLLIILFTFFYAFVQVNPEKLAENLQKQGAYIPSVWPGKDTQDYVSKMLIKLSTVGSI 374
Query: 435 FLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKY 486
FL ++A P + +L + G GTS+LI++G + +R++ ++ ++Y
Sbjct: 375 FLGLVALLPQLATNFWNLPSSIGLGGTSLLIVIGVVLELSRQINGLLMKREY 426
>sp|Q1RHP1|SECY_RICBR Protein translocase subunit SecY OS=Rickettsia bellii (strain
RML369-C) GN=secY PE=3 SV=1
Length = 433
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 230/406 (56%), Gaps = 17/406 (4%)
Query: 97 LALSRLGIYIPLGGVNREAF--VGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQ 154
L + R G +IP+ G++ A + +Q+ +L + SGG +GR+ I +L I+P+I A
Sbjct: 24 LIICRFGSFIPIAGIDAIALGSIAEKNQSGILGMFNMLSGGSLGRMSIFALAIMPYITAS 83
Query: 155 IVFQLLAQINPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFST 214
I+ QL++ L++L K+EGEAG++K+ Q +RY +V A +QA G + L V +
Sbjct: 84 IIIQLMSVAYKPLENL-KKEGEAGKRKINQLSRYLTVLLASLQAYGVAVSLESIVTNTGP 142
Query: 215 DWVL-------TSVTLLTLGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTV 267
++ T+V L +G+ ++GE+I+ +GNGTSL+IF IIS +P++ ++
Sbjct: 143 VVIIPGLFFKITTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAI-ISM 201
Query: 268 AEAFQDGNYIGLATIIIS--FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLP 325
E + G L I + ++L+ I++ ++A+RK+ + Y R S Y+P
Sbjct: 202 FELSRKGALSPLVAIAVCAGVVILISIIIFFEKAQRKLLVQYPKRQVGNKIYGGDSTYMP 261
Query: 326 FKVNSSGVMPIIFSTSSLALPGTLARFTGIAA--LKKAAVALNPGGSFYLPTNILLIAFF 383
K+N+SGV+P IF++S L P TLA F+ + + L G Y+ + LI FF
Sbjct: 262 LKLNTSGVIPPIFASSILLFPATLANFSSSNSEIMNMLTYYLGHGKPIYILLYVALIMFF 321
Query: 384 NYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLAILAAGP 443
+++YT + + ++ + L++ GA IP RPGK+T+ + +L+R++V+G ++L+++ P
Sbjct: 322 SFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSEYFDYILTRLTVVGGIYLSVICIIP 381
Query: 444 AVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI 489
++ ++ G GTS LI+V DT ++Q + S KY+++
Sbjct: 382 ELLMNKYVISLSLG--GTSFLIVVNVVLDTLTQIQTYLFSSKYESL 425
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,618,963
Number of Sequences: 539616
Number of extensions: 7104835
Number of successful extensions: 18415
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 17884
Number of HSP's gapped (non-prelim): 121
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)