BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010830
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 217/435 (49%), Gaps = 8/435 (1%)
Query: 49 ISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRG 108
++ A+ I ++L + ++SAL +G+ + ++V +VL ++ FF+W+ +
Sbjct: 68 VADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQ 127
Query: 109 QRL--SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEA 166
+ S A+++M++ K +++ MW+ + M++ +L++ TF + Y A K DEA
Sbjct: 128 RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEA 187
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
+ +F+VM + + ++VA N LLSA+C+ +N +A E ++ PD +++ILLEG
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-VRKAQEVFENMRDRFTPDSKTYSILLEG 246
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 286
W KE N+ +A + F EM++ +P+ ++ Y + L + +VDEAL +R M C
Sbjct: 247 WGKEPNLPKAREVFREMIDA-GCHPD-IVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 287 PTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVF 346
PT +S + N AV + M G + ++ ++N++IG C + + NV+
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG--MKADVAVFNSLIGAFCKANRMKNVY 362
Query: 347 RFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITML 406
R +M G P+S + N+I LI+ E F +MIK +P I M
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMF 421
Query: 407 LDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYE 466
+ E E A ++W Y+ + G+ P + + L+ GL EEM+ I
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 467 VTMHKLKKAFYNESR 481
VT +L++ E R
Sbjct: 482 VTFGRLRQLLIKEER 496
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 123/304 (40%), Gaps = 13/304 (4%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMS 174
A+N ++ L K+ + M++ T++ + + + +A F M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 175 MHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK----IVDPDGDSFAILLEGWEKE 230
G D+V + ++ +C+ R E L V+ I P +++L+ + E
Sbjct: 265 DAGCHPDIVTYSIMVDILCK----AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+EEA TF EM ER + V + + + + ++ + L+ MK + P K
Sbjct: 321 NRLEEAVDTFLEM-ERSGMKAD-VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFD 350
+ L L++ + A ++ M+ + P+ Y VI + C +++ + +
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMIKV---CEPDADTYTMVIKMFCEKKEMETADKVWK 435
Query: 351 QMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDAD 410
M G FP T++++ L + + + EMI+ +P+ + +L+ +
Sbjct: 436 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Query: 411 EPEI 414
++
Sbjct: 496 REDV 499
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 224/465 (48%), Gaps = 23/465 (4%)
Query: 42 THLDAPYISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDF 101
T + A S A IC+IL + +E+ L + +P L+ EVL+ ++ A+
Sbjct: 55 TQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSV 114
Query: 102 FRWA--GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCG 159
F+WA +G + + +N +++ LGK +F+ +W+ V MK +LS TFA I Y
Sbjct: 115 FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR 174
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
A K EA+ +F M G + + N +L + + N F KK +PD S
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 234
Query: 220 FAILLEGWEKEGN---VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF 276
+ ILLEGW +E N V+E N+ + E FE P+ V+AY + + K+ +EA++F
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKD--EGFE--PD-VVAYGIIINAHCKAKKYEEAIRF 289
Query: 277 LRVMKGENCFPTLKFFS---NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVI 333
M+ NC P+ F N L KLND A++ ++ GF L YNA++
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLND---ALEFFERSKSSGFPL--EAPTYNALV 344
Query: 334 GLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQ 393
G C + +++ ++ D+M G P++ TY++I LI+ +R E + + M +
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCE 401
Query: 394 PTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRF 453
PT + M + + ++AI+IW+ + G+LP + L+ L + +L + +
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 454 AEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERRCKT 496
EML+ I +LK+ +E R + D+ ++R KT
Sbjct: 462 FNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKT 506
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 214/446 (47%), Gaps = 11/446 (2%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 134 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 193
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M+++ P+ ++A+ L L+R ++ +A+K VMK + P ++
Sbjct: 313 NLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
++ + K + A++ +D MV G L P+ +Y +I +D V+ +
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 411
M G PD TYN + + + K + +++MI+NE +P+ + A
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 412 PEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHK 471
E+ +W +++ GI P + S L+ GL G+ + R+ EEML++ + + +K
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 472 LKKAFYNESRSMRDIFDSLERRCKTS 497
F+ + +IF+ L +R K S
Sbjct: 549 FAADFHRGGQP--EIFEELAQRAKFS 572
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 214/446 (47%), Gaps = 11/446 (2%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 133 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 192
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 252
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 253 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 311
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M++ P+ ++A+ L L+R + +A+K VMK + P ++
Sbjct: 312 NLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
++ + K + A++ +D MV G L P+ +Y +I +D V+ +
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 411
M G PD TYN + + + K + +++MI+NE +P+ + A
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 412 PEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHK 471
E+ +W+ +++ GI P + S L+ GL + G+ + R+ EEML++ + + +K
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 472 LKKAFYNESRSMRDIFDSLERRCKTS 497
F+ + +IF+ L +R K S
Sbjct: 548 FAADFHRGGQP--EIFEELAQRAKFS 571
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 214/446 (47%), Gaps = 11/446 (2%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 134 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 193
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 194 ASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M++ P+ ++A+ L L+R + +A+K VMK + P ++
Sbjct: 313 NLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
++ + K + A++ +D MV G L P+ +Y +I +D V+ +
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 411
M G PD TYN + + + K + +++MI+NE +P+ + A
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 412 PEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHK 471
E+ +W+ +++ GI P + S L+ GL + G+ + R+ EEML++ + + +K
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 472 LKKAFYNESRSMRDIFDSLERRCKTS 497
F+ + +IF+ L +R K S
Sbjct: 549 FAADFHRGGQP--EIFEELAQRAKFS 572
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 189/414 (45%), Gaps = 11/414 (2%)
Query: 66 DDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRL--SPYAWNLMVDVL 123
DD+E L + +LV +VL+ + A FF WA R S +++++V++L
Sbjct: 53 DDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEIL 112
Query: 124 GKNGRFEQMWNAVRVMKEDGVLSLPT--FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQD 181
G + +F +W+ + +E + + F +F +Y A EA +F+ M G++
Sbjct: 113 GSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPC 172
Query: 182 VVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTF 240
V ++ LL ++C + + A EF + K + P +++IL+ GW + + A K F
Sbjct: 173 VDDLDQLLHSLC-DKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVF 231
Query: 241 GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 300
EM+ER +LAY L L + VD K + M P F+ +
Sbjct: 232 DEMLERN--CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 301 KLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPD 360
D A ++ D M ++L+PN+ +N +I LC N+ VD+ + D+M+ GA PD
Sbjct: 290 DAGDVHSAYKVLDRMKR--YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 361 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 420
+ TYN I + V+ K M + + P + +L+ + A EIW
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
Query: 421 YILENGILPLEASANELLVGL-RNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 473
+ E P A+ ++ GL R G+L + R+ E M++ I Y T+ L+
Sbjct: 408 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 184/387 (47%), Gaps = 14/387 (3%)
Query: 98 AVDFFRWAGRGQ---RLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASI 153
++ FF WA SP+ +N M+D+ GK +F+ W+ + +MK V +S+ TF +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 154 FDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV 213
Y AG EAV F+ M +G D +A + ++S + R+ + S A F + +K
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR-RASEAQSFFDSLKDRF 251
Query: 214 DPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA 273
+PD + L+ GW + G + EA K F EM + +V Y + L R Q+ A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEM--KLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 274 LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVI 333
M C P F+N + + VK + +Q+++ M +G P+ I YN +I
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE--PDTITYNFLI 367
Query: 334 GLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQ 393
C +++++N + + M+ ++ T+N IF + K + V+ + + +M++ + +
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 394 PTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRF 453
P + + M + + ++ +++ + + + P + L+ +G ++ +
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Query: 454 AEEMLNRRIL-----IYEVTMHKLKKA 475
+EM+ + L +YE+ + +L++A
Sbjct: 488 FKEMVEEKCLTPSLSLYEMVLAQLRRA 514
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 173/368 (47%), Gaps = 45/368 (12%)
Query: 58 EILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWA--GRGQRLSPYA 115
++ SSD+I C + + LVH++L D SA+ +WA +G + S A
Sbjct: 69 DVFKRLSSDEI-----CKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDA 123
Query: 116 WNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSM 175
+++ VD+LGK ++++M V M+ D +++L T A I + GAG+++EAV FD +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 176 HGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEE 235
G+E++ ++N LL +C+ E + +A L ++K + P+ +F I + GW K VEE
Sbjct: 184 FGLEKNTESMNLLLDTLCK-EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 236 ANKTFGEM-------------------VERFEW--------------NPEHVLAYETFLI 262
A T EM ++FE+ +P + + Y T +
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDI-MVGIGFN 321
+L K+ +EAL+ MK C P F++ + L + A +++ + M +G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 322 LMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHG-AFPDSLTYNMIFECLIKNKRVHEV 380
+ N YN++I + C++D+ D +M PD TY + K V EV
Sbjct: 363 I--NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV 420
Query: 381 EKFFHEMI 388
K EM+
Sbjct: 421 GKLLKEMV 428
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 9/202 (4%)
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE-RFEWNPEHVLAYET 259
R EF+ R++ ++ A ++ + G EEA F + E E N E +
Sbjct: 139 RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE---SMNL 195
Query: 260 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIG 319
L TL + K+V++A L +K + P F+ + K N A LW I G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKG 252
Query: 320 FNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHE 379
P +I Y +I C + V+ +M +G+ P+S+TY I L K E
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 380 VEKFFHEMIKNEWQPTPL--NC 399
+ M ++ +P L NC
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNC 334
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Query: 314 IMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 373
+++ + ++ PN +N I C + V+ +M HG P ++Y I C +
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 374 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 433
+V + EM N P + T ++ L E E A+ + + +G P
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 434 ANELLVGLRNLGRLSDVRR-FAEEM 457
N L+ L GRL + R F EM
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEM 356
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFAS-IFDSYCGAGKYDEAVMSFDV- 172
+ ++ L FE+ MK G F + + + AG+ +EA F V
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK--IVDPDGDSFAILLEGWEKE 230
M GV + NS+++ C + + +A+E L ++ + +PD ++ LL K
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEE-DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFP 287
G+V E K EMV + + + + TFLI L R + A M ++ P
Sbjct: 415 GDVVEVGKLLKEMVTKHHLSLDE--STYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 199/451 (44%), Gaps = 39/451 (8%)
Query: 66 DDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS--PYAWNLMVDVL 123
DD+E AL + + T +V ++LQ +A FF WAG + S P A+N M+D+L
Sbjct: 110 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 169
Query: 124 G----KNGRFEQMWNAVRVMKEDG--VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHG 177
KN +F + + + MK + V+ + I YC +Y V F
Sbjct: 170 SSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCE--RYLTHVQKFAKRKRIR 227
Query: 178 VEQ--DVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEE 235
V+ ++ A N LL A+C+ L R++ V PD ++F +L GW + + ++
Sbjct: 228 VKTQPEINAFNMLLDALCKC-GLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 236 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGENC-FPTLKFF 292
A K EM+E PE+ Y + T + VDEA M KG PT K F
Sbjct: 287 AMKLLEEMIEAGH-KPEN-FTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 293 SNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQM 352
+ + L K + + +L M+ G +P++ Y VI +C + VD ++F D+M
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTG--CLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 353 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 412
G PD +TYN L +N++ E K + M+++ P+ I+M + D+P
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 413 EIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI-LIYEV---- 467
+ A W + + + + ++ GL + R + EE++N+ + L Y V
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 468 -----------TMHKLK---KAFYNESRSMR 484
+HK+ K FYN S + R
Sbjct: 523 LMRLSEVGNLKAIHKVSEHMKKFYNHSMARR 553
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 183/401 (45%), Gaps = 17/401 (4%)
Query: 72 LACTGIIP-TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPY---AWNLMVDVLGKNG 127
L T P TP+LV+ VL+ ++ A+ FF + R + +++L +D+ +
Sbjct: 46 LLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 105
Query: 128 RFEQMWNAVRVMKEDGVLSLP-TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVN 186
+W+ + M+ + P TFA + + Y AGK D+AV F M HG QD+ + N
Sbjct: 106 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFN 165
Query: 187 SLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVER 246
++L +C+ + + +A E ++ D ++ ++L GW +A + EMVER
Sbjct: 166 TILDVLCKSK-RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 247 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 306
NP ++ Y T L R Q+ A +F MK +C + ++ + +
Sbjct: 225 -GINP-NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 307 HAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNM 366
A ++D M+ G ++P++ YNA+I +LC D+V+N F++MV G P+ TYN+
Sbjct: 283 RARNVFDEMIREG--VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 367 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 426
+ L E+ M +P I + E E A+ ++ +
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 427 ILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEV 467
LP + N L+ G+ VR+ +E+M+ L+ E+
Sbjct: 401 CLPNLDTYNILISGM-------FVRKRSEDMVVAGKLLLEM 434
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 343 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 402
D + F M HG F D ++N I + L K+KRV + + F + + + +
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVI 201
Query: 403 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR-- 460
+ A+E+ ++E GI P + N +L G G++ F EM R
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 461 --RILIYEVTMHKLKKAFYNESRSMRDIFDSLER 492
++ Y +H A E + R++FD + R
Sbjct: 262 EIDVVTYTTVVHGFGVA--GEIKRARNVFDEMIR 293
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 202/430 (46%), Gaps = 16/430 (3%)
Query: 39 RFPTHLDAPYISSSARIICEILAH---ASSDDIESALACTGIIPTPDLVHEVLQLSYD-- 93
+FP + SA + I+ H +S + I+ L GI T +LV EV+ +
Sbjct: 64 KFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDW 123
Query: 94 SPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFAS 152
P+ + S +N ++DVLGK RFE+ M K DG ++ T+
Sbjct: 124 KPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEV 183
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI 212
+ + Y A K DEAV F+ G++ D+VA + LL +CR ++ F +R ++
Sbjct: 184 LLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREF 243
Query: 213 VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDE 272
D + ++L GW GNV EA + + +++ + P+ V++Y T + L + ++ +
Sbjct: 244 -GCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS-KCRPD-VVSYGTMINALTKKGKLGK 300
Query: 273 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAV 332
A++ R M P +K +N +D L A++++ + G + PN++ YN++
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD--PNVVTYNSL 358
Query: 333 IGLLCNNDDVDNVFRFFDQMVFHGA--FPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 390
+ LC + V+ ++M G P+ +T++ + L ++R +V+ M KN
Sbjct: 359 LKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKN 415
Query: 391 EWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDV 450
+ + T + + D+ E EIW+ + +G+ P + + + GL G++ +
Sbjct: 416 KCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEA 475
Query: 451 RRFAEEMLNR 460
+ +EM+++
Sbjct: 476 LSYFQEMMSK 485
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 10/357 (2%)
Query: 127 GRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAV 185
G+ + + +++ G + + T+ + YC AG+ + A+ D MS V DVV
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207
Query: 186 NSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMV 244
N++L ++C + +A+E L+R +++ PD ++ IL+E ++ V A K EM
Sbjct: 208 NTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 245 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 304
+R P+ V+ Y + + + ++DEA+KFL M C P + + L +
Sbjct: 267 DR-GCTPD-VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 305 STHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTY 364
A +L M+ GF+ P+++ +N +I LC + ++M HG P+SL+Y
Sbjct: 325 WMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 365 NMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILE 424
N + K K++ ++ M+ P + T +T L + E A+EI N +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 425 NGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
G P+ + N ++ GL G+ + +EM + + +T L E +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 38/384 (9%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N ++ L +G+ +Q + R+++ D + T+ + ++ C A+ D M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLEGWEKEGN 232
G DVV N L++ IC+ E + A++FLN + P+ + I+L G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 233 VEEANKTFGEMVER----------------------------FEWNPEH-----VLAYET 259
+A K +M+ + E P+H L+Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 260 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIG 319
L + K++D A+++L M C+P + ++ L L K AV++ + + G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 320 FNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHE 379
+ P LI YN VI L + D+M PD++TY+ + L + +V E
Sbjct: 445 CS--PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 380 VEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLV 439
KFFHE + +P + + + L + + + AI+ +++ G P E S L+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 440 GLRNLGRLSDVRRFAEEMLNRRIL 463
GL G + E+ N+ ++
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLM 586
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 140/303 (46%), Gaps = 11/303 (3%)
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICR--QENQTSRALEFLNRVKKIVDPDG 217
G+ +E + M HG D++ +L+ CR + + ++ LE L + PD
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV--PDV 172
Query: 218 DSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL 277
++ +++ G+ K G + A +++R +P+ V+ Y T L +L ++ +A++ L
Sbjct: 173 ITYNVMISGYCKAGEINNAL----SVLDRMSVSPD-VVTYNTILRSLCDSGKLKQAMEVL 227
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLC 337
M +C+P + ++ ++ + + HA++L D M G P+++ YN ++ +C
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT--PDVVTYNVLVNGIC 285
Query: 338 NNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPL 397
+D +F + M G P+ +T+N+I + R + EK +M++ + P+ +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 398 NCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
I L AI+I + ++G P S N LL G ++ + E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 458 LNR 460
++R
Sbjct: 406 VSR 408
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 200/460 (43%), Gaps = 58/460 (12%)
Query: 56 ICEIL--AHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGR--GQRL 111
+C+ L S +D+ L+ ++ T LV +VL+ + + A FF WA G
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 112 SPYAWNLMVDVLGKNGRFEQMWNAVRVM---KEDGVLSLPTFASIFDSYCGAGKYDEAVM 168
S + +N MVDVLGK F+ MW V M +E +++L T + + +GKY++AV
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 169 SF-DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG- 226
+F ++ +GV+ D +A+NSL+ A+ + EN A E ++ + PD +F IL+ G
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVK-ENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283
Query: 227 ----------------------------------WEKEGNVEEANKTFGEMVERFEWNPE 252
+ KEG+ N+ EM E NP
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN-GCNP- 341
Query: 253 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLW 312
+V+ Y + +L + KQV EAL MK + C P KF+S+ + IL K A +++
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 313 DIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQM---VFHGAFPDSLTYNMIFE 369
+ M G + ++++YN +I ++ + R +M P+ TY + +
Sbjct: 402 EDMTNQG--VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLK 459
Query: 370 CLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILP 429
K++ + H M+KN+ I L + + E A + + G++P
Sbjct: 460 MCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Query: 430 LEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTM 469
+++ L+ L + AE L + L+ TM
Sbjct: 520 RDSTCKMLVDELEK-------KNMAEAKLKIQSLVQSKTM 552
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 9/350 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N +V+ L K G + + VM ++G + T+ S+ C G+ EAV D
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV--KKIVDPDGDSFAILLEGWEKE 230
M + V N+L+S +C+ ENQ A E L RV K + PD +F L++G
Sbjct: 356 MITRDCSPNTVTYNTLISTLCK-ENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
N A + F EM R + Y + +L ++DEAL L+ M+ C ++
Sbjct: 414 RNHRVAMELFEEM--RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFD 350
++ +D K N + A +++D M G + N + YN +I LC + V++ + D
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVS--RNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 351 QMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDAD 410
QM+ G PD TYN + + + + M N +P + T I+ L A
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 411 EPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
E+A ++ I GI + N ++ GL + ++ EML +
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 145/386 (37%), Gaps = 79/386 (20%)
Query: 96 SSAVDFFRWAGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFAS 152
S+A+ F A + SP + ++ LG++G F+ M + MK + TF
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 153 IFDSYCGAGKYDEAV------------------------------------MSFDVMSMH 176
+ +SY DE + +S MS+
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEA 236
G++ DV N L+ A+CR L + + PD +F +++G+ +EG+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 237 NKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
+ +MVE W+ ++ + + +V++AL F++ M ++ F
Sbjct: 244 LRIREQMVEFGCSWSN---VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF--------- 291
Query: 296 LDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
P+ +N ++ LC V + D M+
Sbjct: 292 ---------------------------FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 415
G PD TYN + L K V E + +MI + P + T I+ L ++ E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 416 IEIWNYILENGILPLEASANELLVGL 441
E+ + GILP + N L+ GL
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGL 410
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 2/238 (0%)
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
LL+ + + A + F ++ ++PE L YE L+ L R D+ K L MK
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPAL-YEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDV 342
C F ++ + + + D M+ F L P+ YN ++ LL + + +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMID-EFGLKPDTHFYNRMLNLLVDGNSL 170
Query: 343 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 402
V +M G PD T+N++ + L + ++ +M P T
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 403 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
+ ++ + + A+ I ++E G S N ++ G GR+ D F +EM N+
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 10/334 (2%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L T +++ + C G+ EA++ D M +G + D V +L+ +C+ N ++ AL+
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-SALALDLF 233
Query: 207 NRVK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
+++ + + ++I+++ K+G+ ++A F EM + V+ Y + + L
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM--EMKGIKADVVTYSSLIGGLC 291
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPN 325
+ D+ K LR M G N P + FS +D+ VK A +L++ M+ G + P+
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG--IAPD 349
Query: 326 LIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 385
I YN++I C + + + FD MV G PD +TY+++ K KRV + + F
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 386 EMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 445
E+ P + T + + + A E++ ++ G+ P + LL GL + G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 446 RLSDVRRFAEEMLNRR----ILIYEVTMHKLKKA 475
L+ E+M R I IY + +H + A
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 155/336 (46%), Gaps = 5/336 (1%)
Query: 123 LGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQD 181
L K+G + R M+E + S+ ++ + DS C G +D+A+ F+ M M G++ D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 182 VVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFG 241
VV +SL+ +C A + + + PD +F+ L++ + KEG + EA + +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 242 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 301
EM+ R P+ + Y + + + + EA + +M + C P + +S ++ K
Sbjct: 340 EMITR-GIAPDTI-TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 302 LNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDS 361
++L+ + G L+PN I YN ++ C + ++ F +MV G P
Sbjct: 398 AKRVDDGMRLFREISSKG--LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 362 LTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNY 421
+TY ++ + L N +++ + F +M K+ I + +A + + A ++
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 422 ILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
+ + G+ P + N ++ GL G LS+ +M
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 146/315 (46%), Gaps = 6/315 (1%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF+++ + +C G+ EAV D M D+V V++L++ +C + + S AL ++R
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK-GRVSEALVLIDR 200
Query: 209 -VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
V+ PD ++ +L K GN A F +M ER V+ Y + +L +
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER--NIKASVVQYSIVIDSLCKD 258
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
D+AL M+ + + +S+ + L ++ M IG N++P+++
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVV 316
Query: 328 MYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
++A+I + + +++M+ G PD++TYN + + K +HE + F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 388 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
+ +P + + I A + + ++ I G++P + N L++G G+L
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 448 SDVRRFAEEMLNRRI 462
+ + +EM++R +
Sbjct: 437 NAAKELFQEMVSRGV 451
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 147/335 (43%), Gaps = 43/335 (12%)
Query: 98 AVDFFR-WAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFASIFD 155
A+D FR R + S +++++D L K+G F+ + M+ G+ + + T++S+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVD 214
C GK+D+ M + DVV ++L+ + E + A E N + + +
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-EGKLLEAKELYNEMITRGIA 347
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
PD ++ L++G+ KE + EAN+ F MV + P+ ++ Y + + + K+VD+ +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPD-IVTYSILINSYCKAKRVDDGM 405
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIG 334
+ R + + P ++ + + A +L+ MV G + P+++ Y ++
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG--VPPSVVTYGILLD 463
Query: 335 LLCNNDDVDNVFRFFDQM--------------VFHGAF---------------------P 359
LC+N +++ F++M + HG P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 360 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 394
D +TYN++ L K + E + F +M ++ P
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 17/269 (6%)
Query: 108 GQRLSP--YAWNLMVDVLGKNGRF---EQMWNAV--RVMKEDGVLSLPTFASIFDSYCGA 160
G+ + P ++ ++DV K G+ ++++N + R + D + T+ S+ D +C
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI----TYNSLIDGFCKE 363
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
EA FD+M G E D+V + L+++ C+ + F K + P+ ++
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
L+ G+ + G + A + F EMV R P V+ Y L L ++++AL+ M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIG-FNLMPNLIMYNAVIGLLCNN 339
+ + ++ I+ + +++ W + + + P+++ YN +IG LC
Sbjct: 482 QKSRMTLGIGIYNI---IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIF 368
+ F +M G PD TYN++
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 306 THAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYN 365
+ AV L D MV + P+L+ + +I LC V D+MV +G PD +TY
Sbjct: 157 SEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 366 MIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 425
+ L K+ F +M + + + + + I L + A+ ++N +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 426 GILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
GI + + L+ GL N G+ D + EM+ R I+ VT L F E +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 72 LACTGIIPTPDLVHEVLQLSY---DSPSSAVDFFR-WAGRGQRLSPYAWNLMVDVLGKNG 127
++ G+IP + + L L + ++A + F+ RG S + +++D L NG
Sbjct: 411 ISSKGLIPNT-ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 128 RFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVN 186
+ M++ + L + + I C A K D+A F +S GV+ DVV N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 187 SLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILL 224
++ +C++ + + + F + PD ++ IL+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 167/356 (46%), Gaps = 6/356 (1%)
Query: 92 YDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
++ S AV R RG + + + ++V+ L K G + +N + M+ + ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
++++ DS C D+A+ F M GV +V+ +SL+S +C E + + + +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
++ ++P+ +F L++ + KEG + EA K + EM++R +P+ + Y + + +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDR 380
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
+DEA +M ++CFP + ++ ++ K V+L+ M G L+ N + Y
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG--LVGNTVTY 438
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
+I D DN F QMV G P+ +TYN + + L KN ++ + F + +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 445
++ +PT I + A + E +++ + G+ P N ++ G G
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 164/390 (42%), Gaps = 19/390 (4%)
Query: 112 SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSF 170
S + +N ++ + K +F+ + + M+ G+ +L T+ + + +C + A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 171 DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEK 229
M G E +V ++SLL+ C + + S A+ ++++ ++ PD +F L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 230 EGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 289
EA MV+R P +++ Y + L + +D A L M+ +
Sbjct: 203 HNKASEAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 290 KFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFF 349
+S +D L K A+ L+ M G + PN+I Y+++I LCN + + R
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKG--VRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 350 DQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDA 409
M+ P+ +T+N + + +K ++ E EK + EMIK P ++ I
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 410 DEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTM 469
D + A ++ ++ P + N L+ G R+ + EM R ++ VT
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 470 HKLKKAFYNESRSMRDIFDSLERRCKTSQM 499
L F+ R C +QM
Sbjct: 439 TTLIHGFFQ------------ARDCDNAQM 456
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 159/372 (42%), Gaps = 44/372 (11%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N++++ + + + ++MK S+ T +S+ + YC + +AV D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G D + +L+ + N+ S A+ ++R V++ P+ ++ +++ G K G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 232 NVEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+++ A +M + E N V+ Y T + +L + + D+AL M+ + P +
Sbjct: 240 DIDLAFNLLNKMEAAKIEAN---VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 291 FFS----------------------------------NAL-DILVKLNDSTHAVQLWDIM 315
+S NAL D VK A +L+D M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 316 VGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 375
+ + P++ Y+++I C +D +D F+ M+ FP+ +TYN + K K
Sbjct: 357 IKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 376 RVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASAN 435
R+ E + F EM + + T I A + + A ++ ++ +G+ P + N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 436 ELLVGLRNLGRL 447
LL GL G+L
Sbjct: 475 TLLDGLCKNGKL 486
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 127/289 (43%), Gaps = 22/289 (7%)
Query: 90 LSYDSPSSAV-DFFRWAGRGQRLSPY----------AWNLMVDVLGKNGRF---EQMWNA 135
++Y S S + ++ RW+ + LS +N ++D K G+ E++++
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD- 354
Query: 136 VRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
++K + T++S+ + +C + DEA F++M +VV N+L++ C+
Sbjct: 355 -EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 196 ENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVL 255
+ F ++ + + ++ L+ G+ + + + A F +MV + +++
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS--DGVHPNIM 471
Query: 256 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM 315
Y T L L + ++++A+ ++ PT+ ++ ++ + K WD+
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG---WDLF 528
Query: 316 VGIGF-NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLT 363
+ + P++I+YN +I C + F +M G PDS T
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 200/450 (44%), Gaps = 18/450 (4%)
Query: 49 ISSSARIICEILAHASSD--DIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAG 106
+S I +++ SD ++ + L + P+ +LV E+L + +A FF WAG
Sbjct: 93 VSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAG 152
Query: 107 RGQRL--SPYAWNLMVDVLGKNGRFEQMWNAVRVMKE--DGVLSLPTFASIFDSYCGAGK 162
+ Q S ++ M+ +LGK +F+ W + M++ +++ T + YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRA-LEFLNRVKKIVDPDGDSFA 221
+A+ +F +E + SLLSA+CR +N + L F N+ K D SF
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD--AKSFN 270
Query: 222 ILLEGWEKE-GNVEEANKTFGEMVERFEWNPEH-VLAYETFLITLIRGKQVDEALKFLRV 279
I+L GW G+ EA + + EM +H V++Y + + +G +++ LK
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEM---GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNN 339
MK E P K ++ + L K + + A L M + PN++ YN++I LC
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK-GIEPNVVTYNSLIKPLCKA 386
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNC 399
+ + FD+M+ G FP TY+ L + V E+ +M K +PT
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL---LAKMRKMGCEPTVETY 443
Query: 400 ATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 459
I L + + + +W+ + E + P +S ++ GL G++ + + +EM +
Sbjct: 444 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 503
Query: 460 RRILIYEVTMHKLKKAFYNESRSMRDIFDS 489
+ + E ++ F + + + I DS
Sbjct: 504 KGMRPNENVEDMIQSWFSGKQYAEQRITDS 533
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 11/359 (3%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMK----EDGVLSLPTFASIFDSYC 158
R +G + + ++V+ L K G + +N + M+ E GVL + +I D C
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL---IYNTIIDGLC 267
Query: 159 GAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGD 218
D+A+ F M G+ +VV +SL+S +C + + + +++ ++PD
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
+F+ L++ + KEG + EA K + EMV+R +P ++ Y + + ++DEA +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPS-IVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCN 338
M ++CFP + ++ + K ++++ M G L+ N + YN +I L
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG--LVGNTVTYNILIQGLFQ 443
Query: 339 NDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 398
D D F +MV G P+ +TYN + + L KN ++ + F + +++ +PT
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 399 CATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
I + A + E +++ + G+ P + N ++ G G + +EM
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 42/371 (11%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y ++++++ + + + ++MK ++ T +S+ + YC + + EAV D
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M + G + + V N+L+ + N+ S A+ ++R V K PD ++ +++ G K G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-------- 283
+ + A +M E+ + P VL Y T + L + K +D+AL + M+ +
Sbjct: 236 DTDLAFNLLNKM-EQGKLEP-GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 284 -----NCF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMV 316
+C P + FS +D VK A +L+D MV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 317 GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKR 376
+ P+++ Y+++I C +D +D + F+ MV FPD +TYN + + K KR
Sbjct: 354 KRSID--PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 377 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 436
V E + F EM + + I L A + ++A EI+ ++ +G+ P + N
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 437 LLVGLRNLGRL 447
LL GL G+L
Sbjct: 472 LLDGLCKNGKL 482
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 153/352 (43%), Gaps = 10/352 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ + + L++ CR+ +Q AL
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR-SQLPLALAV 138
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEM-VERFEWNPEHVLAYETFLIT 263
L ++ K+ +P+ + + LL G+ + EA +M V ++ N + + T +
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN---TVTFNTLIHG 195
Query: 264 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLM 323
L + EA+ + M + C P L + ++ L K D+ A L + M L
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLE 253
Query: 324 PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKF 383
P +++YN +I LC +D+ F +M G P+ +TY+ + CL R + +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 384 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRN 443
+MI+ + P + I + + A ++++ +++ I P + + L+ G
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 444 LGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF--YNESRSMRDIFDSLERR 493
RL + ++ E M+++ VT + L K F Y ++F + +R
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 153/360 (42%), Gaps = 11/360 (3%)
Query: 92 YDSPSSAVDFFR-WAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
Y A++ F+ +G R + ++ ++ L GR+ + M E + + T
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFLN 207
F+++ D++ GK EA +D M ++ +V +SL++ C + ++ + EF+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM- 387
Query: 208 RVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
V K PD ++ L++G+ K VEE + F EM +R + + Y + L +
Sbjct: 388 -VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQA 444
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
D A + + M + P + ++ LD L K A+ +++ + + P +
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS--KMEPTIY 502
Query: 328 MYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
YN +I +C V++ + F + G PD + YN + + E + F EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 388 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
++ P T I L + E + E+ + G +AS L+ + + GRL
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 621
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 36/261 (13%)
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIG--------- 319
++D+A+ M FP++ FS L + K+N + L + M +G
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 320 ------------------------FNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
PN++ ++++ C++ + DQM
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 415
G P+++T+N + L + + E M+ QP + + L + ++A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 416 IEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKA 475
+ N + + + P N ++ GL + D +EM + I VT L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 476 FYNESR---SMRDIFDSLERR 493
N R + R + D +ER+
Sbjct: 301 LCNYGRWSDASRLLSDMIERK 321
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 166/356 (46%), Gaps = 5/356 (1%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFASIFDSYCGAG 161
R G + +N +V+ + ++G + +R M+E V + + T+++I DS C G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D A+ F M G++ VV NSL+ +C+ AL + V + + P+ +F
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+LL+ + KEG ++EAN+ + EM+ R +P +++ Y T + ++ EA L +M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITR-GISP-NIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD 341
C P + F++ + + ++++ + G L+ N + Y+ ++ C +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG--LVANAVTYSILVQGFCQSGK 418
Query: 342 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCAT 401
+ F +MV HG PD +TY ++ + L N ++ + + F ++ K++ + T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 402 AITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
I + + E A ++ + G+ P + ++ GL G LS+ +M
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 167/368 (45%), Gaps = 11/368 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y N+M++ + + ++ + +VMK TF ++ GK EAV+ D
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLEGWEKEG 231
M +G + DVV NS+++ ICR TS AL+ L ++ ++ V D +++ +++ ++G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++ A F EM + V+ Y + + L + + ++ L+ M P +
Sbjct: 243 CIDAAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
F+ LD+ VK A +L+ M+ G + PN+I YN ++ C + + D
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGIS--PNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 411
MV + PD +T+ + + KRV + K F + K + + + + +
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 412 PEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR----ILIYEV 467
++A E++ ++ +G+LP + LL GL + G+L E++ + I++Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 468 TMHKLKKA 475
+ + K
Sbjct: 479 IIEGMCKG 486
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 127/298 (42%), Gaps = 7/298 (2%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N+++DV K G+ ++ + M G+ ++ T+ ++ D YC + EA D+M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
+ D+V SL+ C + F N K+ + + +++IL++G+ + G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
+ A + F EMV P+ V+ Y L L ++++AL+ ++ + ++
Sbjct: 420 KLAEELFQEMVSHGVL-PD-VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGF-NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQM 352
++ + K A W++ + + PN++ Y +I LC + +M
Sbjct: 478 TIIEGMCKGGKVEDA---WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 353 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDAD 410
G P+ TYN + +++ + K EM + + I MLL +
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGE 592
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 129/332 (38%), Gaps = 41/332 (12%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
SL F+ F + +++ + + ++G+ ++ +N +++ CR +T A
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRC-CKTCFAYSV 145
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L +V K+ +PD +F L++G EG V EA MVE P+ V+ Y + + +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPD-VVTYNSIVNGI 203
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
R AL LR M+ N +
Sbjct: 204 CRSGDTSLALDLLRKMEERN-------------------------------------VKA 226
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++ Y+ +I LC + +D F +M G +TYN + L K + ++
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
+M+ E P + + + + + + A E++ ++ GI P + N L+ G
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 476
RLS+ + M+ + VT L K +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 9/287 (3%)
Query: 117 NLMVDVLGKNGRFEQMWNAVRV---MKE-DGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
++++ + GR + ++++RV MK+ D S + ++ + + A +
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLEGWEKEG 231
M G+ V ++N L+ A+CR + L+ FL K+ DPD ++ L+ G + G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++EA K F EMVE+ + P V+ Y + + L K VDEA+++L MK + P +
Sbjct: 207 RIDEAKKLFTEMVEK-DCAPT-VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
+S+ +D L K S A++L+++M+ G PN++ Y +I LC + D+
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 398
M G PD+ Y + + E F EMI P L
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 252 EHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCFPTLKFFSNALDILVKLNDSTH 307
E+ + E L+++ RG +V LRV MK +C P+ K + L ILV+ N
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 308 AVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD-VDNVFRFFDQMVFHGAFPDSLTYNM 366
A + + M IG L P + N +I LC ND VD + F +M G PDS TY
Sbjct: 140 AFKFYKNMREIG--LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 367 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 426
+ L + R+ E +K F EM++ + PT + + I L + + A+ + G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 427 ILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
I P + + L+ GL GR E M+ R VT L E +
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 10/293 (3%)
Query: 171 DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI----VDPDGDSFAILLEG 226
D++ +E VV+ + LLS ICR + R + L K+ DP ++ +L
Sbjct: 72 DLIVRMKIENCVVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAI 130
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG-KQVDEALKFLRVMKGENC 285
+E + A K + M E P V + + L R VD LK M C
Sbjct: 131 LVEENQLNLAFKFYKNMREI--GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC 188
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
P + + L + A +L+ MV + P ++ Y ++I LC + +VD
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--DCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
R+ ++M G P+ TY+ + + L K+ R + + F M+ +P + T IT
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 406 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 458
L + + A+E+ + + G+ P +++ G + + + F +EM+
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 14/255 (5%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T+ ++ C G+ DEA F M VV SL++ +C +N A+ +L
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMRYLEE 252
Query: 209 VK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
+K K ++P+ +++ L++G K+G +A + F M+ R P +++ Y T + L +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRP-NMVTYTTLITGLCKE 310
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
+++ EA++ L M + P + + ++ A D M+ G + PN +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG--ITPNRL 368
Query: 328 MY-------NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEV 380
+ N V+ LC N F + M G + T + +CL K +
Sbjct: 369 TWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKA 427
Query: 381 EKFFHEMIKNEWQPT 395
+ E++ + P+
Sbjct: 428 VQLVDEIVTDGCIPS 442
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 43/348 (12%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL----------------------------- 145
+ ++VD L K G F + ++ + VM++ G+L
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 146 -------SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQ 198
+ T+ D Y +G A+ +F+ M G+ ++VA N+ L ++ + +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA-GR 483
Query: 199 TSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAY 257
A + +K I + PD ++ ++++ + K G ++EA K EM+E P+ V+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEPD-VIVV 541
Query: 258 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVG 317
+ + TL + +VDEA K MK PT+ ++ L L K A++L++ MV
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 318 IGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRV 377
G PN I +N + LC ND+V + +M+ G PD TYN I L+KN +V
Sbjct: 602 KG--CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 378 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 425
E FFH+M K + P + T + ++ A E A +I L N
Sbjct: 660 KEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 7/355 (1%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + + Y + + + VLG+ G+ + + ++ M ++G + T+ + D+ C A K D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD-PDGDSFAILLE 225
F+ M + D V +LL + S +F + ++K PD +F IL++
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS-VKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K GN EA T M ++ H Y T + L+R ++D+AL+ M+
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLH--TYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
PT + +D K DS A++ ++ M G + PN++ NA + L
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG--IAPNIVACNASLYSLAKAGRDREA 487
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
+ F + G PDS+TYNM+ +C K + E K EM++N +P + + I
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 406 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
L AD + A +++ + E + P + N LL GL G++ + E M+ +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 18/372 (4%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMS---- 169
+N ++ LGKNG+ ++ M + G + TF ++FD C K DE ++
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC---KNDEVTLALKML 631
Query: 170 FDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEK 229
F +M M G DV N+++ + + Q A+ F +++KK+V PD + LL G K
Sbjct: 632 FKMMDM-GCVPDVFTYNTIIFGLVKN-GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVK 689
Query: 230 EGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGENCFPT 288
+E+A K + P + L +E + +++ +D A+ F R++ C
Sbjct: 690 ASLIEDAYKIITNFLYNCADQPAN-LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 289 LKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRF 348
+ K N+ + A L++ + P L YN +IG L D ++
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTK-DLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 349 FDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 408
F Q+ G PD TYN + + K+ ++ E+ + + EM +E + + I+ L+
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 409 ADEPEIAIEI-WNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR----RIL 463
A + A+++ ++ + + P + L+ GL GRL + ++ E ML+
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 464 IYEVTMHKLKKA 475
IY + ++ KA
Sbjct: 928 IYNILINGFGKA 939
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 164/395 (41%), Gaps = 17/395 (4%)
Query: 55 IICEILAHASSDDIES---ALACTGIIPTPD-LVHEVLQLS--YDSPSSAVDFFRWAGRG 108
+I ILA A D+ S L GI D ++ +++ S +++ S A F +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 109 QRLSPY--AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
+ P +NL++ L + E + +K G + + T+ + D+Y +GK DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD--PDGDSFAIL 223
+ MS H E + + N ++S + + N AL+ + D P ++ L
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGN-VDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 224 LEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 283
++G K G + EA + F M++ + P + Y + + + D A + M E
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLD-YGCRPNCAI-YNILINGFGKAGEADAACALFKRMVKE 955
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVD 343
P LK +S +D L + + + + G N P+++ YN +I L + ++
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN--PDVVCYNLIINGLGKSHRLE 1013
Query: 344 NVFRFFDQM-VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 402
F++M G PD TYN + L V E K ++E+ + +P
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 403 ITMLLDADEPEIAIEIWNYILENGILPLEASANEL 437
I + +PE A ++ ++ G P + +L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 8/246 (3%)
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEA 273
PD ++ LL+ + K G ++E + + EM E N + + + L++ VD+A
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN---TITHNIVISGLVKAGNVDDA 874
Query: 274 LK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAV 332
L + +M + PT + +D L K A QL++ M+ G PN +YN +
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR--PNCAIYNIL 932
Query: 333 IGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 392
I + D F +MV G PD TY+++ +CL RV E +F E+ ++
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 393 QPTPLNCATAITMLLDADEPEIAIEIWNYI-LENGILPLEASANELLVGLRNLGRLSDVR 451
P + I L + E A+ ++N + GI P + N L++ L G + +
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 452 RFAEEM 457
+ E+
Sbjct: 1053 KIYNEI 1058
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 15/357 (4%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRF--EQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGK--- 162
G L+ Y++N ++ +L K+ RF E M R++ E SL T++S+ G GK
Sbjct: 183 GFVLNAYSYNGLIHLLLKS-RFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGLGKRRD 238
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFA 221
D + M G++ +V + + R + + A E L R+ + PD ++
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA-GKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+L++ ++ A + F E ++ P+ V Y T L + +D +F M+
Sbjct: 298 VLIDALCTARKLDCAKEVF-EKMKTGRHKPDRV-TYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD 341
+ P + F+ +D L K + A D+M G ++PNL YN +I L
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG--ILPNLHTYNTLICGLLRVHR 413
Query: 342 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCAT 401
+D+ F M G P + TY + + K+ + F +M P + C
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 402 AITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 458
++ L A A +I+ + + G++P + N ++ +G + + + EM+
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 160/429 (37%), Gaps = 52/429 (12%)
Query: 91 SYDSPSSAVDFFRWAGRGQRL--SPYAWNLMVDVLGKNGRFEQMWNAV-----RVMKEDG 143
S+ S+ +F+ L + N M++ L +G+ E+M R++K D
Sbjct: 94 SFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD- 152
Query: 144 VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRAL 203
T+ +IF S G +A + M G + + N L+ + + T A+
Sbjct: 153 ---TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT-EAM 208
Query: 204 EFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLI 262
E R + + P +++ L+ G K +++ EM E P +V + +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKP-NVYTFTICIR 266
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV-------------KLNDSTH-- 307
L R +++EA + L+ M E C P + ++ +D L K+ H
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 308 --------------------AVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFR 347
Q W M G +P+++ + ++ LC + F
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH--VPDVVTFTILVDALCKAGNFGEAFD 384
Query: 348 FFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLL 407
D M G P+ TYN + L++ R+ + + F M +PT I
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 408 DADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEV 467
+ + A+E + + GI P + N L L GR + ++ + + ++ V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 468 TMHKLKKAF 476
T + + K +
Sbjct: 505 TYNMMMKCY 513
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 13/304 (4%)
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICR---QENQTSRALEFLNRVKK--IVDPDGD 218
D AV + + +G+ +D +S+L I R + N S A + K V P
Sbjct: 730 DNAVSFSERLVANGICRDG---DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++ +L+ G + +E A F + V+ P+ V Y L + ++DE + +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQ-VKSTGCIPD-VATYNFLLDAYGKSGKIDELFELYK 844
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLW-DIMVGIGFNLMPNLIMYNAVIGLLC 337
M C + + LVK + A+ L+ D+M F+ P Y +I L
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS--PTACTYGPLIDGLS 902
Query: 338 NNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPL 397
+ + + F+ M+ +G P+ YN++ K F M+K +P
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 398 NCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
+ + L + + + + E+G+ P N ++ GL RL + EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 458 LNRR 461
R
Sbjct: 1023 KTSR 1026
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 192/443 (43%), Gaps = 69/443 (15%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++N++++ L + GR +++ + M G L T+ ++ YC G + +A++ M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
HG+ V+ SL+ ++C+ N +RA+EFL++++ + + P+ ++ L++G+ ++G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 233 VEEANKTFGEM----------------------------------VERFEWNPEHVLAYE 258
+ EA + EM ++ +P+ V++Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD-VVSYS 454
Query: 259 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGI 318
T L R VDEAL+ R M + P +S+ + + + A L++ M+ +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 319 GFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVH 378
G L P+ Y A+I C D++ + ++MV G PD +TY+++ L K R
Sbjct: 515 G--LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 379 EVEKFFHEMIKNEWQPTPLNCATAI---------------------TMLLDADEPEIAIE 417
E ++ ++ E P+ + T I M+ +AD +
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD------Q 626
Query: 418 IWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFY 477
++ +L P + N ++ G G + +EM+ L++ VT+ L KA +
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 478 NESR--SMRDIFDSLERRCKTSQ 498
E + + + + R C+ S+
Sbjct: 687 KEGKVNELNSVIVHVLRSCELSE 709
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 179/403 (44%), Gaps = 46/403 (11%)
Query: 110 RLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
++SP + +N+++ G + M+ G L ++ T+ ++ D YC K D+
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFLNRVKKIVDPDGDSFAILL 224
M++ G+E ++++ N +++ +CR+ + S L +NR + D ++ L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR--RGYSLDEVTYNTLI 317
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
+G+ KEGN +A EM+ R P V+ Y + + ++ + ++ A++FL M+
Sbjct: 318 KGYCKEGNFHQALVMHAEML-RHGLTPS-VITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 285 CFPTLKFFSNALD-------------ILVKLNDSTH----------------------AV 309
P + ++ +D +L ++ND+ A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 310 QLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 369
+ + M G L P+++ Y+ V+ C + DVD R +MV G PD++TY+ + +
Sbjct: 436 AVLEDMKEKG--LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 370 CLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILP 429
+ +R E + EM++ P I + E A+++ N ++E G+LP
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 430 LEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKL 472
+ + L+ GL R + +R ++ + +VT H L
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 187/470 (39%), Gaps = 60/470 (12%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQ-----------------RLSPYAWNLMVDV 122
TP+ +L S + + + F WA Q +L A L DV
Sbjct: 47 TPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDV 106
Query: 123 LGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFD----SYCGAGKYDEAVMSFDVMSMHGV 178
K E + ++E L T +S+FD SY D+A+ + HG
Sbjct: 107 AAKTLDDEYASLVFKSLQETYDLCYST-SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 179 EQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLEGWEKEGNVEEAN 237
V++ N++L A R + S A F ++ V P+ ++ IL+ G+ GN++ A
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 238 KTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD 297
F +M E P +V+ Y T + + +++D+ K LR M + P L ++ ++
Sbjct: 226 TLFDKM-ETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 298 -------------ILVKLNDSTHAVQ--LWDIMVG------------------IGFNLMP 324
+L ++N +++ ++ ++ + L P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++I Y ++I +C +++ F DQM G P+ TY + + + ++E +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
EM N + P+ + I + E AI + + E G+ P S + +L G
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSMR--DIFDSLER 492
+ + R EM+ + I +T L + F + R+ D+++ + R
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 168/409 (41%), Gaps = 45/409 (11%)
Query: 107 RGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKY 163
R + SP +N+M+ L G+ + + + D ++ T+ + ++ G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAI 222
DEA+ D M G++ D+ N+++ +C+ E RA E + ++ K +PD S+ I
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCK-EGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
LL +G EE K +M E +V+ Y + TL R +++EA+ L++MK
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFS--EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDV 342
+ P + + + A++ + M+ G +P+++ YN V+ LC N
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG--CLPDIVNYNTVLATLCKNGKA 419
Query: 343 DNVFRFFD-----------------------------------QMVFHGAFPDSLTYNMI 367
D F +M+ +G PD +TYN +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 368 FECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGI 427
CL + V E + +M E+ P+ + + A E AI + ++ NG
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 428 LPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 476
P E + L+ G+ G ++ A +++ R I E + +L + F
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLV-RIDAISEYSFKRLHRTF 587
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 5/307 (1%)
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI 212
IF C +G Y E++ + M G DV+ L+ N +A+ + ++K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKF 153
Query: 213 VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDE 272
PD ++ L+ G+ K +++A + M + +++P+ V Y + +L ++D
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTV-TYNIMIGSLCSRGKLDL 211
Query: 273 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAV 332
ALK L + +NC PT+ ++ ++ + A++L D M+ G L P++ YN +
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKPDMFTYNTI 269
Query: 333 IGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 392
I +C VD F + G PD ++YN++ L+ + E EK +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 393 QPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRR 452
P + + IT L + E A+ + + E G+ P S + L+ GRL
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 453 FAEEMLN 459
F E M++
Sbjct: 390 FLETMIS 396
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 9/350 (2%)
Query: 135 AVRVMK---EDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSA 191
AVRVM+ + G + + ++ + +C + D+A D M D V N ++ +
Sbjct: 143 AVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 192 ICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWN 250
+C + + AL+ LN+ + P ++ IL+E EG V+EA K EM+ R
Sbjct: 203 LCSR-GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLK 260
Query: 251 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQ 310
P+ + Y T + + + VD A + +R ++ + C P + ++ L L+ +
Sbjct: 261 PD-MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 311 LWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 370
L M + PN++ Y+ +I LC + ++ M G PD+ +Y+ +
Sbjct: 320 LMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 371 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPL 430
+ R+ +F MI + P +N T + L + + A+EI+ + E G P
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 431 EASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 480
+S N + L + G EM++ I E+T + + E
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 17/239 (7%)
Query: 229 KEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK--G 282
+ GN E+ MV R +NP+ +L + LI+G + + +A++ + +++ G
Sbjct: 101 RSGNYIESLHLLETMV-RKGYNPDVILCTK-----LIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDV 342
+ P + ++ ++ K+N A ++ D M F+ P+ + YN +IG LC+ +
Sbjct: 155 Q---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKL 209
Query: 343 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 402
D + +Q++ P +TY ++ E + V E K EM+ +P T
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 403 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR 461
I + + A E+ + G P S N LL L N G+ + + +M + +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 159/352 (45%), Gaps = 5/352 (1%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDE 165
RG + + +V+ L K G + + ++ M++ + + + +I D C D+
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
A+ F M G+ DV +SL+S +C + + + +++ ++P+ +F+ L++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
+ KEG + EA K + EM++R +P+ + Y + + ++DEA +M ++C
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
FP + +S + K ++L+ M G L+ N + Y +I D DN
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNA 452
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
F QMV G P+ LTYN++ + L KN ++ + F + ++ +P I
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 406 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 457
+ A + E E++ + G+ P + N ++ G G + ++M
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 6/301 (1%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF ++ K EAV D M G + D+V ++++ +C++ AL L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR-GDIDLALSLLKK 248
Query: 209 VKK-IVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
++K ++ D + +++G K ++++A F EM + P+ V Y + + L
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPD-VFTYSSLISCLCNY 306
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
+ +A + L M P + FS +D VK A +L+D M+ + P++
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF 364
Query: 328 MYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
Y+++I C +D +D F+ M+ FP+ +TY+ + + K KRV E + F EM
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 388 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
+ + T I A + + A ++ ++ G+ P + N LL GL G+L
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 448 S 448
+
Sbjct: 485 A 485
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 143/337 (42%), Gaps = 6/337 (1%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + K++ + + M G+ D+ + ++ CR+ +Q S AL
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR-SQLSLALAV 140
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + + LL G+ + +A +MVE + P+ + T + L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPD-TFTFTTLIHGL 198
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ EA+ + M C P L + ++ L K D A+ L M +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK--GKIEA 256
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++++YN +I LC +D+ F +M G PD TY+ + CL R + +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
+MI+ + P + + I + + A ++++ +++ I P + + L+ G
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
RL + + E M+++ VT L K F R
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 144/348 (41%), Gaps = 6/348 (1%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCG 159
F +G R + ++ ++ L GR+ + M E + ++ TF+++ D++
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
GK EA +D M ++ D+ +SL++ C + F + K P+ +
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
++ L++G+ K VEE + F EM +R + + Y T + + + D A +
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNN 339
M P + ++ LD L K A+ +++ + + P++ YN +I +C
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS--TMEPDIYTYNIMIEGMCKA 516
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNC 399
V++ + F + G P+ + YN + + E + +M ++ P
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 400 ATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
T I L + E + E+ + G +AS L+ + + GRL
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 623
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 109/295 (36%), Gaps = 70/295 (23%)
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM--VGIGFNLM--- 323
+VD+A+ M FP++ F+ L + K+N + L + M +GI +L
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 324 ----------------------------PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
P+++ ++++ C++ + + DQMV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 415
G PD+ T+ + L + + E +M++ QP + T + L + ++A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 416 IE---------------IWNYILEN--------------------GILPLEASANELLVG 440
+ I+N I++ GI P + + L+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 441 LRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERR 493
L N GR SD R +M+ R+I VT L AF E + ++D + +R
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMV 353
N L ++K++D AV L+ MV P+++ +N ++ + + + V +QM
Sbjct: 56 NRLSDIIKVDD---AVDLFGDMVKS--RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 354 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 413
G D TY++ C + ++ +M+K ++P + ++ + +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 414 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
A+ + + ++E G P + L+ GL + S+ ++M+ R
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 19/376 (5%)
Query: 68 IESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWA--GRGQRLSPYAWNLMVDVLGK 125
+ESAL TGI P+ +LVH + SP F+WA G LSP ++ +V+ L K
Sbjct: 88 LESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCK 147
Query: 126 NGRFEQMWNAV--RVMKEDG--VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMH----G 177
FE W+ V RV ++G ++S TF + Y AG +A+ +F+ +
Sbjct: 148 AREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCK 207
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD----PDGDSFAILLEGWEKEGNV 233
++ + LL A+C+ E A +L R+ +D P F ILL GW + +
Sbjct: 208 SATELRLLEVLLDALCK-EGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKL 266
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
++A K + EM + P V+ Y T + R ++V A++ L MK F+
Sbjct: 267 KQAEKLWEEM-KAMNVKPT-VVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMV 353
+D L + + A+ + + P ++ YN+++ C D+ + M+
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESG--PTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 354 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 413
G P + TYN F+ K+ + E + ++I+ P L + ML + +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 414 IAIEIWNYILENGILP 429
+A+++ + GI P
Sbjct: 443 LAMQVNKEMKNRGIDP 458
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 179/381 (46%), Gaps = 17/381 (4%)
Query: 76 GIIPTPDLVHEVLQ--LSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQM 132
G +P + ++V+ +D + A R RG + +++ L K GR +
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 133 WNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEA--VMSFDVMSMHGVEQDVVAVNSLL 189
+ R+ K + V+ F ++ + G+ D+A V+S D+++ +G+ DV NSL+
Sbjct: 342 KDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLS-DMVTSYGIVPDVCTYNSLI 396
Query: 190 SAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFE 248
+ E ALE L+ ++ K P+ S+ IL++G+ K G ++EA EM +
Sbjct: 397 YGYWK-EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA--D 453
Query: 249 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHA 308
+ + + + + ++ EA++ R M + C P + F++ + L ++++ HA
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 309 VQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIF 368
+ L M+ G ++ N + YN +I ++ + ++MVF G+ D +TYN +
Sbjct: 514 LWLLRDMISEG--VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 369 ECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGIL 428
+ L + V + F +M+++ P+ ++C I L + E A+E ++ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 429 PLEASANELLVGLRNLGRLSD 449
P + N L+ GL GR+ D
Sbjct: 632 PDIVTFNSLINGLCRAGRIED 652
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 139/290 (47%), Gaps = 7/290 (2%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
+G + + Y++ ++VD K G+ ++ +N + M DG+ + F + ++C + E
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL-NRVKKIVDPDGDSFAILL 224
AV F M G + DV NSL+S +C + ++ AL L + + + V + ++ L+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
+ + G ++EA K EMV F+ +P + Y + + L R +VD+A M +
Sbjct: 537 NAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDN 344
P+ + ++ L + AV+ MV G P+++ +N++I LC +++
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST--PDIVTFNSLINGLCRAGRIED 652
Query: 345 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 394
F ++ G PD++T+N + L K V++ E I++ + P
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 185/425 (43%), Gaps = 19/425 (4%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAG--RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVR 137
TP ++++L+L + S++++ F W G G R S + +++ LG NG F+ + +
Sbjct: 77 TPFQLYKLLELPLNV-STSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 138 VMKEDG-VLSLPTFASIFDSYCGAGKYDEAV-MSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
MK++G V F SI Y AG + + ++ +++ E + N +L +
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195
Query: 196 ENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVL 255
A F + + + + P +F ++++ + ++ A +M + P V+
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT-KHGCVPNSVI 254
Query: 256 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM 315
Y+T + +L + +V+EAL+ L M C P + F++ + L K + A ++ + M
Sbjct: 255 -YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 316 VGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 375
+ GF P+ I Y ++ LC VD F ++ P+ + +N + + +
Sbjct: 314 LIRGF--APDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHG 367
Query: 376 RVHEVEKFFHEMIKNEWQPTPLNCA--TAITMLLDADEPEIAIEIWNYILENGILPLEAS 433
R+ + + +M+ + + P C + I +A+E+ + + G P S
Sbjct: 368 RLDDAKAVLSDMVTS-YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 434 ANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLE 491
L+ G LG++ + EM + V + L AF E R +IF +
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 492 RR-CK 495
R+ CK
Sbjct: 487 RKGCK 491
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 159/380 (41%), Gaps = 36/380 (9%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
+L TF + ++C + D A+ M+ HG + V +L+ ++ + N+ + AL+
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC-NRVNEALQL 274
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L + + PD ++F ++ G K + EA K M+ R + P+ + Y + L
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDI-TYGYLMNGL 332
Query: 265 IRGKQVDEALK-FLRVMKGE--------NCFPTLKFFSNALDILVKLNDSTHAV------ 309
+ +VD A F R+ K E + F T +A +L + S V
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 310 -----QLW-DIMVGIGFNLM---------PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVF 354
W + +VG+ ++ PN+ Y ++ C +D + ++M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 355 HGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEI 414
G P+++ +N + K R+ E + F EM + +P + I+ L + DE +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 415 AIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKK 474
A+ + ++ G++ + N L+ G + + R+ EM+ + + E+T + L K
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 475 AF--YNESRSMRDIFDSLER 492
E R +F+ + R
Sbjct: 573 GLCRAGEVDKARSLFEKMLR 592
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 167/365 (45%), Gaps = 8/365 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
LVH + Q ++ S AV R +G + + +++ L K G + N + M++
Sbjct: 176 LVHGLFQ--HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 142 DGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + ++++ DS C D+A+ F M G+ DV +SL+S +C +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + +++ ++P+ +F L++ + KEG + EA K F EM++R +P +++ Y +
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDP-NIVTYNSL 351
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGF 320
+ ++DEA + +M ++C P + ++ ++ K ++L+ M G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG- 410
Query: 321 NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEV 380
L+ N + Y +I D DN F QMV G P+ +TYN + + L KN ++ +
Sbjct: 411 -LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 381 EKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVG 440
F + K++ +P + A + E +++ + G+ P + N ++ G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 441 LRNLG 445
G
Sbjct: 530 FCKKG 534
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 157/371 (42%), Gaps = 42/371 (11%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N+M++ L + + + ++MK S+ T S+ + +C + EAV D
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G + D V +L+ + Q N+ S A+ + R V K PD ++ ++ G K G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGL-FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-------- 283
+ A +M E+ + + V+ Y T + +L + + VD+AL M +
Sbjct: 220 EPDLALNLLNKM-EKGKIEAD-VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 284 -----NCF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMV 316
+C P + F++ +D K A +L+D M+
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 317 GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKR 376
+ PN++ YN++I C +D +D + F MV PD +TYN + K K+
Sbjct: 338 QRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 377 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 436
V + + F +M + + T I A + + A ++ ++ +G+ P + N
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 437 LLVGLRNLGRL 447
LL GL G+L
Sbjct: 456 LLDGLCKNGKL 466
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 8/351 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M + GV ++ N +++ +CR+ +Q S AL
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRR-SQLSFALAI 122
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ P + LL G+ + EA +MVE + P+ V + T + L
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTV-TFTTLVHGL 180
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ + EA+ + M + C P L + ++ L K + A+ L + M +
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME--KGKIEA 238
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++++Y+ VI LC VD+ F +M G PD TY+ + CL R + +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
+M++ + P + + I + A ++++ +++ I P + N L+ G
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSM--RDIFDSLERR 493
RL + ++ M+++ L VT + L F + + ++F + RR
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 128/307 (41%), Gaps = 23/307 (7%)
Query: 96 SSAVDFFRWAGRGQRLSPY----------AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV- 144
S ++ RW+ + LS +N ++D K G+ + M + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 145 LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE 204
++ T+ S+ + +C + DEA F +M DVV N+L++ C+ +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 205 FLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
F + ++ + + ++ L+ G+ + + + A F +MV + +++ Y T L L
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS--DGVHPNIMTYNTLLDGL 460
Query: 265 IRGKQVDEAL---KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGF- 320
+ ++++A+ ++L+ K E T S + K+ D WD+ +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG------WDLFCSLSLK 514
Query: 321 NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEV 380
+ P++I YN +I C + + F +M G PDS TYN + +++
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 381 EKFFHEM 387
+ EM
Sbjct: 575 AELIKEM 581
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 159/340 (46%), Gaps = 6/340 (1%)
Query: 92 YDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
++ S AV R RG + + + +V+ L K G + + ++ M++ + +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ +I D+ C ++A+ F M G+ +VV NSL+ +C + + + +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
++ ++P+ +F+ L++ + KEG + EA K + EM++R +P+ + Y + + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDR 375
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
+DEA +M ++CFP + ++ + K ++L+ M G L+ N + Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTY 433
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
N +I L D D + F +MV G PD +TY+++ + L K ++ + F + K
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILP 429
++ +P I + A + E +++ + G+ P
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 161/371 (43%), Gaps = 42/371 (11%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y++N++++ + + + ++MK + T +S+ + YC + EAV D
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M + + + V N+L+ + N+ S A+ ++R V + PD ++ ++ G K G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN------- 284
+++ A +M E+ + + V+ Y T + L K V++AL M +
Sbjct: 235 DIDLALSLLKKM-EKGKIEAD-VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 285 ------CF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMV 316
C P + FS +D VK A +L+D M+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 317 GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKR 376
+ P++ Y+++I C +D +D F+ M+ FP+ +TYN + + K KR
Sbjct: 353 KRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 377 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 436
V E + F EM + + T I L A + ++A +I+ ++ +G+ P + +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 437 LLVGLRNLGRL 447
LL GL G+L
Sbjct: 471 LLDGLCKYGKL 481
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 164/384 (42%), Gaps = 8/384 (2%)
Query: 98 AVDFFRWAGRGQRL-SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFD 155
AVD F + + L S +N ++ + K +F+ + + M+ + L ++ + +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VD 214
+C + A+ M G E D+V ++SLL+ C + + S A+ ++++ +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK-RISEAVALVDQMFVMEYQ 182
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
P+ +F L+ G EA MV R P+ + Y T + L + +D AL
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPD-LFTYGTVVNGLCKRGDIDLAL 240
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIG 334
L+ M+ + ++ +D L + A+ L+ M G + PN++ YN++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIR 298
Query: 335 LLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 394
LCN + R M+ P+ +T++ + + +K ++ E EK + EMIK P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 395 TPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFA 454
++ I D + A ++ ++ P + N L+ G R+ +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 455 EEMLNRRILIYEVTMHKLKKAFYN 478
EM R ++ VT + L + +
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 145/337 (43%), Gaps = 6/337 (1%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + K+D + + M + D+ + N L++ CR+ +Q AL
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRR-SQLPLALAV 137
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + + LL G+ + EA +M E+ P V + T + L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV-MEYQPNTV-TFNTLIHGL 195
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ EA+ + M C P L + ++ L K D A+ L M +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK--GKIEA 253
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++++Y +I LCN +V++ F +M G P+ +TYN + CL R + +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
+MI+ + P + + I + + A ++++ +++ I P + + L+ G
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
RL + + E M+++ VT + L K F R
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 136/354 (38%), Gaps = 37/354 (10%)
Query: 91 SYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLP 148
+Y + + A++ F +G R + +N ++ L GR+ + M E + ++
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF+++ D++ GK EA +D M ++ D+ +SL++ C + F
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
+ K P+ ++ L++G+ K VEE + F EM +R + + Y T + L +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG--NTVTYNTLIQGLFQAG 444
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQL----------------- 311
D A K + M + P + +S LD L K A+ +
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 312 ---------------WDIMVGIGF-NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
WD+ + + PN+I+Y +I C + F +M
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDA 409
G P+S TYN + +++ + EM + + I ML D
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 45/336 (13%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSF 220
K D+AV F M +V N LLSAI + N+ + R++ + + D S+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM-NKFDLVISLGERMQNLRISYDLYSY 118
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
IL+ + + + A G+M+ + + P+ ++ + L GK++ EA
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMM-KLGYEPD-IVTLSSLLNGYCHGKRISEA------- 169
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVI-GLLCNN 339
V L D M + + PN + +N +I GL +N
Sbjct: 170 ----------------------------VALVDQMFVMEYQ--PNTVTFNTLIHGLFLHN 199
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNC 399
+ V D+MV G PD TY + L K + +M K + + +
Sbjct: 200 KASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 400 ATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 459
T I L + A+ ++ + GI P + N L+ L N GR SD R +M+
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 460 RRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERR 493
R+I VT L AF E + ++D + +R
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 173/408 (42%), Gaps = 46/408 (11%)
Query: 106 GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYD 164
G G ++ +++ K G ++ ++ M + G+L + T+ SI + C A D
Sbjct: 189 GGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD 248
Query: 165 EAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK-IVDPDGDSFAIL 223
+A+ + M +GV D + NS+L C Q A+ FL +++ V+PD ++++L
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYC-SSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 224 LEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 283
++ K G EA K F M +R PE + Y T L + E L +M
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKR-GLKPE-ITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVD 343
P FS + K A+ ++ M G N PN + Y AVIG+LC + V+
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVE 423
Query: 344 NVFRFFDQMVFHGAFPDSLTYN-----------------MIFE------CL--------- 371
+ +F+QM+ G P ++ YN +I E CL
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 372 ---IKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGIL 428
K RV E EK F M++ +P + T I A + + A+++ + ++ G+
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 429 PLEASANELLVGLRNLGRLSDVRRFAEEM----LNRRILIYEVTMHKL 472
P + + L+ G + R+ D +EM ++ I+ Y + + L
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 171/392 (43%), Gaps = 12/392 (3%)
Query: 56 ICEILAHASSDDIESALACTGIIPTPDLVHEVLQ--LSYDSPSSAVDFFRWAGRGQRLSP 113
+C+ A + ++ + + G++P + +L S P A+ F + R + P
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEP 299
Query: 114 --YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSF 170
++L++D L KNGR + M + G+ + T+ ++ Y G E
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 171 DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKE 230
D+M +G+ D + L+ A +Q L F ++ ++P+ ++ ++ K
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTL 289
G VE+A F +M++ +P +++ Y + + L + + A + L ++ C T+
Sbjct: 420 GRVEDAMLYFEQMIDE-GLSPGNIV-YNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 290 KFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFF 349
FF++ +D K + +L+++MV IG PN+I YN +I C +D +
Sbjct: 478 -FFNSIIDSHCKEGRVIESEKLFELMVRIGVK--PNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 350 DQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDA 409
MV G P+++TY+ + K R+ + F EM + P + + L
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 410 DEPEIAIEIWNYILENGILPLEASANELLVGL 441
A E++ I E+G ++ N +L GL
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 15/297 (5%)
Query: 107 RGQRLSPYAWNLMVDVLGKNG------RFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGA 160
RG+ S Y N + + ++ R+ +M R ++ L T+ + C A
Sbjct: 44 RGRGASIYGLNRALADVARDSPAAAVSRYNRM---ARAGADEVTPDLCTYGILIGCCCRA 100
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF-LNRVKKI-VDPDGD 218
G+ D + + G D +A LL +C + +TS A++ L R+ ++ P+
Sbjct: 101 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC-ADKRTSDAMDIVLRRMTELGCIPNVF 159
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFL 277
S+ ILL+G E +EA + M +R +P V++Y T + + D+A
Sbjct: 160 SYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLC 337
M P + +++ + L K A+++ + MV G +MP+ + YN+++ C
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG--VMPDCMTYNSILHGYC 277
Query: 338 NNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 394
++ F +M G PD +TY+++ + L KN R E K F M K +P
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 123/303 (40%), Gaps = 9/303 (2%)
Query: 166 AVMSFDVMSMHGVEQ---DVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAI 222
AV ++ M+ G ++ D+ L+ CR N +KK D +F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-- 280
LL+G + +A + P +V +Y L L + EAL+ L +M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIP-NVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 281 -KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNN 339
+G P + ++ ++ K DS A + M+ G ++P+++ YN++I LC
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRG--ILPDVVTYNSIIAALCKA 244
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNC 399
+D + MV +G PD +TYN I + + E F +M + +P +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 400 ATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 459
+ + L A +I++ + + G+ P + LL G G L ++ + M+
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 460 RRI 462
I
Sbjct: 365 NGI 367
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 13/314 (4%)
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI----VDPDGDS 219
++A FD + G + +N L+ + R + + A+ NR+ + V PD +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVAR--DSPAAAVSRYNRMARAGADEVTPDLCT 89
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKF-L 277
+ IL+ + G ++ G ++++ F + +A+ L L K+ +A+ L
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDA---IAFTPLLKGLCADKRTSDAMDIVL 146
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVG-IGFNLMPNLIMYNAVIGLL 336
R M C P + ++ L L N S A++L +M G P+++ Y VI
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 337 CNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTP 396
D D + + +M+ G PD +TYN I L K + + + + + M+KN P
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 397 LNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEE 456
+ + + + +P+ AI + +G+ P + + L+ L GR + R+ +
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 457 MLNRRILIYEVTMH 470
M +R L E+T +
Sbjct: 327 M-TKRGLKPEITTY 339
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 38/316 (12%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +++++ K G+ +Q M++ G+ + T+ ++ C +G+ ++A++ F+
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEF-LNRVKKIVDPDGDSFAILLEGWEKEG 231
M G+ + NSL+ +C N+ RA E L + + + + F +++ KEG
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTC-NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
V E+ K F E++ R P +V+ Y T + ++DEA+K L M P
Sbjct: 491 RVIESEKLF-ELMVRIGVKP-NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFN---LMPNLIM-------------------- 328
+S ++ K++ A+ L+ M G + + N+I+
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 329 ----------YNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVH 378
YN ++ LC N D+ + F + ++ T+N++ + L+K R
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 379 EVEKFFHEMIKNEWQP 394
E + F N P
Sbjct: 669 EAKDLFVAFSSNGLVP 684
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 176/400 (44%), Gaps = 13/400 (3%)
Query: 86 EVLQLSYDSPSSAVDFFRWAGRGQ-RLSPYAWNLMVDVLGKNGRFEQMWNAV-RVMKEDG 143
EV++ ++P S F G +L + M++ +G F+ + + R+ E+
Sbjct: 49 EVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR 108
Query: 144 VLSLPTFASIFDSYCGAGKYDEAVMSFDVM-SMHGVEQDVVAVNSLLSAICRQENQTSRA 202
V+ +F +F +Y A D+AV F M ++ V + NS+L+ I E R
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVII-NEGLYHRG 167
Query: 203 LEFLNRVKKI-----VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAY 257
LEF + V + P+G SF ++++ K V+ A + F M ER + P+ Y
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER-KCLPDG-YTY 225
Query: 258 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVG 317
T + L + +++DEA+ L M+ E C P+ ++ +D L K D T +L D M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 318 IGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRV 377
G +PN + YN +I LC +D ++MV P+ +TY + L+K +R
Sbjct: 286 KG--CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 378 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 437
+ + M + + + I+ L + E A+ +W + E G P + L
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 438 LVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFY 477
+ GL G+ ++ + M+ L T L K F+
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 21/353 (5%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++NL++ L K ++ R M E L T+ ++ D C + DEAV+ D M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD--------PDGDSFAILLE 225
G V N L+ +C++ + L RV K+VD P+ ++ L+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGD--------LTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
G +G +++A MV + P V Y T + L++ ++ +A++ L M+
Sbjct: 301 GLCLKGKLDKAVSLLERMVSS-KCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
+S + L K + A+ LW M G PN+++Y+ ++ LC +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK--PNIVVYSVLVDGLCREGKPNEA 416
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
++M+ G P++ TY+ + + K E + + EM K + I
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 406 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 458
L + A+ +W+ +L GI P + + ++ GL +G + + EML
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 11/359 (3%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G SP +N+++D L K G ++ V M G + + T+ ++ C GK D+A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
V + M + V +L++ + +Q T + ++ + +++L+ G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 286
KEG EEA + +M E+ +++ Y + L R + +EA + L M C
Sbjct: 372 LFKEGKAEEAMSLWRKMAEK--GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 287 PTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVF 346
P +S+ + K AVQ+W M G + N Y+ +I LC V
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS--RNKFCYSVLIDGLCGVGRVKEAM 487
Query: 347 RFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITML 406
+ +M+ G PD++ Y+ I + L + K +HEM+ E +P +L
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE-EPKSQPDVVTYNIL 546
Query: 407 LDA----DEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDV-RRFAEEMLNR 460
LD + A+++ N +L+ G P + N L L D R F EE++ R
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 14/286 (4%)
Query: 217 GDS-FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL-IRGKQ--VDE 272
GDS + ++E + G+ + K + R E V+ +F++ GK D+
Sbjct: 76 GDSTLSSMIESYANSGDFDSVEKLLSRI--RLE---NRVIIERSFIVVFRAYGKAHLPDK 130
Query: 273 ALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVG--IGFNLMPNLIMY 329
A+ M E C ++K F++ L++++ ++ +D +V + N+ PN + +
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
N VI LC VD F M PD TY + + L K +R+ E EM
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 449
P+P+ I L + ++ + + G +P E + N L+ GL G+L
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 450 VRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSMRDI--FDSLERR 493
E M++ + + +VT L + R+ + S+E R
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 173/419 (41%), Gaps = 11/419 (2%)
Query: 46 APYISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWA 105
A + S RI+ + H+ +E AL +G+ P L+ VL D+ + FF WA
Sbjct: 80 ASDVEKSYRILRKF--HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWA 137
Query: 106 GRGQRL--SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDG--VLSLPTFASIFDSYCGAG 161
+ R S + MV +L K +F +W + M+++ ++ F + + A
Sbjct: 138 AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASAD 197
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
+A+ D M G E D LL A+C+ A + ++ + F
Sbjct: 198 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKH-GSVKDAAKLFEDMRMRFPVNLRYFT 256
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
LL GW + G + EA +M E + P+ ++ Y L ++ +A LR M+
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEA-GFEPD-IVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD 341
P ++ + L K++ A++++ M + +++ Y A++ C
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER--YECEADVVTYTALVSGFCKWGK 372
Query: 342 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCAT 401
+D + D M+ G P LTY I K + E + +M + E+ P
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 402 AITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
I + E + A+ +WN + ENG+ P + ++ GL + G L + +EM+ R
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 121/320 (37%), Gaps = 51/320 (15%)
Query: 1 MEVMDESPDF------VIKNKIIPSSSSTTTSPTSHNPHRPTRPRFPTHLDAPYISSSAR 54
+EV+DE P F + ++ + + + R RFP +L Y +S
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR--YFTSLLY 260
Query: 55 IICEILAHASSDDIESALACTGIIPTPDLVHEVLQLS----YDSPSSAVDFFR-WAGRGQ 109
C + + + + G PD+V LS + A D R RG
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGF--EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 110 RLSPYAWNLMVDVLGKNGRFEQMWNA-VRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVM 168
+ + +++ L K R E+ V + + + + T+ ++ +C GK D+ +
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI 378
Query: 169 SFDVMSMHGVEQDVVAVNSLLSAICRQEN--------QTSRALEF--------------- 205
D M G+ + ++ A ++E+ + R +E+
Sbjct: 379 VLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLAC 438
Query: 206 -LNRVKKIV-----------DPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEH 253
L VK+ V P D+F I++ G +G + EA+ F EMV R ++
Sbjct: 439 KLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ 498
Query: 254 VLAYETFLITLIRGKQVDEA 273
+ L T+++ K+++ A
Sbjct: 499 YGTLKLLLNTVLKDKKLEMA 518
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 7/315 (2%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + + Y + + + L ++ + E+ +MK+ GVL +L T++++ D YC G +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICR-QENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
+ + + + +VV +L+ C+ +E T+R+L F++ VK VDP+ + L+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL-FVHMVKFGVDPNLYVYNCLIH 347
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
G K GN+ EA EM E +P+ V Y + L QV EA + + MK E
Sbjct: 348 GHCKSGNMLEAVGLLSEM-ESLNLSPD-VFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
FP+ +++ + K + A+ L M G PN+I ++ +I CN D+
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE--PNIITFSTLIDGYCNVRDIKAA 463
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
+ +M G PD +TY + + K + E + + +M++ P A +
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 406 LLDADEPEIAIEIWN 420
+AI+ +
Sbjct: 524 FWKEGRLSVAIDFYQ 538
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 9/382 (2%)
Query: 104 WAGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGA 160
W R + SP A +++ L + RF+ +W ++M G++ + + +F
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDS 219
G Y + D M+ G++ +V + +CR +N+ A + +KK V P+ +
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR-DNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
++ +++G+ K GNV +A + E++ E P +V+ + T + + +++ A
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVA-ELLP-NVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNN 339
M P L ++ + K + AV L M + NL P++ Y +I LC
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL--NLSPDVFTYTILINGLCIE 387
Query: 340 DDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNC 399
D V R F +M FP S TYN + K + + EM + +P +
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 400 ATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 459
+T I + + + A+ ++ + GI+P + L+ + + R +ML
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 460 RRILIYEVTMHKLKKAFYNESR 481
I + T L F+ E R
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGR 529
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 133/352 (37%), Gaps = 69/352 (19%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVR-VMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y ++ M+D K G Q + + ++ + + ++ F ++ D +C A + A F
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEG 231
M GV+ ++ N L+ C+ N A+ L+ ++ + + PD ++ IL+ G E
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNML-EAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 232 NVEEANKTFGEMV-ERF----------------EWNPEHVL---------AYETFLITL- 264
V EAN+ F +M ER E+N E L E +IT
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 265 --------IRGKQVDEALKFLRVMKG------------------ENCFPTLKFFSNALDI 298
+R + L F +KG N L+ +S+ L+
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 299 LVKLNDSTHAV---QLWD---IMVGIGFNLMPNL-------IMYNAVIGLLCNNDDVDNV 345
+ ND T A W + V I F N + + +I LC N +
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPL 397
RFF M G PD +Y + + ++ KR+ + +MIK P L
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 107 RGQRLSPYA--WNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKY 163
+ +R+ P + +N ++ K EQ + M GV ++ TF+++ D YC
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAIL 223
A+ + M++ G+ DVV +L+ A ++ N + + ++ + P+ +FA L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 224 LEGWEKEGNVEEANKTFGE-MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
++G+ KEG + A + E +R WN HV + + L + + A +F M+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWN--HV-GFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIM 328
P + + + L ++ T + L M+ G ++PNL++
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG--ILPNLLV 621
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 7/358 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
LVH + Q ++ S AV R +G + + +++ L K G + N + M++
Sbjct: 186 LVHGLFQ--HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 142 DGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + + +I D C D+A F+ M G++ DV N L+S +C +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + ++K ++PD F L++ + KEG + EA K + EMV+ P+ V+AY T
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD-VVAYNTL 362
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGF 320
+ + K+V+E ++ R M ++ + + D +A ++ MV G
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 321 NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEV 380
+ P+++ YN ++ LCNN +V+ F+ M D +TY + E L K +V +
Sbjct: 423 H--PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 381 EKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 438
F + +P + T ++ E A ++ + E+G LP + N L+
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 11/336 (3%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ T S+ + +C + EAV D M G + D V +L+ + Q N+ S A+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL-FQHNKASEAVAL 202
Query: 206 LNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
+ R V K PD ++ ++ G K G + A +M E+ + + V+ Y T + L
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEAD-VVIYNTIIDGL 260
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ K +D+A M+ + P + ++ + L + A +L M + N+ P
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM--LEKNINP 318
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKNKRVHEVEKF 383
+L+ +NA+I + + +D+MV FPD + YN + + K KRV E +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 384 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRN 443
F EM + + T I A + + A ++ ++ +G+ P + N LL GL N
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 444 LGRLSDVRRFAEEMLNR----RILIYEVTMHKLKKA 475
G + E M R I+ Y + L KA
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 148/356 (41%), Gaps = 19/356 (5%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ ++ + ++ CR+ +Q S AL
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRR-SQLSLALAI 132
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ P + LL G+ + EA +MVE + P+ V + T + L
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTV-TFTTLVHGL 190
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ + EA+ + M + C P L + ++ L K + A+ L + M +
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME--KGKIEA 248
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
++++YN +I LC +D+ F F++M G PD TYN + CL R + +
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG-ILPLEASANELLVGLRN 443
+M++ P + I + + A ++++ ++++ P + N L+ G
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 444 LGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSMRDIFDSLERRCKTSQM 499
R+ + EM R ++ VT L F+ R C +QM
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ------------ARDCDNAQM 412
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 9/336 (2%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSF 220
K D+A+ F M +V + LLSAI + N+ + +++ + + + ++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTY 113
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
+I + + + + A G+M+ + + P ++ + L G ++ EA+ + M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMM-KLGYGPS-IVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNND 340
P F+ + L + N ++ AV L + MV G P+L+ Y AVI LC
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRG 229
Query: 341 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCA 400
+ D ++M D + YN I + L K K + + F++M +P
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 401 TAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
I+ L + A + + +LE I P N L+ G+L + + +EM+
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 461 RILIYEVTMHK-LKKAF--YNESRSMRDIFDSLERR 493
+ +V + L K F Y ++F + +R
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 96 SSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIF 154
++ V F R +L + M++ L K G+ E W+ + GV ++ T+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 155 DSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRA 202
+C G +EA F M G + N+L+ A R ++ + A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 4/320 (1%)
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ +I DS C + ++A F + G+ +VV +L++ +C + A + +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
KK + P+ +++ LL+ + K G V EA + F EMV R +P+ ++ Y + + L +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPD-IVTYSSLINGLCLHDR 310
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
+DEA + +M + C + ++ ++ K ++L+ M G L+ N + Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTY 368
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
N +I DVD FF QM F G PD TYN++ L N + + F +M K
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 449
E + T I + + E A ++ + G+ P + ++ GL G L +
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 450 VRRFAEEMLNRRILIYEVTM 469
V +M ++ + T+
Sbjct: 489 VEALYTKMKQEGLMKNDCTL 508
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 6/317 (1%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L TF + + +C + A+ M G E D V + SL++ CR+ N+ S A+ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR-NRVSDAVSLV 178
Query: 207 NRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
+++ +I PD ++ +++ K V +A F E +ER P +V+ Y + L
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRP-NVVTYTALVNGLC 236
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPN 325
+ +A + L M + P + +S LD VK A +L++ MV + + P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID--PD 294
Query: 326 LIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 385
++ Y+++I LC +D +D + FD MV G D ++YN + K KRV + K F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 386 EMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 445
EM + + T I A + + A E ++ + GI P + N LL GL + G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 446 RLSDVRRFAEEMLNRRI 462
L E+M R +
Sbjct: 415 ELEKALVIFEDMQKREM 431
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 41/334 (12%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + KYD + M + G+ D+ N +++ C Q S AL
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC-CCFQVSLALSI 142
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + L+ G+ + V +A +MVE + P+ ++AY + +L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPD-IVAYNAIIDSL 200
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ K+V++A F + ++ + + P
Sbjct: 201 CKTKRVNDAFDFFKEIERKG-------------------------------------IRP 223
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
N++ Y A++ LCN+ + R M+ P+ +TY+ + + +KN +V E ++ F
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
EM++ P + ++ I L D + A ++++ ++ G L S N L+ G
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYN 478
R+ D + EM R ++ VT + L + F+
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNL 322
T +R ++++A+ M FP++ F+ L +VKL + L M +G +
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG--I 116
Query: 323 MPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 382
+L +N VI C V +M+ G PD +T + + RV +
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 383 FFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLR 442
+M++ ++P + I L A + + I GI P + L+ GL
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 443 NLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSM--RDIFDSLER 492
N R SD R +M+ ++I +T L AF + + +++F+ + R
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 13/214 (6%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFASIFDSYCGAGKYDEAVMSFDVM 173
++N +++ K R E R M + G++S T+ ++ + AG D+A F M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
G+ D+ N LL +C + F + K+ +D D ++ ++ G K G V
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
EEA F + + P+ ++ Y T + L + E MK E
Sbjct: 452 EEAWSLFCSLSLK-GLKPD-IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----- 504
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
D + D T + +L M+ G+ P+L+
Sbjct: 505 ---DCTLSDGDITLSAELIKKMLSCGY--APSLL 533
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 97 SAVDFFRWAGRGQRLSPYAW--NLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASI 153
S +DFF +SP W N+++ L NG E+ M K + L + T+ ++
Sbjct: 389 SQMDFFG-------ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 154 FDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
C GK +EA F +S+ G++ D+V +++S +C +
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 168/371 (45%), Gaps = 22/371 (5%)
Query: 67 DIESALACTGIIPTPDLVHEVLQ---LSYDSPSSAVDFFRWAG--RGQRLSPYAWNLMVD 121
+++ +L+ +GI + DL+ VL+ S+ +P ++F+R+A RG S ++ + M+
Sbjct: 57 ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116
Query: 122 VLGKNGRFEQMWNA-VRVMKEDGVLSLPTFASIF----DSYCGAGKYDEAVMSFDVMSMH 176
+LG+N +F+Q+W + ++D L P + C + E+ F +
Sbjct: 117 ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPD 176
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEA 236
D N+LL +C QE + A + +K PD +F ILL GW+ E
Sbjct: 177 FF--DTACFNALLRTLC-QEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAF 233
Query: 237 NKTF-GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
+ G+ ++ P+ V+ Y + + + +++++A K + M+ E P + ++
Sbjct: 234 FEEMKGKGLK-----PD-VVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 296 LDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
+ L + A ++ M G P++ YNA I C + + + D+MV
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYG--CYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 415
G P++ TYN+ F L + + + M+ NE P +C I M ++ ++A
Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMA 405
Query: 416 IEIWNYILENG 426
+ +W ++ G
Sbjct: 406 MRLWEDMVVKG 416
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 160/348 (45%), Gaps = 12/348 (3%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+ +++ L + R + N V+ M+E G+ ++ T+ + DS C K+++A M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
G+ +V+ N+L++ C++ A++ + ++ + + P+ ++ L++G+ K N
Sbjct: 385 LEKGLMPNVITYNALINGYCKR-GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
V +A +M+ER + P+ V+ Y + + R D A + L +M P +
Sbjct: 443 VHKAMGVLNKMLER-KVLPD-VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 293 SNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQM 352
++ +D L K A L+D + G N PN++MY A+I C VD ++M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVN--PNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 353 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 412
+ P+SLT+N + L + ++ E +M+K QPT I LL +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 413 EIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
+ A + +L +G P + + GRL D AE+M+ +
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD----AEDMMAK 662
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 156/381 (40%), Gaps = 41/381 (10%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N MV+ K G E+ V + E G+ T+ S+ YC D A F+
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 173 MSMHGVEQDVVAVNSLLSAIC-------------------------------RQENQTSR 201
M + G ++ VA L+ +C + + R
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 202 ALEFLNRVKKI----VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAY 257
E LN VK++ + P+ ++ +L++ + E+A + G+M+E+ +V+ Y
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--PNVITY 396
Query: 258 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVG 317
+ + +++A+ + +M+ P + ++ + K N A+ + + M
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM-- 453
Query: 318 IGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRV 377
+ ++P+++ YN++I C + + D+ +R M G PD TY + + L K+KRV
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 378 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 437
E F + + P + I A + + A + +L LP + N L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 438 LVGLRNLGRLSDVRRFAEEML 458
+ GL G+L + E+M+
Sbjct: 574 IHGLCADGKLKEATLLEEKMV 594
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 177/451 (39%), Gaps = 50/451 (11%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRL--SPYAWNLMVDVLGKNGRFEQMWNAVR 137
+P V + L D P +A++F W + R S Y++ ++ +L NG ++ +R
Sbjct: 89 SPSHVSSLFSLDLD-PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFK-IR 146
Query: 138 VMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQEN 197
++ S+ + D K + + + ++ + N+LL+++ R
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLI--------IGCYNTLLNSLARFGL 198
Query: 198 QTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVER----------- 246
++ ++ V P+ ++ ++ G+ K GNVEEAN+ ++VE
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 247 -----------------FEWNP-----EHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
F P + +AY + L +++DEA+ MK +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDN 344
CFPT++ ++ + L + A+ L M G PN+ Y +I LC+ +
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK--PNIHTYTVLIDSLCSQCKFEK 376
Query: 345 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAIT 404
QM+ G P+ +TYN + K + + M + P I
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 405 MLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILI 464
++ + A+ + N +LE +LP + N L+ G G R M +R ++
Sbjct: 437 GYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 465 YEVTMHKLKKAFYNESR--SMRDIFDSLERR 493
+ T + + R D+FDSLE++
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 125/325 (38%), Gaps = 27/325 (8%)
Query: 68 IESALACTGIIPTPD----LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVL 123
+E + G+ PT L+H +L+ D + F + G + + + +
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLK-DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 124 GKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDV 182
+ GR + + M+E+GV L T++S+ Y G+ + A M G E
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 183 VAVNSLLS---------------AICRQEN--QTSRALEFLNR-VKKIVDPDGDSFAILL 224
SL+ +C N + +E L + V+ V P+ S+ L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
G + GN+ A K F M +R E L + L + K+ +EA K + M
Sbjct: 768 LGICEVGNLRVAEKVFDHM-QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDN 344
P L+ + L K + ++ ++ G+ + + + +I + V+
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY--YEDELAWKIIIDGVGKQGLVEA 884
Query: 345 VFRFFDQMVFHGAFPDSLTYNMIFE 369
+ F+ M +G S TY+++ E
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 8/311 (2%)
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ +I D C + + D A+ + M G+ DVV NSL+S +C +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
K+ + PD +F L++ KEG V EA + + EM+ R +P+ ++ Y + L +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPD-IVTYSLLIYGLCMYSR 306
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
+DEA + M + CFP + +S ++ K H ++L+ M G ++ N + Y
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG--VVRNTVTY 364
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
+I C ++ F +MVF G P+ +TYN++ L N ++ + +M K
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 449
N + I + A E A +I+ + G++P + +++GL G
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG---- 480
Query: 450 VRRFAEEMLNR 460
+RR A+ + +
Sbjct: 481 LRREADALFRK 491
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 31/365 (8%)
Query: 130 EQMWNAVRVMKEDGVL-------------SLPTFASIFDSYCGAGKYDEAVMSFDVMSMH 176
E + N +R MK D L S+ F+ + + KYD + ++ M M
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV-DPDGDSFAILLEGWEKEGNVEE 235
G+ ++ N LL+ CR +Q S AL FL ++ K+ +P +F LL G+ + V +
Sbjct: 111 GIPHNLCTCNILLNCFCRC-SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD 169
Query: 236 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
A F +MV + P +V+ Y T + L + KQVD AL L M+ + P + +++
Sbjct: 170 ALYMFDQMVG-MGYKP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 296 LDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
+ L + A ++ M + P++ +NA+I V F+++M+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTK--REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 415
PD +TY+++ L R+ E E+ F M+ P + + I + + E
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 416 IEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR--------RILIYEV 467
++++ + + G++ + L+ G G+L+ AEE+ R I+ Y V
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN----VAEEIFRRMVFCGVHPNIITYNV 401
Query: 468 TMHKL 472
+H L
Sbjct: 402 LLHGL 406
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 7/334 (2%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
F + G G + + +N ++D L K+ + + + + M++DG+ + T+ S+ C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGD 218
+G++ +A M+ + DV N+L+ A C +E + S A EF +++ +DPD
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++++L+ G ++EA + FG MV + + P+ V+ Y + + K+V+ +K
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PD-VVTYSILINGYCKSKKVEHGMKLFC 350
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCN 338
M ++ + + A +++ MV G + PN+I YN ++ LC+
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH--PNIITYNVLLHGLCD 408
Query: 339 NDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 398
N ++ M +G D +TYN+I + K V + + + P
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 399 CATAITMLLDADEPEIAIEIWNYILENGILPLEA 432
T + L A ++ + E+GILP E
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 20/376 (5%)
Query: 117 NLMVDVLGKNGRFE---QMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
N+M+ L K GR + ++W R+ + + L T++S+ C AG D+A F+ +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWE--RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 174 SMHGVEQDVVAVNSLLSAICR-----QENQTSRALEFLNRVKKIVDPDGDSFAILLEGWE 228
DVV N++L CR + + R +E N V + S+ IL++G
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV------SYNILIKGLL 370
Query: 229 KEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 288
+ G ++EA + M + Y F+ L V++AL ++ ++
Sbjct: 371 ENGKIDEATMIWRLMPAK--GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 289 LKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRF 348
+ +++ +D L K A L M G L N + NA+IG L + + F
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL--NSHVCNALIGGLIRDSRLGEASFF 486
Query: 349 FDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 408
+M +G P ++YN++ L K + E F EM++N W+P + + L
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 409 ADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVT 468
+ ++A+E+W+ L++G+ N L+ GL ++G+L D M +R VT
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 469 MHKLKKAFYNESRSMR 484
+ L + F+ S R
Sbjct: 607 YNTLMEGFFKVGDSNR 622
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 163/400 (40%), Gaps = 54/400 (13%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
+F AG L Y N+++ + K FE+ + M ++G + +++++ +
Sbjct: 139 YFETAGVAPNLQTY--NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV--KKIVDPDG 217
AGK D+A+ FD MS GV DV N L+ ++++ + A+E +R+ V P+
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT-AMELWDRLLEDSSVYPNV 255
Query: 218 DSFAILLEG-------------WEK----------------------EGNVEEANKTFGE 242
+ I++ G WE+ GNV++A F E
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 243 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK- 301
+ ER V+ Y T L R ++ E+L+ R+M+ +N + + +IL+K
Sbjct: 316 LDERKA--SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY-----NILIKG 368
Query: 302 -LNDST--HAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAF 358
L + A +W +M G+ + Y I LC N V+ ++ G
Sbjct: 369 LLENGKIDEATMIWRLMPAKGY--AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 359 PDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEI 418
D Y I +CL K KR+ E EM K+ + C I L+ A
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 419 WNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 458
+ +NG P S N L+ GL G+ + F +EML
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 48/307 (15%)
Query: 106 GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE----DGVLSLPTFASIFDSYCGAG 161
+G + + + L NG + A+ VM+E G L + +ASI D C
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNK---ALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSF 220
+ +EA MS HGVE + N+L+ + R +++ A FL + K P S+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIR-DSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL----KF 276
IL+ G K G EA+ EM+E W P+ + Y L L R +++D AL +F
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLEN-GWKPD-LKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 277 LRV-------------------------------MKGENCFPTLKFFSNALDILVKLNDS 305
L+ M+ NC L ++ ++ K+ DS
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 306 THAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYN 365
A +W M +G L P++I YN ++ LC V FFD HG FP T+N
Sbjct: 621 NRATVIWGYMYKMG--LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 366 MIFECLI 372
++ ++
Sbjct: 679 ILVRAVV 685
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 271 DEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
D+AL F R+ + C P ++ ++ L+ V+ L+ G + PNL Y
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG--VAPNLQTY 152
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
N +I + C + + F D M G PD +Y+ + L K ++ + + F EM +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN-GILPLEASANELLVGLRNLGRLS 448
P I L + + A+E+W+ +LE+ + P + N ++ GL GR+
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 449 DVRRFAEEMLN----RRILIYEVTMHKLKKAFYNESRSMRDIFDSLERR 493
D + E M + + Y +H L A +F+ L+ R
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDA--GNVDKAESVFNELDER 319
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 184/454 (40%), Gaps = 44/454 (9%)
Query: 67 DIESALACTGIIPTPDLVHEVLQ--LSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLG 124
D+ LA G+ P+ + +L + + + F +G Y + ++
Sbjct: 225 DVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFC 284
Query: 125 KNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVV 183
K G+ E+ M+E GV ++ TF ++ D G+YDEA M + M G+E ++
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344
Query: 184 AVNSLLSAICR----------------------------------QENQTSRALEFLN-R 208
+ L+ + R + ++A+E +
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRG 267
V K + ++ L++G+ K G + A + EM+ F N ++ + + L
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG---SFTSVICLLCSH 461
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
D AL+F+ M N P + + L K + A++LW + GF + +
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTR 519
Query: 328 MYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
NA++ LC +D FR +++ G D ++YN + K++ E F EM
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 388 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
+K +P + I L + ++ E AI+ W+ NG+LP + + ++ G R
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 448 SDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
+ + F +EM+++ + V + L +A+ R
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 673
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 161/394 (40%), Gaps = 42/394 (10%)
Query: 82 DLVHEVL--QLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRV 138
DL+ EV Q D A+D F A +G S N+++ L + F++ A V
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 264
Query: 139 MKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQ 198
+ + + F + +++C GK +EAV F M GV +VV N+
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT----------- 313
Query: 199 TSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYE 258
+++G G +EA +MVER P ++ Y
Sbjct: 314 ------------------------VIDGLGMCGRYDEAFMFKEKMVER-GMEPT-LITYS 347
Query: 259 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGI 318
+ L R K++ +A L+ M + P + ++N +D ++ A+++ D+MV
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407
Query: 319 GFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVH 378
G +L + YN +I C N DN R +M+ G + ++ + L +
Sbjct: 408 GLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 379 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 438
+F EM+ P T I+ L + A+E+W L G + ++N LL
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 439 VGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKL 472
GL G+L + R +E+L R ++ V+ + L
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 58/361 (16%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLP------TFASIFDSYCGA 160
+G L+ +N ++ KNG Q NA R++KE +LS+ +F S+ C
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNG---QADNAERLLKE--MLSIGFNVNQGSFTSVICLLCSH 461
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE----FLNRVKKIVDPD 216
+D A+ M + + + +L+S +C+ + S+ALE FLN+ +VD
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH-GKHSKALELWFQFLNK-GFVVDTR 519
Query: 217 GDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF 276
+ LL G + G ++EA + E++ R ++Y T + K++DEA F
Sbjct: 520 TSN--ALLHGLCEAGKLDEAFRIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 277 LRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLL 336
L D MV G L P+ Y+ +I L
Sbjct: 576 L-----------------------------------DEMVKRG--LKPDNYTYSILICGL 598
Query: 337 CNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTP 396
N + V+ +F+D +G PD TY+++ + K +R E ++FF EM+ QP
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658
Query: 397 LNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEE 456
+ I + +A+E+ + GI P A+ L+ G+ + R+ + + EE
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 457 M 457
M
Sbjct: 719 M 719
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 110/281 (39%), Gaps = 48/281 (17%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFE---QMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGK 162
RG + Y +++++ L + E Q W+ K +G+L + T++ + D C A +
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCCKAER 638
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFA 221
+E FD M V+ + V N L+ A CR + S ALE +K K + P+ ++
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMALELREDMKHKGISPNSATYT 697
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
L++G VEEA F EM R E +V Y + + Q+ + LR M
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEM--RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 755
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD 341
+N + PN I Y +IG + +
Sbjct: 756 SKN-------------------------------------VHPNKITYTVMIGGYARDGN 778
Query: 342 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 382
V R ++M G PDS+TY +K V E K
Sbjct: 779 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 3/204 (1%)
Query: 273 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAV 332
AL V+ + FP+ + L LV+ N+ + +D++ + P++ ++
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTA 279
Query: 333 IGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 392
I C V+ + F +M G P+ +T+N + + L R E F +M++
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 393 QPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRR 452
+PT + + + L A A + + + G P N L+ G L+
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 453 FAEEMLNRRILIYEVTMHKLKKAF 476
+ M+++ + + T + L K +
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGY 423
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 152/358 (42%), Gaps = 4/358 (1%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGK 162
R +G S A+N ++ L K G+ ++ MK+D +L T+ + D C AGK
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAI 222
D A D M G+ +V VN ++ +C+ + F K+ PD +F
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
L++G K G V++A K + +M++ + + Y + + + ++ K + M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDV 342
+NC P L+ + +D + K + +++ + F +P+ Y+ +I L
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF--VPDARSYSILIHGLIKAGFA 568
Query: 343 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 402
+ + F M G D+ YN++ + K +V++ + EM ++PT + +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 403 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
I L D + A ++ I + L+ G +GR+ + EE++ +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 185/468 (39%), Gaps = 51/468 (10%)
Query: 56 ICEILAHAS-SDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRL--S 112
IC +L E+ L+ P P+ V VL+ D + A+++FRW R L
Sbjct: 39 ICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDV-NRAIEYFRWYERRTELPHC 97
Query: 113 PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
P ++N ++ V+ + F+ + + M G P+ + + G K ++ +DV
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFG--PSVNTCIEMVLGCVKANKLREGYDV 155
Query: 173 MSM---HGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWE 228
+ M A +L+ A N + L +++++ +P F L+ G+
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAF-SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 229 KEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 288
KEG V+ A EM + + + VL Y + + + +VD A KF ++ P
Sbjct: 215 KEGRVDSALSLLDEM-KSSSLDADIVL-YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 289 LKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRF 348
+++ + +L K N AV++++ + +P YN +I + D +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEK--NRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 349 FDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 408
++ G+ P + YN I CL K +V E K F EM K + P I ML
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCR 389
Query: 409 ADEPEIAIEIWNYILENGILPLEASAN--------------------------------- 435
A + + A E+ + + + G+ P + N
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 436 --ELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
L+ GL +GR+ D + E+ML+ + L K F+N R
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 161/385 (41%), Gaps = 38/385 (9%)
Query: 119 MVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHG 177
++D LGK GR + + +++ D + + S+ ++ G+ ++ + M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 178 VEQDVVAVNSLLSAICRQ-ENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEA 236
D+ +N+ + + + E + RA+ + ++ V PD S++IL+ G K G E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANET 571
Query: 237 NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 296
+ F M E + AY + + +V++A + L MK + PT+ + + +
Sbjct: 572 YELFYSMKE--QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 297 DILVKLNDSTHAVQLWD----------------IMVGIGF-----------------NLM 323
D L K++ A L++ ++ G G L
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 324 PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKF 383
PNL +N+++ L ++++ F M P+ +TY ++ L K ++ ++ F
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 384 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRN 443
+ EM K +P+ ++ T I+ L A A +++ NG +P A N ++ GL N
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 444 LGRLSDVRRFAEEMLNRRILIYEVT 468
R D EE R + I+ T
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKT 834
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 169/377 (44%), Gaps = 8/377 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
L+H + + ++ S AV R +G + + ++V+ L K G + + ++ M++
Sbjct: 192 LIHGLFR--HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 142 DGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + + +I D+ C ++A+ F M G+ +VV NSL+ +C +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + +++ ++P+ +F+ L++ + KEG + EA K + EM++R +P+ + Y +
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSL 367
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGF 320
+ ++DEA +M ++CFP + ++ + K ++L+ M G
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG- 426
Query: 321 NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEV 380
L+ N + Y +I + DN F QMV G PD +TY+++ + L N +V
Sbjct: 427 -LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 381 EKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVG 440
F + +++ +P I + A + E +++ + G+ P + ++ G
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 441 LRNLGRLSDVRRFAEEM 457
G + EM
Sbjct: 546 FCRKGLKEEADALFREM 562
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 158/361 (43%), Gaps = 7/361 (1%)
Query: 119 MVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHG 177
++ + K +F+ + + M+ G+ +L T++ + + +C + A+ M G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEA 236
E D+V +NSLL+ C N+ S A+ + ++ ++ PD +F L+ G + EA
Sbjct: 147 YEPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 237 NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 296
MV + P+ ++ Y + L + +D AL L+ M+ P + ++ +
Sbjct: 206 VALVDRMVVK-GCQPD-LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 297 DILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHG 356
D L + A+ L+ M G + PN++ YN++I LCN + R M+
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 357 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 416
P+ +T++ + + +K ++ E EK + EMIK P ++ I D + A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 417 EIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 476
++ ++ P + N L+ G R+ + EM R ++ VT L F
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 477 Y 477
+
Sbjct: 442 F 442
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 151/337 (44%), Gaps = 6/337 (1%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ ++ + L++ CR+ +Q S AL
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRR-SQLSLALAV 138
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + LL G+ + +A G+MVE + P+ + T + L
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-MGYQPDS-FTFNTLIHGL 196
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
R + EA+ + M + C P L + ++ L K D A+ L M + P
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ--GKIEP 254
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFF 384
+++YN +I LCN +V++ F +M G P+ +TYN + CL R + +
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 385 HEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNL 444
+MI+ + P + + I + + A ++++ +++ I P + + L+ G
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 445 GRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
RL + + E M+++ VT + L K F R
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 42/371 (11%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y ++++++ + + + ++MK + T S+ + +C + +AV
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G + D N+L+ + R N+ S A+ ++R V K PD ++ I++ G K G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN------- 284
+++ A +M E+ + P V+ Y T + L K V++AL M +
Sbjct: 236 DIDLALSLLKKM-EQGKIEP-GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 285 ------CF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMV 316
C P + FS +D VK A +L+D M+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 317 GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKR 376
+ P++ Y+++I C +D +D F+ M+ FP+ +TYN + + K KR
Sbjct: 354 KRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 377 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 436
V E + F EM + + T I A E + A ++ ++ +G+LP + +
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 437 LLVGLRNLGRL 447
LL GL N G++
Sbjct: 472 LLDGLCNNGKV 482
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 128/332 (38%), Gaps = 37/332 (11%)
Query: 91 SYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLP 148
+Y + + A++ F +G R + +N ++ L GR+ + M E + ++
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF+++ D++ GK EA +D M ++ D+ +SL++ C + F
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
+ K P+ ++ L++G+ K V+E + F EM +R + + Y T + + +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG--NTVTYTTLIHGFFQAR 445
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQL----------------- 311
+ D A + M + P + +S LD L A+ +
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 312 ---------------WDIMVGIGF-NLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFH 355
WD+ + + PN++ Y ++ C + F +M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 356 GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
G PDS TYN + +++ + EM
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 110/307 (35%), Gaps = 70/307 (22%)
Query: 257 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM- 315
Y I + ++D+A+ M FP++ FS L + K+N + L + M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 316 -VGIGFNLM-------------------------------PNLIMYNAVIGLLCNNDDVD 343
+GI NL P+++ N+++ C+ + +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 344 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAI 403
+ QMV G PDS T+N + L ++ R E M+ QP + +
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 404 TMLLDADEPEIAIE---------------IWNYILE--------------------NGIL 428
L + ++A+ I+N I++ GI
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 429 PLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDI 486
P + N L+ L N GR SD R +M+ R+I VT L AF E + +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 487 FDSLERR 493
+D + +R
Sbjct: 349 YDEMIKR 355
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 165/357 (46%), Gaps = 7/357 (1%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G ++ Y N+MV+ L K+G+ E++ + ++E GV + T+ ++ +Y G +EA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLE 225
+ M G V N++++ +C+ + RA E F ++ + PD ++ LL
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKH-GKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K+G+V E K F +M R + P+ ++ + + + R +D+AL + +K
Sbjct: 349 EACKKGDVVETEKVFSDMRSR-DVVPD-LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNV 345
P ++ + + + A+ L + M+ G + +++ YN ++ LC +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM--DVVTYNTILHGLCKRKMLGEA 464
Query: 346 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITM 405
+ F++M FPDS T ++ + K + + F +M + + + T +
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 406 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 462
+ + A EIW ++ ILP S + L+ L + G L++ R +EM+++ I
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 12/368 (3%)
Query: 81 PDLV-HEVLQLSYDSPSSAVDFFRW--AGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNA 135
PD+V + L +Y S + F A G+ SP Y +N +++ L K+G++E+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 136 VRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICR 194
M G+ T+ S+ C G E F M V D+V +S++S R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 195 QENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEH 253
N +AL + N VK+ + PD + IL++G+ ++G + A EM++ +
Sbjct: 388 SGN-LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ--QGCAMD 444
Query: 254 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWD 313
V+ Y T L L + K + EA K M FP + +D KL + +A++L+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 314 IMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 373
M L +++ YN ++ D+D + MV P ++Y+++ L
Sbjct: 505 KMKEKRIRL--DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 374 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 433
+ E + + EMI +PT + C + I + ++ G +P S
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 434 ANELLVGL 441
N L+ G
Sbjct: 623 YNTLIYGF 630
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 152/346 (43%), Gaps = 9/346 (2%)
Query: 119 MVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIF-DSYCGAGKYDEAVMSFDVMSMHG 177
M+ + ++G ++ +KE G++ +I YC G A+ + M G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEAN 237
DVV N++L +C+++ F ++ + PD + IL++G K GN++ A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 238 KTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 296
+ F +M E R + V+ Y T L + +D A + M + PT +S +
Sbjct: 501 ELFQKMKEKRIRLD---VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 297 DILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHG 356
+ L A ++WD M I N+ P +++ N++I C + + + F ++M+ G
Sbjct: 558 NALCSKGHLAEAFRVWDEM--ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 357 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTP--LNCATAITMLLDADEPEI 414
PD ++YN + ++ + + + +M + + P + + ++ +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 415 AIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
A + ++E G+ P ++ ++ G + L++ R +EML R
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 147/378 (38%), Gaps = 61/378 (16%)
Query: 119 MVDVLGKNGRFEQMWNAV-RVMKEDGVLSL-------PTFA------SIFD----SYCGA 160
M+ +L ++GR + + R+++ GV L TF+ S+FD +Y A
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
K EA +F ++ G + A N+L+ ++ R
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI------------------------- 213
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
GW VE A + E+ +V + L + ++++ FL +
Sbjct: 214 -----GW-----VELAWGVYQEISR--SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNND 340
+ + +P + ++ + A +L + M G GF+ P + YN VI LC +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS--PGVYTYNTVINGLCKHG 319
Query: 341 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCA 400
+ F +M+ G PDS TY + K V E EK F +M + P + +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 401 TAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
+ +++ + + A+ +N + E G++P L+ G G +S EML +
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 461 R----ILIYEVTMHKLKK 474
++ Y +H L K
Sbjct: 440 GCAMDVVTYNTILHGLCK 457
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 2/246 (0%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T + D +C G A+ F M + DVV N+LL + + + + +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
V K + P S++IL+ +G++ EA + + EM+ + P V+ + + R
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPT-VMICNSMIKGYCRSG 599
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIM 328
+ FL M E P ++ + V+ + + A L M L+P++
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 329 YNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 388
YN+++ C + + +M+ G PD TY + + + E + EM+
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 389 KNEWQP 394
+ + P
Sbjct: 720 QRGFSP 725
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 110 RLSPYAWNLMVDVLGKNGRFE---QMWNAVRVMKEDGVLSLP-TFASIFDSYCGAGKYDE 165
RL +N ++D GK G + ++W A V KE +L P +++ + ++ C G E
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIW-ADMVSKE--ILPTPISYSILVNALCSKGHLAE 568
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILL 224
A +D M ++ V+ NS++ CR N S FL + + + PD S+ L+
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGN-ASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
G+ +E N+ +A +M E V Y + L R Q+ EA LR M
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM---- 683
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDN 344
+ G N P+ Y +I + D++
Sbjct: 684 -------------------------------IERGVN--PDRSTYTCMINGFVSQDNLTE 710
Query: 345 VFRFFDQMVFHGAFPD 360
FR D+M+ G PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 162/381 (42%), Gaps = 7/381 (1%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N++++VL G FE+ ++ M++ G ++ T+ ++ YC G++ A+ D M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
GV+ DV N L+ +CR L + K+++ P+ ++ L+ G+ EG V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
A++ EM+ F +P HV + + I EALK +M+ + P+ +
Sbjct: 315 LIASQLLNEMLS-FGLSPNHV-TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMV 353
LD L K + A + M G + I Y +I LC N +D ++M
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNG--VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 354 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 413
G PD +TY+ + K R ++ + + P + +T I +
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 414 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 473
AI I+ ++ G + N L+ L G++++ F M + IL V+ L
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 474 KAFYNESRSMR--DIFDSLER 492
+ N ++ +FD + +
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTK 571
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCG 159
F+ +G S ++ +++D L KN F+ MK +GV + T+ + D C
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGD 218
G DEAV+ + MS G++ D+V ++L++ C+ + A E + R+ ++ + P+G
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGI 474
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++ L+ + G ++EA + + M+ E + + + +L + +V EA +F+R
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCN 338
M + P F ++ + A ++D M +G + P Y +++ LC
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH--PTFFTYGSLLKGLCK 590
Query: 339 NDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 398
+ +F + A D++ YN + + K+ + + F EM++ P
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 399 CATAITMLLDADEPEIAI 416
+ I+ L + IAI
Sbjct: 651 YTSLISGLCRKGKTVIAI 668
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 135/324 (41%), Gaps = 10/324 (3%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + +N++V L K G+ + +R M DG+L + +F + + Y +G+ +A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQEN--QTSRALEFLNRVKKIVDPDGDSFAILL 224
FD M+ G SLL +C+ + + + L+ L+ V VD + LL
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV--MYNTLL 620
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE- 283
K GN+ +A FGEMV+R + Y + + L R + A+ F + +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSY--TYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVD 343
N P ++ +D + K + + M +G P+++ NA+I ++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT--PDIVTTNAMIDGYSRMGKIE 736
Query: 344 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAI 403
+M P+ TYN++ K K V + +I N P L C + +
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 404 TMLLDADEPEIAIEIWNYILENGI 427
+ +++ EI ++I + G+
Sbjct: 797 LGICESNMLEIGLKILKAFICRGV 820
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF + C G+ + A VM+ G+ D ++++S + R +
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
K+ + P+ + L+ G + G+++ A EM+ P +A + L +
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN--VAESAMVRALAKCG 943
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIM 328
+ DEA LR M PT+ F+ + + K + A++L +M G L +L+
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL--DLVS 1001
Query: 329 YNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 372
YN +I LC D+ F +++M G ++ TY + L+
Sbjct: 1002 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 18/236 (7%)
Query: 264 LIRGKQVDEA---LKFLRVMKGENCFPTLKFFS---------NALDILVKLNDSTHAVQ- 310
L+R + D A LK L +M G++ F + + DIL+++ +Q
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQD 141
Query: 311 ---LWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMI 367
++ +M GFN P++ NA++G + + + +V+ F +M+ PD T+N++
Sbjct: 142 SLEIFRLMGLYGFN--PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 199
Query: 368 FECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGI 427
L + +M K+ + PT + T + + AIE+ +++ G+
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259
Query: 428 LPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSM 483
+ N L+ L R++ +M R I EVT + L F NE + +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 130/349 (37%), Gaps = 54/349 (15%)
Query: 117 NLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSM 175
N M+D + G+ E+ + + M ++G +L T+ + Y + + + + +
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 176 HGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEE 235
+G+ D + +SL+ IC + N L+ L A + G VE
Sbjct: 783 NGILPDKLTCHSLVLGIC-ESNMLEIGLKILK-------------AFICRG------VEV 822
Query: 236 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
TF ++ + N E A++ + G +D+ +
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK---------------------DT 861
Query: 296 LDILVKLNDSTHAVQLWDIMV------GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFF 349
D +V + + H Q +++ GI P Y +I LC D+ F
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGIS----PESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 350 DQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDA 409
++M+ H P ++ + + L K + E M+K + PT + T + +
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977
Query: 410 DEPEIAIEIWNYILENGILPLE-ASANELLVGLRNLGRLSDVRRFAEEM 457
A+E+ ++ N L L+ S N L+ GL G ++ EEM
Sbjct: 978 GNVIEALEL-RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
A + MV L K G+ ++ +R M K V ++ +F ++ C G EA+ VM
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
S G++ D+V+ N L++ +C + + + A E +K GD F
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDM-ALAFELYEEMK------GDGF 1030
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 14/386 (3%)
Query: 98 AVDFFRWAGRGQRLSPY----AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFAS 152
AVD F G + P+ +N ++ + K +FE + + M+ G+ L T++
Sbjct: 67 AVDLF---GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI 212
+ +C + A+ M G E D+V ++SLL+ C + + S A+ ++++ ++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK-RISDAVALVDQMVEM 182
Query: 213 -VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD 271
PD +F L+ G EA +MV+R P+ V Y T + L + +D
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLV-TYGTVVNGLCKRGDID 240
Query: 272 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNA 331
AL L M+ + F+ +D L K AV L+ M G + PN++ YN+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG--IRPNVVTYNS 298
Query: 332 VIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNE 391
+I LCN + R M+ P+ +T+N + + K ++ E EK EMI+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 392 WQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVR 451
P + I + + A +++ +++ LP + N L+ G R+ D
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 452 RFAEEMLNRRILIYEVTMHKLKKAFY 477
EM R ++ VT + + F+
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFF 444
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 10/332 (3%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF ++ K EAV D M G + D+V ++++ +C++ + AL LN+
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDLALNLLNK 248
Query: 209 VKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
++ + + F +++ K +VE A F EM E P +V+ Y + + L
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRP-NVVTYNSLINCLCNY 306
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLI 327
+ +A + L M + P + F+ +D K A +L + M+ + P+ I
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID--PDTI 364
Query: 328 MYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 387
YN +I C ++ +D + F MV P+ TYN + K KRV + + F EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 388 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
+ + T I A + + A ++ ++ N + + + LL GL + G+L
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 448 SDV----RRFAEEMLNRRILIYEVTMHKLKKA 475
+ + + I IY + + KA
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 132/338 (39%), Gaps = 43/338 (12%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + K++ + + M G+ D+ + ++ CR+ +Q S AL
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR-SQLSLALAV 140
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF-LIT 263
L ++ K+ +PD + + LL G+ + +A +MVE + P+ TF T
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPD------TFTFTT 193
Query: 264 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLM 323
LI G L N ++ AV L D MV G
Sbjct: 194 LIHG-------------------------------LFLHNKASEAVALVDQMVQRG--CQ 220
Query: 324 PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKF 383
P+L+ Y V+ LC D+D ++M + + +N I + L K + V
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 384 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRN 443
F EM +P + + I L + A + + +LE I P + N L+
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 444 LGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
G+L + + EEM+ R I +T + L F +R
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 140/358 (39%), Gaps = 10/358 (2%)
Query: 92 YDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
Y AVD F +G R + +N +++ L GR+ + M E + ++ T
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
F ++ D++ GK EA + M ++ D + N L++ C F V
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
K P+ ++ L+ G+ K VE+ + F EM +R + + Y T + +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG--NTVTYTTIIQGFFQAGD 448
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMY 329
D A + M + +S L L A+ ++ + L N+ +Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL--NIFIY 506
Query: 330 NAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 389
N +I +C V + F + PD +TYN + L + + E + F +M +
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 390 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
+ P T I L + + E+ + +G + +AS L+ + + GRL
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVG-DASTISLVTNMLHDGRL 620
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 170/387 (43%), Gaps = 8/387 (2%)
Query: 98 AVDFFRWAGRGQRL-SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFD 155
AVD FR + + L + +N + + K ++E + + M+ G+ S+ T + + +
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV-D 214
+C K A + + G E D V N+LL+ +C E + S ALE ++R+ ++
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC-LECRVSEALELVDRMVEMGHK 190
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
P + L+ G G V +A MVE + P V Y L + + Q A+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEV-TYGPVLNVMCKSGQTALAM 248
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIG 334
+ LR M+ N +S +D L K +A L++ M GF ++I YN +IG
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIITYNTLIG 306
Query: 335 LLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 394
CN D+ + M+ P+ +T++++ + +K ++ E ++ EM++ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 395 TPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFA 454
+ + I + E AI++ + ++ G P + N L+ G R+ D
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 455 EEMLNRRILIYEVTMHKLKKAFYNESR 481
EM R ++ VT + L + F +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 147/340 (43%), Gaps = 48/340 (14%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAG 161
R G + + + +++V+ K+G+ +R M+E + L ++ I D C G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D A F+ M + G + D++ N+L+ C A + +K+ + P+ +F+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+L++ + KEG + EA++ EM++R + + Y + + + +++EA++ + +M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDD 341
+ C P DIM +N +I C +
Sbjct: 396 SKGCDP-------------------------DIMT------------FNILINGYCKANR 418
Query: 342 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCAT 401
+D+ F +M G +++TYN + + ++ ++ +K F EM+ +P ++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 402 AITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGL 441
+ L D E E A+EI+ I E S EL +G+
Sbjct: 479 LLDGLCDNGELEKALEIFGKI--------EKSKMELDIGI 510
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
+G + +N ++ GR++ +R M + + ++ TF+ + DS+ GK E
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLN-RVKKIVDPDGDSFAILL 224
A M G+ + + NSL+ C+ EN+ A++ ++ + K DPD +F IL+
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCK-ENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
G+ K +++ + F EM R + + Y T + + +++ A K + M
Sbjct: 411 NGYCKANRIDDGLELFREMSLR--GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDN 344
P + + LD L + A++++ + L ++ +Y +I +CN VD+
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL--DIGIYMIIIHGMCNASKVDD 526
Query: 345 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAIT 404
+ F + G D+ YN++ L + + + + F +M + P L I
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 405 MLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
L D+ A E+ + +G P + S ++++ + + G L
Sbjct: 587 AHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGEL 628
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 133/335 (39%), Gaps = 41/335 (12%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSF 220
K D+AV F M V+ N L SAI + + Q L +++ K + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK-QYELVLALCKQMESKGIAHSIYTL 126
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
+I++ + + + A T G+++ + + P+ V+ + T L L +V EAL+ + M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIM-KLGYEPDTVI-FNTLLNGLCLECRVSEALELVDRM 184
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGL----- 335
PTL + ++ L + AV L D MV GF PN + Y V+ +
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ--PNEVTYGPVLNVMCKSG 242
Query: 336 ------------------------------LCNNDDVDNVFRFFDQMVFHGAFPDSLTYN 365
LC + +DN F F++M G D +TYN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 366 MIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 425
+ R + K +MIK + P + + I + + A ++ +++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 426 GILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 460
GI P + N L+ G RL + + + M+++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCG 159
F R R ++ +++D L NG E+ ++ K L + + I C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
A K D+A F + + GV+ D A N ++S +CR+++ + + F ++ PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 220 FAILLEGWEKEGNVEEANKTFGEM 243
+ IL+ + + A + EM
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEM 604
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 173/391 (44%), Gaps = 15/391 (3%)
Query: 92 YDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTF 150
Y + ++ + F + G + ++N+++ + + GR ++ + + +M+ G + ++
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 151 ASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK 210
+++ + YC G+ D+ +VM G++ + S++ +CR F ++
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 211 KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV 270
+ + PD + L++G+ K G++ A+K F EM R + P+ VL Y + + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPD-VLTYTAIISGFCQIGDM 402
Query: 271 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYN 330
EA K M + P F+ ++ K A ++ + M+ G + PN++ Y
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYT 460
Query: 331 AVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 390
+I LC D+D+ +M G P+ TYN I L K+ + E K +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK-----LVG 515
Query: 391 EWQPTPLNCATAI-TMLLDA----DEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 445
E++ LN T T L+DA E + A EI +L G+ P + N L+ G G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 446 RLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 476
L D + ML + I T + L K +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/416 (18%), Positives = 162/416 (38%), Gaps = 42/416 (10%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+++ +V+ + G +++W + VMK G+ + + SI C K EA +F M
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
G+ D V +L+ C++ + + + F + + PD ++ ++ G+ + G++
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
EA K F EM + P+ V + + + + +A + M C P + ++
Sbjct: 403 VEAGKLFHEMFCK-GLEPDSV-TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRF----- 348
+D L K D A +L M IG L PN+ YN+++ LC + +++ +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 349 ------------------------------FDQMVFHGAFPDSLTYNMIFECLIKNKRVH 378
+M+ G P +T+N++ + +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 379 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 438
+ EK + M+ P + + + + A I+ + G+ P + L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 439 VGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSM--RDIFDSLER 492
G + + +EM + + T L K F + + R++FD + R
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 9/331 (2%)
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
F F G EA F+ M +G+ V + N L+ + + +T+ A+
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 210 KKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
++ V + S+ I++ + G ++EA+ ++E + P+ V++Y T + R
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPD-VISYSTVVNGYCRFG 295
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIM 328
++D+ K + VMK + P + + + +L ++ A + + M+ G ++P+ ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG--ILPDTVV 353
Query: 329 YNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 388
Y +I C D+ +FF +M PD LTY I + + E K FHEM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 389 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 448
+P + I A + A + N++++ G P + L+ GL G L
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 449 DVRRFAEEM----LNRRILIYEVTMHKLKKA 475
EM L I Y ++ L K+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEA 166
G + + + +N +V+ L K+G E+ V + G+ T+ ++ D+YC +G+ D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 167 ---------------VMSFDVM----SMHGVEQD----------------VVAVNSLLSA 191
+++F+V+ +HG+ +D NSL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 192 ICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNP 251
C + N + + + + V PDG ++ L++G K N++EA F EM + +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM--KGKGFS 663
Query: 252 EHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
V Y + ++ K+ EA + M+ E
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L ++ + + C ++ A+ M G E DVV V+SL++ C Q N+ A++ +
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC-QGNRVFDAIDLV 162
Query: 207 NRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
++++++ PD + +++G K G V +A + F M ER + V Y + + L
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM-ERDGVRADAV-TYNSLVAGLC 220
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPN 325
+ +A + +R M + P + F+ +D+ VK + A++L++ M + P+
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PD 278
Query: 326 LIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 385
+ YN++I LC + VD + D MV G PD +TYN + K+KRV E K F
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 386 EMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 420
EM + + T I A P+ A EI++
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 32/311 (10%)
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ +I D C G ++AV FD M GV D V NSL++ +C + A + V
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
+ + P+ +F +++ + KEG EA K + EM R +P+ V Y + + L +
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV-DPD-VFTYNSLINGLCMHGR 294
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM-----VG--IGFNL 322
VDEA + L +M + C P + ++ ++ K +L+ M VG I +N
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 323 M-----------------------PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFP 359
+ PN+ Y+ ++ LC N V+ F+ M
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 360 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 419
D TYN++ + K V + F + +P ++ T I+ + + + ++
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 420 NYILENGILPL 430
+ E+G+LPL
Sbjct: 475 RKMQEDGLLPL 485
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 17/303 (5%)
Query: 98 AVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE----DGVLSLPTFAS 152
AV+ F R G R +N +V L +GR+ +A R+M++ D V ++ TF +
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS---DAARLMRDMVMRDIVPNVITFTA 249
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLN-RVKK 211
+ D + GK+ EA+ ++ M+ V+ DV NSL++ +C + A + L+ V K
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC-MHGRVDEAKQMLDLMVTK 308
Query: 212 IVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD 271
PD ++ L+ G+ K V+E K F EM +R + Y T + + + D
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG--DTITYNTIIQGYFQAGRPD 366
Query: 272 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNA 331
A + M P ++ +S L L A+ L++ M L ++ YN
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL--DITTYNI 421
Query: 332 VIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNE 391
VI +C +V++ + F + G PD ++Y + + ++ + + + +M ++
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 392 WQP 394
P
Sbjct: 482 LLP 484
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 2/226 (0%)
Query: 256 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM 315
+Y + L R + AL + M P + S+ ++ + N A+ L M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 316 VGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 375
+GF P++++YN +I C V++ FD+M G D++TYN + L +
Sbjct: 166 EEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 376 RVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASAN 435
R + + +M+ + P + I + + + A++++ + + P + N
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 436 ELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 481
L+ GL GR+ + ++ + M+ + L VT + L F R
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 39/210 (18%)
Query: 323 MPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 382
+P+++ ++ V+ + + + D V F M G D +YN++ CL + R
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 383 FFHEMIKNEWQPTPLNCATAITMLLDAD-----------------EPEI----------- 414
+M+K ++P + ++ I + P++
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 415 -------AIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEV 467
A+E+++ + +G+ + N L+ GL GR SD R +M+ R I+ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 468 TMHKLKKAFYNE---SRSMRDIFDSLERRC 494
T + F E S +M+ +++ + RRC
Sbjct: 246 TFTAVIDVFVKEGKFSEAMK-LYEEMTRRC 274
>sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protein At5g18390,
mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2
SV=2
Length = 459
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 164/375 (43%), Gaps = 16/375 (4%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYA--WNLMVDVLGKNGRFEQMWNAVR 137
T + V VL+ + S + ++ FF WA +P + + + L + ++E MW ++
Sbjct: 76 TSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILK 135
Query: 138 VMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFD-VMSMHGVEQDVVAVNSLLSAICRQ 195
MK+ + +S T I + Y G D+AV F+ V G +Q V NSLL A+C
Sbjct: 136 QMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC-D 194
Query: 196 ENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHV 254
A + R ++K + PD ++AIL+ GW G ++EA + EM R +NP
Sbjct: 195 VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR-GFNPP-A 252
Query: 255 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDI 314
+ + L+ ++ A + + M P ++ F+ ++ + K + ++++
Sbjct: 253 RGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 315 MVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 374
+G L ++ Y +I + +D FR + V G P Y I + + +N
Sbjct: 313 ACKLG--LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRN 370
Query: 375 KRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL---ENGILPLE 431
+ FF +M P ITM + ++ NY++ E G++P+
Sbjct: 371 GMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK---FVDAANYLVEMTEMGLVPIS 427
Query: 432 ASANELLVGLRNLGR 446
+ + GL+N G+
Sbjct: 428 RCFDMVTDGLKNGGK 442
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 27/217 (12%)
Query: 247 FEW---NPEHV---LAYETFLITLIRGKQVDEALKFLRVMK-------GEN-CFPTLKFF 292
F W NP + + YE +L K+ + K L+ MK GE CF
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF------ 151
Query: 293 SNALDILVKLNDSTHAVQLWDIMVGIGFNL--MPNLIMYNAVIGLLCNNDDVDNVFRFFD 350
I+ + + H Q ++ G+ L + +YN+++ LC+ +
Sbjct: 152 -----IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIR 206
Query: 351 QMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDAD 410
+M+ G PD TY ++ ++ E ++F EM + + P I LL+A
Sbjct: 207 RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAG 266
Query: 411 EPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
E A E+ + + + G +P + N L+ + G +
Sbjct: 267 YLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 140/331 (42%), Gaps = 48/331 (14%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+ ++ V+ K+G+ +R M+E + L ++ I D C G D A F+ M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
+ G + D++ +L+ C A + +K+ + PD +F+ L++ + KEG +
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
EA + EM++R +P+ V Y + + + Q+D+A L +M + C P ++ F
Sbjct: 334 REAEELHKEMIQR-GISPDTV-TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF- 390
Query: 294 NALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMV 353
N +I C + +D+ F +M
Sbjct: 391 ------------------------------------NILINGYCKANLIDDGLELFRKMS 414
Query: 354 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 413
G D++TYN + + + ++ ++ F EM+ +P ++ + L D EPE
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 414 IAIEIWNYILENGILPLEASANELLVGLRNL 444
A+EI+ I E S EL +G+ N+
Sbjct: 475 KALEIFEKI--------EKSKMELDIGIYNI 497
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 158/385 (41%), Gaps = 50/385 (12%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++ +++ L GR + V M E G +L T ++ + C GK +AV+ D M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
G + + V +L +C+ QT+ A+E L +++ + + D ++I+++G K+G+
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKS-GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 233 VEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++ A F EM ++ F+ + ++ Y T + + D+ K LR M P +
Sbjct: 263 LDNAFNLFNEMEIKGFKAD---IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 292 FSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQ 351
FS +D VK A +L +
Sbjct: 320 FSALIDCFVKEGKLREAEELHK-------------------------------------E 342
Query: 352 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 411
M+ G PD++TY + + K ++ + M+ P I A+
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 412 PEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR----ILIYEV 467
+ +E++ + G++ + N L+ G LG+L + +EM++RR I+ Y++
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 468 TMHKLKKAFYNESRSMRDIFDSLER 492
+ L E +IF+ +E+
Sbjct: 463 LLDGL--CDNGEPEKALEIFEKIEK 485
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 168/412 (40%), Gaps = 44/412 (10%)
Query: 75 TGIIPTPDLVHEVLQLSYDSPSSAVD---FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQ 131
TG P VL++ S +A+ + R +L +++++D L K+G +
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 132 MWNAVRVMKEDGVLS-LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLS 190
+N M+ G + + + ++ +C AG++D+ M + DVVA ++L+
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 191 AICRQENQTSRALEFLNR--VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFE 248
C + R E L++ +++ + PD ++ L++G+ KE +++AN MV +
Sbjct: 326 --CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-G 382
Query: 249 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHA 308
P ++ + + + +D+ L+ R M ++ + +L A
Sbjct: 383 CGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 309 VQLWDIMV----------------GIGFNLMP-----------------NLIMYNAVIGL 335
+L+ MV G+ N P ++ +YN +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 336 LCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPT 395
+CN VD+ + F + G PD TYN++ L K + E + F +M ++ P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 396 PLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 447
I L + + ++ I G ++AS +++V + + GRL
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCG-FSVDASTVKMVVDMLSDGRL 612
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 24/304 (7%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L F+ +F +YD + M + G+ ++ ++ +++ CR + S A +
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR-KLSLAFSAM 130
Query: 207 NRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL- 264
++ K+ +PD +F+ L+ G EG V EA + MVE + ++ LITL
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE---------MGHKPTLITLN 181
Query: 265 -------IRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHAVQLWDIMV 316
+ GK D L R++ E F P + L ++ K + A++L M
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMV--ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 317 GIGFNLMPNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKR 376
L + + Y+ +I LC + +DN F F++M G D + Y + R
Sbjct: 240 ERKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 377 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 436
+ K +MIK + P + + I + + A E+ +++ GI P +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 437 LLVG 440
L+ G
Sbjct: 358 LIDG 361
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%)
Query: 324 PNLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKF 383
P LI ++ + ++ D V QM G + T +++ C + +++
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 384 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRN 443
++IK ++P + +T I L A+E+ + ++E G P + N L+ GL
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 444 LGRLSDVRRFAEEMLNRRILIYEVT 468
G++SD + M+ EVT
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVT 214
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 6/194 (3%)
Query: 271 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM--VGIGFNLMPNLIM 328
D+A+ + M P L FS ++ + + L M GI NL IM
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 329 YNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 388
N C + F +++ G PD++T++ + L RV E + M+
Sbjct: 114 INCC----CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 389 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 448
+ +PT + + L + A+ + + ++E G P E + +L + G+ +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 449 DVRRFAEEMLNRRI 462
+M R+I
Sbjct: 230 LAMELLRKMEERKI 243
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 7/299 (2%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF + CG GK ++A+ VMS G E D+V N+L+ C+ N+ ++A E
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS-NELNKASEMFKD 266
Query: 209 VK--KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIR 266
VK + PD ++ ++ G+ K G + EA+ +M+ R P +V + + +
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML-RLGIYPTNV-TFNVLVDGYAK 324
Query: 267 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNL 326
++ A + M CFP + F++ +D ++ + +LW+ M G + PN
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG--MFPNA 382
Query: 327 IMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 386
Y+ +I LCN + + Q+ P YN + + K +V+E E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 387 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 445
M K + +P + I A+ I++ ++ G P + + + LL L G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 145/358 (40%), Gaps = 16/358 (4%)
Query: 110 RLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA-- 166
R S + +NL+ L K G + MK DGV + + S+ GK A
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 167 --VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILL 224
+ SF+V E + VNSLL+ + + + F ++ D +F IL+
Sbjct: 160 LLLQSFEV------EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR-VMKGE 283
G G E+A + G M F P+ ++ Y T + + ++++A + + V G
Sbjct: 214 RGLCGVGKAEKALELLGVM-SGFGCEPD-IVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMPNLIMYNAVIGLLCNNDDVD 343
C P + +++ + K A L D M+ +G + P + +N ++ ++
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG--IYPTNVTFNVLVDGYAKAGEML 329
Query: 344 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAI 403
+M+ G FPD +T+ + + + +V + + + EM P + I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 404 TMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR 461
L + + A E+ + I+P N ++ G G++++ EEM ++
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S T+ + S C AG +D A F+ M GV + + L+S+ + L F
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK-----LHF 156
Query: 206 LNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
+ A+LL+ +E EG N + L TL+
Sbjct: 157 -------------ATALLLQSFEVEGCCMVVN---------------------SLLNTLV 182
Query: 266 RGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMVGIGFNLMP 324
+ +V++A+K F ++ ++C T K F+ + L + + A++L +M G G P
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALELLGVMSGFGCE--P 239
Query: 325 NLIMYNAVIGLLCNNDDVDNVFRFFDQMVFHGAF--PDSLTYNMIFECLIKNKRVHEVEK 382
+++ YN +I C +++++ F V G+ PD +TY + K ++ E
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 383 FFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLR 442
+M++ PT + + A E A EI ++ G P + L+ G
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 443 NLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSMR 484
+G++S R EEM R + T L A NE+R ++
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Query: 106 GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLP-TFASIFDSYCGAGKYD 164
RG + + ++++++ L R + + + ++ P + + D +C AGK +
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 165 EAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILL 224
EA + + M + D + L+ C + F V PD + + LL
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 225 EGWEKEGNVEEA 236
K G +EA
Sbjct: 495 SCLLKAGMAKEA 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,759,959
Number of Sequences: 539616
Number of extensions: 7936849
Number of successful extensions: 26090
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 21724
Number of HSP's gapped (non-prelim): 1839
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)