Query 010831
Match_columns 499
No_of_seqs 425 out of 2703
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:10:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 5.1E-68 1.7E-72 542.3 21.3 287 75-434 26-318 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 4.7E-61 1.6E-65 473.7 22.5 233 192-428 8-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 1.9E-46 6.4E-51 353.0 20.9 177 195-431 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 2.4E-45 8.1E-50 345.3 21.4 177 194-431 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 7.4E-43 2.5E-47 325.4 15.8 169 196-428 1-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 2.8E-27 9.5E-32 204.4 11.9 96 336-434 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 4.3E-25 1.5E-29 194.3 10.7 94 340-434 1-99 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.8E-24 6.2E-29 185.0 5.2 98 75-173 1-101 (103)
9 2ctt_A DNAJ homolog subfamily 99.9 2.6E-23 8.8E-28 178.1 5.3 103 195-301 1-103 (104)
10 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.1E-22 3.9E-27 164.6 7.2 74 75-148 1-74 (77)
11 2ctr_A DNAJ homolog subfamily 99.8 7.3E-22 2.5E-26 164.0 6.2 75 75-149 5-79 (88)
12 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.9E-21 6.4E-26 161.6 7.8 74 72-145 12-85 (88)
13 2dn9_A DNAJ homolog subfamily 99.8 3.6E-21 1.2E-25 156.4 7.2 71 75-145 5-76 (79)
14 2ctp_A DNAJ homolog subfamily 99.8 2.5E-21 8.7E-26 157.0 5.8 70 76-145 6-75 (78)
15 2dmx_A DNAJ homolog subfamily 99.8 4E-21 1.4E-25 160.8 6.5 74 76-149 8-83 (92)
16 2ej7_A HCG3 gene; HCG3 protein 99.8 4.9E-21 1.7E-25 156.8 6.3 72 76-147 8-81 (82)
17 2och_A Hypothetical protein DN 99.8 7E-21 2.4E-25 152.5 6.2 70 73-144 4-73 (73)
18 2lgw_A DNAJ homolog subfamily 99.8 5.8E-21 2E-25 162.0 6.0 73 76-148 1-75 (99)
19 2o37_A Protein SIS1; HSP40, J- 99.8 4.6E-21 1.6E-25 160.5 5.3 75 72-148 3-77 (92)
20 2ctq_A DNAJ homolog subfamily 99.8 9.4E-21 3.2E-25 164.3 7.4 75 73-147 16-91 (112)
21 2yua_A Williams-beuren syndrom 99.8 2.6E-20 9E-25 158.0 5.9 69 74-142 14-83 (99)
22 2ctw_A DNAJ homolog subfamily 99.8 2.8E-20 9.6E-25 160.6 6.1 75 73-147 13-88 (109)
23 1wjz_A 1700030A21RIK protein; 99.8 5.3E-20 1.8E-24 154.4 4.9 70 74-143 13-89 (94)
24 3apq_A DNAJ homolog subfamily 99.8 2.1E-19 7E-24 171.2 5.3 73 77-149 2-75 (210)
25 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.6E-19 8.9E-24 154.4 4.6 72 72-143 10-86 (109)
26 2ys8_A RAB-related GTP-binding 99.7 8.1E-19 2.8E-23 146.3 6.1 64 74-137 24-87 (90)
27 1gh6_A Large T antigen; tumor 99.7 1.2E-18 4E-23 151.4 1.3 65 76-143 7-73 (114)
28 2l6l_A DNAJ homolog subfamily 99.7 6.2E-18 2.1E-22 154.7 6.0 69 75-143 8-83 (155)
29 1faf_A Large T antigen; J doma 99.7 5.5E-18 1.9E-22 137.8 4.9 65 77-145 11-77 (79)
30 2pf4_E Small T antigen; PP2A, 99.7 3.5E-18 1.2E-22 158.4 1.2 65 76-143 10-76 (174)
31 3bvo_A CO-chaperone protein HS 99.7 3.9E-17 1.3E-21 156.1 8.3 95 46-140 10-114 (207)
32 1iur_A KIAA0730 protein; DNAJ 99.7 2.4E-17 8.1E-22 136.7 3.7 64 75-138 14-79 (88)
33 3apo_A DNAJ homolog subfamily 99.6 2.1E-17 7.1E-22 186.2 1.1 78 72-149 16-94 (780)
34 1n4c_A Auxilin; four helix bun 99.6 8.1E-17 2.8E-21 150.1 4.9 63 76-138 116-182 (182)
35 3hho_A CO-chaperone protein HS 99.6 1.1E-16 3.8E-21 149.1 5.5 67 76-142 3-77 (174)
36 2qwo_B Putative tyrosine-prote 99.6 1.5E-16 5.1E-21 132.6 3.8 58 74-131 30-91 (92)
37 1fpo_A HSC20, chaperone protei 99.6 2E-16 6.7E-21 147.0 4.4 65 78-142 2-74 (171)
38 3ag7_A Putative uncharacterize 99.6 1.8E-16 6.3E-21 135.8 2.1 61 72-133 36-104 (106)
39 1exk_A DNAJ protein; extended 99.6 1.8E-15 6.3E-20 122.6 7.1 78 212-293 1-78 (79)
40 2guz_A Mitochondrial import in 99.6 6.6E-16 2.3E-20 122.9 4.1 57 77-136 14-71 (71)
41 3uo3_A J-type CO-chaperone JAC 99.6 6.2E-16 2.1E-20 144.8 3.3 66 75-142 9-81 (181)
42 1nlt_A Protein YDJ1, mitochond 99.3 1.7E-12 5.7E-17 127.5 6.8 116 223-348 55-246 (248)
43 2y4t_A DNAJ homolog subfamily 99.0 2.8E-10 9.6E-15 116.5 5.1 65 76-140 381-449 (450)
44 3i38_A Putative chaperone DNAJ 99.0 3.8E-10 1.3E-14 97.0 5.0 52 296-349 39-90 (109)
45 1xao_A YDJ1, mitochondrial pro 98.9 9.7E-10 3.3E-14 96.2 5.7 54 295-348 34-91 (121)
46 2guz_B Mitochondrial import in 98.7 9.5E-09 3.3E-13 79.9 4.7 52 78-132 5-59 (65)
47 2q2g_A HSP40 protein, heat sho 98.6 5E-08 1.7E-12 91.0 5.9 51 296-346 121-172 (180)
48 3agx_A DNAJ homolog subfamily 98.6 5.1E-08 1.7E-12 91.1 5.8 51 296-346 121-172 (181)
49 3lz8_A Putative chaperone DNAJ 98.5 1.3E-07 4.6E-12 96.2 6.7 74 343-417 138-225 (329)
50 1c3g_A Heat shock protein 40; 98.4 4.2E-07 1.4E-11 84.0 7.7 72 346-418 1-81 (170)
51 3pmq_A Decaheme cytochrome C M 98.1 7.2E-08 2.5E-12 105.8 -5.2 78 199-276 168-257 (669)
52 3lcz_A YCZA, inhibitor of trap 97.7 7.1E-06 2.4E-10 61.0 1.1 30 265-294 9-38 (53)
53 1exk_A DNAJ protein; extended 97.6 2.1E-05 7.1E-10 63.0 2.7 47 237-292 9-63 (79)
54 2ctt_A DNAJ homolog subfamily 97.5 3.7E-05 1.3E-09 65.0 2.9 47 222-280 45-96 (104)
55 2bx9_A Anti-trap, AT, tryptoph 97.5 1.4E-05 4.7E-10 59.4 -0.1 39 222-263 9-48 (53)
56 2bx9_A Anti-trap, AT, tryptoph 97.1 0.00021 7.2E-09 53.0 2.4 27 266-292 10-36 (53)
57 3lcz_A YCZA, inhibitor of trap 96.7 0.0007 2.4E-08 50.1 2.4 28 222-252 9-36 (53)
58 2pzi_A Probable serine/threoni 89.9 0.14 4.8E-06 56.3 3.0 48 74-128 626-675 (681)
59 2qkd_A Zinc finger protein ZPR 71.0 13 0.00044 38.3 8.8 26 363-392 295-320 (404)
60 1ltl_A DNA replication initiat 58.1 11 0.00039 36.5 5.4 35 240-278 135-169 (279)
61 1ltl_A DNA replication initiat 46.3 33 0.0011 33.1 6.5 43 249-291 118-168 (279)
62 2qkd_A Zinc finger protein ZPR 42.6 26 0.00087 36.1 5.2 79 237-315 10-112 (404)
63 2vl6_A SSO MCM N-TER, minichro 37.0 1.4E+02 0.005 28.2 9.4 35 239-276 141-179 (268)
64 1uzc_A Hypothetical protein FL 32.9 53 0.0018 25.2 4.4 53 88-142 11-66 (71)
65 2cqn_A Formin-binding protein 31.5 41 0.0014 26.2 3.6 54 89-143 6-63 (77)
66 2fiy_A Protein FDHE homolog; F 29.8 14 0.00049 36.6 0.8 51 225-287 185-261 (309)
67 1msz_A DNA-binding protein smu 28.9 34 0.0012 27.4 2.8 25 412-436 35-59 (86)
68 3nyb_B Protein AIR2; polya RNA 27.4 22 0.00077 28.2 1.4 57 222-283 5-63 (83)
69 2jne_A Hypothetical protein YF 26.8 73 0.0025 26.1 4.3 51 223-287 33-89 (101)
70 1qo8_A Flavocytochrome C3 fuma 26.4 7.2 0.00025 41.6 -2.3 66 224-289 14-86 (566)
71 1y0p_A Fumarate reductase flav 25.3 6.9 0.00023 41.7 -2.7 66 224-289 13-89 (571)
72 3zxf_A Galectin-7; sugar bindi 25.1 99 0.0034 26.4 5.3 43 375-417 9-59 (138)
73 2vl6_A SSO MCM N-TER, minichro 24.2 67 0.0023 30.7 4.5 13 238-250 167-179 (268)
74 2b7e_A PRE-mRNA processing pro 22.0 77 0.0026 23.5 3.3 49 92-142 3-56 (59)
75 4a3n_A Transcription factor SO 20.0 1.2E+02 0.004 22.2 4.2 42 95-140 14-55 (71)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=5.1e-68 Score=542.33 Aligned_cols=287 Identities=33% Similarity=0.557 Sum_probs=161.1
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC-
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG- 153 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~- 153 (499)
...|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+|+..+...+.+++
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~ 105 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR 105 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence 3579999999999999999999999999999999998888999999999999999999999999999544322111110
Q ss_pred ---CCCC-ccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccccc
Q 010831 154 ---SSAY-TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCT 229 (499)
Q Consensus 154 ---~~~~-~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~ 229 (499)
.++| ..++.|||++|||++ +++ + ++.+..+|.|+.++|.|+|+|+|+|++++|.+++.+.|
T Consensus 106 ~~~~~~f~~~~f~diF~~~Fg~~--g~~--------~-~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~---- 170 (329)
T 3lz8_A 106 QTHEQSYSQQDFDDIFSSMFGQQ--AHQ--------R-RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN---- 170 (329)
T ss_dssp ------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----
T ss_pred ccccCCcCCCchhhhhHhhhcCc--CCC--------C-CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----
Confidence 1112 124568888888731 110 0 11124679999999999999999999999998765421
Q ss_pred CcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCC
Q 010831 230 GTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGS 309 (499)
Q Consensus 230 GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~ 309 (499)
|.|++ .+...++|+|+||||+++|+
T Consensus 171 -----------------g~G~v--------------------------------------~~~~~~~l~V~IP~Gv~~G~ 195 (329)
T 3lz8_A 171 -----------------VFGMI--------------------------------------ESETPKTLNVKIPAGVVDGQ 195 (329)
T ss_dssp -----------------SCC-C--------------------------------------CEEEEEEEEEEECTTCCTTC
T ss_pred -----------------CCeEE--------------------------------------EEecceEEEEeCCCCCCCCC
Confidence 22221 12235689999999999999
Q ss_pred EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEE
Q 010831 310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLV 389 (499)
Q Consensus 310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~ 389 (499)
+|||+|+|+++++++++|||||+|+|++|+.|+|+|+||+++++|+++|||||++++|+||||++.|+||+|+|||++++
T Consensus 196 ~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~r 275 (329)
T 3lz8_A 196 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR 275 (329)
T ss_dssp EEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEE
T ss_pred EEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEE
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHh-hc
Q 010831 390 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS-LR 434 (499)
Q Consensus 390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~-~~ 434 (499)
|+|+|||.. ..||||||+|+|+||++||++|+++|++|++ ..
T Consensus 276 l~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~ 318 (329)
T 3lz8_A 276 IKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA 318 (329)
T ss_dssp ETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT
T ss_pred EcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence 999999975 3689999999999999999999999999999 44
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=4.7e-61 Score=473.71 Aligned_cols=233 Identities=27% Similarity=0.509 Sum_probs=209.6
Q ss_pred cccCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccce-eeeeeCCC
Q 010831 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLF-SQVSVCPS 270 (499)
Q Consensus 192 ~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~-~~~~~C~~ 270 (499)
..+|+|++++|.|||+|||+|++++|.+++.+.|+.|+|+|+++++ ..+|+.|+|+|++++.+++++ ++ ++.++|+.
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 4579999999999999999999999999999999999999999998 599999999999988888776 44 44589999
Q ss_pred CCCCCEEE--ceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831 271 CGGEGEVI--SEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL 348 (499)
Q Consensus 271 C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL 348 (499)
|+|+|++| .++|..|+|.|++++.++|+|+||||+++|++|+|+|+|++++ ++++|||||+|+|++|+.|+|+|+||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL 164 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDL 164 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEE
Confidence 99999999 8999999999999999999999999999999999999999975 56999999999999999999999999
Q ss_pred EEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCC--CCHHH
Q 010831 349 FSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR--ISAKE 423 (499)
Q Consensus 349 ~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~--Ls~~q 423 (499)
|++++|+|+|||||++++|+||||+ +.|+||+| ||||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|
T Consensus 165 ~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q 243 (248)
T 1nlt_A 165 VYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEEN 243 (248)
T ss_dssp EEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC--------
T ss_pred EEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHH
Confidence 9999999999999999999999996 89999999 99999999999999987655 6899999999999999 99999
Q ss_pred HHHHH
Q 010831 424 RELLE 428 (499)
Q Consensus 424 ~~lL~ 428 (499)
+++|+
T Consensus 244 ~~~l~ 248 (248)
T 1nlt_A 244 LKKLE 248 (248)
T ss_dssp -----
T ss_pred HHhhC
Confidence 99985
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.9e-46 Score=352.99 Aligned_cols=177 Identities=25% Similarity=0.369 Sum_probs=158.8
Q ss_pred CcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCC
Q 010831 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE 274 (499)
Q Consensus 195 g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~ 274 (499)
++|++++|.|||+|||+|+++++.+++
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 468999999999999999999986532
Q ss_pred CEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeee
Q 010831 275 GEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISI 354 (499)
Q Consensus 275 G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I 354 (499)
+|..|+|.|++++.++++|+||||+++|++|+|+|+|++++ ++++|||||+|++++|+.|+|+|+|||++++|
T Consensus 29 ------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I 101 (181)
T 3agx_A 29 ------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI 101 (181)
T ss_dssp ------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred ------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence 24445555556678999999999999999999999999987 67999999999999999999999999999999
Q ss_pred CHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHH
Q 010831 355 SYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431 (499)
Q Consensus 355 sl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~ 431 (499)
+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|++|+
T Consensus 102 sl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 102 SLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp EHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred CHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 9999999999999999995 7999999999999999999999987655678999999999999999999999999996
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-45 Score=345.28 Aligned_cols=177 Identities=21% Similarity=0.419 Sum_probs=163.4
Q ss_pred cCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCC
Q 010831 194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGG 273 (499)
Q Consensus 194 ~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G 273 (499)
+++|++++|.|||+|||+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3689999999999999999999999998887631
Q ss_pred CCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEee
Q 010831 274 EGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS 353 (499)
Q Consensus 274 ~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~ 353 (499)
|++++.++++|+||||+++|++|+|+|+|+++..|+++|||||+|++++|+.|+|+|+|||++++
T Consensus 36 ---------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (180)
T 2q2g_A 36 ---------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVT 100 (180)
T ss_dssp ---------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred ---------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEE
Confidence 33455789999999999999999999999997678999999999999999999999999999999
Q ss_pred eCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHH
Q 010831 354 ISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431 (499)
Q Consensus 354 Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~ 431 (499)
|+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|++|+
T Consensus 101 Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 101 IPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp EEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred cCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999999999999996 7899999999999999999999987665678999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=7.4e-43 Score=325.39 Aligned_cols=169 Identities=22% Similarity=0.449 Sum_probs=154.8
Q ss_pred cceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCC
Q 010831 196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG 275 (499)
Q Consensus 196 ~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G 275 (499)
+|++++|.|||+|||+|+++++.+++.. +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~----------------------------------------------- 29 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P----------------------------------------------- 29 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence 4789999999999999999999987641 0
Q ss_pred EEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeC
Q 010831 276 EVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISIS 355 (499)
Q Consensus 276 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Is 355 (499)
.|++ +.++++|+||||+++|++|+|+|+|+++.+|+++|||||+|++++|+.|+|+|+|||++++|+
T Consensus 30 ------------~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is 96 (170)
T 1c3g_A 30 ------------HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96 (170)
T ss_dssp ------------TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred ------------CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence 1222 468899999999999999999999998888999999999999999999999999999999999
Q ss_pred HHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 010831 356 YLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLE 428 (499)
Q Consensus 356 l~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~ 428 (499)
++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|+
T Consensus 97 l~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 97 FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp HHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred HHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 999999999999999996 8999999999999999999999987665578999999999999999999999874
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.94 E-value=2.8e-27 Score=204.44 Aligned_cols=96 Identities=29% Similarity=0.440 Sum_probs=90.6
Q ss_pred EeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEc
Q 010831 336 EEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTI 415 (499)
Q Consensus 336 ~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~ 415 (499)
++|+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+|+|+|++++|+|+|||. .+ .+|||||+|+|+|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~--~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT--HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS--CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC--CCcCEEEEEEEEC
Confidence 68999999999999999999999999999999999999999999999999999999999998 32 6999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhc
Q 010831 416 PNRISAKERELLEELASLR 434 (499)
Q Consensus 416 P~~Ls~~q~~lL~~l~~~~ 434 (499)
|++||++|+++|++|+++.
T Consensus 79 P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 79 PTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999974
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.3e-25 Score=194.27 Aligned_cols=94 Identities=29% Similarity=0.420 Sum_probs=84.5
Q ss_pred ccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010831 340 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 416 (499)
Q Consensus 340 ~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P 416 (499)
.|+|+|+|||++++|+|.+|+||+++.|+||||+ +.|+||+| +|||++++|+|+|||..+++ .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999997 89999999 99999999999999987665 68999999999999
Q ss_pred CC--CCHHHHHHHHHHHhhc
Q 010831 417 NR--ISAKERELLEELASLR 434 (499)
Q Consensus 417 ~~--Ls~~q~~lL~~l~~~~ 434 (499)
+. |+++|+++|++|+...
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~ 99 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPR 99 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHcccc
Confidence 99 9999999999998643
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.90 E-value=1.8e-24 Score=184.99 Aligned_cols=98 Identities=48% Similarity=0.794 Sum_probs=70.5
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG 153 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~ 153 (499)
|..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++|++++..+.+++
T Consensus 1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~ 80 (103)
T 1bq0_A 1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGG 80 (103)
T ss_dssp CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC---
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCC
Confidence 45799999999999999999999999999999999984 77899999999999999999999999999999887542111
Q ss_pred CCCC--ccCCCCccccccCCCC
Q 010831 154 SSAY--TTNPFDLFETFFGPSM 173 (499)
Q Consensus 154 ~~~~--~~~~~diF~~fFg~~~ 173 (499)
+++ ..++.++|++||+..|
T Consensus 81 -~~~~~~~~~~~~f~~~f~~~f 101 (103)
T 1bq0_A 81 -GGFGGGADFSDIFGDVFGDIF 101 (103)
T ss_dssp ----------------------
T ss_pred -CCCCCCCCHHHHHHHHHHhhc
Confidence 111 1245677888887543
No 9
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2.6e-23 Score=178.15 Aligned_cols=103 Identities=34% Similarity=0.697 Sum_probs=95.5
Q ss_pred CcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCC
Q 010831 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE 274 (499)
Q Consensus 195 g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~ 274 (499)
|.|++++|.|+|+|||+|++++|.+++.+.|+.|+|+|.++++.+.+|+.|+|+|++...+ |+|++.++|+.|+|+
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~ 76 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR 76 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence 3578899999999999999999999999999999999999999999999999999886653 678888999999999
Q ss_pred CEEEceeeeeccCceEEEeeeeEEEEe
Q 010831 275 GEVISEYCRKCSGEGRIRLKKNIKVKV 301 (499)
Q Consensus 275 G~~i~~~C~~C~G~G~v~~~k~l~V~I 301 (499)
|++|.++|..|+|.|+++++++|+|+|
T Consensus 77 G~~i~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 77 GSIIISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence 999999999999999999999988875
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=1.1e-22 Score=164.59 Aligned_cols=74 Identities=61% Similarity=1.030 Sum_probs=70.2
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS 148 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~ 148 (499)
|..|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 56799999999999999999999999999999999988889999999999999999999999999999887763
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=7.3e-22 Score=164.03 Aligned_cols=75 Identities=55% Similarity=0.890 Sum_probs=70.2
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST 149 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~ 149 (499)
...|||+||||+++|+.+|||+|||+|+++||||+++.+.+.++|++|++||++|+||.+|+.||++|+.++.++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 357899999999999999999999999999999999888889999999999999999999999999998877643
No 12
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=1.9e-21 Score=161.56 Aligned_cols=74 Identities=50% Similarity=0.864 Sum_probs=69.1
Q ss_pred ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831 72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG 145 (499)
Q Consensus 72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~ 145 (499)
......|||+||||+++|+.+|||+|||+|+++||||+++.+.++++|++|++||++|+||.+|+.||++|+..
T Consensus 12 ~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred hccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 44557899999999999999999999999999999999988889999999999999999999999999998753
No 13
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3.6e-21 Score=156.43 Aligned_cols=71 Identities=61% Similarity=1.022 Sum_probs=66.4
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG 145 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~ 145 (499)
...|||+||||+++|+.+|||+|||+|+++||||+++ .+.+.++|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3578999999999999999999999999999999997 4678999999999999999999999999998754
No 14
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.5e-21 Score=157.01 Aligned_cols=70 Identities=56% Similarity=0.962 Sum_probs=66.8
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG 145 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~ 145 (499)
..|||+||||+++|+.+|||+|||+|+++||||+++.+++.++|++|++||++|+||.+|+.||++|+.+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 5689999999999999999999999999999999988889999999999999999999999999999764
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4e-21 Score=160.79 Aligned_cols=74 Identities=51% Similarity=0.783 Sum_probs=68.1
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST 149 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~ 149 (499)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++|.+++..+
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 4689999999999999999999999999999999975 3678999999999999999999999999998877643
No 16
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=4.9e-21 Score=156.76 Aligned_cols=72 Identities=53% Similarity=0.858 Sum_probs=66.3
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK 147 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~ 147 (499)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||++|+.++.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 46899999999999999999999999999999999753 5788999999999999999999999999976643
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=7e-21 Score=152.50 Aligned_cols=70 Identities=54% Similarity=0.874 Sum_probs=62.4
Q ss_pred cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccccc
Q 010831 73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEA 144 (499)
Q Consensus 73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~ 144 (499)
|....|||+||||+++|+.+|||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||++|++
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 4456799999999999999999999999999999999963 468999999999999999999999999863
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.82 E-value=5.8e-21 Score=162.04 Aligned_cols=73 Identities=52% Similarity=0.870 Sum_probs=64.9
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS 148 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~ 148 (499)
+.|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 36899999999999999999999999999999999753 47899999999999999999999999999887764
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.6e-21 Score=160.50 Aligned_cols=75 Identities=49% Similarity=0.798 Sum_probs=68.1
Q ss_pred ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831 72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS 148 (499)
Q Consensus 72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~ 148 (499)
.+.+..|||+||||+++|+.+|||+|||+|+++||||+++ ...++|++|++||++|+||.+|+.||++|++++..
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 3456789999999999999999999999999999999985 34679999999999999999999999999888764
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=9.4e-21 Score=164.34 Aligned_cols=75 Identities=31% Similarity=0.550 Sum_probs=69.3
Q ss_pred cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831 73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK 147 (499)
Q Consensus 73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~ 147 (499)
.....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||++|.+++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 344689999999999999999999999999999999998 578899999999999999999999999999987653
No 21
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2.6e-20 Score=157.98 Aligned_cols=69 Identities=41% Similarity=0.583 Sum_probs=63.9
Q ss_pred ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831 74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYG 142 (499)
Q Consensus 74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G 142 (499)
....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||++.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 34679999999999999999999999999999999997 4678999999999999999999999999843
No 22
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=2.8e-20 Score=160.57 Aligned_cols=75 Identities=45% Similarity=0.803 Sum_probs=68.9
Q ss_pred cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831 73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK 147 (499)
Q Consensus 73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~ 147 (499)
.....|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 3456799999999999999999999999999999999974 67889999999999999999999999999987654
No 23
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=5.3e-20 Score=154.41 Aligned_cols=70 Identities=31% Similarity=0.563 Sum_probs=64.1
Q ss_pred ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831 74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-------PGATEKFKEISAAYEVLSDDKKRAMYDQYGE 143 (499)
Q Consensus 74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-------~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~ 143 (499)
....|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||+||+||.+|+.||.+..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 346799999999999999999999999999999999863 4578999999999999999999999999753
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=2.1e-19 Score=171.15 Aligned_cols=73 Identities=47% Similarity=0.835 Sum_probs=68.6
Q ss_pred cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831 77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST 149 (499)
Q Consensus 77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~ 149 (499)
.|||+||||+++|+.+|||+|||+|+++||||+++ ++++.++|++|++||++|+||.+|+.||++|+.++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 58999999999999999999999999999999996 57789999999999999999999999999999887643
No 25
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.76 E-value=2.6e-19 Score=154.42 Aligned_cols=72 Identities=38% Similarity=0.631 Sum_probs=66.3
Q ss_pred ccccCcCcchhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831 72 VVCASGDYYATLGVPKSA-SGKEIKAAYRKLARQYHPDVNKE----PGATEKFKEISAAYEVLSDDKKRAMYDQYGE 143 (499)
Q Consensus 72 ~~~~~~d~Y~vLgv~~~a-s~~eIk~ayrkla~~~HPD~~~~----~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~ 143 (499)
......|||+||||+++| +.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||+++.
T Consensus 10 ~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 10 LYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp STTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 444578999999999999 99999999999999999999875 5678999999999999999999999999875
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=8.1e-19 Score=146.26 Aligned_cols=64 Identities=38% Similarity=0.504 Sum_probs=60.6
Q ss_pred ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhh
Q 010831 74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137 (499)
Q Consensus 74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~ 137 (499)
....|||+||||+++|+.+|||+|||+|+++||||+++++++.++|++|++||++|+||.+|+.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 3468999999999999999999999999999999999988999999999999999999999875
No 27
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.71 E-value=1.2e-18 Score=151.37 Aligned_cols=65 Identities=31% Similarity=0.510 Sum_probs=60.7
Q ss_pred CcCcchhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831 76 SGDYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGE 143 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~--~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~ 143 (499)
..|||+||||+++|+. +|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999865 4799999999999999999999999874
No 28
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.71 E-value=6.2e-18 Score=154.71 Aligned_cols=69 Identities=32% Similarity=0.549 Sum_probs=63.0
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-------hHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG-------ATEKFKEISAAYEVLSDDKKRAMYDQYGE 143 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~-------~~~~f~~i~~AY~vLsd~~kR~~YD~~G~ 143 (499)
...|||+||||+++|+.+|||+|||+|+++||||+++... +.++|++|++||++|+||.+|+.||.++.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3579999999999999999999999999999999997542 56899999999999999999999998663
No 29
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.70 E-value=5.5e-18 Score=137.82 Aligned_cols=65 Identities=15% Similarity=0.305 Sum_probs=59.2
Q ss_pred cCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831 77 GDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG 145 (499)
Q Consensus 77 ~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~ 145 (499)
.++|+||||+++ |+.+|||+|||+|+++||||++. +.++|++|++||++|+|+.+|.. |.||.++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 589999999999 99999999999999999999984 46899999999999999999988 5577654
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.68 E-value=3.5e-18 Score=158.39 Aligned_cols=65 Identities=29% Similarity=0.453 Sum_probs=58.1
Q ss_pred CcCcchhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831 76 SGDYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGE 143 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as--~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~ 143 (499)
..|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 6999999999999999999865 3789999999999999999999999985
No 31
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.68 E-value=3.9e-17 Score=156.13 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=70.0
Q ss_pred ccccCCCCCCCCCC-CCCCccccccccccc-cCcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------h
Q 010831 46 ADSCPFGGSKLNSS-NARSSTYRFGRSVVC-ASGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG------A 115 (499)
Q Consensus 46 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~------~ 115 (499)
...||.|+....+. ....-...+...+.. ...|||+||||+++ ++.++||+|||+|+++||||+++... +
T Consensus 10 ~~~Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a 89 (207)
T 3bvo_A 10 YPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFS 89 (207)
T ss_dssp -CBCSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHH
T ss_pred CCCCCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence 45788887542111 111111122333332 36799999999986 79999999999999999999987532 4
Q ss_pred HHHHHHHHHHHhhcchhhhhhhccc
Q 010831 116 TEKFKEISAAYEVLSDDKKRAMYDQ 140 (499)
Q Consensus 116 ~~~f~~i~~AY~vLsd~~kR~~YD~ 140 (499)
.++|++|++||+||+||.+|+.||.
T Consensus 90 ~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 90 EKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5789999999999999999999996
No 32
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.66 E-value=2.4e-17 Score=136.71 Aligned_cols=64 Identities=22% Similarity=0.201 Sum_probs=57.7
Q ss_pred cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhc
Q 010831 75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMY 138 (499)
Q Consensus 75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~Y 138 (499)
...++|+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+|...|..+
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 35789999999999999999999999999999999986 34789999999999999999887443
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.64 E-value=2.1e-17 Score=186.23 Aligned_cols=78 Identities=44% Similarity=0.749 Sum_probs=40.9
Q ss_pred ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831 72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST 149 (499)
Q Consensus 72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~ 149 (499)
......|||+||||+++|+.+|||+|||+||++||||+++ ++.+.++|++|++||++|+||.+|+.||+||++++..+
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 4456789999999999999999999999999999999996 57788999999999999999999999999999888654
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.64 E-value=8.1e-17 Score=150.11 Aligned_cols=63 Identities=21% Similarity=0.412 Sum_probs=59.0
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhc
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMY 138 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~Y 138 (499)
..|||+||||+++|+.+|||+|||+|+++||||+++... ++++|++|++||+||+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 469999999999999999999999999999999997543 788999999999999999999988
No 35
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.63 E-value=1.1e-16 Score=149.13 Aligned_cols=67 Identities=27% Similarity=0.496 Sum_probs=60.6
Q ss_pred CcCcchhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831 76 SGDYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQYG 142 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as--~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~~G 142 (499)
..|||+||||+++++ .++||+|||+|+++||||+++... +.++|+.|++||+||+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 468999999999988 999999999999999999987543 5689999999999999999999999743
No 36
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.62 E-value=1.5e-16 Score=132.59 Aligned_cols=58 Identities=21% Similarity=0.324 Sum_probs=52.0
Q ss_pred ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcch
Q 010831 74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSD 131 (499)
Q Consensus 74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd 131 (499)
+...++|++|||++.|+.+|||+|||++|++||||+|++.. ++++|++|++||+||.+
T Consensus 30 ~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 33358999999999999999999999999999999997532 78899999999999986
No 37
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.61 E-value=2e-16 Score=147.05 Aligned_cols=65 Identities=28% Similarity=0.455 Sum_probs=59.7
Q ss_pred CcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831 78 DYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQYG 142 (499)
Q Consensus 78 d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~~G 142 (499)
|||+||||++++ +.++||+|||+|+++||||+++... +.++|+.|++||+||+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 9999999999999999999987532 4579999999999999999999999864
No 38
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=1.8e-16 Score=135.81 Aligned_cols=61 Identities=13% Similarity=0.262 Sum_probs=53.8
Q ss_pred ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------chHHHHHHHHHHHhhcchhh
Q 010831 72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--------GATEKFKEISAAYEVLSDDK 133 (499)
Q Consensus 72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--------~~~~~f~~i~~AY~vLsd~~ 133 (499)
..+...|||+|||++. |+.+|||+|||+||++||||+|+++ .++++|++|++||++|+|+.
T Consensus 36 ~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 36 ILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4455689999999996 9999999999999999999998642 25789999999999999975
No 39
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.58 E-value=1.8e-15 Score=122.59 Aligned_cols=78 Identities=44% Similarity=0.981 Sum_probs=70.3
Q ss_pred ceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEE
Q 010831 212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI 291 (499)
Q Consensus 212 G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v 291 (499)
|++++|.|++.+.|+.|+|+|..++....+|+.|+|+|+++..+ |+|++..+|+.|+|.|+++.++|..|+|.|++
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~ 76 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV 76 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence 56788999999999999999999888889999999999987643 77887889999999999999999999999988
Q ss_pred Ee
Q 010831 292 RL 293 (499)
Q Consensus 292 ~~ 293 (499)
++
T Consensus 77 ~~ 78 (79)
T 1exk_A 77 ER 78 (79)
T ss_dssp EC
T ss_pred ee
Confidence 54
No 40
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=6.6e-16 Score=122.92 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=52.0
Q ss_pred cCcchhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhh
Q 010831 77 GDYYATLGVPK-SASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA 136 (499)
Q Consensus 77 ~d~Y~vLgv~~-~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~ 136 (499)
.++|+||||++ +|+.+|||+|||+|+++||||++ ++.++|++|++||++|+|+..|+
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhcC
Confidence 58999999999 79999999999999999999997 44679999999999999987663
No 41
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.57 E-value=6.2e-16 Score=144.81 Aligned_cols=66 Identities=24% Similarity=0.477 Sum_probs=59.6
Q ss_pred cCcCcchhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831 75 ASGDYYATL------GVPK-SASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYG 142 (499)
Q Consensus 75 ~~~d~Y~vL------gv~~-~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G 142 (499)
...|||+|| |+++ +|+.++||+|||+|+++||||+++. +.++|++|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 356999999 4665 8999999999999999999999975 6789999999999999999999999843
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.31 E-value=1.7e-12 Score=127.51 Aligned_cols=116 Identities=22% Similarity=0.464 Sum_probs=79.4
Q ss_pred eecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee----------
Q 010831 223 ETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR---------- 283 (499)
Q Consensus 223 ~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~---------- 283 (499)
..|+.|+|+|.... ....+|+.|+|+|+++.. ..+|+.|+|.|.+....-.
T Consensus 55 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~ 124 (248)
T 1nlt_A 55 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKVENERKILEVHVEPGMKD 124 (248)
T ss_dssp CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCEEEEEEEEEEEECTTCCT
T ss_pred ccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc----------CCCCcccCCCceEeeeEEEEEEECCCccC
Confidence 78999999996421 235689999999986521 2689999999987543211
Q ss_pred ----eccCceE---------E---------------------------------------E-eeeeEEEEeCCC--CCCC
Q 010831 284 ----KCSGEGR---------I---------------------------------------R-LKKNIKVKVPPG--VSTG 308 (499)
Q Consensus 284 ----~C~G~G~---------v---------------------------------------~-~~k~l~V~IP~G--v~~G 308 (499)
.-.|+|. + . ..+.++|+||+| +++|
T Consensus 125 G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g 204 (248)
T 1nlt_A 125 GQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPG 204 (248)
T ss_dssp TCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTT
T ss_pred CCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCC
Confidence 2233331 1 1 234699999999 9999
Q ss_pred CEEEEcccCCCCCCCCCCccEEEEEEEEeccc--cccCCcce
Q 010831 309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDL 348 (499)
Q Consensus 309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~--f~R~G~DL 348 (499)
++++|+|+|.+...+...|||||+|+|..+.. +..+..+|
T Consensus 205 ~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 205 MRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp CEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred eEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 99999999998654435799999999998876 66555544
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.97 E-value=2.8e-10 Score=116.53 Aligned_cols=65 Identities=49% Similarity=0.714 Sum_probs=55.9
Q ss_pred CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhccc
Q 010831 76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMYDQ 140 (499)
Q Consensus 76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~YD~ 140 (499)
..++|++||+.+.++.++|+++|+++++++|||+.+.+. ++++|++|++||++|+||++|+.||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 348999999999999999999999999999999987643 78899999999999999999999997
No 44
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.97 E-value=3.8e-10 Score=96.97 Aligned_cols=52 Identities=27% Similarity=0.524 Sum_probs=43.6
Q ss_pred eEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceE
Q 010831 296 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF 349 (499)
Q Consensus 296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~ 349 (499)
.++|+||+|+++|++++|+|+|.+. .+ ..|||||+|+|..+..+..+..+++
T Consensus 39 ~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l 90 (109)
T 3i38_A 39 SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELW 90 (109)
T ss_dssp CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence 4789999999999999999999986 33 7899999999998887765554443
No 45
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.91 E-value=9.7e-10 Score=96.18 Aligned_cols=54 Identities=20% Similarity=0.356 Sum_probs=41.7
Q ss_pred eeEEEEeCCC--CCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccc--cccCCcce
Q 010831 295 KNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDL 348 (499)
Q Consensus 295 k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~--f~R~G~DL 348 (499)
+.++|+||+| +++|++++|+|+|.+..++...|||||+|+|..+.. +..+..++
T Consensus 34 ~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 34 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence 3578999999 999999999999998665446799999999998876 66655544
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.72 E-value=9.5e-09 Score=79.87 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=47.3
Q ss_pred CcchhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchh
Q 010831 78 DYYATLGVPKS---ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD 132 (499)
Q Consensus 78 d~Y~vLgv~~~---as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~ 132 (499)
+-|.||||+++ ++.++|+++||+|....|||+. +......+|++|+++|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence 45899999999 9999999999999999999997 6678889999999999754
No 47
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.57 E-value=5e-08 Score=91.00 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=42.3
Q ss_pred eEEEEeCCCCCCCCEEEEcccCCCCCCC-CCCccEEEEEEEEeccccccCCc
Q 010831 296 NIKVKVPPGVSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDGI 346 (499)
Q Consensus 296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~g-g~~GDL~V~i~v~~h~~f~R~G~ 346 (499)
.++|+||+|+++|++++|+|+|.+...+ +..|||||+|+|..+..+..+..
T Consensus 121 ~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~ 172 (180)
T 2q2g_A 121 NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQK 172 (180)
T ss_dssp EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHH
T ss_pred EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHH
Confidence 5788999999999999999999986533 46799999999998876654443
No 48
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.56 E-value=5.1e-08 Score=91.07 Aligned_cols=51 Identities=25% Similarity=0.262 Sum_probs=42.6
Q ss_pred eEEEEeCCCCCCCCEEEEcccCCCCCC-CCCCccEEEEEEEEeccccccCCc
Q 010831 296 NIKVKVPPGVSTGSILRVVGEGDAGPR-GGPPGDLYVYLDVEEIPGIQRDGI 346 (499)
Q Consensus 296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~-gg~~GDL~V~i~v~~h~~f~R~G~ 346 (499)
.++|+||+|+++|++++|+|+|.+... .+..|||||+|+|..+..++.+..
T Consensus 121 ~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~ 172 (181)
T 3agx_A 121 TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSR 172 (181)
T ss_dssp EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHH
T ss_pred EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHH
Confidence 578899999999999999999998654 356799999999998876664443
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.48 E-value=1.3e-07 Score=96.17 Aligned_cols=74 Identities=18% Similarity=0.294 Sum_probs=53.6
Q ss_pred cCCcceEEEeeeCHHhhhCCCEEEEecc------CC--------eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEE
Q 010831 343 RDGIDLFSTISISYLDAIMGTVVKVKTV------EG--------ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL 408 (499)
Q Consensus 343 R~G~DL~~~~~Isl~eAllG~~~~I~tl------dG--------~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~ 408 (499)
+.|.||..++.|+|.||+.|.+..|.-- .| .++|+||+|++.|++|+|+|+|.|..++ +.+||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~ 216 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW 216 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence 4566777777777777777766555321 22 3589999999999999999999987543 3589999
Q ss_pred EEEEEEcCC
Q 010831 409 FTVKVTIPN 417 (499)
Q Consensus 409 V~~~V~~P~ 417 (499)
|+|+|.-..
T Consensus 217 v~I~v~~h~ 225 (329)
T 3lz8_A 217 LVIHIAPHP 225 (329)
T ss_dssp EEECCCCCS
T ss_pred EEEEEecCC
Confidence 998776543
No 50
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.41 E-value=4.2e-07 Score=83.96 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=59.2
Q ss_pred cceEEEeeeCHHhhhCCCEEEEecc----CC-----eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010831 346 IDLFSTISISYLDAIMGTVVKVKTV----EG-----ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 416 (499)
Q Consensus 346 ~DL~~~~~Isl~eAllG~~~~I~tl----dG-----~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P 416 (499)
.|+.+++.|||.||+.|++.+|.-- .| .++|+||+|+..|++++++|+|-|...+ +..|||||+|+|.-.
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~~h 79 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSH 79 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEECCC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEccC
Confidence 3899999999999999999888632 23 3689999999999999999999865433 357999999999765
Q ss_pred CC
Q 010831 417 NR 418 (499)
Q Consensus 417 ~~ 418 (499)
..
T Consensus 80 ~~ 81 (170)
T 1c3g_A 80 PN 81 (170)
T ss_dssp SS
T ss_pred Cc
Confidence 44
No 51
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=98.12 E-value=7.2e-08 Score=105.84 Aligned_cols=78 Identities=19% Similarity=0.356 Sum_probs=60.3
Q ss_pred EEeeeecccccccceeeeeecceeeecccccCcccccCc---ceeeccCCCCcceEEEE--------eeCCccce-eeee
Q 010831 199 RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---KMRICSTCGGRGQVMRT--------DQTPFGLF-SQVS 266 (499)
Q Consensus 199 ~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~---~~~~C~~C~G~G~v~~~--------~~~~~g~~-~~~~ 266 (499)
.+++.|+|+|+++|.+++++|.+.+.|..|+|+|++++. .+.+|+.|+|+...... ...=.|.| ++..
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 468899999999999999999999999999999999998 68999999999421110 01111333 2346
Q ss_pred eCCCCCCCCE
Q 010831 267 VCPSCGGEGE 276 (499)
Q Consensus 267 ~C~~C~G~G~ 276 (499)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 8999998775
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.72 E-value=7.1e-06 Score=60.96 Aligned_cols=30 Identities=40% Similarity=0.858 Sum_probs=26.6
Q ss_pred eeeCCCCCCCCEEEceeeeeccCceEEEee
Q 010831 265 VSVCPSCGGEGEVISEYCRKCSGEGRIRLK 294 (499)
Q Consensus 265 ~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~ 294 (499)
.++|+.|+|+|++|.++|+.|+|.|++.+.
T Consensus 9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 9 ETTCPNCNGSGREEPEPCPKCLGKGVILTA 38 (53)
T ss_dssp EEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred eccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence 478999999999999999999999988654
No 53
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.64 E-value=2.1e-05 Score=62.96 Aligned_cols=47 Identities=32% Similarity=0.791 Sum_probs=37.5
Q ss_pred cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc--------eeeeeccCceEEE
Q 010831 237 SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--------EYCRKCSGEGRIR 292 (499)
Q Consensus 237 ~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~ 292 (499)
.+..+|+.|+|+|... .....+|+.|+|.|.++. .+|+.|+|.|.+.
T Consensus 9 ~~~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 63 (79)
T 1exk_A 9 PTLEECDVCHGSGAKP---------GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI 63 (79)
T ss_dssp CCEEECGGGTTTSBCS---------SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred ccceECCCCcccccCC---------CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence 4578999999999631 122368999999999874 5999999999764
No 54
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.53 E-value=3.7e-05 Score=65.01 Aligned_cols=47 Identities=34% Similarity=0.887 Sum_probs=37.2
Q ss_pred eeecccccCccccc---C--cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEce
Q 010831 222 LETCEVCTGTGAKM---G--SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISE 280 (499)
Q Consensus 222 ~~~C~~C~GsG~~~---g--~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~ 280 (499)
...|+.|+|+|... + ....+|+.|+|+|+++. .+|+.|+|.|.+...
T Consensus 45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~ 96 (104)
T 2ctt_A 45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQK 96 (104)
T ss_dssp CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECCC
T ss_pred CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEEE
Confidence 46899999999642 1 23578999999998753 689999999998654
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=97.50 E-value=1.4e-05 Score=59.40 Aligned_cols=39 Identities=23% Similarity=0.618 Sum_probs=27.7
Q ss_pred eeecccccCcccccCcceeeccCCCCcceEEEEe-eCCcccee
Q 010831 222 LETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD-QTPFGLFS 263 (499)
Q Consensus 222 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~-~~~~g~~~ 263 (499)
...|+.|+|+|.... .+|+.|+|.|+++..+ ++++|+++
T Consensus 9 ~~~C~~C~GsG~~~~---~~C~~C~G~G~v~~~qG~~~~g~~~ 48 (53)
T 2bx9_A 9 EVACPKCERAGEIEG---TPCPACSGKGVILTAQGYTLLDFIQ 48 (53)
T ss_dssp EEECTTTTTSSEETT---EECTTTTTSSEEECHHHHHHHHHHH
T ss_pred cccCCCCcceeccCC---CCCccCCCCccEEEEecccHHHHHH
Confidence 457888888887753 5788888888877655 55555543
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=97.10 E-value=0.00021 Score=52.97 Aligned_cols=27 Identities=41% Similarity=0.912 Sum_probs=15.7
Q ss_pred eeCCCCCCCCEEEceeeeeccCceEEE
Q 010831 266 SVCPSCGGEGEVISEYCRKCSGEGRIR 292 (499)
Q Consensus 266 ~~C~~C~G~G~~i~~~C~~C~G~G~v~ 292 (499)
.+|+.|+|.|.++..+|+.|+|.|++.
T Consensus 10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEIEGTPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred ccCCCCcceeccCCCCCccCCCCccEE
Confidence 455555555555555666666666554
No 57
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.70 E-value=0.0007 Score=50.15 Aligned_cols=28 Identities=32% Similarity=0.825 Sum_probs=15.7
Q ss_pred eeecccccCcccccCcceeeccCCCCcceEE
Q 010831 222 LETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252 (499)
Q Consensus 222 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~ 252 (499)
..+|+.|+|+|.... ..|+.|+|+|.+.
T Consensus 9 ~~~C~~C~GsG~~i~---~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 9 ETTCPNCNGSGREEP---EPCPKCLGKGVIL 36 (53)
T ss_dssp EEECTTTTTSCEETT---EECTTTTTSSEEE
T ss_pred eccCcCCcccccCCC---CcCCCCCCcEEEE
Confidence 345666666665442 4566666666543
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.89 E-value=0.14 Score=56.25 Aligned_cols=48 Identities=23% Similarity=0.333 Sum_probs=39.0
Q ss_pred ccCcCcchhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhh
Q 010831 74 CASGDYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEV 128 (499)
Q Consensus 74 ~~~~d~Y~vLgv~~~as~--~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~v 128 (499)
....|||.+||++.+... .+|++|||+||+..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 346689999999777655 77999999999976555 4789999999876
No 59
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=70.95 E-value=13 Score=38.31 Aligned_cols=26 Identities=15% Similarity=0.239 Sum_probs=20.7
Q ss_pred CEEEEeccCCeEeEEeCCCCCCCcEEEecc
Q 010831 363 TVVKVKTVEGISELQVPPGTQPGDVLVLAK 392 (499)
Q Consensus 363 ~~~~I~tldG~~~l~ip~gtq~g~~~~l~G 392 (499)
+++.||-|+ +.|+||++.|.+-.|.|
T Consensus 295 a~i~IPEL~----lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 295 CSVEIPELE----FELGMAVLGGKFTTLEG 320 (404)
T ss_dssp CEEEEGGGT----EEECTTTTCSEEEEHHH
T ss_pred eEEEeeeee----EEecCCCCCceEEeHHH
Confidence 467777665 88999999898888876
No 60
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=58.10 E-value=11 Score=36.50 Aligned_cols=35 Identities=23% Similarity=0.534 Sum_probs=19.9
Q ss_pred eeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEE
Q 010831 240 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI 278 (499)
Q Consensus 240 ~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i 278 (499)
-.|..|+-.. .+.+. .+.+..-..|+.|++.|..+
T Consensus 135 f~C~~C~~~~---~v~~~-~~~~~~P~~Cp~C~~~~f~l 169 (279)
T 1ltl_A 135 FECRGCMRHH---AVTQS-TNMITEPSLCSECGGRSFRL 169 (279)
T ss_dssp EEETTTCCEE---EEECS-SSSCCCCSCCTTTCCCCEEE
T ss_pred EEcCCCCCEE---EEEec-CCcccCCCcCCCCCCCCcEE
Confidence 4677776432 22222 23444446799999888544
No 61
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=46.31 E-value=33 Score=33.13 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=24.7
Q ss_pred ceEEEEeeCCccceeeeeeCCCCCCCCEEEc--------eeeeeccCceEE
Q 010831 249 GQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--------EYCRKCSGEGRI 291 (499)
Q Consensus 249 G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v 291 (499)
|.|+++...-+-.....-.|..|+-...+.. ..|+.|.+.|..
T Consensus 118 GiV~r~S~V~p~~~~~~f~C~~C~~~~~v~~~~~~~~~P~~Cp~C~~~~f~ 168 (279)
T 1ltl_A 118 GIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFR 168 (279)
T ss_dssp EEEEEECCCEEEEEEEEEEETTTCCEEEEECSSSSCCCCSCCTTTCCCCEE
T ss_pred EEEEEecceEEEEEEEEEEcCCCCCEEEEEecCCcccCCCcCCCCCCCCcE
Confidence 4454443222222333468999996654332 369999988743
No 62
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=42.57 E-value=26 Score=36.12 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=43.2
Q ss_pred cceeeccCCCCcceEEEE-eeCC-cccee-eeeeCCCCCCCCEEEce-----e---e--eeccCc----eEE-------E
Q 010831 237 SKMRICSTCGGRGQVMRT-DQTP-FGLFS-QVSVCPSCGGEGEVISE-----Y---C--RKCSGE----GRI-------R 292 (499)
Q Consensus 237 ~~~~~C~~C~G~G~v~~~-~~~~-~g~~~-~~~~C~~C~G~G~~i~~-----~---C--~~C~G~----G~v-------~ 292 (499)
+-...|+.|+..|..... ...| |+-+. ++..|+.|+=+-.-|.. + + .++... -+| .
T Consensus 10 ~~~s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyrn~ev~~~g~~~pkG~r~tL~V~~~~DLnr~VvKS~tati 89 (404)
T 2qkd_A 10 SIESLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLTVRSQEDMNREVVKTDSATT 89 (404)
T ss_dssp -CEEECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCEEEEEEEEESSCSSEEEEEEEECSHHHHTCEEEECTTCEE
T ss_pred CccccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCchheeeECcccCCCcEEEEEEECChhcccceEEEcCCcEE
Confidence 346779999887764322 2333 55444 55799999876443321 0 0 011000 001 1
Q ss_pred eeeeEEEEeCCCCCCCCEEEEcc
Q 010831 293 LKKNIKVKVPPGVSTGSILRVVG 315 (499)
Q Consensus 293 ~~k~l~V~IP~Gv~~G~~Irl~G 315 (499)
.--+|.+.||||...|..-.+.|
T Consensus 90 ~IPEL~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 90 RIPELDFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp EEGGGTEEECTTSSCCEEEEHHH
T ss_pred EeeeeeEEecCccCCceEEeHHH
Confidence 12356778899998887666654
No 63
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=37.05 E-value=1.4e+02 Score=28.23 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=20.5
Q ss_pred eeec--cCCCCcceEEEEe--eCCccceeeeeeCCCCCCCCE
Q 010831 239 MRIC--STCGGRGQVMRTD--QTPFGLFSQVSVCPSCGGEGE 276 (499)
Q Consensus 239 ~~~C--~~C~G~G~v~~~~--~~~~g~~~~~~~C~~C~G~G~ 276 (499)
.-.| ..|+. .+... ....+.+..-..|+.|+..|.
T Consensus 141 ~f~C~~~~C~~---~~~~~~~~~~~~~~~~P~~Cp~C~~~~~ 179 (268)
T 2vl6_A 141 TYKHIHPDCMQ---EFEWPEDEEMPEVLEMPTICPKCGKPGQ 179 (268)
T ss_dssp EEEEECTTCCC---EEESSTTSCCCTTCCCCSBCTTTCCBCE
T ss_pred EEECCCCCCCC---EEeeeecccCCCcccCCccCCCCCCCCC
Confidence 3578 88973 22222 012344555578999999873
No 64
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=32.88 E-value=53 Score=25.19 Aligned_cols=53 Identities=21% Similarity=0.365 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHH--HHhhcch-hhhhhhccccc
Q 010831 88 SASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISA--AYEVLSD-DKKRAMYDQYG 142 (499)
Q Consensus 88 ~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~--AY~vLsd-~~kR~~YD~~G 142 (499)
-++.+|.+++|++|.+.++-+-. -.=++..+.|.. -|.+|.+ .+++++|+.|-
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~--~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey~ 66 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSN--ASWEQAMKMIINDPRYSALAKLSEKKQAFNAYK 66 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTT--CCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCC--CCHHHHHHHHccCccccccCCHHHHHHHHHHHH
Confidence 56899999999999998863332 111222223322 4788876 45557777764
No 65
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=31.54 E-value=41 Score=26.21 Aligned_cols=54 Identities=15% Similarity=0.388 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC---cchHHHHHHHHHHHhhcch-hhhhhhcccccc
Q 010831 89 ASGKEIKAAYRKLARQYHPDVNKE---PGATEKFKEISAAYEVLSD-DKKRAMYDQYGE 143 (499)
Q Consensus 89 as~~eIk~ayrkla~~~HPD~~~~---~~~~~~f~~i~~AY~vLsd-~~kR~~YD~~G~ 143 (499)
.-...++.+|+.+.+...|..... ..+..+|..-. +|..+.+ ..++.+|+.|-.
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 345678899999999998887654 24455555543 7999866 566788888753
No 66
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=29.77 E-value=14 Score=36.60 Aligned_cols=51 Identities=27% Similarity=0.683 Sum_probs=0.0
Q ss_pred cccc---------cCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCC-----------------CCCEEE
Q 010831 225 CEVC---------TGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG-----------------GEGEVI 278 (499)
Q Consensus 225 C~~C---------~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~-----------------G~G~~i 278 (499)
||.| ...|...|.+...|..|+-.=...+ ..|+.|+ +...+.
T Consensus 185 CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R------------~~C~~Cg~~~~l~y~~~e~~~~~~~~~~~r 252 (309)
T 2fiy_A 185 CPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVR------------IKCSHCEESKHLAYLSLEHDGQPAEKAVLR 252 (309)
T ss_dssp CTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCT------------TSCSSSCCCSCCEEECCCC-CCCSTTCSEE
T ss_pred CCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecC------------cCCcCCCCCCCeeEEEecCccccCCCcceE
Q ss_pred ceeeeeccC
Q 010831 279 SEYCRKCSG 287 (499)
Q Consensus 279 ~~~C~~C~G 287 (499)
.+.|.+|++
T Consensus 253 ~e~C~~C~~ 261 (309)
T 2fiy_A 253 AETCPSCQG 261 (309)
T ss_dssp EEEETTTTE
T ss_pred EEEcccccc
No 67
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.86 E-value=34 Score=27.37 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=22.3
Q ss_pred EEEcCCCCCHHHHHHHHHHHhhcCC
Q 010831 412 KVTIPNRISAKERELLEELASLRNT 436 (499)
Q Consensus 412 ~V~~P~~Ls~~q~~lL~~l~~~~~~ 436 (499)
.++||..|+..||.++-++|+-.+=
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~GL 59 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEHGL 59 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTTE
T ss_pred EEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 6899999999999999999986653
No 68
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=27.43 E-value=22 Score=28.17 Aligned_cols=57 Identities=16% Similarity=0.387 Sum_probs=28.0
Q ss_pred eeecccccCcccccCcc--eeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee
Q 010831 222 LETCEVCTGTGAKMGSK--MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR 283 (499)
Q Consensus 222 ~~~C~~C~GsG~~~g~~--~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~ 283 (499)
.+.|..|...|-....= ...|..|...|.+.+....+ .....|-.|+..|.+ ..-|+
T Consensus 5 ~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p----~~~~~CYnCG~~GH~-~rdC~ 63 (83)
T 3nyb_B 5 KVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLP----FHTIYCYNCGGKGHF-GDDCK 63 (83)
T ss_dssp --CCSSSCCSSSCGGGCGGGTCCCCBC-----------------CCCBCSSSSCBSSC-GGGCS
T ss_pred cCCCCCCCCCCCccccCCCcccccccccCCcccccccCC----CCCCeecccCCCCcC-cccCC
Confidence 45699998888554322 33688888888764432211 123679999998874 33344
No 69
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=26.84 E-value=73 Score=26.11 Aligned_cols=51 Identities=22% Similarity=0.561 Sum_probs=29.5
Q ss_pred eecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc------eeeeeccC
Q 010831 223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS------EYCRKCSG 287 (499)
Q Consensus 223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~------~~C~~C~G 287 (499)
..||.|+-.=...+ ....|..|+.. |.....||.|+-.=++.+ --|..|+|
T Consensus 33 ~~CP~Cq~eL~~~g-~~~hC~~C~~~-------------f~~~a~CPdC~q~LevLkACGAvdYFC~~chg 89 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-GHARCRSCGEF-------------IEMKALCPDCHQPLQVLKACGAVDYFCQHGHG 89 (101)
T ss_dssp CBCSSSCSBEEEET-TEEEETTTCCE-------------EEEEEECTTTCSBCEEEEETTEEEEEETTTTE
T ss_pred ccCccCCCcceecC-CEEECccccch-------------hhccccCcchhhHHHHHHHhcCcchhhccCCc
Confidence 46888875422222 23468888752 344467888887766553 25665554
No 70
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=26.35 E-value=7.2 Score=41.56 Aligned_cols=66 Identities=21% Similarity=0.451 Sum_probs=37.7
Q ss_pred ecccccCcccccCc----ceeeccCCCCcceEEEE---eeCCccceeeeeeCCCCCCCCEEEceeeeeccCce
Q 010831 224 TCEVCTGTGAKMGS----KMRICSTCGGRGQVMRT---DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEG 289 (499)
Q Consensus 224 ~C~~C~GsG~~~g~----~~~~C~~C~G~G~v~~~---~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G 289 (499)
.|..||+.+..... ....|-.||+.-..+.. ...+-..-.....|..|+..-..-...|..||...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEEPKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSCCCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcCcCchhhhhcCCC
Confidence 69999988653211 24479999975321100 00000000013689999976655567899998754
No 71
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=25.32 E-value=6.9 Score=41.74 Aligned_cols=66 Identities=18% Similarity=0.403 Sum_probs=36.7
Q ss_pred ecccccCcccccC-----cceeeccCCCCcceEEEEe----eCCcccee--eeeeCCCCCCCCEEEceeeeeccCce
Q 010831 224 TCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTD----QTPFGLFS--QVSVCPSCGGEGEVISEYCRKCSGEG 289 (499)
Q Consensus 224 ~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~----~~~~g~~~--~~~~C~~C~G~G~~i~~~C~~C~G~G 289 (499)
.|..||+...... .....|-.||......... ....-... ....|..|+..=......|..||...
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~~~~~C~~CH~~~ 89 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSFD 89 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSCBCCGGGGTCCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccCCCccccccChhh
Confidence 6999998764322 1346799999753211000 00000000 13579999976444557899998753
No 72
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=25.12 E-value=99 Score=26.40 Aligned_cols=43 Identities=19% Similarity=0.352 Sum_probs=31.0
Q ss_pred eEEeCCCCCCCcEEEeccCCCCCCCC--------CCCCCcEEEEEEEEcCC
Q 010831 375 ELQVPPGTQPGDVLVLAKKGAPKLNK--------PSIRGDHLFTVKVTIPN 417 (499)
Q Consensus 375 ~l~ip~gtq~g~~~~l~G~GmP~~~~--------~~~rGDL~V~~~V~~P~ 417 (499)
.-.||.|.++|+.++|.|.=.+...+ .....|+-+||++.|.+
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 45688899999999999864333221 11246999999999964
No 73
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=24.24 E-value=67 Score=30.66 Aligned_cols=13 Identities=46% Similarity=0.958 Sum_probs=9.5
Q ss_pred ceeeccCCCCcce
Q 010831 238 KMRICSTCGGRGQ 250 (499)
Q Consensus 238 ~~~~C~~C~G~G~ 250 (499)
.+..|+.|+..|.
T Consensus 167 ~P~~Cp~C~~~~~ 179 (268)
T 2vl6_A 167 MPTICPKCGKPGQ 179 (268)
T ss_dssp CCSBCTTTCCBCE
T ss_pred CCccCCCCCCCCC
Confidence 3677888888763
No 74
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=22.00 E-value=77 Score=23.51 Aligned_cols=49 Identities=16% Similarity=0.321 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcchHHHHHHH-H--HHHhhcch-hh-hhhhccccc
Q 010831 92 KEIKAAYRKLARQYHPDVNKEPGATEKFKEI-S--AAYEVLSD-DK-KRAMYDQYG 142 (499)
Q Consensus 92 ~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i-~--~AY~vLsd-~~-kR~~YD~~G 142 (499)
+|..+||.+|.+...=|.+ -.=++..+.| . .-|-+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~--wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDST--WSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSS--CCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCC--CcHHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 5788999999988754433 2334556666 3 36999997 76 557888763
No 75
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.01 E-value=1.2e+02 Score=22.22 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccc
Q 010831 95 KAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQ 140 (499)
Q Consensus 95 k~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~ 140 (499)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++.++....|.
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4556777778888865 45778889999999998877655553
Done!