BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010834
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/498 (85%), Positives = 466/498 (93%), Gaps = 1/498 (0%)
Query: 1 MDTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ 60
MDTGGNSL SG DGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQ+MQ
Sbjct: 1 MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 61 VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT 120
VLKPFPAR+RDLCRFHADDYVSFLRSITPETQQDQ+RQLKRFNVGEDCPVFDGL+SFCQT
Sbjct: 61 VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 121 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
YAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121 YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGI 240
VDIDIHHGDGVEEAFY TDRVMTVSFHKFGDYFPGTG I+DIGY GK+YSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGI 240
Query: 241 DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
DDESYH LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
Sbjct: 241 DDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360
VPLLLLGGGGYTIRNVARCWCYETGVALGVEV+DKMP+HEYYEYFGPDYTLHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMEN 360
Query: 361 KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV 420
KNSRQ+LEEIRN LL LSKLQHAPSV FQERPPD+E PE DEDQEDGD+RWDPDSDMDV
Sbjct: 361 KNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKRWDPDSDMDV 420
Query: 421 DDERKSLPNRVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPS 480
DD+RK +P+RVKREAVEP+ KD++GLKG+ E+ +G ++ D+S STKV ++ + ++E S
Sbjct: 421 DDDRKPIPSRVKREAVEPDTKDKDGLKGIMERGKGCEVEVDESGSTKVTGVNPVGVEEAS 480
Query: 481 IKVEQENMSK-ASDHMYP 497
+K+E+E +K ++ +P
Sbjct: 481 VKMEEEGTNKGGAEQAFP 498
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/501 (77%), Positives = 433/501 (86%), Gaps = 19/501 (3%)
Query: 3 TGGNSLPS-GTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQV 61
+GGNSLPS G DG KR+VCYFYDP+VGNYYYGQGHPMKPHRIRMTH+LLA YGLL MQV
Sbjct: 8 SGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQV 67
Query: 62 LKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTY 121
+P PARER+LCRFHA++Y++FLRS+TPETQQDQ+R LKRFNVGE+CPV DGL+SFCQTY
Sbjct: 68 YRPNPARERELCRFHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTY 127
Query: 122 AGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 181
AG SVGGAVK NHG DIAINW+GGLHHAKKCEASGFCYVNDIVLAILELLK HERVLYV
Sbjct: 128 AGASVGGAVKFNHGH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYV 186
Query: 182 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIG+SKGK+YSLNVPLDDGID
Sbjct: 187 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGID 246
Query: 242 DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 301
DESY LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV++MRSFNV
Sbjct: 247 DESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNV 306
Query: 302 PLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENK 361
PLLLLGGGGYTIRNVARCWCYETGVALG E +DKMP +EYYEYFGPDYTLHVAPSNMENK
Sbjct: 307 PLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAPSNMENK 366
Query: 362 NSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVD 421
N+RQ L++IR+K LSKL+HAPSV FQER PD+E+PE DEDQ+D DER DPDSDM+VD
Sbjct: 367 NTRQQLDDIRSK----LSKLRHAPSVHFQERVPDTEIPEQDEDQDDPDERHDPDSDMEVD 422
Query: 422 D--------ERKSLPNRVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTK---VLD 470
D R L ++KRE E + ++G + +A + RG + +A+D S+K D
Sbjct: 423 DHKAVEESSRRSILGIKIKREFGENATRVQDGGR-VASEHRGLEPMAEDIGSSKQAPQAD 481
Query: 471 MSSMPIDEPS-IKVEQENMSK 490
S+M IDEPS +K E E+ +K
Sbjct: 482 ASAMAIDEPSNVKNEPESSTK 502
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/433 (67%), Positives = 348/433 (80%), Gaps = 13/433 (3%)
Query: 2 DTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQV 61
D G SLPSG DG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H+L+ HY L + +++
Sbjct: 4 DESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEI 63
Query: 62 LKPFPARERDLCRFHADDYVSFLRSITPETQQD--QLRQLKRFNVGEDCPVFDGLFSFCQ 119
+P A D+ RFH+ +YV FL S++PE+ D R L+RFNVGEDCPVFDGLF FC+
Sbjct: 64 SRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCR 123
Query: 120 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 179
AGGS+G AVKLN DIAINW GGLHHAKK EASGFCYVNDIVL ILELLK +RVL
Sbjct: 124 ASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVL 183
Query: 180 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDG 239
Y+DID+HHGDGVEEAFYTTDRVMTVSFHKFGD+FPGTG IRD+G KGK+Y+LNVPL+DG
Sbjct: 184 YIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDG 243
Query: 240 IDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 299
+DDES+ LF+P+I KVMEV++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F+RS+
Sbjct: 244 MDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSY 303
Query: 300 NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNME 359
NVPL++LGGGGYTIRNVARCWCYET VA+GVE D+K+P +EY+EYFGPDYTLHV PS ME
Sbjct: 304 NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPME 363
Query: 360 NKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP----- 414
N N+ + +E IRN LLE LS L HAPSVQFQ PP + + DE ++D + R P
Sbjct: 364 NLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRV--LDEPEDDMETRPKPRIWSG 421
Query: 415 ----DSDMDVDDE 423
+SD D DD+
Sbjct: 422 TATYESDSDDDDK 434
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 598 bits (1541), Expect = e-170, Method: Compositional matrix adjust.
Identities = 267/385 (69%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ AGGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
+I KVME F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQPIPEDA 388
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 265/385 (68%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA 388
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 265/385 (68%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA 388
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 265/385 (68%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA 388
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 593 bits (1530), Expect = e-169, Method: Compositional matrix adjust.
Identities = 264/385 (68%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA 388
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 593 bits (1530), Expect = e-169, Method: Compositional matrix adjust.
Identities = 264/385 (68%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DIA+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P D+
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDA 388
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 260/385 (67%), Positives = 323/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
+ G K+KVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A +
Sbjct: 4 SQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEE 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DI++NW+GGLHHAKK EASGFCYVNDIVLAILELLK H+RV+Y+DIDIHHGDGV
Sbjct: 124 LNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVM+VSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMSVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCGADSLSGDRLGCFNL+IKGHA+CV+F+++FN+P+L+LGGGGY
Sbjct: 244 VMTKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q P DS
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIPEDS 388
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 257/404 (63%), Positives = 328/404 (81%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K++VCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ +F
Sbjct: 6 KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+D+YV FLRSI P+ + +Q++RFNVGEDCPVFDGL+ FCQ AGGSV AVKLN
Sbjct: 66 HSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQ 125
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
+I INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVEEAF
Sbjct: 126 ASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAF 185
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N+PL DG+DD++Y +F PII K
Sbjct: 186 YTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISK 245
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VME F+P AVVLQCGADSL+GDRLGCFNL++KGH +CV+F++ +N+P L++GGGGYTIRN
Sbjct: 246 VMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRN 305
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
V+RCW YET VAL VE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+N+L
Sbjct: 306 VSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLF 365
Query: 376 EYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMD 419
E L L HAP VQ Q P D+ E+D++ + + P SD D
Sbjct: 366 ENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKD 409
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 571 bits (1471), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/414 (64%), Positives = 337/414 (81%), Gaps = 2/414 (0%)
Query: 11 GTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARER 70
+ G K++VCY+YD +VGNYYYGQGHPMKPHRIRMTH L+ +YGL + M++ +P A
Sbjct: 2 ASTGTKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVME 61
Query: 71 DLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAV 130
++ ++H+DDYV FLR+I P+ + +Q++RFNVGEDCPVFDGL+ FCQ +GGSV GAV
Sbjct: 62 EMTKYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAV 121
Query: 131 KLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDG 190
KLN DIAINWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDG
Sbjct: 122 KLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDG 181
Query: 191 VEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 250
VEEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N PL DGIDDESY +FK
Sbjct: 182 VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFK 241
Query: 251 PIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGG 310
PI+ KVME+++P A+ LQCGADSLSGDRLGCFNL++KGHA+CV+FM+ +N+PLLL+GGGG
Sbjct: 242 PIMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGG 301
Query: 311 YTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEI 370
YTIRNVARCW YET ALGVE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + L++I
Sbjct: 302 YTIRNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKI 361
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDER 424
+ +L E + + HAP VQ Q P D+ +P+ D D ED E D + D+R
Sbjct: 362 KTRLYENMRMIPHAPGVQMQPIPEDA-IPD-DSDAEDEAENPDKRISIMAQDKR 413
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/399 (66%), Positives = 332/399 (83%), Gaps = 1/399 (0%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDER 411
L E L L HAP VQ Q P D+ ++ DED ED D+R
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 568 bits (1464), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/399 (66%), Positives = 331/399 (82%), Gaps = 1/399 (0%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ ++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDER 411
L E L L HAP VQ Q P D+ ++ DED ED D+R
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 263/385 (68%), Positives = 322/385 (83%)
Query: 12 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERD 71
T G K+KVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A D
Sbjct: 4 TLGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAED 63
Query: 72 LCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVK 131
+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ AGGSV AVK
Sbjct: 64 MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVK 123
Query: 132 LNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGV 191
LN DI++NW+GGLHHAKK EASGFCYVNDIVLAILELLK H+RV+Y+DIDIHHGDGV
Sbjct: 124 LNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGV 183
Query: 192 EEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
EEAFYTTDRVMTVSFHK+G+YFPGTGD+RDIG KGK+Y++N L DGIDDESY +FKP
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKP 243
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGY 311
++ KVME+F+P AVVLQCGADSLSGDRLGCFNL+IKGHA+CV+F+++FN+PLL+LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGY 303
Query: 312 TIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIR 371
TIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+
Sbjct: 304 TIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 372 NKLLEYLSKLQHAPSVQFQERPPDS 396
+L E L L HAP VQ Q DS
Sbjct: 364 QRLFENLRMLPHAPGVQMQAVAEDS 388
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust.
Identities = 261/446 (58%), Positives = 340/446 (76%), Gaps = 18/446 (4%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
RKV YFYD EVGN+YYG HPMKPHR+RMTH L+ +YG+ + MQ+ +P A E +L FH
Sbjct: 4 RKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTNFH 63
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
+DDY++FL+ +TP+ D +QL +FNV EDCPVFDG+++FCQ +GGS+G AVK+N
Sbjct: 64 SDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNSKE 123
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
D+AINWAGGLHHAKK EASGFCY NDIVL+ILELLK HERVLY+DIDIHHGDGVEEAFY
Sbjct: 124 SDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEAFY 183
Query: 197 TTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKV 256
TTDRVMTVSFHK+GDYFPGTGD++DIG KGK+YSLN PL DGIDDESY +F+PII V
Sbjct: 184 TTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSV 243
Query: 257 MEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNV 316
M+ +RPGAVV+QCGADSL+GDRLGCFNL+++GHA+C++F++SFNVPL++LGGGGYTI+NV
Sbjct: 244 MDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNV 303
Query: 317 ARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLE 376
ARCW YET + + E+ D++P ++Y EY+GP+Y LH+ P+NMEN+N++ LE+++ +LLE
Sbjct: 304 ARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLE 363
Query: 377 YLSKLQHAPSVQFQERPPDS--------------ELPEADEDQEDGDERWDPDSDMDVDD 422
L L HAP+ + PPDS + EAD D++ SD D +D
Sbjct: 364 NLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEADRDKK--VHHQGELSDSDEED 421
Query: 423 ERKSLPNRVKREAVEPEQKDREGLKG 448
R++ N + EA ++++ +
Sbjct: 422 GRRNYSNGL--EATSTSRRNQVSISA 445
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/399 (65%), Positives = 326/399 (81%), Gaps = 1/399 (0%)
Query: 14 GVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLC 73
G K+KVCY+YD ++GNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 74 RFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
++H+D+Y+ FLRSI P+ + +Q++RFNVGEDCPVFDGLF FCQ GGSV GAVKLN
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEE 193
D+A+NWAGGLHHAKK EASGFCYVNDIVLAILELLK H+RVLY+DIDIHHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 194 AFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
AFYTTDRVMTVS + FPGTGD+RDIG KGK+Y++N P+ DGIDDESY +FKPII
Sbjct: 187 AFYTTDRVMTVSEVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
KVME+++P AVVLQCGADSLSGDRLGCFNL++KGHA+CV+ +++FN+PLL+LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
RNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 374 LLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDER 411
L E L L HAP VQ Q P D+ ++ DED ED D+R
Sbjct: 367 LFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 405
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/443 (58%), Positives = 326/443 (73%), Gaps = 14/443 (3%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KR+V Y+YD +GNYYYGQGH MKPHRIRMTH L+ +YGL +N+++ +PFPA D+ RF
Sbjct: 12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+D+Y++FL+S P+ + +Q+ +FNVGEDCP+FDGL+ FCQ +GGS+ A KLN
Sbjct: 72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
DIAINW GGLHHAKK EASGFCY NDIVL ILELLK H+RVLYVDID+HHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMTVSFHK+GD+FPGTGD++DIG KGK YS+NVPL DGI D SY +FKPI+ K
Sbjct: 192 YTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTK 251
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
VME F P AVVLQCGADSL+GDRLG FNL++KGH EC +F RS+NVPL+++GGGGYT RN
Sbjct: 252 VMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRN 311
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VARCW YET +A+ EV +++P ++Y+EYFGP+Y LH+ SN N+NS +L +++ ++
Sbjct: 312 VARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVI 371
Query: 376 EYLSKLQHAPSVQFQERPPDSELPEADE----DQEDGDERWDP---------DSDMDVDD 422
L +L PSVQ + P D+ D+ DQ + D+R P D D D
Sbjct: 372 ANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDF-YDG 430
Query: 423 ERKSLPNRVKREAVEPEQKDREG 445
ER+ R + +A Q + EG
Sbjct: 431 EREGDDRRNESDAKRAAQFESEG 453
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 246/428 (57%), Positives = 315/428 (73%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MTNRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LNH
Sbjct: 61 FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV++ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDYF-PGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+YF PGTGD+ ++G G++Y LNVPL DGIDD+SY LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV+F++SF +PLL+LGGGGYT+
Sbjct: 241 KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW +ET + L + D++P EY+EYF PD+TLH + +EN+NSRQ LE+IR
Sbjct: 301 RNVARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERPPDS--------------------ELPEADEDQEDGDERW 412
+ E L L HAPSVQ + P D PEA + DGD
Sbjct: 361 TVFENLKMLNHAPSVQIHDVPSDMLNYERNDEPDPDERGAEENYTRPEAANEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 246/428 (57%), Positives = 320/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y+LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 NQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERW 412
+ E L L HAPSVQ + P PD E PEA + DGD
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYSRPEAANEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 533 bits (1372), Expect = e-150, Method: Compositional matrix adjust.
Identities = 247/428 (57%), Positives = 319/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLYVDIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 KQVIDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERW 412
+ E L L HAPSVQ + P PD E PEA + DGD
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPSDILSYERTDEPDPEERGSEDNYSRPEASNEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 317/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERPPD--------------------SELPEADEDQEDGDERW 412
+ E L L HAPSVQ + P D PEA + DGD
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 240/399 (60%), Positives = 310/399 (77%), Gaps = 3/399 (0%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDER 411
+ E L L HAPSVQ + P D L D+ D +ER
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPADL-LTYDRTDEADAEER 398
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 317/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERPPD--------------------SELPEADEDQEDGDERW 412
+ E L L HAPSVQ + P D PEA + DGD
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 314/428 (73%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MTNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG DCPVF GLF FC Y G S+ GA +LNH
Sbjct: 61 FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNH 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV++ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV+F++ F +PLL+LGGGGYT+
Sbjct: 241 KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW +ET + + + D++P EY+EYF PD+TLH + +EN+NSRQ LE+IR
Sbjct: 301 RNVARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERPPD--------------------SELPEADEDQEDGDERW 412
+ E L L HAPSVQ ++ P D PEA + DGD
Sbjct: 361 TVFENLKMLNHAPSVQIRDVPSDLLSYERPDEADPEERGSEENFSRPEAANEFYDGDHDH 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/428 (57%), Positives = 319/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA +LN+
Sbjct: 61 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
+CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQF------------------QERPPDSEL--PEADEDQEDGDERW 412
+ E L L HAPSVQ +ER P+ PEA + DGD
Sbjct: 361 TIFENLKMLNHAPSVQIRDVPAGLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 246/428 (57%), Positives = 317/428 (74%), Gaps = 22/428 (5%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+ + V YFYDP+VGN++YG GHPMKPHR+ +TH+L+ HYGL + M V KP+ A + D+CR
Sbjct: 1 MAKTVAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCR 60
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH++DY+ FL+ ++P Q + L FNVG+DCPVF GLF FC Y G S+ GA LN+
Sbjct: 61 FHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNN 120
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
CDIAINWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DIDIHHGDGV+EA
Sbjct: 121 KNCDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY TDRVMTVSFHK+G+Y FPGTGD+ ++G G++Y LNVPL DGIDD+SY +LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVI 240
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V++ ++P +VLQCGADSL DRLGCFNLSI+GH ECV++++SFN+PLL+LGGGGYT+
Sbjct: 241 KQVIDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTV 300
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRN 372
RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR
Sbjct: 301 RNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 373 KLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERW 412
+ E L L HAPSVQ + P PD E PEA + DGD
Sbjct: 361 TVFESLKMLNHAPSVQIHDVPSDILNYERTDEPDPEERGGEDNYSRPEASNEFYDGDHDN 420
Query: 413 DPDSDMDV 420
D +SD+++
Sbjct: 421 DKESDVEI 428
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/412 (59%), Positives = 319/412 (77%), Gaps = 4/412 (0%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K K+ YFYD +VG+ Y+G HPMKPHR+ MTH L+ YGL M+V +P A ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H+ DYV FL+ I PE Q ++ R+N+GEDCPVF+ LF FCQ YAGG++ A +LN+
Sbjct: 64 HSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNK 123
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
LCDIAINWAGGLHHAKKC+ASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 124 LCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAF 183
Query: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y TDRVMTVSFHKFGD +FPGTGD+++IG +GKFY++NVPL DGIDD S++ LF+ II
Sbjct: 184 YFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIIS 243
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
KV+E+++PGA+VLQCGADSL+ DRLGCFNLSI GHAECVKF++ FN+PLL+ GGGGYT
Sbjct: 244 KVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKE 303
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
NVARCW ETG+ L E+ +++P+++Y +YF PD++L + ++EN N++ + I+ ++
Sbjct: 304 NVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQI 363
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---DSDMDVDDE 423
LE L +QHAPSVQ QE PPD +P+ DED+++ D R D D + DDE
Sbjct: 364 LENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDE 415
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 230/396 (58%), Positives = 308/396 (77%), Gaps = 1/396 (0%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
KR+V YFYD +VGNY YG GHPMKPHRIRM H+L+ +YGL + M++ + PA ++++C+F
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H D+Y+ FL +TP+ + R+ +FNVG+DCPVFDGL+ +C GGS+ GA +LN G
Sbjct: 78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
CD+A+N+AGGLHHAKK EASGFCY+NDIVL I+ELL+ H RVLY+DID+HHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197
Query: 196 YTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
YTTDRVMT SFHK+G++FPGTG++RDIG GK Y++NVPL DGIDD +Y +F+P+I K
Sbjct: 198 YTTDRVMTCSFHKYGEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKK 257
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
+ME ++P AVVLQCG DSLSGDRLGCFNLS++GHA CV +++SF +P++++GGGGYT+RN
Sbjct: 258 IMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRN 317
Query: 316 VARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLL 375
VAR WC+ETG+ V +D +P +EYYEY+GPDY L V PSNM N N+ + L+++ +
Sbjct: 318 VARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIF 377
Query: 376 EYLSKLQHAPSVQFQERPPDSE-LPEADEDQEDGDE 410
L ++APSVQ P D+E L + +ED + +
Sbjct: 378 ANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEAKD 413
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/401 (60%), Positives = 304/401 (75%), Gaps = 6/401 (1%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K+KV YFYD +VGNY+YG HPMKPHR+RM H L+ +Y L + + V+ P A D+ R
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 76 HADDYVSFLRSITPETQQD-QLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
H D+Y+ FL +TP+T + Q QLK FNVG+DCPVFDGL+ FC AGGS+G A +LN
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQPHQLK-FNVGDDCPVFDGLYEFCSISAGGSIGAAQELNS 123
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
G +IAINWAGGLHHAKK EASGFCYVNDI LA LELLK H+RVLY+DID+HHGDGVEE
Sbjct: 124 GNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEF 183
Query: 195 FYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
FYTTDRVMT SFHKFG+YFPGTG I+D G GK Y++NVPL DGIDDESY +FKP+I
Sbjct: 184 FYTTDRVMTCSFHKFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
+M+ FRP AV+LQCG DSL+GDRLGCFNLS+KGH+ CV F++SFN+P++ +GGGGYT+R
Sbjct: 244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
NVAR W YETG+ G E+D+ +P ++Y +Y+GPDY L+V +NMEN N+RQ L+ I +++
Sbjct: 304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEI 363
Query: 375 LEYLSKLQHAPSVQFQERPPDSELPEADED----QEDGDER 411
+E L L APSVQ + P D A++ +E DER
Sbjct: 364 IENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDER 404
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/403 (60%), Positives = 309/403 (76%), Gaps = 7/403 (1%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K +VCYF+D +VGNY+YG HPMKPHR+ +T+ L+ +YGL + M + K PA D+ +F
Sbjct: 12 KTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLKF 71
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H++DYV FL +TPE ++ + +KRF++GEDCPVF GL+ +C Y+GGS+ GA+KLNH
Sbjct: 72 HSEDYVDFLERVTPE-NINEWKDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHR 130
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
+ DIAINW+GGLHHA+K EASGFCYVNDIVLAILELLK H RVLY+DID+HHGDGV+EAF
Sbjct: 131 MYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEAF 190
Query: 196 YTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y TDRVMTVSFHKFG D+FPGTGDI +IG GK YS+NVPL DGIDD++Y +FKP+I
Sbjct: 191 YLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQ 250
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
VM+ +RP +VLQCGADSL DRLGCFNL+IKGHAECV+F++SFN+P L+LGGGGYT+R
Sbjct: 251 GVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVR 310
Query: 315 NVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTL----HVAPSNMENKNSRQLLEEI 370
NVARCW YET V + EV++++P ++Y +++ PD+ L P EN N++ LE +
Sbjct: 311 NVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQLIPDYTGLPFKYENANTKSYLESL 370
Query: 371 RNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWD 413
R K+LE L LQ APSVQ Q+ PPD + D D ED E D
Sbjct: 371 RIKILENLRILQWAPSVQIQDVPPDIMPIDFDRD-EDSKENMD 412
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/413 (55%), Positives = 292/413 (70%), Gaps = 12/413 (2%)
Query: 8 LPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPA 67
+ S DG KR+V YFY+P +G+YYYG P KP RIR+TH L+ Y L ++M++ P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 68 RERDLCRFHADDYVSFLRSITPETQQDQ----LRQLKRFNVGEDC--PVFDGLFSFCQTY 121
D +FH+ +Y++FL+S+TPET D LKRFNV D PVF LF +C+ Y
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 122 AGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 181
AGGS+ A KLN DIAINWAGG+HH KK +ASGF YVND+VLAILELLK +RVLY+
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 182 DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID 241
+I HGD VEEAF TDRVMTVSFHK GD TGDI D G KG++YSLN PL DG+D
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 242 DESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 301
D S LF P+I + ME++ P +VLQCGADSL+GD G FNLSIKGH +C++++RSFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 302 PLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENK 361
PL++LGGGGYT+ NVARCWCYET +A+G ++D+ +P ++Y +YF PDY LH+ P+N +N
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNL 356
Query: 362 NSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP 414
N+R + +R LL LS + HAPSV FQ+ P S+ EA E D ++R DP
Sbjct: 357 NTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAE--VDMEKRNDP 407
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/408 (53%), Positives = 288/408 (70%), Gaps = 3/408 (0%)
Query: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRF 75
K++V Y D +VGNY+YG HPMKPHRI +T+ L+ YGL M V P A ++ F
Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84
Query: 76 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
H +DY+ FL+ +TP+ + + ++FN+G+DCPVFDG + F Q AG S+ + KL G
Sbjct: 85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
DIAINW+GGLHHAK+ EASGFCYVNDIVLAIL +L+ RVLY+DIDIHHGDGV++AF
Sbjct: 145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAF 204
Query: 196 YTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y +DRV+TVSFHK+ GD+FP TG+ + G GK+++LNVPL+DGI DE Y LFK II
Sbjct: 205 YESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIE 264
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
+ F+P A+VLQCGADSL DRLG FNLSI H ECV+F RSFN+P+L++GGGGYT+R
Sbjct: 265 PTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLR 324
Query: 315 NVARCWCYETGVALGVEVDDKMPQHE-YYEYFGPDYTLH-VAPSNMENKNSRQLLEEIRN 372
NVAR WCYET + + ++ ++P+ YYE+F PDYTLH + +ENKN+ + LE++R
Sbjct: 325 NVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTTKIENKNTPKALEDLRI 384
Query: 373 KLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV 420
+ LE L L APSVQ Q+ PPD +ED+ DE D D+ V
Sbjct: 385 RALEQLRYLGGAPSVQMQQIPPDLTGHLEEEDERLNDEYLDKAVDVRV 432
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/386 (53%), Positives = 264/386 (68%), Gaps = 6/386 (1%)
Query: 9 PSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPAR 68
P G D KR V Y+Y +VG+++YGQ HPMKP R+ + + L+ Y + + M V++
Sbjct: 21 PDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLD 80
Query: 69 ERDLCRFHADDYVSFLRSITPE---TQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGS 125
D+ FH +DYV+FL+++TP+ T D + L++FN+GEDCP+F GL+ +C YAGGS
Sbjct: 81 AADISVFHTEDYVNFLQTVTPKLGLTMPDDV--LRQFNIGEDCPIFAGLWDYCTLYAGGS 138
Query: 126 VGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDI 185
V GA +LNH + DI INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DIDI
Sbjct: 139 VEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDI 198
Query: 186 HHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESY 245
HHGDGV+EAF +DRVMTVSFH+FG YFPG+G I D G GK++++NVPL I DE Y
Sbjct: 199 HHGDGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPY 258
Query: 246 HYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLL 305
LF+ +I V E F P A+VLQCG+DSL DRLG F LS HA VK+++S PL++
Sbjct: 259 LKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMV 318
Query: 306 LGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYE-YFGPDYTLHVAPSNMENKNSR 364
LGGGGYT+RNVARCW ETGV LG+ +DD++P Y YF P M + NS
Sbjct: 319 LGGGGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPRLLRPNLVPKMNDANSA 378
Query: 365 QLLEEIRNKLLEYLSKLQHAPSVQFQ 390
L I + L L ++ APSVQ Q
Sbjct: 379 AYLASIEKETLACLRMIRGAPSVQMQ 404
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 288/407 (70%), Gaps = 5/407 (1%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
+V Y ++ +V +Y+YG HPMKP R+ +T L++ YGL + M + + A +L +FH+
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 78 DDYVSFLRSITPETQQDQLR-QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
+DYV+FL ++PE R L+ FN+G+DCP+F L+ + Y G S+ KL +
Sbjct: 87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFY 196
DIAINW+GGLHHAKK SGFCYVNDIVL+IL LL+ H R+LY+DID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 197 TTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGK 255
TTDRV T+SFHK+ G++FPGTGD+ +IG KGK ++LNVPL+DGIDD+SY LFK I+
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266
Query: 256 VMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRN 315
++ F+P +V QCGADSL DRLGCFNL+IK H ECVKF++SF +P+L++GGGGYT RN
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326
Query: 316 VARCWCYETGVALGVEVDDKMPQH-EYYEYFGPDYTLHVAPSNM-ENKNSRQLLEEIRNK 373
V+R W YETG+ V + + +P+ + + FGPDY+L+ ++ ENKNS++LLE+IR +
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIR 386
Query: 374 LLEYLSKLQHAPSVQF-QERPPDSELPEADEDQEDGDERWDPDSDMD 419
LE + LQ APSV+ E P ++ E+++ + + +++ D
Sbjct: 387 CLENIRYLQGAPSVRMDAECIPTQDISALTEEEDKIIQEMNEETEAD 433
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L ++ E D L
Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETL 86
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
+ + +G DCP+ +G++ + G ++ A +L G IAINW GG HHAKK EASGFC
Sbjct: 87 E-YGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFC 145
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGD 218
Y+ND VL IL+L ++ +RVLYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD
Sbjct: 146 YLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 205
Query: 219 IRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR 278
+ DIG KG++YS+NVPL DGI DE Y+ + + ++ +V F P AVVLQ GAD+++GD
Sbjct: 206 VSDIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDP 265
Query: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
+ FN++ +G +C+K++ + +P L+LGGGGY + N ARCW Y T + +G + ++P
Sbjct: 266 MCSFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPD 325
Query: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKL 381
HE++ +GPDY L V PS ++N Q ++EI + +L ++
Sbjct: 326 HEFFTEYGPDYVLEVTPSCRPDRNDSQKVQEILQSIKGHLKQV 368
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 222/336 (66%), Gaps = 2/336 (0%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSI 94
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
+ + +G DCP +G+F + G ++ A L G+C +AINW+GG HHAKK EASGFC
Sbjct: 95 E-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGD 218
Y+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 219 IRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR 278
+ D+G KG++YS+NVP+ DGI DE Y+ + + ++ +V + F P AVVLQ GAD+++GD
Sbjct: 214 VSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDP 273
Query: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
+ FN++ G +C+K++ + + L+LGGGGY + N ARCW Y TGV LG + ++P
Sbjct: 274 MCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
HE++ +GPDY L + PS ++N +++I N +
Sbjct: 334 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYI 369
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 224/336 (66%), Gaps = 2/336 (0%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
+ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFC
Sbjct: 95 E-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGD 218
Y+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 219 IRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR 278
+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V + F P AVVLQ GAD+++GD
Sbjct: 214 MSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP 273
Query: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
+ FN++ G +C+K++ + + L+LGGGGY + N ARCW Y TGV LG + ++P
Sbjct: 274 MCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
HE++ +GPDY L + PS ++N +++I N +
Sbjct: 334 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYI 369
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 224/336 (66%), Gaps = 2/336 (0%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
+ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFC
Sbjct: 95 E-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGD 218
Y+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 219 IRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR 278
+ D+G KG++YS+NVP+ DGI DE Y+++ + ++ +V + F P AVVLQ GAD+++GD
Sbjct: 214 MSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP 273
Query: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
+ FN++ G +C+K++ + + L+LGGGGY + N ARCW Y TGV LG + ++P
Sbjct: 274 MCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
HE++ +GPDY L + PS ++N +++I N +
Sbjct: 334 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYI 369
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 221/336 (65%), Gaps = 2/336 (0%)
Query: 40 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQL 99
P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ + D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 100 KRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
+ + +G DCP +G+F + G ++ A L G+C +AINW+GG HHAKK EASGFC
Sbjct: 95 E-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGD 218
Y+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 219 IRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDR 278
+ D+G KG++YS+NVP+ D I DE Y+++ + ++ +V F P AVVLQ GAD+++GD
Sbjct: 214 VSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP 273
Query: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQ 338
+ FN++ G +C+K++ + + L+LGGGGY + N ARCW Y TGV LG + ++P
Sbjct: 274 MCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKL 374
HE++ +GPDY L + PS ++N +++I N +
Sbjct: 334 HEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYI 369
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 232/361 (64%), Gaps = 8/361 (2%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMK--PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
R V Y Y PE Y + P+R M H+L+ YGLL+ M+V+KP A ++
Sbjct: 15 RSVVYVYSPE----YIQTCDSLSKVPNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAV 70
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNH 134
FH D Y+ L I+ + D Q F +G DCPV +G+F + G ++ A L
Sbjct: 71 FHTDSYLQHLHKISQDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLD 129
Query: 135 GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEA 194
G CD+AINWAGG HHAKK EASG CYVND VL IL+L ++++RVLYVD+D+HHGDGVE+A
Sbjct: 130 GKCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDA 189
Query: 195 FYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
F T +VMTVS HKF +FPGTGD+ D G KG++Y++NVP +DG+ D+ Y F ++
Sbjct: 190 FSFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVM 249
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTI 313
+V +F P AVV+Q GAD+++GD + FN++ G A+C+ ++ + +P LLLGGGGY +
Sbjct: 250 QEVKALFNPEAVVMQLGADTMAGDPMCSFNMTPVGVAKCLTYILGWELPTLLLGGGGYNL 309
Query: 314 RNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNK 373
N ARCW Y TG LG + ++P HE++ +GPDY+L ++PS ++N Q LE + +
Sbjct: 310 ANTARCWTYLTGTVLGQTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNESQHLERVIST 369
Query: 374 L 374
+
Sbjct: 370 I 370
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 305 bits (780), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 213/323 (65%), Gaps = 2/323 (0%)
Query: 60 QVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQ 119
+V+KP A ++ FH D Y+ L ++ E D L+ + +G DCP+ +G++ +
Sbjct: 3 RVVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETLE-YGLGYDCPITEGIYDYAA 61
Query: 120 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 179
G ++ A +L G IA+NW GG HHAKK EASGFCY+ND VL IL+L ++ +RVL
Sbjct: 62 AVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVL 121
Query: 180 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDD 238
YVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ DIG KG++YS+NVPL D
Sbjct: 122 YVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINVPLQD 181
Query: 239 GIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRS 298
GI D+ Y+ + + ++ +V F P AVVLQ GAD+++GD + FN++ +G +C+K++
Sbjct: 182 GIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMCSFNMTPEGIGKCLKYVLQ 241
Query: 299 FNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNM 358
+ +P L+LGGGGY + N ARCW Y T + +G + ++P HE++ +GPDY L + PS
Sbjct: 242 WQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPDHEFFTEYGPDYVLEITPSCR 301
Query: 359 ENKNSRQLLEEIRNKLLEYLSKL 381
++N Q ++EI + L ++
Sbjct: 302 PDRNDTQKVQEILQSIKGNLKRV 324
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 159/329 (48%), Gaps = 15/329 (4%)
Query: 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFH 76
R + Y P Y + Q HP R+ +T+ LL + ++ P A E +L H
Sbjct: 2 RDSVFIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVH 61
Query: 77 ADDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHG 135
DDY+ ++ + + + + +G ED PVF G+ GG++ A + G
Sbjct: 62 TDDYIQAVK--LAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSG 119
Query: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-RVLYVDIDIHHGDGVEEA 194
A N GGLHH + ASGFC ND +AI + K++ RVLY+D D HHGDGV+
Sbjct: 120 QALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFT 179
Query: 195 FYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPII 253
FY V T+S H+ G Y FPGTG I++ G KG YS N+PLD +D+S+ ++
Sbjct: 180 FYDNPDVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAA 239
Query: 254 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLLGG 308
+V F P ++ Q GAD+ D L + +I + E + + + +GG
Sbjct: 240 SEVAAYFEPDVIISQNGADAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCGGKWIAVGG 299
Query: 309 GGYTI-----RNVARCWCYETGVALGVEV 332
GGY I R AR W G+ G E+
Sbjct: 300 GGYDIWRVVPRAWARIWLEMKGIDPGHEI 328
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 134/231 (58%), Gaps = 7/231 (3%)
Query: 98 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASG 157
+ K++N+ DCP+F L +CQ G ++ L+ I INW GG HHA K ASG
Sbjct: 160 ETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASG 219
Query: 158 FCYVNDIVLAILELLK-QHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPG 215
FCY+ND+VL I L K + ++ YVD D+HHGDGVE+AF + ++ T+S H + +FPG
Sbjct: 220 FCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPG 279
Query: 216 TGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLS 275
TG + D S+ +N+PL G DD + I+ ++E P A++++CG D L
Sbjct: 280 TGSLSD---SRKDKNVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLL 336
Query: 276 GDRLGCFNLSIKGHAE-CVKFMRSF-NVPLLLLGGGGYTIRNVARCWCYET 324
GDR + L+I+G + + M+S+ + LLGGGGY ++R + Y T
Sbjct: 337 GDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 41 HRIRMTHALLAHYGLLQNMQVLKPFP-ARERDLCRFHADDYVSFL 84
+ ++T++L+ Y LLQ+ + FP AR+ DL FH+ Y+ +L
Sbjct: 25 QKSQLTYSLINAYDLLQHFDEVLTFPYARKDDLLEFHSKSYIDYL 69
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 159/317 (50%), Gaps = 11/317 (3%)
Query: 15 VKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCR 74
+++ Y Y E+ Y + HP R+++T LL G L+ ++ P A + +L
Sbjct: 4 MQQTTGYVYANELLQYRFSNKHPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDELSL 63
Query: 75 FHADDYVSFLRSITPETQQDQLRQLKRFNV-GEDCPVFDGLFSFCQTYAGGSVGGAVKLN 133
HA DY+ +R + + + K++ + GED F + GG++ A ++
Sbjct: 64 IHAYDYIQAIRHASHGILSE--NEAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIM 121
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVE 192
G + GGLHH+ A+GFC ND+ + I L++++ +RVL +D D HHGDG +
Sbjct: 122 SGTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDGTQ 181
Query: 193 EAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
+FYT D+ + S H+ G + FPG+G + G KG Y++N+PL+ +D+S+ +FK
Sbjct: 182 WSFYTNDQALIYSIHETGKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQ 241
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLL 306
I V+ F+P +V G D D L + ++ E ++S +++
Sbjct: 242 TIEPVVASFKPDIIVSVHGVDVHYLDPLTHMSCTLNTLYEIPYIVKSLADTYTQGKVIMF 301
Query: 307 GGGGYTIRNVA-RCWCY 322
GGGGY I V R W +
Sbjct: 302 GGGGYNIWKVVPRAWSH 318
>sp|Q9LXN8|HDA17_ARATH Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1
Length = 158
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 100/146 (68%), Gaps = 3/146 (2%)
Query: 281 CFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHE 340
F++ GHAECVKF++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++ +++
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 341 YYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE 400
Y +YF PD++L + ++EN N++ + I+ ++LE L +QHAPSVQ QE PPD +P+
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 121
Query: 401 ADEDQEDGDERWDP---DSDMDVDDE 423
DED+++ D R D D + DDE
Sbjct: 122 FDEDEQNPDVRVDQRSRDKQIQRDDE 147
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 11/314 (3%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y Y ++ Y + HP R+++T LL + LL Q+++P A + +L H
Sbjct: 7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHK 66
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
DYV ++ + + + K++ + E+ F + T GG++ A + G
Sbjct: 67 YDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGK 124
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAF 195
+ GGLHHA+ ASGFC NDI + L K++ +RVL +D D HHGDG + +F
Sbjct: 125 VLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSF 184
Query: 196 YTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y + V T S H+ G + FPG+G + G G +++NVPL+ +D S+ FK +
Sbjct: 185 YADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVE 244
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLLGGG 309
V++ F+P ++ G D D L N ++ E F++ N +++ GGG
Sbjct: 245 PVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGG 304
Query: 310 GYTI-RNVARCWCY 322
GY I R V R W +
Sbjct: 305 GYNIWRVVPRAWSH 318
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 11/314 (3%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y Y ++ Y + HP R+++T LL + LL Q+++P A + +L H
Sbjct: 7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHK 66
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL 136
DYV ++ + + + K++ + E+ F + T GG++ A + G
Sbjct: 67 YDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGK 124
Query: 137 CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAF 195
+ GGLHHA+ ASGFC NDI + L K++ +RVL +D D HHGDG + +F
Sbjct: 125 VLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSF 184
Query: 196 YTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIG 254
Y + V T S H+ G + FPG+G + G G +++NVPL+ +D S+ FK +
Sbjct: 185 YADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVE 244
Query: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLLGGG 309
V++ F+P ++ G D D L N ++ E F++ N +++ GGG
Sbjct: 245 PVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGG 304
Query: 310 GYTI-RNVARCWCY 322
GY I R V R W +
Sbjct: 305 GYNIWRVVPRAWSH 318
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 17/317 (5%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y Y ++ Y + HP R+++T LL + LL Q+++P A + +L H
Sbjct: 7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHK 66
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN---- 133
DYV ++ + + + K++ + ++ +G F ++ VGGA+ L
Sbjct: 67 YDYVEAIKHASHGIISED--EAKKYGLNDEE---NGQFKHMHRHSATIVGGALTLADLIM 121
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVE 192
G + GGLHHA+ ASGFC NDI + L K++ +RVL +D D HHGDG +
Sbjct: 122 SGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQ 181
Query: 193 EAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
+FY + V T S H+ G + FPG+G + G G +++NVPL+ +D S+ FK
Sbjct: 182 WSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKL 241
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLL 306
+ V++ F+P ++ G D D L N ++ E F++ N +++
Sbjct: 242 TVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMF 301
Query: 307 GGGGYTI-RNVARCWCY 322
GGGGY I R V R W +
Sbjct: 302 GGGGYNIWRVVPRAWSH 318
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 152/317 (47%), Gaps = 17/317 (5%)
Query: 18 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHA 77
K Y Y ++ Y + HP R+++T LL + LL Q+++P A + +L H
Sbjct: 7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHK 66
Query: 78 DDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN---- 133
DYV ++ + + N E+ G F ++ VGGA+ L
Sbjct: 67 YDYVEAIKHASHGIISEDEAMKYGLNDEEN-----GQFKHMHRHSATIVGGALTLADLIM 121
Query: 134 HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVE 192
G + GGLHHA+ ASGFC NDI + L K++ +RVL +D D HHGDG +
Sbjct: 122 SGKALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQ 181
Query: 193 EAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKP 251
+FY + V T S H+ G + FPG+G + G G +++NVPL+ +D S+ FK
Sbjct: 182 WSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKL 241
Query: 252 IIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLL 306
+ V++ F+P ++ G D D L N ++ E F++ N +++
Sbjct: 242 TVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADTYTNGKIIMF 301
Query: 307 GGGGYTI-RNVARCWCY 322
GGGGY I R V R W +
Sbjct: 302 GGGGYNIWRVVPRAWSH 318
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,327,787
Number of Sequences: 539616
Number of extensions: 10147467
Number of successful extensions: 40058
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 38869
Number of HSP's gapped (non-prelim): 809
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)