Query 010838
Match_columns 499
No_of_seqs 238 out of 1352
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 15:19:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 7.5E-45 2.6E-49 383.2 20.7 291 1-295 55-399 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2E-42 6.9E-47 363.1 23.4 288 1-299 56-397 (403)
3 1j71_A Candidapepsin, aspartic 100.0 5.8E-41 2E-45 343.3 25.5 244 22-302 77-331 (334)
4 1t6e_X Xylanase inhibitor; two 100.0 3.5E-41 1.2E-45 351.2 22.7 288 3-296 43-374 (381)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.3E-40 4.4E-45 343.1 26.6 253 20-299 77-346 (351)
6 2qzx_A Candidapepsin-5; aspart 100.0 1.1E-40 3.9E-45 342.0 25.4 251 22-304 77-340 (342)
7 3pvk_A Candidapepsin-2; hydrol 100.0 1.3E-40 4.5E-45 340.9 25.5 252 22-304 77-340 (342)
8 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-40 4.6E-45 340.7 25.0 250 22-304 71-338 (339)
9 2x0b_A Renin; hydrolase-hormon 100.0 6.9E-41 2.4E-45 349.7 22.1 247 21-295 118-383 (383)
10 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-40 4.5E-45 346.0 21.7 244 22-295 112-370 (370)
11 3cms_A Chymosin B; hydrolase, 100.0 4.8E-40 1.6E-44 335.0 23.1 244 21-295 69-323 (323)
12 4aa9_A Chymosin; hydrolase, as 100.0 7.2E-40 2.5E-44 332.7 23.5 243 22-295 67-320 (320)
13 1dpj_A Proteinase A; proteinas 100.0 2.8E-39 9.7E-44 329.9 27.1 244 21-295 68-329 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 9.4E-40 3.2E-44 337.6 23.7 252 22-299 75-359 (361)
15 3k1w_A Renin; protease, altern 100.0 7E-40 2.4E-44 335.4 21.8 247 21-295 75-340 (341)
16 2apr_A Rhizopuspepsin; hydrola 100.0 2.1E-39 7.2E-44 330.7 25.2 243 21-294 69-323 (325)
17 1am5_A Pepsin, acid proteinase 100.0 1.6E-39 5.5E-44 331.1 24.0 242 22-295 68-324 (324)
18 1miq_A Plasmepsin; aspartic pr 100.0 1.8E-39 6.2E-44 338.0 22.5 242 22-295 118-374 (375)
19 1htr_B Gastricsin; aspartyl pr 100.0 2.6E-39 9.1E-44 330.2 22.6 245 22-295 68-329 (329)
20 3c9x_A Trichoderma reesei aspa 100.0 4E-39 1.4E-43 329.2 22.9 245 21-294 71-329 (329)
21 1oew_A Endothiapepsin; hydrola 100.0 2.8E-39 9.6E-44 330.3 20.5 244 22-294 71-329 (329)
22 1yg9_A Aspartic protease BLA G 100.0 5.3E-39 1.8E-43 328.5 21.6 245 22-295 72-329 (330)
23 2ewy_A Beta-secretase 2; BACE2 100.0 7.5E-39 2.6E-43 333.2 22.4 270 22-299 65-359 (383)
24 1qdm_A Prophytepsin; aspartic 100.0 8.1E-39 2.8E-43 343.0 22.6 264 21-294 108-477 (478)
25 3vf3_A Beta-secretase 1; struc 100.0 4.6E-38 1.6E-42 329.4 26.4 290 3-301 51-380 (402)
26 3lpj_A Beta-secretase 1; alzhe 100.0 2.5E-38 8.4E-43 337.1 24.7 299 3-309 97-435 (455)
27 2qp8_A Beta-secretase 1; BACE1 100.0 4.3E-38 1.5E-42 329.1 25.2 269 22-299 73-371 (395)
28 1ibq_A Aspergillopepsin; aspar 100.0 2.1E-38 7.4E-43 323.3 22.3 245 21-294 66-324 (325)
29 3qvc_A Histo-aspartic protease 100.0 2E-38 6.9E-43 337.5 20.5 243 21-295 192-449 (451)
30 1wkr_A Polyporopepsin; hydrola 100.0 7.1E-38 2.4E-42 321.0 23.0 266 3-299 35-337 (340)
31 1izd_A Aspartic proteinase; su 100.0 8.9E-38 3E-42 318.6 22.3 242 21-294 67-322 (323)
32 1bxo_A Protein (penicillopepsi 100.0 8.4E-38 2.9E-42 318.6 21.2 242 21-294 67-322 (323)
33 2bju_A Plasmepsin II; aspartic 100.0 7.5E-38 2.6E-42 333.1 18.5 242 22-295 194-450 (453)
34 1lya_B Cathepsin D; lysosomal 100.0 2.7E-36 9.3E-41 294.6 23.3 222 52-295 3-241 (241)
35 1b5f_A Protein (cardosin A); h 99.9 2.1E-25 7.2E-30 218.0 14.9 161 22-190 70-237 (239)
36 1b5f_B Protein (cardosin A); h 99.6 6.3E-16 2.2E-20 127.6 8.0 72 223-295 11-87 (87)
37 1lya_A Cathepsin D; lysosomal 96.1 0.0043 1.5E-07 51.5 4.0 26 22-48 71-96 (97)
38 2i1a_A DNA damage-inducible pr 94.3 0.14 4.9E-06 45.0 8.4 27 266-292 108-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 94.2 0.088 3E-06 47.0 6.8 113 136-294 22-135 (148)
40 1iv3_A 2-C-methyl-D-erythritol 38.8 50 0.0017 29.3 5.7 50 341-392 87-136 (152)
41 3re3_A 2-C-methyl-D-erythritol 38.6 50 0.0017 29.6 5.8 49 341-391 93-141 (162)
42 2pmp_A 2-C-methyl-D-erythritol 37.8 52 0.0018 29.4 5.7 49 341-391 90-138 (160)
43 1gx1_A 2-C-methyl-D-erythritol 37.6 54 0.0018 29.3 5.8 48 341-390 88-135 (160)
44 1t0a_A 2C-methyl-D-erythritol 37.3 55 0.0019 29.2 5.8 49 341-391 89-137 (159)
45 2ki9_A Cannabinoid receptor 2; 34.6 5.2 0.00018 25.6 -1.0 15 483-497 6-20 (33)
46 3f0d_A 2-C-methyl-D-erythritol 33.4 66 0.0022 29.4 5.7 49 341-391 110-158 (183)
47 1lya_A Cathepsin D; lysosomal 30.2 44 0.0015 26.8 3.8 16 165-180 29-44 (97)
48 3rnm_E Lipoamide acyltransfera 26.5 25 0.00085 26.0 1.4 23 362-384 7-29 (58)
49 2kvr_A Ubiquitin carboxyl-term 25.6 34 0.0012 29.4 2.3 36 362-397 65-100 (130)
50 3b6n_A 2-C-methyl-D-erythritol 23.1 90 0.0031 28.5 4.7 50 341-392 115-164 (187)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7.5e-45 Score=383.19 Aligned_cols=291 Identities=22% Similarity=0.403 Sum_probs=229.2
Q ss_pred CCCcccccCCCC-CC------CC---CC------CCCCceEEEEe-CCCceEEEEEEEEEEEeCCcC------cccccce
Q 010838 1 MSNTYQALKCNP-DC------NC---DN------DRKECIYERRY-AEMSTSSGVLGVDVISFGNES------ELVPQRA 57 (499)
Q Consensus 1 ~SsTy~~v~C~~-~C------~C---~~------~~~~C~y~i~Y-~dGss~sG~l~~DtVsigg~s------~iti~~~ 57 (499)
+||||++++|.+ .| +| .+ .++.|.|.+.| .|+++++|++++|+|+|++.. .++++++
T Consensus 55 ~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~ 134 (413)
T 3vla_A 55 VSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134 (413)
T ss_dssp CCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEE
T ss_pred CCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCE
Confidence 589999999996 25 13 21 14579999999 588889999999999997311 2577899
Q ss_pred EEEEEEeecCCCCCCCCceEEeeCCCCCChHHHHHHcCCCCCcEEEeecCCCCCCceEEECCCCCCC--------C-cee
Q 010838 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP--------D-MVF 128 (499)
Q Consensus 58 ~FG~~~~~s~~~~~~~~DGILGLG~~~~S~~~qL~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~--------~-~~~ 128 (499)
.|||++++........+|||||||++.+|++.||.++++++++||+||.+....+|.|+|||.|..+ . +.+
T Consensus 135 ~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~ 214 (413)
T 3vla_A 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTY 214 (413)
T ss_dssp EEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEE
T ss_pred EEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeE
Confidence 9999988743222356899999999999999999999989999999999865668999999998631 2 555
Q ss_pred eeeCCCC------------CCceEEEEeEEEEcCEEeecCCceec----CCCcEEEccCCceeeecHHHHHHHHHHHHHh
Q 010838 129 SHSDPFR------------SPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192 (499)
Q Consensus 129 ~~~~~~~------------~~~w~V~l~~I~Vgg~~l~l~~~~f~----~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~ 192 (499)
+++.... ..+|.|+|++|.||++.+.+++..|. ++..+||||||++++||+++|++|.++|.++
T Consensus 215 tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 215 TPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp EECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred eecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 5543321 26999999999999999988766553 4578999999999999999999999999987
Q ss_pred hc--ccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcC-CeEEEeCCCCceEEeeecCCcEEEEEEEcCC---C
Q 010838 193 TH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNSD---S 266 (499)
Q Consensus 193 v~--~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~-g~~i~I~p~dYi~~~~~~~~~~Cl~ii~~~~---~ 266 (499)
+. .+++..+ ..+++.||+.....-...+..+|+|+|+|++ +++|.|++++|+++..+ +.+|++++.... +
T Consensus 295 ~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~ 370 (413)
T 3vla_A 295 SAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRT 370 (413)
T ss_dssp HHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSS
T ss_pred hcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCccc
Confidence 64 2333221 2346789865322211223589999999954 49999999999998653 679998877652 6
Q ss_pred CeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 267 TTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 267 ~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
.||||+.|||++|+|||++++|||||++.
T Consensus 371 ~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 371 SIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred ceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 89999999999999999999999999853
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2e-42 Score=363.08 Aligned_cols=288 Identities=21% Similarity=0.424 Sum_probs=217.7
Q ss_pred CCCcccccCCCC-CC---------CCCCC------CCCceEEEEeC-CCceEEEEEEEEEEEeCCcC--c------cccc
Q 010838 1 MSNTYQALKCNP-DC---------NCDND------RKECIYERRYA-EMSTSSGVLGVDVISFGNES--E------LVPQ 55 (499)
Q Consensus 1 ~SsTy~~v~C~~-~C---------~C~~~------~~~C~y~i~Y~-dGss~sG~l~~DtVsigg~s--~------iti~ 55 (499)
+||||++++|.+ .| .|.++ ++.|+|.+.|+ |++.++|.+++|+|+|++.. . ++++
T Consensus 56 ~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~ 135 (403)
T 3aup_A 56 SSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP 135 (403)
T ss_dssp CCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEE
T ss_pred CCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCcccccccccccc
Confidence 589999999985 24 13222 36899999998 78899999999999998721 1 5678
Q ss_pred ceEEEEEEeecCC-CCCCCCceEEeeCCCCCChHHHHHHcCCCCCcEEEeecCCCCCCceEEECCCCCCCC----c----
Q 010838 56 RAVFGCENLETGD-LYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPD----M---- 126 (499)
Q Consensus 56 ~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S~~~qL~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~~----~---- 126 (499)
++.|||+..++.. +....+|||||||++.++++.||.+..+.+++||+||.+....+|.|+||| |+.+. +
T Consensus 136 ~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~ 214 (403)
T 3aup_A 136 QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIF 214 (403)
T ss_dssp EEEEEEECGGGGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTT
T ss_pred CEEEECCcccccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccccccc
Confidence 9999999887544 444578999999999999999997665556999999998655689999999 76432 1
Q ss_pred -eeeeeCCCC--CCceEEEEeEEEEcCEEe-ecCCceec----CCCcEEEccCCceeeecHHHHHHHHHHHHHhhccccc
Q 010838 127 -VFSHSDPFR--SPYYNIELKELRVAGKPL-KVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKR 198 (499)
Q Consensus 127 -~~~~~~~~~--~~~w~V~l~~I~Vgg~~l-~l~~~~f~----~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~ 198 (499)
.+.|.+... ..+|.|.+++|.|+++.+ .++...+. +...+||||||++++||+++|++|+++|.+++.....
T Consensus 215 ~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~ 294 (403)
T 3aup_A 215 HDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ 294 (403)
T ss_dssp TTEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGE
T ss_pred CceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccc
Confidence 344433332 379999999999999988 66654441 3456999999999999999999999999877654333
Q ss_pred ccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCC--eEEEeCCCCceEEeeecCCcEEEEEEEcCC---CCeeecHH
Q 010838 199 IRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG--QKLTLSPENYLFRHMKVSGAYCLGIFQNSD---STTLLGGI 273 (499)
Q Consensus 199 ~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g--~~i~I~p~dYi~~~~~~~~~~Cl~ii~~~~---~~~ILG~~ 273 (499)
.... .....|+ +|+.+ +.+|+|+|+|+++ ++|.|++++|+++..+ +..|+++..... +.||||+.
T Consensus 295 ~~~~--~~~~~c~-----~c~~~-~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~ 364 (403)
T 3aup_A 295 VKSV--APFGLCF-----NSNKI-NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGAR 364 (403)
T ss_dssp ECCC--TTCSCEE-----CGGGC-CCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHH
T ss_pred cCCC--CCCCceE-----ECCCc-CcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChH
Confidence 3221 1234565 34443 3799999999555 6999999999988642 679996655442 58999999
Q ss_pred hhheEEEEEECCCCEEEE-------EeccCCcc
Q 010838 274 VVRNTLVTYDRGNDKVGF-------WKTNCSEL 299 (499)
Q Consensus 274 FLr~~yvVFD~en~rIGF-------A~s~C~~~ 299 (499)
|||++|+|||++++|||| ++++|...
T Consensus 365 fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~ 397 (403)
T 3aup_A 365 QLEENLVVFDLARSRVGFSTSSLHSHGVKCADL 397 (403)
T ss_dssp HHTTSCEEEETTTTEEEEESSCGGGGTCCGGGS
T ss_pred HhcCeEEEEECCCCEEEEecccccccCCCcccc
Confidence 999999999999999999 66677764
No 3
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=5.8e-41 Score=343.29 Aligned_cols=244 Identities=19% Similarity=0.328 Sum_probs=205.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCCC--------ChHHHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLVE 93 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~--------S~~~qL~~ 93 (499)
.|+|.+.|++|+.++|.+++|+|++++ ++++++.|||+.... ..|||||||++.+ +++++|++
T Consensus 77 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~~~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~~ 147 (334)
T 1j71_A 77 NQDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTS------VDQGIMGIGFTADEAGYNLYDNVPVTLKK 147 (334)
T ss_dssp EEEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGSSTTCCCCCHHHHHHH
T ss_pred CCceEEEECCCCEEEEEEEEEEEEECC---EEEccEEEEEEEecC------CCccEEEEcCCcccCccccCCcHHHHHHH
Confidence 799999999998889999999999998 578899999998774 4799999999764 79999999
Q ss_pred cCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccC
Q 010838 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSG 171 (499)
+|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. +..++||||
T Consensus 148 qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~~iiDSG 220 (334)
T 1j71_A 148 QGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-------NADVVLDSG 220 (334)
T ss_dssp TTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECTT
T ss_pred CCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC-------CccEEEeCC
Confidence 99998 89999999765568999999999987 3455565555677999999999999998753 247999999
Q ss_pred CceeeecHHHHHHHHHHHHHhhcccccccCCCCCcc-ccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEee
Q 010838 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYD-DICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (499)
Q Consensus 172 Ts~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~ 250 (499)
|++++||++++++|.+++.+... .....|. .+|+ .+|+|+|+|.+|.+++|++++|+++..
T Consensus 221 Tt~~~lP~~~~~~l~~~~~~~~~------~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T 1j71_A 221 TTITYFSQSTADKFARIVGATWD------SRNEIYRLPSCD------------LSGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSSSC------------CCSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred CCcEecCHHHHHHHHHHcCCccc------CCCceEEEEcCC------------CCCceEEEEcCCcEEEECHHHheeecC
Confidence 99999999999999999965442 1112334 5662 489999999778999999999999864
Q ss_pred ecCCcEEEEEEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCccccc
Q 010838 251 KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRR 302 (499)
Q Consensus 251 ~~~~~~Cl~ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~~~~ 302 (499)
+ +..|++.+... +.||||++|||++|+|||++++|||||+++|....+.
T Consensus 283 ~--~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i 331 (334)
T 1j71_A 283 D--SSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDI 331 (334)
T ss_dssp S--SSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCE
T ss_pred C--CCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccce
Confidence 3 44599888765 5799999999999999999999999999999865443
No 4
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.5e-41 Score=351.21 Aligned_cols=288 Identities=17% Similarity=0.321 Sum_probs=216.3
Q ss_pred CcccccCCCC-CC---------CCCC-------CCCCc-eEEEEeCCCceEEEEEEEEEEEeCCcC-cccccce----EE
Q 010838 3 NTYQALKCNP-DC---------NCDN-------DRKEC-IYERRYAEMSTSSGVLGVDVISFGNES-ELVPQRA----VF 59 (499)
Q Consensus 3 sTy~~v~C~~-~C---------~C~~-------~~~~C-~y~i~Y~dGss~sG~l~~DtVsigg~s-~iti~~~----~F 59 (499)
.+|++++|++ .| .|.. .+..| .|.++|+||+.++|.+++|+|++++.. .++++++ .|
T Consensus 43 ~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~F 122 (381)
T 1t6e_X 43 QPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLA 122 (381)
T ss_dssp CCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred CCCCccCCCCchhccccCCCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEe
Confidence 4577788874 24 3653 23578 599999999888999999999998521 1344444 67
Q ss_pred EEEEeecCCCCCCCCceEEeeCCCCCChHHHHHHcCCCCCcEEEeecCCCCCCceEEECCCCCC---C--CceeeeeCCC
Q 010838 60 GCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPP---P--DMVFSHSDPF 134 (499)
Q Consensus 60 G~~~~~s~~~~~~~~DGILGLG~~~~S~~~qL~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s---~--~~~~~~~~~~ 134 (499)
||+.++........+|||||||++.+|++.||.++++++++||+||.+. .+|+|+|||.|.. + .+.++++...
T Consensus 123 g~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~ 200 (381)
T 1t6e_X 123 ACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTK 200 (381)
T ss_dssp EECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCC
T ss_pred ecCcccccCCCCCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccC
Confidence 9998763222235689999999999999999999998789999999874 6799999998764 1 4555554332
Q ss_pred -CCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhc-------ccccccCCCCCc
Q 010838 135 -RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETH-------VLKRIRGPDPNY 206 (499)
Q Consensus 135 -~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~-------~~~~~~~~~~~~ 206 (499)
...+|.|++++|.||++.+.++...|. +..+||||||++++||+++|++|.++|.+++. .+.+.. .....
T Consensus 201 ~~~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~-~~~~~ 278 (381)
T 1t6e_X 201 GGSPAHYISARSIVVGDTRVPVPEGALA-TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAV-EAVAP 278 (381)
T ss_dssp TTCCSCEECEEEEEETTEECCCCTTCSC-TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEE-CCCTT
T ss_pred CCCcceEEEEEEEEEcCEEecCCHHHcc-CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccC-CCCCC
Confidence 124677999999999999887665553 45799999999999999999999999988764 122221 11133
Q ss_pred cccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeecCCcEEEEEEEcCC--------CCeeecHHhhheE
Q 010838 207 DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNSD--------STTLLGGIVVRNT 278 (499)
Q Consensus 207 ~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~~~~~Cl~ii~~~~--------~~~ILG~~FLr~~ 278 (499)
+..|++.....-......+|+|+|+|++|++++|++++|+++..+ +..|+++..... +.||||+.|||++
T Consensus 279 ~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~ 356 (381)
T 1t6e_X 279 FGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDF 356 (381)
T ss_dssp CSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHHTTE
T ss_pred CCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHhCCc
Confidence 578975321110011237999999996679999999999998643 679998665543 5799999999999
Q ss_pred EEEEECCCCEEEEEeccC
Q 010838 279 LVTYDRGNDKVGFWKTNC 296 (499)
Q Consensus 279 yvVFD~en~rIGFA~s~C 296 (499)
|+|||++++|||||++..
T Consensus 357 yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 357 VLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEEETTTTEEEEEECCT
T ss_pred EEEEECCCCEEEEecccC
Confidence 999999999999999753
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=343.11 Aligned_cols=253 Identities=25% Similarity=0.429 Sum_probs=202.4
Q ss_pred CCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHH
Q 010838 20 RKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLV 92 (499)
Q Consensus 20 ~~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~ 92 (499)
+..|+|++.|++|+ ++|.+++|+|+|++ ++++++.|||+..+.+. +....+|||||||++.+ +++++|+
T Consensus 77 ~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 152 (351)
T 1tzs_A 77 QPGQSFSIQYGTGS-LSGIIGADQVSVEG---LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMM 152 (351)
T ss_dssp CCSCEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHH
T ss_pred ECCCEEEEEeCCCC-eEEEEEEeEEEECC---eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHH
Confidence 35799999999997 79999999999998 57889999999887664 33457899999999765 4899999
Q ss_pred HcCCCC-CcEEEeecCCCCC--CceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 93 EKGVIS-DSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 93 ~~glI~-n~FSl~L~~~~~~--~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
++|+|+ ++||+||++.... +|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+.. ..+..++|
T Consensus 153 ~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~~~~aii 227 (351)
T 1tzs_A 153 AQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFC-----SEGCQAIV 227 (351)
T ss_dssp HTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEEC-----TTCEEEEE
T ss_pred HCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEc-----CCCceEEe
Confidence 999998 8999999986433 7999999999986 3445555555578999999999999987532 23568999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.+++.+... . ..|..+|+. . +.+|+|+|+| +|.++.|++++|+++
T Consensus 228 DSGTs~~~lP~~~~~~l~~~~~~~~~-------~-g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~yi~~ 289 (351)
T 1tzs_A 228 DTGTSLITGPSDKIKQLQNAIGAAPV-------D-GEYAVECAN--------L-NVMPDVTFTI-NGVPYTLSPTAYTLL 289 (351)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEC-------S-SSEEECGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEC
T ss_pred ccCCcceeCCHHHHHHHHHHhCCccc-------C-CeEEEeCCC--------C-ccCCcEEEEE-CCEEEEECHHHhEee
Confidence 99999999999999999999854321 1 245556743 2 4799999999 899999999999988
Q ss_pred eeecCCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEeccCCcc
Q 010838 249 HMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~ 299 (499)
....++..|+..+... .+.||||++|||++|+|||++++|||||+++|...
T Consensus 290 ~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 290 DFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp C-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred ccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 6533356899766542 46899999999999999999999999999998763
No 6
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.1e-40 Score=342.01 Aligned_cols=251 Identities=20% Similarity=0.323 Sum_probs=207.3
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCCC--------ChHHHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLVE 93 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~--------S~~~qL~~ 93 (499)
.|+|.+.|++|+.++|.+++|+|++++ +++.++.|||+.... ..|||||||++.+ +++++|++
T Consensus 77 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~~L~~ 147 (342)
T 2qzx_A 77 NTRFDIKYGDGSYAKGKLYKDTVGIGG---VSVRDQLFANVWSTS------ARKGILGIGFQSGEATEFDYDNLPISLRN 147 (342)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEEC------SSSCEEECSCGGGCSSSSCCCCHHHHHHH
T ss_pred CCcEEEEeCCCCeEEEEEEEEEEEECC---EEecceEEEEEEecC------CCcCEEEEccccccCCCccCccHHHHHHH
Confidence 799999999998889999999999998 578899999998774 4799999999754 79999999
Q ss_pred cCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccC
Q 010838 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSG 171 (499)
+|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. +..++||||
T Consensus 148 qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDSG 220 (342)
T 2qzx_A 148 QGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA-------NTNVLLDSG 220 (342)
T ss_dssp TTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECTT
T ss_pred CCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC-------CcCEEEeCC
Confidence 99998 89999999765568999999999987 3455555555667999999999999998753 247999999
Q ss_pred CceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEee-
Q 010838 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM- 250 (499)
Q Consensus 172 Ts~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~- 250 (499)
|++++||++++++|.+++.+.... .......|..+|+ .+|+|+|+|.+|.+++|++++|+++..
T Consensus 221 Tt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~i~~~~~~~~~~~ 285 (342)
T 2qzx_A 221 TTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADCK------------TSGTIDFQFGNNLKISVPVSEFLFQTYY 285 (342)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECTT------------CCCEEEEEETTTEEEEEEGGGGEECCBC
T ss_pred CCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEECC------------CCCcEEEEECCCcEEEEcHHHhcccccc
Confidence 999999999999999999654421 0111113444562 489999999778999999999998743
Q ss_pred --ecCCcEEEEEEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCccccccc
Q 010838 251 --KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (499)
Q Consensus 251 --~~~~~~Cl~ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~~~~~~ 304 (499)
...+..|++.+... +.||||++|||++|+|||++++|||||+++|....+..+
T Consensus 286 ~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 340 (342)
T 2qzx_A 286 TSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVA 340 (342)
T ss_dssp TTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred cCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEE
Confidence 11246899988775 579999999999999999999999999999987555444
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.3e-40 Score=340.92 Aligned_cols=252 Identities=20% Similarity=0.321 Sum_probs=206.2
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCC-------CChHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGR-------LSVVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~-------~S~~~qL~~~ 94 (499)
.|+|.+.|++|+.++|.+++|+|+|++ ++++++.|||++... ..|||||||++. .+++++|+++
T Consensus 77 ~~~~~i~Yg~gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~~~~~L~~q 147 (342)
T 3pvk_A 77 NTPFKIGYGDGSSSQGTLYKDTVGFGG---VSIKNQVLADVDSTS------IDQGILGVGYKTNEAGGSYDNVPVTLKKQ 147 (342)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEES------SSSCEEECSCGGGCSSCSSCCHHHHHHHT
T ss_pred CCeEEEEecCCCeEEEEEEEEEEEECC---EEecceEEEEEEccC------CCccEEEecCccccccccCCcHHHHHHhc
Confidence 789999999999899999999999998 578899999998765 479999999986 4799999999
Q ss_pred CCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCC
Q 010838 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (499)
Q Consensus 95 glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGT 172 (499)
|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ +..++|||||
T Consensus 148 g~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~------~~~~iiDSGt 221 (342)
T 3pvk_A 148 GVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTD------NVDVLLDSGT 221 (342)
T ss_dssp TSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEE------EEEEEECTTC
T ss_pred CCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCC------CceEEEeCCC
Confidence 9998 89999998866668999999999987 34455555556679999999999999987642 2479999999
Q ss_pred ceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeec
Q 010838 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (499)
Q Consensus 173 s~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~ 252 (499)
++++||++++++|.+++.+..... ......|..+|+ ..|+|+|+|++|.+++|++++|+++....
T Consensus 222 t~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~------------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 222 TITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCN------------LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp SSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSC------------CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred CCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecC------------CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 999999999999999996544310 000112455663 46999999966899999999999874321
Q ss_pred CC---cEEEEEEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCccccccc
Q 010838 253 SG---AYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (499)
Q Consensus 253 ~~---~~Cl~ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~~~~~~ 304 (499)
.+ ..|+..+.. .+.||||++|||++|+|||++++|||||+++|...++..+
T Consensus 287 ~g~~~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~ 340 (342)
T 3pvk_A 287 DGQPYDKCQLLFDV-NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISA 340 (342)
T ss_dssp ------CEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred CCCcCCeeEEEEee-CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEE
Confidence 22 689988877 4789999999999999999999999999999986555444
No 8
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-40 Score=340.67 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=208.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCCC----------------
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL---------------- 85 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~---------------- 85 (499)
.|.|.+.|++|+.++|.+++|+|+|++ ++++++.|||++..++ .+||||||++.+
T Consensus 71 ~~~~~i~Yg~gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~~~~~~~~~ 141 (339)
T 3fv3_A 71 GAAFTIRYGDGSTSQGTWGKDTVTING---VSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSGRQTTPNYD 141 (339)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTSCBCSCCCC
T ss_pred CceEEEEECCCceEEEEEEEEEEEECC---EEECceEEEEEEecCC------CceeEEecCccccccccccccccCccCC
Confidence 799999999998999999999999998 5788999999998764 699999999754
Q ss_pred ChHHHHHHcCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCC
Q 010838 86 SVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGG 163 (499)
Q Consensus 86 S~~~qL~~~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~ 163 (499)
+++++|+++|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. +
T Consensus 142 ~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~-------~ 214 (339)
T 3fv3_A 142 NVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF-------G 214 (339)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE-------E
T ss_pred cHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC-------C
Confidence 3899999999998 89999999866668999999999987 3445555555567999999999999998753 2
Q ss_pred CcEEEccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCC
Q 010838 164 HGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPE 243 (499)
Q Consensus 164 ~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~ 243 (499)
..++|||||++++||++++++|.+++.+..... ......|..+|+. ..+|+|+|+|++|.+++|+++
T Consensus 215 ~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~----------~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 215 DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQYLYFIDCNT----------DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEEEEEECTTC----------CCCSEEEEEETTSCEEEEEGG
T ss_pred ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCceEEEecCC----------CCCCcEEEEECCCCEEEECHH
Confidence 479999999999999999999999997544311 0112234566742 368999999966899999999
Q ss_pred CceEEeeecCCcEEEEEEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCccccccc
Q 010838 244 NYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWRRLQ 304 (499)
Q Consensus 244 dYi~~~~~~~~~~Cl~ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~~~~~~ 304 (499)
+|+++.. +..|+..+.. ++.||||++|||++|+|||++++|||||+++|...++..+
T Consensus 282 ~~~~~~~---~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~~ 338 (339)
T 3fv3_A 282 EYVYQNG---DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSISA 338 (339)
T ss_dssp GGEEECS---SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred HheeeCC---CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceEE
Confidence 9998752 5678777766 5789999999999999999999999999999996555443
No 9
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=349.71 Aligned_cols=247 Identities=24% Similarity=0.420 Sum_probs=204.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~ 93 (499)
..|+|.++|++|+ ++|.+++|+|++++ ++++ +.|||++.+.+. +....+|||||||++.+ +++++|++
T Consensus 118 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~ 192 (383)
T 2x0b_A 118 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 192 (383)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEEEETT---EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHT
T ss_pred CCcEEEEEcCCcc-EEEEEEeeEEEEcC---ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHh
Confidence 3699999999997 79999999999998 5777 999999987654 44567899999999865 48999999
Q ss_pred cCCCC-CcEEEeecCCCCC----CceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEE
Q 010838 94 KGVIS-DSFSLCYGGMDVG----GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~~~----~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (499)
+|+|+ ++||+||.+.... +|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+. +..+..++
T Consensus 193 qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-----~~~~~~ai 267 (383)
T 2x0b_A 193 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-----CEDGCLAL 267 (383)
T ss_dssp TTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-----STTCEEEE
T ss_pred CCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-----cCCCcEEE
Confidence 99998 8999999986433 7999999999987 345666666677899999999999998642 23456899
Q ss_pred EccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 010838 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (499)
Q Consensus 168 vDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~ 247 (499)
|||||+++++|++++++|.++|.+.. ....|..+|+. . +.+|+|+|+| +|+++.|+|++|++
T Consensus 268 iDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~--------~-~~~P~i~f~~-~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 268 VDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNE--------G-PTLPDISFHL-GGKEYTLTSADYVF 329 (383)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGG--------T-TTCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEeccc--------c-ccCceEEEEE-CCEEEEECHHHhEe
Confidence 99999999999999999999985431 12345566743 2 4799999999 89999999999998
Q ss_pred EeeecCCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 248 RHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 248 ~~~~~~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..+.++..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 87543456999766542 4689999999999999999999999999863
No 10
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-40 Score=345.98 Aligned_cols=244 Identities=26% Similarity=0.482 Sum_probs=200.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~~ 94 (499)
.|+|.+.|++|+ ++|.+++|+|++++ ++++++.|||+..+.+. +....+|||||||++.+ +++++|+++
T Consensus 112 ~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~q 187 (370)
T 3psg_A 112 SQELSITYGTGS-MTGILGYDTVQVGG---ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQ 187 (370)
T ss_dssp EEEEEEESSSCE-EEEEEEEEEEEETT---EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred CcEEEEEeCCce-EEEEEEEEEEeeCC---cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHC
Confidence 689999999997 79999999999998 58889999999888764 44567899999999765 589999999
Q ss_pred CCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCC
Q 010838 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (499)
Q Consensus 95 glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGT 172 (499)
|+|+ ++||+||.+....+|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+.. ..+..++|||||
T Consensus 188 g~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~-----~~~~~aiiDTGT 262 (370)
T 3psg_A 188 GLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIAC-----SGGCQAIVDTGT 262 (370)
T ss_dssp TCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEEC-----TTCEEEEECTTC
T ss_pred CCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEec-----CCCceEEEcCCC
Confidence 9998 89999999865568999999999987 4555666566678999999999999987652 345689999999
Q ss_pred ceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeec
Q 010838 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (499)
Q Consensus 173 s~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~ 252 (499)
+++++|++++++|.++|.+.. .....|..+|. .. +.+|+|+|+| +|++++|++++|+++.
T Consensus 263 s~~~lP~~~~~~i~~~i~a~~-------~~~g~~~v~C~--------~~-~~lP~i~f~~-~g~~~~l~~~~yi~~~--- 322 (370)
T 3psg_A 263 SLLTGPTSAIANIQSDIGASE-------NSDGEMVISCS--------SI-DSLPDIVFTI-DGVQYPLSPSAYILQD--- 322 (370)
T ss_dssp CSEEEEHHHHHHHHHHTTCEE-------CTTCCEECCGG--------GG-GGCCCEEEEE-TTEEEEECHHHHEEEC---
T ss_pred CcEECCHHHHHHHHHHhCCcc-------cCCCcEEEECC--------Cc-ccCCcEEEEE-CCEEEEECHHHhcccC---
Confidence 999999999999999985432 11223455563 33 4799999999 8999999999999982
Q ss_pred CCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 253 SGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 253 ~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..|+..+... ++.||||++|||++|+|||++++|||||++.
T Consensus 323 -~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 -DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 44699877652 3359999999999999999999999999873
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.8e-40 Score=335.02 Aligned_cols=244 Identities=24% Similarity=0.412 Sum_probs=201.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~ 93 (499)
..|+|.+.|++|+ ++|.+++|+|++++ ++++++.|||+..+++. +.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 144 (323)
T 3cms_A 69 LGKPLSIHYGTGS-MQGILGYDTVTVSN---IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMN 144 (323)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHH
T ss_pred CCcEEEEEeCCCC-eEEEEEEEEEEECC---eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHH
Confidence 3699999999987 79999999999998 57889999999987653 33346899999999754 58999999
Q ss_pred cCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccC
Q 010838 94 KGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSG 171 (499)
+|+|+ ++||+||.+.+. .|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++||||
T Consensus 145 q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~-----~~~~aiiDSG 218 (323)
T 3cms_A 145 RHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACE-----GGCQAILDTG 218 (323)
T ss_dssp TTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEST-----TCEEEEECTT
T ss_pred CCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecC-----CCcEEEEecC
Confidence 99997 899999998643 3999999999986 34555655556789999999999999987532 3468999999
Q ss_pred CceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeee
Q 010838 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (499)
Q Consensus 172 Ts~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~ 251 (499)
|++++||++++++|.+++.+... ....|..+|+. . +.+|+|+|+| +|++++|+|++|+++.
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~-- 279 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQN-------QYGEFDIDCDN--------L-SYMPTVVFEI-NGKMYPLTPSAYTSQD-- 279 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEE-------TTTEEEECTTC--------T-TTSCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred CccEeCCHHHHHHHHHHhCCeec-------CCCcEEEECCC--------C-ccCceEEEEE-CCEEEEECHHHhccCC--
Confidence 99999999999999999854311 12234556753 2 4799999999 8999999999999982
Q ss_pred cCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 252 VSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 252 ~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 280 --~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 --QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp --TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 67999866654 5789999999999999999999999999864
No 12
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.2e-40 Score=332.71 Aligned_cols=243 Identities=24% Similarity=0.439 Sum_probs=203.3
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~~ 94 (499)
.|.|.+.|++|+ ++|.+++|+|++++ ++++++.|||+...++. +.....|||||||++.+ +++++|+++
T Consensus 67 ~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~ 142 (320)
T 4aa9_A 67 GKPLSIHYGTGS-MEGFLGYDTVTVSN---IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDR 142 (320)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHT
T ss_pred CcEEEEEECCcE-EEEEEEEEEEEECC---EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhC
Confidence 689999999997 79999999999998 57889999999988764 44556899999999654 589999999
Q ss_pred CCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCC
Q 010838 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (499)
Q Consensus 95 glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGT 172 (499)
|+|+ ++||+||.+. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+..+ .+..++|||||
T Consensus 143 g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~-----~~~~~iiDsGt 216 (320)
T 4aa9_A 143 HLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACV-----GGCQAILDTGT 216 (320)
T ss_dssp TCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEEST-----TCEEEEECTTC
T ss_pred CCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccC-----CCcEEEEECCC
Confidence 9997 8999999985 467999999999987 34555655567789999999999999987642 34589999999
Q ss_pred ceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeec
Q 010838 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (499)
Q Consensus 173 s~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~ 252 (499)
++++||++++++|.+++.+... ....|..+|.. . +.+|+|+|+| +|++++|++++|+.+.
T Consensus 217 t~~~lP~~~~~~i~~~~~~~~~-------~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~--- 276 (320)
T 4aa9_A 217 SVLFGPSSDILKIQMAIGATEN-------RYGEFDVNCGN--------L-RSMPTVVFEI-NGRDYPLSPSAYTSKD--- 276 (320)
T ss_dssp SSEEEEHHHHHHHHHHTTCEEC-------TTSCEEECGGG--------G-GGCCCEEEEE-TTEEEEECHHHHEEEE---
T ss_pred CcEECCHHHHHHHHHHhCCccc-------CCCcEEEeCCC--------C-CcCceEEEEE-CCEEEEECHHHhccCC---
Confidence 9999999999999999854321 12345556642 2 4799999999 8999999999999763
Q ss_pred CCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 253 SGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 253 ~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 -QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp -TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 67899766554 4679999999999999999999999999874
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.8e-39 Score=329.94 Aligned_cols=244 Identities=21% Similarity=0.407 Sum_probs=201.0
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecC-CCCCCCCceEEeeCCCCC------ChHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-DLYTQRADGIMGLGRGRL------SVVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~-~~~~~~~DGILGLG~~~~------S~~~qL~~ 93 (499)
..|+|.+.|++| +++|.+++|+|++++ ++++++.|||++.+++ .+.....|||||||++.+ +++++|++
T Consensus 68 ~~~~~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 143 (329)
T 1dpj_A 68 NGTEFAIQYGTG-SLEGYISQDTLSIGD---LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQ 143 (329)
T ss_dssp EEEEEEEEETTE-EEEEEEEEEEEEETT---EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCcEEEEEECCc-eEEEEEEEEEEEECC---eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHh
Confidence 369999999999 689999999999998 5788999999998765 344557899999999765 47899999
Q ss_pred cCCCC-CcEEEeecCCC---CCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 94 KGVIS-DSFSLCYGGMD---VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~---~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
+|+|+ ++||+||.+.. ..+|.|+|||+|+++ ...+.|++.....+|.|.+++|.|+++.+.. .+..++|
T Consensus 144 qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 217 (329)
T 1dpj_A 144 QDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAEL------ESHGAAI 217 (329)
T ss_dssp TTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEC------SSCEEEE
T ss_pred cCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecC------CCccEEe
Confidence 99997 89999998642 247999999999987 3455665555678999999999999987753 3468999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.+++.+.. .....|..+|. .. ..+|+|+|+| +|.+++|+|++|+++
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~-------~~~g~~~~~C~--------~~-~~~P~i~f~f-~g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 218 DTGTSLITLPSGLAEMINAEIGAKK-------GWTGQYTLDCN--------TR-DNLPDLIFNF-NGYNFTIGPYDYTLE 280 (329)
T ss_dssp CTTCSCEEECHHHHHHHHHHHTCEE-------CTTSSEEECGG--------GG-GGCCCEEEEE-TTEEEEECTTTSEEE
T ss_pred eCCCCcEECCHHHHHHHHHHhCCcc-------CCCCeEEEECC--------CC-CcCCcEEEEE-CCEEEEECHHHhEec
Confidence 9999999999999999999985431 12233444563 22 4799999999 789999999999987
Q ss_pred eeecCCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 249 HMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
. +..|+..+... ++.||||++|||++|+|||++++|||||+++
T Consensus 281 ~----~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 281 V----SGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp E----TTEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C----CCEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 6 36899766542 4689999999999999999999999999864
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=9.4e-40 Score=337.59 Aligned_cols=252 Identities=19% Similarity=0.314 Sum_probs=204.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecC-----C-CCCCCCceEEeeCCCC-----------
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETG-----D-LYTQRADGIMGLGRGR----------- 84 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~-----~-~~~~~~DGILGLG~~~----------- 84 (499)
.|+|.+.|++|+ ++|.+++|+|+|++ ++++++.|||++.+++ . +.....|||||||++.
T Consensus 75 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 150 (361)
T 1mpp_A 75 DYNLNITYGTGG-ANGIYFRDSITVGG---ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDT 150 (361)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCC
T ss_pred CCeEEEEECCce-EEEEEEEEEEEECC---EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccccccc
Confidence 689999999997 79999999999998 5788999999999876 3 4456789999999964
Q ss_pred -CChHHHHHHcCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCC----ceEEEEeEEEEcCEEeecCC
Q 010838 85 -LSVVDQLVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSP----YYNIELKELRVAGKPLKVSP 157 (499)
Q Consensus 85 -~S~~~qL~~~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~----~w~V~l~~I~Vgg~~l~l~~ 157 (499)
.+++++|+++|+|+ ++||+||.+. ...|.|+|||+|+++ ...+.|.+..... +|.|.+++|.|+++.+..+
T Consensus 151 ~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~- 228 (361)
T 1mpp_A 151 YNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSF- 228 (361)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEE-
T ss_pred CCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccC-
Confidence 45788999999998 8999999985 457999999999986 3344444333333 8999999999999876422
Q ss_pred ceecCCCcEE-EccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCC-CeEEEEEc-C
Q 010838 158 RIFDGGHGTV-LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTF-PQVDMVFG-N 234 (499)
Q Consensus 158 ~~f~~~~~ai-vDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P~Itf~f~-~ 234 (499)
.+..++ |||||++++||++++++|.+++.+... . ....|..+|+. . +.+ |+|+|+|. +
T Consensus 229 ----~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~---~~g~~~~~C~~--------~-~~~~p~i~f~f~~g 289 (361)
T 1mpp_A 229 ----DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---E---SQQGYTVPCSK--------Y-QDSKTTFSLVLQKS 289 (361)
T ss_dssp ----EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---E---ETTEEEEEHHH--------H-TTCCCEEEEEEECT
T ss_pred ----CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---C---CCCcEEEECCC--------c-ccCCCcEEEEEEcC
Confidence 235799 999999999999999999999965422 1 12234566743 2 366 99999993 3
Q ss_pred -----CeEEEeCCCCceEEeeecCCcEEEEEEEc-CCCCeeecHHhhheEEEEEECCCCEEEEEeccCCcc
Q 010838 235 -----GQKLTLSPENYLFRHMKVSGAYCLGIFQN-SDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (499)
Q Consensus 235 -----g~~i~I~p~dYi~~~~~~~~~~Cl~ii~~-~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~ 299 (499)
|.++.|++++|+++... ++..|+..+.. .++.||||++|||++|+|||++++|||||+++|...
T Consensus 290 ~~~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 290 GSSSDTIDVSVPISKMLLPVDK-SGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp TCSSCEEEEEEEGGGGEEECSS-SSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred CcCCCCeEEEECHHHhEEecCC-CCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 89999999999998643 35689966665 467899999999999999999999999999999864
No 15
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7e-40 Score=335.38 Aligned_cols=247 Identities=24% Similarity=0.422 Sum_probs=205.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~ 93 (499)
..|.|.+.|++|+ ++|.+++|+|+|++ +++ ++.|||+...++. +....+|||||||++.. +++++|++
T Consensus 75 ~~~~~~i~Yg~gs-~~G~~~~D~v~ig~---~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 149 (341)
T 3k1w_A 75 NGTELTLRYSTGT-VSGFLSQDIITVGG---ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIIS 149 (341)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEEEETT---EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred CCCEEEEEECCcE-EEEEEEEEEEEECC---cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHH
Confidence 4799999999987 79999999999998 467 9999999988764 45567899999999765 48999999
Q ss_pred cCCCC-CcEEEeecCCC----CCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEE
Q 010838 94 KGVIS-DSFSLCYGGMD----VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTV 167 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~----~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~ai 167 (499)
+|+|+ ++||+||.+.. ...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. ..+..++
T Consensus 150 qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~-----~~~~~~i 224 (341)
T 3k1w_A 150 QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLC-----EDGCLAL 224 (341)
T ss_dssp HTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEEC-----TTCEEEE
T ss_pred CCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeec-----CCCCEEE
Confidence 99998 89999999864 347999999999987 3455666566778999999999999987543 2346899
Q ss_pred EccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceE
Q 010838 168 LDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLF 247 (499)
Q Consensus 168 vDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~ 247 (499)
|||||++++||++++++|.+++.+... ... |..+|. .. ..+|+|+|+| +|++++|++++|++
T Consensus 225 iDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g-~~~~C~--------~~-~~~p~i~f~f-~g~~~~l~~~~~~~ 286 (341)
T 3k1w_A 225 VDTGASYISGSTSSIEKLMEALGAKKR-------LFD-YVVKCN--------EG-PTLPDISFHL-GGKEYTLTSADYVF 286 (341)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-------SSC-EEEEGG--------GG-GGCCCEEEEE-TTEEEEECHHHHBC
T ss_pred EECCCChhcCCHHHHHHHHHHcCCeec-------CCC-eEEeCC--------CC-CcCCcEEEEE-CCEEEEECHHHhee
Confidence 999999999999999999999854321 111 555664 22 4789999999 79999999999998
Q ss_pred EeeecCCcEEEEEEEc-----C-CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 248 RHMKVSGAYCLGIFQN-----S-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 248 ~~~~~~~~~Cl~ii~~-----~-~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+....++..|+..+.. . .+.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 287 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 8654446899977665 2 5689999999999999999999999999975
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.1e-39 Score=330.72 Aligned_cols=243 Identities=22% Similarity=0.411 Sum_probs=199.7
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCCC-------ChHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL-------SVVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~-------S~~~qL~~ 93 (499)
..|+|.++|++|+.++|.+++|+|++++ ++++++.|||++.+++.+.....|||||||++.+ +++++|++
T Consensus 69 ~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 69 DGRTWSISYGDGSSASGILAKDNVNLGG---LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred CCCEEEEEECCCCCEEEEEEEEEEEECC---EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 3599999999999899999999999998 5788999999998776555556899999999754 58999999
Q ss_pred cCCCC-CcEEEeecCC-CCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEEc
Q 010838 94 KGVIS-DSFSLCYGGM-DVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~-~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivD 169 (499)
+|+|+ ++||+||++. ....|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.||++ +. ..+..++||
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~------~~~~~~iiD 218 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV------ASSFDGILD 218 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE------ECCEEEEEC
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec------CCCceEEEe
Confidence 99997 8999999753 2467999999999886 3334443332 46799999999999993 32 234589999
Q ss_pred cCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 010838 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (499)
Q Consensus 170 SGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~ 249 (499)
|||++++||+++|+++++++.+.+. +. ..|..+|+. ..+|+|+|+| +|.++.|++++|++..
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~------~~-g~~~~~C~~----------~~~p~i~f~f-~g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDN------GD-GTYTISCDT----------SAFKPLVFSI-NGASFQVSPDSLVFEE 280 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEEC------SS-SCEEECSCG----------GGCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred cCCccEECCHHHHHHHHHHHhcccC------CC-CeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHEEEcC
Confidence 9999999999999999999965543 11 235556741 2589999999 6669999999999875
Q ss_pred eecCCcEEEEEEEcC-CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 250 MKVSGAYCLGIFQNS-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 250 ~~~~~~~Cl~ii~~~-~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
. +..|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 281 ~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 281 F---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp E---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred C---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 4 67899987654 678999999999999999999999999986
No 17
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.6e-39 Score=331.09 Aligned_cols=242 Identities=24% Similarity=0.423 Sum_probs=200.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~~ 94 (499)
.|+|++.|++|+. +|.+++|+|++++ ++++++.|||+..+++. +.....|||||||++.+ +++++|+++
T Consensus 68 ~~~~~i~Yg~Gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (324)
T 1am5_A 68 GKTVDLTYGTGGM-RGILGQDTVSVGG---GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQ 143 (324)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEEESSS---SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred CcEEEEEECCCCe-EEEEEECceeECC---cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhc
Confidence 6899999999975 9999999999998 57889999999988765 44567899999999764 589999999
Q ss_pred CCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCC
Q 010838 95 GVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGT 172 (499)
Q Consensus 95 glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGT 172 (499)
|+|+ ++||+||.+.+...|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. .+ ..++|||||
T Consensus 144 g~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-----~~-~~aiiDSGT 217 (324)
T 1am5_A 144 SLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAAC-----EG-CQAIVDTGT 217 (324)
T ss_dssp TCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCC-----CC-EEEEECTTC
T ss_pred CCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeec-----cC-ceEEEecCC
Confidence 9997 89999999865568999999999986 3344444334567999999999999987532 12 589999999
Q ss_pred ceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeec
Q 010838 173 TYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252 (499)
Q Consensus 173 s~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~ 252 (499)
++++||++++++|.+++.+. . ....|..+|+. . +.+|+|+|+| +|.+++|++++|+++.
T Consensus 218 t~~~lp~~~~~~l~~~~~~~-~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~--- 276 (324)
T 1am5_A 218 SKIVAPVSALANIMKDIGAS-E-------NQGEMMGNCAS--------V-QSLPDITFTI-NGVKQPLPPSAYIEGD--- 276 (324)
T ss_dssp SSEEECTTTHHHHHHHHTCE-E-------CCCCEECCTTS--------S-SSSCCEEEEE-TTEEEEECHHHHEEES---
T ss_pred ccEECCHHHHHHHHHHhCCc-c-------cCCcEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccC---
Confidence 99999999999999998543 1 12235566753 2 4799999999 8999999999999876
Q ss_pred CCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 253 SGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 253 ~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 277 -~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 -QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp -SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 56899766542 4579999999999999999999999999874
No 18
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.8e-39 Score=337.95 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=201.0
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEe----ecCCCCCCCCceEEeeCCCCC------ChHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQL 91 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~----~s~~~~~~~~DGILGLG~~~~------S~~~qL 91 (499)
.|+|.+.|++|+ ++|.+++|+|++++ +++.+ .|||+.. ++ .+....+|||||||++.+ +++++|
T Consensus 118 ~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l 191 (375)
T 1miq_A 118 GTKVDITYGSGT-VKGFFSKDLVTLGH---LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVEL 191 (375)
T ss_dssp EEEEEEEETTEE-EEEEEEEEEEEETT---EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHH
T ss_pred CcEEEEEeCCCe-EEEEEEEEEEEEcC---ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHH
Confidence 689999999997 79999999999998 57788 9999998 54 333456899999999765 589999
Q ss_pred HHcCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEc
Q 010838 92 VEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (499)
Q Consensus 92 ~~~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivD 169 (499)
+++|+|+ ++||+||.+.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++.+ .+..++||
T Consensus 192 ~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~--------~~~~aiiD 262 (375)
T 1miq_A 192 KNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM--------EKANVIVD 262 (375)
T ss_dssp HHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE--------EEEEEEEC
T ss_pred HhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc--------ccceEEec
Confidence 9999997 89999999865568999999999986 34555555556789999999 99999876 13479999
Q ss_pred cCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 010838 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (499)
Q Consensus 170 SGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~ 249 (499)
|||++++||++++++|.+++.+... .....|..+|+. ..+|+|+|+| +|.+++|+|++|+++.
T Consensus 263 SGTs~~~lP~~~~~~l~~~~~~~~~------~~~g~~~~~C~~----------~~~P~i~f~f-~g~~~~l~~~~yi~~~ 325 (375)
T 1miq_A 263 SGTTTITAPSEFLNKFFANLNVIKV------PFLPFYVTTCDN----------KEMPTLEFKS-ANNTYTLEPEYYMNPI 325 (375)
T ss_dssp TTBSSEEECHHHHHHHHHHHTCEEC------TTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECGGGSEEES
T ss_pred CCCccEEcCHHHHHHHHHHhCCccc------CCCCeEEEECCC----------CCCCcEEEEE-CCEEEEECHHHhEeec
Confidence 9999999999999999999855321 122345667753 3799999999 8999999999999987
Q ss_pred eecCCcEEEEEEEcCC---CCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 250 MKVSGAYCLGIFQNSD---STTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 250 ~~~~~~~Cl~ii~~~~---~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
...+...|+..+...+ +.||||++|||++|+|||++++|||||+++
T Consensus 326 ~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 326 LEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 5323569997666553 689999999999999999999999999873
No 19
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.6e-39 Score=330.17 Aligned_cols=245 Identities=23% Similarity=0.447 Sum_probs=201.6
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~~ 94 (499)
.|+|++.|++|+. +|.+++|+|++++ ++++++.|||+..+++. +.....|||||||++.+ +++++|+++
T Consensus 68 ~~~~~i~Yg~gs~-~G~~~~D~v~~g~---~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (329)
T 1htr_B 68 GQTFSLQYGSGSL-TGFFGYDTLTVQS---IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQE 143 (329)
T ss_dssp EEEEEEEETTEEE-EEEEEEEEEEETT---EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHT
T ss_pred CcEEEEEeCCCCe-EEEEEeeeEEEcc---eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhc
Confidence 6899999999975 9999999999998 57889999999887664 33457899999999865 589999999
Q ss_pred CCCC-CcEEEeecCCCCC-CceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccC
Q 010838 95 GVIS-DSFSLCYGGMDVG-GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (499)
Q Consensus 95 glI~-n~FSl~L~~~~~~-~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSG 171 (499)
|+|+ ++||+||.+.+.. +|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.. ...+..++||||
T Consensus 144 g~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~----~~~~~~aiiDSG 219 (329)
T 1htr_B 144 GALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGW----CSEGCQAIVDTG 219 (329)
T ss_dssp TCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCT----TTTCEEEEECTT
T ss_pred CCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeee----cCCCceEEEecC
Confidence 9997 8999999986544 7999999999986 3445555555678999999999999987642 123468999999
Q ss_pred CceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeee
Q 010838 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMK 251 (499)
Q Consensus 172 Ts~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~ 251 (499)
|++++||++++++|.+++.+... ....|..+|+. . +.+|+|+|+| +|.+++|+|++|+++..
T Consensus 220 Tt~~~lp~~~~~~l~~~~~~~~~-------~~g~~~~~C~~--------~-~~~P~i~f~f-~g~~~~i~~~~y~~~~~- 281 (329)
T 1htr_B 220 TSLLTVPQQYMSALLQATGAQED-------EYGQFLVNCNS--------I-QNLPSLTFII-NGVEFPLPPSSYILSNN- 281 (329)
T ss_dssp CCSEEEEGGGHHHHHHHHTCEEC-------TTSCEEECGGG--------G-GGSCCEEEEE-TTEEEEECHHHHEEECS-
T ss_pred CccEECCHHHHHHHHHHhCCeec-------CCCeEEEeCCC--------c-ccCCcEEEEE-CCEEEEECHHHhcccCC-
Confidence 99999999999999999854321 12235566743 2 4799999999 89999999999998864
Q ss_pred cCCcEEEEEEEcC------CC-CeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 252 VSGAYCLGIFQNS------DS-TTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 252 ~~~~~Cl~ii~~~------~~-~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+.|+..+... ++ .||||++|||++|+|||++++|||||+++
T Consensus 282 ---g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 ---GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ---SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3899766542 34 79999999999999999999999999864
No 20
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=4e-39 Score=329.16 Aligned_cols=245 Identities=15% Similarity=0.236 Sum_probs=196.2
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCCceEEeeCCCCC---------ChHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQ 90 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~---------S~~~q 90 (499)
..|+|++.|++|+.++|.+++|+|+|++ ++++++.|||+..+++.+. ....|||||||++.+ +++++
T Consensus 71 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 71 SGASWSISYGDGSSSSGDVYTDKVTIGG---FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp TTCBEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCcEEEEEEEEEEEECC---EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 4689999999999889999999999998 5788999999998766443 246899999999653 48899
Q ss_pred HHHcCCCCCcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 91 L~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
|+++ +-+++||+||.+. .+|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|+++.+.. ....++|
T Consensus 148 l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~------~~~~aii 218 (329)
T 3c9x_A 148 AASS-LAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNR------NSIDGIA 218 (329)
T ss_dssp HHTT-SSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCS------CCEEEEE
T ss_pred HHHh-cCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccC------CCceEEE
Confidence 9886 3348999999863 57999999999886 3444444333 467999999999999986531 3458999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++.
T Consensus 219 DSGTt~~~lp~~~~~~i~~~i~~a~~-----~~~~~~~~~~C~-----------~~~P~i~f~f-~g~~~~ip~~~~~~~ 281 (329)
T 3c9x_A 219 DTGTTLLLLDDNVVDAYYANVQSAQY-----DNQQEGVVFDCD-----------EDLPSFSFGV-GSSTITIPGDLLNLT 281 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTCTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECGGGGEEE
T ss_pred ECCCCcEeCCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeee
Confidence 99999999999999999888733211 111223445674 3789999999 799999999999987
Q ss_pred eeecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
..+.+...|++.+... .+.||||++|||++|+|||++++|||||+.
T Consensus 282 ~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 282 PLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred ccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 6432347999977654 578999999999999999999999999973
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.8e-39 Score=330.34 Aligned_cols=244 Identities=18% Similarity=0.292 Sum_probs=195.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCCceEEeeCCCCC---------ChHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQL 91 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~---------S~~~qL 91 (499)
.|+|+++|++|+.++|.+++|+|++++ ++++++.|||++.+++.+. ....|||||||++.+ +++++|
T Consensus 71 ~~~~~i~Yg~Gs~~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 71 GATWSISYGDGSSSSGDVYTDTVSVGG---LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred CCeEEEEeCCCCcEEEEEEEEEEEECC---EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 689999999998889999999999998 5788999999998766443 246899999999653 488999
Q ss_pred HHcCCCCCcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEEc
Q 010838 92 VEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (499)
Q Consensus 92 ~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivD 169 (499)
+++ +-+++||+||.+. ..|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|+++.+.. .+..++||
T Consensus 148 ~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~------~~~~aiiD 218 (329)
T 1oew_A 148 KAS-LDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKS------TSIDGIAD 218 (329)
T ss_dssp TTT-SSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEE------EEEEEEEC
T ss_pred HHh-ccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccC------CCceEEEe
Confidence 886 3348999999863 57999999999987 3344444332 467999999999999986531 23589999
Q ss_pred cCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 010838 170 SGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (499)
Q Consensus 170 SGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~ 249 (499)
|||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.++.|++++|++..
T Consensus 219 SGTt~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~ip~~~~~~~~ 281 (329)
T 1oew_A 219 TGTTLLYLPATVVSAYWAQVSGAKS-----SSSVGGYVFPCS-----------ATLPSFTFGV-GSARIVIPGDYIDFGP 281 (329)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred CCCCCEECCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEE-CCEEEEECHHHeeeee
Confidence 9999999999999999988733211 111223445674 3789999999 8999999999999876
Q ss_pred eecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEEC-CCCEEEEEec
Q 010838 250 MKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDR-GNDKVGFWKT 294 (499)
Q Consensus 250 ~~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~-en~rIGFA~s 294 (499)
.+.+...|++.+... .+.||||++|||++|+|||+ +++|||||+.
T Consensus 282 ~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 282 ISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred cCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 332357999977654 57899999999999999999 9999999973
No 22
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=5.3e-39 Score=328.55 Aligned_cols=245 Identities=17% Similarity=0.288 Sum_probs=200.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEeeCCCCCC-------hHHHHHHc
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRLS-------VVDQLVEK 94 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~S-------~~~qL~~~ 94 (499)
.|+|++.|++|+. +|.+++|+|++++ ++++++.|||++.+...+....+|||||||++.++ ++++|+++
T Consensus 72 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~---~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 147 (330)
T 1yg9_A 72 GNVQVKFFDTGSA-VGRGIEDSLTISQ---LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEE 147 (330)
T ss_dssp EEEEEEETTTEEE-EEEEEEEEEEETT---EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHT
T ss_pred CCEEEEEECCceE-EEEEEEEEEEECC---EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhc
Confidence 4789999999975 9999999999998 57889999999988433444568999999998765 89999999
Q ss_pred CCCCCcEEEeecCCCCC--CceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccC
Q 010838 95 GVISDSFSLCYGGMDVG--GGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSG 171 (499)
Q Consensus 95 glI~n~FSl~L~~~~~~--~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSG 171 (499)
|+|+++||+||.+.... .|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+. ..+..++||||
T Consensus 148 g~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~------~~~~~aiiDSG 221 (330)
T 1yg9_A 148 NLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA------PAGTQAIIDTS 221 (330)
T ss_dssp TSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE------CTTCEEEECTT
T ss_pred CCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc------CCCcEEEEecC
Confidence 98888899999976322 7999999999987 344555555567899999999999998764 23568999999
Q ss_pred CceeeecHHHHHHHHHHHHHhhcccccccCCCCCc-cccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEee
Q 010838 172 TTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNY-DDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (499)
Q Consensus 172 Ts~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~ 250 (499)
|++++||++++++|.+++.+... ..+ ...| ..+|+ .. +.+|+|+|+| +|.+++|++++|+++.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~~----~~g-~~~~~~~~C~--------~~-~~~p~i~f~f-gg~~~~l~~~~y~~~~- 285 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVVE----KTT-TRRICKLDCS--------KI-PSLPDVTFVI-NGRNFNISSQYYIQQN- 285 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEEE----ECS-SCEEEEECGG--------GG-GGSCCEEEEE-TTEEEEECHHHHEEEE-
T ss_pred CccccCCHHHHHHHHHHhCCccc----CCC-ceEEEEEECC--------Cc-cccCcEEEEE-CCEEEEECHHHhcccC-
Confidence 99999999999999999854321 011 0023 44553 32 4799999999 8999999999999886
Q ss_pred ecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 251 KVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 251 ~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 286 ---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 ---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 56899777653 5689999999999999999999999999873
No 23
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=333.19 Aligned_cols=270 Identities=23% Similarity=0.387 Sum_probs=205.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCCceEEeeCCCCC--------ChHHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQLV 92 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~--------S~~~qL~ 92 (499)
.|+|++.|++|+ ++|.+++|+|+|++.. ....++.|+++....+.+. ....|||||||++.+ +++++|+
T Consensus 65 ~~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 65 GFDVTVKYTQGS-WTGFVGEDLVTIPKGF-NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETTTE-EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred CceEEEEECCcE-EEEEEEEEEEEECCCc-cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 699999999997 5999999999998742 1122467888876655443 346799999999654 5889999
Q ss_pred HcCCCCCcEEEeecCC-------CCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCC
Q 010838 93 EKGVISDSFSLCYGGM-------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGH 164 (499)
Q Consensus 93 ~~glI~n~FSl~L~~~-------~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~ 164 (499)
+|+.++++||+||++. ...+|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.++...|. ..
T Consensus 143 ~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~-~~ 221 (383)
T 2ewy_A 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYN-AD 221 (383)
T ss_dssp HHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTT-SS
T ss_pred HccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccC-Cc
Confidence 9998888999999742 2457999999999886 3455565555678999999999999998876544332 35
Q ss_pred cEEEccCCceeeecHHHHHHHHHHHHHhhccccccc-CCCCCccccccCCCCcCcccccCCCCeEEEEEcCC-----eEE
Q 010838 165 GTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG-----QKL 238 (499)
Q Consensus 165 ~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g-----~~i 238 (499)
.++|||||++++||+++|++|.++|.+..... ... +....+..+|+..... .+..+|+|+|+|+++ .++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAVVEAVARASLIP-EFSDGFWTGSQLACWTNSET----PWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHHHHHHHHTTCSS-CCCHHHHHTSEEEEECSSSC----GGGGSCCEEEEEECSSTTEEEEE
T ss_pred cEEEEcCCccccCCHHHHHHHHHHHhhhcccc-cCccccccccccccccCCcc----cHhhCCcEEEEECCCCCCceEEE
Confidence 89999999999999999999999998765310 000 0001235678754321 124799999999553 489
Q ss_pred EeCCCCceEEeeec-CCcEEEE-EEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCcc
Q 010838 239 TLSPENYLFRHMKV-SGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (499)
Q Consensus 239 ~I~p~dYi~~~~~~-~~~~Cl~-ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~ 299 (499)
.|+|++|+.+..+. .+..|++ .+...++.||||++|||++|+|||++++|||||+++|...
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred EEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 99999999886432 3568986 3443467899999999999999999999999999999864
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=8.1e-39 Score=342.99 Aligned_cols=264 Identities=23% Similarity=0.409 Sum_probs=205.7
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCCC------hHHHHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS------VVDQLVE 93 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S------~~~qL~~ 93 (499)
..|+|++.|++|+ ++|.+++|+|+|++ ++++++.|||+..+.+. +....+|||||||++.++ ++++|++
T Consensus 108 ~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~ 183 (478)
T 1qdm_A 108 NGKPAAIQYGTGS-IAGYFSEDSVTVGD---LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIE 183 (478)
T ss_dssp CCCEEEEEETTEE-EEEEEEEEEEEETT---EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTT
T ss_pred CCcEEEEEcCCCC-eEEEEEEEEEEECC---eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHH
Confidence 4799999999997 79999999999998 57889999999887654 334568999999998764 7899999
Q ss_pred cCCCC-CcEEEeecCCC--CCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEc
Q 010838 94 KGVIS-DSFSLCYGGMD--VGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLD 169 (499)
Q Consensus 94 ~glI~-n~FSl~L~~~~--~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivD 169 (499)
+|+|+ ++||+||.+.. ..+|.|+|||+|+++ ...+.|++....++|.|.+++|.|+++.+.+.. .+..++||
T Consensus 184 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~----~~~~aiiD 259 (478)
T 1qdm_A 184 QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCA----GGCAAIAD 259 (478)
T ss_dssp TTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTT----TCEEEEEC
T ss_pred CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecC----CCceEEEc
Confidence 99998 89999998752 357999999999987 344555444457899999999999999876532 35689999
Q ss_pred cCCceeeecHHHHHHHHHHHHHhhc----------cc---------cc--------------ccCC-----------CC-
Q 010838 170 SGTTYAYLPGHAFAAFKDALIKETH----------VL---------KR--------------IRGP-----------DP- 204 (499)
Q Consensus 170 SGTs~i~LP~~v~~~l~~aI~~~v~----------~~---------~~--------------~~~~-----------~~- 204 (499)
|||+++++|+++|++|.++|.+... .+ .+ ..+. +.
T Consensus 260 TGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~ 339 (478)
T 1qdm_A 260 SGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDE 339 (478)
T ss_dssp SSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------------------
T ss_pred CCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccc
Confidence 9999999999999999999864310 00 00 0000 00
Q ss_pred --------------------------------------CccccccCC------CCcCcccccCCCCeEEEEEcCCeEEEe
Q 010838 205 --------------------------------------NYDDICFSG------AGRDVSELSKTFPQVDMVFGNGQKLTL 240 (499)
Q Consensus 205 --------------------------------------~~~~~C~~~------~~~~~~~~~~~~P~Itf~f~~g~~i~I 240 (499)
.....|+.. +.++|+.. ..+|+|+|+| +|+.+.|
T Consensus 340 ~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~-gg~~~~l 417 (478)
T 1qdm_A 340 PVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTI-GGKKFAL 417 (478)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEE-TTEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEE-CCEEEEE
Confidence 001345432 34677655 5899999999 8999999
Q ss_pred CCCCceEEeeecCCcEEEEEEEcC------CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 241 SPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 241 ~p~dYi~~~~~~~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
+|++|+++........|++.+... ++.||||+.|||++|+|||++++|||||++
T Consensus 418 ~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 418 KPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 999999987543346899876642 467999999999999999999999999986
No 25
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=4.6e-38 Score=329.40 Aligned_cols=290 Identities=21% Similarity=0.318 Sum_probs=215.4
Q ss_pred CcccccCCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCccccc-ceEEEEEEeecCCCC-
Q 010838 3 NTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY- 70 (499)
Q Consensus 3 sTy~~v~C~~~C~C~~----------~~~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~-~~~FG~~~~~s~~~~- 70 (499)
|+.-+|.|.+-|.|.. .+..|.|.+.|++|+ ++|.+++|+|+|++.. .+. .+.|+++....+.+.
T Consensus 51 Ss~lWv~~~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--~~~~~~~~~~~~~~~~~~~~ 127 (402)
T 3vf3_A 51 SSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGK-WEGELGTDLVSIPHGP--NVTVRANIAAITESDKFFIN 127 (402)
T ss_dssp CCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCE-EEEEEEEEEEECTTSC--SCEEEEEEEEEEEEESCSCT
T ss_pred CCceEEccCCCCcccCCcCcccCcccccCCCEEEEEECcEE-EEEEEEEEEEEECCcc--ccceeeeEEEEEcccccccc
Confidence 4455677765443322 123799999999997 5999999999998532 222 355888877766553
Q ss_pred CCCCceEEeeCCCC--------CChHHHHHHcCCCCCcEEEeecCC----------CCCCceEEECCCCCCC-Cceeeee
Q 010838 71 TQRADGIMGLGRGR--------LSVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHS 131 (499)
Q Consensus 71 ~~~~DGILGLG~~~--------~S~~~qL~~~glI~n~FSl~L~~~----------~~~~G~I~fGgiD~s~-~~~~~~~ 131 (499)
...+|||||||++. .+++++|+++++|+++||+||++. ....|.|+|||+|+++ ...+.|.
T Consensus 128 ~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~ 207 (402)
T 3vf3_A 128 GSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYT 207 (402)
T ss_dssp TCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEE
T ss_pred CCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEE
Confidence 35789999999964 368999999999998999999753 2357999999999987 3445555
Q ss_pred CCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhcccccccCCC-CCccccc
Q 010838 132 DPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPD-PNYDDIC 210 (499)
Q Consensus 132 ~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~-~~~~~~C 210 (499)
+.....+|.|.+++|.|+++.+.++...+ ....++|||||++++||++++++|.++|.+.... ....... ..+..+|
T Consensus 208 p~~~~~~w~v~l~~i~v~g~~~~~~~~~~-~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~C 285 (402)
T 3vf3_A 208 PIRREWYYEVIIVRVEINGQDLKMDCKEY-NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVC 285 (402)
T ss_dssp ECSSBTTBEECEEEEEETTEECCCCGGGG-GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCTTGGGTCSCEE
T ss_pred eCCcCcEEEEEEeEEEECCEEeccccccc-CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccc-cccCccccccccccc
Confidence 55567899999999999999988765433 2458999999999999999999999999887531 1111100 1225678
Q ss_pred cCCCCcCcccccCCCCeEEEEEcCCe-----EEEeCCCCceEEeeecC--CcEEEE-EEEcCCCCeeecHHhhheEEEEE
Q 010838 211 FSGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVS--GAYCLG-IFQNSDSTTLLGGIVVRNTLVTY 282 (499)
Q Consensus 211 ~~~~~~~~~~~~~~~P~Itf~f~~g~-----~i~I~p~dYi~~~~~~~--~~~Cl~-ii~~~~~~~ILG~~FLr~~yvVF 282 (499)
+...... +..+|+|+|+|+++. +++|+|++|+.+..+.. ...|++ .+...++.||||++|||++|+||
T Consensus 286 ~~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvf 361 (402)
T 3vf3_A 286 WQAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVF 361 (402)
T ss_dssp EETTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEE
T ss_pred cccccch----HhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEE
Confidence 6543211 237999999995542 69999999999875421 248996 33333678999999999999999
Q ss_pred ECCCCEEEEEeccCCcccc
Q 010838 283 DRGNDKVGFWKTNCSELWR 301 (499)
Q Consensus 283 D~en~rIGFA~s~C~~~~~ 301 (499)
|++++|||||+++|....+
T Consensus 362 D~~~~rIGfA~~~c~~~~~ 380 (402)
T 3vf3_A 362 DRARKRIGFAVSACHVHDE 380 (402)
T ss_dssp EGGGTEEEEEEETTCCBCS
T ss_pred ECCCCEEEEEecccCcccC
Confidence 9999999999999997543
No 26
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.5e-38 Score=337.09 Aligned_cols=299 Identities=21% Similarity=0.316 Sum_probs=223.3
Q ss_pred CcccccCCCCCCCCCC----------CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-C
Q 010838 3 NTYQALKCNPDCNCDN----------DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-T 71 (499)
Q Consensus 3 sTy~~v~C~~~C~C~~----------~~~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~-~ 71 (499)
|+.-+|.|..-|.|.. .+..|.|.+.|++|+. +|.+++|+|+|++...+. .++.|+++......+. .
T Consensus 97 Ss~lWV~~~~cc~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~-~~~~~~~~~~~~~~~~~~ 174 (455)
T 3lpj_A 97 SSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-VRANIAAITESDKFFING 174 (455)
T ss_dssp CCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-EEEEEEEEEEEESCSCTT
T ss_pred CcceEEecccccccCCcccCCCCCCcccCCccEEEEeCCeEE-EEEEEEEEEEECCCccee-eEEEEEEEEccCcccccC
Confidence 4455677765443222 1237999999999975 999999999998632122 2467899887776554 3
Q ss_pred CCCceEEeeCCCCC--------ChHHHHHHcCCCCCcEEEeecCC----------CCCCceEEECCCCCCC-CceeeeeC
Q 010838 72 QRADGIMGLGRGRL--------SVVDQLVEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSD 132 (499)
Q Consensus 72 ~~~DGILGLG~~~~--------S~~~qL~~~glI~n~FSl~L~~~----------~~~~G~I~fGgiD~s~-~~~~~~~~ 132 (499)
..+|||||||++.+ +++++|+++++|+++||+||++. ....|.|+|||+|+++ ...+.|.+
T Consensus 175 ~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p 254 (455)
T 3lpj_A 175 SNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTP 254 (455)
T ss_dssp CCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEE
T ss_pred CCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEe
Confidence 57899999999643 68999999999998999999753 2457999999999987 34555555
Q ss_pred CCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhcccccccC-CCCCcccccc
Q 010838 133 PFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRG-PDPNYDDICF 211 (499)
Q Consensus 133 ~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~-~~~~~~~~C~ 211 (499)
.....+|.|.+++|.|+++.+.++...+ ....++|||||++++||++++++|.++|.+..... .... ....+..+|+
T Consensus 255 ~~~~~~w~v~l~~i~v~g~~~~~~~~~~-~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~-~~~~~~~~g~~~~C~ 332 (455)
T 3lpj_A 255 IRREWYYEVIIVRVEINGQDLKMDCKEY-NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE-KFPDGFWLGEQLVCW 332 (455)
T ss_dssp CCSBTTBBCCEEEEEETTEECCCCGGGG-GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTS-CCCHHHHTTCSCEEE
T ss_pred cCCCceeEEEEeEEEECCEEcccccccc-CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcccc-ccCcccccCcceecc
Confidence 5567899999999999999988765433 24589999999999999999999999998875310 0000 0012356787
Q ss_pred CCCCcCcccccCCCCeEEEEEcCCe-----EEEeCCCCceEEeeecCC--cEEEEE-EEcCCCCeeecHHhhheEEEEEE
Q 010838 212 SGAGRDVSELSKTFPQVDMVFGNGQ-----KLTLSPENYLFRHMKVSG--AYCLGI-FQNSDSTTLLGGIVVRNTLVTYD 283 (499)
Q Consensus 212 ~~~~~~~~~~~~~~P~Itf~f~~g~-----~i~I~p~dYi~~~~~~~~--~~Cl~i-i~~~~~~~ILG~~FLr~~yvVFD 283 (499)
...... +..+|+|+|+|+++. +|+|+|++|+.+..+..+ ..|+++ +...++.||||++|||++|+|||
T Consensus 333 ~~~~~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD 408 (455)
T 3lpj_A 333 QAGTTP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFD 408 (455)
T ss_dssp STTCCC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEE
T ss_pred cccCCc----hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEE
Confidence 543221 236999999995543 699999999998765322 589973 23336789999999999999999
Q ss_pred CCCCEEEEEeccCCccc-ccccCCCCC
Q 010838 284 RGNDKVGFWKTNCSELW-RRLQLPSVP 309 (499)
Q Consensus 284 ~en~rIGFA~s~C~~~~-~~~~~~~~p 309 (499)
++++|||||+++|...+ ..+..+.+|
T Consensus 409 ~~~~rIGfA~~~c~~~~~~~i~~i~g~ 435 (455)
T 3lpj_A 409 RARKRIGFAVSACHVHDEFRTAAVEGP 435 (455)
T ss_dssp TTTTEEEEEEETTCCCCSSCCCEEEEE
T ss_pred CCCCEEEEEecccccccccCcceecCC
Confidence 99999999999998765 345544444
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.3e-38 Score=329.09 Aligned_cols=269 Identities=22% Similarity=0.352 Sum_probs=205.8
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCccccc-ceEEEEEEeecCCCC-CCCCceEEeeCCCCC--------ChHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQ-RAVFGCENLETGDLY-TQRADGIMGLGRGRL--------SVVDQL 91 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~-~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~--------S~~~qL 91 (499)
.|+|++.|++|+. +|.+++|+|+|++. ..+. .+.|+++....+.+. ....|||||||++.+ +++++|
T Consensus 73 ~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g--~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 73 RKGVYVPYTQGKW-EGELGTDLVSIPHG--PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEEECTTS--CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred CceEEEEECCcEE-EEEEEeEEEEECCC--CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 6999999999975 99999999999842 1222 367888776555443 356899999999653 588999
Q ss_pred HHcCCCCCcEEEeecCC----------CCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCcee
Q 010838 92 VEKGVISDSFSLCYGGM----------DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIF 160 (499)
Q Consensus 92 ~~~glI~n~FSl~L~~~----------~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f 160 (499)
+++++|+++||+||++. ...+|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.++...|
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~ 229 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 229 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcccc
Confidence 99999999999999863 1357999999999986 344555555567899999999999999887765444
Q ss_pred cCCCcEEEccCCceeeecHHHHHHHHHHHHHhhccccccc-CCCCCccccccCCCCcCcccccCCCCeEEEEEcCC----
Q 010838 161 DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR-GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNG---- 235 (499)
Q Consensus 161 ~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g---- 235 (499)
+ ...++|||||++++||+++|++|.++|.+..... ... +....+..+|+..... .+..+|+|+|+|+++
T Consensus 230 ~-~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~ 303 (395)
T 2qp8_A 230 N-YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE-KFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQ 303 (395)
T ss_dssp G-SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTS-CCCHHHHTTCSCEEESTTCC----CGGGSCCEEEEEECSSTTE
T ss_pred C-CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccc-cCCccccccccccccccccc----hHhhCCcEEEEEccCCCCc
Confidence 3 3579999999999999999999999998765311 000 0001124678754221 124799999999654
Q ss_pred -eEEEeCCCCceEEeeec--CCcEEEE-EEEcCCCCeeecHHhhheEEEEEECCCCEEEEEeccCCcc
Q 010838 236 -QKLTLSPENYLFRHMKV--SGAYCLG-IFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSEL 299 (499)
Q Consensus 236 -~~i~I~p~dYi~~~~~~--~~~~Cl~-ii~~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~C~~~ 299 (499)
.++.|+|++|+.+..+. ....|++ .+...++.||||++|||++|+|||++++|||||+++|...
T Consensus 304 ~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 304 SFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp EEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred eEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 37999999999886531 2358974 4444467899999999999999999999999999999964
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-38 Score=323.25 Aligned_cols=245 Identities=16% Similarity=0.291 Sum_probs=197.3
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~-~~~DGILGLG~~~~---------S~~~q 90 (499)
..|+|+++|++|+.++|.+++|+|++++ ++++++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 66 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 66 SGYSWDISYGDGSSASGDVYRDTVTVGG---VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp TTCBEEEECSSSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCEEEEEeCCCCEEEEEEEEeEEEECC---EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 4799999999998889999999999998 57889999999987765433 46899999999654 47899
Q ss_pred HHHcCCCCCcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 91 L~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
|+++ +-+++||+||.+. ..|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|+++.+. ..+..++|
T Consensus 143 l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~------~~~~~aii 213 (325)
T 1ibq_A 143 VKSQ-LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS------SSGFSAIA 213 (325)
T ss_dssp HGGG-SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB------SCCEEEEE
T ss_pred HHHh-cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc------CCCceEEE
Confidence 9987 3348999999873 57999999999986 3344444332 46799999999999998653 13458999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.++|..... ......+..+|+ ..+|+|+|+| +|.++.|++++|++.
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~ 276 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQE-----SYEAGGYVFSCS-----------TDLPDFTVVI-GDYKAVVPGKYINYA 276 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCBC-----CSSSSSCEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCceE-----cCcCCeEEEEcC-----------CCCCcEEEEE-CCEEEEECHHHhccc
Confidence 99999999999999999988743211 011223445664 3789999999 899999999999987
Q ss_pred eeecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
..+.+...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 277 ~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 277 PVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp ESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 6432347999977664 578999999999999999999999999986
No 29
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2e-38 Score=337.50 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=202.9
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEe----ecCCCCCCCCceEEeeCCCCC------ChHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENL----ETGDLYTQRADGIMGLGRGRL------SVVDQ 90 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~----~s~~~~~~~~DGILGLG~~~~------S~~~q 90 (499)
..|+|.+.|++|+ ++|.+++|+|++++ ++++ +.|||++. +++ +.....|||||||++.+ +++++
T Consensus 192 ~~~~f~i~YgdGs-~~G~~~~Dtv~igg---~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~ 265 (451)
T 3qvc_A 192 DDTPVKLTSKAGT-ISGIFSKDLVTIGK---LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVE 265 (451)
T ss_dssp EEEEEEEECSSEE-EEEEEEEEEEEETT---EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHH
T ss_pred CCCEEEEEECCCE-EEEEEEEEEEEECC---EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHH
Confidence 4799999999997 89999999999998 5777 99999988 555 44456899999999764 68999
Q ss_pred HHHcCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 91 LVEKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 91 L~~~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
|+++|+|+ ++||+||++.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++ . .....++|
T Consensus 266 L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~-~-------~~~~~aii 336 (451)
T 3qvc_A 266 LKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV-S-------SKKANVIL 336 (451)
T ss_dssp HHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE-E-------EEEEEEEE
T ss_pred HHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc-c-------CCCceEEE
Confidence 99999998 89999999876668999999999987 44556665667889999999 999998 1 12458999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.+++.+... .....|..+|. ...+|+|+|+| +|.+++|+|++|+.+
T Consensus 337 DSGTt~i~lP~~~~~~i~~~i~a~~~------~~~g~y~v~C~----------~~~~P~itf~f-gg~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 337 DSATSVITVPTEFFNQFVESASVFKV------PFLSLYVTTCG----------NTKLPTLEYRS-PNKVYTLEPKQYLEP 399 (451)
T ss_dssp CTTBSSEEECHHHHHHHHTTTTCEEC------TTSSCEEEETT----------CTTCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCccccCCHHHHHHHHHHcCCeec------CCCCeEEeeCC----------cCcCCcEEEEE-CCEEEEEcHHHheee
Confidence 99999999999999999988854321 11233455663 25899999999 899999999999998
Q ss_pred eeecCCcEEEEEEEcC---CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 249 HMKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~---~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
..+.++..|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 400 ~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 400 LENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 7544467999877765 3679999999999999999999999999974
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.1e-38 Score=320.98 Aligned_cols=266 Identities=18% Similarity=0.267 Sum_probs=204.7
Q ss_pred CcccccCCCCCCCCCC--CCCCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCCceEEee
Q 010838 3 NTYQALKCNPDCNCDN--DRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGL 80 (499)
Q Consensus 3 sTy~~v~C~~~C~C~~--~~~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~~~~DGILGL 80 (499)
|+.-+|.|.+..++.+ ....|+|.+.|++|+ ++|.+++|+|+|++ ++++++.|||++.+.+ +. .+||||||
T Consensus 35 Ss~lWv~~~~~y~~s~Ss~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~---~~v~~~~fg~~~~~~~-~~--~~~GilGL 107 (340)
T 1wkr_A 35 SSNTWLGADKSYVKTSTSSATSDKVSVTYGSGS-FSGTEYTDTVTLGS---LTIPKQSIGVASRDSG-FD--GVDGILGV 107 (340)
T ss_dssp CCCCEECSSSCCCCCTTCEEEEEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEEES-CT--TCSEEEEC
T ss_pred ChhheecCCCccCCcCCccccCceEEEEECCcE-EEEEEEEEEEEECC---EEEcceEEEEEEccCC-Cc--CCCcEEEC
Confidence 3444577764322211 134799999999997 79999999999998 5788999999998765 32 58999999
Q ss_pred CCCCC--------------ChHHHHHHcCCCC-CcEEEeecCC---CCCCceEEECCCCCCC-CceeeeeCCCC----CC
Q 010838 81 GRGRL--------------SVVDQLVEKGVIS-DSFSLCYGGM---DVGGGAMVLGGITPPP-DMVFSHSDPFR----SP 137 (499)
Q Consensus 81 G~~~~--------------S~~~qL~~~glI~-n~FSl~L~~~---~~~~G~I~fGgiD~s~-~~~~~~~~~~~----~~ 137 (499)
|++.+ +++++|+++|+|+ ++||+||.+. ....|.|+|||+|+++ ...+.|.+... ..
T Consensus 108 g~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~ 187 (340)
T 1wkr_A 108 GPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASA 187 (340)
T ss_dssp SCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGG
T ss_pred CccccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcc
Confidence 98653 5799999999998 8999999864 2347999999999876 33444443333 57
Q ss_pred ceEEEEeEEEEcC-EEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCc
Q 010838 138 YYNIELKELRVAG-KPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGR 216 (499)
Q Consensus 138 ~w~V~l~~I~Vgg-~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~ 216 (499)
+|.|. ++|.|++ +.+.. +..++|||||++++||++++++|.+++.+... .....+..+|.
T Consensus 188 ~w~v~-~~i~v~~~~~l~~-------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g~~~~~C~----- 248 (340)
T 1wkr_A 188 YWGIN-QSIRYGSSTSILS-------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTGLLRLTTA----- 248 (340)
T ss_dssp SSEEE-EEEEETTTEEEEE-------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTSSEEECHH-----
T ss_pred eEEEE-eeEEECCCeEccC-------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCCeEEeecc-----
Confidence 99999 9999998 76641 24799999999999999999999888854322 11223445553
Q ss_pred CcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeec-----CCcEEEEEEEcC------CCCeeecHHhhheEEEEEECC
Q 010838 217 DVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV-----SGAYCLGIFQNS------DSTTLLGGIVVRNTLVTYDRG 285 (499)
Q Consensus 217 ~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~-----~~~~Cl~ii~~~------~~~~ILG~~FLr~~yvVFD~e 285 (499)
.. ..+|+|+|.| +|.++.|+|++|+++.... ....|+..+... +..||||++|||++|+|||++
T Consensus 249 ---~~-~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~ 323 (340)
T 1wkr_A 249 ---QY-ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTT 323 (340)
T ss_dssp ---HH-HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETT
T ss_pred ---cc-ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCC
Confidence 22 4789999999 8899999999999775421 135677655431 246999999999999999999
Q ss_pred CCEEEEEeccCCcc
Q 010838 286 NDKVGFWKTNCSEL 299 (499)
Q Consensus 286 n~rIGFA~s~C~~~ 299 (499)
++|||||+++|.+.
T Consensus 324 ~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 324 NKRLGLATTSFTTA 337 (340)
T ss_dssp TTEEEEEECTTTTC
T ss_pred CCeEEEEecCCCCC
Confidence 99999999999864
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=8.9e-38 Score=318.59 Aligned_cols=242 Identities=14% Similarity=0.237 Sum_probs=195.8
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCC-CCCCceEEeeCCCCC---------ChHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLY-TQRADGIMGLGRGRL---------SVVDQ 90 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~-~~~~DGILGLG~~~~---------S~~~q 90 (499)
..|+|+++|++|+.++|.+++|+|+|++ ++++++.|||++.+++.+. ....|||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 143 (323)
T 1izd_A 67 DGATWSISYGDGSSASGDVYKDKVTVGG---VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDN 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEcCCCCeEEEEEEEEEEEECC---EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHH
Confidence 3699999999998889999999999998 5788999999998866443 246899999999654 47899
Q ss_pred HHHcCCCCCcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 91 L~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
|+++ +-+++||+||.+. ..|.|+|||+|+++ ...+.|.+.. ...+|.|++++|.|++ .+. ..+..++|
T Consensus 144 l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~------~~~~~aii 213 (323)
T 1izd_A 144 VKSS-LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS------SDSITGIA 213 (323)
T ss_dssp HGGG-SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE------CCCEEEEE
T ss_pred HHHh-ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc------CCCceEEE
Confidence 9987 4349999999873 57999999999987 3444554443 5679999999999999 442 23568999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.++|..... ......+..+|+ ..+|+|+|+| +|.+++|++++|++.
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~i~~~~~~~~ 276 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGASY-----DSSQGGYVFPSS-----------ASLPDFSVTI-GDYTATVPGEYISFA 276 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcEE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEecCHHHeEEe
Confidence 99999999999999999988742211 111223445563 3789999999 899999999999987
Q ss_pred eeecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
.. ++..|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 277 ~~--~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 277 DV--GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EC--STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cC--CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 63 367999976654 578999999999999999999999999986
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=8.4e-38 Score=318.60 Aligned_cols=242 Identities=15% Similarity=0.287 Sum_probs=194.5
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCC-CCCceEEeeCCCCC---------ChHHH
Q 010838 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYT-QRADGIMGLGRGRL---------SVVDQ 90 (499)
Q Consensus 21 ~~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~~~~-~~~DGILGLG~~~~---------S~~~q 90 (499)
..|+|+++|++|+.++|.+++|+|++++ ++++++.|||++.+++.+.. ...|||||||++.+ +++++
T Consensus 67 ~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~---~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 143 (323)
T 1bxo_A 67 SGYTWSISYGDGSSASGNVFTDSVTVGG---VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDT 143 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CCCeEEEEeCCCCeEEEEEEEEEEEECC---EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHH
Confidence 4699999999998889999999999998 57889999999987665433 46899999999643 58899
Q ss_pred HHHcCCCCCcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCC-CCCceEEEEeEEEEcCEEeecCCceecCCCcEEE
Q 010838 91 LVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPF-RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVL 168 (499)
Q Consensus 91 L~~~glI~n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~-~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aiv 168 (499)
|+++ +-+++||+||.+. .+|.|+|||+|+++ ...+.|.+.. ...+|.|.+++|.|++ +. ..+..++|
T Consensus 144 l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~------~~~~~aii 212 (323)
T 1bxo_A 144 VKSS-LAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QS------GDGFSGIA 212 (323)
T ss_dssp HGGG-BSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EE------EEEEEEEE
T ss_pred HHHh-cCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--cc------CCCceEEE
Confidence 9987 3348999999873 57999999999986 3344444332 4679999999999999 21 13458999
Q ss_pred ccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEE
Q 010838 169 DSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFR 248 (499)
Q Consensus 169 DSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~ 248 (499)
||||++++||++++++|.++|..... ......|..+|+ ..+|+|+|+| +|.+++|++++|++.
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~f-gg~~~~l~~~~~~~~ 275 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQQ-----DSNAGGYVFDCS-----------TNLPDFSVSI-SGYTATVPGSLINYG 275 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCEE-----ETTTTEEEECTT-----------CCCCCEEEEE-TTEEEEECHHHHEEE
T ss_pred eCCCCceeCCHHHHHHHHHhCCCceE-----cCcCCEEEEECC-----------CCCceEEEEE-CCEEEEECHHHeEEe
Confidence 99999999999999999988743211 111223445564 3789999999 899999999999987
Q ss_pred eeecCCcEEEEEEEcC--CCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 249 HMKVSGAYCLGIFQNS--DSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 249 ~~~~~~~~Cl~ii~~~--~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
..+ +...|++.+... .+.||||++|||++|+|||++++|||||++
T Consensus 276 ~~~-~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 276 PSG-DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp ECS-SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccC-CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 643 347899977664 578999999999999999999999999986
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.5e-38 Score=333.07 Aligned_cols=242 Identities=23% Similarity=0.304 Sum_probs=198.9
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeec--CC-CCCCCCceEEeeCCCCC------ChHHHHH
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLET--GD-LYTQRADGIMGLGRGRL------SVVDQLV 92 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s--~~-~~~~~~DGILGLG~~~~------S~~~qL~ 92 (499)
.|+|++.|++|+ ++|.+++|+|++++ ++++ +.|||++.++ +. +.....|||||||++.+ +++++|+
T Consensus 194 ~~~~~i~YgdGs-~~G~~~~Dtv~ig~---~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~ 268 (453)
T 2bju_A 194 GTKVEMNYVSGT-VSGFFSKDLVTVGN---LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELK 268 (453)
T ss_dssp EEEEEEECSSSE-EEEEEEEEEEEETT---EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHH
T ss_pred CcEEEEEcCCCC-eEEEEEEEEEEEeC---cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHH
Confidence 689999999997 79999999999998 5777 9999999887 54 33456899999999754 5899999
Q ss_pred HcCCCC-CcEEEeecCCCCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEcc
Q 010838 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (499)
Q Consensus 93 ~~glI~-n~FSl~L~~~~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDS 170 (499)
++|+|+ ++||+||++.+..+|.|+|||+|+++ ...+.|.+.....+|.|.++ |.|+++ + . .+..++|||
T Consensus 269 ~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg~-~-~------~~~~aIiDS 339 (453)
T 2bju_A 269 NQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNI-M-L------EKANCIVDS 339 (453)
T ss_dssp HTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETTE-E-E------EEEEEEECT
T ss_pred HCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECcE-E-e------ccccEEEcC
Confidence 999997 89999999865568999999999986 34455544445689999999 999993 3 1 245899999
Q ss_pred CCceeeecHHHHHHHHHHHHHhhcccccccCCCC-CccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEe
Q 010838 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDP-NYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRH 249 (499)
Q Consensus 171 GTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~ 249 (499)
||++++||++++++|.+++.+.. .... .|..+|+. ..+|+|+|+| +|.+++|+|++|+++.
T Consensus 340 GTsl~~lP~~~~~~l~~~i~~~~-------~~~g~~~~v~C~~----------~~~P~itf~f-gg~~~~l~~~~yi~~~ 401 (453)
T 2bju_A 340 GTSAITVPTDFLNKMLQNLDVIK-------VPFLPFYVTLCNN----------SKLPTFEFTS-ENGKYTLEPEYYLQHI 401 (453)
T ss_dssp TCCSEEECHHHHHHHTTTSSCEE-------CTTSSCEEEETTC----------TTCCCEEEEC-SSCEEEECHHHHEEEC
T ss_pred CCCeEecCHHHHHHHHHHhCCcc-------cCCCceEEEecCC----------CCCCcEEEEE-CCEEEEECHHHhEeec
Confidence 99999999999999998874421 1122 45567742 3799999999 8999999999999987
Q ss_pred eecCCcEEEEEEEcC---CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 250 MKVSGAYCLGIFQNS---DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 250 ~~~~~~~Cl~ii~~~---~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
...+...|+..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 402 ~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 402 EDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp TTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 532356999777665 3589999999999999999999999999874
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.7e-36 Score=294.63 Aligned_cols=222 Identities=24% Similarity=0.434 Sum_probs=180.9
Q ss_pred ccccceEEEEEEeecCC-CCCCCCceEEeeCCCCC------ChHHHHHHcCCCC-CcEEEeecCCCCC--CceEEECCCC
Q 010838 52 LVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRL------SVVDQLVEKGVIS-DSFSLCYGGMDVG--GGAMVLGGIT 121 (499)
Q Consensus 52 iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~------S~~~qL~~~glI~-n~FSl~L~~~~~~--~G~I~fGgiD 121 (499)
++++++.|||++.+++. +....+|||||||++.+ +++++|+++|+|+ ++||+||.+.... +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 57889999999988765 44567899999999764 5899999999998 8999999986433 8999999999
Q ss_pred CCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhccccccc
Q 010838 122 PPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIR 200 (499)
Q Consensus 122 ~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~ 200 (499)
+++ ...+.|.+.....+|.|.+++|.|+++.+. ...+..++|||||+++++|++++++|.+++.+...
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-----~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------ 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-----CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL------ 151 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-----STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEe-----ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec------
Confidence 987 345556555567899999999999998642 12356899999999999999999999999854321
Q ss_pred CCCCCccccccCCCCcCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeecCCcEEEEEEEcC------CCCeeecHHh
Q 010838 201 GPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS------DSTTLLGGIV 274 (499)
Q Consensus 201 ~~~~~~~~~C~~~~~~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~~~~~Cl~ii~~~------~~~~ILG~~F 274 (499)
....|..+|+. . ..+|+|+|+| +|++++|+|++|+++..+.++..|+..+... .+.||||++|
T Consensus 152 -~~g~~~~~C~~--------~-~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 152 -IQGEYMIPCEK--------V-STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp -ETTEEEEEGGG--------G-GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred -cCCcEEEECCC--------C-ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 12234556742 2 4799999999 8999999999999987543457999866542 4689999999
Q ss_pred hheEEEEEECCCCEEEEEecc
Q 010838 275 VRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 275 Lr~~yvVFD~en~rIGFA~s~ 295 (499)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999863
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.93 E-value=2.1e-25 Score=217.98 Aligned_cols=161 Identities=21% Similarity=0.313 Sum_probs=135.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCC-CCCCCCceEEeeCCCCCC--hHHHHHHcCCCC
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGD-LYTQRADGIMGLGRGRLS--VVDQLVEKGVIS 98 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg~s~iti~~~~FG~~~~~s~~-~~~~~~DGILGLG~~~~S--~~~qL~~~glI~ 98 (499)
.|+|++.|++|+ ++|.+++|+|++++ ++++++.|||+.++.+. +....+|||||||++.++ ++++|+++|+|+
T Consensus 70 ~~~~~i~Yg~Gs-~~G~~~~D~v~~g~---~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~ 145 (239)
T 1b5f_A 70 GTFGAIIYGTGS-ITGFFSQDSVTIGD---LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVK 145 (239)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEETT---EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCS
T ss_pred CcEEEEEECCCc-EEEEEEEEEEEECC---cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCC
Confidence 589999999997 79999999999998 57889999999887643 445578999999998875 788999999998
Q ss_pred -CcEEEeecCC--CCCCceEEECCCCCCC-CceeeeeCCCCCCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCce
Q 010838 99 -DSFSLCYGGM--DVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTY 174 (499)
Q Consensus 99 -n~FSl~L~~~--~~~~G~I~fGgiD~s~-~~~~~~~~~~~~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~ 174 (499)
++||+||.+. ....|.|+|||+|+++ ...+.|.+.....+|.|.+++|.|+++.+.+.. .+..++|||||++
T Consensus 146 ~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~----~~~~aiiDTGTt~ 221 (239)
T 1b5f_A 146 ERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCA----PGCQAFADSGTSL 221 (239)
T ss_dssp SSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTT----TCEEEEECTTCSS
T ss_pred CCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccC----CCCEEEEecCcch
Confidence 8999999874 2457999999999987 334445444456799999999999999876532 3468999999999
Q ss_pred eeecHHHHHHHHHHHH
Q 010838 175 AYLPGHAFAAFKDALI 190 (499)
Q Consensus 175 i~LP~~v~~~l~~aI~ 190 (499)
++||++++++|.++|.
T Consensus 222 ~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 222 LSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEECHHHHHHHHHHTT
T ss_pred hhCCHHHHHHHHHHhC
Confidence 9999999999999874
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=6.3e-16 Score=127.56 Aligned_cols=72 Identities=28% Similarity=0.529 Sum_probs=62.7
Q ss_pred CCCCeEEEEEcCCeEEEeCCCCceEEeeecCCcEEEEEEEcC-----CCCeeecHHhhheEEEEEECCCCEEEEEecc
Q 010838 223 KTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS-----DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTN 295 (499)
Q Consensus 223 ~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~~~~~Cl~ii~~~-----~~~~ILG~~FLr~~yvVFD~en~rIGFA~s~ 295 (499)
+++|+|+|+| +|++++|+|++|+++....+...|++.+... ++.||||+.|||++|+|||++++|||||+++
T Consensus 11 ~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 11 SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 4799999999 8999999999999987543457999877652 4679999999999999999999999999863
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=96.09 E-value=0.0043 Score=51.51 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=24.4
Q ss_pred CceEEEEeCCCceEEEEEEEEEEEeCC
Q 010838 22 ECIYERRYAEMSTSSGVLGVDVISFGN 48 (499)
Q Consensus 22 ~C~y~i~Y~dGss~sG~l~~DtVsigg 48 (499)
.|.|.+.|++|+ ++|.+++|+|+|++
T Consensus 71 ~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 699999999997 79999999999987
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.14 Score=45.01 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=25.0
Q ss_pred CCeeecHHhhheEEEEEECCCCEEEEE
Q 010838 266 STTLLGGIVVRNTLVTYDRGNDKVGFW 292 (499)
Q Consensus 266 ~~~ILG~~FLr~~yvVFD~en~rIGFA 292 (499)
...|||..||+++-+++|..++++-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 358999999999999999999999996
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.22 E-value=0.088 Score=47.01 Aligned_cols=113 Identities=19% Similarity=0.274 Sum_probs=64.4
Q ss_pred CCceEEEEeEEEEcCEEeecCCceecCCCcEEEccCCceeeecHHHHHHHHHHHHHhhcccccccCCCCCccccccCCCC
Q 010838 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAG 215 (499)
Q Consensus 136 ~~~w~V~l~~I~Vgg~~l~l~~~~f~~~~~aivDSGTs~i~LP~~v~~~l~~aI~~~v~~~~~~~~~~~~~~~~C~~~~~ 215 (499)
...+.|+ +.|||+.+ .++||||++.+.++.+..+.+- +..... .+..+ .. .+.+
T Consensus 22 ~~~l~v~---~~Ing~~v-----------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~--~~~~~------~a--~g~G 75 (148)
T 3s8i_A 22 VTMLYIN---CKVNGHPL-----------KAFVDSGAQMTIMSQACAERCN--IMRLVD--RRWAG------VA--KGVG 75 (148)
T ss_dssp CCCCEEE---EEETTEEE-----------EEEECTTCSSCEEEHHHHHHTT--CGGGEE--GGGCE------EC--CC--
T ss_pred cCEEEEE---EEECCEEE-----------EEEEeCCCCcEeeCHHHHHHcC--CccccC--cceeE------EE--EcCC
Confidence 3345555 44788866 5799999999999999887762 100000 00000 00 0000
Q ss_pred cCcccccCCCCeEEEEEcCCeEEEeCCCCceEEeeecCCcEEEEEEE-cCCCCeeecHHhhheEEEEEECCCCEEEEEec
Q 010838 216 RDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQ-NSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (499)
Q Consensus 216 ~~~~~~~~~~P~Itf~f~~g~~i~I~p~dYi~~~~~~~~~~Cl~ii~-~~~~~~ILG~~FLr~~yvVFD~en~rIGFA~s 294 (499)
-.......+...+.+ ++..+. |-..+. ..+...|||..||+++-.+.|..++++-|...
T Consensus 76 --~~~~~g~v~~~~I~I-g~~~~~-----------------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 76 --TQRIIGRVHLAQIQI-EGDFLQ-----------------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp ---CEEEEEEEEEEEEE-TTEEEE-----------------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred --ccEEEEEEEEEEEEE-CCEEEE-----------------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 000001233445555 443321 222222 22445899999999999999999999999754
No 40
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=38.79 E-value=50 Score=29.27 Aligned_cols=50 Identities=12% Similarity=0.218 Sum_probs=40.5
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeecC
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (499)
....++-+ ++.+=.....|.|+..+.-+.||+-|+++.+||.+=--|..+
T Consensus 87 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E~ 136 (152)
T 1iv3_A 87 RGAKLLQA--SLVLTLDRPKLGPHRKALVDSLSRLMRLPQDRIGLTFKTSEG 136 (152)
T ss_dssp TTCCEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEE--EEEEEecCCcCHHHHHHHHHHHHHHhCCCCceEEEEEecCCC
Confidence 45667764 445556889999999999999999999999999986666544
No 41
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=38.60 E-value=50 Score=29.58 Aligned_cols=49 Identities=12% Similarity=0.294 Sum_probs=39.5
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeec
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (499)
....++- +++.+-.....|+|+..+.-+.||+.|+++..||.+=--|..
T Consensus 93 ~G~~i~N--vD~tii~q~PKl~p~~~~m~~~la~~L~~~~~~V~vKAtT~E 141 (162)
T 3re3_A 93 KQYSISN--IDCTIIAQAPKMLPHIEKMRACLANILEIQISQINIKATTTE 141 (162)
T ss_dssp TTCEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHHTSCGGGEEEEEECCS
T ss_pred cCCEEEE--EEEEEEcCCCcchhHHHHHHHHHHHHHCCCCceEEEEEecCC
Confidence 3455665 555666788999999999999999999999999998555543
No 42
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=37.83 E-value=52 Score=29.40 Aligned_cols=49 Identities=18% Similarity=0.333 Sum_probs=39.1
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeec
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (499)
.+..++-+ ++.+-.....|.|+..+.-+.||+-|+++.+||.+=--|.+
T Consensus 90 ~G~~i~Nv--D~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 138 (160)
T 2pmp_A 90 AGYEIGNL--DATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHE 138 (160)
T ss_dssp HTEEEEEE--EEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred cCCEEEEE--EEEEEecCCcCHHHHHHHHHHHHHHHCCCcceEEEEEecCC
Confidence 35667764 44555689999999999999999999999999998544443
No 43
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=37.63 E-value=54 Score=29.33 Aligned_cols=48 Identities=17% Similarity=0.365 Sum_probs=38.9
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeee
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSS 390 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (499)
.+..++-+. +.+-.....|.|+..+.-+.||+-|+++.+||.+=--|.
T Consensus 88 ~G~~i~NvD--~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~ 135 (160)
T 1gx1_A 88 KGYTLGNVD--VTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTT 135 (160)
T ss_dssp TTCEEEEEE--EEEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECC
T ss_pred cCCEEEEEE--EEEEcCCCcchHHHHHHHHHHHHHhCCCCceEEEEEccC
Confidence 456677644 445588999999999999999999999999999954444
No 44
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=37.26 E-value=55 Score=29.23 Aligned_cols=49 Identities=14% Similarity=0.427 Sum_probs=39.6
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeec
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (499)
.+..++-+. +.+-.....|.|+..+.-+.||+-|+++.+||.+=--|..
T Consensus 89 ~G~~i~NvD--~tii~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 137 (159)
T 1t0a_A 89 KGFELGNLD--VTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTE 137 (159)
T ss_dssp TTEEEEEEE--EEEECSSSCCGGGHHHHHHHHHHHTTCCGGGEEEEEECCT
T ss_pred cCCEEEEEE--EEEEcCCCcChHHHHHHHHHHHHHhCCCCceEEEEEecCC
Confidence 456777654 4445889999999999999999999999999998555544
No 45
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=34.58 E-value=5.2 Score=25.64 Aligned_cols=15 Identities=27% Similarity=0.844 Sum_probs=11.7
Q ss_pred HHHHHhhheeeeeec
Q 010838 483 RLLIIIHGFFAICWL 497 (499)
Q Consensus 483 ~~~~~~~~~~~~~~~ 497 (499)
|.++++=+.|++||+
T Consensus 6 k~l~~vv~~F~icW~ 20 (33)
T 2ki9_A 6 KTLGLVLAVLLICWF 20 (33)
T ss_dssp SHHHHHHHHHTTTSS
T ss_pred hhHHHHHHHHHHHHh
Confidence 456667788999997
No 46
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=33.44 E-value=66 Score=29.36 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=39.7
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeec
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSK 391 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (499)
.+..++- +++.+-.....|+|+..+.-+.||+.|+++..||.+=--|..
T Consensus 110 ~G~~I~N--vD~tIiaq~PKl~p~~~~mr~~la~~L~i~~~~VnVKATT~E 158 (183)
T 3f0d_A 110 AGFAIRN--VDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNE 158 (183)
T ss_dssp TTEEEEE--EEEEEECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred cCCEEEE--EEEEEEcCCCcchhHHHHHHHHHHHHHCCCcceEEEEEecCC
Confidence 4566665 555666788999999999999999999999999998555544
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=30.20 E-value=44 Score=26.82 Aligned_cols=16 Identities=25% Similarity=0.609 Sum_probs=14.3
Q ss_pred cEEEccCCceeeecHH
Q 010838 165 GTVLDSGTTYAYLPGH 180 (499)
Q Consensus 165 ~aivDSGTs~i~LP~~ 180 (499)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 6899999999999964
No 48
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=26.52 E-value=25 Score=25.97 Aligned_cols=23 Identities=26% Similarity=0.047 Sum_probs=19.1
Q ss_pred CCChhhhHHHHHhhhccccceEE
Q 010838 362 KPNFTELSEFIAHELQVDDIEVH 384 (499)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~ 384 (499)
++..++.+..+|.|++||+++|.
T Consensus 7 ~v~aSPaaRrlA~e~gIdl~~V~ 29 (58)
T 3rnm_E 7 KTLATPAVRNLAMENNIKLSEVV 29 (58)
T ss_dssp -CCCCHHHHHHHHHTTCCGGGCC
T ss_pred CcCcCHHHHHHHHHcCCCHHHCC
Confidence 34567899999999999999874
No 49
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=25.60 E-value=34 Score=29.43 Aligned_cols=36 Identities=6% Similarity=0.193 Sum_probs=30.8
Q ss_pred CCChhhhHHHHHhhhccccceEEEEEeeecCCceEE
Q 010838 362 KPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDYLV 397 (499)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (499)
+-.+.+|.+.||.+|+++..+++|-.|..-.|...+
T Consensus 65 ~~~~~~~~~~va~~lg~~~~~~RlW~~~~RqN~T~R 100 (130)
T 2kvr_A 65 NSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKR 100 (130)
T ss_dssp TSBHHHHHHHHHHHHCCCGGGCEEEECCCCBTTBCC
T ss_pred cCcHHHHHHHHHHHhCCCcccEEEEEeecCCCCCCC
Confidence 346889999999999999999999888877777654
No 50
>3b6n_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; malaria isoprenoid biosynthesis and prenylation pathways ISPF; 2.26A {Plasmodium vivax sai-1}
Probab=23.14 E-value=90 Score=28.53 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=39.9
Q ss_pred CceeeeeEEEEEEeeecCCCCCCChhhhHHHHHhhhccccceEEEEEeeecC
Q 010838 341 GAFQIGVITFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKG 392 (499)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (499)
.+..+|-+.+ .+=.....|.|+..+.-+.||+-|+++.+||.+=-=|..+
T Consensus 115 ~Gy~I~NvD~--tiiaq~PKi~p~~~~m~~nia~~L~i~~~~VnVKAtT~E~ 164 (187)
T 3b6n_A 115 RNYAIANVDI--IVIAEVPKISPIREEIVRNISSALGISESQVSLKGKTHEQ 164 (187)
T ss_dssp TTEEEEEEEE--EEECSSSCSHHHHHHHHHHHHHHHTCCGGGEEEEEECCTT
T ss_pred cCCEEEEEEE--EEEeCCCcchHHHHHHHHHHHHHhCCCcceEEEEEecCCC
Confidence 3567776544 4457889999999999999999999999999995555443
Done!