Query 010841
Match_columns 499
No_of_seqs 242 out of 958
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:23:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010841.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010841hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 99.9 2.5E-26 8.4E-31 227.8 10.2 230 34-369 21-264 (279)
2 3hve_A Gigaxonin; ubiquitin, c 99.9 3.6E-26 1.2E-30 223.7 6.2 181 34-268 20-206 (256)
3 3htm_A Speckle-type POZ protei 99.9 8.1E-23 2.8E-27 187.2 10.5 149 28-194 17-166 (172)
4 2if5_A Zinc finger and BTB dom 99.9 9.7E-23 3.3E-27 177.4 8.3 106 34-147 14-120 (120)
5 2vkp_A BTB/POZ domain-containi 99.9 1.2E-22 4E-27 173.5 8.4 103 39-150 2-109 (109)
6 3b84_A Zinc finger and BTB dom 99.9 6.4E-23 2.2E-27 179.1 6.1 105 34-149 13-117 (119)
7 1r29_A B-cell lymphoma 6 prote 99.9 1.9E-22 6.4E-27 177.4 9.1 106 34-148 18-125 (127)
8 2vpk_A Myoneurin; transcriptio 99.9 1.5E-22 5.2E-27 175.4 8.3 104 34-148 11-116 (116)
9 4eoz_A Speckle-type POZ protei 99.9 4.7E-23 1.6E-27 183.8 4.6 128 32-176 12-140 (145)
10 1buo_A POZ domain, protein (pr 99.9 2.4E-22 8.2E-27 175.8 8.5 105 33-149 16-120 (121)
11 2yy9_A Zinc finger and BTB dom 99.9 9.3E-23 3.2E-27 182.2 5.3 107 34-151 14-120 (135)
12 2z8h_A Transcription regulator 99.9 2.8E-22 9.5E-27 179.4 7.7 113 32-153 23-136 (138)
13 3ga1_A Nucleus accumbens-assoc 99.9 2E-22 6.9E-27 178.2 5.5 105 34-149 22-127 (129)
14 2q81_A MIZ-1 protein; BTB/POZ 99.9 2.6E-22 8.8E-27 175.3 6.0 102 34-147 16-117 (119)
15 3ohu_A Transcription regulator 99.9 1.6E-22 5.4E-27 177.4 4.4 105 33-146 20-125 (125)
16 2ppi_A Gigaxonin; BTB domain, 99.9 3.4E-22 1.2E-26 180.8 6.4 107 33-147 35-144 (144)
17 2ihc_A Transcription regulator 99.8 4.5E-22 1.6E-26 174.9 4.3 107 32-147 16-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 1.6E-21 5.5E-26 171.4 6.6 94 39-148 24-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 2.7E-20 9.3E-25 186.7 9.2 136 34-186 163-302 (312)
20 3fkc_A Transcriptional regulat 99.8 9.3E-20 3.2E-24 158.9 7.1 92 34-131 20-112 (116)
21 2ast_A S-phase kinase-associat 99.4 8E-14 2.7E-18 128.4 6.7 96 48-152 3-128 (159)
22 4ajy_C Transcription elongatio 99.3 6.7E-12 2.3E-16 106.5 7.0 79 48-129 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 6.9E-11 2.4E-15 106.9 6.9 93 48-152 4-123 (141)
24 2p1m_A SKP1-like protein 1A; F 99.0 8E-11 2.7E-15 108.6 0.7 94 48-152 6-127 (160)
25 1hv2_A Elongin C, ELC1; protei 98.4 3.2E-07 1.1E-11 78.1 6.3 80 47-129 5-99 (99)
26 2fnj_C Transcription elongatio 98.4 3.7E-07 1.3E-11 77.3 5.5 79 48-129 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.3 9.6E-07 3.3E-11 82.1 7.0 96 47-151 8-134 (169)
28 1vcb_B Protein (elongin C); tu 97.7 2.1E-05 7.2E-10 68.4 4.7 80 47-129 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.6 0.00012 4.2E-09 62.8 7.7 93 47-148 7-106 (107)
30 3drx_A BTB/POZ domain-containi 96.2 0.0086 2.9E-07 57.2 7.0 94 47-149 13-113 (202)
31 3kvt_A Potassium channel prote 95.4 0.0054 1.9E-07 53.4 2.0 82 48-132 7-92 (115)
32 1s1g_A Potassium voltage-gated 93.9 0.049 1.7E-06 48.0 4.3 81 46-132 13-99 (124)
33 1t1d_A Protein (potassium chan 93.7 0.053 1.8E-06 46.0 4.1 81 48-131 3-88 (100)
34 1nn7_A Potassium channel KV4.2 92.2 0.051 1.7E-06 46.3 1.8 85 48-143 2-92 (105)
35 2nz0_B Potassium voltage-gated 92.1 0.058 2E-06 48.5 2.2 82 45-132 34-121 (140)
36 2eqx_A Kelch repeat and BTB do 89.8 0.24 8.3E-06 41.6 3.7 36 231-269 46-81 (105)
37 1pd7_B MAD1; PAH2, SIN3, eukar 66.8 1.3 4.4E-05 28.5 0.2 17 115-131 3-19 (26)
38 2r9r_B Paddle chimera voltage 65.8 4.9 0.00017 42.9 4.6 83 47-132 53-140 (514)
39 1vjh_A BET V I allergen family 50.8 7.8 0.00027 33.3 2.4 33 453-496 90-122 (122)
40 3ie5_A Phenolic oxidative coup 28.8 19 0.00067 32.6 1.5 17 482-498 148-164 (165)
41 4a8u_A Major pollen allergen B 26.0 23 0.0008 31.6 1.5 17 482-498 142-158 (159)
42 3rws_A MTN13 protein; zeatin, 24.2 25 0.00087 31.9 1.3 17 482-498 148-164 (168)
43 3b0b_C CENP-X, centromere prot 23.9 47 0.0016 26.9 2.7 43 390-453 5-47 (81)
44 2qim_A PR10.2B; trans-zeatin, 21.9 31 0.001 30.6 1.4 35 454-496 122-156 (158)
45 3htm_A Speckle-type POZ protei 21.2 55 0.0019 28.4 2.9 46 96-150 119-164 (172)
46 1e09_A PRU AV 1; allergen, maj 20.1 36 0.0012 30.1 1.5 38 453-498 121-158 (159)
47 3lvg_A Clathrin heavy chain 1; 20.1 34 0.0012 37.2 1.4 31 463-498 338-368 (624)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.93 E-value=2.5e-26 Score=227.77 Aligned_cols=230 Identities=11% Similarity=0.163 Sum_probs=175.6
Q ss_pred cchhhhhhcCCCeeEEEEEC---CEEEEeccccccccCHHHHHhhcCC-CCCCCceEEcc------CCCCCHHHHHHHHH
Q 010841 34 RGQSWYVATDIPSDFLVQIG---DVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLD------DLPGGPEAFELAAK 103 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~---~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~------~~pgga~afell~~ 103 (499)
++.+.+|.+|.+|||+|.|+ |+.|++||.+|+++|+||++||+++ +|+.+.+|+|+ +++ +++|+.+++
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~ 98 (279)
T 3i3n_A 21 WRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIE 98 (279)
T ss_dssp HHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHH
Confidence 45778999999999999998 9999999999999999999999987 77888899998 555 899999999
Q ss_pred HHhCceeecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHHhch---hhHH
Q 010841 104 FCYGIAVDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQI---VRRC 180 (499)
Q Consensus 104 FcYtg~i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~sw~d~i~~L~sC~~L~~~Ae~~~i---v~rc 180 (499)
|+|||++.++.+||..++.||++|||++ |++.|++||.+.+.+ .+|..++.+|+.+++ .++|
T Consensus 99 ~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~ 163 (279)
T 3i3n_A 99 YMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKA 163 (279)
T ss_dssp HHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHH
T ss_pred hhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHH
Confidence 9999999999999999999999999996 999999999999865 577788888888773 3444
Q ss_pred HHHHHHHHccCCCCccccccCCCCCCCCCCcCcCCCCCCCCCCCCCCCccccccccCChhHHHHHHHHHHhcCCChHHHH
Q 010841 181 SESIAWKACANPKGIRWAYTGRPPKISSPKWNDMKDSSPSRSQPVPPDWWFEDVSILRIDHFVRVVTAIKVKGMRFELIG 260 (499)
Q Consensus 181 idala~ka~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~rvI~am~~~g~~~~~I~ 260 (499)
.+-|. .++..+. -.+++..|+.+.+..++....-...+++.|.
T Consensus 164 ~~~i~----~~f~~v~---------------------------------~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf 206 (279)
T 3i3n_A 164 ADMIR----RNFHKVI---------------------------------QDEEFYTLPFHLIRDWLSDLEITVDSEEVLF 206 (279)
T ss_dssp HHHHH----HTHHHHT---------------------------------TSSGGGGSCHHHHHHHHTCSSCCCSCHHHHH
T ss_pred HHHHH----HHHHHHh---------------------------------cCcChhcCCHHHHHHHhcCcCCCCCCHHHHH
Confidence 44433 3322221 1367889999999999987765555788999
Q ss_pred HHHHHHHHHHhhcccccCCCCcccccccccCCCCCCCCCCCCCcceeecCCCCCCcchhhhhhHHHHHHHHHhCCCCC-C
Q 010841 261 AAIMHYAAKWLTGLIRESSGTADEISSYSASNSNGSCSSWKGGLHMIVAGMKDDPPTVQAKDQRMIIESLISIIPPQK-D 339 (499)
Q Consensus 261 ~~l~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~llEtiv~lLP~ek-~ 339 (499)
++++.|++.-.+ ..+..+.. ||..=| .
T Consensus 207 ~av~~W~~~~~~-------------------------------------------------~r~~~~~~---ll~~VRf~ 234 (279)
T 3i3n_A 207 ETVLKWVQRNAE-------------------------------------------------ERERYFEE---LFKLLRLS 234 (279)
T ss_dssp HHHHHHHHTTHH-------------------------------------------------HHTTTHHH---HHTTSCGG
T ss_pred HHHHHHHHcCHH-------------------------------------------------HHHHHHHH---HHHhcCCC
Confidence 999999884221 11122222 232212 3
Q ss_pred cccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010841 340 SVSCSFLLRLLRMANMLKVAPALVTELEKR 369 (499)
Q Consensus 340 ~vsc~fL~~LLr~A~~l~as~~cr~~LE~r 369 (499)
.+|..+|..+++..-.+..++.|+.-|..-
T Consensus 235 l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea 264 (279)
T 3i3n_A 235 QMKPTYLTRHVKPERLVANNEVCVKLVADA 264 (279)
T ss_dssp GSCHHHHHHTTTTSHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHhhccchhcCCHHHHHHHHHH
Confidence 478999999998888888899998776543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=3.6e-26 Score=223.69 Aligned_cols=181 Identities=15% Similarity=0.154 Sum_probs=139.0
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-C--CCCCceEEccCCCCCHHHHHHHHHHHhCcee
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R--DSELNKIVLDDLPGGPEAFELAAKFCYGIAV 110 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~--e~~~~~I~L~~~pgga~afell~~FcYtg~i 110 (499)
++.+.++.++.+|||+|.|||+.|++||.+|+++|+||++||+.+ . ++...+|.|++++ +++|+.+++|+|||++
T Consensus 20 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~ 97 (256)
T 3hve_A 20 RALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQI 97 (256)
T ss_dssp HHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCC
Confidence 456789999999999999999999999999999999999999975 3 5677899999997 8999999999999999
Q ss_pred ecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHHhch---hhHHHHHHHHH
Q 010841 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQI---VRRCSESIAWK 187 (499)
Q Consensus 111 ~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~sw~d~i~~L~sC~~L~~~Ae~~~i---v~rcidala~k 187 (499)
.++.+||..++.||++|||++ |++.|++||.+.+.+ .+|..++.+|+.+++ .+.|.+-|...
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 162 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETH 162 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999997 999999999999865 477777888888773 34444444333
Q ss_pred HccCCCCccccccCCCCCCCCCCcCcCCCCCCCCCCCCCCCccccccccCChhHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 010841 188 ACANPKGIRWAYTGRPPKISSPKWNDMKDSSPSRSQPVPPDWWFEDVSILRIDHFVRVVTAIKVKGMRFELIGAAIMHYA 267 (499)
Q Consensus 188 a~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~rvI~am~~~g~~~~~I~~~l~~Ya 267 (499)
. ..+. -.+++..|+.+.+..++....-...+++.|.++++.|+
T Consensus 163 f----~~v~---------------------------------~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~ 205 (256)
T 3hve_A 163 F----RDVS---------------------------------STEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWI 205 (256)
T ss_dssp H----HHHT---------------------------------TCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTC
T ss_pred H----HHHh---------------------------------CCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHH
Confidence 2 2110 03688999999999999987766567889999998776
Q ss_pred H
Q 010841 268 A 268 (499)
Q Consensus 268 ~ 268 (499)
+
T Consensus 206 ~ 206 (256)
T 3hve_A 206 A 206 (256)
T ss_dssp C
T ss_pred H
Confidence 5
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.88 E-value=8.1e-23 Score=187.19 Aligned_cols=149 Identities=15% Similarity=0.099 Sum_probs=124.8
Q ss_pred chhhhhcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-CCCCCceEEccCCCCCHHHHHHHHHHHh
Q 010841 28 TDGFELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCY 106 (499)
Q Consensus 28 ~~~~~~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~~~pgga~afell~~FcY 106 (499)
|.+--.+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. +++...+|.|++++ +++|+.+++|+|
T Consensus 17 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Y 94 (172)
T 3htm_A 17 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIY 94 (172)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHh
Confidence 434344567789999999999999999999999999999999999999986 67778899999997 899999999999
Q ss_pred CceeecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHHhchhhHHHHHHHH
Q 010841 107 GIAVDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQIVRRCSESIAW 186 (499)
Q Consensus 107 tg~i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~sw~d~i~~L~sC~~L~~~Ae~~~iv~rcidala~ 186 (499)
|+++.++.+|+..++.+|++++|++ |.+.|++||.+.+.. .+|..++.+|+.+++ ....+....
T Consensus 95 t~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~~---------~n~~~~~~~A~~~~~-~~L~~~~~~ 158 (172)
T 3htm_A 95 TGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSA-DQLKTQAVD 158 (172)
T ss_dssp HSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCCT---------TTHHHHHHHHHHTTC-HHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCCH---------HHHHHHHHHHHHhCc-HHHHHHHHH
Confidence 9999999999999999999999996 999999999998854 577888888888774 333333333
Q ss_pred HHccCCCC
Q 010841 187 KACANPKG 194 (499)
Q Consensus 187 ka~~~~~~ 194 (499)
.++.++..
T Consensus 159 ~i~~~~~~ 166 (172)
T 3htm_A 159 FINYHATD 166 (172)
T ss_dssp HHHHTC--
T ss_pred HHHHHHHH
Confidence 34445443
No 4
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=9.7e-23 Score=177.36 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=96.5
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-CCCCCceEEccCCCCCHHHHHHHHHHHhCceeec
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDL 112 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~~~pgga~afell~~FcYtg~i~i 112 (499)
+..+.++.++.+|||+|.|+|++|++||.+|+++|+||++||.+. .|+...+|.|++++ +++|+.+++|+|||++.+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~ 91 (120)
T 2if5_A 14 SGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTV 91 (120)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCcc
Confidence 356678999999999999999999999999999999999999987 67778899999987 899999999999999999
Q ss_pred ccchHhhHHHhhcccccccccccCcHHHHHHHHHH
Q 010841 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~ 147 (499)
+.+|+..++.||++++|++ |++.|++||+
T Consensus 92 ~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 92 STANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp CGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 9999999999999999997 9999999984
No 5
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.87 E-value=1.2e-22 Score=173.53 Aligned_cols=103 Identities=22% Similarity=0.332 Sum_probs=93.1
Q ss_pred hhhcCCCeeEEEEECC----EEEEeccccccccCHHHHHhhcCC-CCCCCceEEccCCCCCHHHHHHHHHHHhCceeecc
Q 010841 39 YVATDIPSDFLVQIGD----VNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (499)
Q Consensus 39 ~r~~~~lcDV~l~V~~----~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it 113 (499)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||.+. .|+. .+|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5778999999999998 999999999999999999999986 5666 899999987 8999999999999999999
Q ss_pred cchHhhHHHhhcccccccccccCcHHHHHHHHHHHhh
Q 010841 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVV 150 (499)
Q Consensus 114 ~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l 150 (499)
.+|+..++.+|++++|++ |.+.|++||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999996 9999999998864
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.87 E-value=6.4e-23 Score=179.13 Aligned_cols=105 Identities=21% Similarity=0.153 Sum_probs=95.7
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCceeecc
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it 113 (499)
++.+.+|.++.+|||+|.|+|++|++||.+|+++|+||++||.++. ..+|.|++++ +++|+.+++|+|||++.++
T Consensus 13 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~ 87 (119)
T 3b84_A 13 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 87 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 4567899999999999999999999999999999999999998753 5689999987 8999999999999999999
Q ss_pred cchHhhHHHhhcccccccccccCcHHHHHHHHHHHh
Q 010841 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (499)
Q Consensus 114 ~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~ 149 (499)
.+|+..|+.||++|||++ |.+.|++||.+.
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 88 SGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 999999999999999997 999999999764
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.87 E-value=1.9e-22 Score=177.44 Aligned_cols=106 Identities=24% Similarity=0.415 Sum_probs=99.2
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-CCCCCceEEc-cCCCCCHHHHHHHHHHHhCceee
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVL-DDLPGGPEAFELAAKFCYGIAVD 111 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L-~~~pgga~afell~~FcYtg~i~ 111 (499)
+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .| ...+|.| ++++ +++|+.+++|+|||++.
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~ 94 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLN 94 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcC
Confidence 456789999999999999999999999999999999999999987 55 6789999 8987 89999999999999999
Q ss_pred cccchHhhHHHhhcccccccccccCcHHHHHHHHHHH
Q 010841 112 LTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (499)
Q Consensus 112 it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~ 148 (499)
++.+|+..|+.||++|+|++ |++.|++||.+
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 99999999999999999996 99999999976
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=175.37 Aligned_cols=104 Identities=21% Similarity=0.324 Sum_probs=95.2
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEcc--CCCCCHHHHHHHHHHHhCceee
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD--DLPGGPEAFELAAKFCYGIAVD 111 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~--~~pgga~afell~~FcYtg~i~ 111 (499)
++.+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .+.+|.|+ +++ +++|+.+++|+|||++.
T Consensus 11 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~ 85 (116)
T 2vpk_A 11 ERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTLN 85 (116)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCcc
Confidence 456789999999999999999999999999999999999999876 24567777 887 89999999999999999
Q ss_pred cccchHhhHHHhhcccccccccccCcHHHHHHHHHHH
Q 010841 112 LTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (499)
Q Consensus 112 it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~ 148 (499)
++.+||..++.||++|||++ |++.|++||.+
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 99999999999999999996 99999999863
No 9
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=4.7e-23 Score=183.75 Aligned_cols=128 Identities=17% Similarity=0.160 Sum_probs=98.6
Q ss_pred hhcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-CCCCCceEEccCCCCCHHHHHHHHHHHhCcee
Q 010841 32 ELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAV 110 (499)
Q Consensus 32 ~~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~~~pgga~afell~~FcYtg~i 110 (499)
-.+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++...+|.|++++ +++|+.+++|+||+++
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 12 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKA 89 (145)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCcc
Confidence 34566788999999999999999999999999999999999999976 56667899999987 8999999999999999
Q ss_pred ecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHHhch
Q 010841 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQI 176 (499)
Q Consensus 111 ~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~sw~d~i~~L~sC~~L~~~Ae~~~i 176 (499)
.++.+|+..++.+|++++|++ |.+.|++||.+.+. ..+|..++.+|+.+++
T Consensus 90 ~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSA 140 (145)
T ss_dssp TTGGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred CCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCH
Confidence 999999999999999999997 99999999999884 3688888889988875
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=2.4e-22 Score=175.77 Aligned_cols=105 Identities=22% Similarity=0.292 Sum_probs=97.7
Q ss_pred hcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCceeec
Q 010841 33 LRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDL 112 (499)
Q Consensus 33 ~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i~i 112 (499)
.++.+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||.++ ..+|.|++++ +++|+.+++|+|||++.+
T Consensus 16 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~ 89 (121)
T 1buo_A 16 LCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQA 89 (121)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcCC
Confidence 3456789999999999999999999999999999999999999863 4689999997 899999999999999999
Q ss_pred ccchHhhHHHhhcccccccccccCcHHHHHHHHHHHh
Q 010841 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~ 149 (499)
+.+|+..++.||++|||++ |.+.|++||.+.
T Consensus 90 ~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 90 KAEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp CGGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 9999999999999999996 999999999875
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.86 E-value=9.3e-23 Score=182.25 Aligned_cols=107 Identities=21% Similarity=0.169 Sum_probs=94.6
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCceeecc
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it 113 (499)
++.+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+||+++.++
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~ 88 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 88 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCCCC
Confidence 4567899999999999999999999999999999999999998753 4679999987 8999999999999999999
Q ss_pred cchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhh
Q 010841 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (499)
Q Consensus 114 ~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~ 151 (499)
.+||..|+.||++|||++ |++.|++||.+.+.
T Consensus 89 ~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 89 SGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 999999999999999996 99999999998774
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.86 E-value=2.8e-22 Score=179.42 Aligned_cols=113 Identities=20% Similarity=0.254 Sum_probs=101.4
Q ss_pred hhcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEcc-CCCCCHHHHHHHHHHHhCcee
Q 010841 32 ELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD-DLPGGPEAFELAAKFCYGIAV 110 (499)
Q Consensus 32 ~~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~-~~pgga~afell~~FcYtg~i 110 (499)
-.++.+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||.+... +..+|.|+ +++ +++|+.+++|+|||++
T Consensus 23 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~ 99 (138)
T 2z8h_A 23 VLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEVT--VKGFEPLIQFAYTAKL 99 (138)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCCC--HHHHHHHHHHhcCCCc
Confidence 3456778999999999999999999999999999999999999997631 23578885 786 8999999999999999
Q ss_pred ecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcc
Q 010841 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSS 153 (499)
Q Consensus 111 ~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~s 153 (499)
.++.+||..|+.||++|||++ |++.|++||.+.+..+
T Consensus 100 ~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp CCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSCC
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcccc
Confidence 999999999999999999997 9999999999988653
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=2e-22 Score=178.15 Aligned_cols=105 Identities=20% Similarity=0.285 Sum_probs=90.5
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEcc-CCCCCHHHHHHHHHHHhCceeec
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD-DLPGGPEAFELAAKFCYGIAVDL 112 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~-~~pgga~afell~~FcYtg~i~i 112 (499)
+..+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...+|.|+ +++ +++|+.+++|+|||++.+
T Consensus 22 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i 96 (129)
T 3ga1_A 22 ECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRLSM 96 (129)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEEEC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCcccc
Confidence 456788999999999999999999999999999999999999875 55789996 887 899999999999999999
Q ss_pred ccchHhhHHHhhcccccccccccCcHHHHHHHHHHHh
Q 010841 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~ 149 (499)
+.+||..|+.||++|||++ |++.|++||.+.
T Consensus 97 ~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 97 NVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp CTTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 9999999999999999997 889999999875
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.85 E-value=2.6e-22 Score=175.31 Aligned_cols=102 Identities=20% Similarity=0.259 Sum_probs=94.4
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCceeecc
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it 113 (499)
+..+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ..+|.|++++ +++|+.+++|+|||++.++
T Consensus 16 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~ 89 (119)
T 2q81_A 16 EQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSLS 89 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 456789999999999999999999999999999999999999863 3567888876 8999999999999999999
Q ss_pred cchHhhHHHhhcccccccccccCcHHHHHHHHHH
Q 010841 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (499)
Q Consensus 114 ~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~ 147 (499)
.+|+..++.+|++|||++ |++.|++||.
T Consensus 90 ~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 90 PENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 999999999999999997 9999999985
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.85 E-value=1.6e-22 Score=177.44 Aligned_cols=105 Identities=22% Similarity=0.234 Sum_probs=95.0
Q ss_pred hcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccC-CCCCHHHHHHHHHHHhCceee
Q 010841 33 LRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDD-LPGGPEAFELAAKFCYGIAVD 111 (499)
Q Consensus 33 ~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~-~pgga~afell~~FcYtg~i~ 111 (499)
.++.+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||..... +..+|.|++ ++ +++|+.+++|+|||++.
T Consensus 20 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~~~--~~~f~~~l~~iYtg~~~ 96 (125)
T 3ohu_A 20 LLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTK-NDLVVSLPEEVT--ARGFGPLLQFAYTAKLL 96 (125)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCC-SSCEEECCTTCC--HHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCC-CCcEEEeCCCCC--HHHHHHHHHhHcCCceE
Confidence 345678999999999999999999999999999999999999997632 267899987 87 89999999999999999
Q ss_pred cccchHhhHHHhhcccccccccccCcHHHHHHHHH
Q 010841 112 LTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFL 146 (499)
Q Consensus 112 it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL 146 (499)
++.+||..++.||++|||++ |++.|++||
T Consensus 97 ~~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 97 LSRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp ECTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred ECHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 99999999999999999997 788888775
No 16
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=3.4e-22 Score=180.81 Aligned_cols=107 Identities=19% Similarity=0.184 Sum_probs=94.7
Q ss_pred hcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-C--CCCCceEEccCCCCCHHHHHHHHHHHhCce
Q 010841 33 LRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R--DSELNKIVLDDLPGGPEAFELAAKFCYGIA 109 (499)
Q Consensus 33 ~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~--e~~~~~I~L~~~pgga~afell~~FcYtg~ 109 (499)
.++.+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||... . ++...+|.|++++ +++|+.+++|+|||+
T Consensus 35 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~ 112 (144)
T 2ppi_A 35 LRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQ 112 (144)
T ss_dssp HHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSC
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCC
Confidence 3456789999999999999999999999999999999999999875 3 3567889999997 899999999999999
Q ss_pred eecccchHhhHHHhhcccccccccccCcHHHHHHHHHH
Q 010841 110 VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (499)
Q Consensus 110 i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~ 147 (499)
+.++.+||..|+.||++|||++ |++.|++||.
T Consensus 113 ~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 113 IRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999999999997 9999999974
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.84 E-value=4.5e-22 Score=174.92 Aligned_cols=107 Identities=20% Similarity=0.242 Sum_probs=94.9
Q ss_pred hhcchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEc-cCCCCCHHHHHHHHHHHhCcee
Q 010841 32 ELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVL-DDLPGGPEAFELAAKFCYGIAV 110 (499)
Q Consensus 32 ~~~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L-~~~pgga~afell~~FcYtg~i 110 (499)
-.++.+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||++... +..+|.| .+++ +++|+.+++|+|||++
T Consensus 16 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~--~~~f~~lL~~iYtg~~ 92 (124)
T 2ihc_A 16 VLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVT--VKGFEPLIQFAYTAKL 92 (124)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcC--HHHHHHHHHHhcCCCc
Confidence 3456788999999999999999999999999999999999999997631 2357888 4786 8999999999999999
Q ss_pred ecccchHhhHHHhhcccccccccccCcHHHHHHHHHH
Q 010841 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (499)
Q Consensus 111 ~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~ 147 (499)
.++.+||..|+.||++|||++ |++.|++||.
T Consensus 93 ~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 93 ILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp EEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred ccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999999999997 8889999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.84 E-value=1.6e-21 Score=171.41 Aligned_cols=94 Identities=21% Similarity=0.237 Sum_probs=86.3
Q ss_pred hhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCceeecccchHh
Q 010841 39 YVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTASNIS 118 (499)
Q Consensus 39 ~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it~~NV~ 118 (499)
.|.++.+|||+|.|+|+.|++||.+||++|+||++ ...+|+|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 47789999999999999999999999999999985 24578999997 899999999999999999999999
Q ss_pred hHHHhhcccccccccccCcHHHHHHHHHHH
Q 010841 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (499)
Q Consensus 119 ~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~ 148 (499)
.++.||++|||+. |++.|++++.+
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999996 99999999876
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.81 E-value=2.7e-20 Score=186.74 Aligned_cols=136 Identities=17% Similarity=0.179 Sum_probs=116.4
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCC-CCCCCceEEccCCCCCHHHHHHHHHHHhCceeec
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDL 112 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~e~~~~~I~L~~~pgga~afell~~FcYtg~i~i 112 (499)
+....++.++.+|||+|.|+|++|++||.+||++|+||++||.+. +|+...+|.|++++ +++|+.+++|+||+++.+
T Consensus 163 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~ 240 (312)
T 3hqi_A 163 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPN 240 (312)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCC
Confidence 455678889999999999999999999999999999999999986 67788899999997 899999999999999999
Q ss_pred ccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHHhc---hhhHHHHHHHH
Q 010841 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQ---IVRRCSESIAW 186 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~sw~d~i~~L~sC~~L~~~Ae~~~---iv~rcidala~ 186 (499)
+..|+..|+.||++++|+. |+..|++||.+.+.. .+|..++.+|+.++ |.++|++-|+.
T Consensus 241 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 241 LDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999996 999999999998744 57777888888875 44455555443
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.79 E-value=9.3e-20 Score=158.88 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=86.0
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCcee-ec
Q 010841 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAV-DL 112 (499)
Q Consensus 34 ~~~~~~r~~~~lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~i-~i 112 (499)
+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ..+|.|++++ +++|+.+++|+|||++ .+
T Consensus 20 ~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~ 93 (116)
T 3fkc_A 20 NSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIVRV 93 (116)
T ss_dssp HHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 456788999999999999999999999999999999999999865 4689999997 8999999999999999 79
Q ss_pred ccchHhhHHHhhccccccc
Q 010841 113 TASNISGLRCAAEYLEMTE 131 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM~e 131 (499)
+.+|+..++.||++|||+.
T Consensus 94 ~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 94 RSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHhCccc
Confidence 9999999999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.44 E-value=8e-14 Score=128.41 Aligned_cols=96 Identities=13% Similarity=0.202 Sum_probs=83.5
Q ss_pred EEEEE-CCEEEEeccccccccCHHHHHhhcC-C-C-CCCCceEEccCCCCCHHHHHHHHHHHhCce--------------
Q 010841 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYE-S-R-DSELNKIVLDDLPGGPEAFELAAKFCYGIA-------------- 109 (499)
Q Consensus 48 V~l~V-~~~~F~lHK~vLas~S~YFr~lf~~-~-~-e~~~~~I~L~~~pgga~afell~~FcYtg~-------------- 109 (499)
|+|+. +|+.|.+||.+ |++|+|||.||.+ + . |..+..|.|++|+ +.+++.+++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77765 79999999998 9999999999997 4 4 5566789999998 799999999999877
Q ss_pred ------------eecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhc
Q 010841 110 ------------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLS 152 (499)
Q Consensus 110 ------------i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~ 152 (499)
+.++.+|+..|+.||.||||.. |++.|+.|+...+..
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~g 128 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIKG 128 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHSS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcC
Confidence 8899999999999999999996 999999999998854
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.26 E-value=6.7e-12 Score=106.47 Aligned_cols=79 Identities=13% Similarity=0.241 Sum_probs=65.8
Q ss_pred EEEEE-CCEEEEeccccccccCHHHHHhhcC--C-CCCCCceEEccCCCCCHHHHHHHHHHHh-----C---ceee---c
Q 010841 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYE--S-RDSELNKIVLDDLPGGPEAFELAAKFCY-----G---IAVD---L 112 (499)
Q Consensus 48 V~l~V-~~~~F~lHK~vLas~S~YFr~lf~~--~-~e~~~~~I~L~~~pgga~afell~~FcY-----t---g~i~---i 112 (499)
|+|+- +|+.|.+||.+ |++|+|||.||++ . .|+....|.|++++ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 68999999999 9999999999997 3 45667899999997 799999999999 5 6787 9
Q ss_pred ccchHhhHHHhhccccc
Q 010841 113 TASNISGLRCAAEYLEM 129 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM 129 (499)
+.+|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999983
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.12 E-value=6.9e-11 Score=106.88 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=82.4
Q ss_pred EEEEE-CCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCce-----------------
Q 010841 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA----------------- 109 (499)
Q Consensus 48 V~l~V-~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~----------------- 109 (499)
|+|+. +|+.|.+||.+ |.+|+|||.||.+.. ...|.|++|+ +.+++.+++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 78999999998 899999999998632 4579999998 799999999999754
Q ss_pred ---------eecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhc
Q 010841 110 ---------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLS 152 (499)
Q Consensus 110 ---------i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~ 152 (499)
+.++.+++..|+.||.||+|.. |++.||.|+...+-.
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIKG 123 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHcC
Confidence 7889999999999999999996 999999999998843
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.96 E-value=8e-11 Score=108.63 Aligned_cols=94 Identities=13% Similarity=0.221 Sum_probs=52.5
Q ss_pred EEEEE-CCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCce-----------------
Q 010841 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA----------------- 109 (499)
Q Consensus 48 V~l~V-~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~----------------- 109 (499)
|+|+. +|+.|.+||.+ |.+|+||+.||.+.. ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998652 23479999998 799999999999865
Q ss_pred ----------eecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhhc
Q 010841 110 ----------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLS 152 (499)
Q Consensus 110 ----------i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~~ 152 (499)
+.++..++..|+.||.||+|.. |++.||.|+...+-.
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ikg 127 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIKG 127 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTTTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcC
Confidence 5789999999999999999996 999999999998844
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.41 E-value=3.2e-07 Score=78.14 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=67.2
Q ss_pred eEEEEE-CCEEEEeccccccccCHHHHHhhcCCCCCCCceEEccCCCCCHHHHHHHHHHHhCce--------------ee
Q 010841 47 DFLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA--------------VD 111 (499)
Q Consensus 47 DV~l~V-~~~~F~lHK~vLas~S~YFr~lf~~~~e~~~~~I~L~~~pgga~afell~~FcYtg~--------------i~ 111 (499)
-|+|+- +|+.|.+|+.+ |..|+++|.|+.++-+.....|.|++++ +.+++.+++|||.-+ ..
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 367776 79999999996 8999999999987434444689999998 799999999999532 36
Q ss_pred cccchHhhHHHhhccccc
Q 010841 112 LTASNISGLRCAAEYLEM 129 (499)
Q Consensus 112 it~~NV~~L~~AA~~LqM 129 (499)
+..+++..|+.||.||++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 788899999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.36 E-value=3.7e-07 Score=77.31 Aligned_cols=79 Identities=13% Similarity=0.211 Sum_probs=64.3
Q ss_pred EEEEE-CCEEEEeccccccccCHHHHHhhcCC---CCCCCceEEccCCCCCHHHHHHHHHHHhCce-----------eec
Q 010841 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYES---RDSELNKIVLDDLPGGPEAFELAAKFCYGIA-----------VDL 112 (499)
Q Consensus 48 V~l~V-~~~~F~lHK~vLas~S~YFr~lf~~~---~e~~~~~I~L~~~pgga~afell~~FcYtg~-----------i~i 112 (499)
|+|+- +|+.|.+|+.+ |..|++++.|+.+. .|.....|.|++++ +.+++.+++|||.-+ ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 78999999996 89999999999863 34445689999998 799999999999532 368
Q ss_pred ccchHhhHHHhhccccc
Q 010841 113 TASNISGLRCAAEYLEM 129 (499)
Q Consensus 113 t~~NV~~L~~AA~~LqM 129 (499)
..+.+..|+.||.||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.29 E-value=9.6e-07 Score=82.13 Aligned_cols=96 Identities=10% Similarity=0.143 Sum_probs=77.6
Q ss_pred eEEEEE-CCEEEEeccccccccCHHHHHhhcCC-CC----CCCceEEccCCCCCHHHHHHHHHHHhCce-----------
Q 010841 47 DFLVQI-GDVNFHLHKYPLLSRSGKMNRLIYES-RD----SELNKIVLDDLPGGPEAFELAAKFCYGIA----------- 109 (499)
Q Consensus 47 DV~l~V-~~~~F~lHK~vLas~S~YFr~lf~~~-~e----~~~~~I~L~~~pgga~afell~~FcYtg~----------- 109 (499)
-|+|+- +|+.|.+++.+ |..|++++.|+... .+ .....|.|++|+ +.+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 68999999997 88899999999864 21 223689999998 799999999998421
Q ss_pred --------------eecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhhh
Q 010841 110 --------------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (499)
Q Consensus 110 --------------i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l~ 151 (499)
+.+....+..|+.||.||+|.. |++.||.++...+-
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMIR 134 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHT
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHHc
Confidence 4577789999999999999996 99999999988773
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.75 E-value=2.1e-05 Score=68.43 Aligned_cols=80 Identities=13% Similarity=0.193 Sum_probs=63.5
Q ss_pred eEEEE-ECCEEEEeccccccccCHHHHHhhcCC---CCCCCceEEccCCCCCHHHHHHHHHHHhCce-----------ee
Q 010841 47 DFLVQ-IGDVNFHLHKYPLLSRSGKMNRLIYES---RDSELNKIVLDDLPGGPEAFELAAKFCYGIA-----------VD 111 (499)
Q Consensus 47 DV~l~-V~~~~F~lHK~vLas~S~YFr~lf~~~---~e~~~~~I~L~~~pgga~afell~~FcYtg~-----------i~ 111 (499)
-|+|+ -+|+.|.+++. .|..|+.++.|+.+. .+.....|.|++|+ +.+++.|++|||--+ ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36666 47899999999 578899999999863 23344689999998 799999999998422 36
Q ss_pred cccchHhhHHHhhccccc
Q 010841 112 LTASNISGLRCAAEYLEM 129 (499)
Q Consensus 112 it~~NV~~L~~AA~~LqM 129 (499)
+..+++..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.63 E-value=0.00012 Score=62.76 Aligned_cols=93 Identities=17% Similarity=0.183 Sum_probs=72.4
Q ss_pred eEEEEECCEEEEeccccccccC-HHHHHhhcCCCC-----CCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHhh
Q 010841 47 DFLVQIGDVNFHLHKYPLLSRS-GKMNRLIYESRD-----SELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISG 119 (499)
Q Consensus 47 DV~l~V~~~~F~lHK~vLas~S-~YFr~lf~~~~e-----~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~~ 119 (499)
=|+|.|||+.|...+..|.... .+|.+||....+ ....++-| |- .|..|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999885 578999875311 12344554 33 489999999999999988744 34578
Q ss_pred HHHhhcccccccccccCcHHHHHHHHHHH
Q 010841 120 LRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (499)
Q Consensus 120 L~~AA~~LqM~e~~~~~nL~~~ce~FL~~ 148 (499)
++..|+|.++++ |++.|++-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999997 88888875543
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.16 E-value=0.0086 Score=57.16 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=72.3
Q ss_pred eEEEEECCEEEEeccccccccC-HHHHHhhcCCCC-----CCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHhh
Q 010841 47 DFLVQIGDVNFHLHKYPLLSRS-GKMNRLIYESRD-----SELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISG 119 (499)
Q Consensus 47 DV~l~V~~~~F~lHK~vLas~S-~YFr~lf~~~~e-----~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~~ 119 (499)
=|+|.|||+.|...+..|.... .+|.+||....+ ....++-| |- .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DR--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CS--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cC--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4678999999999999998774 488999875311 12344554 32 368999999999999998744 34467
Q ss_pred HHHhhcccccccccccCcHHHHHHHHHHHh
Q 010841 120 LRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (499)
Q Consensus 120 L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~ 149 (499)
++.-|+|+++.+ |++.|.+-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999996 888888887654
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.40 E-value=0.0054 Score=53.40 Aligned_cols=82 Identities=15% Similarity=0.215 Sum_probs=63.1
Q ss_pred EEEEECCEEEEeccccccccC-HHHHHhhcCC--CCCCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHhhHHHh
Q 010841 48 FLVQIGDVNFHLHKYPLLSRS-GKMNRLIYES--RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISGLRCA 123 (499)
Q Consensus 48 V~l~V~~~~F~lHK~vLas~S-~YFr~lf~~~--~e~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~~L~~A 123 (499)
|+|.|||+.|...+..|...- ..|.+|+... .+....++-|. -.|..|..|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 789999999999999998763 3466777642 12334566652 2368999999999999998755 367889999
Q ss_pred hcccccccc
Q 010841 124 AEYLEMTED 132 (499)
Q Consensus 124 A~~LqM~e~ 132 (499)
|+|.++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999974
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.86 E-value=0.049 Score=47.97 Aligned_cols=81 Identities=11% Similarity=0.200 Sum_probs=58.4
Q ss_pred eeEEEEECCEEEEeccccccccCHHHHHhhcCC-C----CCCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHhh
Q 010841 46 SDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISG 119 (499)
Q Consensus 46 cDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~----e~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~~ 119 (499)
.=|+|.|||+.|..-+..|...-+ .|+... + .....++-| +-.|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 347889999999999988876532 123221 1 122345554 23489999999999999998654 35788
Q ss_pred HHHhhcccccccc
Q 010841 120 LRCAAEYLEMTED 132 (499)
Q Consensus 120 L~~AA~~LqM~e~ 132 (499)
++.-|+|+++++.
T Consensus 87 l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 87 YDDELAFYGILPE 99 (124)
T ss_dssp HHHHHHHTTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999973
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=93.73 E-value=0.053 Score=45.97 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=58.4
Q ss_pred EEEEECCEEEEeccccccccC-HHHHHhhcCC--CCCCCceEEccCCCCCHHHHHHHHHHHhC-ceeeccc-chHhhHHH
Q 010841 48 FLVQIGDVNFHLHKYPLLSRS-GKMNRLIYES--RDSELNKIVLDDLPGGPEAFELAAKFCYG-IAVDLTA-SNISGLRC 122 (499)
Q Consensus 48 V~l~V~~~~F~lHK~vLas~S-~YFr~lf~~~--~e~~~~~I~L~~~pgga~afell~~FcYt-g~i~it~-~NV~~L~~ 122 (499)
|+|.|||+.|...+..|...- ..+.+|+... -.....++-|. -.|..|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD---Rdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD---RNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC---SCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc---CChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999999886552 2344444321 11234566652 236899999999998 8987643 35678999
Q ss_pred hhccccccc
Q 010841 123 AAEYLEMTE 131 (499)
Q Consensus 123 AA~~LqM~e 131 (499)
-|+|.++.+
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999997
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.20 E-value=0.051 Score=46.33 Aligned_cols=85 Identities=15% Similarity=0.230 Sum_probs=60.6
Q ss_pred EEEEECCEEEEeccccccccCHHHHHhhcCC-C----CCCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHhhHH
Q 010841 48 FLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISGLR 121 (499)
Q Consensus 48 V~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~----e~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~~L~ 121 (499)
|+|.|||+.|...+..|...-+ .|+... + .....++-|. -.|..|+.|++|.-+|++.+.. .++..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD---Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD---RDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC---SCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe---CCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999988876532 123221 1 1233455552 2368999999999999987654 3578899
Q ss_pred HhhcccccccccccCcHHHHHH
Q 010841 122 CAAEYLEMTEDLEEGNLIFKTE 143 (499)
Q Consensus 122 ~AA~~LqM~e~~~~~nL~~~ce 143 (499)
.-|+|.++++. +++.||
T Consensus 76 ~Ea~fy~i~~l-----~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPE-----IIGDCC 92 (105)
T ss_dssp HHHHHHTCCSC-----CBCHHH
T ss_pred HHHHHcCCCHH-----HHHHHH
Confidence 99999999974 455655
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=92.10 E-value=0.058 Score=48.48 Aligned_cols=82 Identities=11% Similarity=0.195 Sum_probs=59.4
Q ss_pred CeeEEEEECCEEEEeccccccccCHHHHHhhcCC-C----CCCCceEEccCCCCCHHHHHHHHHHHhCceeeccc-chHh
Q 010841 45 PSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNIS 118 (499)
Q Consensus 45 lcDV~l~V~~~~F~lHK~vLas~S~YFr~lf~~~-~----e~~~~~I~L~~~pgga~afell~~FcYtg~i~it~-~NV~ 118 (499)
..=|+|.|||+.|...+..|...-+ .|+... + .....++-| +-.+..|+.|++|.-+|++.+.. ..+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 3457889999999999988875432 233221 1 123345555 23489999999999999988654 3578
Q ss_pred hHHHhhcccccccc
Q 010841 119 GLRCAAEYLEMTED 132 (499)
Q Consensus 119 ~L~~AA~~LqM~e~ 132 (499)
.++.-|+|+++++.
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 89999999999974
No 36
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.77 E-value=0.24 Score=41.60 Aligned_cols=36 Identities=11% Similarity=-0.082 Sum_probs=30.1
Q ss_pred ccccccCChhHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 010841 231 FEDVSILRIDHFVRVVTAIKVKGMRFELIGAAIMHYAAK 269 (499)
Q Consensus 231 ~eDl~~L~~~~f~rvI~am~~~g~~~~~I~~~l~~Ya~k 269 (499)
.+++..||.+.+..+|+.. ..+++.|+++++.|++.
T Consensus 46 ~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 46 TEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp SHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred cccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 3688999999999999984 33777999999999874
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=66.79 E-value=1.3 Score=28.54 Aligned_cols=17 Identities=53% Similarity=0.520 Sum_probs=14.5
Q ss_pred chHhhHHHhhccccccc
Q 010841 115 SNISGLRCAAEYLEMTE 131 (499)
Q Consensus 115 ~NV~~L~~AA~~LqM~e 131 (499)
.||+.|+.||+||+=.|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998543
No 38
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=65.79 E-value=4.9 Score=42.95 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=57.3
Q ss_pred eEEEEECCEEEEeccccccccCH-HHHHhhcCC--CCCCCceEEccCCCCCHHHHHHHHHHHhC-ceeeccc-chHhhHH
Q 010841 47 DFLVQIGDVNFHLHKYPLLSRSG-KMNRLIYES--RDSELNKIVLDDLPGGPEAFELAAKFCYG-IAVDLTA-SNISGLR 121 (499)
Q Consensus 47 DV~l~V~~~~F~lHK~vLas~S~-YFr~lf~~~--~e~~~~~I~L~~~pgga~afell~~FcYt-g~i~it~-~NV~~L~ 121 (499)
=|+|.|||+.|...+..|...-+ .+-+++... -+....++-+ +-.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 47889999999999988865421 112222211 1123456665 2348999999999998 9987643 3566789
Q ss_pred Hhhcccccccc
Q 010841 122 CAAEYLEMTED 132 (499)
Q Consensus 122 ~AA~~LqM~e~ 132 (499)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 99999999974
No 39
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=50.82 E-value=7.8 Score=33.25 Aligned_cols=33 Identities=6% Similarity=-0.019 Sum_probs=26.0
Q ss_pred hccCCCCCChhHHHHHHHhcCCCcccCCCchhHHHHHhhhhcCC
Q 010841 453 EVARDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKVISN 496 (499)
Q Consensus 453 EVA~D~nL~~~KF~~Lae~lPd~aR~~~DgLYRAIDiYLKaHp~ 496 (499)
|...|.+.+|.+..+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 55677888888887766 5789999999999994
No 40
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=28.79 E-value=19 Score=32.58 Aligned_cols=17 Identities=18% Similarity=0.526 Sum_probs=15.2
Q ss_pred chhHHHHHhhhhcCCCC
Q 010841 482 GLYRAIDSYLKVISNFC 498 (499)
Q Consensus 482 gLYRAIDiYLKaHp~l~ 498 (499)
++++|||-||-+||..|
T Consensus 148 ~~~K~ie~yllanp~~~ 164 (165)
T 3ie5_A 148 EFYKQVEEYLAANPEVF 164 (165)
T ss_dssp HHHHHHHHHHHHCTTTT
T ss_pred HHHHHHHHHHHhChhhh
Confidence 68999999999999875
No 41
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=26.01 E-value=23 Score=31.65 Aligned_cols=17 Identities=41% Similarity=0.534 Sum_probs=15.1
Q ss_pred chhHHHHHhhhhcCCCC
Q 010841 482 GLYRAIDSYLKVISNFC 498 (499)
Q Consensus 482 gLYRAIDiYLKaHp~l~ 498 (499)
+++++||-||-+||..|
T Consensus 142 ~~~k~ie~yll~np~~~ 158 (159)
T 4a8u_A 142 TLLRAVESYLLAHSDAY 158 (159)
T ss_dssp HHHHHHHHHHHHCTTTT
T ss_pred HHHHHHHHHHhhChhhh
Confidence 68999999999999875
No 42
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=24.16 E-value=25 Score=31.89 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=14.5
Q ss_pred chhHHHHHhhhhcCCCC
Q 010841 482 GLYRAIDSYLKVISNFC 498 (499)
Q Consensus 482 gLYRAIDiYLKaHp~l~ 498 (499)
++++|||-||-+||..|
T Consensus 148 ~~~k~ie~yllanp~~~ 164 (168)
T 3rws_A 148 GFTKAVESFLLANPDYN 164 (168)
T ss_dssp HHHHHHHHHHHHCTTC-
T ss_pred HHHHHHHHHHHhChHhh
Confidence 58999999999999875
No 43
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=23.91 E-value=47 Score=26.87 Aligned_cols=43 Identities=23% Similarity=0.289 Sum_probs=31.4
Q ss_pred CCcccchHHHHHHHHHHHhccccCCCCCCcccccccccccccccCCCchhHHHHHHhhhhhhhh
Q 010841 390 GETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTE 453 (499)
Q Consensus 390 ~~tlYDVd~V~Ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kVakLvD~YLaE 453 (499)
.+..++-+++.||+..+...+.. .-+..++.-|++++|-|..|
T Consensus 5 ~~~~~~~~lI~ril~~~f~~~kt---------------------rI~~dAl~l~aeyl~iFV~E 47 (81)
T 3b0b_C 5 REGGFRKETVERLLRLHFRDGRT---------------------RVNGDALLLMAELLKVFVRE 47 (81)
T ss_dssp --CCCCHHHHHHHHHHHCCSTTC---------------------EECHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhccCcc---------------------cccHHHHHHHHHHHHHHHHH
Confidence 34568899999999986654321 12346789999999999988
No 44
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=21.86 E-value=31 Score=30.57 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=23.8
Q ss_pred ccCCCCCChhHHHHHHHhcCCCcccCCCchhHHHHHhhhhcCC
Q 010841 454 VARDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKVISN 496 (499)
Q Consensus 454 VA~D~nL~~~KF~~Lae~lPd~aR~~~DgLYRAIDiYLKaHp~ 496 (499)
...+.++++.+....-+. -.++++||+-||.+||.
T Consensus 122 ~~~~~~~~~~~~~~~~~~--------~~~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 122 TKGDAQPNEEEGKAAKAR--------GDAFFKAIESYLSAHPD 156 (158)
T ss_dssp ESTTCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHCSS
T ss_pred ECCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHHhCcC
Confidence 445556666655332222 35789999999999998
No 45
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=21.17 E-value=55 Score=28.36 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCceeecccchHhhHHHhhcccccccccccCcHHHHHHHHHHHhh
Q 010841 96 EAFELAAKFCYGIAVDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVV 150 (499)
Q Consensus 96 ~afell~~FcYtg~i~it~~NV~~L~~AA~~LqM~e~~~~~nL~~~ce~FL~~~l 150 (499)
...+.+.+|+- -.++.+|+..++..|+..+.++ |.+.|..|+.+..
T Consensus 119 ~l~~~c~~~l~---~~l~~~n~~~~~~~A~~~~~~~------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 119 RLKVMCEDALC---SNLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHH---HTCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---HhCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 34445555543 2478999999999999999986 9999999998865
No 46
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=20.13 E-value=36 Score=30.11 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=26.5
Q ss_pred hccCCCCCChhHHHHHHHhcCCCcccCCCchhHHHHHhhhhcCCCC
Q 010841 453 EVARDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKVISNFC 498 (499)
Q Consensus 453 EVA~D~nL~~~KF~~Lae~lPd~aR~~~DgLYRAIDiYLKaHp~l~ 498 (499)
|...+.++++.+....-+ .-.++|+||+-||.+||..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~--------~~~~~~k~ie~yll~~~~~~ 158 (159)
T 1e09_A 121 HTKGNVEIKEEHVKAGKE--------KASNLFKLIETYLKGHPDAY 158 (159)
T ss_dssp EECSSCCCCHHHHHHHHH--------HHHHHHHHHHHHHHHCTTSC
T ss_pred EECCCCCCCHHHHHHHHH--------HHHHHHHHHHHHHHhChhhc
Confidence 445666777766643222 23578999999999999864
No 47
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=20.05 E-value=34 Score=37.20 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.2
Q ss_pred hHHHHHHHhcCCCcccCCCchhHHHHHhhhhcCCCC
Q 010841 463 TKFQVLAEALPESARTCDDGLYRAIDSYLKVISNFC 498 (499)
Q Consensus 463 ~KF~~Lae~lPd~aR~~~DgLYRAIDiYLKaHp~l~ 498 (499)
.-|.+++--|+ .-|=.||||..||+.||.+.
T Consensus 338 ~~Fkdii~KVa-----N~EiyYKAi~FYL~e~P~lL 368 (624)
T 3lvg_A 338 GQFKDIITKVA-----NVELYYRAIQFYLEFKPLLL 368 (624)
T ss_dssp GGGTTTGGGCS-----CSHHHHHHHHHHTTSCCTTS
T ss_pred HHHHHHHHHcc-----hHHHHHHHHHHHHHhChHHH
Confidence 34555554444 24668999999999999873
Done!