Query 010842
Match_columns 499
No_of_seqs 358 out of 3303
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:11:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 3.6E-96 8E-101 753.7 56.6 485 14-499 51-539 (539)
2 PLN02880 tyrosine decarboxylas 100.0 1.4E-90 3.1E-95 713.7 54.2 481 16-497 9-489 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 3.1E-86 6.8E-91 631.7 40.0 464 17-495 1-474 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 2.1E-74 4.7E-79 594.1 48.7 453 20-485 22-518 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 9.7E-75 2.1E-79 577.8 31.2 370 51-425 1-373 (373)
6 TIGR03811 tyr_de_CO2_Ent tyros 100.0 1.3E-70 2.7E-75 569.3 50.5 468 11-494 8-604 (608)
7 KOG0629 Glutamate decarboxylas 100.0 2.2E-72 4.8E-77 530.6 31.2 465 19-492 30-509 (510)
8 COG0076 GadB Glutamate decarbo 100.0 1.1E-59 2.3E-64 476.5 38.9 438 33-493 4-450 (460)
9 PLN02263 serine decarboxylase 100.0 4.8E-58 1E-62 459.5 38.5 360 69-493 75-444 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 3.5E-57 7.5E-62 457.8 40.5 398 60-493 15-430 (431)
11 PLN03032 serine decarboxylase; 100.0 4.1E-50 8.9E-55 397.9 35.5 356 69-488 8-372 (374)
12 PRK02769 histidine decarboxyla 100.0 1.4E-48 3E-53 390.2 37.8 356 70-492 8-372 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 2.4E-44 5.1E-49 360.5 36.3 340 92-488 1-344 (345)
14 KOG1383 Glutamate decarboxylas 100.0 3.9E-36 8.4E-41 289.2 31.2 393 60-497 54-451 (491)
15 PRK13520 L-tyrosine decarboxyl 100.0 3.3E-35 7.1E-40 297.3 35.9 367 67-491 2-370 (371)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 4.5E-34 9.7E-39 289.2 36.9 367 68-488 1-372 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 9.8E-34 2.1E-38 273.5 32.3 343 90-495 2-380 (386)
18 COG0520 csdA Selenocysteine ly 100.0 3.7E-33 7.9E-38 280.2 33.4 353 91-491 24-404 (405)
19 PRK04366 glycine dehydrogenase 100.0 6.1E-32 1.3E-36 280.0 35.7 399 51-497 35-453 (481)
20 TIGR00461 gcvP glycine dehydro 100.0 1.5E-31 3.3E-36 286.4 37.2 385 67-495 466-870 (939)
21 PRK05367 glycine dehydrogenase 100.0 1.1E-30 2.4E-35 284.9 37.7 382 67-495 478-878 (954)
22 TIGR03531 selenium_SpcS O-phos 100.0 3.5E-29 7.5E-34 252.3 32.2 374 60-489 28-443 (444)
23 PRK00451 glycine dehydrogenase 100.0 6.5E-29 1.4E-33 257.1 32.7 380 51-490 32-446 (447)
24 TIGR03402 FeS_nifS cysteine de 100.0 4.7E-28 1E-32 245.6 35.0 342 92-495 2-375 (379)
25 cd06453 SufS_like Cysteine des 100.0 3.3E-28 7.2E-33 246.3 32.5 318 120-486 34-373 (373)
26 PRK09295 bifunctional cysteine 100.0 6E-28 1.3E-32 246.9 34.0 352 91-491 25-403 (406)
27 PRK10874 cysteine sulfinate de 100.0 7E-28 1.5E-32 246.2 34.4 355 90-493 20-399 (401)
28 TIGR01977 am_tr_V_EF2568 cyste 100.0 4.1E-28 8.9E-33 245.9 32.0 313 127-488 42-375 (376)
29 TIGR03392 FeS_syn_CsdA cystein 100.0 8.2E-28 1.8E-32 245.4 34.3 354 91-493 18-396 (398)
30 TIGR01979 sufS cysteine desulf 100.0 9.5E-28 2E-32 245.5 34.2 355 91-493 20-402 (403)
31 PLN02651 cysteine desulfurase 100.0 1.5E-27 3.3E-32 240.3 31.3 296 124-480 38-364 (364)
32 TIGR02006 IscS cysteine desulf 100.0 1.2E-26 2.6E-31 236.7 33.8 342 90-493 4-378 (402)
33 PLN02855 Bifunctional selenocy 100.0 1.7E-26 3.7E-31 237.5 34.2 356 90-493 33-419 (424)
34 TIGR03403 nifS_epsilon cystein 100.0 5.6E-26 1.2E-30 230.6 34.7 311 126-494 40-377 (382)
35 cd06451 AGAT_like Alanine-glyo 100.0 1.2E-26 2.5E-31 233.5 29.2 342 94-490 2-355 (356)
36 cd00613 GDC-P Glycine cleavage 100.0 2.1E-26 4.5E-31 235.3 30.5 369 71-486 3-398 (398)
37 PLN02414 glycine dehydrogenase 100.0 7.3E-26 1.6E-30 246.0 34.4 390 61-495 496-910 (993)
38 PF00266 Aminotran_5: Aminotra 100.0 2.1E-26 4.6E-31 232.8 26.5 319 120-482 34-371 (371)
39 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.4E-25 9.6E-30 223.9 35.9 314 131-493 65-382 (387)
40 PRK12566 glycine dehydrogenase 100.0 1.9E-25 4.1E-30 238.1 34.2 388 60-493 470-877 (954)
41 PRK02948 cysteine desulfurase; 100.0 1.7E-25 3.8E-30 227.0 31.9 317 120-497 34-379 (381)
42 PLN02409 serine--glyoxylate am 99.9 1.2E-25 2.7E-30 228.8 27.9 350 92-493 10-373 (401)
43 PRK14012 cysteine desulfurase; 99.9 8E-25 1.7E-29 223.6 32.5 303 130-493 50-380 (404)
44 TIGR01814 kynureninase kynuren 99.9 1.1E-24 2.3E-29 222.8 32.2 353 89-490 27-405 (406)
45 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.5E-24 3.2E-29 221.5 33.1 340 91-486 19-397 (397)
46 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5.5E-24 1.2E-28 214.3 35.7 312 125-490 44-360 (361)
47 KOG1549 Cysteine desulfurase N 99.9 1.2E-24 2.7E-29 211.1 24.8 352 86-495 40-421 (428)
48 TIGR02326 transamin_PhnW 2-ami 99.9 3E-24 6.4E-29 216.5 28.7 345 93-490 5-360 (363)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 8.8E-23 1.9E-27 205.9 35.0 309 133-492 55-368 (370)
50 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.5E-23 3.3E-28 210.7 29.3 342 95-489 3-354 (355)
51 TIGR03235 DNA_S_dndA cysteine 99.9 5.4E-24 1.2E-28 213.8 25.8 274 124-453 37-318 (353)
52 PRK13479 2-aminoethylphosphona 99.9 5.4E-23 1.2E-27 207.8 29.0 345 95-493 9-364 (368)
53 COG0436 Aspartate/tyrosine/aro 99.9 1.4E-22 3.1E-27 204.0 31.3 345 93-493 33-392 (393)
54 PLN02721 threonine aldolase 99.9 8.4E-23 1.8E-27 205.2 28.5 305 123-491 38-351 (353)
55 COG0075 Serine-pyruvate aminot 99.9 1.1E-22 2.4E-27 198.6 27.5 318 123-493 32-364 (383)
56 PRK07179 hypothetical protein; 99.9 3.1E-22 6.6E-27 204.8 29.3 331 86-493 58-399 (407)
57 PRK08361 aspartate aminotransf 99.9 7.2E-22 1.6E-26 201.0 30.4 331 103-492 48-390 (391)
58 PTZ00094 serine hydroxymethylt 99.9 1.4E-22 3.1E-27 209.2 25.4 311 122-492 73-408 (452)
59 PLN02724 Molybdenum cofactor s 99.9 5.7E-22 1.2E-26 217.3 30.4 365 91-490 36-486 (805)
60 cd00609 AAT_like Aspartate ami 99.9 9.1E-22 2E-26 197.1 29.1 319 112-488 23-350 (350)
61 COG2008 GLY1 Threonine aldolas 99.9 1.2E-22 2.6E-27 192.6 21.1 305 118-490 28-341 (342)
62 TIGR01822 2am3keto_CoA 2-amino 99.9 4E-21 8.6E-26 195.9 34.0 299 129-493 83-390 (393)
63 cd06502 TA_like Low-specificit 99.9 2.1E-22 4.6E-27 201.0 23.1 295 131-488 34-337 (338)
64 PRK03080 phosphoserine aminotr 99.9 7.7E-22 1.7E-26 199.3 27.3 348 89-495 10-376 (378)
65 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1E-21 2.2E-26 197.3 27.7 307 122-487 15-352 (352)
66 PRK06108 aspartate aminotransf 99.9 1.3E-21 2.9E-26 198.7 28.0 326 104-491 40-381 (382)
67 PRK05764 aspartate aminotransf 99.9 4.4E-21 9.6E-26 195.6 31.0 336 104-493 47-392 (393)
68 PRK05367 glycine dehydrogenase 99.9 9.2E-21 2E-25 207.5 34.3 364 51-487 43-437 (954)
69 cd06454 KBL_like KBL_like; thi 99.9 1.1E-20 2.3E-25 189.6 32.1 337 86-489 5-348 (349)
70 PLN02414 glycine dehydrogenase 99.9 2.4E-20 5.2E-25 203.2 36.1 366 51-488 68-465 (993)
71 COG0399 WecE Predicted pyridox 99.9 4.5E-21 9.9E-26 187.7 27.4 329 104-491 15-372 (374)
72 COG1003 GcvP Glycine cleavage 99.9 1.4E-20 2.9E-25 180.6 29.3 383 63-496 41-451 (496)
73 TIGR01437 selA_rel uncharacter 99.9 1.5E-20 3.2E-25 188.7 30.1 321 102-489 25-362 (363)
74 COG0156 BioF 7-keto-8-aminopel 99.9 1.2E-20 2.7E-25 186.2 28.8 337 83-489 40-387 (388)
75 PRK06207 aspartate aminotransf 99.9 1.2E-19 2.6E-24 185.3 34.2 331 106-493 58-403 (405)
76 PLN00145 tyrosine/nicotianamin 99.9 9.1E-20 2E-24 187.1 33.1 340 106-496 74-428 (430)
77 PRK07324 transaminase; Validat 99.9 4.7E-20 1E-24 186.2 29.7 317 110-492 47-370 (373)
78 PTZ00433 tyrosine aminotransfe 99.9 1.2E-19 2.6E-24 185.9 32.9 336 102-493 51-409 (412)
79 PRK06939 2-amino-3-ketobutyrat 99.9 9.4E-20 2E-24 186.1 32.1 304 125-493 83-394 (397)
80 PRK13580 serine hydroxymethylt 99.9 4E-20 8.7E-25 186.8 28.1 326 121-493 87-446 (493)
81 PLN00175 aminotransferase fami 99.9 4.3E-20 9.3E-25 188.8 28.6 329 103-491 69-412 (413)
82 PLN02187 rooty/superroot1 99.9 2.1E-19 4.6E-24 185.7 34.0 342 104-496 86-442 (462)
83 PLN02656 tyrosine transaminase 99.9 2.1E-19 4.5E-24 183.8 33.6 339 103-495 50-406 (409)
84 cd00611 PSAT_like Phosphoserin 99.9 4.2E-21 9E-26 192.4 20.3 338 94-490 2-354 (355)
85 cd00378 SHMT Serine-glycine hy 99.9 2.7E-20 5.8E-25 190.4 26.6 339 92-491 21-384 (402)
86 PLN02483 serine palmitoyltrans 99.9 2.5E-19 5.4E-24 186.0 34.1 342 85-493 103-467 (489)
87 PTZ00377 alanine aminotransfer 99.9 4.5E-19 9.7E-24 184.9 36.0 332 118-495 108-478 (481)
88 PRK13034 serine hydroxymethylt 99.9 6.1E-20 1.3E-24 187.4 28.4 308 124-491 69-391 (416)
89 PRK07682 hypothetical protein; 99.9 7.6E-20 1.6E-24 185.4 28.8 328 106-493 38-377 (378)
90 PRK05937 8-amino-7-oxononanoat 99.9 1.7E-19 3.6E-24 182.1 31.0 339 84-494 6-352 (370)
91 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.9E-20 8.5E-25 186.9 25.9 332 107-490 17-377 (379)
92 PRK13355 bifunctional HTH-doma 99.9 2.1E-19 4.5E-24 188.9 31.4 334 103-493 164-515 (517)
93 PF02347 GDC-P: Glycine cleava 99.9 4.3E-20 9.4E-25 183.1 24.6 367 51-486 32-429 (429)
94 PRK00011 glyA serine hydroxyme 99.9 1.1E-19 2.4E-24 186.5 28.1 308 124-492 66-389 (416)
95 COG1168 MalY Bifunctional PLP- 99.9 2.5E-19 5.4E-24 170.3 28.0 334 102-492 39-386 (388)
96 cd00615 Orn_deC_like Ornithine 99.9 1.3E-20 2.9E-25 183.9 19.8 224 134-404 64-293 (294)
97 PRK13238 tnaA tryptophanase/L- 99.9 7.8E-19 1.7E-23 180.4 33.5 333 106-492 59-433 (460)
98 PLN02822 serine palmitoyltrans 99.9 1.2E-18 2.7E-23 180.5 35.3 333 105-495 127-480 (481)
99 TIGR01265 tyr_nico_aTase tyros 99.9 9.2E-19 2E-23 178.8 33.7 335 104-492 51-401 (403)
100 PRK07681 aspartate aminotransf 99.9 3.4E-19 7.4E-24 181.8 30.3 327 103-489 47-385 (399)
101 PLN00143 tyrosine/nicotianamin 99.9 1.7E-18 3.6E-23 177.1 35.3 341 102-496 50-408 (409)
102 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.8E-19 8.2E-24 180.3 30.3 335 107-489 13-379 (380)
103 PRK05355 3-phosphoserine/phosp 99.9 2.1E-20 4.6E-25 186.9 20.6 334 95-491 7-357 (360)
104 PRK08912 hypothetical protein; 99.9 4.9E-19 1.1E-23 180.0 31.0 314 119-491 57-385 (387)
105 PRK07777 aminotransferase; Val 99.9 3E-19 6.4E-24 181.6 29.3 327 107-490 43-384 (387)
106 PRK08363 alanine aminotransfer 99.9 4.4E-19 9.6E-24 181.0 30.6 334 104-493 49-395 (398)
107 PRK06107 aspartate aminotransf 99.9 3.3E-19 7.2E-24 182.0 29.4 339 104-493 49-401 (402)
108 COG1103 Archaea-specific pyrid 99.9 6.4E-19 1.4E-23 158.8 27.2 300 138-492 70-380 (382)
109 PRK05958 8-amino-7-oxononanoat 99.9 5.1E-19 1.1E-23 179.9 30.2 295 128-489 83-384 (385)
110 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 9E-21 1.9E-25 188.2 16.4 229 135-414 72-328 (417)
111 PRK13392 5-aminolevulinate syn 99.9 5.8E-19 1.2E-23 180.8 30.3 296 133-493 95-398 (410)
112 PRK09082 methionine aminotrans 99.9 3.2E-19 6.9E-24 181.2 28.2 325 105-488 47-385 (386)
113 TIGR03537 DapC succinyldiamino 99.9 9.6E-19 2.1E-23 175.4 31.1 322 106-488 18-349 (350)
114 PRK06225 aspartate aminotransf 99.9 4.4E-19 9.5E-24 179.9 28.9 324 103-494 43-378 (380)
115 TIGR01141 hisC histidinol-phos 99.9 4.8E-19 1.1E-23 177.4 28.8 283 134-487 59-346 (346)
116 PLN02231 alanine transaminase 99.9 3.6E-18 7.8E-23 178.5 36.3 334 118-495 161-530 (534)
117 PRK06290 aspartate aminotransf 99.9 1.1E-18 2.3E-23 178.1 31.7 321 120-493 77-406 (410)
118 TIGR00461 gcvP glycine dehydro 99.9 9.2E-19 2E-23 188.5 32.5 365 51-487 31-426 (939)
119 PRK12414 putative aminotransfe 99.9 3.3E-19 7E-24 181.0 27.4 327 103-488 44-383 (384)
120 TIGR01821 5aminolev_synth 5-am 99.9 1.3E-18 2.8E-23 177.9 31.8 296 132-493 93-397 (402)
121 PRK07568 aspartate aminotransf 99.9 2.4E-18 5.2E-23 175.7 33.5 329 103-494 45-394 (397)
122 PRK05957 aspartate aminotransf 99.9 1.7E-18 3.7E-23 176.0 32.1 333 103-495 42-388 (389)
123 TIGR01264 tyr_amTase_E tyrosin 99.8 2.3E-18 5E-23 175.9 33.0 341 102-493 49-400 (401)
124 PRK07309 aromatic amino acid a 99.8 2.2E-18 4.8E-23 175.3 31.9 334 104-493 46-389 (391)
125 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3.3E-19 7.2E-24 179.3 25.3 318 108-487 9-363 (363)
126 PRK08960 hypothetical protein; 99.8 1.6E-18 3.4E-23 176.2 30.6 327 103-490 47-385 (387)
127 TIGR01366 serC_3 phosphoserine 99.8 3.1E-19 6.6E-24 178.9 24.6 308 123-493 35-361 (361)
128 PRK06348 aspartate aminotransf 99.8 2.1E-18 4.7E-23 175.0 31.1 326 103-489 45-382 (384)
129 TIGR01825 gly_Cac_T_rel pyrido 99.8 2.3E-18 5E-23 175.1 31.4 306 121-493 70-382 (385)
130 KOG1368 Threonine aldolase [Am 99.8 8.3E-20 1.8E-24 166.7 18.4 302 119-488 50-364 (384)
131 KOG0259 Tyrosine aminotransfer 99.8 4.3E-18 9.2E-23 160.7 30.3 382 68-497 43-438 (447)
132 PRK15029 arginine decarboxylas 99.8 2.9E-18 6.3E-23 182.2 33.0 173 135-330 211-402 (755)
133 PRK07337 aminotransferase; Val 99.8 1.5E-18 3.2E-23 176.6 29.7 328 104-489 46-386 (388)
134 PRK07550 hypothetical protein; 99.8 4.2E-18 9.1E-23 173.1 32.5 330 103-490 44-385 (386)
135 PRK09064 5-aminolevulinate syn 99.8 2.3E-18 5E-23 176.3 30.7 296 132-493 94-398 (407)
136 TIGR03540 DapC_direct LL-diami 99.8 3E-18 6.5E-23 174.1 31.3 326 104-488 45-382 (383)
137 PRK05942 aspartate aminotransf 99.8 4E-18 8.6E-23 173.7 32.2 310 119-488 67-388 (394)
138 PLN02376 1-aminocyclopropane-1 99.8 2.9E-18 6.3E-23 178.2 31.5 322 121-492 90-438 (496)
139 PLN03226 serine hydroxymethylt 99.8 1.6E-18 3.5E-23 178.4 28.1 322 123-492 74-419 (475)
140 PRK08056 threonine-phosphate d 99.8 4.8E-18 1E-22 170.7 30.9 289 132-490 58-353 (356)
141 PRK08068 transaminase; Reviewe 99.8 5.1E-18 1.1E-22 172.6 31.1 322 106-488 50-385 (389)
142 PLN03227 serine palmitoyltrans 99.8 1.2E-17 2.6E-22 169.3 33.5 310 124-493 42-383 (392)
143 TIGR01364 serC_1 phosphoserine 99.8 5.9E-19 1.3E-23 175.6 23.5 308 124-492 32-348 (349)
144 PRK14807 histidinol-phosphate 99.8 1.1E-17 2.3E-22 167.8 32.7 288 126-489 60-349 (351)
145 TIGR00858 bioF 8-amino-7-oxono 99.8 4.1E-18 8.9E-23 171.6 29.7 292 129-487 61-360 (360)
146 PLN02450 1-aminocyclopropane-1 99.8 6E-18 1.3E-22 175.2 31.1 327 121-494 82-432 (468)
147 PRK09265 aminotransferase AlaT 99.8 4.7E-18 1E-22 173.7 30.0 320 119-493 66-402 (404)
148 PRK08861 cystathionine gamma-s 99.8 1.9E-18 4.1E-23 173.7 26.0 291 122-495 50-386 (388)
149 PRK08636 aspartate aminotransf 99.8 1.7E-17 3.7E-22 169.5 33.4 340 102-493 48-401 (403)
150 TIGR01328 met_gam_lyase methio 99.8 1.5E-18 3.2E-23 175.6 25.2 289 122-492 56-390 (391)
151 PRK07504 O-succinylhomoserine 99.8 2.7E-18 5.8E-23 174.1 27.0 234 123-426 63-319 (398)
152 PRK09276 LL-diaminopimelate am 99.8 3E-18 6.5E-23 174.2 27.5 326 103-488 46-384 (385)
153 PRK09147 succinyldiaminopimela 99.8 6.3E-18 1.4E-22 172.4 29.8 328 103-490 44-394 (396)
154 PRK06767 methionine gamma-lyas 99.8 1.4E-18 3.1E-23 175.8 24.7 287 123-492 59-385 (386)
155 PRK05968 hypothetical protein; 99.8 1.8E-18 4E-23 174.9 25.4 246 124-449 62-325 (389)
156 PRK06358 threonine-phosphate d 99.8 1.3E-17 2.8E-22 167.3 31.3 291 125-490 54-353 (354)
157 PLN02955 8-amino-7-oxononanoat 99.8 1.1E-17 2.5E-22 168.9 30.8 306 128-493 146-462 (476)
158 COG0403 GcvP Glycine cleavage 99.8 1.4E-17 3.1E-22 160.2 29.7 376 51-489 40-447 (450)
159 PRK10534 L-threonine aldolase; 99.8 1.2E-18 2.6E-23 173.6 23.3 311 102-490 13-331 (333)
160 PRK07366 succinyldiaminopimela 99.8 7.9E-18 1.7E-22 171.3 29.8 327 105-489 47-387 (388)
161 PRK08134 O-acetylhomoserine am 99.8 3.6E-18 7.8E-23 174.2 27.2 242 122-412 61-319 (433)
162 PF00155 Aminotran_1_2: Aminot 99.8 1.6E-18 3.4E-23 174.9 24.4 314 118-486 37-363 (363)
163 PRK07683 aminotransferase A; V 99.8 8.3E-18 1.8E-22 170.9 29.9 328 104-492 44-383 (387)
164 cd00617 Tnase_like Tryptophana 99.8 5.2E-18 1.1E-22 171.9 28.1 324 117-492 45-408 (431)
165 PRK06836 aspartate aminotransf 99.8 2.9E-17 6.3E-22 167.3 33.6 329 102-493 47-392 (394)
166 PRK05387 histidinol-phosphate 99.8 1.3E-17 2.8E-22 167.6 30.6 285 133-490 64-351 (353)
167 PRK13393 5-aminolevulinate syn 99.8 1.3E-17 2.7E-22 170.7 31.0 297 130-493 91-397 (406)
168 cd00614 CGS_like CGS_like: Cys 99.8 1.5E-18 3.3E-23 174.8 23.9 285 123-490 38-368 (369)
169 PRK08133 O-succinylhomoserine 99.8 4.3E-18 9.3E-23 172.3 27.0 219 123-412 59-283 (390)
170 KOG2862 Alanine-glyoxylate ami 99.8 6.9E-18 1.5E-22 155.2 25.0 343 94-492 20-382 (385)
171 PRK05613 O-acetylhomoserine am 99.8 2.9E-18 6.4E-23 174.7 24.9 242 123-412 67-328 (437)
172 PRK07811 cystathionine gamma-s 99.8 3.9E-18 8.4E-23 172.5 25.6 220 123-412 59-284 (388)
173 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.3E-17 2.8E-22 167.9 29.2 331 107-490 14-375 (376)
174 PRK06855 aminotransferase; Val 99.8 2.5E-17 5.5E-22 169.5 31.4 349 101-494 48-431 (433)
175 PRK04870 histidinol-phosphate 99.8 2.3E-17 5E-22 165.9 30.0 312 102-489 40-355 (356)
176 TIGR01329 cysta_beta_ly_E cyst 99.8 4.2E-18 9E-23 171.7 24.3 284 124-492 46-375 (378)
177 PLN02509 cystathionine beta-ly 99.8 4.4E-18 9.5E-23 173.9 24.7 216 130-412 134-355 (464)
178 PRK08776 cystathionine gamma-s 99.8 1.2E-17 2.5E-22 169.5 27.6 220 123-412 58-283 (405)
179 PLN02607 1-aminocyclopropane-1 99.8 4E-17 8.8E-22 167.8 30.8 320 124-495 94-440 (447)
180 PRK06234 methionine gamma-lyas 99.8 1.4E-17 3E-22 169.1 27.1 288 123-493 62-398 (400)
181 PRK07810 O-succinylhomoserine 99.8 1.5E-17 3.1E-22 168.8 26.7 235 122-426 67-324 (403)
182 PRK08574 cystathionine gamma-s 99.8 7.7E-18 1.7E-22 169.9 24.5 218 122-410 50-273 (385)
183 PRK08249 cystathionine gamma-s 99.8 1.2E-17 2.6E-22 169.1 25.8 290 122-494 61-395 (398)
184 PRK09028 cystathionine beta-ly 99.8 1.8E-17 3.8E-22 166.6 26.7 232 123-425 59-313 (394)
185 TIGR03538 DapC_gpp succinyldia 99.8 4.4E-17 9.5E-22 166.1 29.4 326 103-489 43-392 (393)
186 PRK00950 histidinol-phosphate 99.8 3.9E-17 8.4E-22 164.6 28.6 282 134-490 74-360 (361)
187 PRK08064 cystathionine beta-ly 99.8 1.9E-17 4.2E-22 167.5 26.1 286 123-489 52-383 (390)
188 PRK08248 O-acetylhomoserine am 99.8 1.5E-17 3.2E-22 169.7 25.3 239 122-412 61-319 (431)
189 PRK07050 cystathionine beta-ly 99.8 1.5E-17 3.2E-22 168.3 25.0 290 123-493 63-392 (394)
190 PRK01688 histidinol-phosphate 99.8 9.5E-18 2.1E-22 168.1 23.0 283 132-487 60-351 (351)
191 TIGR01324 cysta_beta_ly_B cyst 99.8 2.1E-17 4.6E-22 166.0 25.3 286 123-492 48-376 (377)
192 PRK09148 aminotransferase; Val 99.8 1.4E-16 3.1E-21 162.7 31.6 333 103-493 46-391 (405)
193 PRK03158 histidinol-phosphate 99.8 7.8E-17 1.7E-21 162.3 29.3 289 125-489 64-358 (359)
194 PRK07812 O-acetylhomoserine am 99.8 1.7E-17 3.6E-22 169.1 24.3 310 123-493 67-432 (436)
195 PRK07503 methionine gamma-lyas 99.8 2.9E-17 6.2E-22 166.9 26.0 221 123-412 63-289 (403)
196 PRK15399 lysine decarboxylase 99.8 2E-16 4.3E-21 166.5 32.8 299 136-491 202-558 (713)
197 PRK06084 O-acetylhomoserine am 99.8 4.3E-17 9.4E-22 166.2 27.2 308 123-492 56-422 (425)
198 PRK15407 lipopolysaccharide bi 99.8 8E-17 1.7E-21 164.9 29.2 327 123-491 61-435 (438)
199 PRK07269 cystathionine gamma-s 99.8 1.4E-17 3E-22 166.6 23.2 234 122-425 51-288 (364)
200 PRK06176 cystathionine gamma-s 99.8 2.4E-17 5.3E-22 166.0 25.0 286 122-492 47-378 (380)
201 PRK15481 transcriptional regul 99.8 4.7E-17 1E-21 167.8 27.7 303 120-491 116-430 (431)
202 PRK08114 cystathionine beta-ly 99.8 2.9E-17 6.2E-22 164.5 25.2 290 122-493 59-394 (395)
203 PRK15400 lysine decarboxylase 99.8 6.1E-17 1.3E-21 170.3 28.6 300 136-492 202-559 (714)
204 PRK08175 aminotransferase; Val 99.8 3.3E-16 7.2E-21 159.6 33.5 335 102-492 44-389 (395)
205 PLN02242 methionine gamma-lyas 99.8 3.7E-17 8E-22 166.3 26.2 223 123-413 74-303 (418)
206 PRK02731 histidinol-phosphate 99.8 1.4E-16 3.1E-21 160.8 30.4 288 134-491 72-365 (367)
207 PRK05994 O-acetylhomoserine am 99.8 2.8E-17 6.1E-22 168.0 25.2 239 123-412 61-318 (427)
208 PRK08045 cystathionine gamma-s 99.8 4.9E-17 1.1E-21 164.0 26.5 292 123-494 50-384 (386)
209 PRK08247 cystathionine gamma-s 99.8 2.9E-17 6.3E-22 165.1 24.7 232 123-425 50-288 (366)
210 PRK13578 ornithine decarboxyla 99.8 1.2E-16 2.6E-21 168.3 30.2 230 136-413 181-446 (720)
211 PRK05166 histidinol-phosphate 99.8 1.5E-16 3.3E-21 160.7 29.6 287 134-490 76-369 (371)
212 PRK07908 hypothetical protein; 99.8 1E-16 2.2E-21 160.7 27.9 304 102-491 36-346 (349)
213 PRK04635 histidinol-phosphate 99.8 3.3E-17 7.2E-22 164.5 24.4 284 127-489 62-352 (354)
214 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 5.3E-17 1.2E-21 164.1 25.7 304 132-490 34-374 (375)
215 PRK07671 cystathionine beta-ly 99.8 4.5E-17 9.8E-22 164.0 24.5 219 123-412 48-272 (377)
216 KOG0257 Kynurenine aminotransf 99.8 2.9E-17 6.3E-22 157.9 21.8 367 71-487 18-414 (420)
217 TIGR01325 O_suc_HS_sulf O-succ 99.8 6E-17 1.3E-21 163.6 25.4 219 123-412 52-276 (380)
218 PRK05939 hypothetical protein; 99.8 1.4E-17 3E-22 168.5 20.6 240 122-411 44-289 (397)
219 TIGR02080 O_succ_thio_ly O-suc 99.8 9.9E-17 2.1E-21 161.7 26.4 223 123-412 49-274 (382)
220 PLN03026 histidinol-phosphate 99.8 7.2E-16 1.6E-20 156.1 31.6 286 134-489 91-379 (380)
221 PLN02672 methionine S-methyltr 99.8 2.9E-16 6.3E-21 171.9 30.4 338 102-491 711-1079(1082)
222 PLN02271 serine hydroxymethylt 99.8 6.8E-17 1.5E-21 163.9 23.4 328 121-491 186-539 (586)
223 PRK02610 histidinol-phosphate 99.8 9.1E-16 2E-20 155.2 31.4 318 105-493 45-372 (374)
224 PRK09105 putative aminotransfe 99.8 6E-16 1.3E-20 156.1 29.8 280 134-490 83-368 (370)
225 PRK06702 O-acetylhomoserine am 99.8 1E-16 2.2E-21 162.4 24.1 242 123-412 59-316 (432)
226 TIGR01140 L_thr_O3P_dcar L-thr 99.8 2.6E-16 5.7E-21 156.3 26.2 273 132-486 50-329 (330)
227 PRK06434 cystathionine gamma-l 99.8 1E-16 2.2E-21 160.6 23.0 232 121-425 60-308 (384)
228 PLN02368 alanine transaminase 99.8 6.2E-16 1.3E-20 157.0 28.7 280 102-422 82-392 (407)
229 PRK03317 histidinol-phosphate 99.8 1.7E-15 3.7E-20 153.0 31.5 296 124-492 64-364 (368)
230 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.3E-15 4.9E-20 150.3 31.6 322 119-492 65-426 (450)
231 PRK00854 rocD ornithine--oxo-a 99.8 1.7E-15 3.6E-20 154.9 31.5 299 124-490 82-399 (401)
232 PRK07582 cystathionine gamma-l 99.8 1.9E-16 4E-21 159.1 23.8 229 123-425 49-300 (366)
233 PRK07590 L,L-diaminopimelate a 99.8 3.6E-15 7.8E-20 152.7 33.6 357 67-489 15-408 (409)
234 PRK04781 histidinol-phosphate 99.8 1.3E-15 2.7E-20 153.5 29.7 289 134-490 64-361 (364)
235 PRK03321 putative aminotransfe 99.8 5.4E-16 1.2E-20 155.7 26.9 288 125-491 57-350 (352)
236 PRK03244 argD acetylornithine 99.7 2.4E-15 5.1E-20 153.6 31.5 294 132-494 88-396 (398)
237 PRK06460 hypothetical protein; 99.7 4.3E-16 9.4E-21 156.9 25.4 288 122-493 42-375 (376)
238 PRK01533 histidinol-phosphate 99.7 9.2E-16 2E-20 154.4 27.7 288 125-496 64-359 (366)
239 PRK06425 histidinol-phosphate 99.7 1.2E-15 2.7E-20 151.7 28.3 278 134-490 45-331 (332)
240 PRK08153 histidinol-phosphate 99.7 2.2E-15 4.7E-20 152.1 30.4 296 127-495 69-368 (369)
241 TIGR03576 pyridox_MJ0158 pyrid 99.7 1.6E-15 3.5E-20 150.8 28.6 330 68-489 6-344 (346)
242 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 3.5E-16 7.7E-21 159.8 24.4 239 123-412 55-311 (418)
243 cd00610 OAT_like Acetyl ornith 99.7 3.7E-15 8.1E-20 153.0 31.9 316 127-489 77-412 (413)
244 PRK12566 glycine dehydrogenase 99.7 1.6E-15 3.4E-20 162.7 29.1 362 51-487 46-439 (954)
245 PRK05967 cystathionine beta-ly 99.7 1E-15 2.2E-20 153.6 25.0 290 123-493 62-392 (395)
246 cd01494 AAT_I Aspartate aminot 99.7 5.3E-17 1.2E-21 144.8 14.2 166 133-328 4-170 (170)
247 PLN02452 phosphoserine transam 99.7 1.9E-15 4.2E-20 150.4 26.6 339 91-492 7-363 (365)
248 PTZ00376 aspartate aminotransf 99.7 3.7E-15 8.1E-20 152.3 29.3 323 105-491 51-402 (404)
249 TIGR01365 serC_2 phosphoserine 99.7 4.7E-16 1E-20 154.8 21.9 340 102-491 15-372 (374)
250 PRK05839 hypothetical protein; 99.7 4.2E-15 9E-20 150.3 29.2 317 104-491 40-373 (374)
251 PRK09275 aspartate aminotransf 99.7 2.3E-15 5.1E-20 155.5 27.6 361 101-494 113-519 (527)
252 PRK14809 histidinol-phosphate 99.7 9.3E-15 2E-19 147.0 31.1 286 125-490 65-355 (357)
253 PRK04073 rocD ornithine--oxo-a 99.7 7.9E-15 1.7E-19 149.5 30.7 295 132-490 85-395 (396)
254 PRK04311 selenocysteine syntha 99.7 6.6E-15 1.4E-19 150.7 29.8 284 133-490 131-462 (464)
255 PRK13237 tyrosine phenol-lyase 99.7 2.1E-14 4.7E-19 143.8 32.4 323 118-492 71-433 (460)
256 PRK07505 hypothetical protein; 99.7 8.5E-15 1.8E-19 149.6 30.4 300 127-492 89-399 (402)
257 PRK07865 N-succinyldiaminopime 99.7 4.3E-15 9.3E-20 149.9 27.8 308 104-487 43-363 (364)
258 TIGR03539 DapC_actino succinyl 99.7 6.1E-15 1.3E-19 148.3 28.8 306 105-486 38-356 (357)
259 TIGR03246 arg_catab_astC succi 99.7 1.5E-14 3.2E-19 147.3 30.7 300 132-493 80-396 (397)
260 TIGR00474 selA seryl-tRNA(sec) 99.7 1.3E-14 2.8E-19 148.0 30.1 162 132-330 125-303 (454)
261 PTZ00125 ornithine aminotransf 99.7 2E-14 4.4E-19 146.9 31.5 309 130-493 74-396 (400)
262 PRK09440 avtA valine--pyruvate 99.7 1E-14 2.2E-19 149.8 29.4 342 103-497 47-416 (416)
263 COG1167 ARO8 Transcriptional r 99.7 3.5E-14 7.6E-19 146.5 33.1 334 104-495 107-458 (459)
264 TIGR03801 asp_4_decarbox aspar 99.7 8.3E-15 1.8E-19 151.3 27.6 358 103-495 109-519 (521)
265 KOG1359 Glycine C-acetyltransf 99.7 8.9E-15 1.9E-19 133.7 24.3 297 127-493 110-413 (417)
266 PF01212 Beta_elim_lyase: Beta 99.7 4E-17 8.7E-22 157.1 9.8 251 115-418 19-281 (290)
267 PRK07392 threonine-phosphate d 99.7 4.3E-14 9.3E-19 142.3 32.0 289 127-490 59-357 (360)
268 TIGR00707 argD acetylornithine 99.7 2.5E-14 5.4E-19 145.2 30.1 299 129-489 69-378 (379)
269 PRK08637 hypothetical protein; 99.7 1.2E-14 2.7E-19 147.7 27.4 337 102-493 21-387 (388)
270 PRK09257 aromatic amino acid a 99.7 2.7E-14 5.9E-19 145.6 29.9 320 104-489 47-395 (396)
271 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.9E-15 1.3E-19 147.6 23.3 288 122-491 52-386 (386)
272 PRK03967 histidinol-phosphate 99.7 7.5E-14 1.6E-18 139.1 30.7 278 125-492 55-334 (337)
273 KOG0256 1-aminocyclopropane-1- 99.7 2.4E-14 5.1E-19 136.9 25.2 324 123-492 119-461 (471)
274 PRK14808 histidinol-phosphate 99.7 5.8E-14 1.3E-18 139.7 28.9 277 125-489 56-334 (335)
275 TIGR01885 Orn_aminotrans ornit 99.7 3.3E-13 7.1E-18 137.9 35.1 301 131-490 81-400 (401)
276 COG0079 HisC Histidinol-phosph 99.7 1.4E-13 3E-18 136.6 30.7 289 126-492 58-354 (356)
277 PRK01278 argD acetylornithine 99.7 1.3E-13 2.9E-18 140.2 31.3 293 132-492 76-388 (389)
278 COG2873 MET17 O-acetylhomoseri 99.7 4.5E-14 9.8E-19 133.7 25.0 307 120-491 57-424 (426)
279 PF00464 SHMT: Serine hydroxym 99.7 1.9E-14 4E-19 142.8 23.4 307 121-485 58-398 (399)
280 PRK02936 argD acetylornithine 99.7 7.8E-14 1.7E-18 141.4 28.3 298 127-489 69-376 (377)
281 KOG1360 5-aminolevulinate synt 99.7 3.6E-14 7.8E-19 134.8 23.5 299 126-493 217-525 (570)
282 PRK05093 argD bifunctional N-s 99.7 3.3E-13 7.2E-18 137.9 32.7 298 133-494 86-402 (403)
283 PRK02627 acetylornithine amino 99.7 1.6E-13 3.5E-18 140.1 30.4 303 128-493 80-395 (396)
284 PF05889 SLA_LP_auto_ag: Solub 99.7 1.4E-14 3E-19 140.6 20.8 314 126-491 53-389 (389)
285 PLN02397 aspartate transaminas 99.6 2.5E-13 5.3E-18 139.4 31.0 321 105-491 70-420 (423)
286 COG0112 GlyA Glycine/serine hy 99.6 3.7E-14 8E-19 135.8 22.9 314 120-492 63-390 (413)
287 PRK08354 putative aminotransfe 99.6 1.3E-13 2.8E-18 135.9 26.7 148 134-327 45-196 (311)
288 PLN02624 ornithine-delta-amino 99.6 7.9E-13 1.7E-17 137.2 33.6 307 131-492 119-444 (474)
289 PRK07049 methionine gamma-lyas 99.6 1.8E-13 3.8E-18 140.0 28.2 225 123-412 81-317 (427)
290 PRK12462 phosphoserine aminotr 99.6 6.5E-14 1.4E-18 138.0 24.0 338 92-492 5-362 (364)
291 TIGR03542 DAPAT_plant LL-diami 99.6 3.4E-13 7.4E-18 137.8 30.3 302 120-489 70-401 (402)
292 PRK03715 argD acetylornithine 99.6 3.8E-13 8.3E-18 136.4 29.4 308 127-493 76-394 (395)
293 PRK12381 bifunctional succinyl 99.6 3.9E-13 8.4E-18 137.3 29.3 302 133-497 85-404 (406)
294 PRK06959 putative threonine-ph 99.6 4E-13 8.8E-18 133.8 28.1 277 132-497 56-338 (339)
295 PRK05664 threonine-phosphate d 99.6 6.4E-13 1.4E-17 132.1 27.3 268 134-492 54-328 (330)
296 KOG2040 Glycine dehydrogenase 99.6 1.7E-13 3.6E-18 137.2 22.8 327 122-493 575-919 (1001)
297 COG3844 Kynureninase [Amino ac 99.6 5.5E-13 1.2E-17 124.0 24.0 315 125-494 72-404 (407)
298 PRK05964 adenosylmethionine--8 99.6 4.8E-12 1E-16 130.0 32.5 316 129-493 85-423 (423)
299 COG0626 MetC Cystathionine bet 99.6 1.1E-12 2.4E-17 129.7 26.1 289 122-493 60-395 (396)
300 PRK09264 diaminobutyrate--2-ox 99.6 1.4E-11 3.1E-16 126.3 34.4 317 129-496 82-420 (425)
301 PRK11522 putrescine--2-oxoglut 99.6 1.1E-11 2.5E-16 127.6 33.2 313 128-494 123-453 (459)
302 COG1982 LdcC Arginine/lysine/o 99.6 9.1E-13 2E-17 133.7 23.5 230 135-415 76-321 (557)
303 PRK04260 acetylornithine amino 99.5 1.1E-11 2.4E-16 125.5 31.1 277 156-489 87-374 (375)
304 KOG0630 Predicted pyridoxal-de 99.5 2.2E-13 4.7E-18 132.5 15.9 266 127-413 163-440 (838)
305 PRK08117 4-aminobutyrate amino 99.5 6.5E-11 1.4E-15 122.0 34.5 318 129-495 86-432 (433)
306 TIGR03372 putres_am_tran putre 99.5 1.1E-10 2.4E-15 119.4 35.0 307 128-489 116-441 (442)
307 KOG1357 Serine palmitoyltransf 99.5 1.5E-12 3.2E-17 126.1 19.2 344 87-493 141-503 (519)
308 PLN02760 4-aminobutyrate:pyruv 99.5 7.8E-11 1.7E-15 122.6 33.2 330 128-493 132-492 (504)
309 KOG0634 Aromatic amino acid am 99.5 4.6E-11 9.9E-16 115.6 28.4 333 120-496 95-470 (472)
310 COG4992 ArgD Ornithine/acetylo 99.5 9.4E-12 2E-16 121.1 24.0 296 133-495 88-401 (404)
311 PRK05769 4-aminobutyrate amino 99.5 2.7E-10 5.8E-15 117.2 36.3 315 128-493 96-440 (441)
312 PRK12403 putative aminotransfe 99.5 1.5E-10 3.3E-15 119.7 34.3 324 128-496 97-456 (460)
313 COG0160 GabT 4-aminobutyrate a 99.5 1.1E-10 2.4E-15 117.1 31.8 317 133-493 103-446 (447)
314 PRK04612 argD acetylornithine 99.5 1.9E-10 4E-15 117.2 34.1 306 129-496 82-407 (408)
315 COG0001 HemL Glutamate-1-semia 99.5 4.6E-11 9.9E-16 117.6 28.0 310 127-495 91-431 (432)
316 PRK08360 4-aminobutyrate amino 99.5 4.6E-10 1E-14 115.5 36.2 320 129-495 84-429 (443)
317 PRK06058 4-aminobutyrate amino 99.5 3E-10 6.5E-15 117.2 34.4 322 128-493 98-443 (443)
318 TIGR02407 ectoine_ectB diamino 99.5 2.8E-10 6.2E-15 116.2 33.8 311 128-491 77-411 (412)
319 PRK06541 hypothetical protein; 99.5 5.1E-10 1.1E-14 115.7 34.9 331 129-495 95-458 (460)
320 PRK08088 4-aminobutyrate amino 99.5 2.7E-10 5.8E-15 117.2 32.8 317 130-493 85-424 (425)
321 TIGR00713 hemL glutamate-1-sem 99.5 5.4E-11 1.2E-15 122.4 27.7 308 132-492 91-422 (423)
322 KOG0053 Cystathionine beta-lya 99.4 1.4E-11 3E-16 120.4 21.5 220 123-412 75-300 (409)
323 TIGR02617 tnaA_trp_ase tryptop 99.4 9.8E-11 2.1E-15 116.2 26.4 331 117-492 66-441 (467)
324 TIGR00700 GABAtrnsam 4-aminobu 99.4 1.1E-09 2.4E-14 112.3 35.4 311 131-490 78-418 (420)
325 PLN00144 acetylornithine trans 99.4 7.4E-10 1.6E-14 112.1 32.3 300 129-493 57-381 (382)
326 PRK07678 aminotransferase; Val 99.4 1.9E-09 4.2E-14 111.2 35.8 327 129-493 89-450 (451)
327 PRK13360 omega amino acid--pyr 99.4 9.5E-10 2.1E-14 113.1 33.4 322 129-493 89-441 (442)
328 PRK00062 glutamate-1-semialdeh 99.4 2.1E-10 4.6E-15 117.8 28.1 309 129-493 90-425 (426)
329 PRK06105 aminotransferase; Pro 99.4 1.1E-09 2.3E-14 113.4 33.2 328 128-495 91-452 (460)
330 PRK06777 4-aminobutyrate amino 99.4 2.1E-09 4.5E-14 110.2 35.1 314 131-490 85-419 (421)
331 PRK07495 4-aminobutyrate amino 99.4 6.1E-09 1.3E-13 106.7 38.0 317 129-495 83-424 (425)
332 PRK08593 4-aminobutyrate amino 99.4 4.4E-09 9.5E-14 108.4 36.8 321 129-495 85-432 (445)
333 PRK12389 glutamate-1-semialdeh 99.4 2.3E-09 5E-14 110.1 34.3 303 128-492 92-427 (428)
334 PRK09221 beta alanine--pyruvat 99.4 1.8E-09 4E-14 111.1 33.5 326 129-493 92-444 (445)
335 PRK05639 4-aminobutyrate amino 99.4 2.7E-09 5.8E-14 110.1 34.3 318 130-494 97-445 (457)
336 PRK05965 hypothetical protein; 99.4 3.8E-09 8.3E-14 109.2 35.4 334 129-498 90-453 (459)
337 PRK06062 hypothetical protein; 99.4 3.8E-09 8.2E-14 109.0 35.3 319 128-495 94-448 (451)
338 PLN02482 glutamate-1-semialdeh 99.4 2.2E-09 4.9E-14 110.8 33.1 309 128-493 138-474 (474)
339 TIGR00709 dat 2,4-diaminobutyr 99.4 2.6E-09 5.7E-14 110.1 32.6 325 128-496 81-439 (442)
340 PRK04013 argD acetylornithine/ 99.4 8.4E-10 1.8E-14 110.3 27.8 280 134-495 71-363 (364)
341 KOG0258 Alanine aminotransfera 99.3 2.4E-09 5.2E-14 102.3 28.9 340 117-493 105-470 (475)
342 PRK06149 hypothetical protein; 99.3 5.7E-09 1.2E-13 117.4 37.1 319 130-492 625-970 (972)
343 PRK09792 4-aminobutyrate trans 99.3 1.6E-08 3.5E-13 103.7 37.0 314 128-491 82-420 (421)
344 PRK07482 hypothetical protein; 99.3 7.5E-09 1.6E-13 107.1 34.5 330 128-496 93-458 (461)
345 PRK07480 putative aminotransfe 99.3 7.9E-09 1.7E-13 106.7 34.6 329 128-496 93-452 (456)
346 PRK07036 hypothetical protein; 99.3 7.4E-09 1.6E-13 107.2 34.4 328 128-494 94-454 (466)
347 PRK00615 glutamate-1-semialdeh 99.3 5.2E-09 1.1E-13 107.2 32.7 317 128-494 92-430 (433)
348 COG3977 Alanine-alpha-ketoisov 99.3 2.8E-10 6.1E-15 104.9 19.8 320 118-496 67-415 (417)
349 PRK07481 hypothetical protein; 99.3 1.5E-08 3.3E-13 104.6 35.2 334 128-493 85-446 (449)
350 PRK06918 4-aminobutyrate amino 99.3 1.7E-08 3.8E-13 104.5 35.0 320 128-495 96-446 (451)
351 TIGR00508 bioA adenosylmethion 99.3 5.9E-09 1.3E-13 106.9 30.9 311 131-491 90-425 (427)
352 PRK06173 adenosylmethionine--8 99.3 9E-09 1.9E-13 105.5 31.7 318 129-495 87-428 (429)
353 PRK06148 hypothetical protein; 99.3 2.7E-08 5.8E-13 112.1 38.2 324 128-494 662-1012(1013)
354 PRK06917 hypothetical protein; 99.3 3.4E-08 7.4E-13 101.8 35.9 334 128-496 73-441 (447)
355 PRK06943 adenosylmethionine--8 99.3 2.2E-08 4.9E-13 103.3 34.6 326 129-496 97-450 (453)
356 TIGR00699 GABAtrns_euk 4-amino 99.3 1.9E-08 4E-13 103.4 33.2 309 126-489 102-463 (464)
357 PRK06082 4-aminobutyrate amino 99.3 4.6E-08 1E-12 101.1 36.4 314 128-496 112-455 (459)
358 PRK06938 diaminobutyrate--2-ox 99.3 1.4E-08 3E-13 105.0 32.2 302 157-495 130-463 (464)
359 PRK07483 hypothetical protein; 99.3 2.5E-08 5.5E-13 102.7 33.7 331 129-495 73-440 (443)
360 PRK07046 aminotransferase; Val 99.3 3.5E-08 7.6E-13 101.8 34.1 309 128-494 114-452 (453)
361 PRK07030 adenosylmethionine--8 99.2 4.4E-08 9.5E-13 101.4 34.3 328 128-494 89-448 (466)
362 PRK08297 L-lysine aminotransfe 99.2 2.8E-08 6E-13 102.4 32.3 296 156-493 113-442 (443)
363 PRK07986 adenosylmethionine--8 99.2 1.8E-08 4E-13 103.1 30.7 313 129-491 86-422 (428)
364 PRK06931 diaminobutyrate--2-ox 99.2 8.6E-08 1.9E-12 99.1 35.4 322 128-495 100-457 (459)
365 PRK06916 adenosylmethionine--8 99.2 9.7E-08 2.1E-12 98.8 35.8 332 128-495 98-458 (460)
366 PRK08742 adenosylmethionine--8 99.2 7.1E-08 1.5E-12 99.9 34.0 327 129-495 107-470 (472)
367 KOG2467 Glycine/serine hydroxy 99.2 6.7E-09 1.5E-13 98.4 22.9 324 122-490 79-424 (477)
368 PRK05630 adenosylmethionine--8 99.2 4.8E-08 1.1E-12 99.9 30.0 307 130-491 84-419 (422)
369 KOG1358 Serine palmitoyltransf 99.2 3.1E-09 6.8E-14 101.6 19.4 307 127-493 141-466 (467)
370 TIGR03251 LAT_fam L-lysine 6-t 99.2 5.5E-08 1.2E-12 100.0 30.3 289 156-488 106-430 (431)
371 COG1932 SerC Phosphoserine ami 99.1 1.2E-08 2.6E-13 97.7 22.3 306 124-492 45-363 (365)
372 PRK06209 glutamate-1-semialdeh 99.1 4.4E-08 9.6E-13 100.7 28.3 304 129-494 88-407 (431)
373 COG0161 BioA Adenosylmethionin 99.1 2.5E-07 5.5E-12 92.6 29.5 320 136-496 94-447 (449)
374 COG3033 TnaA Tryptophanase [Am 99.1 8.8E-08 1.9E-12 90.9 23.4 329 117-492 71-444 (471)
375 KOG3843 Predicted serine hydro 99.0 3.7E-09 8.1E-14 95.9 10.8 233 127-405 55-295 (432)
376 COG1448 TyrB Aspartate/tyrosin 99.0 5.5E-07 1.2E-11 86.9 25.9 311 120-489 64-395 (396)
377 KOG3846 L-kynurenine hydrolase 98.9 3.5E-07 7.5E-12 85.0 21.4 323 131-494 113-463 (465)
378 KOG1404 Alanine-glyoxylate ami 98.9 7E-07 1.5E-11 85.9 23.3 286 156-486 112-432 (442)
379 KOG1401 Acetylornithine aminot 98.9 6.1E-06 1.3E-10 80.2 29.1 301 155-494 118-432 (433)
380 PLN02974 adenosylmethionine-8- 98.8 1.1E-05 2.4E-10 88.2 33.6 231 231-490 567-816 (817)
381 KOG0633 Histidinol phosphate a 98.8 2.3E-07 4.9E-12 84.3 15.9 253 189-489 112-374 (375)
382 COG1921 SelA Selenocysteine sy 98.8 2.7E-07 5.8E-12 90.3 17.4 151 156-330 86-238 (395)
383 KOG2040 Glycine dehydrogenase 98.8 9.4E-07 2E-11 89.7 20.6 367 51-488 85-479 (1001)
384 PF12897 Aminotran_MocR: Alani 98.8 4E-06 8.7E-11 81.2 24.0 303 135-491 75-414 (425)
385 KOG1402 Ornithine aminotransfe 98.8 4.4E-06 9.6E-11 78.6 23.3 297 135-490 107-425 (427)
386 PF00202 Aminotran_3: Aminotra 98.7 4.3E-06 9.4E-11 83.2 24.3 189 128-330 58-262 (339)
387 PF03841 SelA: L-seryl-tRNA se 98.5 1.3E-07 2.7E-12 91.9 5.2 161 134-330 52-228 (367)
388 KOG2790 Phosphoserine aminotra 98.3 0.00023 4.9E-09 66.0 19.8 343 95-492 11-368 (370)
389 PF06838 Met_gamma_lyase: Meth 98.2 0.00028 6E-09 68.3 19.8 169 126-332 55-241 (403)
390 KOG1403 Predicted alanine-glyo 97.5 0.022 4.8E-07 53.5 19.8 301 156-491 105-436 (452)
391 KOG1412 Aspartate aminotransfe 97.5 0.013 2.8E-07 55.4 17.7 285 154-494 100-407 (410)
392 KOG1405 4-aminobutyrate aminot 97.2 0.022 4.9E-07 54.8 16.0 221 229-492 254-483 (484)
393 COG4100 Cystathionine beta-lya 96.9 0.02 4.4E-07 53.9 12.6 154 128-317 68-236 (416)
394 KOG1411 Aspartate aminotransfe 96.4 0.035 7.6E-07 53.3 10.9 260 187-491 145-424 (427)
395 PF04864 Alliinase_C: Allinase 96.1 0.17 3.7E-06 49.1 14.0 295 127-489 45-362 (363)
396 PLN02994 1-aminocyclopropane-1 91.9 0.42 9E-06 41.5 5.9 63 121-199 88-152 (153)
397 COG2515 Acd 1-aminocyclopropan 86.6 9.8 0.00021 36.6 11.0 117 157-287 67-191 (323)
398 PF06506 PrpR_N: Propionate ca 70.3 17 0.00036 32.3 6.9 71 187-281 78-148 (176)
399 COG0386 BtuE Glutathione perox 70.3 35 0.00075 29.4 8.2 95 214-317 27-133 (162)
400 TIGR03573 WbuX N-acetyl sugar 65.5 1.5E+02 0.0032 29.5 13.2 104 155-287 62-171 (343)
401 cd01455 vWA_F11C1-5a_type Von 63.3 24 0.00052 31.8 6.4 53 231-283 95-149 (191)
402 TIGR03679 arCOG00187 arCOG0018 60.5 1.1E+02 0.0024 28.2 10.6 99 157-279 2-115 (218)
403 COG0108 RibB 3,4-dihydroxy-2-b 58.7 26 0.00056 31.6 5.6 49 232-281 142-190 (203)
404 smart00642 Aamy Alpha-amylase 56.8 25 0.00055 30.9 5.4 30 257-286 64-93 (166)
405 PF07071 DUF1341: Protein of u 55.4 38 0.00081 30.6 6.0 70 200-282 136-208 (218)
406 TIGR01275 ACC_deam_rel pyridox 52.1 71 0.0015 31.2 8.3 54 157-220 59-113 (311)
407 PRK12595 bifunctional 3-deoxy- 52.0 1.5E+02 0.0034 29.7 10.6 82 198-288 214-299 (360)
408 COG0296 GlgB 1,4-alpha-glucan 51.7 11 0.00024 40.4 2.6 65 208-288 175-239 (628)
409 COG0329 DapA Dihydrodipicolina 51.7 22 0.00048 34.6 4.6 62 218-281 14-78 (299)
410 PF00926 DHBP_synthase: 3,4-di 51.4 36 0.00078 30.7 5.5 50 230-280 136-185 (194)
411 cd00950 DHDPS Dihydrodipicolin 50.5 36 0.00079 32.7 5.9 57 217-275 9-65 (284)
412 COG3453 Uncharacterized protei 49.8 50 0.0011 27.1 5.4 77 194-277 43-127 (130)
413 KOG0630 Predicted pyridoxal-de 49.0 1E+02 0.0023 31.8 8.7 61 433-496 637-698 (838)
414 TIGR03581 EF_0839 conserved hy 48.2 83 0.0018 28.8 7.1 73 200-285 136-211 (236)
415 COG2870 RfaE ADP-heptose synth 48.1 31 0.00067 34.6 4.8 95 194-297 97-198 (467)
416 PRK10638 glutaredoxin 3; Provi 47.3 1E+02 0.0022 23.2 6.8 68 188-268 3-72 (83)
417 PRK11633 cell division protein 47.2 84 0.0018 29.2 7.3 51 437-489 161-213 (226)
418 TIGR02189 GlrX-like_plant Glut 46.9 95 0.002 24.5 6.8 72 187-268 8-81 (99)
419 PF03162 Y_phosphatase2: Tyros 46.3 35 0.00076 29.9 4.6 86 185-279 32-119 (164)
420 cd01994 Alpha_ANH_like_IV This 46.1 2.3E+02 0.0049 25.6 10.8 102 156-280 3-118 (194)
421 TIGR00506 ribB 3,4-dihydroxy-2 45.9 56 0.0012 29.6 5.8 51 229-280 140-190 (199)
422 cd00951 KDGDH 5-dehydro-4-deox 45.6 66 0.0014 31.1 6.8 62 218-281 10-74 (289)
423 PF00106 adh_short: short chai 43.4 1.6E+02 0.0035 25.0 8.5 54 214-272 53-108 (167)
424 TIGR00674 dapA dihydrodipicoli 43.2 48 0.001 32.0 5.5 59 215-275 5-63 (285)
425 PRK03620 5-dehydro-4-deoxygluc 42.8 58 0.0013 31.7 6.0 62 218-281 17-81 (303)
426 PRK00910 ribB 3,4-dihydroxy-2- 42.4 68 0.0015 29.5 5.9 47 232-279 154-200 (218)
427 COG1105 FruK Fructose-1-phosph 42.2 73 0.0016 31.1 6.4 59 226-285 109-168 (310)
428 cd00408 DHDPS-like Dihydrodipi 41.0 46 0.00099 32.0 4.9 64 216-281 5-71 (281)
429 PRK03170 dihydrodipicolinate s 40.9 47 0.001 32.1 5.0 58 216-275 9-66 (292)
430 TIGR01274 ACC_deam 1-aminocycl 40.8 1.4E+02 0.003 29.6 8.4 55 157-221 69-131 (337)
431 PRK00014 ribB 3,4-dihydroxy-2- 40.7 74 0.0016 29.5 5.8 48 233-282 159-206 (230)
432 TIGR03249 KdgD 5-dehydro-4-deo 40.6 47 0.001 32.3 4.9 57 217-275 14-70 (296)
433 PRK01792 ribB 3,4-dihydroxy-2- 40.5 75 0.0016 29.2 5.8 49 230-279 151-199 (214)
434 PF08659 KR: KR domain; Inter 40.1 1.4E+02 0.0029 26.5 7.5 69 188-264 26-99 (181)
435 COG0027 PurT Formate-dependent 40.0 88 0.0019 30.5 6.3 83 188-284 75-157 (394)
436 PRK03353 ribB 3,4-dihydroxy-2- 39.9 76 0.0017 29.3 5.9 50 232-283 153-202 (217)
437 TIGR02026 BchE magnesium-proto 39.9 1.2E+02 0.0026 31.9 8.2 64 214-288 39-104 (497)
438 KOG0369 Pyruvate carboxylase [ 39.7 96 0.0021 33.4 7.0 32 259-290 167-198 (1176)
439 PF00128 Alpha-amylase: Alpha 39.7 19 0.0004 34.8 2.0 33 254-286 43-75 (316)
440 PRK09441 cytoplasmic alpha-amy 39.7 21 0.00045 37.4 2.5 30 256-285 74-103 (479)
441 TIGR01244 conserved hypothetic 39.6 1.6E+02 0.0034 24.7 7.4 69 202-278 50-127 (135)
442 TIGR00683 nanA N-acetylneurami 39.1 67 0.0015 31.1 5.7 63 217-281 9-75 (290)
443 TIGR01361 DAHP_synth_Bsub phos 38.8 3.5E+02 0.0076 25.7 10.8 85 195-288 118-206 (260)
444 PF00701 DHDPS: Dihydrodipicol 38.2 54 0.0012 31.7 5.0 62 218-281 11-75 (289)
445 PRK04147 N-acetylneuraminate l 37.9 59 0.0013 31.5 5.2 63 217-281 12-78 (293)
446 cd00952 CHBPH_aldolase Trans-o 37.2 70 0.0015 31.3 5.6 56 226-281 24-82 (309)
447 cd00886 MogA_MoaB MogA_MoaB fa 37.1 1.8E+02 0.0039 25.0 7.6 62 198-269 22-83 (152)
448 COG2102 Predicted ATPases of P 36.9 1.6E+02 0.0034 27.2 7.2 98 156-279 4-115 (223)
449 PLN02417 dihydrodipicolinate s 36.9 60 0.0013 31.2 5.0 63 217-281 10-75 (280)
450 TIGR00381 cdhD CO dehydrogenas 36.9 1.9E+02 0.004 29.2 8.3 47 227-283 200-247 (389)
451 COG0300 DltE Short-chain dehyd 36.2 3.5E+02 0.0076 25.8 9.8 78 187-272 30-112 (265)
452 cd00758 MoCF_BD MoCF_BD: molyb 36.2 1.7E+02 0.0036 24.4 7.1 61 197-269 20-80 (133)
453 COG1066 Sms Predicted ATP-depe 35.6 3.3E+02 0.0073 27.8 9.8 89 188-288 121-228 (456)
454 TIGR02313 HpaI-NOT-DapA 2,4-di 35.2 68 0.0015 31.1 5.1 63 216-280 8-73 (294)
455 CHL00073 chlN photochlorophyll 34.1 79 0.0017 32.8 5.5 52 229-282 81-134 (457)
456 PRK13396 3-deoxy-7-phosphohept 33.6 4.3E+02 0.0093 26.4 10.3 83 198-289 197-284 (352)
457 TIGR02402 trehalose_TreZ malto 33.2 30 0.00065 36.9 2.4 33 254-286 151-183 (542)
458 COG1954 GlpP Glycerol-3-phosph 32.6 37 0.00081 29.7 2.4 48 229-287 12-61 (181)
459 TIGR00177 molyb_syn molybdenum 31.1 2.8E+02 0.006 23.5 7.7 62 197-270 28-89 (144)
460 TIGR01536 asn_synth_AEB aspara 30.7 6.3E+02 0.014 26.2 12.7 126 127-284 235-364 (467)
461 cd00954 NAL N-Acetylneuraminic 30.7 90 0.0019 30.1 5.1 63 217-281 9-75 (288)
462 COG0367 AsnB Asparagine syntha 29.6 4.1E+02 0.0089 28.4 10.2 126 128-288 213-349 (542)
463 TIGR00334 5S_RNA_mat_M5 ribonu 29.4 54 0.0012 29.0 2.9 51 227-288 11-61 (174)
464 PF10022 DUF2264: Uncharacteri 28.8 4E+02 0.0087 26.7 9.4 125 18-145 2-148 (361)
465 PRK13397 3-deoxy-7-phosphohept 28.8 5E+02 0.011 24.5 10.5 84 195-288 108-196 (250)
466 PF02603 Hpr_kinase_N: HPr Ser 28.7 57 0.0012 27.2 2.9 48 227-282 64-111 (127)
467 COG1936 Predicted nucleotide k 28.3 74 0.0016 28.2 3.6 71 264-334 26-97 (180)
468 COG0439 AccC Biotin carboxylas 28.1 2.4E+02 0.0051 29.3 7.7 31 259-289 135-165 (449)
469 PRK05402 glycogen branching en 27.6 42 0.00091 37.2 2.5 32 255-286 307-338 (726)
470 PRK08057 cobalt-precorrin-6x r 27.5 56 0.0012 30.9 2.9 29 259-287 48-76 (248)
471 PRK12313 glycogen branching en 27.5 44 0.00094 36.5 2.5 32 255-286 212-243 (633)
472 PF05913 DUF871: Bacterial pro 27.4 77 0.0017 31.7 4.0 57 229-285 12-69 (357)
473 PRK05872 short chain dehydroge 27.3 4.9E+02 0.011 24.8 9.8 59 199-263 44-102 (296)
474 KOG1394 3-oxoacyl-(acyl-carrie 27.3 5.5E+02 0.012 25.7 9.5 88 189-278 260-352 (440)
475 KOG1201 Hydroxysteroid 17-beta 27.2 5.9E+02 0.013 24.8 9.7 84 156-257 41-125 (300)
476 PLN03244 alpha-amylase; Provis 27.2 45 0.00098 36.8 2.5 34 254-287 432-465 (872)
477 TIGR01305 GMP_reduct_1 guanosi 27.1 2.2E+02 0.0049 28.1 7.0 21 263-283 199-219 (343)
478 PF01972 SDH_sah: Serine dehyd 26.9 5.6E+02 0.012 24.6 9.3 78 227-317 71-152 (285)
479 PF14488 DUF4434: Domain of un 26.8 2.6E+02 0.0057 24.5 6.9 56 227-282 16-84 (166)
480 TIGR01515 branching_enzym alph 26.6 45 0.00098 36.2 2.4 32 255-286 198-229 (613)
481 smart00852 MoCF_biosynth Proba 26.6 3.1E+02 0.0067 22.8 7.2 61 197-269 19-79 (135)
482 COG1748 LYS9 Saccharopine dehy 26.5 3.4E+02 0.0075 27.5 8.4 66 156-240 4-69 (389)
483 cd00953 KDG_aldolase KDG (2-ke 26.5 1.1E+02 0.0025 29.3 5.0 56 217-275 9-64 (279)
484 PF03599 CdhD: CO dehydrogenas 26.4 1.2E+02 0.0026 30.6 5.1 45 229-283 107-151 (386)
485 PRK05096 guanosine 5'-monophos 26.3 6.5E+02 0.014 25.0 10.8 57 227-283 159-220 (346)
486 PF01301 Glyco_hydro_35: Glyco 26.1 1.2E+02 0.0026 29.9 5.1 20 263-282 63-82 (319)
487 PF02571 CbiJ: Precorrin-6x re 25.7 61 0.0013 30.6 2.9 28 259-286 49-76 (249)
488 PLN00196 alpha-amylase; Provis 25.5 46 0.001 34.2 2.2 29 257-285 86-114 (428)
489 PF06415 iPGM_N: BPG-independe 24.9 93 0.002 28.8 3.8 47 231-277 14-60 (223)
490 TIGR00290 MJ0570_dom MJ0570-re 24.7 5.6E+02 0.012 23.7 9.7 98 157-279 5-114 (223)
491 PRK04452 acetyl-CoA decarbonyl 24.1 3.4E+02 0.0074 26.7 7.7 46 227-282 136-181 (319)
492 COG1606 ATP-utilizing enzymes 24.0 1.3E+02 0.0029 28.3 4.6 97 157-287 22-124 (269)
493 PLN02831 Bifunctional GTP cycl 24.0 1.8E+02 0.0039 30.1 6.0 50 232-282 177-226 (450)
494 PRK10785 maltodextrin glucosid 23.8 50 0.0011 35.7 2.1 29 258-286 221-249 (598)
495 PF05368 NmrA: NmrA-like famil 23.8 1.9E+02 0.0042 26.5 5.9 76 188-281 24-99 (233)
496 PF02638 DUF187: Glycosyl hydr 23.7 2.1E+02 0.0044 28.1 6.2 20 262-281 69-88 (311)
497 TIGR00289 conserved hypothetic 23.4 6E+02 0.013 23.5 10.6 98 157-279 5-114 (222)
498 PRK03910 D-cysteine desulfhydr 23.2 5E+02 0.011 25.5 9.0 55 157-221 67-129 (331)
499 PRK14045 1-aminocyclopropane-1 23.0 5.8E+02 0.013 25.0 9.4 55 157-221 73-128 (329)
500 PF05670 DUF814: Domain of unk 22.9 51 0.0011 25.5 1.5 24 266-289 20-44 (90)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=3.6e-96 Score=753.66 Aligned_cols=485 Identities=53% Similarity=1.004 Sum_probs=453.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCC
Q 010842 14 FKPLDAQEFRKQAHQMVDFIADYYQNIES----YPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLS 89 (499)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~ 89 (499)
+.+|+.++||+++++++|.+.+|++++.+ +||.+.++|++++..++.++|++|++++++++++.+.+.|+.++|+|
T Consensus 51 ~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~h 130 (539)
T PLN02590 51 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQS 130 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCC
Confidence 56699999999999999999999999886 79999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT 169 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a 169 (499)
|+|+||+|++++++++++|++++++|++...|..+|+++++|+++++||++++|+|+.++.++.++|+||+|||+||++|
T Consensus 131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876544456899999999999999
Q ss_pred HHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE
Q 010842 170 LIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF 249 (499)
Q Consensus 170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~ 249 (499)
|.+||++..+..+..+.++.+||+|+++|+|+.|+++++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++
T Consensus 211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~ 290 (539)
T PLN02590 211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 290 (539)
T ss_pred HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence 99999987766555667889999999999999999999999999999999986556899999999999999999999999
Q ss_pred EEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC
Q 010842 250 LCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ 329 (499)
Q Consensus 250 vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~ 329 (499)
||+|+|||.+|++|||++|+++|++||+||||||||||+++++|++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus 291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~ 370 (539)
T PLN02590 291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD 370 (539)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
+..+.+++...+.|+.......+...++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.|+|
T Consensus 371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f 450 (539)
T PLN02590 371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF 450 (539)
T ss_pred HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 98888899999999976433333467899999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+++.+|.+++||||+.+.. .++++.+.+|++|.++|+++|.++++++.++|+.+||+|++||.|+++||+.+++.|.+.
T Consensus 451 el~~~~~l~iVcFr~~~~~-~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 451 EVVTTRYFSLVCFRLAPVD-GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred EEecCCceEEEEEEecCCC-CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999998743 233456889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCC
Q 010842 490 ADRLFKGSAF 499 (499)
Q Consensus 490 ~~~l~~~~~~ 499 (499)
+.++.+..-|
T Consensus 530 a~~~~~~~~~ 539 (539)
T PLN02590 530 ASKFTRNDHY 539 (539)
T ss_pred HHHhcccCCC
Confidence 9998776544
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=1.4e-90 Score=713.73 Aligned_cols=481 Identities=58% Similarity=1.067 Sum_probs=449.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccccc
Q 010842 16 PLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAF 95 (499)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~ 95 (499)
.||.++||+.++++++.+.+|+++.+++||.+..+|+++++.++..+|++|.+.+++++++.+.+.|+.++|+||+|+||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~ 88 (490)
T PLN02880 9 PMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAY 88 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEe
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHH
Q 010842 96 FPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175 (499)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~ 175 (499)
+|++++++++++|++++.+|+++..|..+|..+++|+++++|+++++|+|+.++.++.++|++|+|||+||++||++||+
T Consensus 89 ~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~ 168 (490)
T PLN02880 89 YPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARD 168 (490)
T ss_pred ccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876544557899999999999999999999
Q ss_pred HHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC
Q 010842 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG 255 (499)
Q Consensus 176 ~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g 255 (499)
+..+..+..+.++.+||+|+.+|+|+.|+++++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++||+|+|
T Consensus 169 ~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataG 248 (490)
T PLN02880 169 RVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVG 248 (490)
T ss_pred HHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecC
Confidence 88766555566788999999999999999999999999999999987556899999999999999999999999999999
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHH
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVK 335 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~ 335 (499)
||.+|++|||++|+++|++||+|+|||||||+++++++++++.+.|+++|||+++|+|||+++|++||++++|++..+.+
T Consensus 249 TT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~ 328 (490)
T PLN02880 249 TTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQ 328 (490)
T ss_pred CCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887778
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.+...++|+...........++.++++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+++++.+|
T Consensus 329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~ 408 (490)
T PLN02880 329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR 408 (490)
T ss_pred HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 88899999977543333457888999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+++|||++.+.. .+++..+.+|+++.++|.++|.++++.+.++|+.++|+|+.||.+|++||+.+++.|.++++++..
T Consensus 409 ~~~iv~Fr~~~~~-~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 409 IFSLVCFRLVPPK-NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred ceEEEEEEEeCCC-CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998743 234456889999999999999999999999999999999999999999999999999999999877
Q ss_pred cC
Q 010842 496 GS 497 (499)
Q Consensus 496 ~~ 497 (499)
++
T Consensus 488 ~~ 489 (490)
T PLN02880 488 KS 489 (490)
T ss_pred hc
Confidence 65
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-86 Score=631.68 Aligned_cols=464 Identities=52% Similarity=0.936 Sum_probs=442.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842 17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF 96 (499)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 96 (499)
|+.++||+.+++++|.+++|+++++++||.|.++|++++..+|.+.|+.++++++|++++.+.++|+.+||+||+|++|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842 97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
|++.++|++++|+++..++.-++.|..+|+.++||..+++||++++++|..|.. .|.|||++.+++|++++.++++||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 448899999999999999999999
Q ss_pred HHHHhHhhhh--------ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842 175 DRALDAVGAE--------NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 175 ~~~~~~~~~~--------g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 246 (499)
..+..+.++. -..+.++|+|+++|.|++|+|.+.|+ .++.+|+|. +|.|+.+.|+++|++|.++|.+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI 235 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI 235 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence 9888776533 13588999999999999999999999 999999986 6899999999999999999999
Q ss_pred cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
||+|++|.|||.++++|+|++|..+|+++|+|||||+||+|.++.||+++.++.|++.|||+.+++|||+.+..+|+.+|
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
+||...+..++..+|-||.+..+. ...||+.|++..||||+++++|+.++.+|.+++++.++++.++++.+.+.+.+.
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~~--~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d 393 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQG--SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD 393 (511)
T ss_pred eecCceeeeeeecChHhhcchhhc--cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999988888999999999987654 378999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
+.||++++..++.||||..+. |..|++|+++++.+|.+++.++.+.|+.+||++++.+.++++||++.++.|
T Consensus 394 ~~FE~~~~~~lgLvcFRlk~~--------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I 465 (511)
T KOG0628|consen 394 PRFEIVNKRILGLVCFRLKGD--------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKII 465 (511)
T ss_pred CcceeecccccceeEEeecCC--------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHH
Confidence 999999999999999999874 788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 010842 487 MEGADRLFK 495 (499)
Q Consensus 487 ~~~~~~l~~ 495 (499)
.+.+..+..
T Consensus 466 ~~~a~~l~~ 474 (511)
T KOG0628|consen 466 FEAADELFE 474 (511)
T ss_pred HHHHHHHHh
Confidence 999888543
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=2.1e-74 Score=594.10 Aligned_cols=453 Identities=22% Similarity=0.333 Sum_probs=387.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCC
Q 010842 20 QEFRKQAHQMVDFIADYYQN--IESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFP 97 (499)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~ 97 (499)
..+..+.+++.+.+++|+.+ ....|+.+...+.. ....+|++|.+.+++++++.+.+.+++++|+||+|+||++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~ 97 (522)
T TIGR03799 22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDF----SSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT 97 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhcc----cccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence 56777888888888888777 33345544433322 2457899999999999999999999999999999999999
Q ss_pred CC-CChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC-CCccc-----cCCCccEEEcCChHHHHHHHH
Q 010842 98 AT-VSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL-PKTFM-----FSGTGGGVIQNTTSDSILVTL 170 (499)
Q Consensus 98 ~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~-~~~~~-----~~~~~~g~~t~ggt~A~~~al 170 (499)
++ +.....+++ +.+++|+|...|+.||+++++|+++++||+++++. ++.++ ....++|++|+|||+||++||
T Consensus 98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al 176 (522)
T TIGR03799 98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL 176 (522)
T ss_pred CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence 96 344445777 67789999999999999999999999999999963 22211 112357999999999999999
Q ss_pred HHHHHHHHhHhh------hh---------ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842 171 IAARDRALDAVG------AE---------NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235 (499)
Q Consensus 171 ~~ar~~~~~~~~------~~---------g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~ 235 (499)
++||++..+..+ .+ +.++.+||+|+.+|+|+.|+++++|+|.++++.||+|++ ++||+++|++
T Consensus 177 ~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~ 254 (522)
T TIGR03799 177 WVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDALRD 254 (522)
T ss_pred HHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHHHH
Confidence 999998764321 12 235789999999999999999999999989999999875 4999999999
Q ss_pred HHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccc
Q 010842 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW 315 (499)
Q Consensus 236 ~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~ 315 (499)
+|+++.+++.+|++|++++|||.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|||
T Consensus 255 ~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~ 334 (522)
T TIGR03799 255 KCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQ 334 (522)
T ss_pred HHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhc
Confidence 99999888999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842 316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL 395 (499)
Q Consensus 316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~ 395 (499)
+++|++||++++|++..+ +.+...+.|+.... ..++.++++++||++.++++|++++.+|.+|+++++++.+++
T Consensus 335 l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~l 408 (522)
T TIGR03799 335 LYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEK 408 (522)
T ss_pred CCcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999998654 66777889985432 235678899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCC-------------cchhHHHHHHHHHHHHhcCCEEEEeeeEC--
Q 010842 396 AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSG-------------SADTEMLNRKLLDWVNSTGRVYLTHTIVG-- 460 (499)
Q Consensus 396 a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~-------------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-- 460 (499)
+++|.+.|++.|+|+++.+|.+++||||+.|..... .+..+.+|+++.++++++|.++++.+.++
T Consensus 409 a~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~ 488 (522)
T TIGR03799 409 AKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPA 488 (522)
T ss_pred HHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeccc
Confidence 999999999999999999999999999997743110 13357889999999999999999988775
Q ss_pred -----CEEEEEEeccCCCCcHHHHHHHHHH
Q 010842 461 -----GLYMLRFAVGASLTDERHVVAAWEL 485 (499)
Q Consensus 461 -----g~~~lRi~~~~~~~t~~di~~l~~~ 485 (499)
+..+||++++||.||++||+.+++.
T Consensus 489 ~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 489 QYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred ccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 3478999999999999999998864
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=9.7e-75 Score=577.75 Aligned_cols=370 Identities=41% Similarity=0.751 Sum_probs=333.3
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHH
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTEL 130 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~l 130 (499)
|++|++.++.++|++|.+++++++++.+.+.++..+|+||+|+||+++++++++++++++++.+|+|...|+.+|..+++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHH
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
|+++++|+++++|+|.++...+.++|++|+|||+||++|+++||++..++.+.+| .++++||+|+.+|||+.|+|++
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 9999999999999996643333468999999999999999999999888766666 4689999999999999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
+|+ .++.||++++ ++||+++|+++|+++.++|..|++|++|+|||.+|++|||++|+++|+++++|+||||||||
T Consensus 161 lGl---g~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 161 LGL---GVRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp TTS---EEEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred eee---EEEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 999 5999999975 59999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
+++++|+++++..++++||||++|+|||+++|++||++++|++..+...++..+.|+.....+.+...++.++++++||+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 88889999999999999999999999999999999999999999888888889999997654555667888999999999
Q ss_pred CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEec
Q 010842 368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN 425 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 425 (499)
++++++|++|+.+|.+|+++++++.++++++|++.|++.|+++++.+|.+++||||++
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999984
No 6
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=1.3e-70 Score=569.32 Aligned_cols=468 Identities=18% Similarity=0.240 Sum_probs=391.3
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCc
Q 010842 11 SVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSP 90 (499)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p 90 (499)
-..|+.+|.+.|++++.++++.+.+++++..... .+..+|++++. .++.+...+++++++++.+.+.+++++|+||
T Consensus 8 flgpk~en~~~~~~~~~~~~~~~~~~r~~~~p~d-~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P 83 (608)
T TIGR03811 8 FIGDKAENGQLYKDLLNKLVDEHLGWRQNYMPQD-KPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSA 83 (608)
T ss_pred eecCcccCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCc
Confidence 3578999999999999999999999999853110 13566776665 3455566689999999999999999999999
Q ss_pred -cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842 91 -NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT 169 (499)
Q Consensus 91 -~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a 169 (499)
||+||+++++++|+++++++...+|+|+..|+.||+++.+|+++++|+++++|++.. +|+||+|||+||++|
T Consensus 84 ~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~a 156 (608)
T TIGR03811 84 GRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEG 156 (608)
T ss_pred cceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999874 689999999999999
Q ss_pred HHHHHHHHHh-----Hhh-----------------------------------hh----c--cCC-eEEEcCCCCchhHH
Q 010842 170 LIAARDRALD-----AVG-----------------------------------AE----N--MHK-LVVYGSDQTHSTFA 202 (499)
Q Consensus 170 l~~ar~~~~~-----~~~-----------------------------------~~----g--~~~-~~i~~s~~~H~s~~ 202 (499)
|++||+.+.. ..+ .. | ..+ .++++|..+|||+.
T Consensus 157 L~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~ 236 (608)
T TIGR03811 157 LWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL 236 (608)
T ss_pred HHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHH
Confidence 9999996511 100 00 0 112 27999999999999
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH---HHhCC--
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA---NEYGI-- 277 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia---~~~~~-- 277 (499)
|++.++|+|.++++.||+|++ ++||+++|+++|+++.++|.+|++||+|+|||.+|+||||++|+++| +++|+
T Consensus 237 KAa~ilGlG~~~vv~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~ 314 (608)
T TIGR03811 237 KAADIIGIGLDQVIPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYF 314 (608)
T ss_pred HHHHHcCCCcccEEEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCce
Confidence 999999999999999999864 59999999999999999999999999999999999999999999999 67898
Q ss_pred EEEeeccccchh--ccC------------------------------ccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842 278 WVHVDAAYAGSA--CIC------------------------------PEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL 325 (499)
Q Consensus 278 ~lhvD~A~g~~~--~~~------------------------------~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 325 (499)
|+||||||||++ +++ +++++.+.++++||||++|+|||+++|++||++
T Consensus 315 ~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~l 394 (608)
T TIGR03811 315 YLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGI 394 (608)
T ss_pred eEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEE
Confidence 699999999975 222 355677889999999999999999999999999
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
++|++. +.+.++..++|+.....+ .......++++++|+ ++++++|++++.+ |.+|+++++++++++|+++.+.
T Consensus 395 l~Rd~~-~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~ 471 (608)
T TIGR03811 395 VIQDIR-MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDF 471 (608)
T ss_pred EEeCHH-HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999996 567888999999764321 112456778888886 4699999999998 9999999999999999999999
Q ss_pred Hhc------CCCeEE--EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcC-----CEEEEeeeEC--------
Q 010842 403 VKS------DPRFEI--VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STG-----RVYLTHTIVG-------- 460 (499)
Q Consensus 403 L~~------~~~~~~--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g-----~~~~~~~~~~-------- 460 (499)
|++ .|.+++ +.+|++++|||++.+.+..+-+..|++|+++.+++. ..| .++++.|.+.
T Consensus 472 L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~ 551 (608)
T TIGR03811 472 LNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSP 551 (608)
T ss_pred HHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhH
Confidence 988 467777 778999999999987652122567899999999876 222 2344444331
Q ss_pred ------------------CEEEEEEeccCCCCcH-HHHHHHHHHHHHHHHHHh
Q 010842 461 ------------------GLYMLRFAVGASLTDE-RHVVAAWELIMEGADRLF 494 (499)
Q Consensus 461 ------------------g~~~lRi~~~~~~~t~-~di~~l~~~l~~~~~~l~ 494 (499)
...+||.++|+|..++ +.++.+++.|+++..+-+
T Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~ 604 (608)
T TIGR03811 552 FAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKL 604 (608)
T ss_pred HHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHH
Confidence 2378999999998876 568888888888776544
No 7
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-72 Score=530.63 Aligned_cols=465 Identities=22% Similarity=0.363 Sum_probs=422.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842 19 AQEFRKQAHQMVDFIADYYQNIE--SYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF 96 (499)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 96 (499)
.+..+.++.++++.+.+|...-- +..|.....|.+|+..+..++|+++.+.++|+.+.++.+.. ++...||||++.+
T Consensus 30 ~~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y-~vKTgHprffNQl 108 (510)
T KOG0629|consen 30 EEVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKY-SVKTGHPRFFNQL 108 (510)
T ss_pred chhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHh-hhccCCCcchhhh
Confidence 34457888999999999955443 34788889999999999999999999999999999987755 4566899999999
Q ss_pred CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842 97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDR 176 (499)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~ 176 (499)
.++..+.+..++++++..|.|.+.|+..|+...+|.++...+.++.|++.. ++|+|++||+-+|++|+.+||.+
T Consensus 109 ~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk 182 (510)
T KOG0629|consen 109 SSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYK 182 (510)
T ss_pred ccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999875 47899999999999999999999
Q ss_pred HHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842 177 ALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253 (499)
Q Consensus 177 ~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t 253 (499)
..++.+..| +|+.++++|+.+|||+.|+++.+|+|+++++.|++++.| .|++++||+.|.++.++|..||+|.+|
T Consensus 183 ~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaT 260 (510)
T KOG0629|consen 183 NFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNAT 260 (510)
T ss_pred cCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEec
Confidence 888766554 589999999999999999999999999999999999876 999999999999999999999999999
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+|||..|++|||+.|+++|++|++|+||||||||+.+++..+|+++.|+++|||++++|||++++|..|+.+++|....+
T Consensus 261 aGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll 340 (510)
T KOG0629|consen 261 AGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLL 340 (510)
T ss_pred CCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+..+..+.||+++...+...+|.++..+||||+.+.+++|..|++-|..|+++.++++.++|+||.++|++.++++++.
T Consensus 341 ~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~ 420 (510)
T KOG0629|consen 341 QRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLF 420 (510)
T ss_pred HhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehh
Confidence 88889999999999888888889999999999999999999999999999999999999999999999999999988775
Q ss_pred C--CCceEEEEEecCCCCCC-------cchhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEeccCCCCcHHHHHHHH
Q 010842 414 P--RHFALVCFRLNPYPHSG-------SADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 414 ~--~~~~~v~f~~~~~~~~~-------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~~~~~t~~di~~l~ 483 (499)
. |+...|||++.|..... ......+.-.+.+++.++|..++++.+...+ .++|+.+.|+..+.+|+|.++
T Consensus 421 ~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dfll 500 (510)
T KOG0629|consen 421 ELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLL 500 (510)
T ss_pred cCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHH
Confidence 3 78888999998764211 1223344557788999999988888776554 689999999999999999999
Q ss_pred HHHHHHHHH
Q 010842 484 ELIMEGADR 492 (499)
Q Consensus 484 ~~l~~~~~~ 492 (499)
+.|..+.+.
T Consensus 501 dEIerlgq~ 509 (510)
T KOG0629|consen 501 DEIERLGQD 509 (510)
T ss_pred HHHHHhccC
Confidence 999887654
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-59 Score=476.49 Aligned_cols=438 Identities=25% Similarity=0.314 Sum_probs=358.0
Q ss_pred HHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcC-CCCCCCCccccccCCCCCChHHHHHHHHH
Q 010842 33 IADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIP-GITHWLSPNFFAFFPATVSTAGFLGEMLC 111 (499)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 111 (499)
+.++....+.++..+...|.+-.......+|+.+.+.++++.++...... ....+.||+++.|..+++.++..+.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~ 83 (460)
T COG0076 4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV 83 (460)
T ss_pred HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence 44444444444444455555555555678899999999999999988444 44445699999999999999999999999
Q ss_pred HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh-c--cCC
Q 010842 112 ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE-N--MHK 188 (499)
Q Consensus 112 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~-g--~~~ 188 (499)
..+|+|...|..+|+++++|+++++|+++++|++.. +.|+||+|||+||++|++++|++..+..+.. + ...
T Consensus 84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~------~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~ 157 (460)
T COG0076 84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEE------ASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGK 157 (460)
T ss_pred HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC------CceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCC
Confidence 999999999999999999999999999999999865 3689999999999999999999987544322 1 124
Q ss_pred eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHH
Q 010842 189 LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL 268 (499)
Q Consensus 189 ~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I 268 (499)
++|++|..+|+|+.|+++++|+ .++.||+++. +++||+++|+++|++++..| +||+++|||++|.+|||++|
T Consensus 158 P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~i 229 (460)
T COG0076 158 PNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEEL 229 (460)
T ss_pred CeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHH
Confidence 5899999999999999999999 6777777653 47999999999999998765 69999999999999999999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
++||+++++|+||||||||+.+.+.+.+.. ..+++++|||++|+|||+++|++||++++||++.+.+.+.....|+...
T Consensus 230 a~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~ 309 (460)
T COG0076 230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG 309 (460)
T ss_pred HHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC
Confidence 999999999999999999999877777666 6899999999999999999999999999999987878888888887753
Q ss_pred CCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842 348 PSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 426 (499)
...++++.++|.. .++++|+.++.+|.+||+++++++.++++++++.|++.+.|+++++|.+++|||++++
T Consensus 310 --------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 310 --------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred --------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 2345577788877 6899999999999999999999999999999999999988999999999999999955
Q ss_pred CCC--C-CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 427 YPH--S-GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 427 ~~~--~-~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
... . .....+..+..+..+...+|..++..+.+.++..+++.+.++.++.++ +.+...+.....++
T Consensus 382 ~~~~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 450 (460)
T COG0076 382 DEDTLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREI 450 (460)
T ss_pred cccchhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhh
Confidence 320 0 001112223334444555565566666777788888888877777777 66666666544443
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=4.8e-58 Score=459.55 Aligned_cols=360 Identities=18% Similarity=0.253 Sum_probs=307.3
Q ss_pred HHHHHHHHHhhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHHHcccCCcccccCh---hhHHHHHHHHHHHHHHcCC
Q 010842 69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVST-AGFLGEMLCACFNSVGFNWLASP---ASTELEIVVMDWLATMLKL 144 (499)
Q Consensus 69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~ 144 (499)
++++++++.+.+.++..+ |+|| |.+.++ ++.+++++...+|+-+..|..+| .+.++|+++++|+++++|+
T Consensus 75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence 588999999999887654 9999 888888 89999999999998888999998 7999999999999999999
Q ss_pred CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
+++. .+|++|+||||||++||++||+.. ++.++|+|+.+|+|+.|+++++|+ +++.||++++
T Consensus 149 p~~~-----~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~~- 210 (470)
T PLN02263 149 EKNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLVS- 210 (470)
T ss_pred CCCC-----CeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCCC-
Confidence 8631 268999999999999999999864 456899999999999999999999 9999999864
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC-----EEEeeccccchhccCccchhhh
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI-----WVHVDAAYAGSACICPEFRHYL 299 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~-----~lhvD~A~g~~~~~~~~~~~~~ 299 (499)
++||+++|+++|.+++ .+|++|++|+|||++|++|||++|+++|+++|+ |+||||||||+++++.+..+.+
T Consensus 211 -g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~ 286 (470)
T PLN02263 211 -GEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKV 286 (470)
T ss_pred -CcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccccc
Confidence 5999999999997754 479999999999999999999999999999997 9999999999877443333445
Q ss_pred cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHH
Q 010842 300 NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLR 378 (499)
Q Consensus 300 ~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~ 378 (499)
.+.+.+|||++|+|||+++|++||++++|++. ...+...+.|+.... .++.+||++. ++++|++|+
T Consensus 287 df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~d-----------~ti~gSR~g~~al~lW~~L~ 353 (470)
T PLN02263 287 TFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASRD-----------ATIMGSRNGHAPIFLWYTLN 353 (470)
T ss_pred CCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCCC-----------CCcCCCCCcHHHHHHHHHHH
Confidence 56667999999999999999999999999753 367788899997642 3688999984 899999999
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee
Q 010842 379 SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI 458 (499)
Q Consensus 379 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 458 (499)
.+|.+|++++++++.++|+++.+.|++. +++++.+|..++|+|+.... . ...+|+. ++.
T Consensus 354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~-------------~----~~~~gW~-L~~-- 412 (470)
T PLN02263 354 RKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD-------------E----EFVRRWQ-LAC-- 412 (470)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch-------------H----HhhcceE-Ecc--
Confidence 9999999999999999999999999998 78777788899999975321 0 1224642 222
Q ss_pred ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
. ...++++++ +..+++.||++++.|++..+..
T Consensus 413 ~--~~~~Hivvm-phv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 413 Q--GNIAHVVVM-PSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred C--CCcEEEEEc-CCCCHHHHHHHHHHHHHHHhhh
Confidence 1 135999997 8889999999999999887654
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=3.5e-57 Score=457.75 Aligned_cols=398 Identities=18% Similarity=0.225 Sum_probs=333.4
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHH
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLA 139 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la 139 (499)
.++|++|.+.+++++++.+.+.. .+..||+|++|+.+++.+. +.+++..++|+|...|..+|..+++|+++++|++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 58999999999999999987643 3456899999998766554 5888888898887788888988899999999999
Q ss_pred HHcCCC-C--ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc--cCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842 140 TMLKLP-K--TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--MHKLVVYGSDQTHSTFAKVCKLAGVSPAN 214 (499)
Q Consensus 140 ~l~g~~-~--~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g--~~~~~i~~s~~~H~s~~ka~~~~G~g~~~ 214 (499)
+++|++ . + .+|++|+||||||++|+.++|++...+.+.+| ..+.+||+|+.+|+|+.|+++.+|+ +
T Consensus 91 ~llg~~~~~~~------~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~ 161 (431)
T TIGR01788 91 DLWHAPAKDAE------AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---E 161 (431)
T ss_pred HHhCCCCCCCC------CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---e
Confidence 999998 2 3 25788999999999999999865433211222 2356899999999999999999999 9
Q ss_pred eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------CCEEEeeccccch
Q 010842 215 IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------GIWVHVDAAYAGS 288 (499)
Q Consensus 215 v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------~~~lhvD~A~g~~ 288 (499)
++.||++++ ++++|+++|+++|+++ +++|+++++||.+|++||+++|+++|+++ |+|+||||||||+
T Consensus 162 v~~i~~d~~-~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 162 LREVPMDPG-RYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred eEEEecCCC-ceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 999999873 3689999999999875 45899999999999999999999999999 9999999999988
Q ss_pred hcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 289 ACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 289 ~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
.+. .++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...+.|+.... .+++++++|
T Consensus 235 ~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~---------~~~t~~~sR 304 (431)
T TIGR01788 235 IAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE---------PTFTLNFSR 304 (431)
T ss_pred HHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC---------CCcceecCc
Confidence 753 344443333 67899999999999999999999999998656566777788886421 235788999
Q ss_pred CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 367 RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 367 ~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
++ +++++|+.++.+|.+|++++++++++++++|.+.|++.|+|+++.+ +.+++|||++.+.. + .+..+.++.+
T Consensus 305 ~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~---~--~~~~~~~l~~ 379 (431)
T TIGR01788 305 PANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA---D--PGYTLYDLSH 379 (431)
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC---C--CCcCHHHHHH
Confidence 97 7899999999999999999999999999999999999999999987 79999999997632 0 1122677889
Q ss_pred HHHhcCCEE---EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVY---LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 445 ~l~~~g~~~---~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+|.++|+++ .+++.+++..++|++++ +.++++.++.+++.|+++...+
T Consensus 380 ~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 380 RLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 999999864 45566889999999995 8899999999999999988765
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=4.1e-50 Score=397.90 Aligned_cols=356 Identities=21% Similarity=0.278 Sum_probs=284.6
Q ss_pred HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc---cChhhHHHHHHHHHHHHHHcCCC
Q 010842 69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL---ASPASTELEIVVMDWLATMLKLP 145 (499)
Q Consensus 69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~---~~p~~~~lE~~~~~~la~l~g~~ 145 (499)
..++++.+.+.+.. .+..|+||......-++.+..++....|..+..+. .+..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 45677777666543 46679999876655556677776655443333333 33478999999999999999997
Q ss_pred CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC
Q 010842 146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN 225 (499)
Q Consensus 146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~ 225 (499)
++. .+|+||+||||||++|++++|+.. ++.+|++|..+|+|+.|+++++|+ .++.||+++++
T Consensus 83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~g- 144 (374)
T PLN03032 83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLPSG- 144 (374)
T ss_pred Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCCC-
Confidence 542 258999999999999999998752 345799999999999999999999 78999998765
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-----CEEEeeccccchhccCccchhhhc
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-----IWVHVDAAYAGSACICPEFRHYLN 300 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-----~~lhvD~A~g~~~~~~~~~~~~~~ 300 (499)
+||+++|+++|++++ ..|++|++++|||++|++||+++|+++|+++| +|+|||||+|++.+......+.+.
T Consensus 145 -~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~ 220 (374)
T PLN03032 145 -EIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT 220 (374)
T ss_pred -cCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence 999999999998653 36889999999999999999999999999996 599999999998765422222233
Q ss_pred CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHH
Q 010842 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRS 379 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~ 379 (499)
....+||+++|+|||+++|+|||++++|++. .+.+...++|+... ++++++||+ ++++++|++|+.
T Consensus 221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~ 287 (374)
T PLN03032 221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRR 287 (374)
T ss_pred CCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHH
Confidence 3346999999999999999999999999853 25677788998653 358899997 478999999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842 380 YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV 459 (499)
Q Consensus 380 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 459 (499)
+|.+|++++++++.++++++.+.|++. +++++..|..++|+|+.+.. ..+. +|+. ++. .
T Consensus 288 ~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~------------~~~~-----~~w~-l~~--~ 346 (374)
T PLN03032 288 KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD------------EAFI-----KKWQ-LAC--E 346 (374)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc------------HhHh-----heee-ecc--c
Confidence 999999999999999999999999986 88888888899999976532 1111 2432 222 1
Q ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 460 GGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
. ..+|+++| +.++++.||++++.|++
T Consensus 347 ~--~~~hi~vm-~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 347 G--DIAHVVVM-PNVTVEKLDEFVEELVE 372 (374)
T ss_pred C--CEEEEEEC-CCCCHHHHHHHHHHHhc
Confidence 1 37999998 88999999999999876
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.4e-48 Score=390.25 Aligned_cols=356 Identities=19% Similarity=0.270 Sum_probs=286.9
Q ss_pred HHHHHHHHhhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHHHcccCCcccccCh----hhHHHHHHHHHHHHHHcCC
Q 010842 70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVST-AGFLGEMLCACFNSVGFNWLASP----ASTELEIVVMDWLATMLKL 144 (499)
Q Consensus 70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p----~~~~lE~~~~~~la~l~g~ 144 (499)
.+.++.+...+ .+||+|+.++|..... ++.+.+++....|+.+ .+...+ .+.++|+++++|+++++|+
T Consensus 8 ~~~~~~~~~~~------~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~~~~g~~~~~~e~~~~~~~a~l~g~ 80 (380)
T PRK02769 8 QKEIEDFWLYL------RHNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKI 80 (380)
T ss_pred HHHHHHHHHHH------HHhhhcccCCCchhhcCHHHHHHHHHhhhccCC-CccccCCCCCChHHHHHHHHHHHHHHhCC
Confidence 45566665544 2588888887777766 6888898888776533 333334 4789999999999999999
Q ss_pred CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
++.. .+|+||+||||||++|++++|+.. ++.+|++|+.+|+|+.|+++.+|+ ..+.||++++
T Consensus 81 ~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~- 142 (380)
T PRK02769 81 PFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLPN- 142 (380)
T ss_pred CCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCCC-
Confidence 7542 258999999999999999998753 456899999999999999999999 7888998764
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC---CEEEeeccccchhccCccchhhhcC
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG---IWVHVDAAYAGSACICPEFRHYLNG 301 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~---~~lhvD~A~g~~~~~~~~~~~~~~g 301 (499)
++||+++|+++|+++ +.+|++|++++|||.+|++||+++|+++|++|| +|+|||||||++.+.+.+....+..
T Consensus 143 -g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~ 218 (380)
T PRK02769 143 -GEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF 218 (380)
T ss_pred -CcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc
Confidence 599999999999875 567889999999999999999999999999998 6999999999987654433333443
Q ss_pred CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHh
Q 010842 302 IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSY 380 (499)
Q Consensus 302 ~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~ 380 (499)
.+++||+++|+|||+++|+|||++++|++. + ..+...+.|+... +.++.+||+. +++++|++|+.+
T Consensus 219 ~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~-~~~~~~~~yl~~~-----------d~t~~GSR~g~~~l~lw~aL~~l 285 (380)
T PRK02769 219 ADGIDSIAISGHKFIGSPMPCGIVLAKKKY-V-ERISVDVDYIGSR-----------DQTISGSRNGHTALLLWAAIRSL 285 (380)
T ss_pred cCCCCEEEECCcccCCCCCCcEEEEEehhh-h-hhcccCccccCCC-----------CCCccCCCCcHHHHHHHHHHHHH
Confidence 347999999999999999999999999753 3 3344556776532 3467899974 689999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842 381 GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG 460 (499)
Q Consensus 381 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 460 (499)
|.+|++++++++.++++++.+.|++. +++++.+|.+++|+|+.+.. .+. +|+. +... .
T Consensus 286 g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~-------------~~~-----~~w~-l~~~--~ 343 (380)
T PRK02769 286 GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE-------------RIW-----KKWH-LATS--G 343 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH-------------HHH-----hCee-Eccc--C
Confidence 99999999999999999999999885 89999999999999975431 121 3432 2322 1
Q ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 461 GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++|+++| +.+|++.||.+++.|.+....
T Consensus 344 --~~~hi~~~-~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 344 --NQAHIITM-PHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred --CEEEEEEC-CCCCHHHHHHHHHHHHHHHhc
Confidence 37999998 999999999999999887653
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=2.4e-44 Score=360.51 Aligned_cols=340 Identities=39% Similarity=0.638 Sum_probs=290.0
Q ss_pred ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTL 170 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al 170 (499)
|++++++++.+++.++++++..+|++...|..+|...++|+++++|+++++|++ .. ..+++|+|||+||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al 74 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL 74 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence 788999999999999999999999998889999999999999999999999997 32 25799999999999999
Q ss_pred HHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842 171 IAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP 247 (499)
Q Consensus 171 ~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 247 (499)
.+++.+..++.+..+ .++.+|+++..+|+++.+++..+|. +++.||+++++ .+|+++|++++.++.+++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~~--~~d~~~l~~~i~~~~~~~~~~ 149 (345)
T cd06450 75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDEDG--RMDPEALEAAIDEDKAEGLNP 149 (345)
T ss_pred HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCCC--CcCHHHHHHHHHHHHHCCCCc
Confidence 999875433221111 1356899999999999999999999 99999998654 999999999999877777778
Q ss_pred EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842 248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV 327 (499)
Q Consensus 248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~ 327 (499)
.+|++++++|++|.++|+++|+++|+++|+|+|+|+||+.+....+.......+++.+|++++++|||+++|+++|++++
T Consensus 150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~ 229 (345)
T cd06450 150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV 229 (345)
T ss_pred EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence 88999999999999999999999999999999999999988765544443334556799999999999999999999865
Q ss_pred eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842 328 KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 328 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 407 (499)
+ ++++|++++.++.+++++++++..++++++.+.|++++
T Consensus 230 ~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 268 (345)
T cd06450 230 R-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP 268 (345)
T ss_pred H-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4 57889999999999999999999999999999999999
Q ss_pred CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+++++.++..++++|++.+.. +.+..+.++.++|.++|.+++.+..+.+..++|++++++.+|++||++++++|+
T Consensus 269 ~~~~~~~~~~~iv~f~~~~~~-----~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~ 343 (345)
T cd06450 269 GFELLGEPNLSLVCFRLKPSV-----KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIE 343 (345)
T ss_pred CeEEecCCceeEEEEEECCcc-----hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 999888788899999986520 012335678888988887777766666778899999766679999999999987
Q ss_pred H
Q 010842 488 E 488 (499)
Q Consensus 488 ~ 488 (499)
+
T Consensus 344 ~ 344 (345)
T cd06450 344 R 344 (345)
T ss_pred h
Confidence 5
No 14
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=289.22 Aligned_cols=393 Identities=16% Similarity=0.179 Sum_probs=306.5
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHH
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWL 138 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~l 138 (499)
..+|+.|.+-+++++.+.+...-+.. |.-.+-.+-++.. ......++...+|. |...-+..|+...+|+++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~-~~~~~vS~~v~~~---~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~ 129 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGN-PRLGLASGVVYWG---EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMI 129 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCC-cccCeeeEEEecC---CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHH
Confidence 57899999999999999887755544 3333333333222 11223344444444 5566678899999999999999
Q ss_pred HHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe
Q 010842 139 ATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL 218 (499)
Q Consensus 139 a~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v 218 (499)
+.||+.+++ ..|..|+|||+|.+++....+++.... .|+.++.|+++...|.+++|+++++++ .++.|
T Consensus 130 ~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V 197 (491)
T KOG1383|consen 130 ANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELREV 197 (491)
T ss_pred HHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEee
Confidence 999999865 368999999999888888877765442 367788999999999999999999999 99999
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccchhccCccch-
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAGSACICPEFR- 296 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~~~~~~~~~~- 296 (499)
|+++ ++|++|+..+.+.+++++. +||+..|++++|.+||+++|+++.-+ +++++|||+|-||+......+.
T Consensus 198 ~~~~-~~~~~D~~k~~~~i~eNti------~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 198 PLDE-GDYRVDPGKVVRMIDENTI------MLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred eccc-cceEecHHHHHHHhccceE------EEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9997 4799999999999999875 89999999999999999999999988 9999999999999876411111
Q ss_pred -hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHH
Q 010842 297 -HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLW 374 (499)
Q Consensus 297 -~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~ 374 (499)
..-.+..++-|++.|+||++++|.|.|+++.|++..+..-+-..+.|+.+. +...|+.+||+.. ....|
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~va~~w 341 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQVAAQW 341 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHHHHHH
Confidence 122345679999999999999999999999999987766666677777653 3456889999876 46889
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE
Q 010842 375 MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL 454 (499)
Q Consensus 375 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 454 (499)
++|..+|.+||.+..+++.+.++.|++.|++++++.++.+|...++.|.-.... --++.+.|.+.|+.+-
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~----------i~elsd~l~~~GW~ln 411 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVN----------IFELSDLLRKKGWILN 411 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccc----------hhhhhHHHHhcCcCcc
Confidence 999999999999999999999999999999999999999987766665433211 2456677778898654
Q ss_pred EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 455 THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 455 ~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
..+... .+-+|++--.+.++-.++++..|+++.+++...+
T Consensus 412 alq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 412 ALQFPA---AIHICVTRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred ccCCCC---ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 433222 3444443222334447899999999999886654
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=3.3e-35 Score=297.35 Aligned_cols=367 Identities=20% Similarity=0.234 Sum_probs=271.7
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCC
Q 010842 67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPK 146 (499)
Q Consensus 67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~ 146 (499)
.+.+++++.+.+...++... . ||++...+.+. |.++ +.+...+..+.......+....+++++.+++++++|.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 46789999999887776543 3 58887654433 3333 444444433322222235677888999999999999976
Q ss_pred ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCC
Q 010842 147 TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANF 226 (499)
Q Consensus 147 ~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~ 226 (499)
. .+++++|||+||..++.++++... .++..|+++...|+++.++++..|+ +++.||++.+ +
T Consensus 77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~--~ 137 (371)
T PRK13520 77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDDD--Y 137 (371)
T ss_pred C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCCC--C
Confidence 4 368999999999999888865311 1356789999999999999999999 9999998754 4
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCC
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERV 305 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~a 305 (499)
.+|+++|+++|++++ .+|++++++|++|.++|+++|+++|+++|+++|||+||+++...... ..........+
T Consensus 138 ~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 138 RVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 899999999997643 36778889999999999999999999999999999999876532111 10011123458
Q ss_pred ceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHH
Q 010842 306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLN 384 (499)
Q Consensus 306 Dsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g 384 (499)
|++++++|||+..|.++|+++++++..+ +.+....+|+.... .+...+++.. ....+|.++..++.+|
T Consensus 212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g 280 (371)
T PRK13520 212 DSITIDPHKMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREG 280 (371)
T ss_pred ceEEECCccccCccCCceEEEEcCHHHH-HhhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhH
Confidence 9999999999998999999998876544 33333344543321 1122344443 3568899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842 385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM 464 (499)
Q Consensus 385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 464 (499)
++++.++..++++++.+.|++. +++++.++..++++|.+.+ .+++.++|.++|+.+ ... .+..+
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~------------~~~v~~~L~~~gi~v-~~~--~~~~~ 344 (371)
T PRK13520 281 YRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN------------PDEVREKLRERGWRV-SVT--RCPEA 344 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC------------HHHHHHHHHHCCcee-ccC--CCCCE
Confidence 9999999999999999999988 8885556677888887642 356777777778543 322 23457
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 465 LRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 465 lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
+|++++ +.+|++||+++++.|+++.+
T Consensus 345 iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 345 LRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 999985 78999999999999988654
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=4.5e-34 Score=289.23 Aligned_cols=367 Identities=19% Similarity=0.252 Sum_probs=266.8
Q ss_pred CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCc
Q 010842 68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKT 147 (499)
Q Consensus 68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~ 147 (499)
+.+++++++.++ ..+.++.++++++..+...+.++. . +.+..++..+.......|....+++++.+++++++|.++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (373)
T TIGR03812 1 SEEEVLEELKEY-RSEDLKYSDGRILGSMCTNPHPIA-V-KAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA 77 (373)
T ss_pred CHHHHHHHHHHH-HhcCCCCCCCcEEEEEeCCchHHH-H-HHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 457899999984 456667788998888766555442 2 2233333222111122356678889999999999999764
Q ss_pred cccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCc
Q 010842 148 FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFS 227 (499)
Q Consensus 148 ~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~ 227 (499)
.+++++|||++++.++.+++..... +.++..|+++..+|+++.++++..|+ +++.+|++++ +.
T Consensus 78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~~--~~ 140 (373)
T TIGR03812 78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDED--YT 140 (373)
T ss_pred -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCCC--CC
Confidence 3688999999999888776542211 11346788999999999999999999 9999998753 58
Q ss_pred cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccc----hhhhcCCC
Q 010842 228 LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF----RHYLNGIE 303 (499)
Q Consensus 228 ~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~----~~~~~g~~ 303 (499)
+|+++|++++++++ ..++.+.++|++|.++|+++|+++|+++|+|+|||+||+++....... ........
T Consensus 141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 99999999997643 245666689999999999999999999999999999998765321110 01111123
Q ss_pred CCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcH
Q 010842 304 RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGV 382 (499)
Q Consensus 304 ~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~ 382 (499)
.+|++++++|||+..|.++|.+++++++.+ +.+....+|+.... .+...+++.. ....++.+++.++.
T Consensus 215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~ 283 (373)
T TIGR03812 215 GVQSITIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGR 283 (373)
T ss_pred CCCEEEECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCH
Confidence 589999999999998999998887776544 33333344543321 1122345443 35688899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE
Q 010842 383 LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL 462 (499)
Q Consensus 383 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~ 462 (499)
++++++.++..++++++++.|+++ +++.+.++..++++|+..+ ...+.++|.++|+. +... .+.
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~------------~~~v~~~L~~~gi~-v~~~--~~~ 347 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD------------PEEVRKKLRDRGWY-VSVT--RCP 347 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC------------HHHHHHHHHHCCce-eccC--CCC
Confidence 999999999999999999999998 5655546777888887643 23677778778854 3332 234
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 463 YMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 463 ~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.++|++++ +.+|++|+++++++|++
T Consensus 348 ~~iRis~~-~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 348 KALRIVVM-PHVTREHIEEFLEDLKE 372 (373)
T ss_pred CEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence 57999996 77999999999999975
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-34 Score=273.54 Aligned_cols=343 Identities=18% Similarity=0.144 Sum_probs=256.7
Q ss_pred ccccccCCCCCChHHHHHHHHH---HH-cccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLC---AC-FNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~---~~-~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
+-|+.|-...+..|.++..++. .. .|++. .+..+..+..+-++.++.+++++|.++. ..+||+||||+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs 73 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES 73 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence 3477777777777766655543 33 35554 5556766777777789999999999875 47999999999
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
|.+|+..+....... ..+-.|++|...|.++.+.++.+ |+ +|.++|++.+| .+|+++|+++|++++.
T Consensus 74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~~G--~v~~e~L~~al~~~T~ 143 (386)
T COG1104 74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDSNG--LVDLEQLEEALRPDTI 143 (386)
T ss_pred HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCCCC--eEcHHHHHHhcCCCce
Confidence 999998743322110 03457999999999999999999 89 99999999866 9999999999998864
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+|.+.+.+|.+|+++||++|+++|+++|++||||++++.+-+..+-.. + .+|.+++++||+.+ |.|+
T Consensus 144 ------LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-----~-~vD~ls~SaHK~~G-pkGi 210 (386)
T COG1104 144 ------LVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-----L-GVDLLSFSAHKFGG-PKGI 210 (386)
T ss_pred ------EEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-----c-CcceEEeehhhccC-CCce
Confidence 899999999999999999999999999999999999988765543211 1 29999999999866 9999
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH------HHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL------RLWMVLRSYGVLNLQSHIRSDIRLA 396 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al------~~~~~l~~~g~~g~~~~~~~~~~~a 396 (499)
|++++|+.-.+ .+.+.+..+ +.++|.+.. .+-.+++ +..+.++....+...++
T Consensus 211 GaLyv~~~~~~-------~p~i~GGgQ-------------E~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr 269 (386)
T COG1104 211 GALYVRPGVRL-------EPLIHGGGQ-------------ERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLR 269 (386)
T ss_pred EEEEECCCCcc-------CceeccCcC-------------CCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999765332 234444332 345554322 2222222 23567778888899999
Q ss_pred HHHHHHHhcC-CCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------
Q 010842 397 KMFEGFVKSD-PRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV------------- 459 (499)
Q Consensus 397 ~~l~~~L~~~-~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------------- 459 (499)
++|.+.|.+. |++.+...+ -.++++|.+.... .+.+.-.|...|+.+-+++..
T Consensus 270 ~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~----------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~A 339 (386)
T COG1104 270 DRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE----------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRA 339 (386)
T ss_pred HHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc----------HHHHHHhccccCeEEeccccccCCCCCccHHHHH
Confidence 9999999975 888877543 3467778877654 456666677667654332211
Q ss_pred ------CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 460 ------GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 460 ------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
..+..+|+|++ ..+|++||+++++++.++.+++.+
T Consensus 340 mG~~~e~a~~siR~S~g-~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 340 MGISEELAHGSIRFSLG-RFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred cCCChHHhCccEEEEcC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 12378999995 999999999999999999998754
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-33 Score=280.18 Aligned_cols=353 Identities=17% Similarity=0.177 Sum_probs=264.0
Q ss_pred cccccCCCCCChHHHHHHHHHHHc---ccCC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACF---NSVG--FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
.|+.+-.++. .|..+.+.+..++ +.|. ..+..+..+++.+.++++.+++++|.++. ...+||.|+|+|
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~------~eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS------DEIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChhHH
Confidence 4555544433 5667777776654 2332 34555667788899999999999999852 147999999998
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 241 (499)
+.......... .. ++++|+++...|+| |...++..|+ .++++|+++++ .++.+++++.++++|
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~~g--~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDDDG--LLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCCCC--CcCHHHHHHhcCCCc
Confidence 76655544221 11 46889999999987 6677777899 99999998554 999999999888877
Q ss_pred HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842 242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD 321 (499)
Q Consensus 242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 321 (499)
+ +|++++.+|.+|.+.|+++|+++||++|+|++||+|++.+....+- +. -++|.+.+++|||+++|.|
T Consensus 164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-----~~-l~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-----QE-LGCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-----hh-cCCCEEEEcccccccCCCc
Confidence 6 8999999999999999999999999999999999999887665432 11 1499999999999999999
Q ss_pred ceEEEEeCchhHHHhhcCCccCCCCCCC-C-----CCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842 322 CCCLWVKQPGLLVKALSTDPEYLKNKPS-E-----SNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDI 393 (499)
Q Consensus 322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~ 393 (499)
+|++++|++.. . ...++..+... + ....++...+.++.+.+. .++.+-.+++.+...|++++.++..
T Consensus 232 iGvLy~r~~~l--~---~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKELL--E---ELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHHH--h---hcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 99999998542 1 11233322211 0 011122233344444443 3466778888888889999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCE
Q 010842 394 RLAKMFEGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGL 462 (499)
Q Consensus 394 ~~a~~l~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~ 462 (499)
++++++.+.|+++|+++++.++ +..+++|.+.... ...+...|.++|++.-.+... +-.
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~----------~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~ 376 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH----------PHDVATLLDEKGIAVRAGHHCAQPLHRLLGVD 376 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC----------HHHHHHHHHhCCeEEEeccccccHHHHhcCCC
Confidence 9999999999999999999865 6899999998754 577888888889443333221 112
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 463 YMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+|+|+ ++++|++|||+++++|+++.+
T Consensus 377 ~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 377 ATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 3499999 499999999999999998764
No 19
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=6.1e-32 Score=279.97 Aligned_cols=399 Identities=16% Similarity=0.107 Sum_probs=269.2
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCC-CChHHHHHHHHHH-HcccCCccc---ccCh
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPAT-VSTAGFLGEMLCA-CFNSVGFNW---LASP 125 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~-~~n~~~~~~---~~~p 125 (499)
|+.++..-+..+|+ .++.++++++.++...+.... ..|.|.-.+. ..+|.+...++.. .+. +...| ..+.
T Consensus 35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~-~~tpYq~e~~sq 109 (481)
T PRK04366 35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFA-ELHPLQPEETVQ 109 (481)
T ss_pred CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchh-cCCCCCChhhhh
Confidence 55665444456776 899999999999887776432 2677766333 4444444444443 132 33455 3567
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka 204 (499)
+..++..++.+|+++++|++.. .+..++|+.+.++++.+++.....+ |. ++..|+++...|.++...
T Consensus 110 G~lel~~~~~~~la~l~G~~~~--------~l~~~~GA~a~~~~l~~~r~~~~~~----Gd~~~~~Vlv~~~~hp~~~~~ 177 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDAV--------TLQPAAGAHGELTGLLMIRAYHEAR----GDTKRTEVIVPDSAHGTNPAS 177 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCce--------EEEeCcHHHHHHHHHHHHHHHhhcc----CcCCCCEEEEcCCccHhHHHH
Confidence 7889999999999999999753 3666677777777666554322111 11 345788999999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeec
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~ 283 (499)
++..|+ +++.+|++.+ +.+|+++|++++.++++ +|++++++ ++|.+ +|+++|+++|+++|+|+|||+
T Consensus 178 ~~~~G~---~vv~v~~~~~--~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~ 245 (481)
T PRK04366 178 AAMAGF---KVVEIPSNED--GLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDG 245 (481)
T ss_pred HHHcCC---EEEEeecCCC--CCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEe
Confidence 999999 9999999753 59999999999976553 67778877 89998 689999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcc-----eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC-
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC-----CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF- 357 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-----g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~- 357 (499)
|+..+.+.. .. .+-.++|++++++||||++|.|+ |+++++++ +.+.+ ++.+...... .....+
T Consensus 246 a~~~~~~g~--~~---~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~--~~~~l---p~~~v~~~g~-~~~l~~~ 314 (481)
T PRK04366 246 ANLNAILGK--AR---PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE--LAPFL---PVPVVEKDGD-RYRLDYD 314 (481)
T ss_pred cChhhhccc--CC---ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh--hHhhC---CCCeeeccCC-ceeeccc
Confidence 986542211 11 12225999999999999988665 58888864 22222 2222111100 000011
Q ss_pred CCcccCCCCCCC-----cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCC
Q 010842 358 KDWQVGTGRRFK-----SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 358 ~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~ 431 (499)
...++...+.+. ++++|..+..+|.+|++++.++..++++++++.|+++ +++.. .+.++.+.|...... ..
T Consensus 315 r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~-~~ 391 (481)
T PRK04366 315 RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLK-ET 391 (481)
T ss_pred ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECcccc-cc
Confidence 111222222222 3788999999999999999999999999999999987 34332 233344444432100 00
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEe-eeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTH-TIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
+....++.++|.+.|+..... .+......+|++++ ..+|++|||+++++|+++.+++.+++
T Consensus 392 ----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 392 ----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred ----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 012567888888888643211 01112357999995 89999999999999999998876654
No 20
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1.5e-31 Score=286.38 Aligned_cols=385 Identities=14% Similarity=0.101 Sum_probs=272.6
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc-----cChhhHHHHHHHHHHHHHH
Q 010842 67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL-----ASPASTELEIVVMDWLATM 141 (499)
Q Consensus 67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-----~~p~~~~lE~~~~~~la~l 141 (499)
.++.++++++.++-.++..-. + .|++--.+....++ ..+++...++.....+. .+.+..+++.++..||+++
T Consensus 466 ~sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsctmk~na-~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~el 542 (939)
T TIGR00461 466 HSETEMLRYLHRLESKDLALN-N-SMIPLGSCTMKLNA-TAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSI 542 (939)
T ss_pred CCHHHHHHHHHHHHhcCCCcc-c-cCCCCccCCCccCH-HHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence 388999999999877765432 2 45554333333343 44445333332222222 4556889999999999999
Q ss_pred cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC
Q 010842 142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~ 221 (499)
+|++.. ++..++|++|++++++++|.....+ + ..++.+|++|..+|.+..++++..|+ +++.||++
T Consensus 543 tGmd~~--------Sl~p~aGA~gE~agL~aiR~y~~~r-g--e~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d 608 (939)
T TIGR00461 543 TGFDAI--------SLQPNSGAQGEYAGLRVIRSYHESR-G--ENHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCD 608 (939)
T ss_pred HCCCCc--------ccCCchHHHHHHHHHHHHHHHHHhc-C--CCCCCEEEEEccccCcCHHHHHHCCC---EEEEeccC
Confidence 999853 4788888999999999988754211 0 11467899999999999999999999 99999998
Q ss_pred CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842 222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300 (499)
Q Consensus 222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~ 300 (499)
++| .+|+++|+++|++ .+..+.+|++++++| +|.++| +++|+++||++|.|++||||+......... .
T Consensus 609 ~~G--~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~-----P 677 (939)
T TIGR00461 609 QDG--NIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTS-----P 677 (939)
T ss_pred CCC--CcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCC-----c
Confidence 655 9999999999975 234567999999999 799977 999999999999999999999653332211 1
Q ss_pred CCCCCceeEecccccccCCCcc-----eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc----H
Q 010842 301 GIERVDSFSFSPHKWLLSYLDC-----CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS----L 371 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~~~-----g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a----l 371 (499)
+-.++|++++|.||+|+.|.|+ |++.+|+. +...+.. .......+..+.. .+.+...++.++. +
T Consensus 678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg---~~v~~t~d~~gre--q~Iga~s~~~~g~a~~~l 750 (939)
T TIGR00461 678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPK---HDVVSMITGIGGS--KSIGSVSAAPYGSASILP 750 (939)
T ss_pred cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCC---CcccccccCCCCc--cccccccccccCcHHHHH
Confidence 3335999999999999976655 99999964 3222221 1111100000000 0112233444554 8
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 372 RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 372 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
+.|+.++.+|.+|+++..+....+|+|+.++|++ +++++.+ +.++.++|++.+.. ++.+..+.++.++|.
T Consensus 751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~----~~~g~~~~dIakrL~ 824 (939)
T TIGR00461 751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK----AKTGIEAIDVAKRLQ 824 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh----hhcCCCHHHHHHHHH
Confidence 9999999999999999999999999999999987 4566654 45677888887531 112334678899999
Q ss_pred hcCCEEEEee-eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 448 STGRVYLTHT-IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 448 ~~g~~~~~~~-~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.|....+.+ +..+...+| ++ ..++++|||++++++.++.+++.+
T Consensus 825 d~G~hapt~~~pv~g~lmie--pT-E~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 825 DYGFHAPTLSFPVPGTLMVE--PT-ESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred hCCeeccccCCccCCeEEEE--ee-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9996543322 233443444 43 568999999999999999887754
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-30 Score=284.89 Aligned_cols=382 Identities=14% Similarity=0.079 Sum_probs=265.6
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCC--ccc---ccChhhHHHHHHHHHHHHHH
Q 010842 67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVG--FNW---LASPASTELEIVVMDWLATM 141 (499)
Q Consensus 67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~p~~~~lE~~~~~~la~l 141 (499)
.++.++++.+.++-.++.....+..++|.. .....|.+....+ .++... +.| +.+.+..+++.++.+|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsc-t~~~~p~~~~~~~--~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSC-TMKLNAAAEMIPI--TWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcC-CCcCCHHHHHHHH--hCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999999888877655566678872 2233333222222 222111 111 34556889999999999999
Q ss_pred cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeC
Q 010842 142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT 220 (499)
Q Consensus 142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~ 220 (499)
+|++.. .+..+||++|++.+|+++|...... |. ++.+|++|+.+|.|..+++.++|+ +++.||+
T Consensus 555 tG~d~~--------sl~~~~ga~ge~agL~a~r~~~~~~----G~~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~ 619 (954)
T PRK05367 555 TGYDAV--------SLQPNAGAQGEYAGLLAIRAYHESR----GEGHRDVCLIPSSAHGTNPASAVMAGM---KVVVVAC 619 (954)
T ss_pred HCCCCE--------EECccHHHHHHHHHHHHHHHHhhcc----CCCCCCEEEEEchhhhhhHHHHHHCCC---EEEEECC
Confidence 999853 2455677899999998877533221 21 356799999999999999999999 9999999
Q ss_pred CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842 221 SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300 (499)
Q Consensus 221 ~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~ 300 (499)
+.++ .+|+++|+++++++ +..+++|++++++|..+..+|+++|+++||++|+|+|||||+.++.+.... .
T Consensus 620 d~~G--~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-----p 689 (954)
T PRK05367 620 DENG--NIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR-----P 689 (954)
T ss_pred CCCC--CcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC-----h
Confidence 8655 99999999999753 224778999999987444589999999999999999999999755433221 1
Q ss_pred CCCCCceeEecccccccCCCcce-----EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC----CcH
Q 010842 301 GIERVDSFSFSPHKWLLSYLDCC-----CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF----KSL 371 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~~~g-----~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~al 371 (499)
+..++|++++|+|||+++|.|+| ++++|+. + .+|+.+....... +-...+...+.++ .++
T Consensus 690 g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l-------~p~lpg~~v~~~~--~~~~~g~v~ta~~g~al~~~ 758 (954)
T PRK05367 690 GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--L-------APFLPGHPVQIAG--GETGIGAVSAAPFGSASILP 758 (954)
T ss_pred hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--c-------cccCCCCccCcCC--CCCCcCcchhHHHHHHHHHH
Confidence 22359999999999998887755 8998752 2 1233221100000 0000111222222 345
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--C--CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 372 RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--P--RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 372 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~--~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
..|+.++.+|.+|+++..++...+|+|++++|++. +++.. + +..+.++|.+.+... + .+..+.++.++|.
T Consensus 759 ~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~--~--~g~~~~di~krL~ 832 (954)
T PRK05367 759 ISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKE--S--TGITVDDIAKRLI 832 (954)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccc--c--CCCCHHHHHHHHH
Confidence 78999999999999999999999999999999874 44332 2 345566776653210 0 0112467888888
Q ss_pred hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.|....+. .+.....+|++++ ..++++|||+++++++.+..++.+
T Consensus 833 d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 833 DYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence 889654431 2323456999995 899999999999999999888754
No 22
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=3.5e-29 Score=252.33 Aligned_cols=374 Identities=16% Similarity=0.153 Sum_probs=243.6
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCCC--------Cccc---------cccCCCCCChHHHHHHHHHHHcccCCcccc
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHWL--------SPNF---------FAFFPATVSTAGFLGEMLCACFNSVGFNWL 122 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~--------~p~~---------~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 122 (499)
..+|++|.+.+.|...|.++-.-+..+|. ..|- +++..+- +--+|++. .+..-.
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgi----gr~~~l~~-----~q~ka~ 98 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGI----GRSGDLVA-----PQPKAA 98 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCC----CCcccccc-----cCcccc
Confidence 47899999999998888887655555554 1121 1111110 00011100 011223
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
.++....++.++..|+++++|.+... .+++++||| +++.+++.+++.+. .++..|+++..+|.|+
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~th~S~ 164 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRIDQKSC 164 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcChHHH
Confidence 45667889999999999999998431 358999999 79999988876421 1234566777889999
Q ss_pred HHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 202 AKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.|++.++|+ .++.||+. ++++|.+|+++|+++|++.+ ...+.+|+.+.+++..|..||+++|+++|++||+|+|
T Consensus 165 ~kAi~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lI 239 (444)
T TIGR03531 165 IKAISTAGF---EPRVIETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHI 239 (444)
T ss_pred HHHHHHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEE
Confidence 999999999 99999952 23469999999999998532 1234455555555667789999999999999999999
Q ss_pred eeccccchhccCccchhhh-cC--CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 281 VDAAYAGSACICPEFRHYL-NG--IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~-~g--~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
||+|||... +.+.+.. .+ .+++|++++|+||++.+|.++|++++++++... .+.. .|....
T Consensus 240 vDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~-~i~~--~y~g~~---------- 303 (444)
T TIGR03531 240 VNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQ-EISK--SYPGRA---------- 303 (444)
T ss_pred EECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHH-HHHH--hccCCC----------
Confidence 999998643 2223322 23 235899999999999999999999998887553 3322 121100
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceE-EEEEecCCCCCCcc
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFAL-VCFRLNPYPHSGSA 433 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~-v~f~~~~~~~~~~~ 433 (499)
....++.+|+++..+|.+++++++++..++++++.+.|+++. |.+++..|...+ +++.+... .+.
T Consensus 304 --------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~---~~~ 372 (444)
T TIGR03531 304 --------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTL---KGK 372 (444)
T ss_pred --------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccc---ccc
Confidence 112368899999999999999999999999999999998753 456664433222 23333211 011
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEee--eECCE--------------EEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGRVYLTHT--IVGGL--------------YMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~--------------~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+...+...|..+-..--+++.... .+.|. .++=++. ...++++|||.+++.|.++
T Consensus 373 ~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 373 DPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAA-AIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHH-HhCCcHHHHHHHHHHHhhc
Confidence 223333333332211111221111 12221 1233332 2457999999999999864
No 23
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=6.5e-29 Score=257.11 Aligned_cols=380 Identities=14% Similarity=0.099 Sum_probs=253.0
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHH------HHHcccCCcccccC
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEML------CACFNSVGFNWLAS 124 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l------~~~~n~~~~~~~~~ 124 (499)
|++++...+.++|+++ +.+++++++.++..++.....|+.++|.-..+...|..+.+.+ +. ++++... .+
T Consensus 32 p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~--~~ 107 (447)
T PRK00451 32 PEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPE--IS 107 (447)
T ss_pred CHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCc--cc
Confidence 7788888888999875 9999999999987666655568889885444333444443332 22 4443332 34
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++..+...+..+|+++++|++.+ .+++|+|||+++..++. ++... ++..|++++..|.++.++
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~~~~~-a~~~~---------~g~~Vlv~~~~~~~~~~~ 170 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAEAALM-AVRIT---------KRKKVLVSGAVHPEYREV 170 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHHHHHH-HHHhc---------CCCEEEEeCccCHHHHHH
Confidence 55667777777899999999865 46899999976544443 33211 456788899999999988
Q ss_pred HHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 205 CKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 205 ~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
++. .|+ +++.||+++ + ++|+++|+++|+++++ +|+++++ |++|.++|+++|+++|+++|+|++
T Consensus 171 ~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t~------~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~i 237 (447)
T PRK00451 171 LKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDTA------AVVVQYP-NFFGVIEDLEEIAEIAHAGGALFI 237 (447)
T ss_pred HHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCeE------EEEEECC-CCCCeeCCHHHHHHHHHHCCCEEE
Confidence 775 577 999999875 3 8999999999976543 7777877 789999999999999999999999
Q ss_pred e--eccccchhccCccchhhhcCCCCCceeEeccccc-----ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 281 V--DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW-----LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 281 v--D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~-----l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
| |....+ .+..+ +--++|.+++++||| +++| ++|+++++++. . +.+. +.+.+......+
T Consensus 238 v~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~-~~~~---~~~~g~~~~~~~ 303 (447)
T PRK00451 238 VGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-V-RQMP---GRLVGETVDADG 303 (447)
T ss_pred EEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-H-hhCC---CCEeeeecccCC
Confidence 8 544222 11111 112589999999997 4445 79998887632 2 2221 111100000000
Q ss_pred cccC----------CCcccCCCCCC-----CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 354 VVDF----------KDWQVGTGRRF-----KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 354 ~~~~----------~~~~~~~sr~~-----~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
...+ ..+..+..... .++..+.+++.++.+|++++.++..++++++.+.|+++++++++..+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 383 (447)
T PRK00451 304 KRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFN 383 (447)
T ss_pred CeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEE
Confidence 0000 00000000000 11344555677889999999999999999999999999999887444444
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE-EEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY-LTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+++++.. . ..++.++|.++|++. +....+ .-..++|++++ ..+|++||++++++|+++.
T Consensus 384 ~~~v~~~~-~----------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 384 EFVVRLPK-P----------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEEEecCC-C----------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence 45555421 1 356777887777542 111111 11247999994 7899999999999998753
No 24
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=4.7e-28 Score=245.64 Aligned_cols=342 Identities=15% Similarity=0.118 Sum_probs=233.0
Q ss_pred ccccCCCCCChHHHHHHHHHHHccc---CC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNS---VG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
|+.+-..++.++.+ .+.+..++.. |. ..+..++......+++++++++++|.+.+ ..++|+|+|+++.
T Consensus 2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 55555555555544 4444433321 11 11222345566777889999999998754 4689999999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
.++....... + ++.+|+++...|+++...... .|+ +++.||++.+ +.+|+++|++.+++++
T Consensus 74 ~al~~~~~~~-~-------~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~--g~~~~~~l~~~i~~~~--- 137 (379)
T TIGR03402 74 TAIKSALAAQ-P-------EKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDEE--GRLDLEELRAAITDDT--- 137 (379)
T ss_pred HHHHHHHHhc-C-------CCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCCC--CcCCHHHHHHhcCCCc---
Confidence 8887764311 0 345788899999987655443 488 9999998754 4899999999986543
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
.+|++++++|++|.+.|+++|+++|+++|+++|+|++++.+....+- .. ..+|++++++|| +++|.|+|+
T Consensus 138 ---~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~-----~~-~~~D~~~~s~~K-~~gp~G~g~ 207 (379)
T TIGR03402 138 ---ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDL-----KE-MNIDMLSLSGHK-LHGPKGVGA 207 (379)
T ss_pred ---EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCc-----cc-CCCCEEEEcHHH-cCCCCceEE
Confidence 47888999999999999999999999999999999999865433221 11 248999999999 667999999
Q ss_pred EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
+++++... ..+ ++.+... ....+.+.. . ..+.+..+++.+ .+++++..++..++++++.+.
T Consensus 208 l~v~~~~~------~~p-~~~g~~~---------~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~ 270 (379)
T TIGR03402 208 LYIRKGTR------FRP-LLRGGHQ---------ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAG 270 (379)
T ss_pred EEECCCCC------CCC-cccCCcc---------CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 99986431 112 2211110 000111111 1 122334444443 456788888999999999999
Q ss_pred Hhc-CCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC------------------
Q 010842 403 VKS-DPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG------------------ 460 (499)
Q Consensus 403 L~~-~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~------------------ 460 (499)
|++ +|++++..++. .+++.|.+.... ..++.+.|.++|+.+-++....
T Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~ 340 (379)
T TIGR03402 271 LLARIPDARLNGDPTKRLPNTVNISFEYIE----------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT 340 (379)
T ss_pred HHhhCCCEEEeCCCccCCCCEEEEEecCCC----------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence 986 89999886432 346777765432 3466777767775443322110
Q ss_pred -CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 461 -GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 461 -g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
....+|+|+ ++++|++|||++++.|+++.+++.+
T Consensus 341 ~~~~~vR~S~-~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 341 AAHGSIRFSL-SRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred hcCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 125799999 5999999999999999998877543
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.3e-28 Score=246.28 Aligned_cols=318 Identities=15% Similarity=0.159 Sum_probs=225.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
.+..++.......++++++++++|.+ +. ..++|+|+|+|+..++.+.... ..++..|+++..+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~~--------~~~g~~vl~~~~~~ 98 (373)
T cd06453 34 VHELSARATDAYEAAREKVARFINAPSPD-------EIIFTRNTTEAINLVAYGLGRA--------NKPGDEIVTSVMEH 98 (373)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCCHHHHHHHHHHHhhhc--------CCCCCEEEECcchh
Confidence 44556667788888899999999987 33 3589999999988888776431 01355788899999
Q ss_pred hhH----HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842 199 STF----AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE 274 (499)
Q Consensus 199 ~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~ 274 (499)
++. .+.++..|+ +++.||++.+ +.+|+++|++.+.+++ .+|++++++|++|.+.|+++|+++|++
T Consensus 99 ~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~~------~~v~~~~~~~~tG~~~~~~~i~~~~~~ 167 (373)
T cd06453 99 HSNIVPWQQLAERTGA---KLKVVPVDDD--GQLDLEALEKLLTERT------KLVAVTHVSNVLGTINPVKEIGEIAHE 167 (373)
T ss_pred HHHHHHHHHHHhhcCc---EEEEeecCCC--CCcCHHHHHHHhcCCc------eEEEEeCcccccCCcCCHHHHHHHHHH
Confidence 884 445567788 9999998854 5899999999997643 478899999999999999999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC--
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN-- 352 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~-- 352 (499)
+|+|+|+|++|+.+....+ .. . .++|++++++|||++. .++|+++++++ .+ +.+. .+..+......
T Consensus 168 ~~~~li~D~a~~~~~~~~~-~~----~-~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~-~~~~---~~~~g~~~~~~~~ 235 (373)
T cd06453 168 AGVPVLVDGAQSAGHMPVD-VQ----D-LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL-EEMP---PYGGGGEMIEEVS 235 (373)
T ss_pred cCCEEEEEhhhhcCceeee-cc----c-cCCCEEEeccccccCC-CCcEEEEEchH-Hh-hcCC---CeecCCCcccccc
Confidence 9999999999976543221 11 1 1489999999999987 68898888754 22 2221 11111100000
Q ss_pred -CcccCC--CcccCCCCC--CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEec
Q 010842 353 -SVVDFK--DWQVGTGRR--FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLN 425 (499)
Q Consensus 353 -~~~~~~--~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~ 425 (499)
....+. ......+.+ ...+.+|.+++.+...+++++.++..++++++.+.|+++|+++++.++ ..++++|.+.
T Consensus 236 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (373)
T cd06453 236 FEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE 315 (373)
T ss_pred ccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC
Confidence 000000 001111111 134678888988888899999999999999999999999999988532 4567888764
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------ECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
... ..++.++|.++|+.+..+.. .+...++|+++. +.+|++|+|+++++|
T Consensus 316 ~~~----------~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 316 GIH----------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred CcC----------HHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 322 35677788777865432221 112457999995 889999999999864
No 26
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=6e-28 Score=246.89 Aligned_cols=352 Identities=15% Similarity=0.131 Sum_probs=240.6
Q ss_pred cccccCCCCCChHHHHHHHHHHHc-----ccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACF-----NSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~ 164 (499)
.|+.+-..++.+..++ +.+..++ |+....+..++.......++++.+++++|.+ ++ ..++|+|+|+
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-------~v~~t~g~t~ 96 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE-------ELVFVRGTTE 96 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence 6788776666555544 4443333 2212233345556666777889999999973 33 3689999999
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 240 (499)
++..++.+....... ++..|+++...|.+ +...++..|+ +++.+|++++ +.+|+++|++++.++
T Consensus 97 ~l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~ 164 (406)
T PRK09295 97 GINLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPD--GTLQLETLPALFDER 164 (406)
T ss_pred HHHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCC--CCCCHHHHHHhcCCC
Confidence 987666543211111 45678889988876 3556677899 9999998764 489999999998654
Q ss_pred HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL 320 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 320 (499)
+ .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+- .. ..+|++++++||+ ++|.
T Consensus 165 t------~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~-----~~-~~~D~~~~s~~K~-~gp~ 231 (406)
T PRK09295 165 T------RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDV-----QA-LDCDFYVFSGHKL-YGPT 231 (406)
T ss_pred c------EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCc-----hh-cCCCEEEeehhhc-cCCC
Confidence 4 48999999999999999999999999999999999999766433221 11 1489999999995 4588
Q ss_pred cceEEEEeCchhHHHhhcCCccCCCCCCC-C---CCCcccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHH
Q 010842 321 DCCCLWVKQPGLLVKALSTDPEYLKNKPS-E---SNSVVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSD 392 (499)
Q Consensus 321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~---~~~~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~ 392 (499)
|+|+++++++. + +.+ +++..+... . ......+ ....++.|.+. ..+.+..+++.+...|++++.++.
T Consensus 232 G~G~l~~~~~~-~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 232 GIGILYVKEAL-L-QEM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred CcEEEEEchHh-H-hhC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 99999997642 2 211 223222110 0 0000000 01122333222 235677778777667888888999
Q ss_pred HHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------ECCEE
Q 010842 393 IRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLY 463 (499)
Q Consensus 393 ~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~ 463 (499)
.++++++.+.|+++++++++.+ ...++++|.+.... ...+.+.|.+.|+.+-++.. ++...
T Consensus 307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~ 376 (406)
T PRK09295 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH----------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA 376 (406)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC----------HHHHHHHHHhCCeEEeccccchHHHHHHHCCCC
Confidence 9999999999999999998864 34678888875432 34566667777754432221 11124
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 464 MLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
++|+|+ ++++|++|||+++++|+++..
T Consensus 377 ~iRiS~-~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 377 MCRASL-AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence 799999 599999999999999998754
No 27
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=7e-28 Score=246.16 Aligned_cols=355 Identities=16% Similarity=0.146 Sum_probs=244.4
Q ss_pred ccccccCCCCCChHHHHHHHHHHHcccC-----CcccccChhhHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFNSV-----GFNWLASPASTELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt 163 (499)
..|+.+-..++.+..++ +.+..++... ...+..+........++++.+++++|. +.+ ..++|+|+|
T Consensus 20 ~~yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~~~~~t 91 (401)
T PRK10874 20 GVYLDSAATALKPQAVI-EATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK-------NIVWTRGTT 91 (401)
T ss_pred eEEEeCCcccCCCHHHH-HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC-------EEEEECCHH
Confidence 35777776665554444 4444444321 122233445566777788999999998 433 468899999
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA 239 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~ 239 (499)
+++...+.+...... .++..|+++...|++ +.+.++..|+ +++.||++.+ +.+|++++++.+++
T Consensus 92 ~~i~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~ 159 (401)
T PRK10874 92 ESINLVAQSYARPRL-------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGAD--RLPDVDLLPELITP 159 (401)
T ss_pred HHHHHHHHHhhhccC-------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCC--CcCCHHHHHHhcCc
Confidence 987776665421100 145689999999976 4566788899 9999998753 58999999999976
Q ss_pred HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842 240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319 (499)
Q Consensus 240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 319 (499)
+++ +|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ +..+ .+|.+++++||+ ++|
T Consensus 160 ~t~------lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp 226 (401)
T PRK10874 160 RTR------ILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-----VQAL-DIDFYAFSGHKL-YGP 226 (401)
T ss_pred CcE------EEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-----chhc-CCCEEEEecccc-cCC
Confidence 543 788999999999999999999999999999999999975543221 1112 389999999995 458
Q ss_pred CcceEEEEeCchhHHHhhcCCccCCCCCCC-CCCC--cccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHH
Q 010842 320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNS--VVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSD 392 (499)
Q Consensus 320 ~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~--~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~ 392 (499)
.|+|+++++++. + +.+ .++..+... .... ...+ ..+.++.|.+. ..+.+..++..+...|+.+..++.
T Consensus 227 ~G~G~l~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 227 TGIGVLYGKSEL-L-EAM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS 301 (401)
T ss_pred CccEEEEEchHH-H-hcC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 899999987542 2 222 222211100 0000 0000 11122222222 345667777777677788888889
Q ss_pred HHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCEEE
Q 010842 393 IRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGLYM 464 (499)
Q Consensus 393 ~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~~~ 464 (499)
.++++++.+.|+++|+++++.++..++++|.+.+.. ..++.+.|.++|+++..+... +...+
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~ 371 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH----------HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGT 371 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC----------HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCE
Confidence 999999999999999999887777788888875422 356777777788755443322 22468
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 465 LRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 465 lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+|+|+. +++|++||++++++|+++++.+
T Consensus 372 iRiS~~-~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 372 LRASFA-PYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence 999995 8899999999999999987754
No 28
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=4.1e-28 Score=245.93 Aligned_cols=313 Identities=15% Similarity=0.152 Sum_probs=221.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH----
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA---- 202 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~---- 202 (499)
......++++++++++|.+... ..++|+|+|+++.+++.+... ++..|+++...|.++.
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 104 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLE 104 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHH
Confidence 3456667788899999986431 358899999988777655311 4567888888998865
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
..++..|+ +++.|+.+.+ +.+|+++|+++++++ +.+|++++++|+||.+.|+++|.++|+++|++++||
T Consensus 105 ~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD 173 (376)
T TIGR01977 105 CLKEQIGV---EITIVKCDNE--GLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD 173 (376)
T ss_pred HHHHHcCc---EEEEEecCCC--CCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE
Confidence 34556688 9999998754 589999999998643 448889999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV 362 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 362 (499)
+|++.+....+-. -..+|++++++|||+++|.|+|++++++...+.........+ ...... ........+
T Consensus 174 ~a~~~g~~~~~~~------~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~r~ 243 (376)
T TIGR01977 174 AAQTAGVIPIDMT------ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGS-HSALID---QPSELPDRF 243 (376)
T ss_pred hhhccCccCCCch------hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcc-cccccc---ccccchhhc
Confidence 9998765433211 124999999999999999999999998865221111110000 000000 000000011
Q ss_pred CCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhH
Q 010842 363 GTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 363 ~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~ 436 (499)
+.+... ....++.+++.+...|++.+.++..++++++.+.|++.++++++.+. ..++++|...+..
T Consensus 244 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 315 (376)
T TIGR01977 244 ESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID-------- 315 (376)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC--------
Confidence 222221 23566778888888899999999999999999999999999988642 3578888875432
Q ss_pred HHHHHHHHHHHhc-CCEEEEeeeE----------CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNST-GRVYLTHTIV----------GGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 437 ~~~~~l~~~l~~~-g~~~~~~~~~----------~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
..++.+.|.+. |+.+..+... .....+|+++ +..+|++||++++++|++
T Consensus 316 --~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 --SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred --HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence 35677777776 6433222111 1235799998 489999999999999975
No 29
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=8.2e-28 Score=245.40 Aligned_cols=354 Identities=16% Similarity=0.131 Sum_probs=242.0
Q ss_pred cccccCCCCCChHHHHHHHHHHHccc---C--CcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNS---V--GFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~ 164 (499)
.|+.+-..++.+. .+.+.+..++.. + ...+..++...+...++++.+++++|.+ .+ ..++|+|+|+
T Consensus 18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~t~g~t~ 89 (398)
T TIGR03392 18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE-------NIVWTRGTTE 89 (398)
T ss_pred EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCChHH
Confidence 5777766665444 445555554421 1 1122233445566677889999999985 33 3589999999
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 240 (499)
++..++.+...... .++..|+++...|++ +...++..|+ +++.+|++.+ +.+|+++|++++.++
T Consensus 90 ~l~~~~~~~~~~~~-------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 90 SINLVAQSYARPRL-------QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGAD--LLPDIRQLPELLTPR 157 (398)
T ss_pred HHHHHHHHhhhccC-------CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence 98877765421100 145679999999977 4556788899 9999999764 489999999998765
Q ss_pred HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL 320 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 320 (499)
++ +|++++++|+||.+.|+++|+++|+++|+++++|++|+.+....+ . ..+ .+|.+++++||++ .|.
T Consensus 158 t~------lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~-gp~ 224 (398)
T TIGR03392 158 TR------ILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-V----QAL-DIDFYAFSGHKLY-GPT 224 (398)
T ss_pred ce------EEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-h----hhc-CCCEEEEeccccc-CCC
Confidence 43 788899999999999999999999999999999999976543221 1 111 3899999999955 588
Q ss_pred cceEEEEeCchhHHHhhcCCccCCCCCCC-CCCC--cccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842 321 DCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNS--VVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDI 393 (499)
Q Consensus 321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~--~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~ 393 (499)
|+|+++++++ .+ +.+ +++...... .... ...+ ..+.++.|.+. ..+.+..+++.+...|++++.++..
T Consensus 225 G~G~l~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 225 GIGVLYGKTE-LL-EAM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred ceEEEEEcHH-HH-hhC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999988754 22 222 222211100 0000 0000 01122222222 2356777777776678888889999
Q ss_pred HHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCEEEE
Q 010842 394 RLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGLYML 465 (499)
Q Consensus 394 ~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~~~l 465 (499)
++++++.+.|+++|++++..++..++++|.+.+.. .+.+.+.|.++|+.+..+... +...++
T Consensus 300 ~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~----------~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~i 369 (398)
T TIGR03392 300 SLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH----------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTL 369 (398)
T ss_pred HHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC----------HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEE
Confidence 99999999999999999887677788888865432 356777777777544333211 123589
Q ss_pred EEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 466 RFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 466 Ri~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
|+|+. +++|++||++++++|+++++.+
T Consensus 370 RvS~~-~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 370 RASFA-PYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence 99995 8899999999999999987653
No 30
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=9.5e-28 Score=245.47 Aligned_cols=355 Identities=16% Similarity=0.126 Sum_probs=238.3
Q ss_pred cccccCCCCCChHHHHHHHHHHHcc-----cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFN-----SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
.|+.+-..++.+.. +.+.+..++. ++...+..++.....-.++++.+++++|.+.. ...++|+|+|++
T Consensus 20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence 46666655544443 4455544432 22122333344555566788889999999732 146899999998
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF----AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 241 (499)
+..++.+....... ++..|+++...|.+. .+.++..|+ +++.||++++ +.+|+++|++.+.+++
T Consensus 93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDDD--GTLDLDDLEKLLTEKT 160 (403)
T ss_pred HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCCC--CCCCHHHHHHHhccCC
Confidence 77666554221111 466899999998873 466778898 9999999854 5899999999986543
Q ss_pred HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842 242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD 321 (499)
Q Consensus 242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 321 (499)
.+|++++++|++|.+.|+++|+++|+++|+++|||++|+.+....+ . ... .+|++++++||+++ |.|
T Consensus 161 ------~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-~----~~~-~~d~~~~s~~K~~g-p~G 227 (403)
T TIGR01979 161 ------KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-V----QAL-DCDFYVFSGHKMYG-PTG 227 (403)
T ss_pred ------eEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-c----ccc-CCCEEEEecccccC-CCC
Confidence 4889999999999999999999999999999999999976543221 1 111 48999999999764 889
Q ss_pred ceEEEEeCchhHHHhhcCCccCCCCCCCC-C----CCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHH
Q 010842 322 CCCLWVKQPGLLVKALSTDPEYLKNKPSE-S----NSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIR 394 (499)
Q Consensus 322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~----~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~ 394 (499)
+|++++++. .+ +.+ .++..+.... . ........+.++.+.+. ..+.++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LL-EQM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HH-hcC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999998754 22 222 1121111000 0 00000001112222221 23566777777766678889999999
Q ss_pred HHHHHHHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--------eECCE
Q 010842 395 LAKMFEGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--------IVGGL 462 (499)
Q Consensus 395 ~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~g~ 462 (499)
+++++.+.|+++++++++.++ ..++++|.+.+.. ..++.+.|.+.|+.+-.+. .+...
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~ 372 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH----------PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVP 372 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC----------HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCC
Confidence 999999999999999998643 3678888875432 3456677777775432211 11223
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 463 YMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++|+|+. +++|++||++++++|+++.+.+
T Consensus 373 ~~iRiS~~-~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 373 ATCRASFY-IYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEEEec-cCCCHHHHHHHHHHHHHHHHHh
Confidence 57999994 8899999999999999887754
No 31
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=1.5e-27 Score=240.31 Aligned_cols=296 Identities=16% Similarity=0.128 Sum_probs=210.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
++....+.+++++.+++++|.+++ ..++|+|+|+|+..++..+.....+ ++..|+++...|+++..
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~ 103 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESNNLAIKGVMHFYKD-------KKKHVITTQTEHKCVLD 103 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccC-------CCCEEEEcccccHHHHH
Confidence 355567777889999999998754 3699999999999888776543211 45678889999999766
Q ss_pred HHH---HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 204 VCK---LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 204 a~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.+. ..|+ +++.+|++++ +.+|+++|+++|+++++ +|++++++|++|.+.|+++|+++||++|+|+|
T Consensus 104 ~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~t~------lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~ 172 (364)
T PLN02651 104 SCRHLQQEGF---EVTYLPVKSD--GLVDLDELAAAIRPDTA------LVSVMAVNNEIGVIQPVEEIGELCREKKVLFH 172 (364)
T ss_pred HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCCcE------EEEEECCCCCceecccHHHHHHHHHHcCCEEE
Confidence 554 3477 8999998754 58999999999976543 78999999999999999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
||++++.+....+- ..+ ++|++++++||| ++|.|+|+++++++... ...+.+ .+.... .
T Consensus 173 vD~a~~~g~~~~~~-----~~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~----~l~p~~-~g~~~~---------~ 231 (364)
T PLN02651 173 TDAAQAVGKIPVDV-----DDL-GVDLMSISGHKI-YGPKGVGALYVRRRPRV----RLEPLM-SGGGQE---------R 231 (364)
T ss_pred EEcchhhCCcccCc-----ccC-CCCEEEechhhh-CCCCceEEEEEcCCCCC----CCCccc-cCCCcc---------C
Confidence 99999877554321 111 389999999998 67999999999975321 111221 111100 0
Q ss_pred cc-CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC--CC---ceEEEEEecCCCCCCc
Q 010842 361 QV-GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP--RH---FALVCFRLNPYPHSGS 432 (499)
Q Consensus 361 ~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~--~~---~~~v~f~~~~~~~~~~ 432 (499)
.. .++... ..+.+..++..+.. +.+++.++..++++++.+.|++ +|+++++.+ +. .++++|.+.+..
T Consensus 232 ~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~---- 306 (364)
T PLN02651 232 GRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE---- 306 (364)
T ss_pred CccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC----
Confidence 01 122222 23456666666643 4588889999999999999985 689999874 22 358888885432
Q ss_pred chhHHHHHHHHHHHHhcCCEEEEeee---------------EC-----CEEEEEEeccCCCCcHHHHH
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLTHTI---------------VG-----GLYMLRFAVGASLTDERHVV 480 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~~~~---------------~~-----g~~~lRi~~~~~~~t~~di~ 480 (499)
.+++.++|.+ +.++.+. ++ ..+.+|+|+ +++||++|||
T Consensus 307 ------~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~-~~~~t~~did 364 (364)
T PLN02651 307 ------GESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGV-GRFTTEEEVD 364 (364)
T ss_pred ------HHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEc-CCCCCHHHcC
Confidence 3456666633 3333211 01 136899999 5999999985
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=1.2e-26 Score=236.75 Aligned_cols=342 Identities=15% Similarity=0.162 Sum_probs=224.8
Q ss_pred ccccccCCCCCChHHHHHHHHHHHcc---cCCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFN---SVGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 164 (499)
+.|+.+-..++.++.++. .+..++. .+.. .+..+.......+++++.+++++|.+++ ..++++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAE-KMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHHH-HHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 457777766665555544 3333331 1111 1111222345566678889999998754 3699999999
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 241 (499)
++..++.+......+ ++..|+++..+|.++..++.. .|+ +++.||++++ +.+|+++|++++.+++
T Consensus 76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~~ 143 (402)
T TIGR02006 76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKSN--GLIDLEELKAAIRDDT 143 (402)
T ss_pred HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCCC
Confidence 998887665432111 456788899999998777644 477 9999998864 4899999999986543
Q ss_pred HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842 242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD 321 (499)
Q Consensus 242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 321 (499)
.+|++++++|++|.+.|+++|+++|+++|+|+|||++++.+....+- .. ..+|++++++||++ +|.|
T Consensus 144 ------~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-----~~-~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 144 ------ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-----NE-LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred ------EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-----cc-cCCCEEEEehhhhc-CCCc
Confidence 48889999999999999999999999999999999999876543221 11 14999999999975 5999
Q ss_pred ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842 322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l 399 (499)
+|+++++++... ...+ .+..... ....+.+. .. ..+.+..+++.+ .++++.+.++..++++++
T Consensus 211 ~G~l~~~~~~~~----~~~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 211 IGALYVRRKPRV----RLEA-LIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred eEEEEEccCCCC----CCCc-eecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 999999875321 1111 1111100 00111111 11 123344455544 356888889999999999
Q ss_pred HHHHhcCCCeEEEcCC--Cc-e--EEEEEecCCCCCCcchhHHHHHHHHHHHH----hcCCEEEEeeeE-----------
Q 010842 400 EGFVKSDPRFEIVVPR--HF-A--LVCFRLNPYPHSGSADTEMLNRKLLDWVN----STGRVYLTHTIV----------- 459 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~~----------- 459 (499)
.+.|+++|+++++.++ .. . .++|...+ .+.+...+. ..|..+ ++...
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------~~~~~~~l~~i~v~~G~~c-~~~~~~~~~~l~~lg~ 342 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------GESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGI 342 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCcC------------HHHHHHhcCCEEEechhhc-CCCCCCccHHHHHcCC
Confidence 9999999998887532 22 2 34444221 122333331 122222 11100
Q ss_pred ---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 460 ---GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 460 ---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
....++|+|+ ++.+|++|||+++++|+++.+++
T Consensus 343 ~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 343 NDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred ChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 0136899999 58899999999999999988775
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.7e-26 Score=237.47 Aligned_cols=356 Identities=14% Similarity=0.123 Sum_probs=236.6
Q ss_pred ccccccCCCCCChHHHHHHHHHHHccc---CCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFNS---VGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 164 (499)
..|+.+-..++ +|..+.+.+..++.. +.. .+..+........++++.+++++|.++. ...++|+|+|+
T Consensus 33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS------REIVFTRNATE 105 (424)
T ss_pred eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEeCCHHH
Confidence 46788755554 444444555444321 111 1122233444556778899999998532 13699999999
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 240 (499)
++...+......... ++..|+++...|++ +...++..|+ +++.||++.++ .+|+++|++.|.++
T Consensus 106 al~~i~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~--~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANLK-------PGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDE--VLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcCC-------CcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCC--CcCHHHHHHHhccC
Confidence 877665532100001 45678889888886 3455677898 99999987654 79999999999754
Q ss_pred HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL 320 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 320 (499)
+ .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ +... .+|.+++++||+ ++|.
T Consensus 174 t------~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 T------KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHKM-CGPT 240 (424)
T ss_pred c------eEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeecccc-cCCC
Confidence 3 4889999999999999999999999999999999999975533221 1111 379999999995 5688
Q ss_pred cceEEEEeCchhHHHhhcCCccCCCCCCCCCCC---cccCC--CcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842 321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS---VVDFK--DWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDI 393 (499)
Q Consensus 321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~---~~~~~--~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~ 393 (499)
|+|++++++.. + +.+ ++++.+....... ...+. ...++.|.+ . ....+..+++.+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~-~~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-L-ESM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-h-hcC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999998642 2 222 2222211100000 00000 001122211 1 2345667777776678999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEcCC------CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeee--------
Q 010842 394 RLAKMFEGFVKSDPRFEIVVPR------HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTI-------- 458 (499)
Q Consensus 394 ~~a~~l~~~L~~~~~~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-------- 458 (499)
++++++++.|+++|+++++.+. ..++++|.+.... ..++.+.|.++ |+.+-.+..
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~----------~~~v~~~L~~~~gI~v~~g~~c~~~~~~~ 385 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH----------PTDLSTFLDQQHGVAIRSGHHCAQPLHRY 385 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC----------HHHHHHHhcccCCEEEechhhhhHHHHHH
Confidence 9999999999999999998642 3578888875432 34677777776 643322211
Q ss_pred ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+-..++|+|+ ++++|++||++++++|+++++.+
T Consensus 386 ~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 386 LGVNASARASL-YFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred hCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHH
Confidence 11135799999 69999999999999999988764
No 34
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=5.6e-26 Score=230.64 Aligned_cols=311 Identities=16% Similarity=0.156 Sum_probs=211.3
Q ss_pred hhHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 126 ASTELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
....++++. ..+.+.+|. +.+ ..++|+|+|+++..++.+.......+ .++..|+++...|+++...
T Consensus 40 ~~~~l~~a~-~~~~~~~~~~~~~-------~i~~t~g~teal~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~ 106 (382)
T TIGR03403 40 THPAIAEAL-DKLYKGINARDLD-------DIIITSCATESNNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRAT 106 (382)
T ss_pred HHHHHHHHH-HHHHHHcCcCCCC-------eEEEeCCHHHHHHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHH
Confidence 334555544 444556665 333 46899999999988887653211000 0245688898999887766
Q ss_pred H---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 205 C---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 205 ~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
. +..|+ +++.||++++ +.+|+++|++++.+++ .+|++++++|+||.+.|+++|+++|+++|+++|+
T Consensus 107 ~~~~~~~G~---~v~~v~~~~~--g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~iv 175 (382)
T TIGR03403 107 CAFLESLGV---EVTYLPINEQ--GTITAEQVREAITEKT------ALVSVMWANNETGMIFPIKEIGEICKERGVLFHT 175 (382)
T ss_pred HHHHHHCCC---EEEEEecCCC--CCCCHHHHHHhcccCC------eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEE
Confidence 4 45677 9999999865 4899999999987644 3788999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
|++++.+....+.. -..+|++++++|||+ +|.|+|++++|+...+ .+ .+.+.... ....
T Consensus 176 D~a~~~g~~~~~~~------~~~~D~~~~s~~K~~-gp~G~g~l~vr~~~~~------~p-~~~g~~~~----~~~~--- 234 (382)
T TIGR03403 176 DAVQAIGKIPVDVQ------KAGVDFLSFSAHKFH-GPKGVGGLYIRKGVEL------TP-LFHGGEHM----GGRR--- 234 (382)
T ss_pred echhhcCCCccCcc------ccCCCEEEEcchhhC-CCCceEEEEECCCCCC------CC-cccCCCCC----CCcc---
Confidence 99987654322211 124899999999985 5889999999875321 11 22111100 0000
Q ss_pred cCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--C-ceEEEEEecCCCCCCcchhHH
Q 010842 362 VGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--H-FALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 362 ~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~ 437 (499)
.++....+ +.+..+++.. .+.++...++..++++++.+.|+++|+++++.++ . .+++.|.+....
T Consensus 235 -~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 303 (382)
T TIGR03403 235 -SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVE--------- 303 (382)
T ss_pred -cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC---------
Confidence 01111112 2444455543 3457778889999999999999999999988653 2 346677765432
Q ss_pred HHHHHHHHHHhcCCEEEEeeeE--------------C-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIV--------------G-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~--------------~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
...+...|.++|+.+-.+... + ....+|+|++ +.+|++|||+++++|+++.+++.
T Consensus 304 -~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 304 -GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred -HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 345666677777544322111 0 1257999995 89999999999999999887753
No 35
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.2e-26 Score=233.49 Aligned_cols=342 Identities=11% Similarity=0.006 Sum_probs=233.0
Q ss_pred ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHH
Q 010842 94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA 173 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~a 173 (499)
.+.+++...+..+.+.+...+. . ..++...++.+++++++++++|.+... ..++++|||+|+..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence 3566666666666666643321 1 235667778888999999999995431 2578999999988887655
Q ss_pred HHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 174 RDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 174 r~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
.. ++..|+++...|++ +...++..|+ +++.+|++++ +.+|+++|++.+++. .|.+|+
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~-----~~~~v~ 129 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPWG--EAVSPEEIAEALEQH-----DIKAVT 129 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCCC--CCCCHHHHHHHHhcc-----CCCEEE
Confidence 32 45568777778887 4677888999 9999998764 589999999999751 234788
Q ss_pred EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842 252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~ 331 (499)
+++++|++|.+.|+++|+++|+++|+++++|++|+.+....+. .-..+|.++.++|||++.|.|+|+++++++.
T Consensus 130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~------~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~ 203 (356)
T cd06451 130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRM------DEWGVDVAYTGSQKALGAPPGLGPIAFSERA 203 (356)
T ss_pred EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccc------cccCccEEEecCchhccCCCCcceeEECHHH
Confidence 8899999999999999999999999999999988644321111 0114799999999999999999999997642
Q ss_pred hHHHhhc--C-CccCCCCCCCCCCCcccCCCcc-cCC-CCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 332 LLVKALS--T-DPEYLKNKPSESNSVVDFKDWQ-VGT-GRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 332 ~l~~~~~--~-~~~yl~~~~~~~~~~~~~~~~~-~~~-sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
...... . ...|+.... ...+.... ... +-... ...+..++..+...++++..++..++++++.+.|++
T Consensus 204 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 277 (356)
T cd06451 204 -LERIKKKTKPKGFYFDLLL-----LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA 277 (356)
T ss_pred -HHHHHhcCCCCceeecHHH-----HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 322221 1 111111000 00000000 011 11111 235566777777788999999999999999999998
Q ss_pred CCCeEEEcCC--CceEEE-EEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842 406 DPRFEIVVPR--HFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 406 ~~~~~~~~~~--~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~ 481 (499)
. +++++.++ ..+.+. ++..+.. ...++.+.|.++ |+.+..+.......++|++++ +.+|++||++
T Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~-~~~~~e~v~~ 346 (356)
T cd06451 278 L-GLKLLAKPELRSPTVTAVLVPEGV---------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM-GEATREDVLG 346 (356)
T ss_pred c-CCeeccCcccCCCceEEEECCCCC---------CHHHHHHHHHHhCCEEEecccccccCCEEEEecC-CCCCHHHHHH
Confidence 7 88887543 234443 4443210 145677888877 754433222222358999995 7899999999
Q ss_pred HHHHHHHHH
Q 010842 482 AWELIMEGA 490 (499)
Q Consensus 482 l~~~l~~~~ 490 (499)
++++|+++.
T Consensus 347 ~~~~l~~~~ 355 (356)
T cd06451 347 VLSALEEAL 355 (356)
T ss_pred HHHHHHHHh
Confidence 999998864
No 36
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=2.1e-26 Score=235.25 Aligned_cols=369 Identities=13% Similarity=0.071 Sum_probs=234.6
Q ss_pred HHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCccccc-----ChhhHHHHHHHHHHHHHHcCCC
Q 010842 71 TILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLA-----SPASTELEIVVMDWLATMLKLP 145 (499)
Q Consensus 71 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~lE~~~~~~la~l~g~~ 145 (499)
+|++++..+-.++...-.+-..++-...+..+|..+.+..... . ....|.. ..+..++.+++.+++++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 6777776643333322122245555445555666666655444 1 1122332 5677889999999999999987
Q ss_pred CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC----CCCCCeEEeeCC
Q 010842 146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG----VSPANIRALPTS 221 (499)
Q Consensus 146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G----~g~~~v~~v~~~ 221 (499)
.+ ..+++.+|+.+...++.+++... .++.+|+++...|.+...++..+| . +++.+|++
T Consensus 81 ~~-------~v~~~~~g~~~~~~~~~~~~~~~--------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~ 142 (398)
T cd00613 81 VA-------NASLQDEATAAAEAAGLAAIRAY--------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSD 142 (398)
T ss_pred cc-------ceeccCchHHHHHHHHHHHHhcc--------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccC
Confidence 43 23566656655444444443210 036688899999999999998888 7 89999986
Q ss_pred CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh-hHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842 222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV-EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300 (499)
Q Consensus 222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l-~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~ 300 (499)
++ +.+|+++|++++.+++ .+|+++.++ ++|.+.|+ ++|+++|++||+|+|+|++++.+....+.
T Consensus 143 ~~--~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~------ 207 (398)
T cd00613 143 EG--GTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP------ 207 (398)
T ss_pred CC--CCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCCh------
Confidence 53 4899999999886544 367788876 68999885 99999999999999999998654332211
Q ss_pred CCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCC-CCCCcccCCC----cccCCCC----
Q 010842 301 GIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNSVVDFKD----WQVGTGR---- 366 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~----~~~~~sr---- 366 (499)
+..++|++++++|||+ .|. ++|++++++. .. +.+.....+...... ......++.. ...+.++
T Consensus 208 ~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~ 284 (398)
T cd00613 208 GEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNIC 284 (398)
T ss_pred HHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccce
Confidence 1114899999999999 664 4667877653 22 222111111100000 0000000000 0000111
Q ss_pred ---CCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842 367 ---RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL 443 (499)
Q Consensus 367 ---~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~ 443 (499)
...+...|..+..++.++++++.++..++++++.+.|+++++......+...+++|++.... +....++.
T Consensus 285 ~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~ 357 (398)
T cd00613 285 TGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY-------GIRAEDLA 357 (398)
T ss_pred ecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc-------hHHHHHHH
Confidence 11234567777888899999999999999999999999986654222344556677664310 12346677
Q ss_pred HHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 444 DWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 444 ~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
++|.++|+.+ ......+...+|+++ +..+|++|||+++++|
T Consensus 358 ~~L~~~gi~~-~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 358 KALIDGGFHA-PTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred HhhhhcCccc-cccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 7888888643 221123446799999 6999999999999864
No 37
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=7.3e-26 Score=245.99 Aligned_cols=390 Identities=13% Similarity=0.012 Sum_probs=258.0
Q ss_pred CCCC--CCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHH---cccC-CcccccChhhHHHHHHH
Q 010842 61 SAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCAC---FNSV-GFNWLASPASTELEIVV 134 (499)
Q Consensus 61 ~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~---~n~~-~~~~~~~p~~~~lE~~~ 134 (499)
..|. .-.++.+++..+.++-.++..-.++-.-+| .+.--+-+.+.+...+. -+-. -..-++..+..++-.++
T Consensus 496 ~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~plg--sctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~ 573 (993)
T PLN02414 496 THPIFNQYHSEHELLRYLHRLQNKDLSLVHSMIPLG--SCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDL 573 (993)
T ss_pred cCcccccccCHHHHHHHHHHHhhcccccccCCccCc--ccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHH
Confidence 4454 236889999999887666553322222222 11111112222222211 1101 11223445777888899
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChH----HHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhC
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTS----DSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt----~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
.+|+++++|++. .+|++++| +|+++++.+..+.. |. .+.+|++|..+|.+....+.+.|
T Consensus 574 r~~la~i~g~~~---------v~f~pnaga~ge~a~~~vi~~~~~~~-------Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 574 GDLLCEITGFDS---------FSLQPNAGAAGEYAGLMVIRAYHLSR-------GDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHhCCCe---------EEEcCCCcHHHHHHHHHHHHHHHhcc-------CCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 999999999943 38888888 77777777663221 11 34589999999999999999999
Q ss_pred CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842 210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
+ +++.||++++| .+|+++|+++|++.+. ...+|++|+++|..|.++|+++|+++||++|+.++||||+..+.
T Consensus 638 ~---~vv~v~~d~~G--~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~ 709 (993)
T PLN02414 638 M---KIVVVGTDAKG--NINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ 709 (993)
T ss_pred C---EEEEeccCCCC--CcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc
Confidence 9 99999998765 9999999999985321 23489999999999999999999999999999999999986654
Q ss_pred ccCccchhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
..... .+--++|+++++.|||++.|.| +|+++++.. +. ..-|........ +.......+..+
T Consensus 710 ~~l~~-----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~---p~lPg~~v~~~~---~~~~r~~~s~iG 776 (993)
T PLN02414 710 VGLTS-----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA---PFLPSHPVVPTG---GIPRPEKTQPLG 776 (993)
T ss_pred cCcCC-----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hc---ccCCCCccccCC---CcccccCCCCcC
Confidence 22111 1112499999999999987765 999998873 21 222333221111 000000111123
Q ss_pred CCCC-------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcchh
Q 010842 365 GRRF-------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 365 sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~ 435 (499)
++.. .++..|..++.+|.+|+++..++...+++|++++|++..++....+ +.++.+.+.+.+.......
T Consensus 777 t~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~-- 854 (993)
T PLN02414 777 TISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGI-- 854 (993)
T ss_pred CccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCC--
Confidence 3332 2356788899999999999999999999999999987544433322 3445555555421100001
Q ss_pred HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
....+.++|.+.|..... ..+.....+|++.+ ...+++|||+++++|+.+..++.+
T Consensus 855 --~~~di~krL~d~Gihapt-~~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 855 --EPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPT-ESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred --CHHHHHHHHHHcCcEEee-eccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHHH
Confidence 125577778877854322 22334667999995 999999999999999999887753
No 38
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=2.1e-26 Score=232.77 Aligned_cols=319 Identities=18% Similarity=0.157 Sum_probs=223.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.+..+....++-+++.+.+++++|.+++. ..++++|+|+|+..++...+... + ++..|+++...|+
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~~~~~~~l~~~~-~-------~g~~vl~~~~~~~ 99 (371)
T PF00266_consen 34 VSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEALNAVASSLLNPL-K-------PGDEVLVTSNEHP 99 (371)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHHHHHHHHHHHHG-T-------TTCEEEEEESSHH
T ss_pred ccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhhhhhhhcccccc-c-------ccccccccccccc
Confidence 34445566777778889999999998721 45899999998877777764321 1 4667888999999
Q ss_pred hHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 200 TFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 200 s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
+.. ..++..|+ +++.+|.+.++ .+|+++++++|.++++ +|++++.+|.+|.+.|+++|+++||++
T Consensus 100 s~~~~~~~~~~~~g~---~v~~i~~~~~~--~~~~~~~~~~l~~~~~------lv~~~~~~~~tG~~~pi~~I~~~~~~~ 168 (371)
T PF00266_consen 100 SNRYPWEEIAKRKGA---EVRVIPADPGG--SLDLEDLEEALNPDTR------LVSISHVENSTGVRNPIEEIAKLAHEY 168 (371)
T ss_dssp HHHHHHHHHHHHTTE---EEEEEEEGTTS--SCSHHHHHHHHHTTES------EEEEESBETTTTBBSSHHHHHHHHHHT
T ss_pred ccccccccccccchh---hhccccccccc--hhhhhhhhhhhccccc------eEEeecccccccEEeeeceehhhhhcc
Confidence 866 44456789 99999998765 8999999999975544 899999999999999999999999999
Q ss_pred CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC-CCCc
Q 010842 276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE-SNSV 354 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~~~~ 354 (499)
|++++||++++.+....+-- . -++|.+++++|| +++|.|+|+++++++. +.+.......+-...... ....
T Consensus 169 ~~~~~vD~~~~~g~~~id~~-----~-~~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~ 240 (371)
T PF00266_consen 169 GALLVVDAAQSAGCVPIDLD-----E-LGADFLVFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYG 240 (371)
T ss_dssp TSEEEEE-TTTTTTSS--TT-----T-TTESEEEEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHC
T ss_pred CCceeEechhcccccccccc-----c-cccceeeecccc-cCCCCchhhheehhhh-hhccccccccccccccccchhcc
Confidence 99999999998876644311 1 148999999999 8889999999999864 222211111111000000 0000
Q ss_pred ccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCC
Q 010842 355 VDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYP 428 (499)
Q Consensus 355 ~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~ 428 (499)
.....+.++.|... ..+.+..+++.+...|++++.++..++++++.+.|+++++++++.+ ...++++|.+.+..
T Consensus 241 ~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 320 (371)
T PF00266_consen 241 LADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD 320 (371)
T ss_dssp HHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS
T ss_pred cccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCC
Confidence 00011112222221 1245566777777789999999999999999999999999998652 34678999886543
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--------CEEEEEEeccCCCCcHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--------GLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~di~~l 482 (499)
.+.+.+.|.++|+.+..+.... -..++|+|+ ++++|++|||+|
T Consensus 321 ----------~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l 371 (371)
T PF00266_consen 321 ----------ADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSL-HYYNTEEDVDRL 371 (371)
T ss_dssp ----------HHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred ----------HHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence 3667777888875443321111 126799998 699999999986
No 39
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=4.4e-25 Score=223.94 Aligned_cols=314 Identities=15% Similarity=0.124 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
..++.+.+++++|.+.. ++++|+|+||..++.+... ++..|+++...|++...+++..|+
T Consensus 65 ~~~l~~~lA~~~g~~~~---------~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G~ 124 (387)
T PRK09331 65 IADFHEDLAEFLGMDEA---------RVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAGL 124 (387)
T ss_pred HHHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC
Confidence 44445559999998653 8899999999888876632 566788999999999999999999
Q ss_pred CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH-cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842 211 SPANIRALPTSVDANFSLSPQLLRRAVEADVE-AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
+++.+|++.+.++.+|+++|++++++..+ .+..+.+|+++++++++|.+.|+++|+++|+++|+++|||+||+.+.
T Consensus 125 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~ 201 (387)
T PRK09331 125 ---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR 201 (387)
T ss_pred ---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC
Confidence 99999983222468999999999976422 22346789999999999999999999999999999999999998764
Q ss_pred ccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C
Q 010842 290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F 368 (499)
Q Consensus 290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 368 (499)
+..+-. . . ++|.+++++|||++.|.+.|+++++++ .+.........|..... . .+..+.+ .
T Consensus 202 ~~~~~~-~--~---g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~~-------~----~~~~~~~~~ 263 (387)
T PRK09331 202 MPVDGK-K--L---GADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKEV-------E----LLGCTLRGA 263 (387)
T ss_pred cCCCHH-H--c---CCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccce-------e----eeceecCch
Confidence 432211 1 1 489999999999999999999888653 23222222222221100 0 0111111 1
Q ss_pred CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 369 KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 369 ~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
.+..+++++..+- +. .+..++..++++++++.|++++|++++.+ ...+++.+...... ...........++.+.|
T Consensus 264 ~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~L 340 (387)
T PRK09331 264 PLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD-EIAKKHKRRGFFLYEEL 340 (387)
T ss_pred HHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh-HHhhhccccchhHHHHH
Confidence 2344445554431 11 23566778899999999999999998852 23455555543110 00000011124578888
Q ss_pred HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++|+..+. .....++|+..+ ..|++|+++++++|+++.+++
T Consensus 341 ~~~gI~~~~---~~~~~i~ri~~~--g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 341 KKRGIHGIK---PGATKEFKLSTY--GLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred HHcCceEEc---cCCceEEEEEec--cCCHHHHHHHHHHHHHHHHhc
Confidence 888864222 223455777664 368999999999999987764
No 40
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.95 E-value=1.9e-25 Score=238.05 Aligned_cols=388 Identities=13% Similarity=0.034 Sum_probs=260.2
Q ss_pred CCCCC--CCCCHHHHHHHHHhhhcCCCCCCCCcccccc-----CCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHH
Q 010842 60 DSAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAF-----FPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEI 132 (499)
Q Consensus 60 ~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~ 132 (499)
...|. .+.++.++++.+.++-.++..-..+..|+|- .+..-..|+...++.+. .+.+. .+.+.+.-++-.
T Consensus 470 ~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyqp-~e~sQG~lq~i~ 546 (954)
T PRK12566 470 LQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFAP-REQAEGYRAMID 546 (954)
T ss_pred ccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCCc-hhhhcCHHHHHH
Confidence 34453 4679999999999988887665556677775 44444455556666655 33322 244555555656
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEc-CChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
++.+|+++++|++.. .+. ++|+++++.++++.|.....+ |. .+.+|++|...|.+....+...|+
T Consensus 547 elq~~l~eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh~~~----Ge~~r~~vLIp~saHgtNpasa~~~Gi 613 (954)
T PRK12566 547 ELEAWLCAITGFDAI---------CMQPNSGAQGEYAGLLAIRRYHRSR----GQSQRDICLIPSSAHGTNPASAQMAGM 613 (954)
T ss_pred HHHHHHHHHHCCCeE---------eecCCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEecccccccCHHHHHHCCC
Confidence 666999999999875 444 478889988888877543322 22 356788999999887777888999
Q ss_pred CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842 211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
+++.||+|++| .+|+++|+++|++.. ....+|+++++++..+..+|+++|+++||++|+++++|||+.....
T Consensus 614 ---eVv~Vp~D~~G--~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~ 685 (954)
T PRK12566 614 ---RVVIVECDPDG--NVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV 685 (954)
T ss_pred ---EEEEeccCCCC--CcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc
Confidence 99999998765 999999999997321 2345788899988776668899999999999999999999864333
Q ss_pred cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC---chhHHHhhcCCccCCCCCC-CCCCCcccCCCcccCCCC
Q 010842 291 ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ---PGLLVKALSTDPEYLKNKP-SESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~---~~~l~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~sr 366 (499)
..+.. +--++|++++++|||++.|.|.|..++.. ++.+. +|+.+.. .+..+.. ....+....-
T Consensus 686 ~l~~P-----g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~-------pfLp~~P~~d~~G~~-~r~ga~S~~~ 752 (954)
T PRK12566 686 GLARP-----ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLA-------PFVANHPVVPVEGPD-PNNGAVSAAP 752 (954)
T ss_pred CCCCh-----hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhh-------hhccCCCCcCCCCCC-CCCCceeecc
Confidence 22211 11259999999999999999988887765 22222 2332211 0000000 0000000000
Q ss_pred CCC---cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHH
Q 010842 367 RFK---SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 367 ~~~---al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
... ++..|..++.+|.+ +.+.......+++|+.++|.+. +++... +.++.+.+...+.......+ .
T Consensus 753 ~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~~g~~----~ 825 (954)
T PRK12566 753 WGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQTGIS----E 825 (954)
T ss_pred cchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccccCCC----H
Confidence 112 46788889999998 8888888899999999999874 433322 22344445444211000011 2
Q ss_pred HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..+.++|.+.|..... ..+.....+|++.+ ...+++|||+++++|+++.+++
T Consensus 826 ~dvakRL~d~Gihapt-~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 826 EDVAKRLMDYGFHAPT-MSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HHHHHHHHHCCcEEeE-EeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHH
Confidence 4577777777753322 23344667999995 9999999999999999998875
No 41
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.7e-25 Score=226.99 Aligned_cols=317 Identities=12% Similarity=0.126 Sum_probs=217.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.+..+.....+.+++++.+++++|.+++ ..++++|+|+++..++.+....... ++.+|+++...|+
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~~~~~-------~g~~vv~~~~~h~ 99 (381)
T PRK02948 34 LHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNYLAIQSLLNALPQ-------NKKHIITTPMEHA 99 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHHHHHHHHHHhccC-------CCCEEEECCcccH
Confidence 3444555667788889999999998654 3588999999998888776532111 3567888999999
Q ss_pred hHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 200 TFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 200 s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
++.... +..|+ +++.+|++++ +.+|+++|++.+.++ +.+|++++++|+||.+.|+++|.++|+++|
T Consensus 100 s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~ 168 (381)
T PRK02948 100 SIHSYFQSLESQGY---TVTEIPVDKS--GLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEIGALLKKYN 168 (381)
T ss_pred HHHHHHHHHHhCCC---EEEEEeeCCC--CCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHHHHHHHHcC
Confidence 876654 45577 9999998754 489999999988653 348999999999999999999999999999
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|||++++.+....+ ... ..+|++++++||+++ |.|+|+++++++..+. + .......
T Consensus 169 ~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~------~-~~~~~~~------- 227 (381)
T PRK02948 169 VLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIYG-PKGVGAVYINPQVRWK------P-VFPGTTH------- 227 (381)
T ss_pred CEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcCC-CCcEEEEEEcCCCCCC------C-cccCCCC-------
Confidence 99999988765432221 111 148999999999765 8899999987642110 0 0000000
Q ss_pred CCCcccCCC-CCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCC---ceEEEEEecCCCC
Q 010842 357 FKDWQVGTG-RRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRH---FALVCFRLNPYPH 429 (499)
Q Consensus 357 ~~~~~~~~s-r~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~---~~~v~f~~~~~~~ 429 (499)
...++.+ -.. ....+..+++.+ .+++++..++..++++++.+.|+++ ++++.. .+. ..++.|......
T Consensus 228 --~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~- 302 (381)
T PRK02948 228 --EKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE- 302 (381)
T ss_pred --CCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC-
Confidence 0001111 111 123334444433 2567888899999999999999988 554432 121 235666654322
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeee----E---------------CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTI----V---------------GGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~---------------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..++...|.++|+.+-.+.. + ....++|++++ +.+|++|+++++++|+++.
T Consensus 303 ---------~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~ 372 (381)
T PRK02948 303 ---------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIG 372 (381)
T ss_pred ---------HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence 34456667677754432221 1 12468999995 8999999999999999999
Q ss_pred HHHhccC
Q 010842 491 DRLFKGS 497 (499)
Q Consensus 491 ~~l~~~~ 497 (499)
+.+.+.-
T Consensus 373 ~~~~~~~ 379 (381)
T PRK02948 373 NQFYRGV 379 (381)
T ss_pred HHHhccc
Confidence 8887653
No 42
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=1.2e-25 Score=228.84 Aligned_cols=350 Identities=11% Similarity=0.019 Sum_probs=238.1
Q ss_pred ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI 171 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~ 171 (499)
.+-+.|++...+..+.+.+...+.. + .++...++.+++.+++++++|.+... ..+++++||.++..++.
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~ 78 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNED----H-RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALT 78 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCC----C-CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHH
Confidence 3446677777766666665443322 1 36778889999999999999996431 35888899988776665
Q ss_pred HHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE
Q 010842 172 AARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF 249 (499)
Q Consensus 172 ~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~ 249 (499)
...+ ++..|+++...|++. ...++..|+ +++.++.+.++ .+|+++|++++++++. .++.+
T Consensus 79 ~~~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~--~~~~~~l~~~l~~~~~--~~~k~ 140 (401)
T PLN02409 79 NTLS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWGQ--GADLDILKSKLRQDTN--HKIKA 140 (401)
T ss_pred hcCC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCCC--CCCHHHHHHHHhhCcC--CCccE
Confidence 4321 466788888889764 577888899 99999987643 5899999999986320 12448
Q ss_pred EEEecCCCcccccCChhHHHHH--HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842 250 LCATVGTTSTTAVDNVEPLAEV--ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV 327 (499)
Q Consensus 250 vv~t~gtt~~G~id~l~~I~~i--a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~ 327 (499)
|++++++|+||.+.|+++|+++ |+++|++++||++++.+....+- ..+ ++|.+++++|||+++|.|+|++++
T Consensus 141 v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~-----~~~-~~D~~~~s~~K~l~~P~G~G~l~~ 214 (401)
T PLN02409 141 VCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRM-----DEW-GVDVALTGSQKALSLPTGLGIVCA 214 (401)
T ss_pred EEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccc-----ccc-CccEEEEcCccccCcCCCcceeEE
Confidence 8999999999999999999999 99999999999998754432211 111 489999999999999999999998
Q ss_pred eCchhHHHhhcC--CccCCCCCCCCCCCcccCCCcc-c-CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 328 KQPGLLVKALST--DPEYLKNKPSESNSVVDFKDWQ-V-GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 328 r~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~-~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
+++. +.+.... .+.|+.... ..++...+ . ..+... ....+..+++.+...|++++.++..++++++.+.
T Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~ 288 (401)
T PLN02409 215 SPKA-LEASKTAKSPRVFFDWAD-----YLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLA 288 (401)
T ss_pred CHHH-HHHHhcCCCCCeecCHHH-----HHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 7653 3222211 112221000 00000000 0 001111 1234555666666789999999999999999999
Q ss_pred HhcCCCeEEEcCC---Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHH
Q 010842 403 VKSDPRFEIVVPR---HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDER 477 (499)
Q Consensus 403 L~~~~~~~~~~~~---~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~ 477 (499)
|++. +++++.+. .. .+++|++...- + ..++.+.+.++..+.+.++... ...++|++.+ .+++++
T Consensus 289 L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~-------~--~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~-g~~~~~ 357 (401)
T PLN02409 289 VEAW-GLKLCTKKPEWRSDTVTAVVVPEGI-------D--SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHL-GNVNEL 357 (401)
T ss_pred HHHc-CCeeccCChhhcccceEEEeCCCCC-------C--HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCC-CCCCHH
Confidence 9987 89988642 23 34556654211 1 2456666654444455544322 2357999998 578999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADRL 493 (499)
Q Consensus 478 di~~l~~~l~~~~~~l 493 (499)
|+..++++|.++..++
T Consensus 358 ~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 358 QLLGALAGVEMVLKDV 373 (401)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999987764
No 43
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=8e-25 Score=223.62 Aligned_cols=303 Identities=16% Similarity=0.153 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH--
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL-- 207 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~-- 207 (499)
.-+++.+++++++|.+.+ ..++++|||+|+..++.+......+ ++..|+++..+|+++..+++.
T Consensus 50 ~~~~~r~~ia~~~g~~~~-------~v~~~~g~t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~~ 115 (404)
T PRK14012 50 AVDIARNQIADLIGADPR-------EIVFTSGATESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQLE 115 (404)
T ss_pred HHHHHHHHHHHHcCcCcC-------eEEEeCCHHHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHHH
Confidence 344567789999998754 3689999999999888766432111 456788999999998766654
Q ss_pred -hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 208 -AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 208 -~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.|+ +++.|+++++ +.+|+++|+++|++++ .+|++++.+|++|.+.|+++|.++|+++|+++|+|+|++
T Consensus 116 ~~g~---~~~~v~~~~~--g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~ 184 (404)
T PRK14012 116 REGF---EVTYLDPQSN--GIIDLEKLEAAMRDDT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQS 184 (404)
T ss_pred hCCC---EEEEEccCCC--CcCCHHHHHHhcCCCC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchh
Confidence 488 9999998854 5899999999997654 389999999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
.+....+- . . ..+|++++++||++ +|.|+|+++++++... ...+.+ .+.... ..++.+.
T Consensus 185 ~g~~~~~~-~----~-~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~----~~~~~~-~g~~~~---------~~~~~gt 243 (404)
T PRK14012 185 VGKVPIDL-S----K-LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV----RLEAQM-HGGGHE---------RGMRSGT 243 (404)
T ss_pred cCCcccCc-c----c-CCCCEEEEehhhcc-CCCceEEEEEecCCCC----CCCcee-cCCCcc---------CCccCCC
Confidence 76543221 1 1 14899999999955 5789999999875321 111111 111000 0011111
Q ss_pred C-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcchhHHHH
Q 010842 367 R-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 367 ~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
. . ..+.+-.++... ..++.++.++..++++++.+.|++++++.++.++ ....++|...+ .
T Consensus 244 ~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~ 310 (404)
T PRK14012 244 LPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE------------G 310 (404)
T ss_pred cCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC------------H
Confidence 1 1 112222333333 3456778889999999999999999998876431 12234444422 1
Q ss_pred HHHHHHHHh----cCCEEEEeee---------E-----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNS----TGRVYLTHTI---------V-----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 440 ~~l~~~l~~----~g~~~~~~~~---------~-----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..+...|.. .|..+ .+.. + .....+|+++ ++.+|++|||+++++|+++.+.+
T Consensus 311 ~~~~~~l~~~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 311 ESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred HHHHHhCCCeEEEchhhh-CCCCCCCCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 223333321 12111 1110 0 1136799999 58899999999999999988765
No 44
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=1.1e-24 Score=222.80 Aligned_cols=353 Identities=11% Similarity=0.060 Sum_probs=223.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHcc----cCCcccccC-hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842 89 SPNFFAFFPATVSTAGFLGEMLCACFN----SVGFNWLAS-PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 163 (499)
+..||.+...++. |..+.+.+..+++ +....|..+ .....++.+..+ + +++|.+++ ..++|+|+|
T Consensus 27 ~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-------~v~~~~~~t 96 (406)
T TIGR01814 27 AVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-------EVVVMNTLT 96 (406)
T ss_pred CcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-------cEEEeCCch
Confidence 3467776655554 5555555554432 222122221 122334444333 5 88998654 358999999
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH----HHHHhCCCCCCe----EEeeCCCCCCCccCHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK----VCKLAGVSPANI----RALPTSVDANFSLSPQLLRR 235 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k----a~~~~G~g~~~v----~~v~~~~~~~~~~d~~~L~~ 235 (499)
+++..++...... +.++.+|+++...|.|... .++..|+ ++ +.++.+.+ +.+|++++++
T Consensus 97 ~~l~~~~~~~~~~--------~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~--g~~~~~~l~~ 163 (406)
T TIGR01814 97 INLHLLLASFYKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPREE--ETLRLEDILD 163 (406)
T ss_pred HHHHHHHHHhcCC--------cCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCCC--CccCHHHHHH
Confidence 9877766553110 1123468888899988444 4456687 76 45665543 4889999999
Q ss_pred HHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccc
Q 010842 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW 315 (499)
Q Consensus 236 ~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~ 315 (499)
.++.. ..++.+|++++.++.+|.+.|+++|+++||++|++++||++++.+....+- .. .++|.+++++|||
T Consensus 164 ~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-----~~-~gvD~~~~s~hK~ 234 (406)
T TIGR01814 164 TIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-----HD-WGVDFACWCTYKY 234 (406)
T ss_pred HHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-----cc-CCCCEEEEcCccc
Confidence 88642 123458999999999999999999999999999999999999887654321 11 1489999999999
Q ss_pred ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC-CC--CcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHH
Q 010842 316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE-SN--SVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIR 390 (499)
Q Consensus 316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~~--~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~ 390 (499)
++.|.| |+++++.+... ........|....... .. .........++.+.+ . ....+..+++.+...|++++.+
T Consensus 235 l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (406)
T TIGR01814 235 LNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK 312 (406)
T ss_pred cCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 976767 66666554321 1111111221111000 00 000000111112211 1 1234555666666678889999
Q ss_pred HHHHHHHHHHHHHhcC----CCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE
Q 010842 391 SDIRLAKMFEGFVKSD----PRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL 462 (499)
Q Consensus 391 ~~~~~a~~l~~~L~~~----~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~ 462 (499)
+..++++++.+.|++. ++++++.+. ..++++|.+. .. .+.+.++|.++|++ +. ..+.
T Consensus 313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~----------~~~~~~~L~~~gi~-v~---~~~~ 377 (406)
T TIGR01814 313 KSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP----------GKAVFQALIKRGVI-GD---KREP 377 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC----------HHHHHHHHHHCCEE-Ee---ccCC
Confidence 9999999999999875 468888642 2457888775 22 35677778777853 32 2233
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 463 YMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..+|+|+++.++|++||++++++|+++.
T Consensus 378 ~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 378 SVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 5799999667899999999999998763
No 45
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=1.5e-24 Score=221.45 Aligned_cols=340 Identities=13% Similarity=0.112 Sum_probs=223.8
Q ss_pred cccccCCCCCChHHHHHHHHHHHcccC----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNSV----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
.|+.+-..++.++. +.+.+...+... ...|..+....++.+++++.+++++|.+.. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 57776544444444 444444443211 122333344556677888889999998654 358888999887
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
...+.+..... .++..|+++...|++.. ..++..|+ +++.++++++ ++.+|+++|++++.+++
T Consensus 91 ~~~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~~- 157 (397)
T TIGR01976 91 FLLSRAISRRW--------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPRT- 157 (397)
T ss_pred HHHHHHHHhcC--------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCCc-
Confidence 65554432110 14567888999998754 55677899 9999998753 36899999999987544
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
.+|++++++|++|.+.|+++|+++|+++|+++++|++++.+....+ . .. .++|.+++++|||++ | .+
T Consensus 158 -----~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~~g-~-~~ 224 (397)
T TIGR01976 158 -----RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-V----QA-TGADFLTCSAYKFFG-P-HM 224 (397)
T ss_pred -----eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-H----HH-cCCCEEEEechhhcC-C-ce
Confidence 3899999999999999999999999999999999999865432211 1 11 148999999999986 4 38
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC-CCCC-cHHHHHHHHHhcHH--------------HHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG-RRFK-SLRLWMVLRSYGVL--------------NLQ 386 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~~-al~~~~~l~~~g~~--------------g~~ 386 (499)
|+++++++. +.........+..... ...++.| +.+. .+.+..+++.+... +++
T Consensus 225 G~l~~~~~~-~~~l~~~~~~~~~~~~----------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~ 293 (397)
T TIGR01976 225 GILWGRPEL-LMNLPPYKLTFSYDTG----------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQ 293 (397)
T ss_pred EEEEEcHHH-HhhCCCccccCccCCC----------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHH
Confidence 888887542 2111111111111110 0011222 2222 34455566555322 367
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---
Q 010842 387 SHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--- 459 (499)
Q Consensus 387 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--- 459 (499)
+..++..++++++.+.|+++++++++.+ +..+++.|...... ..++.++|.++|+.+-.....
T Consensus 294 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~ 363 (397)
T TIGR01976 294 AIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP----------PQRVVRRLADQGIDAWAGHFYAVR 363 (397)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC----------HHHHHHHHHHCCeEEEeCccchHH
Confidence 7788888999999999999988998764 25677877764322 356778888888654332111
Q ss_pred --------CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 460 --------GGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 460 --------~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
....++|+|++ +.+|++||++++++|
T Consensus 364 ~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l 397 (397)
T TIGR01976 364 LLRRLGLNDEGGVVRVGLA-HYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHhCCCCCCCeEEEEee-ccCCHHHHHHHHHhC
Confidence 12357999995 889999999999864
No 46
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=5.5e-24 Score=214.30 Aligned_cols=312 Identities=15% Similarity=0.140 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
|...++|+. +++++|.+ . .++++|+|+++..++.+... ++..|+++..+|++...+
T Consensus 44 ~~~~~l~~~----la~~~g~~-~--------i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~ 99 (361)
T cd06452 44 PPIKDFHHD----LAEFLGMD-E--------ARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVA 99 (361)
T ss_pred chHHHHHHH----HHHHcCCc-e--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHH
Confidence 444455555 99999983 2 48999999998887776532 466788899999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
++..|+ +++.||++.+++|.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|+++|+|+
T Consensus 100 ~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~ 176 (361)
T cd06452 100 AERAGL---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG 176 (361)
T ss_pred HHhcCC---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC
Confidence 999999 999999987655799999999999764322 2346688899999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc-c
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ-V 362 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~ 362 (499)
||+.+....+. . .. .+|.++.++||+++.|.++|+++++++ ...+..... .++... ..+ .
T Consensus 177 a~~~g~~~~~~---~--~~-~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~-~~~~~~-----------~~~~~ 237 (361)
T cd06452 177 AYTVGRMPVSG---K--EL-GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTS-QMFKIK-----------EVELL 237 (361)
T ss_pred CcccCCcCCCH---H--Hc-CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhccc-cccccc-----------eeeee
Confidence 99754332111 1 11 379999999999998888998888653 332222222 111100 000 1
Q ss_pred CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCCcchhHHHH
Q 010842 363 GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 363 ~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
..+.+. .+..++.++..+ .+.+ +..++..++++++++.|+++|+++++. +...+++.|+...... .........
T Consensus 238 ~~~~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~-~~~~~~~~~ 314 (361)
T cd06452 238 GCTLRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDE-IAKKHKRRG 314 (361)
T ss_pred ccccCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcch-hhhhccccc
Confidence 111111 233444455433 2333 445555677899999999999999874 3345666666532100 000000012
Q ss_pred HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++.+.|.++|+... ......++|++++ ..+++|++.++++|+++.
T Consensus 315 ~~~~~~L~~~gI~~~---~~~~~~~~ri~~~--g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 315 YFLYSELKKRGIHGI---KPGLTRYFKLSTY--GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hhHHHHHHHcCceEE---cCCCceEEEEEec--CCCHHHHHHHHHHHHHHh
Confidence 257788888886521 1122347899884 268999999999998754
No 47
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.94 E-value=1.2e-24 Score=211.10 Aligned_cols=352 Identities=17% Similarity=0.143 Sum_probs=222.3
Q ss_pred CCCCccccccCCCCCChHHHHHHHH---HHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC
Q 010842 86 HWLSPNFFAFFPATVSTAGFLGEML---CACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT 161 (499)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l---~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g 161 (499)
+...|-|+.....++..|.++..+. ..++ |++.. +.....-..+|. .++.+++++|.++. +.+||+|
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~-aR~~VAklInAd~~-------dIiFts~ 110 (428)
T KOG1549|consen 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEA-AREQVAKLINADPS-------DIVFTSG 110 (428)
T ss_pred CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHH-HHHHHHHHhCCCCC-------cEEEeCC
Confidence 3457788888777777776665443 3333 33322 111122233444 57889999999876 4799999
Q ss_pred hHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHH
Q 010842 162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVE 238 (499)
Q Consensus 162 gt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~ 238 (499)
+||||.+++...-..... + .+-.|++...+|.++.++++.+ |+ .++.||+..+ +..|++.+++.|+
T Consensus 111 ATEs~Nlvl~~v~~~~~~-----~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~~--~~~d~~~~~~~i~ 179 (428)
T KOG1549|consen 111 ATESNNLVLKGVARFFGD-----K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVEDS--GLVDISKLREAIR 179 (428)
T ss_pred chHHHHHHHHHhhccccc-----c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCcc--ccccHHHHHHhcC
Confidence 999998887754321110 1 1227888899999999888765 77 9999999854 5999999999999
Q ss_pred HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS 318 (499)
Q Consensus 239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 318 (499)
++++ +|.+.+.++..|.+.|++||+++|+++|+.+|+|+|++.+....+- +.+ .+|.++++.|||++.
T Consensus 180 ~~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-----~el-n~D~~s~s~HK~ygp 247 (428)
T KOG1549|consen 180 SKTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-----QEL-NADFLSISAHKIYGP 247 (428)
T ss_pred CCce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-----HHc-CchheeeecccccCC
Confidence 9876 8999999999999999999999999999999999999987655432 111 399999999999996
Q ss_pred CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC--cHHHHHHHHHhc--HHHHHHHHHHHHH
Q 010842 319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK--SLRLWMVLRSYG--VLNLQSHIRSDIR 394 (499)
Q Consensus 319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~~g--~~g~~~~~~~~~~ 394 (499)
|. +|++++|... ..+...|.+..+... . ++.-+.+.. ++.+-.+.+..- ....+.++. +
T Consensus 248 ~~-iGaLYvr~~~---~~~~~~p~~~GGgq~-r---------~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~ 310 (428)
T KOG1549|consen 248 PG-IGALYVRRKR---PRLRVEPPLSGGGQE-R---------GLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---R 310 (428)
T ss_pred Cc-ceEEEEccCC---CcccccCcccCCccc-c---------ccccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---H
Confidence 65 9999999722 122344555444321 1 111122211 222333333331 122233332 3
Q ss_pred HHHHHHHHHh-cCCCeEEEcC-----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-----------
Q 010842 395 LAKMFEGFVK-SDPRFEIVVP-----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT----------- 457 (499)
Q Consensus 395 ~a~~l~~~L~-~~~~~~~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----------- 457 (499)
+...+...+. ..++..+... +.+..+.|.+.... .+...+.+.-...|..+.+..
T Consensus 311 ~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G 382 (428)
T KOG1549|consen 311 LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGE--------SLLMDLKDVALSSGSACTSASLEPSYVLRAIG 382 (428)
T ss_pred HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCc--------chhhhhhhhhhcccchhhcCCCCcchhhhhcC
Confidence 4444544443 3555555443 22333444422110 011111222222232221111
Q ss_pred --eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 458 --IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 458 --~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
....+..+|++++ .+++++|++++++.+++.++.+..
T Consensus 383 ~~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 383 VDEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred cchhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHhccc
Confidence 1123578999996 889999999999999998876543
No 48
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=3e-24 Score=216.51 Aligned_cols=345 Identities=11% Similarity=0.081 Sum_probs=225.9
Q ss_pred cccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842 93 FAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIA 172 (499)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ 172 (499)
+=+.|++......+-+.+..-+ .++ .+....+-+++++.+++++|.++.. ...++|+|||+|+..++..
T Consensus 5 ~l~~pgp~~~~~~v~~~~~~~~----~~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~ 73 (363)
T TIGR02326 5 LLLTPGPLTTSRTVKEAMLFDW----CTW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGS 73 (363)
T ss_pred eEecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHh
Confidence 3356766666555544433322 122 3455666677889999999996531 1258999999998877765
Q ss_pred HHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 173 ARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
.... ++.+|+++...|.+ +.+.++..|+ +++.||+++++ .+|+++|++++.++++ +.+|.
T Consensus 74 l~~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~~~--~~d~~~l~~~l~~~~~----~~~v~ 134 (363)
T TIGR02326 74 AVPK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGEVE--PPDVVEVEAILAADPA----ITHIA 134 (363)
T ss_pred cCCC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCCC--CCCHHHHHHHHhhCCC----ccEEE
Confidence 5321 23445555555555 4677888999 99999988654 8999999999875321 23678
Q ss_pred EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842 252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~ 331 (499)
+++++|+||.+.|+++|+++||++|++++||++++.+....+ +..+ .+|.++.++|||+++|.|.|+++++++.
T Consensus 135 ~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~ 208 (363)
T TIGR02326 135 LVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVIARQAE 208 (363)
T ss_pred EEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEEECHHH
Confidence 888899999999999999999999999999998865433221 1111 3899999999999999999999997753
Q ss_pred hHHHhhcCCcc-CCCCCCCCCCCcccCCCcccCCCCCCC-----cHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHh
Q 010842 332 LLVKALSTDPE-YLKNKPSESNSVVDFKDWQVGTGRRFK-----SLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 332 ~l~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~ 404 (499)
+.+......+ |+.... .+....+ ....++|. ...+..+++.+..+ +++++.++..++++++.+.|+
T Consensus 209 -~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~ 281 (363)
T TIGR02326 209 -LAACKGNARSLSLDLYD-----QWRCMED-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMR 281 (363)
T ss_pred -HHHhhcCCCceeecHHH-----HHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 2221111111 100000 0000000 00112221 23455566666555 488888999999999999998
Q ss_pred cCCCeEEEcCC--CceE-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842 405 SDPRFEIVVPR--HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 405 ~~~~~~~~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~ 481 (499)
+. +++++.++ ..++ ++|++.+.. ......+.+.|.++|+.+..+... +..++|++++ ..++.+|+++
T Consensus 282 ~~-g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~L~~~gi~v~~g~~~-~~~~iRi~~~-~~~~~edv~~ 351 (363)
T TIGR02326 282 AL-GFEPLLDDEIQSPIITSFYSPEDP-------DYRFADFYQRLKEQGFVIYPGKVS-QVDCFRIGNI-GEVDAADITR 351 (363)
T ss_pred Hc-CCeeccCcccCCceEEEEECCCCC-------CCCHHHHHHHHHHCCEEEECCcCC-CCCEEEEecC-CCCCHHHHHH
Confidence 87 78876543 3443 456654320 001346777787778654333222 3467999985 5689999999
Q ss_pred HHHHHHHHH
Q 010842 482 AWELIMEGA 490 (499)
Q Consensus 482 l~~~l~~~~ 490 (499)
++++|+++.
T Consensus 352 ~l~~l~~~l 360 (363)
T TIGR02326 352 LLTAIGKAM 360 (363)
T ss_pred HHHHHHHHh
Confidence 999998763
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=8.8e-23 Score=205.95 Aligned_cols=309 Identities=14% Similarity=0.133 Sum_probs=207.4
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
++.+.+++++|.+.. .+++||++++..++.+... ++..|+++...|++...+++..|+
T Consensus 55 ~~~e~lA~~~g~~~~---------~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~-- 112 (370)
T TIGR02539 55 DFLEDLAEFLGMDEA---------RVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL-- 112 (370)
T ss_pred HHHHHHHHHhCCCce---------EEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence 344559999999764 7789999998877766532 566788899999999899999999
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~ 291 (499)
+++.+|.+.+.+|.+|+++|++++.+.++. +..+.+|+++++++++|.+.|+++|+++|+++|++++||+||+.+...
T Consensus 113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 999999875445899999999999764332 124568888999999999999999999999999999999999875321
Q ss_pred CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc-cCCCCCCCCCCCcccCCCcccCCCCCC-C
Q 010842 292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP-EYLKNKPSESNSVVDFKDWQVGTGRRF-K 369 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~-~ 369 (499)
.+ .. . ..+|.++.++|||++.+.++|+++.++. .. +.+.... +|..... . .+..+... .
T Consensus 192 ~~-~~----~-~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~-------~----~~~~~~~~~~ 252 (370)
T TIGR02539 192 VS-AK----E-IGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEV-------E----LLGCTSRGAP 252 (370)
T ss_pred CC-HH----H-cCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCcccee-------e----eecccccccH
Confidence 11 11 1 1389999999999987777898887653 22 3332222 2211110 0 01111111 2
Q ss_pred cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
+..++.++... .+.++ ..++..++++++++.|+++ +++++ .++..+++.+++..... .....+.....+.++|.
T Consensus 253 ~~~~~~al~~~-~~~l~-~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~-~~~~~~~~~~~~~~~L~ 328 (370)
T TIGR02539 253 IVTMMASFPHV-VERVK-RWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE-IAQKHKRRGYFLYEELK 328 (370)
T ss_pred HHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-HhhhhccccHHHHHHHH
Confidence 22333333221 22222 2344556678999999998 78875 35667778776532100 00000112346788888
Q ss_pred hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
++|+..+.+ ....++|++++ ..|++|+++++++|+++.++
T Consensus 329 e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 329 KRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 889642222 22458999984 35999999999999988765
No 50
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1.5e-23 Score=210.73 Aligned_cols=342 Identities=15% Similarity=0.126 Sum_probs=223.1
Q ss_pred cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
|.|++..++..+.+.+...++. | .+....+..++++.+++++|.++.. -..++++|||+++..++....
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhcc
Confidence 4566666666666666654432 2 2233466777888899999997641 124689999999888877653
Q ss_pred HHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842 175 DRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253 (499)
Q Consensus 175 ~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t 253 (499)
.. ++.+++++...|.+ +..+++..|+ +++.++.+.+ +.+|+++|++.+++++ .+.+|+.+
T Consensus 72 ~~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~ 132 (355)
T TIGR03301 72 PR----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSEY--EPPDLNRIEEALAADP----DITHVATV 132 (355)
T ss_pred CC----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCCC--CCCCHHHHHHHHHhCC----CceEEEEE
Confidence 21 23345455444444 5677888999 9999998753 4899999999987532 23467788
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+++|++|.+.|+++|+++|++||+++++|++++.+....+ +... .+|+++.++|||+++|.|+|+++++++. +
T Consensus 133 ~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~~-~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~ 205 (355)
T TIGR03301 133 HHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEEL-DVDALIASANKCLEGVPGFGFVIARRDL-L 205 (355)
T ss_pred ecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhhc-CccEEEecCCcccccCCceeEEEECHHH-H
Confidence 8999999999999999999999999999987754322111 1111 4899999999999888899999987643 3
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-----cHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-----SLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~ 407 (499)
........++..+... ...+. .-....++. ...+..+++.+..+| +++..++..++++++.+.|++.
T Consensus 206 ~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~- 278 (355)
T TIGR03301 206 EASAGNARSLYLDLYD----QWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL- 278 (355)
T ss_pred HHhhCCCCCceeeHHH----HHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence 2221111111111000 00000 000111111 133455666665565 8888899999999999999887
Q ss_pred CeEEEcCCC--ce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 408 RFEIVVPRH--FA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 408 ~~~~~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
+++++.++. .+ +++|++++.. .....++.++|.++|..+ .+.......++|+++. ..++++|++++++
T Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~i-~~~~~~~~~~iRis~~-~~~~~~~i~~~~~ 349 (355)
T TIGR03301 279 GFQPLLPERWQSPIIVSFLYPDDP-------DFDFDDFYQELKERGFVI-YPGKLTLADTFRIGTI-GEIDAADIERLLE 349 (355)
T ss_pred CCeeecCCCCCCCcEEEEECCCCC-------cchHHHHHHHHHHCCEEE-ECCccccccEEEEecC-CCCCHHHHHHHHH
Confidence 788765432 22 3556654311 111356778888888654 3332122368999984 6789999999999
Q ss_pred HHHHH
Q 010842 485 LIMEG 489 (499)
Q Consensus 485 ~l~~~ 489 (499)
.|+++
T Consensus 350 ~l~~~ 354 (355)
T TIGR03301 350 AIKDA 354 (355)
T ss_pred HHHhh
Confidence 99864
No 51
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=5.4e-24 Score=213.80 Aligned_cols=274 Identities=13% Similarity=0.084 Sum_probs=190.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+.....+.+++++++++++|.+.+ ..++|+|+|+|+..++.+....... ..+..|+++...|+++..
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~~~~l~~l~~~~~~------~g~~~vi~~~~~~~s~~~ 103 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESNNLAILGLARAGEQ------KGKKHIITSAIEHPAVLE 103 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccc------CCCCeeeEcccccHHHHH
Confidence 334456677889999999999754 3699999999988887765432100 022678889999998766
Q ss_pred HH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 204 VC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 204 a~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.. +..|+ +++.||++++ +.+|+++|++.++++ +.+|++++++|++|.+.|+++|+++|+++|+|+|
T Consensus 104 ~~~~~~~~G~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~i 172 (353)
T TIGR03235 104 PIRALERNGF---TVTYLPVDES--GRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFH 172 (353)
T ss_pred HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEE
Confidence 54 34577 9999998864 489999999988643 3488899999999999999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
||++++.+....+-. ...+|++++++|||+ +|.|+|+++++++.... ....+.+..... ..
T Consensus 173 vD~a~~~g~~~~~~~------~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~--~~~~~~~~~~~~----------~~ 233 (353)
T TIGR03235 173 VDAAQVVGKITVDLS------ADRIDLISCSGHKIY-GPKGIGALVIRKRGKPK--APLKPIMFGGGQ----------ER 233 (353)
T ss_pred EEchhhcCCcccccc------ccCCCEEEeehhhcC-CCCceEEEEEccCcccc--cccCceeeCCCC----------cC
Confidence 999988765433211 124999999999995 68899999999763211 111221211110 00
Q ss_pred ccCC-CCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchh
Q 010842 361 QVGT-GRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 361 ~~~~-sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~ 435 (499)
..+. +... ..+.+..+++.+ .++.+++.++..++++++++.|++ +|++++.++. ..+++|.+....
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~~------- 304 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGVN------- 304 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCcC-------
Confidence 1111 1111 123445555554 357888899999999999999988 7999886432 456777664322
Q ss_pred HHHHHHHHHHHHhcCCEE
Q 010842 436 EMLNRKLLDWVNSTGRVY 453 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~ 453 (499)
.+.+.+.|.+ ++.+
T Consensus 305 ---~~~v~~~L~~-~i~v 318 (353)
T TIGR03235 305 ---SEALIVNLRA-DAAV 318 (353)
T ss_pred ---HHHHHHHHhC-CeEE
Confidence 3556677744 5433
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=5.4e-23 Score=207.78 Aligned_cols=345 Identities=14% Similarity=0.090 Sum_probs=224.9
Q ss_pred cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
+.|++..+...+.+.+...+ ..| ++.......++.+.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 55666655555544443322 222 3445567778888899999986431 124689999999888777653
Q ss_pred HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
. ++..+++....++.. .+.++..|+ +++.||.+++ +.+|+++|+++++++.+ +.+|.+
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGED--EPPDAAEVEAALAADPR----ITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCCC--CCCCHHHHHHHHHhCCC----CcEEEE
Confidence 2 334455555555543 578888999 9999998754 48999999999875321 236788
Q ss_pred ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842 253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL 332 (499)
Q Consensus 253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~ 332 (499)
++++|++|.+.|+++|+++|+++|++++||++++.+....+ +... .+|.+++++|||+++|.|.|+++++++.
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-----~~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~~- 210 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-----IAEL-GIDALISSANKCIEGVPGFGFVIARRSE- 210 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccc-CceEEEecCccccccCCCceEEEECHHH-
Confidence 99999999999999999999999999999987644322111 1111 3899999999999999999999997643
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcC
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
+........+|..+... ...+.. -...+++ ....+..++..+..+ ++++..++..++++++.+.|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (368)
T PRK13479 211 LEACKGNSRSLSLDLYD----QWAYME--KTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL 284 (368)
T ss_pred HHHhhcCCCCeeecHHH----HHhhhc--ccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 22221111121111000 000000 0011111 123455666665444 47888899999999999999988
Q ss_pred CCeEEEcCCC--c-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842 407 PRFEIVVPRH--F-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 407 ~~~~~~~~~~--~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
+++++.++. . .+++|.+.... .....++.++|.++|+++ .+.......++|++++ ..++++|+++++
T Consensus 285 -g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~L~~~gi~v-~~g~~~~~~~iRis~~-~~~t~edi~~~l 354 (368)
T PRK13479 285 -GFEPLLDAEIQSPIIVTFHAPADP-------AYDFKEFYERLKEQGFVI-YPGKLTQVDTFRIGCI-GDVDAADIRRLV 354 (368)
T ss_pred -CCcccCCchhcCceEEEEECCCCC-------CcCHHHHHHHHHHCCEEE-ecCCCCCCCEEEEecC-CCCCHHHHHHHH
Confidence 788764432 2 24666654321 001356788888888654 3322222357999875 568999999999
Q ss_pred HHHHHHHHHH
Q 010842 484 ELIMEGADRL 493 (499)
Q Consensus 484 ~~l~~~~~~l 493 (499)
++|+++.+++
T Consensus 355 ~~L~~~l~~~ 364 (368)
T PRK13479 355 AAIAEALYWM 364 (368)
T ss_pred HHHHHHHHHc
Confidence 9999988765
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.4e-22 Score=204.02 Aligned_cols=345 Identities=14% Similarity=0.103 Sum_probs=242.8
Q ss_pred cccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842 93 FAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIA 172 (499)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ 172 (499)
++.-.++...|..+.+.+...++.....|....+..+|.+++.+++.+.+|..... ....++|+|+++|++.++.+
T Consensus 33 l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 33 LSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHH
Confidence 33333344556666666666555432266688899999999999999999853221 01379999999999999988
Q ss_pred HHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 173 ARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
..+ ++..|+++++.+.++.....++|. .++.||++.. .+|.+|+++|+++++++++ +|+
T Consensus 109 ~~~-----------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ 168 (393)
T COG0436 109 LLN-----------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AII 168 (393)
T ss_pred hcC-----------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EEE
Confidence 765 677899999999999999999999 9999998653 3699999999999999776 899
Q ss_pred EecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCc-eeEe-cccccccCC-CcceEE
Q 010842 252 ATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD-SFSF-SPHKWLLSY-LDCCCL 325 (499)
Q Consensus 252 ~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aD-si~~-~~hK~l~~p-~~~g~l 325 (499)
++.|+||||++ +.+++|+++|++||+|+++|.+|....+....+...+.--...| .|++ +..|.++.+ .-+|++
T Consensus 169 ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 169 LNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred EeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 99999999999 55899999999999999999999887553211222221111112 4444 678998755 668998
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEG 401 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~ 401 (499)
...++... +.+..-..|+... ...+...++..++. .+.++.+.+...++++.+.+
T Consensus 249 v~~~~~l~-~~~~~~~~~~~~~--------------------~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~ 307 (393)
T COG0436 249 VGPPEELI-AALRKLKSYLTSC--------------------APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVE 307 (393)
T ss_pred ecChHHHH-HHHHHHHHhcccC--------------------CCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 88754332 2222111222111 12344455555553 23566666788899999999
Q ss_pred HHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eEC---CEEEEEEeccCCCCcHH
Q 010842 402 FVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IVG---GLYMLRFAVGASLTDER 477 (499)
Q Consensus 402 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~---g~~~lRi~~~~~~~t~~ 477 (499)
.|.+++++++..+|......|--.+.. ....+++++|.++..+.+.|+ .++ |.+++|++++ ++.+
T Consensus 308 ~l~~~~g~~~~~~p~Ga~Y~~~~i~~~--------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~---~~~~ 376 (393)
T COG0436 308 ALNEIGGLSVVKPPEGAFYLFPKIPEL--------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA---TSEE 376 (393)
T ss_pred HHHhcCCeeeccCCCeeEEEEeecCCC--------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe---cCHH
Confidence 999999999987676666666433321 114566666666655555544 343 4479999997 4558
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADRL 493 (499)
Q Consensus 478 di~~l~~~l~~~~~~l 493 (499)
++++.++.+.+..+.+
T Consensus 377 ~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 377 TLEEALRRLARFLAEY 392 (393)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999998877643
No 54
>PLN02721 threonine aldolase
Probab=99.92 E-value=8.4e-23 Score=205.19 Aligned_cols=305 Identities=15% Similarity=0.153 Sum_probs=195.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
.+|...++|++ +++++|.+. ++++++||++++.++.+.... ++..|++++.+|+++.
T Consensus 38 ~~~~~~~l~~~----la~~~~~~~---------~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEEE----MAKIFGKEA---------ALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHHH----HHHHhCCce---------eEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 35666677777 777788754 388888999988777765321 4567889999998877
Q ss_pred H---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC-CccEEEEEec-CCCcccccCC---hhHHHHHHHH
Q 010842 203 K---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG-LVPLFLCATV-GTTSTTAVDN---VEPLAEVANE 274 (499)
Q Consensus 203 k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~vv~t~-gtt~~G~id~---l~~I~~ia~~ 274 (499)
+ .+...|+ +++.+|.+++ +.+|+++|++.|++....+ ..+.+|+.+. .++++|.+-| +++|+++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 7 4677888 9999998754 5899999999997431111 1234566655 4667888744 8899999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+|+|+|+|+||.......... ........+|+++++.|||++.|. |.+++.+++... .+.....+...
T Consensus 170 ~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~-~~~~~~~~~~~-------- 237 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGV-PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIR-KAKRLRKTLGG-------- 237 (353)
T ss_pred cCCEEEEEchhhhcchhhhCC-CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHH-hHHHHHHhcCC--------
Confidence 999999999875322111111 111112358999999999998774 444444544332 11110000000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EcCCCceEEEEEecCCCCCCcc
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI-VVPRHFALVCFRLNPYPHSGSA 433 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~~~~~v~f~~~~~~~~~~~ 433 (499)
+.+.......+++..+ +...+.+++..++++++.+.|++++++++ +.++..+++.+++....
T Consensus 238 ----------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (353)
T PLN02721 238 ----------GMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----- 300 (353)
T ss_pred ----------CeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence 0000111111122221 22233445556788899999999988875 55666677777765310
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
......+.++|.++|+.+... +..++|+++ +..++++|+++++++|++++.
T Consensus 301 --~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 --RITAEKLCKSLEEHGVLLMPG----NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred --cccHHHHHHHHHhCCcEEecC----CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence 012456788888888665432 346899998 478899999999999998764
No 55
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.1e-22 Score=198.64 Aligned_cols=318 Identities=16% Similarity=0.125 Sum_probs=228.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
.+|.+..+-+++++.+..+|+.+... --+++++||.|.-.++..... ++..|++....-|.
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~R 94 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGER 94 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHHH
Confidence 46888999999999999999987421 237788898776665554432 45566666666554
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
+.+.++.+|. +++.+.+.... .+|+++++++|+++.. +-+|.++|+.|+||...|+++|+++|++||..++
T Consensus 95 ~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~i 165 (383)
T COG0075 95 FAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLI 165 (383)
T ss_pred HHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEEE
Confidence 8899999999 99999988654 8999999999985432 3389999999999999999999999999999999
Q ss_pred eeccc--cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc--CCCCCCCCCCCccc
Q 010842 281 VDAAY--AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE--YLKNKPSESNSVVD 356 (499)
Q Consensus 281 vD~A~--g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~--yl~~~~~~~~~~~~ 356 (499)
||+.- |+--+..+++ ++|.+...+||++..|.|.+++.++++.. ........+ |+.-.. ...
T Consensus 166 VDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~-e~~~~~~~~~~ylDL~~-----~~~ 231 (383)
T COG0075 166 VDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERAL-EAIEERKHPSFYLDLKK-----WLK 231 (383)
T ss_pred EEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHH-HHHhcCCCCceeecHHH-----HHH
Confidence 99864 4433333333 39999999999999999999999988753 233333222 332110 001
Q ss_pred CCCcccCCCCCCC-----cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCC
Q 010842 357 FKDWQVGTGRRFK-----SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPH 429 (499)
Q Consensus 357 ~~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~ 429 (499)
+.+. ....++. -..+..+++.+-.+|++++++|+.++++++++.++++ |++++.++ .+++++....|.+
T Consensus 232 ~~~~--~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g- 307 (383)
T COG0075 232 YMEK--KGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG- 307 (383)
T ss_pred HHhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC-
Confidence 1100 0222332 2466777888888999999999999999999999998 89988733 3444444344432
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++ .+++...+.+++.+.+++.. +.| .++||..|. ..+.+|+..++++|..+..++
T Consensus 308 -----~~--~~~~~~~~~~~~g~~i~gg~~~l~g-kifRIGhMG-~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 308 -----VD--DKKVRRALLKEYGVEIAGGQGPLKG-KIFRIGHMG-NVRPEDVLAALAALEAALREL 364 (383)
T ss_pred -----CC--cHHHHHHHHHhCCEEecccccccCc-cEEEEecCc-cCCHHHHHHHHHHHHHHHHHc
Confidence 11 22333355555555555433 334 469999996 899999999999999988776
No 56
>PRK07179 hypothetical protein; Provisional
Probab=99.91 E-value=3.1e-22 Score=204.79 Aligned_cols=331 Identities=13% Similarity=0.077 Sum_probs=213.5
Q ss_pred CCCCccccccCCCCCChHHHHHHHHHHHcccC--Ccccc-cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh
Q 010842 86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSV--GFNWL-ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT 162 (499)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~-~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg 162 (499)
.+.+-.|+|... .+.....+.+.+....+.. ...+. ..+...++|++ +++++|.+.. ++++||
T Consensus 58 ~~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~----la~~~g~~~~---------~~~~sG 123 (407)
T PRK07179 58 ILQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKK----LAAFTGFESC---------LLCQSG 123 (407)
T ss_pred EeecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHH----HHHHhCCCcE---------EEECCH
Confidence 345566777662 2223333334443322111 11121 22455666654 8888888653 889999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
++||..++.+... ++..|+++...|.++...++..|. .++.++ ..|+++|++++++.
T Consensus 124 ~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~-- 180 (407)
T PRK07179 124 WAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFR-------HNDVDHLRRQIERH-- 180 (407)
T ss_pred HHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHHHHCCC---eEEEec-------CCCHHHHHHHHHhc--
Confidence 9999988876532 455788899999999998888888 665443 35999999998652
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCC-CCCceeEecccccccCC
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSY 319 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p 319 (499)
.+.+|++..+++++|.+.|+++|.++|+++|+++|+|++|+.+... +..+... .++ ..+|.++.+.||+++.
T Consensus 181 ---~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~- 255 (407)
T PRK07179 181 ---GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAG- 255 (407)
T ss_pred ---CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhc-
Confidence 1347778889999999999999999999999999999999754321 1111111 122 3579999999999974
Q ss_pred CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842 320 LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAK 397 (499)
Q Consensus 320 ~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~ 397 (499)
.+|+++.++. +.+.+.. ..++.... +-.. .+..+.++++.+ +...+..++..++++
T Consensus 256 -~~G~l~~~~~--~~~~~~~~~~~~~~~~-----------------t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~ 313 (407)
T PRK07179 256 -RAGIITCPRE--LAEYVPFVSYPAIFSS-----------------TLLPHEIAGLEATLEVI--ESADDRRARLHANAR 313 (407)
T ss_pred -cCeEEEeCHH--HHHHHHHhCcCeeeCC-----------------CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHH
Confidence 3788877643 2222211 11111110 1000 112233344443 223456788889999
Q ss_pred HHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---EEeeeECCEEEEEEeccCCCC
Q 010842 398 MFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---LTHTIVGGLYMLRFAVGASLT 474 (499)
Q Consensus 398 ~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lRi~~~~~~~ 474 (499)
++.+.|+++ ++++. ...+++.+.+.. ......+.+.|.++|+.. ..+....+..++|+++. ..+
T Consensus 314 ~l~~~L~~~-g~~v~--~~~~i~~l~~~~---------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~-~~~ 380 (407)
T PRK07179 314 FLREGLSEL-GYNIR--SESQIIALETGS---------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLN-ADL 380 (407)
T ss_pred HHHHHHHHc-CCCCC--CCCCEEEEEeCC---------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEEC-CCC
Confidence 999999987 77765 234667666532 112456777888888641 22222234578999995 889
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGADRL 493 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~~l 493 (499)
|++||++++++|+++.++.
T Consensus 381 t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 381 TASDLDRVLEVCREARDEV 399 (407)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987764
No 57
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.91 E-value=7.2e-22 Score=201.04 Aligned_cols=331 Identities=11% Similarity=0.131 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
+..+.+.+...+......|...++...+++++.+++.+.+|.+-+. ...++|+|+++|+..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 115 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV-----DNVIVTAGAYEATYLAFESLLE------- 115 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCChHHHHHHHHHHhcC-------
Confidence 3455666665554433456666778999999999998887753211 1468999999998877765532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++...+...|+ +++.+|++.+++|.+|+++|++.++++++ +|+++.++|+||.+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~------~v~i~~p~NPtG~~ 182 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRTR------MIVINYPNNPTGAT 182 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccccE------EEEEeCCCCCCCcC
Confidence 466788899999999999999999 99999998766689999999999876443 67888999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
-| +++|+++|+++++++++|++|+.+.................+.++.+.+|.++.| ..+|+++..+ +...+ +.
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~~-~~ 260 (391)
T PRK08361 183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIKD-MI 260 (391)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHHH-HH
Confidence 88 8899999999999999999997664321111111111112467889999998765 2378888754 32322 21
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--H--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--V--LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~--~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
....+.... ...+...++...+. . +.+++..++..++++.+.+.|++.+++++. +
T Consensus 261 ~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~ 319 (391)
T PRK08361 261 KLHAYIIGN--------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-E 319 (391)
T ss_pred HHHhhhccC--------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-C
Confidence 111111100 01233333333332 1 346677777788888899999988888765 4
Q ss_pred CCceEEE-EEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 415 RHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 415 ~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
|+.+.+. .++.+.. . ...++.+.+.+ .|+.+..+..+. +..++|++++ .++++++..++.|+++.
T Consensus 320 p~g~~~~~~~l~~~~------~--~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~l 388 (391)
T PRK08361 320 PKGAFYVFANIDETG------M--SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA---TSKEKLIEAMERMEKAL 388 (391)
T ss_pred CCEEEEEEEECCCCC------C--CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 4444433 3554211 0 13455666654 565444433332 3478999996 35778999999888876
Q ss_pred HH
Q 010842 491 DR 492 (499)
Q Consensus 491 ~~ 492 (499)
++
T Consensus 389 ~~ 390 (391)
T PRK08361 389 EE 390 (391)
T ss_pred hc
Confidence 54
No 58
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=209.21 Aligned_cols=311 Identities=12% Similarity=0.076 Sum_probs=202.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc---CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ---NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t---~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
........+|..+++.++++||.+.+. -.++ +|||+||+.++.+... ++..|+++...|
T Consensus 73 ~g~~~~~~iE~~ar~~~a~lf~a~~~~-------~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~eh 134 (452)
T PTZ00094 73 GGNEVVDKIENLCQKRALEAFGLDPEE-------WGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPS 134 (452)
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCccc-------ceeecCCCchHHHHHHHHHHhcC-----------CCCEEEeccccc
Confidence 334456788877889999999997542 1344 7899999988876632 466788888889
Q ss_pred hhHHHHHHHh--------CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842 199 STFAKVCKLA--------GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE 270 (499)
Q Consensus 199 ~s~~ka~~~~--------G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ 270 (499)
.+....+..+ |.+- .+..++++.+ +.+|+++|++.+++.+ |.+|+++ .+.+|.+.|+++|++
T Consensus 135 g~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~~--g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~ 204 (452)
T PTZ00094 135 GGHLTHGFYTAKKKVSATSIYF-ESLPYQVNEK--GLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFRE 204 (452)
T ss_pred CCcccccccccccccccceeee-eeeecccCCC--CCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHH
Confidence 7755433211 1100 3445556654 4999999999996531 3244443 446999999999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPS 349 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~ 349 (499)
+|+++|+++|||++|+.+.+..+-... .+.++|.+++++|||+++|.| |++++++.. . ..+... ...+..
T Consensus 205 i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~-~~l~~~~~~~~~p--- 275 (452)
T PTZ00094 205 ICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-K-PDIENKINEAVFP--- 275 (452)
T ss_pred HHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-c-hHHHHhhccccCC---
Confidence 999999999999999988664422111 123599999999999999996 777776542 1 111000 000100
Q ss_pred CCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC---CCceEEEEEec
Q 010842 350 ESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP---RHFALVCFRLN 425 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~f~~~ 425 (499)
.++++-.. ....+..+++.+...+++++.++..+++++|.+.|.+. ++++..+ +...++.|...
T Consensus 276 -----------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~ 343 (452)
T PTZ00094 276 -----------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF 343 (452)
T ss_pred -----------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC
Confidence 01111111 23455666776655677888899999999999999886 8888752 22233334332
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEeccCCCCc----HHHHHHHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAVGASLTD----ERHVVAAWELIMEGADR 492 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t----~~di~~l~~~l~~~~~~ 492 (499)
+.. .+.+...|.+.|+.+-..+... ....+|+++ +..|| ++||+++++.|.+++..
T Consensus 344 ~~~----------~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~-~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 344 GIT----------GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGT-PALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCC----------HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECC-HHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 211 3456666656675442221111 126799998 46666 99999999999998874
No 59
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=5.7e-22 Score=217.27 Aligned_cols=365 Identities=12% Similarity=0.034 Sum_probs=229.0
Q ss_pred cccccCCCCCChHHHHHHHHHHHc-----ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACF-----NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
.||.+-.+++.++..+.+++..++ |++ ..+..+..++.+-+++++.+++++|.++.. -..+||+|+|+|
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~a 109 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATAA 109 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHHH
Confidence 578877666656666666665443 222 233445556777778899999999996431 035899999999
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH---HHHhCCCCCCeEEeeCCCC------CCCccCH--HHHH
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV---CKLAGVSPANIRALPTSVD------ANFSLSP--QLLR 234 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka---~~~~G~g~~~v~~v~~~~~------~~~~~d~--~~L~ 234 (499)
+......... . ++..|+++...|.|+.-. ++..|+ .++.+|++.+ +...+++ ++|+
T Consensus 110 lnlva~~l~~---~-------~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 110 LKLVGETFPW---S-------SESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred HHHHHHHCCC---C-------CCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhh
Confidence 7655443211 0 356788888899886543 334588 8999988621 1123443 6677
Q ss_pred HHHHHHHH----cCCccEEEEEecCCCcccccCChhHHHHHHHHh-------C-CEEEeeccccchhccCccchhhhcCC
Q 010842 235 RAVEADVE----AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-------G-IWVHVDAAYAGSACICPEFRHYLNGI 302 (499)
Q Consensus 235 ~~i~~~~~----~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-------~-~~lhvD~A~g~~~~~~~~~~~~~~g~ 302 (499)
+.+.+... ....+.+|++++.+|.+|.+.|+++|..+++.. | ++++||||++.+....+-. .+
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~-----~~ 251 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLS-----RY 251 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChh-----hc
Confidence 66431110 112235899999999999999999876655532 3 5799999998876544311 11
Q ss_pred CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC---C--C--cccCCCcccCCCCC-C-CcHHH
Q 010842 303 ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES---N--S--VVDFKDWQVGTGRR-F-KSLRL 373 (499)
Q Consensus 303 ~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~---~--~--~~~~~~~~~~~sr~-~-~al~~ 373 (499)
.+|++++++|||++.|.|+|++++|++. + .. ..+.|..+..... . . ........++.|.. + ..+.+
T Consensus 252 -~~Dfl~~S~HK~~GgP~G~G~L~vr~~~-~-~~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l 326 (805)
T PLN02724 252 -PADFVVVSFYKIFGYPTGLGALLVRRDA-A-KL--LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL 326 (805)
T ss_pred -CCCEEEEecceeccCCCCceEEEEehhh-h-hh--hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence 4899999999999999999999999753 2 11 2233433221000 0 0 00001112333322 2 23566
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEEcCC--------CceEEEEEecCCCCCCcchhHHHH
Q 010842 374 WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP------RFEIVVPR--------HFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 374 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~------~~~~~~~~--------~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
..+++.+..-|++++.++..++++++.+.|++++ +++++.+. +.++|+|.+.... ...+. .
T Consensus 327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~---~~~v~--~ 401 (805)
T PLN02724 327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRAD---GSWVG--H 401 (805)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCC---CCEeC--H
Confidence 6777777666888889999999999999999886 58887542 4679999887532 00110 0
Q ss_pred HHHHHHHHhcCCEEEEeee---------------------------------ECC--EEEEEEeccCCCCcHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTI---------------------------------VGG--LYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~---------------------------------~~g--~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
..+...+...|+..-++.. +.+ .+++|+|++ +++|.+|||++++
T Consensus 402 ~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~lv~ 480 (805)
T PLN02724 402 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQKFID 480 (805)
T ss_pred HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHHHHH
Confidence 1111111223432211111 011 278999995 9999999999999
Q ss_pred HHHHHH
Q 010842 485 LIMEGA 490 (499)
Q Consensus 485 ~l~~~~ 490 (499)
.|++..
T Consensus 481 ~l~~~~ 486 (805)
T PLN02724 481 FIISSF 486 (805)
T ss_pred HHHHHh
Confidence 999864
No 60
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=9.1e-22 Score=197.07 Aligned_cols=319 Identities=19% Similarity=0.122 Sum_probs=214.4
Q ss_pred HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEE
Q 010842 112 ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVV 191 (499)
Q Consensus 112 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i 191 (499)
...+.+...|...++..++++++.+++...+|.+... ...++++|+|+|+..++.+... ++.+|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP-----EEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 4455566677778889999999999999888753221 2468899999988877776632 45679
Q ss_pred EcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCH--HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 192 YGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSP--QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 192 ~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~--~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
+++...|.++.++++..|. +++.+|.++++ .++. +.++..+.+ .+.+|+++.++|++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~--~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEEG--GFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEeccccc--CCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 9999999999999999999 99999998655 4443 555554433 345788888999999998866555
Q ss_pred ---HHHHHhCCEEEeeccccchhccCccchh-hhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCC
Q 010842 270 ---EVANEYGIWVHVDAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYL 344 (499)
Q Consensus 270 ---~ia~~~~~~lhvD~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl 344 (499)
++|+++|+|+|+|+||+++......... ...+....|.+..+.||+++ .+.++|+++++++... +.+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHHHHHHhc
Confidence 8999999999999999876543211100 11122347888999999998 4567899888774333 2222211111
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEe
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRL 424 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~ 424 (499)
.. .........++..++... +++++..++..++++++.+.|++.+...+..++....+++++
T Consensus 235 ~~-----------------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 235 TS-----------------GPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred cc-----------------CCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 00 001112233344444332 678888899999999999999998655433344445566665
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.+.. ..+.+.+.+.+.|..+.....+. +..++|++++.+ ++||++++++|++
T Consensus 297 ~~~~---------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~~ 350 (350)
T cd00609 297 PEGD---------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLAE 350 (350)
T ss_pred CCCC---------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhhC
Confidence 4421 12344555656675444333333 567899999643 9999999998863
No 61
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.2e-22 Score=192.57 Aligned_cols=305 Identities=17% Similarity=0.174 Sum_probs=199.5
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
...|...|....+|+. +++++|. .+ ++|+.+||+||..+|.+... ++..|++...+
T Consensus 28 ~~~YG~D~~~~~~e~~----~ae~~g~-~a--------~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a 83 (342)
T COG2008 28 DDVYGEDPTTNALEQR----IAELFGK-EA--------ALFVPSGTQANQLALAAHCQ-----------PGESVICHETA 83 (342)
T ss_pred CCCCCCCHHHHHHHHH----HHHHhCC-ce--------EEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence 4567778877777777 9999998 43 49999999999999998753 66789999999
Q ss_pred chhHHHH--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842 198 HSTFAKV--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVPLFLCATVGTTSTTAVDN---VEPLAEV 271 (499)
Q Consensus 198 H~s~~ka--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i 271 (499)
|....++ ...++- +..++..+..++.|++++++..|..+- -...+|.++..|..| ..|.+-| |++|.++
T Consensus 84 Hi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~ 158 (342)
T COG2008 84 HIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV 158 (342)
T ss_pred cceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence 9888775 344443 223333332345999999999988621 223456666666655 7899955 5667778
Q ss_pred HHHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 349 (499)
||++|+.||+|||--..++ ..+..+.... .+||+++.+.|.++.|. |.+++-+.+...+ ..|......
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~-----a~~~rK~~G 228 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTIKS---YVDSVSFCLTKGGGAPV--GAIVFGNRDFAKR-----ARRWRKRAG 228 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHHHh---hCCEEEEecccCCccee--eeEEEcCHHHHHH-----HHHHHHHhc
Confidence 9999999999998433222 2222222222 49999999999999884 4444445443322 122211110
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~ 429 (499)
++-|..+-+.+ ..+-++...-+...-.|..++|+.|.+.+.+.||+++..+++.|+|.++++..
T Consensus 229 -------------gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~-- 292 (342)
T COG2008 229 -------------GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES-- 292 (342)
T ss_pred -------------ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH--
Confidence 11112222211 11222233435666677778899999999999999999888999988777532
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..+.+...|..+..+...... ..+|+++ ++.+|++||++++..++++.
T Consensus 293 ------------~i~~l~~~~~~~~~~~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 ------------AIEALRLAGALFYRGVLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ------------HHHHHHhhchhheeeeeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence 114444445433322112222 4699998 69999999999999998764
No 62
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=4e-21 Score=195.94 Aligned_cols=299 Identities=14% Similarity=0.087 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
.+..++.+.+++++|.+.. ++++||++|+..++.+..+ ++..|+++...|.++..++++.
T Consensus 83 ~~~~~le~~ia~~~g~~~~---------ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~~ 142 (393)
T TIGR01822 83 DIHKELEAKIAAFLGTEDT---------ILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC 142 (393)
T ss_pred HHHHHHHHHHHHHhCCCcE---------EEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHhc
Confidence 3344444559999997543 7788999998866554421 5678999999999999999888
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
+. ..+.++ .+|+++|++.|.+..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.+
T Consensus 143 ~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g 212 (393)
T TIGR01822 143 KA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATG 212 (393)
T ss_pred CC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 87 654432 47999999999875443335567888878899999999999999999999999999999644
Q ss_pred hccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842 289 ACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 289 ~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
.... .... ...++ ..+|.++.+.||+++++ ..|+++.+. ... +.+.. ...|... +
T Consensus 213 ~~~~-~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~~-~~~-~~l~~~~~~~~~~-----------------~ 271 (393)
T TIGR01822 213 FLGP-TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTARK-EVV-ELLRQRSRPYLFS-----------------N 271 (393)
T ss_pred CcCC-CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeCH-HHH-HHHHHhCccceec-----------------C
Confidence 3211 1111 11222 25899999999998754 468776643 322 22211 1112111 1
Q ss_pred CCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842 365 GRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL 443 (499)
Q Consensus 365 sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~ 443 (499)
+.... ...+..++..+ +..+++.++..++++++.+.|++. ++++. ++..+++.+...+ .....++.
T Consensus 272 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~---------~~~~~~l~ 338 (393)
T TIGR01822 272 SLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD---------AVLAQRFA 338 (393)
T ss_pred CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence 11111 11223333332 345667788889999999999875 77764 3344566655433 12356788
Q ss_pred HHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 444 DWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 444 ~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.|.++|+.+ .+..+ .+...+|+++. ..+|++||++++++|+++.+++
T Consensus 339 ~~L~~~gI~v-~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 339 RRLLEEGIYV-TGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred HHHHHCCeeE-eeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 8888888543 33222 24456999994 8899999999999999987654
No 63
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.90 E-value=2.1e-22 Score=201.03 Aligned_cols=295 Identities=16% Similarity=0.096 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH---HHHH
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK---VCKL 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k---a~~~ 207 (499)
..++.+++++++| ++. .++++|||+|+..++.+... ++..|+++..+|+++.+ .+++
T Consensus 34 ~~~l~~~~a~~~g-~~~--------~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~~ 93 (338)
T cd06502 34 TAKLEARAAELFG-KEA--------ALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEFL 93 (338)
T ss_pred HHHHHHHHHHHhC-CCe--------EEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHHH
Confidence 4445566999999 433 58999999998888776532 46678889999988664 3556
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCccc--ccCChhHHHHHHHHhCCEEEeecc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTT--AVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G--~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
.|+ +++.+|.+. +.+|+++|++++++..+. ..++.+|+++.++|+.| ..+++++|+++|+++|+++|+|+|
T Consensus 94 ~g~---~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea 167 (338)
T cd06502 94 SGV---KLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGA 167 (338)
T ss_pred cCc---eEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechH
Confidence 788 999998753 589999999999753211 11345788888888633 247788999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
|..+....... ........+|+++.++|||++.|. |.+++.+++...........+ ..
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~-------------------~~ 225 (338)
T cd06502 168 RLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA-------------------GG 225 (338)
T ss_pred HHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh-------------------CC
Confidence 85432211110 111111358999999999999875 334444544332211111100 00
Q ss_pred CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
+.+..++..++++..+...++.+++++..++++++.+.|++. ++.+ .++..+++.++.... .....++.+
T Consensus 226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~--------~~~~~~l~~ 295 (338)
T cd06502 226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA--------NAVFVELSK 295 (338)
T ss_pred ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc--------cHHHHHHHH
Confidence 111223444555555555567778889999999999999988 4443 356778888876432 223344444
Q ss_pred HHH---hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 445 WVN---STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 445 ~l~---~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
++. ++|..+ .+. .. .++|+++ +..+|++|++++++++++
T Consensus 296 ~l~~~~~~gi~~-~~~--~~-~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 296 EAIERRGEGVLF-YAW--GE-GGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHhhhCCEEE-Eec--CC-CeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 443 567443 221 22 6799999 488899999999998865
No 64
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=7.7e-22 Score=199.29 Aligned_cols=348 Identities=13% Similarity=-0.002 Sum_probs=219.0
Q ss_pred CccccccCCCCCChHHH-HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHH
Q 010842 89 SPNFFAFFPATVSTAGF-LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSI 166 (499)
Q Consensus 89 ~p~~~~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~ 166 (499)
.|.-+-+.|++..++.. +-+.+...+-.+ ...++...++-+++++.+++++|.++.. ..+++ +|||+++
T Consensus 10 ~~~~~~f~~Gp~~~~~~~v~~a~~~~~~~~---~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~ 80 (378)
T PRK03080 10 RPADPRFSSGPCKKRPGWQLEALADALLGR---SHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAW 80 (378)
T ss_pred CCCCCCcCCCCcCCChHHHHHHHHhhhccc---CcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHH
Confidence 34334456666655433 544444322111 1224567788888999999999986431 24655 5888887
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH--HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK--VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
-.++..... + ++..+++ ...|.+-.. +++.+|+ .+++.++.+.++ .+|+++++. ++
T Consensus 81 ~~~~~~l~~---~-------~~~~vi~-~g~f~~~~~~~~~~~~g~--~~v~~~~~~~g~--~~d~~~i~~-----~~-- 138 (378)
T PRK03080 81 EMALWSLLG---A-------RRVDHLA-WESFGSKWATDVVKQLKL--EDPRVLEADYGS--LPDLSAVDF-----DR-- 138 (378)
T ss_pred HHHHHhcCC---C-------CcceEEE-eCHHHHHHHHHHHhhcCC--CCceEeccCCCC--CCCHhhcCC-----CC--
Confidence 666544311 0 2334444 456666333 3345555 267777776543 778776432 11
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
.|++++.+|.||.+.|+++|++ |++|++++||++++.+....+- ..+|.+++++|||++.|.|+|+
T Consensus 139 ----~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv--------~~iD~~~~s~~K~l~~P~G~g~ 204 (378)
T PRK03080 139 ----DVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDW--------SKLDVYTFSWQKVLGGEGGHGM 204 (378)
T ss_pred ----CEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCH--------HHCcEEEEehhhhCCCCCceEE
Confidence 4889999999999999999999 8899999999999887655432 1279999999999999999999
Q ss_pred EEEeCchhHHHhhcCC-----ccCCCCCCCCCCCcccCCCcccCCCCCCC----c-HHHHHHHHHhcHH-HHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTD-----PEYLKNKPSESNSVVDFKDWQVGTGRRFK----S-LRLWMVLRSYGVL-NLQSHIRSDI 393 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~sr~~~----a-l~~~~~l~~~g~~-g~~~~~~~~~ 393 (499)
++++++. +.+.-... +.|+.-.. .........+.+.... + ..+..+++.+-.. |++++.+|..
T Consensus 205 l~v~~~~-~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~ 278 (378)
T PRK03080 205 AILSPRA-VERLESYTPARPIPKFFRLTK-----GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTA 278 (378)
T ss_pred EEECHHH-HHhhhcccCCCCCchhheecc-----chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999753 22211111 11211000 0000000112222211 1 2335577777776 8999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEcC-C--Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEec
Q 010842 394 RLAKMFEGFVKSDPRFEIVVP-R--HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAV 469 (499)
Q Consensus 394 ~~a~~l~~~L~~~~~~~~~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~ 469 (499)
++++++++.|++.++++++.+ + .. .+++|++.+.. .....++..++.++|.++..+........+|+++
T Consensus 279 ~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-------~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~ 351 (378)
T PRK03080 279 ANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ-------AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWC 351 (378)
T ss_pred HHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch-------HHHHHHHHHHHHHcCCeeccccccCCCCcEEEec
Confidence 999999999999987777642 2 22 47788765310 0123345566666665433222111235799998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 470 GASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 470 ~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+ .++|++||++++++|+++.+++..
T Consensus 352 ~-~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 352 G-PTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 5 899999999999999998877654
No 65
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=1e-21 Score=197.26 Aligned_cols=307 Identities=16% Similarity=0.151 Sum_probs=201.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
..+|...++|+. +++++|.+. .++++|||+|+..++.+.+.. ++..|+++..+|.+.
T Consensus 15 ~~~~~~~~~~~~----la~~~~~~~---------~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~ 71 (352)
T cd00616 15 TLGPKVREFEKA----FAEYLGVKY---------AVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT 71 (352)
T ss_pred cCCHHHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 446667777776 888888653 388999999998888766311 466899999999999
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
..++...|+ +++.++++++ ++.+|+++|++.+++++ .+|+.++ ++|.+.|+++|.++|+++|+++++
T Consensus 72 ~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~ 138 (352)
T cd00616 72 ANAILLLGA---TPVFVDIDPD-TYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHcCC---eEEEEecCCC-cCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 9999999763 47999999999885443 3555553 689999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~ 358 (499)
|++|+.+...... . .... .|..+++ .|||+..+ ..|++++++++...+.... ...+.... ..+.
T Consensus 139 D~a~~~g~~~~~~--~-~~~~--~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 205 (352)
T cd00616 139 DAAQALGATYKGR--K-VGTF--GDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDR-------FKYE 205 (352)
T ss_pred ECCCCCCCeECCE--E-cccC--cceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccc
Confidence 9999755432211 0 1111 3545555 66999544 4567777765433221110 00000000 0000
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcc
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSA 433 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~ 433 (499)
......+-+...+.....+. ..++++++.++..++++++.+.|+++|+++++.++ ...+++|.+.+..
T Consensus 206 ~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 278 (352)
T cd00616 206 HEILGYNYRLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA----- 278 (352)
T ss_pred cceeeeccCcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-----
Confidence 11111111223333333333 34678888899999999999999999999987543 2356777775310
Q ss_pred hhHHHHHHHHHHHHhcCCEEE---EeeeEC--------------------CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGRVYL---THTIVG--------------------GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~---~~~~~~--------------------g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
.....++.+.|.++|+... .+.... ....+|+++ ++.+|++||++++++|+
T Consensus 279 --~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 279 --GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRVIEALR 352 (352)
T ss_pred --CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHhC
Confidence 0114567777777776221 111000 025799998 69999999999999874
No 66
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=198.66 Aligned_cols=326 Identities=14% Similarity=0.118 Sum_probs=218.4
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
..+.+.+...+......|...++...+++++.+|+.+.+|. +++ ..++|+|+++|+..++.+..+
T Consensus 40 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-------~i~~t~g~~~al~~~~~~l~~------ 106 (382)
T PRK06108 40 DFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-------RIAVTSSGVQALMLAAQALVG------ 106 (382)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-------eEEEeCChHHHHHHHHHHhcC------
Confidence 44555555555433345777778899999999999999884 333 468899999998777765532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.++|..+...++..|+ +++.+|.+.+ ++|.+|+++|++.+.+++ .+|+.+.++|+||
T Consensus 107 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPtG 172 (382)
T PRK06108 107 -----PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPTG 172 (382)
T ss_pred -----CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCCC
Confidence 456788889999999999999999 9999999753 357899999999886533 3677889999999
Q ss_pred ccC---ChhHHHHHHHHhCCEEEeeccccchhcc-Cccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhH
Q 010842 261 AVD---NVEPLAEVANEYGIWVHVDAAYAGSACI-CPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLL 333 (499)
Q Consensus 261 ~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~-~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l 333 (499)
.+- ++++|+++|+++|+|+++|++|+.+... ......... ....-..+..+.+|.++.| ..+|+++.+.. ..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-~~ 251 (382)
T PRK06108 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA-LG 251 (382)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH-HH
Confidence 874 5788999999999999999999876542 111111111 1112346678999988644 56899888542 22
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
+.+.....+... + ...+...++...+ +.+.+++..++..++++++.+.|++.+++++
T Consensus 252 -~~~~~~~~~~~~-----------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (382)
T PRK06108 252 -QVLEKLIEYNTS-----------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEV 310 (382)
T ss_pred -HHHHHHHHhccc-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 222111111100 0 0122223333333 3455678888888899999999998888887
Q ss_pred EcCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 412 VVPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 412 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
.. |..+. +.+++.+.. ...++.++|.+ .|+.+..+..+. +..++|++++ . +++++++.++.|+
T Consensus 311 ~~-p~~g~~~~~~l~~~~---------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 311 AK-PDGAMYAFFRIPGVT---------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA-R--DPARLDEAVERLR 377 (382)
T ss_pred cC-CCeeEEEEEeCCCCC---------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHH
Confidence 64 44343 444554321 13456676654 565444433332 3578999996 3 7899999999998
Q ss_pred HHHH
Q 010842 488 EGAD 491 (499)
Q Consensus 488 ~~~~ 491 (499)
++.+
T Consensus 378 ~~l~ 381 (382)
T PRK06108 378 RFLA 381 (382)
T ss_pred HHHh
Confidence 7653
No 67
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.4e-21 Score=195.55 Aligned_cols=336 Identities=15% Similarity=0.093 Sum_probs=222.2
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|....+...+++++.+|+.+..|..-.. ...++|+|+++|+..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP-----SQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCcHHHHHHHHHHhcC--------
Confidence 345555555554434456666778899999999998887753210 1468999999998877766532
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
++..|+++..+|..+..+++..|. +++.+|+++++.|.+|+++|++++++.+ .+|+++.++|+||.+
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence 456788899999999999999999 9999999865568999999999886543 267888999999998
Q ss_pred --CChhHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
+++++|+++|++||+|+++|.+|+.+.+..+. ......+....+.+..+..|.++.| ..+|+++.. ++.. +.
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~-~~ 259 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELI-KA 259 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHH-HH
Confidence 45889999999999999999999765432111 1111122223466777889999855 347877743 3322 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+. +.....+..+++.+.+. .+.+++..++..++++++.+.|++++++++..+
T Consensus 260 ~~~~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 319 (393)
T PRK05764 260 MSKLQSHS--------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP 319 (393)
T ss_pred HHHHHhhc--------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 21110000 00112344455555552 455666777777888899999999888887643
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.....+.+.+.+.. ... .....++.+.+.+ .|+.+..+..+....++|++++ .+++++++++++|.++.++.
T Consensus 320 ~g~~~~~~~~~~~~--~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~---~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 320 EGAFYVFPNVSKLL--GKS--ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA---TSLEDLEEGLERIERFLESL 392 (393)
T ss_pred CcceEEEEeccccc--ccc--cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec---CCHHHHHHHHHHHHHHHHhh
Confidence 33233444443311 000 0012456666654 5765544444444578999986 36899999999999887643
No 68
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.90 E-value=9.2e-21 Score=207.50 Aligned_cols=364 Identities=13% Similarity=0.096 Sum_probs=234.0
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHH-HHH------HHHHcccCCccccc
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFL-GEM------LCACFNSVGFNWLA 123 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~------l~~~~n~~~~~~~~ 123 (499)
|+.++..-+..+| .+.++.++++++.++..+|.. ...|.|.-..+...|+++ ..+ +++ +.+++...++
T Consensus 43 P~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~-ytPyQ~EisQ 117 (954)
T PRK05367 43 PASIRLAEPLDLP-AALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTA-YTPYQPEISQ 117 (954)
T ss_pred CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhc-cCCCChHHHH
Confidence 5667655556777 467999999999998777654 334655333333455544 222 332 3455444444
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+.....+|.+ .++++++|++.. +..++.++|.+.- ++..++.... + ++.+|++++..|++...
T Consensus 118 G~Leal~~~Q--t~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~~------~-~~~~vlv~~~~hP~~~~ 180 (954)
T PRK05367 118 GRLEALLNFQ--TMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVSK------S-KSNRFFVDDDVHPQTLD 180 (954)
T ss_pred HHHHHHHHHH--HHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhcc------C-CCCEEEEcCccCHHHHH
Confidence 5444445544 779999999865 3588888886544 3333432210 0 13579999999998664
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
. ++..|+ +++.+|.+.+ ++ .+ ..+.++.+. ++.+|.+.|+++|+++||++|+++
T Consensus 181 v~~t~a~~~G~---ev~~~~~~~d----~~--------~~------~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~ 238 (954)
T PRK05367 181 VLRTRAEPLGI---EVVVGDAAKA----LD--------HD------DVFGVLLQY-PGTSGEVRDYTALIAAAHARGALV 238 (954)
T ss_pred HHHHHHHhCCC---EEEEecCccC----CC--------cc------cEEEEEEec-CCCCeeeccHHHHHHHHHHcCCEE
Confidence 4 466788 9999997531 11 11 123444444 567999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccc-----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL-----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+||+.+.+..++.+. +--+||.++.++|||+ ++| ++|++++|++ +.+.+ ++-+.+...+..+.
T Consensus 239 ~vda~~~Al~~l~~p------ge~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~l---pgrivG~s~d~~g~ 306 (954)
T PRK05367 239 AVAADLLALTLLTPP------GEMGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSM---PGRIVGVSVDAAGN 306 (954)
T ss_pred EEEehhhhccCCCCh------hhcCCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhC---CCCeeeeecccCCC
Confidence 999966333222211 1124999999999995 444 4999999975 22222 22222211111111
Q ss_pred ccCC--Cccc-CCCCCC-------Cc-----HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842 355 VDFK--DWQV-GTGRRF-------KS-----LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419 (499)
Q Consensus 355 ~~~~--~~~~-~~sr~~-------~a-----l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 419 (499)
..+. -.+- +.-||- .+ +..++.+.++|..|++++.++...+++++++.|++ +|+++..++.+.+
T Consensus 307 ~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~ 385 (954)
T PRK05367 307 PALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDT 385 (954)
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCe
Confidence 1111 0011 111221 11 22233346689999999999999999999999987 5899887777888
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
++|++.. . ..++.++|.++|+.. . .. ....+|+|+ +..+|++||+.++++|.
T Consensus 386 ~~~~~~~-~----------~~~i~~~l~~~gi~~--~-~~-~~~~l~is~-~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 386 LTVEVGG-D----------AAAVLARALAAGINL--R-RV-DDDHVGISL-DETTTREDLAALLAVFG 437 (954)
T ss_pred EEEeCCC-C----------HHHHHHHHHHCCcee--c-cc-cCCEEEEEe-cccCCHHHHHHHHHHHc
Confidence 8888632 2 467888888888544 1 11 124599999 59999999999999996
No 69
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.90 E-value=1.1e-20 Score=189.60 Aligned_cols=337 Identities=11% Similarity=0.002 Sum_probs=211.9
Q ss_pred CCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
.+.+.-|+|+-.. +.....+.+.+....++. ..+....+......++.+.+++++|.+.. +++++||++
T Consensus 5 ~~~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------iv~~sg~~a 73 (349)
T cd06454 5 NFCSNDYLGLANH-PEVIEAAKEALDKYGVGA-GGSRLISGTSDLHEELEEELAEFHGKEAA---------LVFSSGYAA 73 (349)
T ss_pred ecccCCccccCCC-HHHHHHHHHHHHHhCCCC-CCcCeecCCchHHHHHHHHHHHHhCCCCE---------EEeccHHHH
Confidence 3455567776422 333334444444322211 11111112344555566668999987543 778888999
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 245 (499)
++.++.+..+ ++..|+++...|.++..+++..|+ .++.++ .+|++.+++.+++.. ...
T Consensus 74 ~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~ 131 (349)
T cd06454 74 NDGVLSTLAG-----------KGDLIISDSLNHASIIDGIRLSGA---KKRIFK-------HNDMEDLEKLLREAR-RPY 131 (349)
T ss_pred HHHHHHHhcC-----------CCCEEEEehhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHHHhh-ccC
Confidence 8877765532 466788899999999999999998 888775 247889999987643 123
Q ss_pred ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hh-cCCCCCceeEecccccccCCCcc
Q 010842 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YL-NGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~-~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
++.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+.+... +.... .. ......|+++.+.||+++.+ +
T Consensus 132 ~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g- 208 (349)
T cd06454 132 GKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G- 208 (349)
T ss_pred CCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCChhhhccccccCcEEEeechhhhccc-C-
Confidence 4567888889999999999999999999999999999999744321 11000 11 12235799999999999864 3
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEG 401 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 401 (499)
|+++.+ +..+.........+... .+.. .....+..+++.+.. ++...++..++++++.+
T Consensus 209 G~i~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~ 268 (349)
T cd06454 209 GYIAGS-KELIDYLRSYARGFIFS-----------------TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRR 268 (349)
T ss_pred CEEECC-HHHHHHHHHhchhhhcc-----------------CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence 665544 33332221111111110 0100 112233344444322 45677888899999999
Q ss_pred HHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHH
Q 010842 402 FVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERH 478 (499)
Q Consensus 402 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~d 478 (499)
.|++. +++++.++...++++...+ .....++.+.|.++|+.+..... ..+..++|+++. ..++++|
T Consensus 269 ~l~~~-g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~ 337 (349)
T cd06454 269 GLKEL-GFPVGGSPSHIIPPLIGDD---------PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKED 337 (349)
T ss_pred HHHhc-CCcccCCCCCcEEEEeCCC---------hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHH
Confidence 99887 7776655444444443321 12246788888888865433211 112368999995 7789999
Q ss_pred HHHHHHHHHHH
Q 010842 479 VVAAWELIMEG 489 (499)
Q Consensus 479 i~~l~~~l~~~ 489 (499)
+++++++|+++
T Consensus 338 i~~~~~~l~~~ 348 (349)
T cd06454 338 IDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 70
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.89 E-value=2.4e-20 Score=203.20 Aligned_cols=366 Identities=11% Similarity=0.016 Sum_probs=232.8
Q ss_pred hhHHHhcCCCCCCC--CCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH------HcccCCcccc
Q 010842 51 PGFLRSALPDSAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA------CFNSVGFNWL 122 (499)
Q Consensus 51 ~~~l~~~~~~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~------~~n~~~~~~~ 122 (499)
|+.++.. +..+|+ .+.++.++++++.++...|.. +..|.|.-+.+..+|+.+-+.+.+ .+.+++. +
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqa--E 141 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQA--E 141 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCch--H
Confidence 4555433 456772 578999999999998776654 445666444444455555333321 1233332 2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
.+.+.-+.-.+...++++|+|++.+ +..++.++|.+.-.++++.+... | ++.+|++++..|++..
T Consensus 142 isQG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~a~~~~~-------g-~~~~VlVs~~~hP~~~ 206 (993)
T PLN02414 142 IAQGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAMCNNILK-------G-KKKKFLIASNCHPQTI 206 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHHHHhccc-------C-CCCEEEEcCccCHhHH
Confidence 2333333344455779999999865 46899998876543333332110 1 2457999999999976
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+ +..|+ +++.+|.+.. + ...+ ..+.++ ++-.+.+|.+.|+++|+++||++|++
T Consensus 207 ~v~~t~a~~~Gi---eV~~v~~~~~-----~------~~~~------~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~GaL 265 (993)
T PLN02414 207 DVCQTRADGLGL---EVVVADEKDF-----D------YSSG------DVCGVL-VQYPATDGEVLDYAEFVKNAHANGVK 265 (993)
T ss_pred HHHHHhhhhcCC---EEEEecchhh-----c------cccC------ceEEEE-EecCCCCeEEcCHHHHHHHHHHcCCE
Confidence 554 44688 8999987521 1 0011 122333 55556699999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccc-----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL-----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
++| +|+..+........ --+||+++.++|||+ ++|. +|++++|++. .+ ..|+.+.+...+..+
T Consensus 266 ~iV-aad~lal~~l~~pg-----e~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r---~~PgriVG~s~d~~g 333 (993)
T PLN02414 266 VVM-ATDLLALTMLKPPG-----EWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KR---LMPGRIIGVSVDSSG 333 (993)
T ss_pred EEE-EECHHHhcCCCCHh-----hccCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hh---hCCCcccCcccCCCC
Confidence 999 77766554442111 114999999999998 4444 8999999853 22 233322222222111
Q ss_pred cccCC---CcccCCCCCC-------CcHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 354 VVDFK---DWQVGTGRRF-------KSLRLWMVL-----RSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 354 ~~~~~---~~~~~~sr~~-------~al~~~~~l-----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
...+. ....+..||- ....+++++ ..+|..|++++.++..++++++++.|++ +|+++..++.+.
T Consensus 334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~-~G~~~~~~~~f~ 412 (993)
T PLN02414 334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK-LGFQVQSLPFFD 412 (993)
T ss_pred CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh-cCCccCCCCCcC
Confidence 11110 0111111221 123444443 3468899999999999999999999987 479988888888
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
+++|++.. ..++.++|.++|+.+ .. .. ...+|+|+ +..+|++|||.++++|..
T Consensus 413 ~vt~~~~~------------~~~v~~~L~~~gI~l-~~--~~-~~~lrvs~-~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 413 TVKVKCSD------------ADAIADAAAKVGINL-RV--VD-ANTVTVSF-DETTTLEDVDKLFKVFAG 465 (993)
T ss_pred eEEEecCC------------HHHHHHHHHHCCCee-EE--ec-CCeEEEEe-eccCCHHHHHHHHHHHcc
Confidence 99998732 366788888888632 21 11 23599999 599999999999999963
No 71
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=4.5e-21 Score=187.71 Aligned_cols=329 Identities=16% Similarity=0.128 Sum_probs=229.9
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
....+.+...+..+ ....+|...+||++ +++.+|.+.. +.+++||.|+.++|.+.--
T Consensus 15 ~~e~~~v~~vl~sg--~i~~G~~v~~FE~~----~ae~~G~k~a---------va~~sgT~AL~laL~al~i-------- 71 (374)
T COG0399 15 EEELAAVQEVLKSG--WLTGGPFVRRFEQA----FAEYLGVKYA---------VAVSSGTAALHLALLALAI-------- 71 (374)
T ss_pred hHHHHHHHHHHHcC--CeecChHHHHHHHH----HHHHhCCCeE---------EEecChHHHHHHHHHhcCC--------
Confidence 33444555656543 23448999999998 9999999875 9999999999999986521
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
.++++|+++..++.+..+++-+.|+ .+++|++|++ +|.||++.||++|+++++ +|+..+ ..|..-
T Consensus 72 --g~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~ 136 (374)
T COG0399 72 --GPGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC 136 (374)
T ss_pred --CCCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence 1678999999999999999999999 9999999986 589999999999998765 566665 578888
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
|+++|.+||++||++++.|+|++.+.. ++....| +..+-+++|-++|.+.+. ..|+++++|++...+.......
T Consensus 137 dm~~i~~la~~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~h 211 (374)
T COG0399 137 DMDAIMALAKRHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNH 211 (374)
T ss_pred CHHHHHHHHHHcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999987653 3333333 455778999999999876 8899999987655433211110
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce----
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA---- 418 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~---- 418 (499)
-.... . .+..+....|...+.-.+-+++.....+.++++.++..++++++.+.|++.+++.+..++...
T Consensus 212 G~~~~-----~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~ 284 (374)
T COG0399 212 GLSRD-----A--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAW 284 (374)
T ss_pred CcCCC-----c--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeee
Confidence 01000 0 111112233444444444445555555899999999999999999999999887665443322
Q ss_pred -EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCE---EEEeeeE---------C-----------CEEEEEEeccCCCC
Q 010842 419 -LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRV---YLTHTIV---------G-----------GLYMLRFAVGASLT 474 (499)
Q Consensus 419 -~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~---------~-----------g~~~lRi~~~~~~~ 474 (499)
....++.+. ......+.+.|.+.|+. +..+... . ....+++=+ +|..
T Consensus 285 ~~~~i~~~~~--------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~-~p~l 355 (374)
T COG0399 285 HLYTILVDEE--------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL-HPNL 355 (374)
T ss_pred eeeEEEecCC--------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC-CCCC
Confidence 222223221 11245677777777542 2121000 0 123455544 7999
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGAD 491 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~ 491 (499)
+.+|+++++++|+++..
T Consensus 356 ~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 356 SEEDVDRVIEALKEVLG 372 (374)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 72
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.89 E-value=1.4e-20 Score=180.57 Aligned_cols=383 Identities=14% Similarity=0.096 Sum_probs=252.2
Q ss_pred CCCCCCHHHHHHHHHhhhcCCCCCCCCccccc-----cCCCCCChHHHHHHHHHHHcccCCc-ccccChhhHHHHHHHHH
Q 010842 63 PHRPESFETILKDVQEKIIPGITHWLSPNFFA-----FFPATVSTAGFLGEMLCACFNSVGF-NWLASPASTELEIVVMD 136 (499)
Q Consensus 63 p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~~l~~~~n~~~~-~~~~~p~~~~lE~~~~~ 136 (499)
|....++-++++.+.++-..+..-.....-+| |.|.....|...- .+-|...+ .-++..+..++-.++.+
T Consensus 41 ~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p----~f~~iHP~~pe~~vqG~l~li~~Lq~ 116 (496)
T COG1003 41 PLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWP----EFANIHPFQPEEQVQGYLELIYELQE 116 (496)
T ss_pred CCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhccccccc----chhhcCCCCChHHHHHHHHHHHHHHH
Confidence 33346888999999887655543322222233 2111111111111 11121111 12344567788899999
Q ss_pred HHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842 137 WLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANI 215 (499)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v 215 (499)
||+++.|++.-. +--..|+++-+++|++.|.....+ |. .+.+|++++.+|-.-.-.+.+.|+ +|
T Consensus 117 ~L~~ITG~Davs--------LQP~AGAqGE~aGll~Ir~YHe~r----G~~~R~~~LIP~SAHGTNPASAam~G~---~V 181 (496)
T COG1003 117 WLKEITGMDAVS--------LQPNAGAQGEYAGLLAIRAYHESR----GEGHRNICLIPDSAHGTNPASAAMAGF---KV 181 (496)
T ss_pred HHHHhcCCceee--------ccCCCCcchhhHHHHHHHHHHHHc----CCCcCcEEEeeccccCCChhhHhhcCc---eE
Confidence 999999998742 444567788888888887655432 22 577899999999999999999999 99
Q ss_pred EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeeccccchhccCcc
Q 010842 216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYAGSACICPE 294 (499)
Q Consensus 216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~ 294 (499)
+.|+++++| .+|+++|++++.++++ ++.+|.++| .|.+ .+|.+|+++.|++|-.|..|||---..+- .
T Consensus 182 V~V~~~~~G--~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG--~ 250 (496)
T COG1003 182 VVVKCDENG--NVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG--L 250 (496)
T ss_pred EEEecCCCC--CccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhc--c
Confidence 999999876 9999999999997775 788899887 7888 67999999999999999999985332221 1
Q ss_pred chhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCC--CCCC-cccC-CCcccCCC
Q 010842 295 FRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPS--ESNS-VVDF-KDWQVGTG 365 (499)
Q Consensus 295 ~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~--~~~~-~~~~-~~~~~~~s 365 (499)
.+ .|--++|++-++.||++.+|-| .|-+.++.. + ++||..... +... ..+. ...++.-+
T Consensus 251 ~r---PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L-------~pfLP~p~~~~~~~~y~~~~~~~~s~g~~ 318 (496)
T COG1003 251 AR---PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--L-------APFLPGPVVYHDVGEYRLDYDGKKSIGVS 318 (496)
T ss_pred cc---ccccccceEEeecccccccCCCCCCCCCCceehHhh--c-------cccCCCCcccCCCccccccCCCCccceee
Confidence 11 1223599999999999988744 566777642 3 234433110 0000 0010 01112222
Q ss_pred CCC----C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHH
Q 010842 366 RRF----K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 366 r~~----~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~ 437 (499)
..+ . -...|+.++.+|.+|+++.-+...-+|+|+.++|+. .++++..+. ...+.+...+.... ...
T Consensus 319 ~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~----~Gv 392 (496)
T COG1003 319 AAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKE----TGV 392 (496)
T ss_pred ccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhHhh----cCC
Confidence 222 1 147899999999999999999999999999999986 466654333 34455554432100 111
Q ss_pred HHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
....+.++|..-| |-.+|... -...+=|=.+ ..-+++++|++++++.++.++..+.
T Consensus 393 ~~~DvAKrLlD~G--fHaPT~~FPliV~~tLMIEPT-EsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 393 RALDVAKRLLDYG--FHAPTMYFPLIVAGTLMIEPT-ESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred cHHHHHHHHHhcC--CCCCcccCccccccceeecCC-CCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 2455677777778 44444322 2244555554 6778999999999999999887554
No 73
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=1.5e-20 Score=188.71 Aligned_cols=321 Identities=15% Similarity=0.082 Sum_probs=198.0
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+|..+.+.+..+.+. |. ....+.+++.+++++++|.+. .++|+|+|+|+..++.+....- .+.
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~~---------~~~~~g~t~al~~al~al~~~G-d~~ 87 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVED---------AVIVSSASAGIAQSVAAVITRG-NRY 87 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCCe---------EEEEcCHHHHHHHHHHHHhcCC-Ccc
Confidence 555555655555432 11 135667778888999999764 3999999999999988764310 000
Q ss_pred h---hh--ccCCeEEEcCCCCchh-----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 182 G---AE--NMHKLVVYGSDQTHST-----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 182 ~---~~--g~~~~~i~~s~~~H~s-----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
. .+ -.++..|+++. .|+. +..++.+.|+ .++.++++ +.+|+++++++|.++++ .+++
T Consensus 88 ~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~-----ai~~ 154 (363)
T TIGR01437 88 LVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA-----AILY 154 (363)
T ss_pred hhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----EEEE
Confidence 0 00 00223566665 4433 3567788899 89888763 37999999999988775 2344
Q ss_pred EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842 252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~ 331 (499)
++.+++++|.+.|+++|+++|++||+++|+|+||+... .... .+ ++|.+++++||++++|. .|+++.++ +
T Consensus 155 v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~~~~-~ 224 (363)
T TIGR01437 155 IKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYY-RL-GADLVIYSGAKAIEGPT-SGLVLGKK-K 224 (363)
T ss_pred EecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHH-Hc-CCCEEEEeCCcccCCCc-eEEEEEcH-H
Confidence 56677889999999999999999999999999997211 1101 11 38999999999999886 78776543 3
Q ss_pred hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
.+.. ... +..... . ..+.+. ...+.+..++..+-..+ .+.+++..+.++++.+.|+++|++++
T Consensus 225 ~i~~-~~~---~~~~~~------~-----~~~~~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~ 287 (363)
T TIGR01437 225 YIEW-VKL---QSKGIG------R-----AMKVGK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSA 287 (363)
T ss_pred HHHH-HHh---ccCCCc------c-----eeccCH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEE
Confidence 3321 111 110000 0 001110 01244455555543222 23333444567789999999999988
Q ss_pred EcCCC-------ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 412 VVPRH-------FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 412 ~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
..++. ...+.|.....+ ....++.+.|.+.+.-+.....+...+.+|+.+. .++++|++.+++
T Consensus 288 ~~~~~~~~~~~~~~~v~~~~~~~g--------~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~--~~~~~e~~~~~~ 357 (363)
T TIGR01437 288 SIVQDEAGRDIARAEIRFDESELG--------MTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR--SVTGGQLDIIVE 357 (363)
T ss_pred EEecCCCCCcCceEEEEEeccCCC--------CCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee--cCCHHHHHHHHH
Confidence 74221 122334331111 1146677778776743333322334456787774 367999999999
Q ss_pred HHHHH
Q 010842 485 LIMEG 489 (499)
Q Consensus 485 ~l~~~ 489 (499)
+|+++
T Consensus 358 ~l~~~ 362 (363)
T TIGR01437 358 RIREI 362 (363)
T ss_pred HHHHh
Confidence 99875
No 74
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=1.2e-20 Score=186.16 Aligned_cols=337 Identities=17% Similarity=0.118 Sum_probs=232.2
Q ss_pred CCCCCCCccccccCCCCCChHHHHHHHHHHH-cccCCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc
Q 010842 83 GITHWLSPNFFAFFPATVSTAGFLGEMLCAC-FNSVGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ 159 (499)
Q Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t 159 (499)
..++|.+-.|+|.-..+. ....+.+.+..+ ....+. .....+...+||++ +++++|.+.. ++.
T Consensus 40 ~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~----lA~f~g~e~a---------l~f 105 (388)
T COG0156 40 KVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEE----LADFLGAEAA---------LLF 105 (388)
T ss_pred eeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHH----HHHHhCCCcE---------EEE
Confidence 345677778888753322 222222223321 111111 12233455666766 9999999875 888
Q ss_pred CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842 160 NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA 239 (499)
Q Consensus 160 ~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~ 239 (499)
++|-.||+..+.+... ++.+|+..+..|.|+..++++.+. +++..+. .|+++||+.+++
T Consensus 106 ~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~~ 164 (388)
T COG0156 106 SSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLEE 164 (388)
T ss_pred cccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHHh
Confidence 8889999877776643 577899999999999999999999 8888763 589999999998
Q ss_pred HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCC--CCceeEeccccc
Q 010842 240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIE--RVDSFSFSPHKW 315 (499)
Q Consensus 240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~--~aDsi~~~~hK~ 315 (499)
....+.++.+|+.-...++.|.+.||++|.+++++|+.|+.||.||+.+.+ .+.-+... .|+. ..|.++.+.-|.
T Consensus 165 ~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~-G~~GrG~~e~~g~~~~~vdi~~gTlsKA 243 (388)
T COG0156 165 ARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVL-GPNGRGLAEHFGLEPEEVDIIVGTLGKA 243 (388)
T ss_pred hhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEcccccccc-CCCCccHHHHhCCCCccceEEEEEchhh
Confidence 654332566788888889999999999999999999999999999987754 33333322 2443 358999999999
Q ss_pred ccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHH
Q 010842 316 LLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIR 394 (499)
Q Consensus 316 l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~ 394 (499)
++. .|.++.-+.. +.+.+ ....+|++...- .+..+..+..+++.+ +...++.++..+
T Consensus 244 lGs---~Gg~v~g~~~-~~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l--~~~~~~r~~L~~ 301 (388)
T COG0156 244 LGS---SGGYIAGSAA-LIDYLRNRARPFIFSTAL----------------PPAVAAAALAALRIL--EEGPERRERLQE 301 (388)
T ss_pred hcc---cCceeeCcHH-HHHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHH--HhCHHHHHHHHH
Confidence 983 4444444443 33333 335667665421 111233344455554 344567778888
Q ss_pred HHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---EEeeeECCEEEEEEeccC
Q 010842 395 LAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---LTHTIVGGLYMLRFAVGA 471 (499)
Q Consensus 395 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lRi~~~~ 471 (499)
++.++++.++.. ++.+ .+...+++.+.+.+ +....++...|.++|+.. ..|+...|...+|++++
T Consensus 302 ~~~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd---------~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lt- 369 (388)
T COG0156 302 LAAFFRSLLKAL-GLVL-LPSESPIIPVILGD---------EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLT- 369 (388)
T ss_pred HHHHHHHHHHhc-CCcc-CCCCCCeeeeEeCC---------HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEec-
Confidence 888888666654 5554 35667788777755 344677788888887532 23666788889999995
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEG 489 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~ 489 (499)
..+|++||+.+++++.++
T Consensus 370 a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 370 AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 889999999999999875
No 75
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.2e-19 Score=185.28 Aligned_cols=331 Identities=13% Similarity=0.079 Sum_probs=216.8
Q ss_pred HHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 106 LGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 106 ~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
+.+.+...++. ....|....+...+.+++.+|+++.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 58 ~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~--------- 124 (405)
T PRK06207 58 AFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA--------- 124 (405)
T ss_pred HHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC---------
Confidence 33334444432 23456666678899999999999999964210 01468999999988777765532
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC---CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS---VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~---~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|++..++|+.+...++.+|. +++.||++ .+.++.+|+++|++++.+.++ +|+.+.++||||.
T Consensus 125 --~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k------~v~l~~P~NPTG~ 193 (405)
T PRK06207 125 --RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGVR------VFLFSNPNNPAGV 193 (405)
T ss_pred --CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcCe------EEEECCCCCCCCc
Confidence 567888899999999999999999 99999986 233479999999999866433 7889999999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CC-CCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GI-ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~-~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+ +++|+++|++||+|+++|.+|+.+.+.......... .. ..--.++.++.|.++.| .-+|+++... ... +
T Consensus 194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~-~l~-~ 271 (405)
T PRK06207 194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP-AII-D 271 (405)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-HHH-H
Confidence 966 778899999999999999999876432211111110 10 11125677789999855 4488886543 322 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....+.... ...+...+....+ +...+++.+++..+.++.+.+.|++++++++..
T Consensus 272 ~~~~~~~~~~~~--------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 331 (405)
T PRK06207 272 RMEKLQAIVSLR--------------------AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA 331 (405)
T ss_pred HHHHHHhHhccC--------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 222211111000 0112222333333 334467778888888889999998887887653
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+.....+++++.+.. . ....+.++|. +.|+.+..+..+. +..++|++++ .+.+++++.+++|.++.
T Consensus 332 p~gg~fl~~~l~~~~------~--~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~---~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 332 PQAGSYLFPRLPRLA------V--SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS---QDHAAAVAAAERIAQLI 400 (405)
T ss_pred CCeeEEEEEeCcccC------C--CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 333445555554311 0 1345667775 4676555444442 3568999997 25789999999998887
Q ss_pred HHH
Q 010842 491 DRL 493 (499)
Q Consensus 491 ~~l 493 (499)
+++
T Consensus 401 ~~~ 403 (405)
T PRK06207 401 ERY 403 (405)
T ss_pred HHh
Confidence 654
No 76
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=9.1e-20 Score=187.13 Aligned_cols=340 Identities=11% Similarity=0.028 Sum_probs=221.5
Q ss_pred HHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 106 LGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
+.+.+...+..+ ...|....+..++++++.+++.+..|.+-+. ...++|+|+|+|+.+++.+..+
T Consensus 74 ~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~v~it~G~~~al~l~~~~l~~--------- 139 (430)
T PLN00145 74 AEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST-----DDIYLTAGCAQAIEIIMSVLAQ--------- 139 (430)
T ss_pred HHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC---------
Confidence 444445544332 2356666778899999888888776663221 2569999999998887776532
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++.+++..+...+...|+ +++.+++.++.+|.+|+++|++.++++++ ++++++++||||.+-+
T Consensus 140 --~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~i~i~~P~NPtG~v~~ 208 (430)
T PLN00145 140 --PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENTV------AMVIINPNNPCGSVYS 208 (430)
T ss_pred --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCce------EEEEeCCCCCCCCCCC
Confidence 566899999999999999999999 99999876555689999999998876543 7899999999999977
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh--
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA-- 336 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~-- 336 (499)
+++|+++|+++|+++++|++|+.+.+....+... +.... --.+..+..|.+..| .-+|+++..++..+...
T Consensus 209 ~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~ 287 (430)
T PLN00145 209 YEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA-PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETK 287 (430)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC-cEEEEeccccccCCCCeeEEEEEEecchhhhhhhH
Confidence 8889999999999999999998754321111111 11111 124456688986555 66899987543221110
Q ss_pred -hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 337 -LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 337 -~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
......+... +-....+...++...+. .+.+++..+...+.++.+.+.|++++++...
T Consensus 288 ~~~~~~~~~~~------------------~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 288 VVDSIRNYLNI------------------STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred HHHHHHHHhcc------------------cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 0000001000 00001233333333332 3557788888888999999999998888754
Q ss_pred cCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 413 VPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 413 ~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..|.... +.++++... ... .. ...+++.++. +.|.+++.+..++...++|++++ .+.++++..++.|.+++
T Consensus 350 ~~P~ga~y~~v~l~~~~-~~~--~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~---~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSC-LSG--IK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA---IDPPSLEDGLERLKSFC 422 (430)
T ss_pred cCCCeeeEEEeccChhh-cCC--CC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHHH
Confidence 4454443 444443210 000 00 1234555554 44655555555655689999996 46888999999999988
Q ss_pred HHHhcc
Q 010842 491 DRLFKG 496 (499)
Q Consensus 491 ~~l~~~ 496 (499)
.+..+.
T Consensus 423 ~~~~~~ 428 (430)
T PLN00145 423 LRHAKL 428 (430)
T ss_pred HHhccc
Confidence 776554
No 77
>PRK07324 transaminase; Validated
Probab=99.88 E-value=4.7e-20 Score=186.22 Aligned_cols=317 Identities=12% Similarity=0.067 Sum_probs=205.1
Q ss_pred HHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe
Q 010842 110 LCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL 189 (499)
Q Consensus 110 l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~ 189 (499)
+...++.....|....+...+++++.+|+. +.+++ ..++|+|+++|+..++.+..+ ++.
T Consensus 47 ~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~gd 105 (373)
T PRK07324 47 FYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PGD 105 (373)
T ss_pred HHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CCC
Confidence 333344444556665667778887555442 34433 358999999999888876532 566
Q ss_pred EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hh
Q 010842 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VE 266 (499)
Q Consensus 190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~ 266 (499)
.|+++.++|.++...++..|. +++.+|++.+++|.+|+++|++.+.++++ +|+++.++|+||.+-+ ++
T Consensus 106 ~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~k------li~i~~p~NPtG~~~~~~~l~ 176 (373)
T PRK07324 106 HVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNTK------LICINNANNPTGALMDRAYLE 176 (373)
T ss_pred EEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCCc------EEEEeCCCCCCCCCCCHHHHH
Confidence 788899999999999999999 99999998755688999999988765433 7889999999999977 89
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
+|+++|++||+++++|++|...... +.........+ -...+.+..|.++.| ..+|+++. ++..+ +.+.....+..
T Consensus 177 ~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~~~~-~~I~~~s~SK~~~~~G~RiG~i~~-~~~li-~~~~~~~~~~~ 252 (373)
T PRK07324 177 EIVEIARSVDAYVLSDEVYRPLDED-GSTPSIADLYE-KGISTNSMSKTYSLPGIRVGWIAA-NEEVI-DILRKYRDYTM 252 (373)
T ss_pred HHHHHHHHCCCEEEEEccccccccC-CCCCChhhccC-CEEEEecchhhcCCccceeEEEec-CHHHH-HHHHHHhCcEE
Confidence 9999999999999999999765331 11111111111 124556789998755 45788877 33333 22222111110
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR 423 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~ 423 (499)
. ....+..+++...+. ..-+++..+...++++.+.+.|++.+++..+.+.....+.++
T Consensus 253 ~--------------------~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~ 312 (373)
T PRK07324 253 I--------------------CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVK 312 (373)
T ss_pred e--------------------cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEE
Confidence 0 012233444444432 223444555556677788888888878776644332233334
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+.... ...++.+++. +.|..+..+..+....++|++++ .+++.+++.+++|.++.++
T Consensus 313 ~~~~~---------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~---~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 313 LDVDM---------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC---CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred eCCCC---------CHHHHHHHHHHhcCEEEECccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 43210 1345666665 45755555555555578999996 3588899999999887764
No 78
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.88 E-value=1.2e-19 Score=185.89 Aligned_cols=336 Identities=15% Similarity=0.108 Sum_probs=219.3
Q ss_pred hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcC--------CCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLK--------LPKTFMFSGTGGGVIQNTTSDSILVTLIA 172 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g--------~~~~~~~~~~~~g~~t~ggt~A~~~al~~ 172 (499)
++..+.+.+...++.. ...|....+..++.+++.+|+.+.++ .+.+ ..++|+|+++|+..++.+
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-------~i~it~G~~~al~~~~~~ 123 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD-------NVVLCSGVSHAILMALTA 123 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-------hEEEeCChHHHHHHHHHH
Confidence 4566677776666542 34565555788999999999887654 2222 468999999998888776
Q ss_pred HHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 173 ARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
..+ ++..|+++.++|..+...++.+|+ +++.+|++++.+|.+|+++|++.+.+.+ .+|+.
T Consensus 124 ~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~i~~ 183 (412)
T PTZ00433 124 LCD-----------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDRT------KALIM 183 (412)
T ss_pred hcC-----------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccCc------eEEEE
Confidence 532 566788999999999999999999 9999999765568999999998876543 36788
Q ss_pred ecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEE
Q 010842 253 TVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLW 326 (499)
Q Consensus 253 t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~ 326 (499)
+.++||||.+ +++++|+++|+++|+++++|.+|..+......+... ..+. ... .++.+..|.++.| .-+|+++
T Consensus 184 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i 262 (412)
T PTZ00433 184 TNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSV-ADFDTTVPRVILGGTAKNLVVPGWRLGWLL 262 (412)
T ss_pred eCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccch-hhccCCCceEEEccchhhcCCCCeeEEEEE
Confidence 8999999987 457888999999999999999998654321111111 1111 112 4566789998544 6789988
Q ss_pred EeCc----hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHH
Q 010842 327 VKQP----GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 327 ~r~~----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l 399 (499)
..++ ..+.+.+......... ...+...+....+. ...+++..++..+..+.+
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 263 LVDPHGNGGDFLDGMKRLGMLVCG---------------------PCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred EeCCcccHHHHHHHHHHHhhccCC---------------------CChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 7432 1122222111000000 01233333333331 345666777777888889
Q ss_pred HHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHH
Q 010842 400 EGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERH 478 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~d 478 (499)
.+.|++..++.+..+.....+.+++.... ... . ....++.+++.+ .|+.+..+..+....++|++++ ..+++
T Consensus 322 ~~~L~~~~~~~~~~p~gg~f~~~~l~~~~-~~~--~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~---~~~e~ 394 (412)
T PTZ00433 322 YNHIGECIGLSPTMPRGSMFLMSRLDLEK-FRD--I-KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS---RPVEV 394 (412)
T ss_pred HHHHhcCCCCcccCCCeeEEEEEEechhh-cCC--C-CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec---CCHHH
Confidence 99998876776543333444555554210 000 0 013467777764 6765554444544578999996 34788
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 479 VVAAWELIMEGADRL 493 (499)
Q Consensus 479 i~~l~~~l~~~~~~l 493 (499)
+++.++.|.++.++.
T Consensus 395 l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 395 LREAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887654
No 79
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=9.4e-20 Score=186.08 Aligned_cols=304 Identities=13% Similarity=0.068 Sum_probs=200.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
.+...+..++.+++++++|.+.. +++++|++++..++.+..+ ++..|++++.+|+++...
T Consensus 83 ~G~~~l~~~l~~~la~~~g~~~~---------i~~tsG~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~ 142 (397)
T PRK06939 83 CGTQDLHKELEEKLAKFLGTEDA---------ILYSSCFDANGGLFETLLG-----------KEDAIISDALNHASIIDG 142 (397)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcE---------EEEcChHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHH
Confidence 34567888889999999997643 5555568888777654421 567899999999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
++..|. +++.++. +|+++|++.+++....+.++.+|+.....+++|.++++++|.++|++||+|+++|++
T Consensus 143 ~~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~ 212 (397)
T PRK06939 143 VRLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDS 212 (397)
T ss_pred HHhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECc
Confidence 999998 7777653 488999999876433333456677666778899999999999999999999999999
Q ss_pred ccchhccC-ccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcc
Q 010842 285 YAGSACIC-PEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 285 ~g~~~~~~-~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
|+.+.... ........++ ...|.++.++||+++.+ ..|+++.+.+ .. +.+.. ...+...
T Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~~-~~-~~l~~~~~~~~~~--------------- 274 (397)
T PRK06939 213 HAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRKE-VI-DWLRQRSRPYLFS--------------- 274 (397)
T ss_pred ccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCHH-HH-HHHHHhCcccccc---------------
Confidence 96332211 1101111222 24789999999999655 4688776543 22 33321 1111111
Q ss_pred cCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842 362 VGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR 440 (499)
Q Consensus 362 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 440 (499)
++... .+..+..+++.+. ..+++.++..++++++.+.|++. ++++. ++...++.+.+.+ .....
T Consensus 275 --~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~ 339 (397)
T PRK06939 275 --NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD---------AKLAQ 339 (397)
T ss_pred --CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC---------HHHHH
Confidence 11000 1122233344331 22466777888999999999886 66654 3444444444322 12246
Q ss_pred HHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 441 KLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 441 ~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.++|.++|+.+. +..+ .+..++|+++. ...+++||+++++.|+++.+++
T Consensus 340 ~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 340 EFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHCCceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 78888888886554 3322 23468999984 6688999999999999987764
No 80
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=4e-20 Score=186.77 Aligned_cols=326 Identities=14% Similarity=0.082 Sum_probs=210.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH-----Hh------------Hhhh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA-----LD------------AVGA 183 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~-----~~------------~~~~ 183 (499)
|.......++|..+.+...++||.+... +=.-||+.||+.+..+..... +. +.+.
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~an--------vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~ 158 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHAY--------VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE 158 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCccc--------ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence 4455677899999999999999987653 666788999998888776420 00 0000
Q ss_pred ---hccCCeEEEc---CCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 184 ---ENMHKLVVYG---SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 184 ---~g~~~~~i~~---s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
..+.+..|+. +...|.+........|... .++..+++++ ++.+|++++++.+.+.+ | .|++++.++
T Consensus 159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~ 230 (493)
T PRK13580 159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSA 230 (493)
T ss_pred hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence 0111233432 3334555433333444211 5566677643 35899999999998754 3 466667676
Q ss_pred cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~ 337 (499)
. |.+.|+++|+++|+++|++++||+||+.+.+..............+|++++++||++++|.| |++++++. +.+.+
T Consensus 231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~--l~~~L 306 (493)
T PRK13580 231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE--YADAV 306 (493)
T ss_pred c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH--HHHHH
Confidence 6 55779999999999999999999999987665332221112234699999999999988874 77777654 22333
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRH 416 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~ 416 (499)
....+|+.+... .........++..+....++++.++..+++++|++.|.+. |+.++. ...
T Consensus 307 ~~a~P~i~gg~l-----------------~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 307 DKGCPLVLGGPL-----------------PHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred hhCCCcccCCCc-----------------cHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 222345443210 0011122223333333445778899999999999999987 888764 356
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---EeeeECC---EEEEEEeccCC----CCcHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTIVGG---LYMLRFAVGAS----LTDERHVVAAWELI 486 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g---~~~lRi~~~~~----~~t~~di~~l~~~l 486 (499)
.+++.+.+.+. +.....+.+.|.+.|+.+- .|+...+ ...||+++. . ..+++||+++++.|
T Consensus 369 shIV~V~lg~~--------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~-A~ttrg~teedi~~iad~l 439 (493)
T PRK13580 369 NHLVLIDVTSF--------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTP-ALTTLGMGSDEMDEVAELI 439 (493)
T ss_pred CCEEEEEeCCH--------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccc-hhhhcCCCHHHHHHHHHHH
Confidence 68888877542 1123356667888886432 1333344 567999984 5 33699999999999
Q ss_pred HHHHHHH
Q 010842 487 MEGADRL 493 (499)
Q Consensus 487 ~~~~~~l 493 (499)
.++.+..
T Consensus 440 ~~~l~~~ 446 (493)
T PRK13580 440 VKVLSNT 446 (493)
T ss_pred HHHHHhh
Confidence 8887643
No 81
>PLN00175 aminotransferase family protein; Provisional
Probab=99.87 E-value=4.3e-20 Score=188.81 Aligned_cols=329 Identities=13% Similarity=0.111 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
+..+.+.+...+......|....+..++++++.+|+.+..|.+-+. ....++|+|+++|+..++.+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 3455666666665444567777788999999999999988864211 01358899999998777665432
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++++.|..+...++..|. +++.||+++++ |.+|+++|++.+.+.++ +|+++.++||||.+
T Consensus 138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~~~l~~~~~~~~k------~i~i~~p~NPtG~~ 203 (413)
T PLN00175 138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPPD-FAVPEDELKAAFTSKTR------AILINTPHNPTGKM 203 (413)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCccc-CCCCHHHHHHhcCcCce------EEEecCCCCCCCcC
Confidence 567888899999999999999999 99999997653 79999999999865443 67888999999999
Q ss_pred C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
- ++++|+++|++|++|+++|.+|..+.+. +..... +.+...-..++.+..|.++.| .-+|+++.... .. +.
T Consensus 204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~-l~-~~ 280 (413)
T PLN00175 204 FTREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LT-WG 280 (413)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH-HH-HH
Confidence 5 5788999999999999999999776432 111111 112112335667889999855 56788876542 22 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+... ....+..+++...+ +...+++..++..+.++.+.+.|++. ++++. +
T Consensus 281 l~~~~~~~~~--------------------~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 338 (413)
T PLN00175 281 VRQAHSFLTF--------------------ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-P 338 (413)
T ss_pred HHHHHhhccC--------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-C
Confidence 2111111100 11223344444444 34556777888888899999999887 67765 4
Q ss_pred CCceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 415 RHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 415 ~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
|..+. +.+++.+.+ . ....++.+.|. +.|+.+..+..+. +..++|++++ .+++++++.++.|.
T Consensus 339 p~g~~f~~~~~~~~~------~-~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~---~~~e~l~~~~~rL~ 408 (413)
T PLN00175 339 SSGTYFVMVDHTPFG------F-ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC---KDEETLRAAVERMK 408 (413)
T ss_pred CCeeEEEEEeccccC------C-CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc---CCHHHHHHHHHHHH
Confidence 54443 444443211 0 01356677765 4576655554442 3468999996 36899999999998
Q ss_pred HHHH
Q 010842 488 EGAD 491 (499)
Q Consensus 488 ~~~~ 491 (499)
++.+
T Consensus 409 ~~~~ 412 (413)
T PLN00175 409 TKLK 412 (413)
T ss_pred HHHh
Confidence 8754
No 82
>PLN02187 rooty/superroot1
Probab=99.87 E-value=2.1e-19 Score=185.72 Aligned_cols=342 Identities=11% Similarity=0.037 Sum_probs=220.3
Q ss_pred HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+... ...|...++...+.+++.+|+.+.+|++-+. ...++|+|+++|+..++.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-----~~I~it~G~~~al~~~~~~l~~------- 153 (462)
T PLN02187 86 IEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP-----EDIFLTAGCNQGIEIVFESLAR------- 153 (462)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCCHHHHHHHHHHHhcC-------
Confidence 34444454444322 2456666778889999999998877653221 2468999999998887776532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++.++++.+...++..|+ +++.++..++++|.+|+++|++++++.+ .+++.+.++||||.+
T Consensus 154 ----pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG~v 220 (462)
T PLN02187 154 ----PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCGNV 220 (462)
T ss_pred ----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCCCc
Confidence 567889999999999999999999 9999998654568999999998876543 378889999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCchhHH--
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLV-- 334 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~-- 334 (499)
-+ +++|+++|++||+|+++|++|+.+.+..+.+... ..+. ... .+..+..|.++.| .-+|+++..++....
T Consensus 221 ~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~ 299 (462)
T PLN02187 221 YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFET 299 (462)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHH
Confidence 55 8889999999999999999998764422111111 1111 112 3446789996666 668998875543111
Q ss_pred -HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 335 -KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 335 -~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
+.+.....+..- +-....+..+++...+ ..+.+++..+...+.++++.+.|++++++.
T Consensus 300 ~~~~~~~~~~~~~------------------~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~ 361 (462)
T PLN02187 300 TKVLQSIKQNLDV------------------TPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV 361 (462)
T ss_pred HHHHHHHHHhccc------------------cCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 111111111000 0000123334444443 245677778888888999999999886543
Q ss_pred EEcCCCc-eEEEEEecCCCCCCcchhHHHHHHHHHH-HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 411 IVVPRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDW-VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 411 ~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.+..|.. +.+.+++.... ... .. ...+++.+ +.++|+++..+..+....++|++++ +.++.++..+++|.+
T Consensus 362 ~~~~P~gg~fl~~~l~~~~-~~~--~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~---~~~e~l~~al~rL~~ 434 (462)
T PLN02187 362 CPKKPESCTYLLTKLELSL-MDN--IK-DDIDFCVKLAREENLVFLPGDALGLKNWMRITIG---VEAHMLEDALERLKG 434 (462)
T ss_pred CCCCCCEeEEEEeecChhh-CCC--CC-CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC---CCHHHHHHHHHHHHH
Confidence 3334544 33434443110 000 00 02234333 4566766555555555689999997 468889999999999
Q ss_pred HHHHHhcc
Q 010842 489 GADRLFKG 496 (499)
Q Consensus 489 ~~~~l~~~ 496 (499)
++++..+.
T Consensus 435 ~l~~~~~~ 442 (462)
T PLN02187 435 FCTRHAKK 442 (462)
T ss_pred HHHHhhhc
Confidence 98776543
No 83
>PLN02656 tyrosine transaminase
Probab=99.87 E-value=2.1e-19 Score=183.78 Aligned_cols=339 Identities=13% Similarity=0.052 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
|..+.+.+...+..+ ...|....+...+++++.+++.+..|.+-+. ...++|+|+++|+..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------ 118 (409)
T PLN02656 50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL-----DDVFITSGCTQAIDVALSMLAR------ 118 (409)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCChHHHHHHHHHHHhC------
Confidence 455666666655543 3457667788899999999998887763221 2468999999998877776532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.++|..+...+...|+ +++.+|++++.+|.+|+++|++++++++ .+|+.+.++|+||.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~ 184 (409)
T PLN02656 119 -----PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPCGN 184 (409)
T ss_pred -----CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCCCC
Confidence 566788899999988888899999 9999998654458899999998876543 36888889999999
Q ss_pred c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCc-----
Q 010842 262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQP----- 330 (499)
Q Consensus 262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~----- 330 (499)
+ +++++|+++|+++|+|+++|++|+.+.+........ +.... --.+..+..|.++.| .-+|+++..++
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~ 263 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIV-PVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFR 263 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccC-cEEEEcccchhccCcceeEEEEEEeCcccccc
Confidence 9 678999999999999999999998764321111111 11111 123456789985555 67899988532
Q ss_pred -hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842 331 -GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 331 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
..+.+.+......... ...+...++...+. ...+++..++..+.++.+.+.|+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~---------------------~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 264 DPKIVERIKKYFDILGG---------------------PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred cHHHHHHHHHHHhhhcC---------------------CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 1122222111000000 11233444444442 3457777778888888999999887
Q ss_pred CCeEEEcCCCceE-EEEEecCCCCCCcchhHHHHHH-HHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 407 PRFEIVVPRHFAL-VCFRLNPYPHSGSADTEMLNRK-LLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 407 ~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~-l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
+++..+.+|..+. +++++.... ... .. ...+ +.+.+.+.|+.+..+..+....++|++++ .+++++++.++
T Consensus 323 ~~~~~~~~p~gg~~~w~~l~~~~-~~~--~~-~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~---~~~e~l~eal~ 395 (409)
T PLN02656 323 PCITCPHKPEGSMAVMVKLNLSL-LED--IS-DDIDFCFKLAREESVIILPGTAVGLKNWLRITFA---ADPSSLEEALG 395 (409)
T ss_pred CCCcCCcCCCeEEEEEEecchhh-cCC--CC-CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC---CCHHHHHHHHH
Confidence 6654333455444 334442100 000 00 0122 33455567766655555555678999997 36889999999
Q ss_pred HHHHHHHHHhc
Q 010842 485 LIMEGADRLFK 495 (499)
Q Consensus 485 ~l~~~~~~l~~ 495 (499)
.|+++..+...
T Consensus 396 rl~~~~~~~~~ 406 (409)
T PLN02656 396 RIKSFYLRHSK 406 (409)
T ss_pred HHHHHHHHhcc
Confidence 99998776543
No 84
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.87 E-value=4.2e-21 Score=192.40 Aligned_cols=338 Identities=13% Similarity=0.040 Sum_probs=215.5
Q ss_pred ccCCCCCChHHHHHHHHHHHc----ccCCcccccC---hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC-hHHH
Q 010842 94 AFFPATVSTAGFLGEMLCACF----NSVGFNWLAS---PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT-TSDS 165 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g-gt~A 165 (499)
.|.|++...|..+.+.+...+ |.+...+..+ +.+.++-.++++.+++++|.+... ..+||+| ||+|
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence 366788788877777777666 4444445555 566678888999999999985432 3578877 9988
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccC-HHHHHHHHHHHHHcC
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLS-PQLLRRAVEADVEAG 244 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d-~~~L~~~i~~~~~~g 244 (499)
+-+++...... +.+..+|++....|.+ .+.++..|+ +++.+++++++.+ .+ ++..+..+.+++
T Consensus 76 ~~~~~~~l~~~--------~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~~-~~~~~~~~~~~~~~~--- 139 (355)
T cd00611 76 FAAVPLNLLGD--------KGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGKY-TKIPDVETWDLAPDA--- 139 (355)
T ss_pred HHHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccCC-CCCCCHhhcCCCCCC---
Confidence 76666554210 1145566665444444 345677798 9999998654322 13 222223343333
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
.+|++++.+|.||.+ +. ++++.||+.++||++++.+....+- +..|....++||+++ |.|.|+
T Consensus 140 ---~lV~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv--------~~~~~~~ss~~K~lG-P~G~g~ 202 (355)
T cd00611 140 ---AYVHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDV--------SKFGVIYAGAQKNLG-PAGVTV 202 (355)
T ss_pred ---CEEEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCH--------HHhCEEEeecccccC-CCceEE
Confidence 379999999999997 22 4555699999999999877655432 123445556999875 899999
Q ss_pred EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~ 402 (499)
++++++.. .+.-...+.+..... ...... ..++... ....+..+++.+-.+ |++++.++..++++++++.
T Consensus 203 l~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~--~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~ 274 (355)
T cd00611 203 VIVRKDLL-GKARKITPSMLNYKT-----HADNNS--LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDT 274 (355)
T ss_pred EEECHHHH-hhcccCCCCcccHHH-----HHhcCC--CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 99987543 111111111110000 000000 0111111 235777888888777 7999999999999999999
Q ss_pred HhcCCCeE-EEcC--CCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHH
Q 010842 403 VKSDPRFE-IVVP--RHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERH 478 (499)
Q Consensus 403 L~~~~~~~-~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~d 478 (499)
|+++||+. ...+ ... .+++|.+... .+..++.+.+.++|.+ ... ..+..+.+|+|+. +++|++|
T Consensus 275 l~~~~gl~~~~~~~~~rs~~vvsf~~~~~---------~l~~~~~~~~~r~G~~-~~~-~~~~~g~vR~S~~-~~nt~ed 342 (355)
T cd00611 275 IDNSNGFYRGPVDKRARSRMNVPFRLGKE---------ELEKEFLKEAEAAGMI-GLK-GHRSVGGIRASIY-NALSLEG 342 (355)
T ss_pred HHhCccccccCCCHHHcCceEEEEEcCCh---------hhhHHHHHHHHHCCCc-ccC-CCcccCeEEEEcc-CCCCHHH
Confidence 99998863 2211 133 4588886541 2234555667778864 222 2122357999995 8899999
Q ss_pred HHHHHHHHHHHH
Q 010842 479 VVAAWELIMEGA 490 (499)
Q Consensus 479 i~~l~~~l~~~~ 490 (499)
|++++++|+++.
T Consensus 343 i~~l~~al~~~~ 354 (355)
T cd00611 343 VQALADFMKEFQ 354 (355)
T ss_pred HHHHHHHHHHHh
Confidence 999999999853
No 85
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=2.7e-20 Score=190.41 Aligned_cols=339 Identities=15% Similarity=0.099 Sum_probs=208.5
Q ss_pred ccccCCCCCChHHHHHHHHHHHc-cc------CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACF-NS------VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~-n~------~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 164 (499)
.+...+++..++..+.+.+...+ .. ....+...+....+|+.+.+++++++|.+... ++++|||+
T Consensus 21 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~--------v~~~sgt~ 92 (402)
T cd00378 21 TLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYAN--------VQPHSGSQ 92 (402)
T ss_pred CeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCcee--------eecCCcHH
Confidence 55556665555445555554433 11 12234455677888888889999999987542 55557889
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-----HHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-----CKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVE 238 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-----~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~ 238 (499)
|+..++.+... ++..|+++...|.+.... ++..|. .++.++++.+ .++.+|+++|++++.
T Consensus 93 a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~ 158 (402)
T cd00378 93 ANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMAL 158 (402)
T ss_pred HHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHHH
Confidence 98877776532 566788888887654322 556676 7777777543 147999999999986
Q ss_pred HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS 318 (499)
Q Consensus 239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 318 (499)
+. .|.+|+.+.++ +|...|+++|+++|+++|+++++|++|..+..........+ ..+|+++.++|||+.+
T Consensus 159 ~~-----~~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~---~~~dv~~~s~sK~l~G 228 (402)
T cd00378 159 EF-----KPKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPL---PGADVVTTTTHKTLRG 228 (402)
T ss_pred hC-----CCCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcc---cCCcEEEeccccCCCC
Confidence 42 13355555543 46778999999999999999999999754432211111111 1479999999999966
Q ss_pred CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842 319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAK 397 (499)
Q Consensus 319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~ 397 (499)
|. +|+++.+++....+.......+... +.... ...+..++......+++++.++..++++
T Consensus 229 ~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 289 (402)
T cd00378 229 PR-GGLILTRKGELAKKINSAVFPGLQG------------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK 289 (402)
T ss_pred CC-ceEEEeccHHHHHHHHHHhCccccC------------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 65 4555555533332211111111111 00001 1122223333322366778888999999
Q ss_pred HHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---eeeE---CCEEEEEEecc
Q 010842 398 MFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTIV---GGLYMLRFAVG 470 (499)
Q Consensus 398 ~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~---~g~~~lRi~~~ 470 (499)
++.+.|++. +++++. +...+.+++.+.+.. . ....+.+.|.+.|+.+.. +... .+...+|+++.
T Consensus 290 ~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~------~--~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~ 360 (402)
T cd00378 290 ALAEALKER-GFKVVSGGTDNHLVLVDLRPKG------I--TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTP 360 (402)
T ss_pred HHHHHHHhC-CCeEeecCCCCeEEEEeCCccC------C--CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCH
Confidence 999999987 888764 345566666665321 0 023445556666754421 1111 13357999884
Q ss_pred CCC----CcHHHHHHHHHHHHHHHH
Q 010842 471 ASL----TDERHVVAAWELIMEGAD 491 (499)
Q Consensus 471 ~~~----~t~~di~~l~~~l~~~~~ 491 (499)
.. .+++||+++++.|+++.+
T Consensus 361 -~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 361 -AMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred -HHHHhCCCHHHHHHHHHHHHHHHh
Confidence 43 479999999999988654
No 86
>PLN02483 serine palmitoyltransferase
Probab=99.87 E-value=2.5e-19 Score=186.00 Aligned_cols=342 Identities=14% Similarity=0.083 Sum_probs=217.0
Q ss_pred CCCCCccccccCCCCCChHHHHHHHHHHHcccCCc---ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC
Q 010842 85 THWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGF---NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT 161 (499)
Q Consensus 85 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~---~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g 161 (499)
.++.+-.|+|+-...+..+..+.+.+..+-...+. .+...+...++|++ +++++|.++. +++++
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~----lA~~~g~~~a---------i~~~~ 169 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEEL----VARFVGKPAA---------IVFGM 169 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHH----HHHHhCCCcE---------EEECC
Confidence 45677789998755555555555655553211111 12233444555555 8999997654 67777
Q ss_pred hHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842 162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241 (499)
Q Consensus 162 gt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 241 (499)
|+.+|+.++.+... ++..|++++..|.++..+++..|+ +++.++.+ |+++|++.+++..
T Consensus 170 G~~an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i 228 (489)
T PLN02483 170 GYATNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQI 228 (489)
T ss_pred HHHHHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhh
Confidence 88888866655422 567899999999999999999999 99999853 5688888776543
Q ss_pred HcC-------CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCC--CCCceeEe
Q 010842 242 EAG-------LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGI--ERVDSFSF 310 (499)
Q Consensus 242 ~~g-------~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~--~~aDsi~~ 310 (499)
..+ ..-.+|+.....+++|.+.++++|+++|++||+++++|+||+.+.. .+..+. ...++ ..+|.++.
T Consensus 229 ~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~ 307 (489)
T PLN02483 229 AEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMG 307 (489)
T ss_pred hccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEE
Confidence 211 0113455555568899999999999999999999999999974432 111111 01122 35789999
Q ss_pred cccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-c---HHHH
Q 010842 311 SPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-G---VLNL 385 (499)
Q Consensus 311 ~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g---~~g~ 385 (499)
+.+|.++.+ .|+++.+ ++.+ +.+.. ...+..... ..+..+..+..+++.+ + .+..
T Consensus 308 SfSKs~g~~--GG~i~~~-~~li-~~l~~~~~~~~~~~~----------------~~p~~~~~~~aaL~~l~~~~g~~~~ 367 (489)
T PLN02483 308 TFTKSFGSC--GGYIAGS-KELI-QYLKRTCPAHLYATS----------------MSPPAVQQVISAIKVILGEDGTNRG 367 (489)
T ss_pred ecchhcccC--ceEEEcC-HHHH-HHHHHhCccccccCC----------------cCHHHHHHHHHHHHHHHhCccccch
Confidence 999999754 3666543 3333 22221 111111100 0000111222334332 1 2234
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----CC
Q 010842 386 QSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----GG 461 (499)
Q Consensus 386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g 461 (499)
.++.++..++++++.+.|+++ ++++..+....++.+.+... ....++.++|.++|+.+.. ..+ .+
T Consensus 368 ~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~---------~~~~~~~~~Ll~~GI~v~~-~~fp~~p~~ 436 (489)
T PLN02483 368 AQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP---------AKIPAFSRECLKQNVAVVV-VGFPATPLL 436 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH---------HHHHHHHHHHHHCCcEEee-eCCCCCCCC
Confidence 556788889999999999988 78776554555655554321 1234677778888876553 222 23
Q ss_pred EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 462 LYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 462 ~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...+|+++. ..+|++||++++++|.++.+.+
T Consensus 437 ~~~vRi~is-a~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 437 LARARICIS-ASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred CceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 367999994 7789999999999999988764
No 87
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.87 E-value=4.5e-19 Score=184.88 Aligned_cols=332 Identities=17% Similarity=0.124 Sum_probs=214.5
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
...|....+..++.+++.+|+.+..|.+.+. ...++|+|+++|+..++.+.... ++..|+++.++
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP-----SDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 3457777788999999999999887865321 25689999999988887765411 56789999999
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE 274 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~ 274 (499)
+..+...++..|. .++.||++++++|.+|+++|++++++..+++.++.+|+++.++||||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999987656899999999999865444445667777899999999966 8899999999
Q ss_pred hCCEEEeeccccchhccC-ccc---hhhhcCCCC-----Ccee-Eecccccc-c-CCCcceEEEEe--CchhHHHhhcC-
Q 010842 275 YGIWVHVDAAYAGSACIC-PEF---RHYLNGIER-----VDSF-SFSPHKWL-L-SYLDCCCLWVK--QPGLLVKALST- 339 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~-~~~---~~~~~g~~~-----aDsi-~~~~hK~l-~-~p~~~g~l~~r--~~~~l~~~~~~- 339 (499)
|++|+++|.+|+...+.. ..+ .....++.. ...+ ..+..|.+ + ...-+|++... +++.. +.+..
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li-~~l~~~ 328 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVR-EQIYKL 328 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHH-HHHHHH
Confidence 999999999998654311 111 111112111 1133 45789975 4 34668988763 33322 22211
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHH-------HHHHHHHHHHHHHHHHHHHHhcCC
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVL-------NLQSHIRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~-------g~~~~~~~~~~~a~~l~~~L~~~~ 407 (499)
...++. ...+...++...+ +.. .+++..++..+.++.+.+.|++++
T Consensus 329 ~~~~~~----------------------~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~ 386 (481)
T PTZ00377 329 ASINLC----------------------SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE 386 (481)
T ss_pred hheecC----------------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111110 0123333333333 111 122222334667788899999888
Q ss_pred CeEEEcCCCceEEEE-Eec-CCCCCCc---chhHHHHHHH-HHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHH
Q 010842 408 RFEIVVPRHFALVCF-RLN-PYPHSGS---ADTEMLNRKL-LDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERH 478 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f-~~~-~~~~~~~---~~~~~~~~~l-~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~d 478 (499)
++++. +|+.+.+.| ++. +...... .... ....+ ...+.+.|+.++.+..+. +..++|++++ +++++
T Consensus 387 g~~~~-~p~gg~fl~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~e~ 461 (481)
T PTZ00377 387 GVSCQ-PVEGAMYAFPRIELPEKAIQEAKERGLA-PDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPEEQ 461 (481)
T ss_pred CcEee-cCCeeEEEEeeccCchhhHHHHHhcCCC-cHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCHHH
Confidence 88876 455444444 332 1110000 0000 01223 344455676666555554 3468999995 67889
Q ss_pred HHHHHHHHHHHHHHHhc
Q 010842 479 VVAAWELIMEGADRLFK 495 (499)
Q Consensus 479 i~~l~~~l~~~~~~l~~ 495 (499)
+++.+++|.++.++..+
T Consensus 462 l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 462 IEEMVKKIKEFHESFMK 478 (481)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887654
No 88
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=6.1e-20 Score=187.36 Aligned_cols=308 Identities=12% Similarity=0.061 Sum_probs=195.1
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FA 202 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ 202 (499)
.|...++|+.+.+.+++++|.+... ++++|||.||+.++.+... ++..|+++...|.+ +.
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~al--------v~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~ 129 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDYAN--------VQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT 129 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCceE--------EecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence 4667888886777899999987642 4578999999988876532 67889999999987 33
Q ss_pred HHHHHhCCCCCCe--EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 203 KVCKLAGVSPANI--RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 203 ka~~~~G~g~~~v--~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
..++....+. .. +.++++.. ++.+|+++|++.+... .|.+|+... +.+|..-|+++|.++|++||++++
T Consensus 130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li 200 (416)
T PRK13034 130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM 200 (416)
T ss_pred cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence 3333211111 22 34555433 3579999999988542 244555433 346888899999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
||+||+.+.+..+... ..+..+|.+++++|||+.+|.| |+++.+++... ..... +++..
T Consensus 201 vD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~~~~---~~~~~------------- 259 (416)
T PRK13034 201 VDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KKINS---AVFPG------------- 259 (416)
T ss_pred EeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHH-HHHHh---hcCCc-------------
Confidence 9999987765433211 1234599999999999987865 56666554322 11111 11110
Q ss_pred ccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHH
Q 010842 361 QVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 361 ~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
++.+..+.. ..+..++...-..+..++.++..+++++|++.|++. |+++..+ +..+++.+.+.... ..
T Consensus 260 -~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~--------~~ 329 (416)
T PRK13034 260 -LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG--------LS 329 (416)
T ss_pred -ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC--------CC
Confidence 001111111 112222222211234466789999999999999988 8988743 45677766664422 11
Q ss_pred HHHHHHHHHhcCCEEEEe---e---eECCEEEEEEeccCC----CCcHHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTH---T---IVGGLYMLRFAVGAS----LTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~---~---~~~g~~~lRi~~~~~----~~t~~di~~l~~~l~~~~~ 491 (499)
...+.++|.+.|+.+... . .......+|+++ +. ..+++||++++++|.++..
T Consensus 330 ~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~-~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 330 GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGT-PAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCc-HHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 344556777778543220 0 011234699997 35 5679999999999998765
No 89
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=7.6e-20 Score=185.44 Aligned_cols=328 Identities=13% Similarity=0.094 Sum_probs=217.7
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+.+...+......|...++...+.+++.+|+.+.+|.+-+. ....++|+|+++|+..++.+..+
T Consensus 38 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~---------- 103 (378)
T PRK07682 38 VREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN---------- 103 (378)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC----------
Confidence 3344444443333456666788999999999999988874210 01368999999998877765532
Q ss_pred cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC--
Q 010842 186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-- 263 (499)
Q Consensus 186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-- 263 (499)
++..|+++.++|..+...++..|. .++.++++.+++|.+|+++|++++.+++ .+|+.+.++||||.+-
T Consensus 104 -~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~ 173 (378)
T PRK07682 104 -PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNK 173 (378)
T ss_pred -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCH
Confidence 566788899999999999999999 8999998754457999999999886543 3677788999999994
Q ss_pred -ChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 264 -NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 264 -~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
++++|+++|++|++++++|.+|+.+.... .... .+.+...-..+..+..|.++.| ..+|+++..+. +.+.+..
T Consensus 174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~--~i~~l~~ 250 (378)
T PRK07682 174 SELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVY--FSEAMLK 250 (378)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHH--HHHHHHH
Confidence 48899999999999999999998764321 1111 1112222346777889999855 45888887543 2222221
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
...+... ....+...++...+ |...+++..++..+.++++.+.|++. ++++. +|..
T Consensus 251 ~~~~~~~--------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g 308 (378)
T PRK07682 251 IHQYSMM--------------------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGG 308 (378)
T ss_pred HHHhhcc--------------------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCe
Confidence 1111000 01123334444444 34556777788888899999999987 77654 4544
Q ss_pred eEEEE-EecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 418 ALVCF-RLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 418 ~~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+.| .+.+.. .+ ..++.+.+. ++|+.+..+..+. +..++|++++ ++++++++.+++|+++.+++
T Consensus 309 ~~~~~~~~~~~~------~~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 309 AFYAFPSISSTG------LS--SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA---TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred eEEEEEeccCCC------CC--HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHhhc
Confidence 44444 332211 01 345666665 5676554443332 3578999996 36899999999999887653
No 90
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=1.7e-19 Score=182.11 Aligned_cols=339 Identities=12% Similarity=0.036 Sum_probs=203.9
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHHHcccC---CcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCccEE
Q 010842 84 ITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV---GFNWLASP---ASTELEIVVMDWLATMLKLPKTFMFSGTGGGV 157 (499)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~ 157 (499)
.+.|.+-.|+|+-..++..++ +.+.+..+..+. +.+...+. +...+-.++.+.+++++|.+.. +
T Consensus 6 ~~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~---------l 75 (370)
T PRK05937 6 SIDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEA---------F 75 (370)
T ss_pred eEEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeE---------E
Confidence 345677778888755443333 344444433211 12222222 2455556667779999998654 6
Q ss_pred EcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHH
Q 010842 158 IQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV 237 (499)
Q Consensus 158 ~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i 237 (499)
+.++|+.||+. +..+... ++..|+.+...|.|+..+++.+.- ..+.++ ..|+++|++.|
T Consensus 76 ~~~sG~~a~~~-~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l 134 (370)
T PRK05937 76 IVPSGYMANLG-LCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLL 134 (370)
T ss_pred EECChHHHHHH-HHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHH
Confidence 66677788863 3222110 356788889999999999888642 333332 46999999999
Q ss_pred HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccc
Q 010842 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKW 315 (499)
Q Consensus 238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~ 315 (499)
++..+.+....+|++...++++|.+.|+++|+++|+++|+++|||+||+.+.+..+ .... ..+....+.+..+.+|.
T Consensus 135 ~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~-g~g~~~~~~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 135 ESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKGFCHSLGYENFYAVLVTYSKA 213 (370)
T ss_pred HhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCcEEEEechhh
Confidence 86543222334677788999999999999999999999999999999986543221 1111 11222334556677798
Q ss_pred ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842 316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL 395 (499)
Q Consensus 316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~ 395 (499)
++ |.|+|+++.++. .........+|.+... ........+..++..+...+ +...++..++
T Consensus 214 ~g-~~G~~vl~~~~~--~~~~~~~~~~~~~s~~----------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l 273 (370)
T PRK05937 214 LG-SMGAALLSSSEV--KQDLMLNSPPLRYSTG----------------LPPHLLISIQVAYDFLSQEG-ELARKQLFRL 273 (370)
T ss_pred hh-cCceEEEcCHHH--HHHHHHhCCCCeecCC----------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence 86 567777665431 1111111122222110 01112233445555553333 3456777888
Q ss_pred HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842 396 AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475 (499)
Q Consensus 396 a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t 475 (499)
++++.+.|.... +. ..+.+.+... ....+.+.|.++|. ++.........++|+++ +..+|
T Consensus 274 ~~~l~~~l~~~~-------~~-~~~~i~~~~~----------~~~~~~~~L~~~gi-~v~~~~~~~~~~iRis~-~~~~t 333 (370)
T PRK05937 274 KEYFAQKFSSAA-------PG-CVQPIFLPGI----------SEQELYSKLVETGI-RVGVVCFPTGPFLRVNL-HAFNT 333 (370)
T ss_pred HHHHHHhcCCCC-------CC-CEEEEEeCCh----------hHHHHHHHHHHCCe-eEEeeCCCCCCEEEEEc-CCCCC
Confidence 888888776421 00 1122344321 13567777878885 33322222335799999 59999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 010842 476 ERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~l~ 494 (499)
++||++++++|+++.+++.
T Consensus 334 ~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 334 EDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999999999999887653
No 91
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=3.9e-20 Score=186.91 Aligned_cols=332 Identities=12% Similarity=0.074 Sum_probs=208.3
Q ss_pred HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
.+.+...+... .+..+|...++|++ +++++|.+.. ++++|||+|+..++.+..-.
T Consensus 17 ~~~~~~~l~~~--~~~~g~~~~~le~~----la~~~g~~~~---------v~~~sgt~al~lal~al~~~---------- 71 (379)
T PRK11658 17 LAAVKEVLRSG--WITTGPKNQALEQA----FCQLTGNQHA---------IAVSSATAGMHITLMALGIG---------- 71 (379)
T ss_pred HHHHHHHHHcC--CccCCHhHHHHHHH----HHHHhCCCeE---------EEECCHHHHHHHHHHHcCCC----------
Confidence 34444445432 22347878888888 8888887643 88999999998888765211
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..|+++..+|.+...++...|+ .++.++++.+ ++.+|+++|++++.++++ +|+. ++++|...|++
T Consensus 72 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~---~~~~G~~~d~~ 138 (379)
T PRK11658 72 PGDEVITPSLTWVSTLNMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIP---VHYAGAPADLD 138 (379)
T ss_pred CCCEEEECCCcHHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEE---eCCCCCcCCHH
Confidence 567899999999999999999999 9999999865 378999999999976543 4553 34689999999
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh--cCCccCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL--STDPEYL 344 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~--~~~~~yl 344 (499)
+|+++|+++|+++++|+||+.+....... .+-...+.++++++|.+.++ ..|++++++++...+.. .....+.
T Consensus 139 ~i~~~a~~~gi~vi~D~a~a~g~~~~~~~----~g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~ 213 (379)
T PRK11658 139 AIRAIGERYGIPVIEDAAHAVGTYYKGRH----IGARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGV 213 (379)
T ss_pred HHHHHHHHcCCeEEEECCCccCCeECCee----cCCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCc
Confidence 99999999999999999998543322111 12123578899999998654 45666666655433221 1111111
Q ss_pred CCCCC-CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----Cce
Q 010842 345 KNKPS-ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFA 418 (499)
Q Consensus 345 ~~~~~-~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~ 418 (499)
..... .....+.+..+ ..+..++...+-+++.....+++++..++..++++++.+.|+++|...+..+. ...
T Consensus 214 ~~~~~~~~~~~~~~~~~--~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~ 291 (379)
T PRK11658 214 DAFDRQTQGRAPQAEVL--TPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH 291 (379)
T ss_pred chhhhhcccCCCcceee--ccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE
Confidence 00000 00000011101 12222333344455555556899999999999999999999988643232221 123
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---Eeee----EC--------------CEEEEEEeccCCCCcHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTI----VG--------------GLYMLRFAVGASLTDER 477 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~~--------------g~~~lRi~~~~~~~t~~ 477 (499)
.+++++.+.. ......++.+.|.++|+..- .+.. +. ....+.+- +++..|++
T Consensus 292 ~~~~~~~~~~------~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~ 364 (379)
T PRK11658 292 LFIIRVDEER------CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDA 364 (379)
T ss_pred EEEEEECCcc------ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHH
Confidence 4555654311 00114567777777774211 1100 00 01223333 36889999
Q ss_pred HHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGA 490 (499)
Q Consensus 478 di~~l~~~l~~~~ 490 (499)
|+++++++|+++.
T Consensus 365 ~~~~i~~~i~~~~ 377 (379)
T PRK11658 365 DVDRVITALQQIA 377 (379)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 92
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.87 E-value=2.1e-19 Score=188.94 Aligned_cols=334 Identities=10% Similarity=0.005 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
|..+.+.+...+.. ...|....+..++.+++.+++.+..+ ++.+ ..++|+|+++++..++.+..+
T Consensus 164 p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~----- 230 (517)
T PRK13355 164 PDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD----- 230 (517)
T ss_pred CHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-----
Confidence 33333434443432 34577777788999998888876543 2332 468999999998887766532
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.++|..+..++...|. +++.++++++++|.+|+++|++++.++++ +|+++.++||||
T Consensus 231 ------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~k------~i~i~nP~NPTG 295 (517)
T PRK13355 231 ------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRTK------AIVIINPNNPTG 295 (517)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCce------EEEEECCCCCCC
Confidence 567899999999999999999999 99999998766799999999998876543 788889999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeE-ecccccccCC-CcceEEEEeC-chh--
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFS-FSPHKWLLSY-LDCCCLWVKQ-PGL-- 332 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~~p-~~~g~l~~r~-~~~-- 332 (499)
.+-+ +++|+++|++|++++++|++|..+.+....+.....-....-.++ .+..|.++.| .-+|+++... +..
T Consensus 296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~ 375 (517)
T PRK13355 296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK 375 (517)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence 9966 889999999999999999999865432111112111111122343 4568987554 5689988643 221
Q ss_pred -HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHH---HHHHHHHHHHHHHHHhcCC
Q 010842 333 -LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSH---IRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 333 -l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~---~~~~~~~a~~l~~~L~~~~ 407 (499)
+...+..... ... .......+++...+.. ..+++. .++..+.++++.+.|+++|
T Consensus 376 ~~~~~l~~~~~-~~~--------------------~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 434 (517)
T PRK13355 376 DYIEGLNMLAN-MRL--------------------CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIP 434 (517)
T ss_pred HHHHHHHHHhc-CcC--------------------CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111110000 000 0123444555554421 112222 2345566788999999988
Q ss_pred CeEEEcCCCceEEEE-EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHH
Q 010842 408 RFEIVVPRHFALVCF-RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
++++. +|..+.+.| ++.... .. .......+.+.|.++|+++..+..+. +..++|++++ .+++++++.++
T Consensus 435 g~~~~-~p~g~fy~~~~l~~~~-~~---~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~ 506 (517)
T PRK13355 435 GISAV-KPKAAFYIFPKIDVKK-FN---IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMD 506 (517)
T ss_pred CcccC-CCCeeeEEEeecCccc-CC---CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHH
Confidence 98865 566666666 443210 00 00011223344566776665555553 4678999995 57899999999
Q ss_pred HHHHHHHHH
Q 010842 485 LIMEGADRL 493 (499)
Q Consensus 485 ~l~~~~~~l 493 (499)
.|.++.+..
T Consensus 507 rl~~~~~~~ 515 (517)
T PRK13355 507 RLADFFSYY 515 (517)
T ss_pred HHHHHHHHh
Confidence 999887643
No 93
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.87 E-value=4.3e-20 Score=183.11 Aligned_cols=367 Identities=13% Similarity=0.087 Sum_probs=195.2
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHH-HHH--HHc---ccCCcccccC
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGE-MLC--ACF---NSVGFNWLAS 124 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~--~~~---n~~~~~~~~~ 124 (499)
|++++..-+..+|+ +.++.++++++.++..+|.. ...|+|--......|+.+.+ ++. .++ .+++...+++
T Consensus 32 P~~i~~~~~~~lp~-~~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG 107 (429)
T PF02347_consen 32 PEEIRLKKPLNLPE-PLSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQG 107 (429)
T ss_dssp -GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHH
T ss_pred CHhhcCCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHH
Confidence 67776655667774 48999999999998877765 45577755555667777777 442 223 3334333444
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
.....+|.+ .++++++|++.. +..+..++|.+- .|+.++.+...+ ++-+|++|...|+.....
T Consensus 108 ~Lq~lfe~Q--s~i~eLTGmdva-------NaSlyd~atA~a-Ea~~ma~r~~~~-------~~~~vlv~~~~hP~~~~v 170 (429)
T PF02347_consen 108 RLQALFEYQ--SMICELTGMDVA-------NASLYDGATAAA-EAMLMAVRATKR-------KRNKVLVPESLHPQTRAV 170 (429)
T ss_dssp HHHHHHHHH--HHHHHHHTSSEE--------SEBSSCCHHHH-HHHHHHHHHHTT----------EEEEETTS-CHHHHH
T ss_pred HHHHHHHHH--HHHHHhhCCCcc-------CCCCCChhHHHH-HHHHHHHHhccc-------CCcEEEEcCCcChhhHHH
Confidence 444555555 779999999864 236677777332 233222221100 234689999999998776
Q ss_pred HHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 205 CKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 205 ~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
++. .|+ +++.+|+++++ ..| ......|+++.|++ .|.++++++|++++|++|..++
T Consensus 171 ~~t~a~~~g~---~iv~~~~~~~~--~~d--------------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~ 230 (429)
T PF02347_consen 171 LRTYAAPLGI---EIVEVPLDEDG--TTD--------------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVI 230 (429)
T ss_dssp HHHHCCHCCE---EEEEE-BBTTC--SB---------------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEE
T ss_pred HHHhhhhCCe---EEEEecccccC--Ccc--------------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEE
Confidence 554 577 89999988655 556 22356888888876 8999999999999999999998
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+ ++--......... |--+||.+ +.-||.|+.|. ++|++.+|+. + ....|..+.+...+..+..
T Consensus 231 ~-~ad~~aL~~l~~P-----ge~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l---~r~lPGRiVG~t~D~~G~~ 298 (429)
T PF02347_consen 231 V-GADPNALGGLKSP-----GEYGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--L---VRQLPGRIVGQTKDADGKR 298 (429)
T ss_dssp E-CGGCCGCCTC--G-----GGGT-SEE-EECCTTTT---CCC-S--EEEEE-GG--G---GGGS-S-EEEEEEBCCCSC
T ss_pred E-ecCHHHHhCcCCh-----hhcCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--h---hhhCCCceecccccccccc
Confidence 7 6543322221111 11149999 45588887773 4788988885 2 2334555544322222222
Q ss_pred cCCCcccC----CCCCC------------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842 356 DFKDWQVG----TGRRF------------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419 (499)
Q Consensus 356 ~~~~~~~~----~sr~~------------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 419 (499)
.|. .+++ .-||- -++..++.+..+|.+|+++..++...+|+|+++.|++..++.+ ..+.+..
T Consensus 299 ~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e 376 (429)
T PF02347_consen 299 AFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFE 376 (429)
T ss_dssp CEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSS
T ss_pred eee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCcee
Confidence 211 0111 11121 1345677788899999999999999999999999999744433 3344443
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
..+...+. ....++.++....| +....... ..+-+|++ ..+|++|||.+++++
T Consensus 377 ~v~~~~~~---------~~~~~l~~~~~~~g---l~~~~~~~-~~~li~~T-E~~t~edid~lv~~f 429 (429)
T PF02347_consen 377 FVVVFSKD---------KEVEELLKRGIEGG---LNLRYPDD-GALLICVT-ETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEEEESS----------HHHHHHHHTT-------EEEGGG-S-SEEEEE---TT--HHHHHHHHH--
T ss_pred eeeecCCc---------HHHHHHHHHHHhcC---CCccccCC-CeEEEEcc-CCCCHHHHHHHHhcC
Confidence 33333221 11223666666666 22222222 26889996 999999999999875
No 94
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=1.1e-19 Score=186.55 Aligned_cols=308 Identities=13% Similarity=0.046 Sum_probs=194.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.+....+|+.+++++++++|.+... +++++||+|+..++.+... ++..|+++..+|.++..
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~--------i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~ 126 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYAN--------VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLT 126 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcee--------eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCccc
Confidence 3456778887888999999997652 5555678888776665521 56678888888865422
Q ss_pred ---HH--HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 204 ---VC--KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 204 ---a~--~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. ...|+ +++.+|++.+ ++.+|+++|++++++.. |.+|+++. +.+|...|+++|+++|+++|++
T Consensus 127 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~ 195 (416)
T PRK00011 127 HGSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAY 195 (416)
T ss_pred ccccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCE
Confidence 11 22344 7788888743 36899999999997521 22454432 3567778999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+++|+||+.+.......... +..+|.++.++||++.+|. +|+++.++++...+.......+...
T Consensus 196 livD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------ 259 (416)
T PRK00011 196 LMVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG------------ 259 (416)
T ss_pred EEEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC------------
Confidence 99999986543321111111 1258999999999997665 4566665544332221111111100
Q ss_pred CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhH
Q 010842 359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
+... ....++.++.....+++++++++..++++++++.|++. ++++.. .+..+++.+.+.+.. .
T Consensus 260 ------~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~------~- 325 (416)
T PRK00011 260 ------GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG------L- 325 (416)
T ss_pred ------CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC------C-
Confidence 0001 11223334434445678889999999999999999986 788763 234466666664321 0
Q ss_pred HHHHHHHHHHHhcCCEEEEee-eE-----CCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLTHT-IV-----GGLYMLRFAVGA---SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~-~~-----~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~ 492 (499)
....+.+.|.+.|+.+-... .+ .....+|++... ...|++|+++++++|+++...
T Consensus 326 -~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 326 -TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred -CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 13456677777786542110 11 123458986521 245799999999999987553
No 95
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=2.5e-19 Score=170.32 Aligned_cols=334 Identities=15% Similarity=0.082 Sum_probs=232.7
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
.|..+.+.+....+...++|. -....+-+++.+|.++..++.... ...++++|---++.+++.+. .+
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~VVpgi~~~I~~~----T~-- 105 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPGVVPGISLAIRAL----TK-- 105 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCcchHhHHHHHHHh----Cc--
Confidence 345577788888887777776 334668999999999999985321 13455655444444444333 22
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|++..+.++.+.++....|- +++..|.- +++.|.||.++||+++.+.. +.+.+.+.|.||+|
T Consensus 106 -----~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~G 172 (388)
T COG1168 106 -----PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTG 172 (388)
T ss_pred -----CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCC
Confidence 566777888899999999999999 99999887 56679999999999998753 23788999999999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEecccccccCC-CcceEEEEeCchhH
Q 010842 261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLL 333 (499)
Q Consensus 261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l 333 (499)
.+ +.|.+|++||++||+.++.|..|+-..+....+-... .....--..+.++.|.++.+ ..|+.+++.|++..
T Consensus 173 rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr 252 (388)
T COG1168 173 RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR 252 (388)
T ss_pred ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH
Confidence 99 8899999999999999999999987655432221111 11111224556679999876 66888888887643
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL--WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFE 410 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~--~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~ 410 (499)
.+..... ...... ...++.+ +.+.-..|.+++.+.++...++.+++.+.+.+ +|+++
T Consensus 253 ~~~~~~l-~~~~~~-------------------~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~ 312 (388)
T COG1168 253 AKFLKRL-KRNGLH-------------------GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK 312 (388)
T ss_pred HHHHHHH-HHhcCC-------------------CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 2222111 111110 1123433 33333458999999999999999999999976 68999
Q ss_pred EEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E--CCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 411 IVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V--GGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 411 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+..+.........+.+.+. ...++.+.|..+.++.+..+. + .|++++|+.+. ++++-+++.++.|+
T Consensus 313 v~~p~gTYL~WLD~r~l~l--------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a---cpr~~L~eal~ri~ 381 (388)
T COG1168 313 VTEPQGTYLAWLDCRELGL--------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA---CPRAILEEALERLK 381 (388)
T ss_pred EecCCCceeeeeeccccCC--------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC---CCHHHHHHHHHHHH
Confidence 8866666666666665331 124566777777777776544 3 35689998776 67778888888887
Q ss_pred HHHHH
Q 010842 488 EGADR 492 (499)
Q Consensus 488 ~~~~~ 492 (499)
...+.
T Consensus 382 ~al~~ 386 (388)
T COG1168 382 RALKK 386 (388)
T ss_pred HHHhc
Confidence 66543
No 96
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.3e-20 Score=183.92 Aligned_cols=224 Identities=17% Similarity=0.086 Sum_probs=155.0
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+.+.+++++|.+..+ ++++|+|+++..++.+... ++..|+++..+|.|+..++...|+
T Consensus 64 ~~~~~A~~~ga~~~~--------~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~--- 121 (294)
T cd00615 64 AQELAARAFGAKHTF--------FLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA--- 121 (294)
T ss_pred HHHHHHHHhCCCCEE--------EEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC---
Confidence 344489999987653 5689999999888776532 577899999999999999999999
Q ss_pred CeEEeeCCCCCC----CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842 214 NIRALPTSVDAN----FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 214 ~v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
++++++.+.+.. +.+|++++++++++.. .+.+|+++.+ |++|.+.|+++|+++|+++|++++||+||+...
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhh
Confidence 999998765432 3799999999987521 2457777876 679999999999999999999999999998765
Q ss_pred ccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C
Q 010842 290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F 368 (499)
Q Consensus 290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 368 (499)
.+.+....... ...+|.++.++||++.++.++|++++++.......+..... +. +.+.+ .
T Consensus 197 ~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~~-----------------~ttsps~ 257 (294)
T cd00615 197 RFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-LH-----------------QSTSPSY 257 (294)
T ss_pred ccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-HH-----------------CCCCcHH
Confidence 44332221111 12599999999999988888888888765211111111000 00 11111 1
Q ss_pred C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842 369 K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 369 ~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~ 404 (499)
. ...+-.+++.+..+| ++++++..+++++++++|.
T Consensus 258 ~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 258 LILASLDVARAMMALEG-KELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHh
Confidence 1 123333444443344 4467788888999988875
No 97
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=7.8e-19 Score=180.41 Aligned_cols=333 Identities=14% Similarity=0.088 Sum_probs=204.1
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+...+++......|..+++..+||++ +++++|.+. +++|+|||+|+..++.+..+
T Consensus 59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~---------vv~t~ggt~A~~~~~~all~---------- 115 (460)
T PRK13238 59 MSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY---------TIPTHQGRAAEQILFPVLIK---------- 115 (460)
T ss_pred hhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc---------EEECCCHHHHHHHHHHHhCC----------
Confidence 3444444443444578889999999998 666667643 49999999999988776532
Q ss_pred cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC------CCCc--cCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD------ANFS--LSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~------~~~~--~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
++. |+++...+.+....+.+.|. .++.+|+++. ..|. +|+++|++.|.+... .++.+|+++.++|
T Consensus 116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N 188 (460)
T PRK13238 116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN 188 (460)
T ss_pred -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence 455 66676655556666888899 9999998641 2344 999999999975311 1245899999999
Q ss_pred ccc-cc---CChhHHHHHHHHhCCEEEeeccccc-hhccCc----cchhh-hc-----CCCCCceeEecccccccCCCcc
Q 010842 258 STT-AV---DNVEPLAEVANEYGIWVHVDAAYAG-SACICP----EFRHY-LN-----GIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 258 ~~G-~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~~~~----~~~~~-~~-----g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
++| .+ +++++|+++|++||+++++|+|+.. .+++.. .+... .. -...+|++++++||.+++|.|
T Consensus 189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G- 267 (460)
T PRK13238 189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG- 267 (460)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence 998 44 5678999999999999999997733 122211 11110 00 013589999999999999875
Q ss_pred eEEEEeCchhHHHhhcCC---ccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTD---PEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
|++++++.+...+.-... ..++. .++-... ..++..+++..- -+..++...+.+++
T Consensus 268 G~i~~~d~~l~~~~~~~~~~~~g~~t-----------------~~g~~~~~~~Ala~~l~e~~---~~~~~~~~~~~~~~ 327 (460)
T PRK13238 268 GLLCFRDEDLFTECRTLCILYEGFPT-----------------YGGLAGRDMEALAVGLYEGM---DEDYLAYRIGQVEY 327 (460)
T ss_pred eEEEcChHHHHHHhhhcccccCCccc-----------------ccCcHHHHHHHHHhhHHHhh---ChHHHHHHHHHHHH
Confidence 888888755443221111 01110 1111111 111111222110 12334444556789
Q ss_pred HHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-------CC------EE
Q 010842 399 FEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWVN-STGRVYLTHTIV-------GG------LY 463 (499)
Q Consensus 399 l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g------~~ 463 (499)
|.+.|.+. |+.++.+.....+...+..... ...... -..+++.+|. +.|+..+..+.+ .+ ..
T Consensus 328 l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~--~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~ 404 (460)
T PRK13238 328 LGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQF--PAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAE 404 (460)
T ss_pred HHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCC--chHHHHHHHHHHcCeeeecccceecccCCCCccccCCccc
Confidence 99999886 8988865554444343322100 000000 0244555554 446544443322 12 47
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 464 MLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+|+++.-..-|.++++.+.++|+++.++
T Consensus 405 ~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 405 LLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred eEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 89999963344899999999999988753
No 98
>PLN02822 serine palmitoyltransferase
Probab=99.86 E-value=1.2e-18 Score=180.46 Aligned_cols=333 Identities=11% Similarity=0.071 Sum_probs=210.4
Q ss_pred HHHHHHHHHcccCCcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 105 FLGEMLCACFNSVGFNWLASP---ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
.+.+.+...+..++.++..++ +......++.+.+++++|.++. .++++|++ ++..++.+..+
T Consensus 127 ~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~--------i~~s~G~~-a~~sai~a~~~------ 191 (481)
T PLN02822 127 KIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDS--------ILYSYGLS-TIFSVIPAFCK------ 191 (481)
T ss_pred HHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCE--------EEECCHHH-HHHHHHHHhCC------
Confidence 344555555544333322221 2344455555559999987654 25555544 66665554421
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC---Ccc-EEEEEecCCC
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG---LVP-LFLCATVGTT 257 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g---~~p-~~vv~t~gtt 257 (499)
++.+|++....|+++..++.+.|. +++.++.+ |.++|+..+++..+.. ..+ .+|++....+
T Consensus 192 -----~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~ 256 (481)
T PLN02822 192 -----KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQ 256 (481)
T ss_pred -----CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCC
Confidence 566788899999999999999988 88888764 5667777776533221 122 5777878888
Q ss_pred cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCC--CCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
++|.+-|+++|+++|++||+++++|++|+.+.+ .+..+. ...++ ...|.++.+..|.++.+ .|+++.+. +..
T Consensus 257 ~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~--GG~i~g~~-~ii 332 (481)
T PLN02822 257 NSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATE--GGFCTGSA-RVV 332 (481)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhC--CeEEEcCH-HHH
Confidence 899999999999999999999999999984432 211111 11233 35799999999999754 26666543 322
Q ss_pred HHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 334 VKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 334 ~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
+.+. ....|.+.. +. .+..+.+ +++.+ +...++.++..++++++.+.|++.+++
T Consensus 333 -~~~~~~~~~~~fsa-----------------~l--Pp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~ 390 (481)
T PLN02822 333 -DHQRLSSSGYVFSA-----------------SL--PPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGL 390 (481)
T ss_pred -HHHHhcCCceeecc-----------------cc--CHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 2222 122222211 10 1222233 33332 223567888999999999999998888
Q ss_pred EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEe--eeEC---CEEEEEEeccCCCCcHHHHHHHH
Q 010842 410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTH--TIVG---GLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~--~~~~---g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
++..++..+++.+.+.... ..........+++.++|. ++|..+... ..+. ....+|++++ ..+|++||++++
T Consensus 391 ~~~~~~~spi~~l~l~~~~-~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~ 468 (481)
T PLN02822 391 SIGSNTLSPIVFLHLEKST-GSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVS-AGHTESDILKAS 468 (481)
T ss_pred ccCCCCCCCEEEEEeCCCc-ccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHH
Confidence 8766667777777775321 000011234567888887 667544321 1221 2346999984 778999999999
Q ss_pred HHHHHHHHHHhc
Q 010842 484 ELIMEGADRLFK 495 (499)
Q Consensus 484 ~~l~~~~~~l~~ 495 (499)
++|+++...+.+
T Consensus 469 ~~l~~~~~~~~~ 480 (481)
T PLN02822 469 ESLKRVAASVLK 480 (481)
T ss_pred HHHHHHHHHHhc
Confidence 999999887754
No 99
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.86 E-value=9.2e-19 Score=178.84 Aligned_cols=335 Identities=13% Similarity=0.068 Sum_probs=211.2
Q ss_pred HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+... ...|....+...+++++.+++....|.+-.. ...++|+|+|+|+..++.+...
T Consensus 51 ~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~ii~t~G~t~al~~~~~~l~~------- 118 (403)
T TIGR01265 51 PEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA-----DDVVLTSGCSQAIEICIEALAN------- 118 (403)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecChHHHHHHHHHHhCC-------
Confidence 34444554444322 2345455566677777666666544442110 1468999999999888877642
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|..+...+...|+ +++.++++.++++.+|++++++++.++++ +|++++++|+||.+
T Consensus 119 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~i~~p~NPtG~~ 185 (403)
T TIGR01265 119 ----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKTV------AIVVINPSNPCGSV 185 (403)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCcc------EEEEecCCCCCCCC
Confidence 566788899999999999999999 99999886555578999999998865443 68888999999999
Q ss_pred C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCc-hhH--
Q 010842 263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQP-GLL-- 333 (499)
Q Consensus 263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~-~~l-- 333 (499)
- ++++|.++|+++|+|+++|++|+.+....+.+.. +..+. ... .++.+..|.++.| ..+|+++..++ ..+
T Consensus 186 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~ 264 (403)
T TIGR01265 186 FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD 264 (403)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHH
Confidence 5 4899999999999999999999876432211111 11111 112 4556789986655 66899887643 111
Q ss_pred --HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842 334 --VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPR 408 (499)
Q Consensus 334 --~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 408 (499)
.+.+.....+... ...+...+....+ ....+++..++..+.++++.+.|+..++
T Consensus 265 ~~~~~~~~~~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 323 (403)
T TIGR01265 265 TVLQGLKNLLQRILG---------------------PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPG 323 (403)
T ss_pred HHHHHHHHHhhhhcC---------------------CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1111000000000 0112222222222 2345667777788888899999998888
Q ss_pred eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+++..+...+.+.+++..... .. . ....++.+++. +.|..+..+..+....++|++++ ..++.+++.++.|.
T Consensus 324 ~~~~~p~~g~f~~~~~~~~~~-~~--~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~~l~ 396 (403)
T TIGR01265 324 LVCPKPEGAMYLMVKLELELF-PE--I-KDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT---VPESMLEEACSRIK 396 (403)
T ss_pred ceecCCCceeEEEEecccccc-CC--C-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence 875545455555566543100 00 0 01345666654 56765555544544678999996 34778999998888
Q ss_pred HHHHH
Q 010842 488 EGADR 492 (499)
Q Consensus 488 ~~~~~ 492 (499)
++.++
T Consensus 397 ~~~~~ 401 (403)
T TIGR01265 397 EFCER 401 (403)
T ss_pred HHHHh
Confidence 87754
No 100
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.4e-19 Score=181.83 Aligned_cols=327 Identities=13% Similarity=0.058 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...++.. ...|. .++...+.+++.+|+.+..|.+-+. ....++|+|+++|+..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------ 115 (399)
T PRK07681 47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------ 115 (399)
T ss_pred CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 344566666555432 22333 3567889999999999887763210 01468899999988776665432
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.++|..+...++.+|+ +++.||+++++.|.+|+++|++++.+++ .+|+.+.++||||.
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~ 181 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVPA 181 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcCc
Confidence 567899999999999999999999 9999999876668899999999886543 37888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+ +++|+++|++||+|+++|.+|+.+............ +...-..+..+..|.++.| .-+|+++.. +... +
T Consensus 182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~-~ 259 (399)
T PRK07681 182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIV-R 259 (399)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-HHHH-H
Confidence 966 788999999999999999999876432111111111 1111235566889999744 558888753 3332 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....+... ....+...++...+ +.+.+++..+...++++++.+.|++. ++++..
T Consensus 260 ~~~~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 318 (399)
T PRK07681 260 ALTQFKSNTDY--------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDK 318 (399)
T ss_pred HHHHHHhhccc--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 22211111000 01122333333333 33456666667777888899999887 777654
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.....+++++.+.. ...++.+.+.+ .|+.+..+..+. +..++|++++ .+++++++++++|++.
T Consensus 319 p~~g~f~~~~l~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 319 PAGSMFVWAEIPKGW---------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENIRNS 385 (399)
T ss_pred CCeeeEEEEECCCCC---------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHh
Confidence 444444555554311 13456677766 675544443332 2468999996 4689999999999884
No 101
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=1.7e-18 Score=177.08 Aligned_cols=341 Identities=10% Similarity=0.013 Sum_probs=220.0
Q ss_pred hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
+|..+.+.+...++.. ...|....+...+.+++.+|+.+..|++-+. ...++|+|+++++..++.+..+
T Consensus 50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~----- 119 (409)
T PLN00143 50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP-----DDVYLTLGCKHAAEIIIKVLAR----- 119 (409)
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----hhEEEecChHHHHHHHHHHHcC-----
Confidence 3445555555555433 2446666778889999999998887763221 2468999999998887776543
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.+++..+...++..|. +++.++++++.+|.+|+++|++++++++ ..++.+.++||||
T Consensus 120 ------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPTG 184 (409)
T PLN00143 120 ------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPCG 184 (409)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCCC
Confidence 567788999999999999999999 9999998644458999999998875433 3677888999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC--ceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV--DSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a--Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
.+-+ +++|+++|++|++++++|.+|..+..-...... +..+... -.++.+..|.++.| .-+|+++..++..+.
T Consensus 185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~ 263 (409)
T PLN00143 185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLL 263 (409)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhh
Confidence 9966 778888999999999999999876432111111 1111111 24567789996555 668999885442221
Q ss_pred H------hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 335 K------ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 335 ~------~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
+ .+...... . .++ ..+...++...+ ....+++..++..+..+++.+.|++
T Consensus 264 ~~~~~~~~~~~~~~~--~----------------~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 264 QICEIADSIKKALNP--A----------------PFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred hhHHHHHHHHHHHhc--c----------------CCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 11100000 0 000 123333333333 2356778888888888888899988
Q ss_pred CCCeEEEcCCCc-eEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842 406 DPRFEIVVPRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 406 ~~~~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
+++.....+|.. ..+++++.... ... . ....++..++ .+.|..+..+..+....++|++++ ++++++++.+
T Consensus 323 ~~~~~~~~~p~gg~f~w~~l~~~~-~~~--~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~---~~~~~l~~al 395 (409)
T PLN00143 323 IPCIMCPQKAEGAFFALVKLNLLL-LED--I-EDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA---VEQSSLEDGL 395 (409)
T ss_pred CCCCCCCCCCCeeEEEEEecchhh-cCC--C-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc---CCHHHHHHHH
Confidence 765433334443 44455553210 000 0 0123444433 566766555555655678999996 4689999999
Q ss_pred HHHHHHHHHHhcc
Q 010842 484 ELIMEGADRLFKG 496 (499)
Q Consensus 484 ~~l~~~~~~l~~~ 496 (499)
+.|.++.++..+.
T Consensus 396 ~rl~~~l~~~~~~ 408 (409)
T PLN00143 396 GRLKSFCGRHAKK 408 (409)
T ss_pred HHHHHHHHHhccC
Confidence 9999988766554
No 102
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=3.8e-19 Score=180.30 Aligned_cols=335 Identities=13% Similarity=0.109 Sum_probs=207.4
Q ss_pred HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
.+.+...+... .+..++...++|++ +++++|.+.. ++++|||+|+..++.+..-.
T Consensus 13 ~~~v~~~~~~~--~~~~g~~~~~le~~----la~~~g~~~~---------v~~~sgt~al~~~l~al~~~---------- 67 (380)
T TIGR03588 13 IDAVVEVLKSD--FLTQGPTVPAFEEA----LAEYVGAKYA---------VAFNSATSALHIACLALGVG---------- 67 (380)
T ss_pred HHHHHHHHhcC--CccCChhHHHHHHH----HHHHHCCCeE---------EEEcCHHHHHHHHHHHcCCC----------
Confidence 33444445432 23446777778777 7788887653 77778999988887765211
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..|+++..+|.+...++...|+ +++.++++++ ++.+|+++|++++++.. ...+.+|+.++ .+|...|++
T Consensus 68 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~ 138 (380)
T TIGR03588 68 PGDRVWTTPITFVATANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQ 138 (380)
T ss_pred CCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHH
Confidence 467899999999999999999999 9999999764 47899999999997320 01123555443 579999999
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCC-ccC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTD-PEY 343 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~-~~y 343 (499)
+|+++|++||+++++|++|+.+..... +.. .....+|..++++| |++.++ ..|+++++++....+..... ...
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~--~~~-g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~ 214 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGG--KPV-GNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGI 214 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCC--EeC-CCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCC
Confidence 999999999999999999986643211 111 11123699999988 899766 56777777665432221100 000
Q ss_pred CCCCCCC---CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC----
Q 010842 344 LKNKPSE---SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---- 416 (499)
Q Consensus 344 l~~~~~~---~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---- 416 (499)
....... ......+....+....+...+.....+.. .+.+++++++..++++++.+.|+.+|+++++.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 292 (380)
T TIGR03588 215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS 292 (380)
T ss_pred CCCcccccccccCcceeeeeccccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe
Confidence 0000000 00000000001111223333433333333 36688999999999999999999998877553321
Q ss_pred -ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---Eeee----E----C----------CEEEEEEeccCCCC
Q 010842 417 -FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTI----V----G----------GLYMLRFAVGASLT 474 (499)
Q Consensus 417 -~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----------g~~~lRi~~~~~~~ 474 (499)
...+.+.+.... ....+++.+.|.++|+..- .+.. + . ....+++.+ ++..
T Consensus 293 ~~~~~~i~~~~~~-------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l 364 (380)
T TIGR03588 293 AWHLYPILLDQEF-------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPAL 364 (380)
T ss_pred EEEEEEEEECCcC-------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCC
Confidence 122333333210 0114567777777775321 1100 0 0 014577766 6889
Q ss_pred cHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEG 489 (499)
Q Consensus 475 t~~di~~l~~~l~~~ 489 (499)
|++||++++++|+++
T Consensus 365 ~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 365 TLEQQQRVVETLRKV 379 (380)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999875
No 103
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.86 E-value=2.1e-20 Score=186.94 Aligned_cols=334 Identities=12% Similarity=-0.016 Sum_probs=212.1
Q ss_pred cCCCCCChHHHHHHHHHHHc-c---cCCccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACF-N---SVGFNW---LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSI 166 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~-n---~~~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~ 166 (499)
+.|++...|..+-+.+...+ + .....+ ..++...++-+++.+.+++++|.+.+. ..+++ ++||.|+
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 56777777766666655443 1 111222 234555688888999999999985431 23444 5565554
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHH-HHHHHHHcC
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRR-AVEADVEAG 244 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~-~i~~~~~~g 244 (499)
-.+++..... |.+..+|..+...|.+ .+.++..|. . ..++.++ .+ ..+..++++ .|+++
T Consensus 81 Ea~~~nl~~~--------g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~~g--~~~~~~~~~~~l~~~---- 141 (360)
T PRK05355 81 AMVPMNLLGG--------GKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSEDDG--FTYIPPLDEWQLSDD---- 141 (360)
T ss_pred HHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccccC--CCCCCChhhccCCCC----
Confidence 4444433221 2123445544444444 567777787 5 5555553 33 455555555 55443
Q ss_pred CccEEEEEecCCCcccccC-ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842 245 LVPLFLCATVGTTSTTAVD-NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC 323 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id-~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g 323 (499)
+.+|.+++..|+||... ||.+| +|+.++||++.+.+....+- ...|.+++++||+++ |.|.|
T Consensus 142 --~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv--------~~~d~~~~ssqK~lg-P~Glg 204 (360)
T PRK05355 142 --AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV--------SKFGLIYAGAQKNIG-PAGLT 204 (360)
T ss_pred --CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCH--------HHccEEEEecccccc-CCceE
Confidence 34899999999999997 78877 89999999998776554331 125799999999986 99999
Q ss_pred EEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 010842 324 CLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFE 400 (499)
Q Consensus 324 ~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~ 400 (499)
+++++++.. .+ +.. .+.|+..... .......++... ....+..+++.+-.+ |++++.++..+++++++
T Consensus 205 ~l~~s~~~l-~~-~~~~~~~~~~~~~~-------~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~ 275 (360)
T PRK05355 205 IVIVREDLL-GR-ALPSIPSMLDYKTH-------ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLY 275 (360)
T ss_pred EEEECHHHH-hh-cccCCChHHHHHHH-------HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 999998643 22 211 1122211100 000001112111 235677788888778 89999999999999999
Q ss_pred HHHhcCCCeEEEcC--CCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842 401 GFVKSDPRFEIVVP--RHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER 477 (499)
Q Consensus 401 ~~L~~~~~~~~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~ 477 (499)
+.|++++.+..+.+ ... .+++|++... ....++.+.+.++|.++ .... ...+.+|+|+. +++|++
T Consensus 276 ~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~---------~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~~-~~nt~e 343 (360)
T PRK05355 276 DAIDSSDFYRNPVAPEDRSRMNVPFTLADE---------ELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASIY-NAMPLE 343 (360)
T ss_pred HHHHhCCCcccCCChhhcCCcEEEEEcCCh---------HHHHHHHHHHHHCCCcc-cCCC-CccCcEEEECC-CCCCHH
Confidence 99999974333322 233 4688876541 22356667778889765 2222 22367999995 889999
Q ss_pred HHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGAD 491 (499)
Q Consensus 478 di~~l~~~l~~~~~ 491 (499)
||++++++|+++.+
T Consensus 344 ei~~l~~~l~~~~~ 357 (360)
T PRK05355 344 GVQALVDFMKEFER 357 (360)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999765
No 104
>PRK08912 hypothetical protein; Provisional
Probab=99.86 E-value=4.9e-19 Score=180.02 Aligned_cols=314 Identities=13% Similarity=0.052 Sum_probs=206.1
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
..|....+..++++.+.+|+.+.+|.+.+. . ..++|+|+++|+..++.+..+ ++..|+++.++
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~ 120 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP-----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPL 120 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 456666677899999999999888864221 1 468999999988766665422 46678889999
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE 274 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~ 274 (499)
|..+..+++..|. +++.+|++.+ ++.+|+++|++.+.+.+ .+|+.+.++|+||.+-+ +++|.++|++
T Consensus 121 y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~ 190 (387)
T PRK08912 121 YDAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALLAEFCQR 190 (387)
T ss_pred chhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 9999999999999 9999998753 47899999999886543 36778899999999965 7779999999
Q ss_pred hCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
|++++++|.+|+.+.+........ ..+....+.++.+..|.++.| .-+|+++...+ .. +.+........
T Consensus 191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~l~~~~~~~~------ 262 (387)
T PRK08912 191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPP-LL-RVLAKAHQFLT------ 262 (387)
T ss_pred CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHH-HH-HHHHHHHhhcc------
Confidence 999999999997654321111111 122223467889999998854 45888887543 22 22211100000
Q ss_pred CCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-EEEEEecCCC
Q 010842 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-LVCFRLNPYP 428 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~ 428 (499)
+ .. ......+....+ ..+.+++..++..+.++++.+.|++. ++++. ++..+ .+++.+.+..
T Consensus 263 --------~--~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~ 326 (387)
T PRK08912 263 --------F--TT----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLG 326 (387)
T ss_pred --------c--cC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccC
Confidence 0 00 011112222222 23445677777888889999999987 67765 44433 4444554311
Q ss_pred CCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
. .....++.+++. +.|+.+..+..+. +..++|++++. +++++++.++.|.++.+
T Consensus 327 ~------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 327 L------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR 385 (387)
T ss_pred C------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 0 001345666664 4576554444332 24789999973 47889999988887654
No 105
>PRK07777 aminotransferase; Validated
Probab=99.86 E-value=3e-19 Score=181.64 Aligned_cols=327 Identities=15% Similarity=0.073 Sum_probs=212.3
Q ss_pred HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
-+.+...+......|...++..++++++.+|+.+.+|.+... ....++|+|+++|+..++.+..+
T Consensus 43 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~----------- 107 (387)
T PRK07777 43 LEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE----------- 107 (387)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------
Confidence 333444444334557667778999999999999988875321 01358999999998777664421
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--- 262 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--- 262 (499)
++..|+++...|..+..+++..|. .++.+|.+++ ++|.+|+++|++.+.+++ .+|+++.++|+||.+
T Consensus 108 ~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~ 178 (387)
T PRK07777 108 PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLTA 178 (387)
T ss_pred CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCCH
Confidence 456788888899999999999999 9999998865 357899999999886543 367788899999998
Q ss_pred CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 263 DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 263 d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
+++++|+++|+++++++++|.+|+.+.+........ ..+....+.+..+++|.++.| ..+|+++..++ +.+.+..
T Consensus 179 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--l~~~~~~ 256 (387)
T PRK07777 179 AELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAP--LIAAVRA 256 (387)
T ss_pred HHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHH--HHHHHHH
Confidence 458899999999999999999997654321111111 122233567889999999865 44788776542 2222221
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS--YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
...+.... . ......++... .+...+++..++..++++++.+.|++. ++++..+...
T Consensus 257 ~~~~~~~~----------------~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~ 315 (387)
T PRK07777 257 AKQYLTYV----------------G----GAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGT 315 (387)
T ss_pred HHhhcccC----------------C----CCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcc
Confidence 11111100 0 11111111111 234556677778888899999999886 6776533333
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..+++++.+.. .....++.+.|.+ .|..+..+..+. +..++|++++ .+++++++.++.|.++.
T Consensus 316 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~---~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 316 YFLCADPRPLG-------YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC---KRDDTLDEAIRRLRALR 384 (387)
T ss_pred eEEEecccccC-------CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec---CCHHHHHHHHHHHHHHh
Confidence 33444543211 0013567777754 565544433332 2458999996 36889999999988764
No 106
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=4.4e-19 Score=181.00 Aligned_cols=334 Identities=10% Similarity=0.053 Sum_probs=213.2
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|...++..++++.+.+|+.+..|..-+. ...++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~-------- 115 (398)
T PRK08363 49 EHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD-------- 115 (398)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhCC--------
Confidence 344455554443222345556778899999999988877753211 1468999999998877765532
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe-eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL-PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|..+...++..|. .++.+ +.+++ ++.+|+++|++.+.+++ .+|+++.++|+||.+
T Consensus 116 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~ 182 (398)
T PRK08363 116 ---PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEEE-GWQPDIDDIRKKITEKT------KAIAVINPNNPTGAL 182 (398)
T ss_pred ---CCCEEEEcCCCCcchHHHHHHcCC---EEEEecccccc-CCcCCHHHHHhhCCcce------EEEEEECCCCCCCcC
Confidence 567799999999999999999998 88887 55544 47899999999886543 367788999999998
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC-c-eeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV-D-SFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~~r~~~~l~~~ 336 (499)
-+ +++|+++|+++|+++++|++|+.+.+. +.... ...+... . .+..+..|+++ ....+|++++.++..+...
T Consensus 183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~ 260 (398)
T PRK08363 183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-GKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAE 260 (398)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-CcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHH
Confidence 66 899999999999999999999865332 11111 1111112 2 34568999954 4477899988332211111
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+......+... .. ....+...++...+ ..+.+++..++..+.++++.+.|+++|++++. +
T Consensus 261 l~~~~~~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 322 (398)
T PRK08363 261 VREAIDKLARI-------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-K 322 (398)
T ss_pred HHHHHHHHhcc-------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-C
Confidence 11000000000 00 01122233333333 24667777788888889999999988888754 5
Q ss_pred CCceEEEE-EecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCF-RLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 415 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
|..+.+.| ++.+.. . ....+++ +.+.++|+.+..+..+. +..++|++++ .+++++++.++.|+++.
T Consensus 323 p~g~~~~~~~l~~~~---~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 323 PQGAFYIFPRIEEGP---W----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDRFEEFM 392 (398)
T ss_pred CCeEEEEEEEeccCC---C----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 55566555 444310 0 0022333 44566776555444443 2468999995 46889999999998877
Q ss_pred HHH
Q 010842 491 DRL 493 (499)
Q Consensus 491 ~~l 493 (499)
++.
T Consensus 393 ~~~ 395 (398)
T PRK08363 393 RER 395 (398)
T ss_pred HHh
Confidence 653
No 107
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.3e-19 Score=182.02 Aligned_cols=339 Identities=12% Similarity=0.052 Sum_probs=214.9
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|....+..++.+++.+++.+.+|.+... ...++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~~~~-------- 115 (402)
T PRK06107 49 DHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD-----NEITVGGGAKQAIFLALMATLE-------- 115 (402)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC--------
Confidence 335566666554333456666677899999999999998874321 2468999999998877764321
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++.+.+..+..++...|. .++.++++.+++|.+|+++|++.+.+. +.+|+.+.++|+||.+-
T Consensus 116 ---~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 183 (402)
T PRK06107 116 ---AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVY 183 (402)
T ss_pred ---CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCc
Confidence 567788898888888888888887 788888865445789999999988543 33678888999999885
Q ss_pred ---ChhHHHHHHHHh-CCEEEeeccccchhccCccchhhh---cCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 264 ---NVEPLAEVANEY-GIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 264 ---~l~~I~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
.+++|+++|+++ ++++++|.+|+...+-.+...... .+...--.+..+.+|.++.| .-+|+++... ... +
T Consensus 184 s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-~~~-~ 261 (402)
T PRK06107 184 SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-DLI-A 261 (402)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-HHH-H
Confidence 467778889998 999999999975433211111111 12111234456679999755 4578877543 222 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....+.. .....+..+++...+ +...+++..+...+.++.+.+.|++++++.+.
T Consensus 262 ~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~- 320 (402)
T PRK06107 262 AINKLQSQSS--------------------SCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL- 320 (402)
T ss_pred HHHHHHHhcc--------------------cCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence 2222111110 011233444444444 34556677777788888899999888787765
Q ss_pred CCCceEEE-EEecCC-CCCCcchh-HHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFALVC-FRLNPY-PHSGSADT-EMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~~v~-f~~~~~-~~~~~~~~-~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+|..+.+. +++... +....+.. ......+.+.+ .+.|+.+..+..++...++|++++ .+++++++.++.|.++
T Consensus 321 ~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~---~~~e~l~~~l~~l~~~ 397 (402)
T PRK06107 321 VPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA---TSLETLEEACARIERA 397 (402)
T ss_pred CCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHH
Confidence 44444443 343210 00000000 00123455554 456766555555544578999997 3689999999999988
Q ss_pred HHHH
Q 010842 490 ADRL 493 (499)
Q Consensus 490 ~~~l 493 (499)
.+++
T Consensus 398 l~~~ 401 (402)
T PRK06107 398 VAAL 401 (402)
T ss_pred HHhc
Confidence 7654
No 108
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.86 E-value=6.4e-19 Score=158.82 Aligned_cols=300 Identities=15% Similarity=0.122 Sum_probs=215.5
Q ss_pred HHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEE
Q 010842 138 LATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRA 217 (499)
Q Consensus 138 la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~ 217 (499)
+++.+|++.. =+|.|+-+|-+..|.+... ++..|++...+||+..-|+...|+ +|..
T Consensus 70 laeFlg~D~~---------R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl---~v~e 126 (382)
T COG1103 70 LAEFLGMDEV---------RVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL---NVAE 126 (382)
T ss_pred HHHHhCCcee---------eecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---eEEe
Confidence 9999999875 7899999998877776543 577888899999999999999999 9999
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcC-CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccch
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAG-LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR 296 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~ 296 (499)
||....-.|.++++...+.|++-++++ ..|.+.+.|++....|.+.|.+.++++|+++|+++.+.+||..+-+.... +
T Consensus 127 Vp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~-k 205 (382)
T COG1103 127 VPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSG-K 205 (382)
T ss_pred cCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccc-c
Confidence 997655569999999999999987765 77999999999999999999999999999999999999999877543211 1
Q ss_pred hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHH
Q 010842 297 HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWM 375 (499)
Q Consensus 297 ~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~ 375 (499)
--++|+|+.|+||.+.+...||++.++.+-. ...+..+..+.....- --+.|+-|...+ .+.+
T Consensus 206 -----e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv----------ellGCT~rGapivTlmA 269 (382)
T COG1103 206 -----EIGADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV----------ELLGCTVRGAPIVTLMA 269 (382)
T ss_pred -----ccCCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee----------eeecccccCchHHHHHh
Confidence 1249999999999999888899999987532 2333333222222110 124566444433 2222
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCce-EEEEEecCCCCCCcchhHHHHHH-------HHHHH
Q 010842 376 VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFA-LVCFRLNPYPHSGSADTEMLNRK-------LLDWV 446 (499)
Q Consensus 376 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~-~v~f~~~~~~~~~~~~~~~~~~~-------l~~~l 446 (499)
++-. -.+.. ++++.-.+.+++|.+.|+++.|+..+.. |... .+.|..+. .+++.+. |.+.|
T Consensus 270 SfP~-V~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~--------f~eIakk~~r~gyFlY~EL 339 (382)
T COG1103 270 SFPH-VVERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPV--------FHEIAKKHKRKGYFLYEEL 339 (382)
T ss_pred cCHH-HHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCch--------HHHHHHhCcCCceeeHHHH
Confidence 2222 12332 3445567789999999999988887753 4333 33343322 1222222 45566
Q ss_pred HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++|+.-+.+ +-..++.+++ +..+.|+++..++++++++++
T Consensus 340 K~RgI~GI~~---G~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 340 KKRGIHGIQP---GQTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HhcCcccccc---CceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 6666433332 2235688887 668999999999999999875
No 109
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=5.1e-19 Score=179.92 Aligned_cols=295 Identities=13% Similarity=0.059 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
..+..++.+++++++|.+. .+++++|+++++.++.+..+ ++..|+++...|.+...++..
T Consensus 83 ~~~~~~l~~~la~~~~~~~---------~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAER---------ALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCCc---------EEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 4455666777899888543 37788889888776654321 566788899999999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|. .++.+|. .|++++++.+++.. ..+.+++.....|++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 998 8888764 38899999886521 1234566667788999999999999999999999999999965
Q ss_pred hhccC-ccchhhhcCCC-CCc-eeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccC
Q 010842 288 SACIC-PEFRHYLNGIE-RVD-SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 288 ~~~~~-~~~~~~~~g~~-~aD-si~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+.+.. ........++. ..| .+..+.||+++.+ | |+++.+ +... +.+. ....|....
T Consensus 210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~~-~~~~-~~~~~~~~~~~~~~---------------- 269 (385)
T PRK05958 210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLGS-ETLI-DYLINRARPFIFTT---------------- 269 (385)
T ss_pred cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEcC-HHHH-HHHHHhCccceecC----------------
Confidence 43221 10000011221 233 6678899999753 3 665443 3322 2221 111121110
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL 443 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~ 443 (499)
.+.......++.+++.+.. ..++.++..++++++.+.|++. ++++. ++..++++|.+.. .....++.
T Consensus 270 ~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~~~~ 336 (385)
T PRK05958 270 ALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD---------NERALALA 336 (385)
T ss_pred CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence 0001112233444544321 1567788889999999999886 56654 4566777777642 12356788
Q ss_pred HHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 444 DWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 444 ~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
++|.++|+.+..... ..+..++|+++. ..++++|++++++.|+++
T Consensus 337 ~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 337 AALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 888888865532111 124568999994 778999999999999765
No 110
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.85 E-value=9e-21 Score=188.25 Aligned_cols=229 Identities=21% Similarity=0.192 Sum_probs=160.9
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN 214 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~ 214 (499)
.+.+++.||.+.++ ++++|+|.+|..++.++.. ++..|++++++|.|+..++.+.|+ .
T Consensus 72 e~~aA~~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~ 129 (417)
T PF01276_consen 72 EELAARAFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---I 129 (417)
T ss_dssp HHHHHHHHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---E
T ss_pred HHHHHHhcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---e
Confidence 35699999999987 8889999999988888754 678899999999999999999999 9
Q ss_pred eEEeeCCCCCC---CccCH-----HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 215 IRALPTSVDAN---FSLSP-----QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 215 v~~v~~~~~~~---~~~d~-----~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
+++++...+.. ..+++ +.++++|++..... .|.+|++|.+|. .|.+-|+++|+++|+++++.|+||+|||
T Consensus 130 Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhG 207 (417)
T PF01276_consen 130 PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHG 207 (417)
T ss_dssp EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-
T ss_pred EEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEcccc
Confidence 99987752211 24566 99999998754322 155688888765 8999999999999999999999999999
Q ss_pred chhccCccchhhhcCCCCCc-------eeEecccccccCCCcceEEEEeCch-----hHHHhh----cCCccCCCCCCCC
Q 010842 287 GSACICPEFRHYLNGIERVD-------SFSFSPHKWLLSYLDCCCLWVKQPG-----LLVKAL----STDPEYLKNKPSE 350 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aD-------si~~~~hK~l~~p~~~g~l~~r~~~-----~l~~~~----~~~~~yl~~~~~~ 350 (499)
+.+.+.+-.+.... -+|| .++.|.||.+..-.+++++++++.. .+.+++ +..|+|+.-
T Consensus 208 ah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm---- 281 (417)
T PF01276_consen 208 AHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM---- 281 (417)
T ss_dssp TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH----
T ss_pred ccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH----
Confidence 98777643333221 2488 9999999999999999999999874 122222 233333211
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEEcC
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFV---KSDPRFEIVVP 414 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~~~~~ 414 (499)
..+-.+.+.+ +.+| ++++++..++++.+++.| .+++.|+++.+
T Consensus 282 --------------------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 282 --------------------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp --------------------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred --------------------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 2333444445 3344 567777888888888888 67788888754
No 111
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=5.8e-19 Score=180.83 Aligned_cols=296 Identities=13% Similarity=0.092 Sum_probs=190.9
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
++.+.+++++|.+.. +++++|++||..++...... .++.+|+++...|.++..+++..|.
T Consensus 95 ~Le~~la~~~g~~~~---------i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~-- 154 (410)
T PRK13392 95 LLERELADLHGKESA---------LLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA-- 154 (410)
T ss_pred HHHHHHHHHhCCCCE---------EEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC--
Confidence 344458999997543 77778899988887744211 0345788888899999888888888
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC 292 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~ 292 (499)
+++.++.+ |.+++++.++... ...+.+|+++.++|++|.+-|+++|.++|+++|+++++|+||+.+.+ .
T Consensus 155 -~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g 223 (410)
T PRK13392 155 -EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-G 223 (410)
T ss_pred -eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-C
Confidence 77776532 5667777775432 12355889999999999999999999999999999999999984432 1
Q ss_pred ccchhh--hcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842 293 PEFRHY--LNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK 369 (499)
Q Consensus 293 ~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 369 (499)
+..... ..+ .++.|.++.+.+|+++.+. |++.. +++..........+|..... ..+..
T Consensus 224 ~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~----------------~~~~~ 284 (410)
T PRK13392 224 ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTA----------------LPPAV 284 (410)
T ss_pred CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCc----------------CCHHH
Confidence 211111 112 2357888889999998753 55544 33332211122222221110 00011
Q ss_pred cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-h
Q 010842 370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-S 448 (499)
Q Consensus 370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~ 448 (499)
+..+..+++.+ +...+..++..++++++.+.|++. ++++. ++..+++.+.+.. .....++.++|. +
T Consensus 285 ~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~---------~~~~~~~~~~L~~~ 351 (410)
T PRK13392 285 AAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD---------PTLCKAISDRLMSE 351 (410)
T ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------HHHHHHHHHHHHHh
Confidence 22333444433 222344567788889999999887 77765 4555666554432 123467788886 4
Q ss_pred cCCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 449 TGRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 449 ~g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+|+. +.+.. ..+..++|+++ +...|++|+++++++|.++.+++
T Consensus 352 ~GI~-v~~~~~p~~~~~~~~lRis~-~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 352 HGIY-IQPINYPTVPRGTERLRITP-TPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCEE-EeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHHc
Confidence 5754 33321 23557899999 47889999999999999987654
No 112
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=3.2e-19 Score=181.25 Aligned_cols=325 Identities=11% Similarity=0.076 Sum_probs=212.3
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|....+...+++++.+++.+++|.+... ....++|+|+++|+..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~--------- 113 (386)
T PRK09082 47 YLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR--------- 113 (386)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC---------
Confidence 34455555554334456666778899999999999999875320 01368899999998887765532
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-- 262 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-- 262 (499)
++..|+++..+|.++..+++..|. +++.+|++.+ ++.+|++++++.+.+++ .+|+++.++|+||.+
T Consensus 114 --~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 114 --PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPRT------RLIILNTPHNPSGTVWS 181 (386)
T ss_pred --CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCccc------eEEEEeCCCCCCCcCCC
Confidence 567788999999999999999999 9999999754 48999999999986543 367788899999987
Q ss_pred -CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 263 -DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 263 -d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
+++++|.++|++||+++++|.+|+.+.+........ ..+...-..+..+..|.++.| .-+|+++..+ +.+ +.+.
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~-~l~-~~~~ 259 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA-ALS-AEFR 259 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH-HHH-HHHH
Confidence 788999999999999999999997654321111111 122222346677889998755 4578887643 322 2222
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
....+... ....+..+++...+ ..+.+++..+...++++++.+.|++. ++++. ++.
T Consensus 260 ~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~ 317 (386)
T PRK09082 260 KVHQYNTF--------------------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCE 317 (386)
T ss_pred HHHhhhcC--------------------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCC
Confidence 21111000 01122222222222 34556666777778888899999875 67754 455
Q ss_pred ceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 417 FAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 417 ~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.+. +++++.... +....++.+.|. +.|..+..+..+. +..++|++++ .+++++++.+++|++
T Consensus 318 g~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~---~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 318 GTYFQLVDYSAIS-------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA---KQEETLDAAAERLCQ 385 (386)
T ss_pred eeEEEEEeccccC-------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence 454 444553210 001345666654 4465444333342 2468999996 268889999988865
No 113
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.85 E-value=9.6e-19 Score=175.39 Aligned_cols=322 Identities=11% Similarity=0.040 Sum_probs=206.0
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
+.+.+..... ....|....+...+++++.+|+.+..|.+-+. . ..++|+|+++|+..++.+..+.
T Consensus 18 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~-------- 83 (350)
T TIGR03537 18 IRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP-------- 83 (350)
T ss_pred HHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC--------
Confidence 4444444332 23456555667899999999999888864321 1 4688999999887776655321
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
|.++..|+++.++|..+..+++.+|+ +++.||++.+++|.+|++++++++.++++ +|+++.++||||.+-+
T Consensus 84 g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~~------~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 84 EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEETK------IVWINYPHNPTGATAP 154 (350)
T ss_pred CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhccE------EEEEeCCCCCcCcccC
Confidence 11235788899999999999999999 99999997544588999999999876543 6778889999999977
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
+++|+++|+++|+++++|++|+...... ....... +.+ -..+..+.+|.++.| .-.|+++. ++... ..+..
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~~~ 230 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVGIE-NVLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFLRK 230 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcCcC-CEEEEeecccccCCccccceeeec-CHHHH-HHHHH
Confidence 8899999999999999999997643211 1111111 111 124555889998655 34677654 33322 22221
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
...+.. .+. ..+...++...+ ..+.+++..++..++.+.+.+.|++. ++++. +|..+
T Consensus 231 ~~~~~~------------------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~ 288 (350)
T TIGR03537 231 LRANFG------------------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDAT 288 (350)
T ss_pred HHHhhc------------------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeE
Confidence 111110 000 011112222222 23445666677777888888888886 77655 44444
Q ss_pred E-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 419 L-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 419 ~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
. +.+.+.+.. ...++.+.|.++|+.+..+..+. +..++|++++ .+++++++.++.|++
T Consensus 289 ~~~~~~~~~~~---------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 289 FYLWVKVPSGI---------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER 349 (350)
T ss_pred EEEEEECCCCC---------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence 3 444443310 13567788888886554444342 2468999985 467889999888765
No 114
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.85 E-value=4.4e-19 Score=179.94 Aligned_cols=324 Identities=12% Similarity=0.121 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...++.. ...|....+..+++ +++++++|.+.+ ..++|+|+|+|+..++.+...
T Consensus 43 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr----~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------ 105 (380)
T PRK06225 43 HEEVREAMIRCIEEGEYCKYPPPEGFPELR----ELILKDLGLDDD-------EALITAGATESLYLVMRAFLS------ 105 (380)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCcchHHHH----HHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC------
Confidence 334455555555432 12332222334444 558888888654 469999999998888776532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|++++.+|..+..++...|. .++.+|++. .++|.+|+++|++.+.++++ +|+++.++|+||
T Consensus 106 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NptG 171 (380)
T PRK06225 106 -----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDENTR------LIYLIDPLNPLG 171 (380)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCCce------EEEEeCCCCCCC
Confidence 455688888888888889999999 999999753 33478999999998865443 677788999999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
.+ +++++|+++|+++|+++++|++|+.+....+.... . ......+..++.|+++.| ..+|+++.++. .. +.
T Consensus 172 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~-l~-~~ 246 (380)
T PRK06225 172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAE-Y--APEHTVTSYSFSKIFGMAGLRIGAVVATPD-LI-EV 246 (380)
T ss_pred cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhh-c--CCCCEEEEeechhhcCCccceeEEEecCHH-HH-HH
Confidence 97 45999999999999999999999754321111000 0 112345566778999744 34788887543 22 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-c
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-V 413 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~ 413 (499)
+... .... + ....+...++...+ ..+.+++..+...++.+.+.+.|++++++.+. .
T Consensus 247 ~~~~---~~~~------------~------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 305 (380)
T PRK06225 247 VKSI---VIND------------L------GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVY 305 (380)
T ss_pred HHHH---Hhcc------------c------CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccC
Confidence 2110 0000 0 00122222222222 12333444444556677788888887775432 2
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
++..+.+.+.+.+.. ....++.++|.++|+.+..+..+ .+..++|+++. .++++++++++.|+++.
T Consensus 306 ~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~---~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 306 PSHGNMMVIDISEAG--------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS---IPREQVEVFCEEFPDVV 374 (380)
T ss_pred CCCCeEEEEEccccc--------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC---CCHHHHHHHHHHHHHHH
Confidence 445556655554321 01356777777778544332211 23468999985 37899999999999988
Q ss_pred HHHh
Q 010842 491 DRLF 494 (499)
Q Consensus 491 ~~l~ 494 (499)
+++.
T Consensus 375 ~~~~ 378 (380)
T PRK06225 375 ETLR 378 (380)
T ss_pred HHhh
Confidence 7654
No 115
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=4.8e-19 Score=177.41 Aligned_cols=283 Identities=14% Similarity=0.076 Sum_probs=191.3
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++.+++++|.+.+ ..++|+|+|+++..++.+..+ ++..|+++..+|..+...++..|+
T Consensus 59 lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~--- 117 (346)
T TIGR01141 59 LKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA--- 117 (346)
T ss_pred HHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC---
Confidence 44448888887543 358899999887666655422 456788888888878888899999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhcc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACI 291 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~ 291 (499)
+++.+|++++ +.+|+++|++.+.+++ .+|+.+.++|+||.+-|++++.++|+.+ ++++++|++|+.+...
T Consensus 118 ~~~~~~~~~~--~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~ 189 (346)
T TIGR01141 118 EVVKVPLDED--GQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE 189 (346)
T ss_pred eEEEeccCCC--CCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC
Confidence 9999998764 5899999999764433 3788889999999999999999999887 9999999999754321
Q ss_pred CccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc
Q 010842 292 CPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS 370 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 370 (499)
+.......... .+.+..+.+|+++.| ..+|+++.+. ..+ +.+...... ++ ...
T Consensus 190 -~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~-~~~~~~~~~----------------~~------~~~ 243 (346)
T TIGR01141 190 -PSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYAIANA-EII-DALNKVRAP----------------FN------LSR 243 (346)
T ss_pred -ccHHHHHhhCC-CEEEEehhhHhhhchhhhceeeecCH-HHH-HHHHhccCC----------------CC------CCH
Confidence 11111122221 235567889999654 4588888753 322 222211000 00 012
Q ss_pred HHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 371 LRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 371 l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+...++...+.. ..+++..++..++++++.+.|++++++++. ++....+++.+.. . .+++.++|.++
T Consensus 244 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~----------~~~~~~~L~~~ 311 (346)
T TIGR01141 244 LAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D----------ADALFEALLEK 311 (346)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C----------HHHHHHHHHHC
Confidence 233333333322 246777888889999999999988888854 4455666666543 1 45677888888
Q ss_pred CCEEEEeeeECC-EEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 450 GRVYLTHTIVGG-LYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 450 g~~~~~~~~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
|+.+.....+.+ ..++|+++. +++|+++++++|+
T Consensus 312 gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 312 GIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred CeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 865444333322 578999974 7899999998873
No 116
>PLN02231 alanine transaminase
Probab=99.85 E-value=3.6e-18 Score=178.54 Aligned_cols=334 Identities=14% Similarity=0.108 Sum_probs=219.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
...|..+.+...+.+.+.+|+.+..|.+.+. .+.++|+|+++|+..++.+.... ++..|+++.++
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p-----e~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc-----ccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 3568888889999999999999888875331 25789999999988887766421 46678899999
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANE 274 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~ 274 (499)
+..+..++...|. .++.++++++++|.+|+++|++++++....+..+.+|+++.++||||.+ +.+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999876568999999999998765555556678888999999999 567889999999
Q ss_pred hCCEEEeeccccchhccC-ccc---hhhhc--CCC--CCceeEe-ccccccc--CCCcceEEEEe--CchhHHHhhcCCc
Q 010842 275 YGIWVHVDAAYAGSACIC-PEF---RHYLN--GIE--RVDSFSF-SPHKWLL--SYLDCCCLWVK--QPGLLVKALSTDP 341 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~-~~~---~~~~~--g~~--~aDsi~~-~~hK~l~--~p~~~g~l~~r--~~~~l~~~~~~~~ 341 (499)
||+|+++|.+|....+.. +.+ ..... +.. ....+++ +..|.++ ...-+|++.+. +++.. +.+....
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~-~~l~k~~ 381 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR-EQIYKVA 381 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH-HHHHHHH
Confidence 999999999998764421 111 11111 111 1124444 7899653 34668888763 33322 2221110
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHHHH-------HHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVLNL-------QSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~-------~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
. ... ++ ..+...++...+ |...+ .++.+...+.++++.+.|++++++
T Consensus 382 ~-~~~-----------------~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi 440 (534)
T PLN02231 382 S-VNL-----------------CS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV 440 (534)
T ss_pred h-hhc-----------------CC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 0 000 11 112222222222 11222 234566778888999999998888
Q ss_pred EEEcCCCceEEEE-Eec-CCCCCCcch-hH-HHHHHHHHHHH-hcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHH
Q 010842 410 EIVVPRHFALVCF-RLN-PYPHSGSAD-TE-MLNRKLLDWVN-STGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 410 ~~~~~~~~~~v~f-~~~-~~~~~~~~~-~~-~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~ 481 (499)
++. +|+.+.+.| ++. +....+... .+ .....++.+|. +.|++++.+..+. +..++|+++. .+++++++
T Consensus 441 ~~~-~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~---~~~e~l~e 516 (534)
T PLN02231 441 TCN-KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL---PQEDKIPA 516 (534)
T ss_pred eec-CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC---CCHHHHHH
Confidence 865 666666666 332 110000000 00 00123445555 4587666666554 3457999985 68899999
Q ss_pred HHHHHHHHHHHHhc
Q 010842 482 AWELIMEGADRLFK 495 (499)
Q Consensus 482 l~~~l~~~~~~l~~ 495 (499)
.++.|.++.+++.+
T Consensus 517 al~RL~~~~~~~~~ 530 (534)
T PLN02231 517 IVSRLTEFHKSFMD 530 (534)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887654
No 117
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-18 Score=178.13 Aligned_cols=321 Identities=12% Similarity=0.009 Sum_probs=212.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
.|.. ++...+.+++.+|+.+.+|.. -+. ....++|+|+++++..++.+..+ ++..|+++.+++
T Consensus 77 ~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~-----------~gd~Vlv~~P~y 140 (410)
T PRK06290 77 GYAD-NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN-----------PGDVTLMTVPGY 140 (410)
T ss_pred CCCC-CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC-----------CCCEEEEeCCCC
Confidence 3543 677899999999999888864 210 00368899988987776665432 567788899999
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY 275 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~ 275 (499)
..+...++..|. +++.||++++++|.+|+++|++.+.+.+ .+|+++.++||||.+-+ +++|.++|++|
T Consensus 141 ~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~ 211 (410)
T PRK06290 141 PVTGTHTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEKA------KLLYLNYPNNPTGAVATKEFYEEVVDFAKEN 211 (410)
T ss_pred ccHHHHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhcccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 999999999999 9999999876668899999998886533 37888889999999966 67888889999
Q ss_pred CCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
|+|+++|.+|+.+.... ..... +.+....+.+..+..|.++.| .-+|+++.. +..+ ..+.....+...
T Consensus 212 ~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~~l~-~~l~~~~~~~~~------ 282 (410)
T PRK06290 212 NIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-ELIV-KAFATVKDNNDS------ 282 (410)
T ss_pred CeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-HHHH-HHHHHHHhcccc------
Confidence 99999999998754321 11111 111223457788899999655 457887753 3322 222211111100
Q ss_pred CcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE-EecCCCCC
Q 010842 353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF-RLNPYPHS 430 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~ 430 (499)
....+...++...+. .+.+++..++..+.++++.+.|++. ++.+. +|+.+.+.| ++++.. .
T Consensus 283 --------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~-~ 345 (410)
T PRK06290 283 --------------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGT-K 345 (410)
T ss_pred --------------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCcc-c
Confidence 001122233333332 2345666777788888999999887 77755 455555544 544310 0
Q ss_pred CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
... ......++.++|.++|.+++.+.... ..++|++++.+..++++.++++++|.+...++
T Consensus 346 ~~~-~~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 346 SGI-KFENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred cCC-CCCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 000 00114567888888887655442211 24799999888889999999999999887765
No 118
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.85 E-value=9.2e-19 Score=188.53 Aligned_cols=365 Identities=11% Similarity=0.052 Sum_probs=234.7
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHH-------HHHHHHcccCCccccc
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLG-------EMLCACFNSVGFNWLA 123 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~~~~~~ 123 (499)
|++++..-+..|| ++.++.++++++.++...|.. ...|.|.-..+..+|+.+- +|+++ +.+++...++
T Consensus 31 P~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Ta-ytPyQ~EisQ 105 (939)
T TIGR00461 31 PPNILKRRPLQLE-APSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTA-YTPYQPEISQ 105 (939)
T ss_pred CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhc-CCCCChhhhh
Confidence 5566655456777 467999999999998776654 3346553333344455554 23333 3455555556
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+.....+|.+ .++++|+|++.. +..+..++|.+.- ++..++.... + ++.+|++++..|+....
T Consensus 106 G~Le~l~e~Q--t~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~~------~-~~~~vlv~~~~hP~~~~ 168 (939)
T TIGR00461 106 GRLEALLNFQ--TVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVSK------K-KANKFFVAKDLHPQTKS 168 (939)
T ss_pred HHHHHHHHHH--HHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhhc------C-CCCEEEECCCCCcchHH
Confidence 6666666666 669999999865 3477787775433 3333332110 0 23569999999988664
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
. +...|+ +++.++ +++|++.+ + .+.|+++.+++ +|.+.|+++|++++|++|.++
T Consensus 169 v~~t~a~~~g~---~v~~~~----------~~~l~~~~--~------~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~ 226 (939)
T TIGR00461 169 VLHTRAKPFGI---EVIVVD----------CSDIKKAV--D------VFGCLLQYPAT-DGSILDYKQLIDALHSHKSLV 226 (939)
T ss_pred HHHHHHHhcCc---EEEEEc----------HHHHhhcC--C------EEEEEEECCCC-CeEEecHHHHHHHHHHcCCEE
Confidence 4 357788 887773 33455554 2 24566666654 899999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEeccccccc-----CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-----SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-----~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
++++-.-...++.+. |--+||.++.+.++|+. +| ..|++.+++. +.+ ..|+-+.+...+..+.
T Consensus 227 ~~~ad~~al~ll~~P------ge~GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~--l~r---~lPgrivG~s~D~~G~ 294 (939)
T TIGR00461 227 SVAADLMALTLLTPP------GHYGADIVLGSSQRFGVPMGYGGP-HAAFFAVKDE--YNR---KMPGRIVGVSKDALGN 294 (939)
T ss_pred EEEechHHhCCcCCH------HHcCCcEEeeCCCccCCCCCCCCC-ceeeeeecHh--hHh---hCCCCceeEEecCCCC
Confidence 996543332222211 11149999777776663 44 3899999874 222 2344444322222221
Q ss_pred ccCCC---cccCCCCCCCc------------HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842 355 VDFKD---WQVGTGRRFKS------------LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419 (499)
Q Consensus 355 ~~~~~---~~~~~sr~~~a------------l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 419 (499)
..+.- ..-|.-||-.| +...+.+.++|.+|++++.++...++.++.+.|++ .|++++.++.+..
T Consensus 295 ~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~~ 373 (939)
T TIGR00461 295 TALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFDT 373 (939)
T ss_pred ccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccce
Confidence 11110 00122233211 22233467789999999999999999999999998 6999988888888
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+.+++.... .+++.+++.++|+.+ .. .....+++|+ +..+|++||+.+++.+.
T Consensus 374 ~~v~~~~~~----------~~~i~~~~~~~gi~l-~~---~~~~~i~~s~-~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 374 LTVKVGNGI----------SSELLKAAEEFNINL-RA---VDTTTVGIAL-DETTTKADVENLLKVFD 426 (939)
T ss_pred EEEEeCCCC----------HHHHHHHHHHCCCee-ee---cCCCEEEEEe-ecCCCHHHHHHHHHHhc
Confidence 888874222 467888888889652 22 1224699999 49999999999999994
No 119
>PRK12414 putative aminotransferase; Provisional
Probab=99.85 E-value=3.3e-19 Score=180.99 Aligned_cols=327 Identities=10% Similarity=0.091 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
+..+.+.+...+......|....+...+.+++.+|+++++|.+... ....++|+|+++|+..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~------- 112 (384)
T PRK12414 44 DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH------- 112 (384)
T ss_pred CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC-------
Confidence 3344454444332223456566678899999999999999985210 01368999999988777765432
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|..+...++..|. +++.||++++ ++.+|++.|++++++++ .+|+++.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~------~~v~i~~p~NPTG~~ 178 (384)
T PRK12414 113 ----PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPRT------RMIIVNTPHNPSATV 178 (384)
T ss_pred ----CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCccc------EEEEEcCCCCCCCcC
Confidence 567788899999999999999999 9999998754 47899999999886533 377788999999998
Q ss_pred ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
+++++|+++|++||+|+++|++|..+.+......... .+...--.++.+..|.++.| .-+|++...++ .. +.
T Consensus 179 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l~-~~ 256 (384)
T PRK12414 179 FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAE-LM-DE 256 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHH-HH-HH
Confidence 6789999999999999999999976543211111111 11111236778899998755 55788877543 22 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
+.....+. ......+..+++...+.. ..+.+..+...+.++++.+.|++. ++++. ++
T Consensus 257 l~~~~~~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~ 314 (384)
T PRK12414 257 IRKVHQFM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PS 314 (384)
T ss_pred HHHHHhhe--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CC
Confidence 21111100 001122334444444421 233445566677888899999887 67765 45
Q ss_pred CceEEEE-EecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeeeEC--C--EEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 416 HFALVCF-RLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTIVG--G--LYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 416 ~~~~v~f-~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g--~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
..+.+.| ++.+.. + ....++. +.+.+.|+.+..+..+. + ..++|++++ .+++++++.++.|.+
T Consensus 315 ~gg~~~~~~~~~~~---~----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 315 EGSFFMLARFRHFS---D----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS---KDDATLVEGARRLCS 383 (384)
T ss_pred CcceEEEEcccccC---C----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence 4454444 453210 0 0123344 44556787665544442 2 468999997 358889988888764
No 120
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.85 E-value=1.3e-18 Score=177.86 Aligned_cols=296 Identities=14% Similarity=0.136 Sum_probs=191.4
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++.+.+++++|.+.. +++++|++||..++..++... ++.+|+++...|.++...+...|.
T Consensus 93 ~~Le~~la~~~g~~~~---------l~~~sG~~an~~ai~~l~~~~---------~~~~v~~~~~~h~s~~~~~~~~g~- 153 (402)
T TIGR01821 93 VELEAELADLHGKESA---------LVFTSGYVANDATLATLAKII---------PGCVIFSDELNHASMIEGIRHSGA- 153 (402)
T ss_pred HHHHHHHHHHhCCCeE---------EEECchHHHHHHHHHHhhCCC---------CCCEEEEcchHhHHHHHHHHHcCC-
Confidence 3444458899986543 888889999999988765321 345677777789999988888887
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~ 291 (499)
.+..++. .|+++|++.++... ...+.+|++..+++++|.+.|+++|.++|++||++++||+||+.+.+
T Consensus 154 --~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~- 221 (402)
T TIGR01821 154 --EKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY- 221 (402)
T ss_pred --eEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-
Confidence 6665542 37888988886421 12355788899999999999999999999999999999999984422
Q ss_pred Cccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 292 CPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 292 ~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.+..... ..++ ...|.+.....|.++.+. |+++.++ + +.+.+.. ...|.+.. ...+
T Consensus 222 g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~~~-~-~~~~l~~~~~~~~~t~----------------~~~~ 281 (402)
T TIGR01821 222 GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAASR-K-LIDAIRSYAPGFIFTT----------------SLPP 281 (402)
T ss_pred CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeecCH-H-HHHHHHHhCcCceecC----------------cCCH
Confidence 1211111 1122 246888889999998643 5555443 2 2222221 11221110 0000
Q ss_pred CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
..+..+..+++.+... ..+.++..++++++.+.|++. +++++ ++..+++.+.+.. .....++.++|.
T Consensus 282 ~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~~---------~~~a~~~~~~L~ 348 (402)
T TIGR01821 282 AIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIGD---------AALCKKVSDLLL 348 (402)
T ss_pred HHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHHHHHHH
Confidence 1122233344433222 444556678899999999886 77665 3455666665432 123466778876
Q ss_pred hc-CCEEEEee----eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 448 ST-GRVYLTHT----IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 448 ~~-g~~~~~~~----~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++ |+ ++.+. ...+..++|+++ +...|++||++++++|+++.+++
T Consensus 349 ~~~Gi-~v~~~~~p~~~~g~~~lRis~-~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 349 NKHGI-YVQPINYPTVPRGTERLRITP-TPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred hcCCE-EEEeECCCCCCCCCceEEEEe-CCCCCHHHHHHHHHHHHHHHHHc
Confidence 55 64 44432 223556899999 48899999999999999988764
No 121
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.4e-18 Score=175.70 Aligned_cols=329 Identities=16% Similarity=0.123 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
|..+.+.+..... ....|....+..++.+++.+++.+ .|.+... ...++|+|+|+|+..++.+..+
T Consensus 45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 110 (397)
T PRK07568 45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEP-----DEILITNGGSEAILFAMMAICD------- 110 (397)
T ss_pred CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc-----ceEEEcCChHHHHHHHHHHhcC-------
Confidence 3444555554433 233455556678888887777763 3442111 1468999999998877665422
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCcc-CHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSL-SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~-d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.+.|..+...++..|+ +++.||++.+.++.+ ++++|+++++++++ +|+.+.++|+||.
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~------~v~i~~p~NPtG~ 177 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKTK------AILISNPGNPTGV 177 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccce------EEEEECCCCCCCc
Confidence 456788888888778788889999 999999874333443 68999998865443 6888899999999
Q ss_pred cC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccC-CCcceEEEEeCchhHHH
Q 010842 262 VD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~ 335 (499)
+- ++++|+++|+++|+++++|++|+.+....+....... +...--.++.+.+|.++. ...+|+++..++.....
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~ 257 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAA 257 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHH
Confidence 85 4789999999999999999999876432111111111 111112456688999875 46688888765543322
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
........+ ....+...++...+ +.+.+++..+...+.++.+.+.|++++++.+.
T Consensus 258 ~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 314 (397)
T PRK07568 258 AMKLCQARL----------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE- 314 (397)
T ss_pred HHHHhhccC----------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-
Confidence 211110000 00122223332332 34566777777888889999999988777654
Q ss_pred CCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh------cCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHH
Q 010842 414 PRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS------TGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 414 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~ 481 (499)
.|..+. +++++.... ..++.+.+.+ .|+.+..+..+. +..++|++++ .+++++++
T Consensus 315 ~p~g~~~~~~~l~~~~----------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~---~~~~~~~~ 381 (397)
T PRK07568 315 KPKGAFYIIAKLPVDD----------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV---LNEEDLKR 381 (397)
T ss_pred CCCcceEEEEecCCCC----------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe---CCHHHHHH
Confidence 444443 445554311 2344444443 455444433331 2368999985 35799999
Q ss_pred HHHHHHHHHHHHh
Q 010842 482 AWELIMEGADRLF 494 (499)
Q Consensus 482 l~~~l~~~~~~l~ 494 (499)
.++.|.++.++..
T Consensus 382 ~~~~l~~~l~~~~ 394 (397)
T PRK07568 382 AMEILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887754
No 122
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.7e-18 Score=176.05 Aligned_cols=333 Identities=14% Similarity=0.096 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCc-cccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 103 AGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKT-FMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 103 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~-~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
|..+.+.+...+. .....|....+...+.+++.+++++.+|.+.+ . ...++|+|+++++..++.+..+
T Consensus 42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~----- 111 (389)
T PRK05957 42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNE-----QAIVVTAGSNMAFMNAILAITD----- 111 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CeEEEeCChHHHHHHHHHHhcC-----
Confidence 3445555555443 22345666677788999999999999997421 0 1368899998988776665432
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.+.|......++..|+ +++.+|.+. ++.+|+++|++.++++++ +|++++++|+||
T Consensus 112 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~k------lv~~~~p~NPtG 174 (389)
T PRK05957 112 ------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKTR------AIVTISPNNPTG 174 (389)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCce------EEEEeCCCCCCC
Confidence 566788888888888888888999 999999864 468999999999865443 778889999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
.+-| +++|+++|+++|+++++|++|+.+........... .....-..++.+..|.++.| .-+|+++..++ +.
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--~~ 252 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH--LL 252 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH--HH
Confidence 9977 88999999999999999999986643211111111 11111224556678988655 34888887543 22
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
+.+.....+.... ...+...++...+ +...+++..++..++++++.+.|++++++..+
T Consensus 253 ~~~~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 312 (389)
T PRK05957 253 EAIKKIQDTILIC--------------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTL 312 (389)
T ss_pred HHHHHHHhhcccC--------------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 2222111110000 0123334434444 33456777778888889999999988775223
Q ss_pred cCCCceEEE-EEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 413 VPRHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 413 ~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.+|..+.++ +++.+.- + ..++.+++.+ .|+.+..+..+. +..++|++++. .+++++++.++.|.+
T Consensus 313 ~~~~gg~~~~~~~~~~~-------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~~l~~ 381 (389)
T PRK05957 313 HPANGAFYCFLKVNTDL-------N--DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIERLVQ 381 (389)
T ss_pred cCCCeeEEEEEeCCCCC-------C--hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--CCHHHHHHHHHHHHH
Confidence 455544433 4443211 1 3567777764 676554443332 24589999953 468889999999988
Q ss_pred HHHHHhc
Q 010842 489 GADRLFK 495 (499)
Q Consensus 489 ~~~~l~~ 495 (499)
..+.+..
T Consensus 382 ~~~~~~~ 388 (389)
T PRK05957 382 GLKTIVQ 388 (389)
T ss_pred HHHhhhc
Confidence 8877653
No 123
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.85 E-value=2.3e-18 Score=175.90 Aligned_cols=341 Identities=10% Similarity=0.016 Sum_probs=214.8
Q ss_pred hHHHHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
++..+.+.+...++... ..|...++..++.+++.+++.+. |.+-.. ...++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~-----~~i~~t~G~~~al~~~~~~l~~----- 117 (401)
T TIGR01264 49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEA-----DDVVLCSGCSHAIEMCIAALAN----- 117 (401)
T ss_pred CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCH-----HHEEECcChHHHHHHHHHHhCC-----
Confidence 34455566665555432 34656677788888877777653 332110 1468999999998877766532
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.+++..+...++..|+ .++.++++.++++.+|++.|++.+.+.+ .+|+++.++||||
T Consensus 118 ------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG 182 (401)
T TIGR01264 118 ------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCG 182 (401)
T ss_pred ------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCC
Confidence 456788888899899999999999 9999998765568999999998876543 2678889999999
Q ss_pred ccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC-ceeEecccccccCC-CcceEEEEeCch-hHH
Q 010842 261 AVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV-DSFSFSPHKWLLSY-LDCCCLWVKQPG-LLV 334 (499)
Q Consensus 261 ~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~-~l~ 334 (499)
.+- ++++|+++|+++|+++++|++|..+............-.... -.++.+..|.++.| .-+|+++..++. .+.
T Consensus 183 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~ 262 (401)
T TIGR01264 183 SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR 262 (401)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH
Confidence 994 588999999999999999999987643211111111111111 24567789975444 668998876431 111
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
+.......+ .... + ....+...++...+ ..+.+++..++..+.++++.+.|++.|++..
T Consensus 263 ~~~~~~~~~-~~~~-----------~------~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~ 324 (401)
T TIGR01264 263 DIRDGLVKL-SQRI-----------L------GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRP 324 (401)
T ss_pred HHHHHHHHH-hhcc-----------C------CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 111100000 0000 0 00122223333322 2355677777888888899999998877765
Q ss_pred EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..+...+.+.+++..... .+ .....++.+++. +.|+.+..+..+....++|++++ .+++++++.+++|.++.
T Consensus 325 ~~p~~g~f~~~~~~~~~~-~~---~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 325 VMPSGAMYMMVGIEMEHF-PE---FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT---VPVVMMEEACSRIQEFC 397 (401)
T ss_pred cCCCeeeEEEEEeccccc-CC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc---CCHHHHHHHHHHHHHHH
Confidence 444454555555532100 00 001345666665 56765554444544578999996 35788999999998887
Q ss_pred HHH
Q 010842 491 DRL 493 (499)
Q Consensus 491 ~~l 493 (499)
+++
T Consensus 398 ~~~ 400 (401)
T TIGR01264 398 ERH 400 (401)
T ss_pred hcc
Confidence 653
No 124
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=2.2e-18 Score=175.33 Aligned_cols=334 Identities=13% Similarity=0.125 Sum_probs=209.1
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|....+..++++.+.+++.+.+|.+... ....++|+|+++|+..++.+...
T Consensus 46 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~-------- 113 (391)
T PRK07309 46 DHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE-------- 113 (391)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC--------
Confidence 334444444443222345555667899999999998888863110 01468999999998887775532
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++.++|..+..+++..|. +++.+|.+++ +|.+|+++|++++++.. ..+.+|+.+.++||||.+-
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~ 183 (391)
T PRK07309 114 ---PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTY 183 (391)
T ss_pred ---CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCc
Confidence 466788888999999999999999 9999998754 37899999999986421 1244788888999999974
Q ss_pred ---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 264 ---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 264 ---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
++++|+++|++||+++++|++|+.+....+.......-...--.+..+..|.++.| ..+|+++... +.+. .+..
T Consensus 184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~-~~~~ 261 (391)
T PRK07309 184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA-EFTA-QLIK 261 (391)
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH-HHHH-HHHH
Confidence 58999999999999999999998764322111111111111235677899998755 4477777653 3332 2211
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
...|.... ...+...++...+ +........++..+.++++.+.|++. ++++. +|..
T Consensus 262 ~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~g 319 (391)
T PRK07309 262 SHQYLVTA--------------------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDG 319 (391)
T ss_pred HHhhcccC--------------------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCe
Confidence 11121110 0122233333333 22223344455666778888888887 67765 3443
Q ss_pred eE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 418 AL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 418 ~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+. +++++++.. .....++.+++. +.|..+..+..+. +..++|++++ .+.++++..+++|+++.+++
T Consensus 320 g~~~~~~l~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 320 AFYIFAKIPAGY-------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA---ASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred eEEEEEECCCCC-------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHhh
Confidence 43 333443210 001345565544 4565444443332 3568999996 25789999999999888765
No 125
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=3.3e-19 Score=179.32 Aligned_cols=318 Identities=16% Similarity=0.116 Sum_probs=204.0
Q ss_pred HHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 108 EMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 108 ~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
+.+...+... .+.. ++...++|++ +++++|.+. ++.+++||.|+..++.+..-.
T Consensus 9 ~~v~~~l~s~--~~~~~g~~~~~fE~~----~a~~~g~~~---------~~~~~sgt~Al~~al~~l~~~---------- 63 (363)
T PF01041_consen 9 DAVLEVLRSG--WLSTYGPYVEEFEKE----FAEYFGVKY---------AVAVSSGTSALHLALRALGLG---------- 63 (363)
T ss_dssp HHHHHHHHHT--CCSSSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHTTGG----------
T ss_pred HHHHHHHHhC--CccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCChhHHHHHHHHhcCCC----------
Confidence 3444555433 3334 7889999999 888888665 499999999999998875321
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++.+|++|..++.+...++..+|+ .+++++++++ ++.||+++|+++|+++++ +|++++ ..|...|++
T Consensus 64 ~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~ 130 (363)
T PF01041_consen 64 PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMD 130 (363)
T ss_dssp TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HH
T ss_pred cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHH
Confidence 578899999999999999999999 9999999975 589999999999998765 676666 678889999
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl 344 (499)
+|.++|+++|++++.|+|++.+... +....|- ..|..++| +.|.+.+ .+.|++++++++...+.......-.
T Consensus 131 ~i~~~~~~~~i~lIeD~a~a~g~~~----~g~~~G~-~gd~~~fSf~~~K~i~~-geGG~v~~~~~~~~~~~~~~~~~g~ 204 (363)
T PF01041_consen 131 AIRAIARKHGIPLIEDAAQAFGARY----KGRPVGS-FGDIAIFSFHPTKIITT-GEGGAVVTNDPELAERARALRNHGR 204 (363)
T ss_dssp HHHHHHHHTT-EEEEE-TTTTT-EE----TTEETTS-SSSEEEEESSTTSSS-S-SS-EEEEESTHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHcCCcEEEccccccCcee----CCEeccC-CCCceEecCCCCCCCcC-CCCeeEEecHHHHHHHhhhhhccCc
Confidence 9999999999999999999876533 2222221 23555554 5688843 4678898988765433321111000
Q ss_pred CCCCCCCCCcccCCCcc----cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC----
Q 010842 345 KNKPSESNSVVDFKDWQ----VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---- 416 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~----~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---- 416 (499)
... ....+. +...-|+..+.+.+.+.. .+.+++++++..++++++.+.|.+.+++..+..+.
T Consensus 205 ~~~--------~~~~~~~~~~~g~n~rm~~~~AAigl~Q--L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~ 274 (363)
T PF01041_consen 205 SRD--------AFRRYRHELPPGYNFRMSELQAAIGLAQ--LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAER 274 (363)
T ss_dssp ETS--------ECSTTEESSSS--B-B-BHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEE
T ss_pred Ccc--------ccccccccccCCcccccHHHHHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 000 000011 112223334444444444 48899999999999999999999999987765322
Q ss_pred --ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eE------CC----------------EEEEEEecc
Q 010842 417 --FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IV------GG----------------LYMLRFAVG 470 (499)
Q Consensus 417 --~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~g----------------~~~lRi~~~ 470 (499)
...+.+++.+.. . ...+.+.+.|.++|+-..... .+ .. +..+.+-+
T Consensus 275 ~~~~~f~i~~~~~~------~-~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~- 346 (363)
T PF01041_consen 275 SSYYRFPIRLPDEA------L-ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI- 346 (363)
T ss_dssp BCESSEEEEETCCG------C-STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH-
T ss_pred cccccccccccccc------c-chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC-
Confidence 223455555421 0 115678888888886432211 11 00 12355544
Q ss_pred CCCCcHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIM 487 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~ 487 (499)
++..+++|+++++++|+
T Consensus 347 ~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 347 HPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp STTSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhhccC
Confidence 78899999999999885
No 126
>PRK08960 hypothetical protein; Provisional
Probab=99.85 E-value=1.6e-18 Score=176.24 Aligned_cols=327 Identities=14% Similarity=0.069 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
|..+.+.+...+......|...++..++++.+.+|+.+.+|.+.+. ...++|+|+++|+..++.+..+
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~------- 114 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP-----ERILVTPGGSGALLLASSLLVD------- 114 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccCcHHHHHHHHHHhcC-------
Confidence 4445555565554333457667778899999999998887763221 2468999999998877765422
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++.++|..+...+...|. +++.+|++.+++|.+|+++|++.+++++ .+++.+.++||||.+
T Consensus 115 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 115 ----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTL 181 (387)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcC
Confidence 567899999999999999999999 9999999876668999999999886543 267788899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
-+ +++|+++|++||+|+++|++|..+... +...... .+..--.+..+.+|.++.| .-+|+++..+. .+ +.+.
T Consensus 182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~~~ 257 (387)
T PRK08960 182 LSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASVL-EVDDDAFVLNSFSKYFGMTGWRLGWLVAPPA-AV-PELE 257 (387)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCChh-hccCCEEEEeecccccCCcccEEEEEEcCHH-HH-HHHH
Confidence 66 567777899999999999999765331 1111111 2221224567899998744 44888887543 22 2221
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
....+... ....+...++...+. .+.+++..+...+.++.+.+.|++. ++.+...|
T Consensus 258 ~~~~~~~~--------------------~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p 316 (387)
T PRK08960 258 KLAQNLYI--------------------SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEP 316 (387)
T ss_pred HHHhhhcc--------------------CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCC
Confidence 11000000 001222233333331 2445555666677788888889886 56543334
Q ss_pred CceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECC---EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 416 HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGG---LYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 416 ~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g---~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..+. +.+++.... .+ ..++.+++. ++|+.+..+..+.. ..++|++++. +.+.+...++.|.++.
T Consensus 317 ~g~~f~~~~~~~~~------~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 317 QGAFYLYADISAFG------GD--AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEAVERIARGL 385 (387)
T ss_pred CeeEEEEEeccccC------CC--HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHH
Confidence 4333 334443211 01 355666665 45755444433432 3589999972 5677777777776654
No 127
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.84 E-value=3.1e-19 Score=178.91 Aligned_cols=308 Identities=16% Similarity=0.076 Sum_probs=197.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s- 200 (499)
.++...++-+++++.+++++|.++.. ..+| ++|||.|+-.++..... ++ .++++...|.+
T Consensus 35 r~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~~ 96 (361)
T TIGR01366 35 RQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSSK 96 (361)
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHHH
Confidence 45667788888999999999996432 3466 46799887777654421 12 23333344543
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
+.+.+.....+. ++..++++..+ .++.+ +.++ +.+|++++.+|.+|.+.|+++| +|++|+.++
T Consensus 97 ~~~~a~~~~~~~-~~~~~~~~~~~--~~~~~-----~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i 159 (361)
T TIGR01366 97 FAKAVKLAPWLG-EPIIVTADPGS--APEPQ-----ADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVV 159 (361)
T ss_pred HHHHHHhhhccC-CceEEecCCCC--CCCCc-----cCCC------CCEEEEcccCCccceecccccc---cccCCCeEE
Confidence 555566543222 57777776432 34332 2222 3489999999999999999998 589999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC------ccCCCCCCCCCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD------PEYLKNKPSESNSV 354 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~ 354 (499)
||++.+.+....+- +.+|.+++++||+++.|.|.++++++++.. .+..... +.|+...
T Consensus 160 VDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~------- 223 (361)
T TIGR01366 160 IDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLP------- 223 (361)
T ss_pred EEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHH-------
Confidence 99998776554431 138999999999999887877777777532 2211110 1121110
Q ss_pred ccCCCcccCCCCCCC-----cHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-C--CceE-EEEEe
Q 010842 355 VDFKDWQVGTGRRFK-----SLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-R--HFAL-VCFRL 424 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~--~~~~-v~f~~ 424 (499)
.......+.+..+. .+.+-.+++.+-.+ |++.+.++..++++++++.+.+.+.++++.+ + .... .++.+
T Consensus 224 -~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~ 302 (361)
T TIGR01366 224 -TAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF 302 (361)
T ss_pred -HHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC
Confidence 00011111122221 12556677777666 6999999999999999999999977776642 2 1222 23444
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
. .+ .....+.+.|.++|+.+..+. .+. ...+|++++ .++|.+||++++++|+++.+++
T Consensus 303 ~-~g--------~~~~~v~~~L~~~gI~i~~~~~~l~-~~~vRis~~-~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 303 V-DD--------IDAATVAKILRANGIVDTEPYRKLG-RNQLRVAMF-PAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred C-Cc--------cCHHHHHHHHHHCCCeeccCccccC-CCcEEEEcC-CCCCHHHHHHHHHHHHHHHhhC
Confidence 2 21 114557777777786543321 222 357999997 7899999999999999987654
No 128
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.84 E-value=2.1e-18 Score=175.05 Aligned_cols=326 Identities=12% Similarity=0.071 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
+.++.+++....+ ....|....+...+++++.+|+.+..|++-.. .+.++|+|+++|+..++.+...
T Consensus 45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~~~~------- 111 (384)
T PRK06348 45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR-----NEIMATVGACHGMYLALQSILD------- 111 (384)
T ss_pred HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCChHHHHHHHHHHhcC-------
Confidence 4444444443322 23456666667889999999998887764321 2568999999998877776532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++.++|..+..+++.+|. .++.+|.+++++|.+|+++|++.+++.++ +|+++.++||||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NPtG~~ 178 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKTK------AIILNSPNNPTGAV 178 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCcc------EEEEeCCCCCCCcC
Confidence 566788999999999999999999 89999875444588999999998865332 56677899999999
Q ss_pred C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHh
Q 010842 263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~ 336 (499)
- .+++|.++|+++++++++|.+|+.+.... ..... +.+...-..+..+..|.++. ..-+|+++..+. +.+.
T Consensus 179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~--~~~~ 255 (384)
T PRK06348 179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY--IIET 255 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH--HHHH
Confidence 5 47888999999999999999998765421 11111 11112223566788999974 466888887532 2222
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+... ....+...++...+ ..+.+++..+...+.++++.+.|++++++++. +
T Consensus 256 ~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~ 314 (384)
T PRK06348 256 AKIINEGICF--------------------SAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-P 314 (384)
T ss_pred HHHHHHhccC--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-c
Confidence 2111111000 00123333333333 22345566666677788899999888777654 5
Q ss_pred CCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 415 RHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 415 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
|..+.+ +++++... ....++.+.+. +.|+.+..+..+. +..++|++++ .+.++++..++.|+++
T Consensus 315 p~gg~~~~~~~~~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 315 PKGSIYAFINIKKTG--------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCeeEEEEEecccCC--------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHHHHhh
Confidence 555544 34443211 01345666665 4576555444443 2478999985 4788899999888754
No 129
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=2.3e-18 Score=175.12 Aligned_cols=306 Identities=11% Similarity=0.030 Sum_probs=197.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST 200 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s 200 (499)
|....+...+..++.+++++++|.+.. +++++|+++++.++.+..+ ++.+|+++...|.+
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~---------i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~~ 129 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEAA---------LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHAS 129 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCcE---------EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccHH
Confidence 444455677888888999999997543 5666668888877766532 45678889999999
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
+..++...|. .+..++ .+|++++++.+.+... .+..+|+.....+++|.+.|+++|+++|++||+|++
T Consensus 130 ~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li 197 (385)
T TIGR01825 130 IIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTY 197 (385)
T ss_pred HHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEE
Confidence 9988888887 766553 5789999998875421 224467777778999999999999999999999999
Q ss_pred eeccccchhccCccc-hhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccC
Q 010842 281 VDAAYAGSACICPEF-RHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 281 vD~A~g~~~~~~~~~-~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~ 357 (499)
+|++|+.+.+..... .....++ ...|.+..+.+|+++.+ .|+++.+ ++.. +.+.. ...|....
T Consensus 198 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~--gG~~~~~-~~~~-~~~~~~~~~~~~~~---------- 263 (385)
T TIGR01825 198 VDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV--GGYAAGH-KELI-EYLKNRARPFLFST---------- 263 (385)
T ss_pred EECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC--CCEEecC-HHHH-HHHHHhCccccccC----------
Confidence 999997553321000 0000111 34788889999999754 2665543 3322 22221 11121110
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
.+.......+..++..+. ...+..++..++++++.+.|++. ++++. .+..+.+.+.+.+ ..
T Consensus 264 ------~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~ 324 (385)
T TIGR01825 264 ------AQPPAVVAALAAAVDELQ--RSPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGD---------EK 324 (385)
T ss_pred ------CCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECC---------HH
Confidence 000011122233333321 12345677778889999999886 77765 3444555555432 11
Q ss_pred HHHHHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
....+.+.|.++|+.. .+..+ .+..++|+++ +..++++||++++++|+++.+++
T Consensus 325 ~~~~~~~~L~~~gi~v-~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 325 AAQEFSRRLFDEGIFA-QSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred HHHHHHHHHHHCCcEE-cccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHHh
Confidence 2456788888887643 32211 2446799988 47799999999999999987653
No 130
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=8.3e-20 Score=166.68 Aligned_cols=302 Identities=16% Similarity=0.234 Sum_probs=203.4
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
..|...|-+..||++ +++++|-+. |+|+++||++|+.|++....+ ++..|++.+.+|
T Consensus 50 dVyGeD~tt~rLE~~----vA~l~GKEA---------gLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H 106 (384)
T KOG1368|consen 50 DVYGEDPTTNRLEQR----VAELFGKEA---------GLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH 106 (384)
T ss_pred ccccCCccHHHHHHH----HHHHhCccc---------eeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence 467778889999999 899999755 599999999999999988765 677899999999
Q ss_pred hhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCcc-EEEEEecCCCccc-ccCCh---hHHH
Q 010842 199 STFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVP-LFLCATVGTTSTT-AVDNV---EPLA 269 (499)
Q Consensus 199 ~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p-~~vv~t~gtt~~G-~id~l---~~I~ 269 (499)
.-..++. .+.|+ .++.|...+++ .||++++|++|.... .-...| -+|+.-.-.+.+| .+-|| ++|.
T Consensus 107 I~~~E~gg~s~l~gv---~~~tv~~e~dg--tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~ 181 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGV---HVRTVKNENDG--TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK 181 (384)
T ss_pred eeehhccChhhhccc---eeEeeeeCCCC--eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence 7655543 34455 77777766554 999999999998432 112233 3455544445556 66665 5667
Q ss_pred HHHHHhCCEEEeeccc--cchhc-cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842 270 EVANEYGIWVHVDAAY--AGSAC-ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN 346 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~--g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~ 346 (499)
++|+++|+.||+|||- -+... -+|- +.. .+.+||+++...|.+++|.|+ +++-+++-+.+ +.+++.
T Consensus 182 ~lak~~glkLH~DGARi~NAavasgV~v-k~i---~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~k-----A~~~RK 250 (384)
T KOG1368|consen 182 ALAKRHGLKLHMDGARIFNAAVASGVPV-KKI---CSAFDSVSICLSKGLGAPVGS--VIVGSKDFIDK-----ARHFRK 250 (384)
T ss_pred HHHhccCCeeecchhhhhhHHHHcCCCH-HHH---HHhhhhhhhhhhccCCCCccc--EEEccHHHHHH-----HHHHHH
Confidence 7899999999999983 22211 1111 111 234899999999999999554 44555433322 222222
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEec
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLN 425 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~ 425 (499)
.+.+|-|-...-..++|-.+. +.+ ..+++-.+.|+.+++.+.+.+++++-.+ .+.+++.+.+.
T Consensus 251 --------------alGGGmRQsGvLaaaaLval~-~~~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~ 314 (384)
T KOG1368|consen 251 --------------ALGGGMRQSGVLAAAALVALD-ENV-PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLC 314 (384)
T ss_pred --------------HhcCchhHHHHHHHHHHHHhh-cch-HHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecc
Confidence 122333332332333343332 222 2667777888888888888877887655 57777776553
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
-.. -..+.+++.+.+.|...+.... ..+|+++ |+..|.++++.+++.+.+
T Consensus 315 q~~--------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 315 QAR--------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred ccc--------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHH
Confidence 321 2256788888889977766533 3489999 799999999999999953
No 131
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=4.3e-18 Score=160.74 Aligned_cols=382 Identities=13% Similarity=0.092 Sum_probs=246.8
Q ss_pred CHHHHHHHHHhhhcCCC------CCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHH
Q 010842 68 SFETILKDVQEKIIPGI------THWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATM 141 (499)
Q Consensus 68 ~~~~i~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l 141 (499)
+...++..+...-.++. .....|.-++-+++.......+.+.+.+.. ...|..+.+...-.+++.+++-+-
T Consensus 43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~ 119 (447)
T KOG0259|consen 43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRD 119 (447)
T ss_pred cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcC
Confidence 34455555544433333 123456667766665555555555544432 246777777777777766654443
Q ss_pred cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC
Q 010842 142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~ 221 (499)
+..+-+ ..+.++|+|.++|+-+++.+.-+ ++..|++++++++-+..-+...|+ +|+..+.-
T Consensus 120 l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlL 180 (447)
T KOG0259|consen 120 LPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLL 180 (447)
T ss_pred CCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeeccc
Confidence 333211 12569999999999998877533 677899999999999889999999 99999988
Q ss_pred CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh
Q 010842 222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY 298 (499)
Q Consensus 222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~ 298 (499)
++.+|++|++.+|..++++|. +++++.++||+|.+ +.|++|+++|+++|+.++.|..|+-..+....+-+.
T Consensus 181 Pe~~weIDL~~veal~DENT~------AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpm 254 (447)
T KOG0259|consen 181 PEKDWEIDLDGVEALADENTV------AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPM 254 (447)
T ss_pred CcccceechHHHHHhhccCee------EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccch
Confidence 777899999999999999985 89999999999999 779999999999999999999998776544333222
Q ss_pred hcCCCCCceeEec-ccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH--HHH
Q 010842 299 LNGIERVDSFSFS-PHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL--RLW 374 (499)
Q Consensus 299 ~~g~~~aDsi~~~-~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al--~~~ 374 (499)
..--..+-++|.+ ..|-..+| .-.|++.+.|+.-. |... ..+. +..++.+.+.+ +...+ ++=
T Consensus 255 g~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv---f~~~-~~~q-------~~~~~~~~~~~---p~TiiQ~AlP 320 (447)
T KOG0259|consen 255 GKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV---FRDT-KVVQ-------GIKNFLDIIPG---PATIIQGALP 320 (447)
T ss_pred hhccccCceEeecccccccccCCceeeeEEEeccccc---ccch-HHHH-------HHHHHHhccCC---ccHhHHHHhH
Confidence 1111224455554 35555555 67899998886421 1000 0000 00001000000 00001 011
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCC-EE
Q 010842 375 MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGR-VY 453 (499)
Q Consensus 375 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~ 453 (499)
-.|..--++-+...+.-...+++...++|+++|++.....|...+..+.-.+.....+ + .....++.+|.++.. ++
T Consensus 321 ~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~--~-~dD~dFc~kL~~Eesv~~ 397 (447)
T KOG0259|consen 321 DILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPD--I-EDDVDFCQKLAREESVIC 397 (447)
T ss_pred HHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhcc--c-cccHHHHHHHhhhcceEE
Confidence 1222223567788888888999999999999999986666765554432111100000 0 012346666665554 45
Q ss_pred EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 454 LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 454 ~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
+.+..+.-++|+|++++ +..+.+++.+++|+++..+-.+++
T Consensus 398 LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~RH~~~~ 438 (447)
T KOG0259|consen 398 LPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDRHSKEQ 438 (447)
T ss_pred eccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHhhhhcc
Confidence 55666777899999997 678899999999999998876443
No 132
>PRK15029 arginine decarboxylase; Provisional
Probab=99.84 E-value=2.9e-18 Score=182.23 Aligned_cols=173 Identities=17% Similarity=0.182 Sum_probs=140.0
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN 214 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~ 214 (499)
.+..+++||.+.++ ++++|+|.+|..++.++.. ++..|++++++|.|+..++.+.|+ .
T Consensus 211 q~~aA~~fgA~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga---~ 268 (755)
T PRK15029 211 EKYAARVFGADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA---K 268 (755)
T ss_pred HHHHHHHhCCCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---e
Confidence 35699999999987 8899999999977776643 677899999999999999999999 9
Q ss_pred eEEeeCCCCCC---CccC-----HHHHHHHHHHHH--H--cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 215 IRALPTSVDAN---FSLS-----PQLLRRAVEADV--E--AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 215 v~~v~~~~~~~---~~~d-----~~~L~~~i~~~~--~--~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
+++++...+.. ..++ ++.++++|++.. + ++.+|.+|++|.+|. .|.+-++++|+++|++++++|+||
T Consensus 269 Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 269 PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEE
Confidence 99987543211 2344 999999997642 2 346788888888765 799999999999999999999999
Q ss_pred ccccchhccCccchh--hhc----CCCCCc-eeEecccccccCCCcceEEEEeCc
Q 010842 283 AAYAGSACICPEFRH--YLN----GIERVD-SFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~--~~~----g~~~aD-si~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
+|||+.+.+.|.++. .+. .-.++| .++.|.||.|.+-..++++.+++.
T Consensus 348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred CccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 999998877776653 121 113588 999999999998889999999765
No 133
>PRK07337 aminotransferase; Validated
Probab=99.84 E-value=1.5e-18 Score=176.56 Aligned_cols=328 Identities=14% Similarity=0.048 Sum_probs=209.7
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|....+...+++++.+|+.+.+|..-.. ...++|+|+++|+..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------- 112 (388)
T PRK07337 46 EPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP-----ERIVVTAGASAALLLACLALVE-------- 112 (388)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HhEEEecCcHHHHHHHHHHhcC--------
Confidence 344555555554334456666678899999999999888863221 1468999999998776665432
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++.++|......++..|. +++.+|++.+++|.+|+++|++.+.+.++ +|+.+.++|+||.+-
T Consensus 113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~ 180 (388)
T PRK07337 113 ---RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERTR------GVLLASPSNPTGTSI 180 (388)
T ss_pred ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccce------EEEEECCCCCCCcCc
Confidence 567899999999999999999999 99999998655689999999998865433 677889999999985
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCcee-EecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSF-SFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
+ +++|+++|+++++|+++|.+|..+... +...... .+ ..+.+ +.+.+|.++.| ..+|+++..+. +.+.+.
T Consensus 181 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~--l~~~l~ 255 (388)
T PRK07337 181 APDELRRIVEAVRARGGFTIVDEIYQGLSYD-AAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPEA--LVGTFE 255 (388)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCHH--HHHHHH
Confidence 4 788899999999999999999765331 1111111 11 13444 45889999755 44888887543 222221
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
....++.. ....+..+++...+. ...+++..++..+.++++.+.|++. ++.+...|
T Consensus 256 ~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p 314 (388)
T PRK07337 256 KLAQNLFI--------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMP 314 (388)
T ss_pred HHHHHhcc--------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC
Confidence 11111100 011233444444442 2345666667777888888999886 55543234
Q ss_pred C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 416 H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 416 ~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
. ...+++++.... ... .....++.+++. +.|..+..+..+. +..++|++++. ++++++..+++|.++
T Consensus 315 ~~g~f~~~~~~~~~--~~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 315 DGAFYVYADCRGVA--HPA--AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVARLGKL 386 (388)
T ss_pred CeeEEEEEeccccc--CCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHHHHHHH
Confidence 3 344555554210 000 001345665544 5565544444342 24689999962 578888888888764
No 134
>PRK07550 hypothetical protein; Provisional
Probab=99.84 E-value=4.2e-18 Score=173.15 Aligned_cols=330 Identities=11% Similarity=0.031 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...+ +.....|...++..++++++.+++.+..|..... ...++|+|+++|+..++.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------ 112 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-----EQVHITSGCNQAFWAAMVTLAG------ 112 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhcC------
Confidence 444555555443 2223345556678999999999999988864221 2468899989888776665532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.++|..+...++..|+ +++.|+.+++.++.+|+++|++.+++.++ +|+.+.++|+||.
T Consensus 113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~~------~v~~~~P~NPtG~ 178 (386)
T PRK07550 113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRTR------AIALVTPNNPTGV 178 (386)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccCc------EEEEeCCCCCCCc
Confidence 567799999999888888899999 99999998544578999999999976433 6677789999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+ +++|+++|++||+++++|++|+.+.............. ..-..+..+..|.++.| ..+|+++..+. .+.+
T Consensus 179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~-~~~~ 257 (386)
T PRK07550 179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA-RIAE 257 (386)
T ss_pred ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH-HHHH
Confidence 855 78999999999999999999986532111111111111 11124577899998744 56888877543 2211
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
+.. +.... +. ....+..+++...+. .+..++..++..+.++++.+.|.+.+++.+.
T Consensus 258 -~~~---~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 315 (386)
T PRK07550 258 -IEK---FMDTV-------------AI----CAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL- 315 (386)
T ss_pred -HHH---HHhhc-------------cc----CCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence 111 11000 00 011233333333332 2344555666777888899999887676543
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
++....+++++.... ....++.++|. +.|+.+..+..+. +..++|++++. .++++++++++.|.++.
T Consensus 316 ~~g~~~~~~~~~~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~l~~~~ 385 (386)
T PRK07550 316 ASGAYFAYVRHPFPD--------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVERLRAFA 385 (386)
T ss_pred CCceEEEEecCCCCC--------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHHHHhhC
Confidence 334344444543211 01456777765 4575544433332 24689999963 46899999999998763
No 135
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.84 E-value=2.3e-18 Score=176.32 Aligned_cols=296 Identities=12% Similarity=0.077 Sum_probs=192.0
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++.+.+++++|.+.. +++++|++||..++..++.. .++.+|+.....|.++...+...|.
T Consensus 94 ~~l~~~la~~~g~~~~---------~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~~~- 154 (407)
T PRK09064 94 VELERELADLHGKEAA---------LVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRSRC- 154 (407)
T ss_pred HHHHHHHHHHhCCCcE---------EEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHcCC-
Confidence 3344448888886443 77788899999888776432 0355677777789999888888887
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~ 291 (499)
.+..++. .|+++|++.++... ...+.+|++..+.+++|.+.|+++|.++|++||++++||+||+.+.+
T Consensus 155 --~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~- 222 (407)
T PRK09064 155 --EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY- 222 (407)
T ss_pred --cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-
Confidence 6665553 37899998886421 12355788888999999999999999999999999999999973322
Q ss_pred Cccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 292 CPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 292 ~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.+..... ..++ ...|.++.+.+|.++.+ | |+++.++ +.. +.+. ...+|.... ...+
T Consensus 223 g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~~~-~~~-~~l~~~~~~~~~t~----------------~~~~ 282 (407)
T PRK09064 223 GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAGSA-ALV-DAVRSYAPGFIFTT----------------SLPP 282 (407)
T ss_pred CCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEecCH-HHH-HHHHHhCccccccC----------------cCCH
Confidence 1211111 1222 34688888999998754 2 6665543 322 2221 111221110 0111
Q ss_pred CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
..+..+..++..+... ....++..++++++.+.|++. +++++. +..+++.+.+.. .....++.++|.
T Consensus 283 ~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~---------~~~~~~l~~~L~ 349 (407)
T PRK09064 283 AIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGD---------PEKCKKASDMLL 349 (407)
T ss_pred HHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC---------HHHHHHHHHHHH
Confidence 1123334444444222 334577888999999999886 777653 445666665532 123466777776
Q ss_pred hc-CCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 448 ST-GRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 448 ~~-g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++ |+. +.+.. ..+..++|+++. ..+|++|+++++++|+++.+++
T Consensus 350 ~~~gi~-v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 350 EEHGIY-VQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HhCCEE-EeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 54 644 43321 134567999984 8899999999999999988765
No 136
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=3e-18 Score=174.06 Aligned_cols=326 Identities=14% Similarity=0.086 Sum_probs=206.6
Q ss_pred HHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+. .....|....+..++.+++.+|+.+.+|.+... ....++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------- 113 (383)
T TIGR03540 45 KHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------- 113 (383)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC-------
Confidence 344444444432 223456555567889999999999888874221 01246788888888776665422
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++.+++..+..+++.+|. +++.+|++.++++.+|+++|++.+.+++ .+|+++.++||||.+
T Consensus 114 ----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~i~~P~NPtG~~ 180 (383)
T TIGR03540 114 ----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKKA------KLMFINYPNNPTGAV 180 (383)
T ss_pred ----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhccccc------eEEEEeCCCCCcCcc
Confidence 567899999999999999999999 9999999865457899999999886543 377788899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
-+ +++|+++|++||+++++|.+|+............ +.+.........+..|.++.| .-+|+++.. ++.. +.
T Consensus 181 ~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~-~~ 258 (383)
T TIGR03540 181 APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLI-AG 258 (383)
T ss_pred CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHH-HH
Confidence 76 7899999999999999999997654321111111 111112235567788998755 447887653 3332 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+... ....+...++...+ +.+.+++..++..++++.+.+.|++. ++.+..+
T Consensus 259 ~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~ 317 (383)
T TIGR03540 259 LGKVKTNVDS--------------------GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKP 317 (383)
T ss_pred HHHHHHhccc--------------------CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCC
Confidence 2111111000 00112222222222 34556677777788889999999987 7876644
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.....+++++.+.- ...++.+++. +.|+.+..+..+. +..++|++++ .+++++++.++.|.+
T Consensus 318 ~~~~~~~~~l~~~~---------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEGY---------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT---VPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCCC---------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec---CCHHHHHHHHHHHhh
Confidence 33333455554210 1355677765 4565444443332 2468999996 356778777777654
No 137
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.84 E-value=4e-18 Score=173.69 Aligned_cols=310 Identities=13% Similarity=0.058 Sum_probs=197.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
..|....+...+++++.+|+.+.+|.+-+. ....++|+|+++|+..++.+..+ ++..|+++.++|
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y 131 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY 131 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence 456555667899999999999888864221 00247789999988877665432 567899999999
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY 275 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~ 275 (499)
..+...+...|+ +++.||++.+++|.+|+++|++.+.+++ .+|+.+.++||||.+-+ +++|+++|+++
T Consensus 132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 999888899999 9999999865568899999999886543 37777889999999976 88999999999
Q ss_pred CCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
|+|+++|++|+.+.......... +.+.......+.+..|.++.| ..+|+++... ... +.+.....+...
T Consensus 203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~-~l~-~~l~~~~~~~~~------ 274 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR-HII-QGLRTLKTNLDY------ 274 (394)
T ss_pred CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH-HHH-HHHHHHHhhccc------
Confidence 99999999997654311111111 111122334456778988644 5589887643 322 332211111000
Q ss_pred CcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-EEEEEecCCCC
Q 010842 353 SVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-LVCFRLNPYPH 429 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~ 429 (499)
+ ...+...++...+ ..+.+++..++..++.+++.+.|++. ++++. +|..+ .+++++.+.-
T Consensus 275 ------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~~~- 337 (394)
T PRK05942 275 ------------G--IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPVGM- 337 (394)
T ss_pred ------------C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCCCC-
Confidence 0 0112222222222 24556677777778888899999876 67655 45545 3445553211
Q ss_pred CCcchhHHHHHHHHHHH-HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWV-NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
+ ..++..++ .++|+.+..+..+. +..++|+++. .+.+.+.+.++.|.+
T Consensus 338 ------~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 338 ------G--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---ADCDRLGEALDRLKQ 388 (394)
T ss_pred ------C--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHH
Confidence 0 23344444 45676544444442 3578999995 344555555555544
No 138
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=2.9e-18 Score=178.21 Aligned_cols=322 Identities=12% Similarity=0.073 Sum_probs=208.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcC----CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 121 WLASPASTELEIVVMDWLATMLK----LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
|....+..++.+++.+|+.+.+| ++++ ..++|+|+++|+.+.+.+..+ ++..|+++.+
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence 44445668899999999999887 3343 468999999998877776543 6778999999
Q ss_pred CchhHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842 197 THSTFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA 272 (499)
Q Consensus 197 ~H~s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia 272 (499)
.+..+...+. ..|+ +++.||++.+++|.+|+++|+++++...+.+.++.+|+++.++||||.+-+ +++|+++|
T Consensus 152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a 228 (496)
T PLN02376 152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV 228 (496)
T ss_pred CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence 9999998877 4899 999999975556899999999887654444455667888899999999955 67788899
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCC-------CCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIE-------RVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-------~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
++|++++++|.+|+...+..+.+.....-++ ..+ .++.+..|.++.| .-+|+++..++... ........
T Consensus 229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~~~~ 307 (496)
T PLN02376 229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARKMSS 307 (496)
T ss_pred HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHHHhh
Confidence 9999999999999876543222222111111 012 2467999999755 77999988655432 22211111
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HH----HHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QS----HIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~----~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
+. . ...+..+++...+....+ ++ ..++..+..+.+.+.|++. +++.+. +..
T Consensus 308 ~~-~---------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~-~~a 363 (496)
T PLN02376 308 FG-L---------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLT-SNA 363 (496)
T ss_pred cC-C---------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCc
Confidence 10 0 012334444444432222 33 3444556667777888775 676553 444
Q ss_pred eE-EEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 418 AL-VCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 418 ~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+. +++.+.+.. .....-+...++.+.+.++ |..+..+..+. +.+++|+++++ .+++.++..++.|+++..+
T Consensus 364 G~flwi~l~~~~--~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 364 GLFAWMDLRHLL--RDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred eEEEEEEchhhh--ccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHHHH
Confidence 34 444443210 0000011124566666665 65444444442 35789999963 4578899999999888754
No 139
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=178.41 Aligned_cols=322 Identities=11% Similarity=0.024 Sum_probs=199.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCCch
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQTHS 199 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~H~ 199 (499)
......++|..+.+..+++|+...+.+. -.+-..+|+.||+.++.+... ++..|++ +...|.
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~----~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGhl 138 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWG----VNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGHL 138 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeE----EecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcch
Confidence 3346788899888889999998765310 001247899999988877643 5667776 333444
Q ss_pred h---HHHHHHHhCCCCCCeE--EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842 200 T---FAKVCKLAGVSPANIR--ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE 274 (499)
Q Consensus 200 s---~~ka~~~~G~g~~~v~--~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~ 274 (499)
+ ....+++.+.+. .+. ..+++.+ ++.+|+++|++++.+. +|.+|+++ .+.+|..-|+++|+++|++
T Consensus 139 ~H~~~~~g~~~s~~~~-~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~ 209 (475)
T PLN03226 139 SHGYQTDGKKISATSI-YFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG--ASAYPRDWDYARMRKIADK 209 (475)
T ss_pred hhhhhhcccccccceE-EEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHH
Confidence 4 333333333310 111 2334433 3689999999998643 24445443 3458888999999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-c---cC--CCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-P---EY--LKNKP 348 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~---~y--l~~~~ 348 (499)
+|++++||+||+.+.+..+..... ++.+|++++++||||.+|.| |++++++.. . ..+... . .| ..+..
T Consensus 210 ~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~-~-~~~~~g~~~~~d~~~~i~~a 283 (475)
T PLN03226 210 VGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGP-K-PPKGQGEGAVYDYEDKINFA 283 (475)
T ss_pred cCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhh-c-ccccCCCccHHHHHHHhccc
Confidence 999999999998876654322211 23699999999999988987 777776532 1 000000 0 01 00000
Q ss_pred CCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecC
Q 010842 349 SESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNP 426 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~ 426 (499)
.....+++-.. ....+.++++.+-..+++++.++..+++++|++.|.+ .|++++.+ ...+++.+.+.+
T Consensus 284 ---------~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~~~ 353 (475)
T PLN03226 284 ---------VFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDLRP 353 (475)
T ss_pred ---------cCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEccC
Confidence 00112222111 2345566677766667888899999999999999998 59999863 334666666644
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E----CCEEEEEEec---cCCCCcHHHHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V----GGLYMLRFAV---GASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~----~g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.. + ...++.+.|.+.|+..-.... . -....+|+.. ++...+++|++++.+.|.++.+.
T Consensus 354 ~g------i--~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 354 LG------L--TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CC------C--CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 32 0 123455556666754322110 0 0123488732 35677899999999999888774
No 140
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.84 E-value=4.8e-18 Score=170.68 Aligned_cols=289 Identities=12% Similarity=0.042 Sum_probs=189.5
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++++.+++.+|.+++ ..++|+|+++++..++.+. . ++. +++..+++..+...++..|.
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~-viv~~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRR-AMIVTPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCC-EEEeCCCcHHHHHHHHHcCC-
Confidence 3455557788888665 4688999888877666543 1 232 34445677788888999999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccch
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
+++.+|.++++++.+| +++++.+.+. +.+|+++.++||||.+-+ +++|+++|+++++++++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999998765456777 3444555332 236778999999999987 888999999999999999999765
Q ss_pred hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
..........+... ....++.+.+|+++.| .-+|+++..++..+. .+...... + .
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~-~l~~~~~~----------------~------~ 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA-RMRRQQMP----------------W------S 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHH-HHHHhCCC----------------C------c
Confidence 42111111122222 2457789999999954 668998876544332 22111000 0 0
Q ss_pred CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
...+...++...+ +.+..++..++..+.++++.+.|++++++.+. ++..+.+.+++... ..++.+.|
T Consensus 244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l 311 (356)
T PRK08056 244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP-----------DIDLQRAL 311 (356)
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC-----------hHHHHHHH
Confidence 0123334444444 33445566677788889999999988888765 55555555555321 24577778
Q ss_pred HhcCCEEEEeeeECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVGG--LYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++|+.+..+..+.+ ..++|+++. +.++.+.++++|+++.
T Consensus 312 ~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 312 LTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVL 353 (356)
T ss_pred HHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence 788865554444433 358999985 6788999999998763
No 141
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=5.1e-18 Score=172.64 Aligned_cols=322 Identities=12% Similarity=0.034 Sum_probs=205.9
Q ss_pred HHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 106 LGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
+.+.+...++.. ...|...++...+.+++.+|+.+.+|.+-+. . ..++|+|+++++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~-------- 116 (389)
T PRK08068 50 IVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN-------- 116 (389)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC--------
Confidence 455555555432 2346556778899999999998877864221 1 357899998887776554322
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++.++|..+..+++..|+ +++.+|+++++++.+|+++|++.+.+.+ .+|+.+.|+||||.+-
T Consensus 117 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 117 ---PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAVA 184 (389)
T ss_pred ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCcC
Confidence 567789999999999999999999 9999999865458899999999886433 3777788999999996
Q ss_pred Ch---hHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 264 NV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 264 ~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
+. ++|+++|++|++++++|.+|+.+............ +...-..++.+..|.++.| .-+|+++. +++.+ +.+
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~-~~l 262 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVI-EAI 262 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHH-HHH
Confidence 65 67888999999999999999765332111111111 1111235667889999655 55788875 33322 322
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.....++.. + ..+....++...+ +.+.+++..++..+.++++.+.|++. ++.+. +|
T Consensus 263 ~~~~~~~~~------------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~ 320 (389)
T PRK08068 263 NLLQDHLFV------------------S--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-AP 320 (389)
T ss_pred HHHHhhccC------------------C--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CC
Confidence 211111100 0 0011122222222 34566777888888889999999887 67654 45
Q ss_pred CceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 416 HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 416 ~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
..+. +++.+.+.. ...++.+.+.+ .|+.+..+..+. +..++|++++ .+++.+...++.|.+
T Consensus 321 ~g~~~~~v~~~~~~---------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~ 385 (389)
T PRK08068 321 KGSFFAWMPVPKGY---------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL---TDEERLREAVERIGK 385 (389)
T ss_pred CeeEEEEEECCCCC---------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc---CCHHHHHHHHHHHHH
Confidence 5444 455554311 13567777775 475544433332 3468999996 345667766666654
No 142
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.83 E-value=1.2e-17 Score=169.30 Aligned_cols=310 Identities=11% Similarity=0.060 Sum_probs=194.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.+...++|++ +++++|.+++ +++++|+.|+..++.+..+ ++..|++++..|.++..
T Consensus 42 ~~~~~~LE~~----lA~~~g~e~a---------l~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~ 97 (392)
T PLN03227 42 IDAHLELEQC----MAEFLGTESA---------ILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLV 97 (392)
T ss_pred hHHHHHHHHH----HHHHhCCCcE---------EEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHH
Confidence 3455566666 8999998754 7888888888866665422 67789999999999999
Q ss_pred HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--------CCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--------GLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--------g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
++.+.+. +++.++.+ |++++++.++..... ..++.+|++....+++|.+.|+++|.++|++|
T Consensus 98 ~~~l~~~---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~ 167 (392)
T PLN03227 98 GVSLSRA---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEF 167 (392)
T ss_pred HHHHcCC---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHc
Confidence 8888887 77777643 455666554432211 12345777787888999999999999999999
Q ss_pred CCEEEeeccccchhccCcc--chhhhcC---CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPE--FRHYLNG---IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPS 349 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~--~~~~~~g---~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~ 349 (499)
|+++++|++|+.+. ..+. ......| ..++|.++.+.+|.++ |. .|++..+. +.. +.+.. ...+.++
T Consensus 168 g~~livDe~~~~g~-~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~~~-~~~-~~~~~~~~~~~~~--- 239 (392)
T PLN03227 168 HYRLILDESFSFGT-LGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVGSE-EVV-DHQRLSGSGYCFS--- 239 (392)
T ss_pred CCEEEEECcccccc-cCCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEecCH-HHH-HHHHHhCcCcccc---
Confidence 99999999997332 2111 1111112 2357999999999876 32 34444443 222 22211 1111111
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE----------EcCCCce
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI----------VVPRHFA 418 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~----------~~~~~~~ 418 (499)
-...+..+|+++..+ .....++++++..+++++|++.|++. ++.. ...+..+
T Consensus 240 ----------------~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~ 302 (392)
T PLN03227 240 ----------------ASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISP 302 (392)
T ss_pred ----------------CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCC
Confidence 111133445554333 21223567888899999999999752 2221 1233456
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-------eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-------IVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
++.+.+.+..............++.+++.++|....... ..-....+|+++ +..+|++||++++++|+++.+
T Consensus 303 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~-~~~~t~eei~~~~~~l~~~~~ 381 (392)
T PLN03227 303 IIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVA-NASHTREDIDKLLTVLGEAVE 381 (392)
T ss_pred EEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHHHHH
Confidence 777777442100000001123578888889997543211 112246799999 589999999999999999987
Q ss_pred HH
Q 010842 492 RL 493 (499)
Q Consensus 492 ~l 493 (499)
++
T Consensus 382 ~~ 383 (392)
T PLN03227 382 AI 383 (392)
T ss_pred HH
Confidence 75
No 143
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=5.9e-19 Score=175.64 Aligned_cols=308 Identities=11% Similarity=0.023 Sum_probs=196.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
++...++-+++++.+++++|.+.+. ..+++ +|||+|+-.++...... |.+..++..+...|. +.
T Consensus 32 ~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r-~~ 96 (349)
T TIGR01364 32 SKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKK-AA 96 (349)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHH-HH
Confidence 3455588888999999999985432 24555 55998877666544211 112334444433343 46
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCC--CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 203 KVCKLAGVSPANIRALPTSVDAN--FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
+.++.+|+ +..+..++.+. -.+|+++++. ++ .+.+|.+++..|+||...| ++++.+++.++
T Consensus 97 ~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~i 159 (349)
T TIGR01364 97 KEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLV 159 (349)
T ss_pred HHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEE
Confidence 67777777 33333321110 1456665552 11 2458999999999999876 66777899999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
||++.+.+....+- ...|.+++++||+++ |.|.|+++++++.. .+.-...+.|.... ......
T Consensus 160 VDavss~g~~~id~--------~~~d~~~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~~~~-------~~~~~~ 222 (349)
T TIGR01364 160 ADMSSNILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSMLNYK-------IHAEND 222 (349)
T ss_pred EEccccccCccCCH--------HHccEEEEecccccC-CCceEEEEECHHHH-hhcccCCCCcchHH-------HHHhcC
Confidence 99998776554321 125799999999986 88999999988643 12111111221100 000000
Q ss_pred ccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC--Cc-eEEEEEecCCCCCCcch
Q 010842 361 QVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR--HF-ALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 361 ~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~~~~~~ 434 (499)
...++... ....+..+++.+-.+ |++++.++..++++++++.|++++|+.... ++ .. .+++|.+.+.
T Consensus 223 ~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------- 295 (349)
T TIGR01364 223 SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------- 295 (349)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-------
Confidence 01111111 234667778888777 799999999999999999999998876553 22 23 4577776542
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+..++.+.+.++|. ++..... ....+|+|++ +++|++|||+++++|+++.++
T Consensus 296 --~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 --ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred --hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHHh
Confidence 123566677888897 4433221 1247999995 889999999999999987653
No 144
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=1.1e-17 Score=167.81 Aligned_cols=288 Identities=14% Similarity=0.073 Sum_probs=193.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
....++++ ++++++.+.+ ..++|+|+++++..++.+..+ ++..|+++.+++..+...+
T Consensus 60 ~~~~lr~~----ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~ 117 (351)
T PRK14807 60 TAEKLREE----LARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYS 117 (351)
T ss_pred cHHHHHHH----HHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHH
Confidence 34455555 6666787654 358888888887776665422 5667888888888888888
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+..|+ +++.++.++ +|.+|++++++++.+. ++.+|+++.++|+||.+-+.+++.++|++++.++++|++|
T Consensus 118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y 187 (351)
T PRK14807 118 KIAGA---VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAY 187 (351)
T ss_pred HHcCC---eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcc
Confidence 99999 999999874 3689999999988641 1236777899999999999999999999989999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
+.+. ...........+ -..+..+..|.++.| ..+|+++.. ++ +.+.+...... +
T Consensus 188 ~~~~--~~~~~~~~~~~~-~vi~~~S~SK~~~~~GlRiG~~v~~-~~-~~~~~~~~~~~----------------~---- 242 (351)
T PRK14807 188 FEFY--GNTIVDVINEFE-NLIVLRTLSKAFGLAGLRVGYAVAN-EN-ILKYLNLVKSP----------------Y---- 242 (351)
T ss_pred hhhc--ccchHHHhhhCC-CEEEEecchHhcccchhceeeeecC-HH-HHHHHHHccCC----------------C----
Confidence 7642 111111221111 235667889999744 667887753 33 22333221000 0
Q ss_pred CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
....+...++...+....+++.+++..+.++++.+.|++.+++++. ++..+.+.+++.. ...+.+
T Consensus 243 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~------------~~~~~~ 307 (351)
T PRK14807 243 --NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD------------ADYVYQ 307 (351)
T ss_pred --CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC------------HHHHHH
Confidence 0123444444455444456777777778888899999888888764 5555555555532 356777
Q ss_pred HHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 445 ~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+.++|+.+..... .....++|++++ +.++.++++++|+++
T Consensus 308 ~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 308 GLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred HHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 77788865433221 123468999996 567889999998775
No 145
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.83 E-value=4.1e-18 Score=171.55 Aligned_cols=292 Identities=15% Similarity=0.101 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
.+..++.+.+++++|.+.. +++++|+++++.++.+... ++.+|+++...|.+...+++..
T Consensus 61 ~~~~~l~~~la~~~~~~~~---------i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 120 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEAA---------LLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLS 120 (360)
T ss_pred HHHHHHHHHHHHHhCCCCE---------EEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhc
Confidence 3344455557787776543 6667778888766554421 4667888999999999999999
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
|+ +++.++. +|+++|++.+++.. +..+.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+
T Consensus 121 g~---~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~ 188 (360)
T TIGR00858 121 GA---RVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTG 188 (360)
T ss_pred CC---ceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccccc
Confidence 99 8887762 58899999886532 112346777777889999999999999999999999999999754
Q ss_pred hccCc-cchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842 289 ACICP-EFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 289 ~~~~~-~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
.+... .......++ ...|.+..+.+|+++.+ | |+++.+. +.. +.+.. ...+.. ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~~-~~~-~~~~~~~~~~~~-----------------~~ 247 (360)
T TIGR00858 189 VLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGSQ-ALI-DYLINRARTLIF-----------------ST 247 (360)
T ss_pred CcCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcCH-HHH-HHHHHhCcccee-----------------cC
Confidence 32111 000011122 24688889999999864 3 6665543 322 22211 111110 01
Q ss_pred CCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842 365 GRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL 443 (499)
Q Consensus 365 sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~ 443 (499)
+.. .....+..+++.+ ...++..++..++++++.+.|++. ++++. ++..+++.+.+.. .....++.
T Consensus 248 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~~~~ 314 (360)
T TIGR00858 248 ALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD---------NASALALA 314 (360)
T ss_pred CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence 111 1112223334332 223567788889999999999987 57655 4555667666642 12245688
Q ss_pred HHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 444 DWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 444 ~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
++|.++|+.+..... ..+..++|+++. ..++++|+++++++|+
T Consensus 315 ~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 315 EELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 888888865433211 134468999995 7789999999998763
No 146
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=6e-18 Score=175.20 Aligned_cols=327 Identities=10% Similarity=0.044 Sum_probs=212.2
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST 200 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s 200 (499)
|....+...+.+++.+|+.+.+|.+.... ....++|+|+++++...+.+..+ ++..|+++.+.+..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~---~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTFD---PNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCcC---hHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 44444667899999999988877431000 01468899999987777665533 67789999999999
Q ss_pred HHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhC
Q 010842 201 FAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYG 276 (499)
Q Consensus 201 ~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~ 276 (499)
+...+. ..|+ +++.||++.+++|.+|+++|++++++..+.+.++.+|+++.++||||.+-+ +++|.++|++|+
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 888877 5899 999999875456899999999999876555666777888899999999954 677888899999
Q ss_pred CEEEeeccccchhccCccchhhhc--------CC--CCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLN--------GI--ERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~--------g~--~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
+|+++|.+|+.+.+..+.+...+. +. ..--.+..+..|.++ ...-+|+++..++... +.+.....+.
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~- 302 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFG- 302 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcC-
Confidence 999999999875442222211111 00 011245678899987 4477899888654322 2222111110
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-E
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-L 419 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~ 419 (499)
. ...+...++...+.. ..+++..++..+..+.+.+.|++. ++.+. +|..+ .
T Consensus 303 ~---------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~f 359 (468)
T PLN02450 303 L---------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLF 359 (468)
T ss_pred C---------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEE
Confidence 0 012333333333322 235666777778888888999887 77654 45555 4
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
+++++...- ..... ....++.+++.+ .|+.+..+..+. +.+++|+++++ .+++++++.++.|+++.++..
T Consensus 360 lwi~l~~~~--~~~~~-~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 360 CWVDMRHLL--KSNTF-EAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred EEEEchHhc--CcCCc-hHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHHhcc
Confidence 444543210 00001 112345666654 575544444443 34689999963 467899999999999887654
No 147
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=4.7e-18 Score=173.72 Aligned_cols=320 Identities=11% Similarity=0.009 Sum_probs=200.1
Q ss_pred cccccChhhHHHHHHHHHHHHHHc--CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 119 FNWLASPASTELEIVVMDWLATML--KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~--g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
..|....+...+.+++.+|+.+.. +.+.+ ..++|+|+++++..++.+..+ ++..|+++..
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 456555566788888777775432 33333 468899988888777665422 4667888999
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVAN 273 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~ 273 (499)
+|..+..+++..|. +++.++++.+++|.+|+++|++.+.+++ .+|+.+.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999998 8998988755558899999999886543 37888899999999977 899999999
Q ss_pred HhCCEEEeeccccchhccCccchhhhcCCCCCceeE-ecccccccCC-CcceEEEEe-Cchh---HHHhhcCCccCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFS-FSPHKWLLSY-LDCCCLWVK-QPGL---LVKALSTDPEYLKNK 347 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~~p-~~~g~l~~r-~~~~---l~~~~~~~~~yl~~~ 347 (499)
++|+++++|.+|+.+............-......++ .+..|.++.| .-+|+++.. ++.. +.+.+... .+...
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~- 276 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRL- 276 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hcccc-
Confidence 999999999999865432111111111112223444 4568998655 557888864 3321 11111100 00000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHH---HHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHI---RSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR 423 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~---~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~ 423 (499)
....+...++...++. +.+.+.+ ++..+.++.+.+.|++.+++++..+.....++++
T Consensus 277 -------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~ 337 (404)
T PRK09265 277 -------------------CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPK 337 (404)
T ss_pred -------------------CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEE
Confidence 0112333444444431 2223322 3555667788888888888776533333344445
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+... . .....+.+.+.+.+.|..+..+..+. +..++|+++. .+++++++.+++|.++.+..
T Consensus 338 ~~~~~~-~---~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 338 LDPKVY-P---IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred eccccc-C---CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHHh
Confidence 543100 0 00112345566667786555444442 3468999995 57899999999999877643
No 148
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.9e-18 Score=173.71 Aligned_cols=291 Identities=14% Similarity=0.136 Sum_probs=194.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|....+|+. ++++.|.+. .++++||++|+..++.+... ++..|+++...|.+.
T Consensus 50 ~~npt~~~Le~~----lA~leg~e~---------ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~ 105 (388)
T PRK08861 50 SGNPNRGLLEQT----LSELESGKG---------AVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGT 105 (388)
T ss_pred CCCchHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHH
Confidence 345777888888 888888533 59999999998888766532 566788888888765
Q ss_pred HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
...+ ...|+ +++.++ ..|++++++++.++++ +|++..++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~lesP~NPtG~v~dl~~I~~la~~~gi 169 (388)
T PRK08861 106 YRLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKPK------LILLETPSNPLVRVVDIAELCQKAKAVGA 169 (388)
T ss_pred HHHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 4433 22345 666664 2488999988876543 88899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||.+|+.+....| .-. ++|.++.+.|||+++|.+ .|++..++++...+ +.....+
T Consensus 170 ~vIvDea~~~~~~~~p----l~~---GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~-~~~~~~~------------ 229 (388)
T PRK08861 170 LVAVDNTFLTPVLQKP----LEL---GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEE-LAWWGNC------------ 229 (388)
T ss_pred EEEEECCccccccCCC----ccc---CCCEEEeecceeccCCCcceeEEEEecHHHHHHH-HHHHHhc------------
Confidence 9999999986543222 111 499999999999998866 67776666543221 1110011
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------Cce
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFA 418 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~ 418 (499)
.|........|..++ |.+.+.-++++..++|..+.+.|+++|.++-+ .| | ..+
T Consensus 230 --------~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg 299 (388)
T PRK08861 230 --------IGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGS 299 (388)
T ss_pred --------cCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCc
Confidence 122223556676655 45888999999999999999999999988643 22 1 234
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEee-----eE-------CC--EEEEEEeccCCCCc
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHT-----IV-------GG--LYMLRFAVGASLTD 475 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~g--~~~lRi~~~~~~~t 475 (499)
+++|.+... .+...++++.|.-- |. .+..+. .. .| ...+|+|++
T Consensus 300 ~~sf~~~~~--------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----- 366 (388)
T PRK08861 300 MLSFEFAGS--------FEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG----- 366 (388)
T ss_pred eEEEEeCCC--------HHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC-----
Confidence 788887531 12234455544211 10 010010 00 11 357999996
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 010842 476 ERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~l~~ 495 (499)
-||++.+++.|.+..+.+.+
T Consensus 367 lE~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 367 LEDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 35677777777777665543
No 149
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.7e-17 Score=169.53 Aligned_cols=340 Identities=14% Similarity=0.088 Sum_probs=214.9
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
++..+..+.....+.....|....+...+.+++.+|+.+.+|.+... . ..++|+|+++|+..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~----- 117 (403)
T PRK08636 48 PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN----- 117 (403)
T ss_pred CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC-----
Confidence 34444444443333223456666678899999999999988864321 1 368999999988777766532
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTST 259 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~ 259 (499)
++..|++++++++.+..++...|. +++.||++.++++.+|+++|.+.+++..++ ..++.+++.+.++|||
T Consensus 118 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPT 188 (403)
T PRK08636 118 ------PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPT 188 (403)
T ss_pred ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCC
Confidence 577899999999999999999999 999999864445899999876666554332 2345688888899999
Q ss_pred cccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-Cc--eeEecccccccCC-CcceEEEEeCchh
Q 010842 260 TAVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VD--SFSFSPHKWLLSY-LDCCCLWVKQPGL 332 (499)
Q Consensus 260 G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aD--si~~~~hK~l~~p-~~~g~l~~r~~~~ 332 (499)
|.+- .+++|+++|++|++|+++|.+|+.+......... +..+.. .| ..+.+..|.++.| .-+|+++.. +..
T Consensus 189 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~-~~l 266 (403)
T PRK08636 189 TATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN-KKL 266 (403)
T ss_pred CccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeeeCC-HHH
Confidence 9994 4688888999999999999999876432111111 111211 12 3356899999644 668887653 332
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
. ..+.....+.... .+ .....++...+ ..+.+++..+...+..+.+.+.|++. +++
T Consensus 267 i-~~~~~~~~~~~~~----------------~~----~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 324 (403)
T PRK08636 267 V-GALKKIKSWLDYG----------------MF----TPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWE 324 (403)
T ss_pred H-HHHHHHHHHhccc----------------CC----hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 2222211111000 00 11111111122 24556666777778888898999886 676
Q ss_pred EEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 411 IVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 411 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+..+.....+++++++.. .. ....++...+. +.|+.+..+..+. +..++|++++ .+++++++.++.|+
T Consensus 325 ~~~p~~g~~~~~~l~~~~--~~----~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~~~rl~ 395 (403)
T PRK08636 325 LQKPRASMFVWAKIPEPA--RH----LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQAARNIK 395 (403)
T ss_pred ccCCCcceEEEEECCCcc--CC----CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence 553434445555654311 00 01245555544 4565554444343 2478999995 47889999999998
Q ss_pred HHHHHH
Q 010842 488 EGADRL 493 (499)
Q Consensus 488 ~~~~~l 493 (499)
++++.+
T Consensus 396 ~~l~~~ 401 (403)
T PRK08636 396 KFLKEL 401 (403)
T ss_pred HHHHhh
Confidence 887663
No 150
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.83 E-value=1.5e-18 Score=175.60 Aligned_cols=289 Identities=18% Similarity=0.215 Sum_probs=193.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST- 200 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s- 200 (499)
...|...+||+. +++++|.+.. +++++|+.|+..++.+... ++..|+++...|.+
T Consensus 56 ~~~p~~~~le~~----lA~l~g~~~a---------v~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t 111 (391)
T TIGR01328 56 LGNPTVSNLEGR----IAFLEGTEAA---------VATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCT 111 (391)
T ss_pred CCCchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHH
Confidence 345777788887 9999998654 8999999998877765532 45678888876653
Q ss_pred ---HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 201 ---FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 201 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
+...+...|+ .++.++.+ |++++++++.++++ +|++..++|++|.+-|+++|+++|+++|+
T Consensus 112 ~~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~tk------lV~le~p~Np~G~v~dl~~I~~la~~~gi 175 (391)
T TIGR01328 112 FALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNTK------IVYFETPANPTMKLIDMERVCRDAHSQGV 175 (391)
T ss_pred HHHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 4455566787 88888753 78999998876543 78888999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||++|+.+....+ .. ..+|.++.+++|+++++.+ .|++ +.+++.+.+.......++
T Consensus 176 ~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li~~l~~~~~~~~----------- 236 (391)
T TIGR01328 176 KVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGDVVAGLI-CGKAELLQQIRMVGIKDM----------- 236 (391)
T ss_pred EEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCCceEEEE-EcCHHHHHHHHHHHHHhC-----------
Confidence 9999999976533211 11 1489999999999998765 4555 444443322211110000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cce
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFA 418 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~ 418 (499)
.+........|+.++.+ +.+..++++..++++++.+.|+++|+++-+.-| ..+
T Consensus 237 --------~g~~l~~~~a~l~l~~L--~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~ 306 (391)
T TIGR01328 237 --------TGSVISPFDAWLILRGL--KTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGG 306 (391)
T ss_pred --------CCCCCCcHHHHHHHhCc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCc
Confidence 11223455667776644 677888999999999999999999988644321 134
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCE---EEEee-----eE-------CC--EEEEEEeccCCCCc
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRV---YLTHT-----IV-------GG--LYMLRFAVGASLTD 475 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~~~-----~~-------~g--~~~lRi~~~~~~~t 475 (499)
+++|.+++. .+...++.+.|.-- |.. +..+. .+ .| .+.+|+|++
T Consensus 307 ~~s~~~~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG----- 373 (391)
T TIGR01328 307 MITFELKGG--------FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG----- 373 (391)
T ss_pred eEEEEeCCC--------HHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC-----
Confidence 788887531 12234555544211 100 00010 00 11 357999996
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGADR 492 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~ 492 (499)
-||++.+++.|.+..+.
T Consensus 374 lE~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 374 LEDADDLIADLKQALDA 390 (391)
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 35788888888877654
No 151
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=2.7e-18 Score=174.14 Aligned_cols=234 Identities=16% Similarity=0.228 Sum_probs=165.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. +++++|+.|+..++.+... ++..|+++...|.+..
T Consensus 63 ~~p~~~~Le~~----lA~l~G~~~~---------~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~ 118 (398)
T PRK07504 63 SNPTVDMFEKR----MCALEGAEDA---------RATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR 118 (398)
T ss_pred CCchHHHHHHH----HHHHhCCCee---------eEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence 35667777777 8899998765 6688999988766654321 5667888888877644
Q ss_pred HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. +...|+ +++.++ .+|+++++++|+++++ +|+++.++|++|.+-|+++|.++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~gi~ 182 (398)
T PRK07504 119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNTK------VFFLESPTNPTLEVIDIAAVAKIANQAGAK 182 (398)
T ss_pred HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence 33 345677 777774 3689999999876554 899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cc-eEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DC-CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+....+ ... ++|.++.++||+++++. .. |+++. ++..+.+.+. .++.
T Consensus 183 lvvD~a~a~~~~~~~----~~~---gaDivv~S~sK~l~g~g~~~GG~vv~-~~~~i~~~~~---~~~~----------- 240 (398)
T PRK07504 183 LVVDNVFATPLFQKP----LEL---GAHIVVYSATKHIDGQGRCLGGVVLS-DKAWIEEHLQ---DYFR----------- 240 (398)
T ss_pred EEEECCccccccCCc----hhh---CCCEEEeeccccccCCccceEEEEEe-CcHHHHHHHH---HHHH-----------
Confidence 999999976543211 111 48999999999998763 23 45544 4333322111 0110
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----CC-----------ceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----RH-----------FAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~~-----------~~~ 419 (499)
..+.......+|..++.+ +.+..++++..++++.+.+.|+++|++.-+ .| |+ .++
T Consensus 241 ------~~g~~~s~~~A~~~l~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~ 312 (398)
T PRK07504 241 ------HTGPSLSPFNAWTLLKGL--ETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTL 312 (398)
T ss_pred ------HhCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccE
Confidence 112233456677777654 778899999999999999999999987533 22 21 458
Q ss_pred EEEEecC
Q 010842 420 VCFRLNP 426 (499)
Q Consensus 420 v~f~~~~ 426 (499)
++|.+.+
T Consensus 313 ~s~~~~~ 319 (398)
T PRK07504 313 VAFELKG 319 (398)
T ss_pred EEEEeCC
Confidence 8888853
No 152
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.83 E-value=3e-18 Score=174.18 Aligned_cols=326 Identities=14% Similarity=0.077 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...+... ...|....+...+.+++.+|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------ 115 (385)
T PRK09276 46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------ 115 (385)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence 344556666555322 2345544566889999999999888863211 00246788999988777665432
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.+++..+...++..|+ +++.+|.+.+.++.+|++++++.+.+++ .+|+.+.++||||.
T Consensus 116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~ 181 (385)
T PRK09276 116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGA 181 (385)
T ss_pred -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCC
Confidence 567788899999999999999999 9999999754447899999988876443 37888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+ +++|+++|++||+|+++|.+|+.+.......... +.+......+..+..|.++.| .-+|+++..+ ... +
T Consensus 182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~-~l~-~ 259 (385)
T PRK09276 182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA-DLI-A 259 (385)
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH-HHH-H
Confidence 966 6888999999999999999998654321111111 111112235567788998755 4478887543 322 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....++... ...+...++...+ ....+++..++..+.++++.+.|++. ++++..
T Consensus 260 ~~~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 318 (385)
T PRK09276 260 GLGKVKSNVDSG--------------------VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEP 318 (385)
T ss_pred HHHHHHhhccCC--------------------CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence 222111111100 0112223333333 24556677777778888999999887 777653
Q ss_pred CCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 414 PRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 414 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
|..+. +++++.+.- ...++.+++.+ .|..+..+..+. +..++|++++ .+++++.+.++.|.+
T Consensus 319 -~~~~~~~~v~~~~~~---------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 319 -PKATFYVWAPVPKGY---------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT---VPDERIEEAVERIKK 384 (385)
T ss_pred -CCcceEEEEECCCCC---------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHhh
Confidence 43343 455553310 13456676654 575544433332 2468999996 356778777777654
No 153
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.83 E-value=6.3e-18 Score=172.40 Aligned_cols=328 Identities=14% Similarity=0.100 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ -+. ....++|+|+++|+..++.+..+.
T Consensus 44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~~----- 113 (396)
T PRK09147 44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVIDR----- 113 (396)
T ss_pred CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcCC-----
Confidence 3445555555444 23456666677889999999999988864 110 003578899999887777655321
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
|..+..|+++.+++..+..+++.+|+ +++.||++++++|.+|+++|++.+.+++ .+++.+.++||||.
T Consensus 114 ---~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~ 181 (396)
T PRK09147 114 ---DGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNPTGA 181 (396)
T ss_pred ---CCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCCcCc
Confidence 01266788899999999999999999 9999999865568999999998876543 36777899999999
Q ss_pred c---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchhhhc---CC--CCCc--eeEecccccccCC-CcceEEEEeC
Q 010842 262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHYLN---GI--ERVD--SFSFSPHKWLLSY-LDCCCLWVKQ 329 (499)
Q Consensus 262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~~~---g~--~~aD--si~~~~hK~l~~p-~~~g~l~~r~ 329 (499)
+ +.+++|+++|++|++|+++|.+|+.+.+..+ ....... .. ...+ .+..+..|.++.| ..+|+++..+
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~ 261 (396)
T PRK09147 182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence 9 4678888899999999999999987643211 0000010 01 0112 6677899965444 6788877643
Q ss_pred chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842 330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR 408 (499)
Q Consensus 330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~ 408 (499)
... +.+.....+... ....+...+++..+. .+.+++..+...+.++.+.+.|++.
T Consensus 262 -~l~-~~~~~~~~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-- 317 (396)
T PRK09147 262 -ALL-KKFLLYRTYHGC--------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-- 317 (396)
T ss_pred -HHH-HHHHHHhhhccc--------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 322 222211111100 011222333333332 3445666666677777777777763
Q ss_pred eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--------CEEEEEEeccCCCCcHHHH
Q 010842 409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--------GLYMLRFAVGASLTDERHV 479 (499)
Q Consensus 409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~di 479 (499)
+.+..+.....+.+++. .. ..++.+++. +.|..+..+..+. +..++|++++ .+++++
T Consensus 318 ~~~~~p~~g~f~~~~~~-~~----------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~---~~~~~l 383 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVP-GD----------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV---APLAEC 383 (396)
T ss_pred cCCCCCCeeEEEEEECC-CC----------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec---CCHHHH
Confidence 33333334444445543 11 245666665 4576554443331 2468999997 357789
Q ss_pred HHHHHHHHHHH
Q 010842 480 VAAWELIMEGA 490 (499)
Q Consensus 480 ~~l~~~l~~~~ 490 (499)
++.+++|.++.
T Consensus 384 ~~~l~rl~~~~ 394 (396)
T PRK09147 384 VEAAERIVDFC 394 (396)
T ss_pred HHHHHHHHHHh
Confidence 99998888764
No 154
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.83 E-value=1.4e-18 Score=175.78 Aligned_cols=287 Identities=13% Similarity=0.108 Sum_probs=191.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. +++++|+.|+..++.+... ++..|+++...|....
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~~a---------l~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGEEA---------LAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 55777788887 8999997543 8888999887776655432 5667888888877655
Q ss_pred HHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+.. .|+ ++..++ ..|+++++++++++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~-------~~d~~~l~~~i~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCD-------METEADIENKIRPNTK------LIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeC-------CCCHHHHHHhhCcCce------EEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 54433 344 454443 2478999998876443 788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+......| +. .++|.++.+.+|+++++.. .|+++.+++. +.+........+
T Consensus 179 vivD~a~a~~~~~~p----l~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~-i~~~~~~~~~~~------------ 238 (386)
T PRK06767 179 VIVDNTFCSPYLQRP----LE---LGCDAVVHSATKYIGGHGDVVAGVTICKTRA-LAEKIRPMRKDI------------ 238 (386)
T ss_pred EEEECCCcccccCCc----hh---cCCcEEEecCcceecCCCCceeEEEEeChHH-HHHHHHHHHHHh------------
Confidence 999999975432211 11 2489999999999988755 5777766542 222111100000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------CceEEEEEec
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------HFALVCFRLN 425 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~v~f~~~ 425 (499)
+-....+..|+.++.+ +.+..++++..++++++.+.|+++|+++.+.-| ..++++|.+.
T Consensus 239 --------g~~~~~~~a~l~~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~ 308 (386)
T PRK06767 239 --------GGIMAPFDAWLLLRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK 308 (386)
T ss_pred --------CCCCCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence 0011345566665544 566788899999999999999999999865422 2468899885
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEE--------EE-ee-----eE-------C--CEEEEEEeccCCCCcHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVY--------LT-HT-----IV-------G--GLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~-~~-----~~-------~--g~~~lRi~~~~~~~t~~di~~l 482 (499)
.. .....++.++|...+... +. +. .. . ..+.+|+|++ -||++.+
T Consensus 309 ~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-----lE~~~dl 375 (386)
T PRK06767 309 GG--------KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG-----LESWEDI 375 (386)
T ss_pred CC--------HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHH
Confidence 32 223456666664433111 00 10 00 0 1357999996 3567777
Q ss_pred HHHHHHHHHH
Q 010842 483 WELIMEGADR 492 (499)
Q Consensus 483 ~~~l~~~~~~ 492 (499)
++.|.+..+.
T Consensus 376 ~~dl~~al~~ 385 (386)
T PRK06767 376 VSDLEQALKK 385 (386)
T ss_pred HHHHHHHHhh
Confidence 8877776653
No 155
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=1.8e-18 Score=174.95 Aligned_cols=246 Identities=17% Similarity=0.184 Sum_probs=171.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF-- 201 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~-- 201 (499)
.|...++|+. +++++|.+.. +++++|+.|+..++.+... ++..|+++...|.+.
T Consensus 62 ~p~~~~le~~----lA~l~g~~~a---------v~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~ 117 (389)
T PRK05968 62 NPTVRAFEEM----LAKLEGAEDA---------RGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFR 117 (389)
T ss_pred ChhHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence 4566677777 8999998754 7778889888877765421 566788888887753
Q ss_pred --HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 202 --AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 202 --~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.+.+...|+ +++.++.+ |++++++++ ++++ +|++..++++++.+.|+++|+++|+++|+++
T Consensus 118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~tk------lV~ie~pt~~~~~~~dl~~i~~la~~~gi~v 180 (389)
T PRK05968 118 LFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGAK------LLYLESPTSWVFELQDVAALAALAKRHGVVT 180 (389)
T ss_pred HHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccCC------EEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence 356677888 88888642 889999887 3332 6778889999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
+||++|+.+....| ... ++|.++.+.+|++++|.+ .|+++ .+++.+.+.......++.
T Consensus 181 ivD~a~a~~~~~~p----~~~---g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g------------ 240 (389)
T PRK05968 181 MIDNSWASPVFQRP----ITL---GVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG------------ 240 (389)
T ss_pred EEECCCcchhccCc----hhc---CCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC------------
Confidence 99999976543211 112 379999999999998855 56655 444333222111111111
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC------------CceEEEEEec
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR------------HFALVCFRLN 425 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------~~~~v~f~~~ 425 (499)
-.......|..++.+ +.+..++++..++++++.+.|+++|+++.+..| ..++++|.+.
T Consensus 241 --------~~~~~~~A~~~l~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~ 310 (389)
T PRK05968 241 --------AKLSPFEAWLLLRGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR 310 (389)
T ss_pred --------CCCChHHHHHHHccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence 112345566665544 678899999999999999999999998766433 1358888886
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhc
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+ + ....++.++|...
T Consensus 311 ~-~--------~~~~~f~~~L~~~ 325 (389)
T PRK05968 311 E-G--------IDVRAFADALKLF 325 (389)
T ss_pred C-H--------HHHHHHHHhCCcc
Confidence 3 1 1245677766543
No 156
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=1.3e-17 Score=167.34 Aligned_cols=291 Identities=12% Similarity=0.074 Sum_probs=195.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
+...++.++ +++.++.+.+ ..++|+|+++++..++.+. . + ..|++..+++..+..+
T Consensus 54 ~~~~~lr~~----ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~-~~v~i~~P~y~~~~~~ 109 (354)
T PRK06358 54 PDYLELRKR----IASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------P-KKVLILAPTFAEYERA 109 (354)
T ss_pred ccHHHHHHH----HHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------C-CcEEEecCChHHHHHH
Confidence 334455555 6666677654 4689999999887666543 1 2 2477788899999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEe
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHV 281 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhv 281 (499)
++..|+ +++.+|++.+++|.+| +++.+.+.+. +.+|+.+.++||||.+-+ +++|.++|++|++|+++
T Consensus 110 ~~~~g~---~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 179 (354)
T PRK06358 110 LKAFDA---EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLII 179 (354)
T ss_pred HHHcCC---eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence 999999 9999999865568899 6665555332 336778899999999965 78888899999999999
Q ss_pred eccccchhccCccchhhhcCCCCCc--eeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVD--SFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
|.+|..+.... .....+..+...+ .+..+..|.++ ...-+|+++..++............+
T Consensus 180 De~Y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~--------------- 243 (354)
T PRK06358 180 DEAFMDFLEEN-ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW--------------- 243 (354)
T ss_pred eCcccccCCCc-cchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC---------------
Confidence 99997654321 1111111121112 45678899998 44678998775543221111111100
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
....+..+++...+.. +.+++..+...+.++.+.+.|++.+++++. +|..+.+++++.+
T Consensus 244 --------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~----------- 303 (354)
T PRK06358 244 --------SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK----------- 303 (354)
T ss_pred --------cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc-----------
Confidence 0123444555555543 334677777788889999999988887765 4565655555532
Q ss_pred HHHHHHHHHHhcCCEEEEeeeECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIVGG--LYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..++.++|.++|+.+..+..+.+ ..++|+++. +.++.++++++|+++.
T Consensus 304 -~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 -PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred -hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 24677788888866555555533 468999985 7889999999998764
No 157
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.83 E-value=1.1e-17 Score=168.92 Aligned_cols=306 Identities=12% Similarity=0.056 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH--HhHhhhhc-cCCeEEEcCCCCchhHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA--LDAVGAEN-MHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~--~~~~~~~g-~~~~~i~~s~~~H~s~~ka 204 (499)
+.+..++.+.|++++|.+.. +++++|..||+.++.+..... ....+... .++..|+.....|.|+..+
T Consensus 146 ~~~h~~LE~~LA~f~g~e~a---------ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG 216 (476)
T PLN02955 146 TTYHRLLESSLADLKKKEDC---------LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDG 216 (476)
T ss_pred hHHHHHHHHHHHHHHCCCcE---------EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHH
Confidence 33444445559999998876 999999999998887642110 00000000 1456788899999999999
Q ss_pred HHHhCC-CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 205 CKLAGV-SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 205 ~~~~G~-g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
+++... |..+++.++ .-|+++|++.|+.... ...+|++....++.|.+-|+++|.++|++||++++||.
T Consensus 217 ~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDE 286 (476)
T PLN02955 217 VRLAERQGNVEVFVYR-------HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDD 286 (476)
T ss_pred HHhccccCCceEEEeC-------CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcc
Confidence 998732 001566655 3499999999976432 23456677778899999999999999999999999999
Q ss_pred cccchhccCccchhhh--cCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCC
Q 010842 284 AYAGSACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
||+.+.+ .+..+... .++ ...|.++.+.-|.++.. .|+++.++ ... +.+ .....|++....
T Consensus 287 AH~~Gv~-G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~~~-~~l~~~~~~~ifStal---------- 351 (476)
T PLN02955 287 AHGTFVC-GENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-KWK-QLIQSRGRSFIFSTAI---------- 351 (476)
T ss_pred cccCcee-cCCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-HHH-HHHHHhCCCCeecccc----------
Confidence 9987644 22222221 222 35889999999998754 45565554 222 333 233444443210
Q ss_pred cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
....+.....++..+-.+ ..+.++..++.++|++.+ |+.+ .++++.+.+.. +...
T Consensus 352 ------pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~---------~~~a 406 (476)
T PLN02955 352 ------PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN---------QEKA 406 (476)
T ss_pred ------cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC---------HHHH
Confidence 000111222333333111 235567778888888742 4432 35777766644 3446
Q ss_pred HHHHHHHHhcCCEEE---EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYL---THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~---~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..+.++|.++|..+. .|+...+...+|++++ ..+|++||++++++|.++....
T Consensus 407 ~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~ls-A~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 407 LKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLS-AAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeC-CCCCHHHHHHHHHHHHHHHhhh
Confidence 678889999997543 2445567778999994 8899999999999999886654
No 158
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.83 E-value=1.4e-17 Score=160.21 Aligned_cols=376 Identities=16% Similarity=0.098 Sum_probs=252.2
Q ss_pred hhHHHhcCCCCC-CCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHH-HHHH-----HHcccCCccccc
Q 010842 51 PGFLRSALPDSA-PHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLG-EMLC-----ACFNSVGFNWLA 123 (499)
Q Consensus 51 ~~~l~~~~~~~~-p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~-----~~~n~~~~~~~~ 123 (499)
|.+++...+..+ +..+.++.+++.++.+...+|. ..+.|.|.-..+...|+++- .++. .+|.+++...++
T Consensus 40 P~~Ir~~~~~~~~~~~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQ 116 (450)
T COG0403 40 PPSIRKKLDTLLPLPKPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQ 116 (450)
T ss_pred CHHHHhcccccCCCCCCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhh
Confidence 556665421111 1245699999999999887776 56778886656666666666 4442 125567777778
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+.....||.+.+ +++|+|++-. +..+..++|.+- .|+..++... +.++-.++++...|+....
T Consensus 117 GrLqaLfefQtl--v~dLTGm~VA-------NASm~DeaTAaA-EAm~ma~r~~-------k~k~~~~~V~~~vhpqt~~ 179 (450)
T COG0403 117 GRLEALFEFQTL--VADLTGLDVA-------NASMLDEATAAA-EAMLMAKRVT-------KKKRNKFLVPKDVHPQTLD 179 (450)
T ss_pred HHHHHHHHHHHH--HHHHhCCCcc-------cchhhhhHHHHH-HHHHHHHHhh-------cCcCceEEecCCCCHHHHH
Confidence 888888999855 9999999875 457888888443 3333333221 1134579999999999777
Q ss_pred HHHHh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCccc-ccCChhHHHHHHHHhCCEE
Q 010842 204 VCKLA--GVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTT-AVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G-~id~l~~I~~ia~~~~~~l 279 (499)
..+.. |+|. +++.++.+ |.++|++. .+ + .+.|++..|++ +| .+.++.+|.+.+|++|..+
T Consensus 180 Vl~Tra~~~g~-~i~~~~~~-------d~~~l~~~-~~~~------~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~ 243 (450)
T COG0403 180 VLRTRAEGLGI-EIEVVDAD-------DLDDLESA-DDGD------VFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALV 243 (450)
T ss_pred HHHhhcccCce-EEEEeccc-------hhhhhhhc-cccC------eEEEEEecCCC-CCccchhHHHHHHHHhhcCCEE
Confidence 76532 3311 66666543 77888877 32 3 36888999886 67 7778999999999999988
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccc----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+|=+---...++-|. |--+||.++.+.+.++ ++.+-+|++.+|++- ....|+.|.+...+..+.+
T Consensus 244 ~v~aDplaL~LL~pP------Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~ 312 (450)
T COG0403 244 IVAADPLALGLLKPP------GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKR 312 (450)
T ss_pred EEEechhHhhccCCc------cccCCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCc
Confidence 764321111122221 2224999999999876 222348999998753 4567888887766655554
Q ss_pred cCCCcccC----CCCCCC------------cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCce
Q 010842 356 DFKDWQVG----TGRRFK------------SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHFA 418 (499)
Q Consensus 356 ~~~~~~~~----~sr~~~------------al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~ 418 (499)
.|. .++| .-||-. |+...+.+..+|.+|++++.++..+++.++++.|++.. +++++.+..+.
T Consensus 313 A~r-LaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFd 391 (450)
T COG0403 313 AFR-LALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFD 391 (450)
T ss_pred hhh-hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccccee
Confidence 443 1122 234432 22333345557999999999999999999999999664 68888777788
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+++++.. ..+..+.++....|.-+ ..+... .+-+++. ..+|++||+.+++++...
T Consensus 392 t~~v~~~~----------~~~~~l~~~~~~~G~~L---~~~~~~-~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 392 TFTVRVPE----------EVAEALLAAAIAGGINL---RRVDAD-TVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eEEEecch----------hHHHHHHHHHHhcCCce---eeecCC-ceEEEee-cccCHHHHHHHHHHHhhh
Confidence 88888753 23667777777777422 112221 4667774 889999999999998764
No 159
>PRK10534 L-threonine aldolase; Provisional
Probab=99.82 E-value=1.2e-18 Score=173.59 Aligned_cols=311 Identities=14% Similarity=0.076 Sum_probs=188.4
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+|..+..+ .... .+...|...|...++|++ +++++|.++. ++++||+++++.++.+...
T Consensus 13 ~~~~~~a~-~~~~-~~~~~Y~~~~~~~~L~~~----la~~~g~~~~---------~v~~~g~~a~~~~l~~~~~------ 71 (333)
T PRK10534 13 SRAMLEAM-MAAP-VGDDVYGDDPTVNALQDY----AAELSGKEAA---------LFLPTGTQANLVALLSHCE------ 71 (333)
T ss_pred CHHHHHHH-Hhcc-CCCcccCCCHHHHHHHHH----HHHHhCCCeE---------EEeCchHHHHHHHHHHhcC------
Confidence 34444443 3322 223345567888888888 7888898764 8889999999888876532
Q ss_pred hhhccCCeEEEcCCCCchhHHHH--HHHhC-CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKV--CKLAG-VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka--~~~~G-~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
++..|+++...|.+...+ +..+| . .++.++++. +|.+|+++|++++.++...+..+.+|+.+. ++
T Consensus 72 -----~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~ 139 (333)
T PRK10534 72 -----RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--TH 139 (333)
T ss_pred -----CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CC
Confidence 455677777777543332 34444 5 677777664 479999999999865311111233555553 44
Q ss_pred ccccCChhH---HHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 259 TTAVDNVEP---LAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 259 ~G~id~l~~---I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+|.+.|.++ |+++|++|++|+++|+||...... ........ ...|.++++++|.++.+ .|..++.+++..
T Consensus 140 ~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i 214 (333)
T PRK10534 140 NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLVGNRDYI 214 (333)
T ss_pred CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEEcCHHHH
Confidence 699977655 567889999999999997522110 11111111 12576777899988876 564444455443
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.........+ . .+-...++.+.+++..+ +...+.+++..+.++++.+.|++. |+++.
T Consensus 215 ~~~~~~~~~~-~------------------~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~- 271 (333)
T PRK10534 215 KRARRWRKMT-G------------------GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM- 271 (333)
T ss_pred HHHHHHHHHh-C------------------CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-
Confidence 2221111100 0 00001122233333333 222345555666778999999987 78765
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+|..+.+.+++.+. ...++.+.|.++|+.+ .+. ..+|++. +..+|++++++++++|+++.
T Consensus 272 ~~~~nfv~~~~~~~----------~~~~~~~~l~~~gi~v-~~~-----~~~rl~~-~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 272 RQDTNMLFVRVGEE----------QAAALGEYMRERNVLI-NAS-----PIVRLVT-HLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred CCCceEEEEECCch----------hHHHHHHHHHHcCeee-cCC-----ceEEEEE-EeCCCHHHHHHHHHHHHHHh
Confidence 45677777766431 1356677788888654 332 2489988 47789999999999998664
No 160
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.82 E-value=7.9e-18 Score=171.26 Aligned_cols=327 Identities=13% Similarity=0.024 Sum_probs=208.3
Q ss_pred HHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 105 FLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 105 ~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
.+.+.+...+. .....|...++...+.+++.+|+.+..|.+-+. . ..++|+|+++|+..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~------- 114 (388)
T PRK07366 47 HALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN------- 114 (388)
T ss_pred HHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC-------
Confidence 34444444443 223456666778899999999999888863221 1 257788999988777665432
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|++..++++.+...++..|+ +++.||+++++.|.+|++++++.+.+.+ .+|+.+.++||||.+
T Consensus 115 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPTG~~ 181 (388)
T PRK07366 115 ----PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQA------RLMVLSYPHNPTTAI 181 (388)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhcccc------eEEEEeCCCCCCCcc
Confidence 567788899999999999999999 9999999866668899999988775433 367778899999999
Q ss_pred C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-Cc--eeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
- .+++|+++|++||+|+++|.+|+-+.+........+..+.. .+ .++.+..|.++.| .-+|+++.. +..+ +
T Consensus 182 ~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~li-~ 259 (388)
T PRK07366 182 APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN-AQLI-Q 259 (388)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC-HHHH-H
Confidence 4 46777889999999999999998764321110111111111 12 4567899999655 668887753 3322 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....+... +. .......++..+ ..+.+++..++..+.++++.+.|++. ++....
T Consensus 260 ~l~~~~~~~~~------------------~~--~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~ 318 (388)
T PRK07366 260 ALRQVKAVVDF------------------NQ--YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPL 318 (388)
T ss_pred HHHHHHhhccc------------------CC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 22111111000 00 011111222222 24567777778888888899999887 665443
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.....+++++.+.- +....++.+.+. +.|+.+..+..+. +..++|++++ .+++++++.++.|.++
T Consensus 319 p~~g~f~~~~~~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPW-------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV---HDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCccc-------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec---CCHHHHHHHHHHHHHh
Confidence 444445555554310 001245666664 4576555444443 2468999996 3588899999988764
No 161
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.6e-18 Score=174.19 Aligned_cols=242 Identities=13% Similarity=0.138 Sum_probs=163.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|...++|+. ++++.|.+.. ++|++||+|+.+++.+... ++..|+++...|.+.
T Consensus 61 ~~~p~~~~le~~----lA~l~g~~~a---------v~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t 116 (433)
T PRK08134 61 ISNPTVAVLEER----VAALEGGVGA---------IATASGQAALHLAIATLMG-----------AGSHIVASSALYGGS 116 (433)
T ss_pred CcChHHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHH
Confidence 346777888887 8899987653 9999999999888776521 466788898888776
Q ss_pred HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
...+ ...|+ ++++++++ |+++|+++|+++++ +|++.+++|++|.+.|+++|+++|+++|+
T Consensus 117 ~~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi 180 (433)
T PRK08134 117 HNLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGV 180 (433)
T ss_pred HHHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCC
Confidence 5544 44688 88888763 78999999987665 78888899999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHH--hh-cCCccCCCCCCCCCC
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVK--AL-STDPEYLKNKPSESN 352 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~--~~-~~~~~yl~~~~~~~~ 352 (499)
+++||++++.+....| .. -++|.++++.|||++.+.. .|.+++.... .+.. .+ ...+.+.........
T Consensus 181 ~livD~t~a~~~~~~p----l~---~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 253 (433)
T PRK08134 181 PLLVDSTFTTPYLLRP----FE---HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFA 253 (433)
T ss_pred EEEEECCCcccccCCc----hh---cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchh
Confidence 9999999977654322 11 1499999999999987743 4445443221 1000 00 000111000000000
Q ss_pred CcccCCC--------cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 353 SVVDFKD--------WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 353 ~~~~~~~--------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
....... .....+........|..++ |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 254 EESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred hccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0000000 0011222334556665554 45889999999999999999999999987543
No 162
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.82 E-value=1.6e-18 Score=174.93 Aligned_cols=314 Identities=16% Similarity=0.147 Sum_probs=211.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
...|....+...+++++.+|+.+-.|.+.+. ...+++++|+.+++..+...... .++..|+++.+.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence 4567777788999999888888666664331 11366666666655555444320 146678899999
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE 274 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~ 274 (499)
|..+...++..|+ .++.+|++..+++.+|+++|++.+++...++..+.+|+.+.++||||..-+ +++|+++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999999 999999775556899999999999886554434567888999999999855 4555556999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCC-CC-ceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIE-RV-DSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSE 350 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~ 350 (499)
||+++++|.+|+.+....+........+. .. ..++.+..|.++.| ...|++++ ++... +.+.. ...+..
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~-~~l~~~~~~~~~----- 252 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELI-ERLRRFQRSGLS----- 252 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHH-HHHHHHHHHTTS-----
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhh-hhhhhccccccc-----
Confidence 99999999999887554322211111111 12 37788899998766 45788888 43322 22211 111111
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHh---c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEec
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---G--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN 425 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 425 (499)
......+....+ + .+.+++..++..++++++.+.|++. ++.+..++ .+.+++...
T Consensus 253 ------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~ 312 (363)
T PF00155_consen 253 ------------------SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRL 312 (363)
T ss_dssp ------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEE
T ss_pred ------------------cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEc
Confidence 122222222222 2 1267888888899999999999888 89988555 455555433
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
+. . ...++.++|.++ |+.+..+..+....++|+++ ...+++++++++++|
T Consensus 313 ~~--------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 313 DP--------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp SH--------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred cc--------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 21 1 356788888887 86655544444467899999 347899999999876
No 163
>PRK07683 aminotransferase A; Validated
Probab=99.82 E-value=8.3e-18 Score=170.86 Aligned_cols=328 Identities=11% Similarity=0.064 Sum_probs=212.7
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+..+...|...++...+++++.+|+.+..|.+.+. ....++|+|+++|+..++.+...
T Consensus 44 ~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~-------- 111 (387)
T PRK07683 44 SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE-------- 111 (387)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC--------
Confidence 445566666665444566666778999999999998877763221 01468999999998877765432
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
++..|+++..++..+..+++.+|+ +++.+|.+.+ ++.+|++++++.+.+++ .+|+++.++|+||.+
T Consensus 112 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~~ 178 (387)
T PRK07683 112 ---PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEKT------RCVVLPYPSNPTGVTL 178 (387)
T ss_pred ---CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcCC
Confidence 456788899988889999999999 9999998765 48889999999886543 367888999999998
Q ss_pred --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
+++++|+++|+++|+++++|++|+.+... +....... +...-..+..+..|.++.| .-+|++..... .. +.+
T Consensus 179 s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~-l~-~~~ 255 (387)
T PRK07683 179 SKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY-LA-KHI 255 (387)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH-HH-HHH
Confidence 45889999999999999999999876432 11111111 1112245678889999855 45788876542 22 222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.....|... + ...+...++...+ |...+++..++..+.++++.+.|.+. ++.+. ++
T Consensus 256 ~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~ 313 (387)
T PRK07683 256 LKVHQYNVT-----------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KP 313 (387)
T ss_pred HHHHHhccC-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence 211111111 0 0112222222222 44556666777778888899999876 66644 45
Q ss_pred CceEEEEEecCC-CCCCcchhHHHHHHHHHH-HHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPY-PHSGSADTEMLNRKLLDW-VNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 416 ~~~~v~f~~~~~-~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+.+.+...+. . .+ ..++... +.+.|+.+..+..+. +..++|++++ .+++++.+.+++|.++.+
T Consensus 314 ~~~~~~~~~~~~~~------~~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~---~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 314 TGAFYLFPSIGHFT------MS--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA---YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred CeeEEEEEecccCC------CC--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 545544432221 1 00 2334444 345676544444332 2478999996 368889999999988765
Q ss_pred H
Q 010842 492 R 492 (499)
Q Consensus 492 ~ 492 (499)
+
T Consensus 383 ~ 383 (387)
T PRK07683 383 Q 383 (387)
T ss_pred h
Confidence 3
No 164
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.82 E-value=5.2e-18 Score=171.94 Aligned_cols=324 Identities=15% Similarity=0.107 Sum_probs=199.7
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
....|..+++..+||++ +++++|.+. .++|+|||+|+..++.+..+ ++.+| ++..
T Consensus 45 gd~~Y~~~~g~~~Leea----ia~~~g~~~---------vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~~ 99 (431)
T cd00617 45 GDEAYAGSKSFYDLEDA----VQDLFGFKH---------IIPTHQGRGAENILFSILLK-----------PGRTV-PSNM 99 (431)
T ss_pred CCCccCCCCCHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccCC
Confidence 33568889999999999 677778764 39999999999988876532 45566 4554
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCC--------CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccC---C
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDA--------NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVD---N 264 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id---~ 264 (499)
.+.+....+.+.|. .++.+++++.. .+.+|+++|+++|++... .++.+|+++.++|++ |.+- +
T Consensus 100 ~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~ 174 (431)
T cd00617 100 HFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMAN 174 (431)
T ss_pred cccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHH
Confidence 44566677888999 99999997532 245999999999986411 123478888899987 7774 5
Q ss_pred hhHHHHHHHHhCCEEEeeccccch-hccC----ccchh-----hh-cCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGS-ACIC----PEFRH-----YL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~-~~~~----~~~~~-----~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+++|+++|++||+|+|.|+|+... +.+. +.+.. .. .-...+|++++++||.+.+|. .|+++.++++..
T Consensus 175 l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~ 253 (431)
T cd00617 175 LREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELY 253 (431)
T ss_pred HHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHH
Confidence 678899999999999999996432 1111 11111 10 012359999999999998875 567777776444
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH--HHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL--QSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~--~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
.+..... ..... +..+ ++-..+ ...++ ..|.+.. .+.+++..+.++++.+.|++. |+.+
T Consensus 254 ~~~~~~~--~~~~~---------~~~~---gG~~~r---~~~A~-A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~-G~~v 314 (431)
T cd00617 254 EEARQRV--VLYEG---------FVTY---GGMAGR---DMEAL-AQGLREAVEEDYLRHRVEQVRYLGDRLDEA-GVPI 314 (431)
T ss_pred HHHHHhc--cccCC---------cccc---ccccHH---HHHHH-HHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCCc
Confidence 3322111 00000 0000 111111 11222 1121111 345666667779999999987 8887
Q ss_pred EcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHHHh-cCCEEEEeeeE-------CC------EEEEEEeccCCCCcH
Q 010842 412 VVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWVNS-TGRVYLTHTIV-------GG------LYMLRFAVGASLTDE 476 (499)
Q Consensus 412 ~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------~g------~~~lRi~~~~~~~t~ 476 (499)
+.|...+.+.+....... ....+ .....+..+|.+ .|+..+.-+.+ .+ -..+|+++--..-|.
T Consensus 315 ~~P~Ggh~v~~d~~~~~~~~~~~~--~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~ 392 (431)
T cd00617 315 VEPAGGHAVFIDAREFLPHIPQEQ--FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQ 392 (431)
T ss_pred cCCCcceEEEEEhHHhcCCCCccc--CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCH
Confidence 755555455544432100 00000 113455544443 45443321110 11 257999985445599
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEGADR 492 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~ 492 (499)
+++|.+.++|..+.++
T Consensus 393 ~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 393 DHMDYVAAAVIALYER 408 (431)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998765
No 165
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.9e-17 Score=167.31 Aligned_cols=329 Identities=14% Similarity=0.064 Sum_probs=207.9
Q ss_pred hHHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
++..+.+.+...++.. ...|....+...+.+.+.+++.+..+..-.. ...++|+|+++++..++.....
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~--- 118 (394)
T PRK06836 47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA-----DHIVMTCGAAGALNVALKAILN--- 118 (394)
T ss_pred CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----CcEEEeCChHHHHHHHHHHhcC---
Confidence 3455666666555422 3445555677888888888888776552110 1468999999988777665422
Q ss_pred hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
++..|+++..++..+...++..|+ +++.+|++++ ++.+|+++|++++++++ .+|+++.++|+
T Consensus 119 --------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~~------~~v~~~~p~NP 180 (394)
T PRK06836 119 --------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPKT------KAVIINSPNNP 180 (394)
T ss_pred --------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcCc------eEEEEeCCCCC
Confidence 466788899999999999999999 9999999865 37899999999986543 36788889999
Q ss_pred ccccCC---hhHHHHHHHH------hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEe
Q 010842 259 TTAVDN---VEPLAEVANE------YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVK 328 (499)
Q Consensus 259 ~G~id~---l~~I~~ia~~------~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r 328 (499)
||.+-| +++|+++|++ ||+|+++|.+|..+..............+ -..+..+..|.++.| ..+|+++..
T Consensus 181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~~~~~ 259 (394)
T PRK06836 181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGYIAVN 259 (394)
T ss_pred CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC-cEEEEecchhhccCcceeeEEEecC
Confidence 999966 6777778888 89999999999875432111111111221 246778899999855 568898875
Q ss_pred Cchh----HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842 329 QPGL----LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 329 ~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~ 404 (499)
+... +...+.....+.. ......+...+....+.. +. ..++..+.++.+.+.|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 260 PEMEDADDLVAALVFANRILG-------------------FVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLT 317 (394)
T ss_pred HHHhhhHHHHHHHHHHhhccc-------------------cccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHH
Confidence 4321 0111100000000 000012222333333322 11 23445566777888888
Q ss_pred cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
+. ++++..+.....++.++.... ..++.+.+.+.|..+..+..+....++|++++ .++++++..++
T Consensus 318 ~~-g~~~~~~~gg~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~~~i~ 383 (394)
T PRK06836 318 EL-GFECVKPQGAFYLFPKSPEED----------DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTETIERSLP 383 (394)
T ss_pred hC-CCEeecCCceEEEEEeCCCCC----------HHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHHHHHHHH
Confidence 77 677653333233333443211 34556667777866555444444468999996 47899999999
Q ss_pred HHHHHHHHH
Q 010842 485 LIMEGADRL 493 (499)
Q Consensus 485 ~l~~~~~~l 493 (499)
.|+++.++.
T Consensus 384 ~l~~~l~~~ 392 (394)
T PRK06836 384 AFEKLAKEY 392 (394)
T ss_pred HHHHHHHHh
Confidence 999887653
No 166
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=167.56 Aligned_cols=285 Identities=14% Similarity=0.074 Sum_probs=191.6
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
++++.++++++.+.+ ..++|+|+++++..++.+..+ ++..|+++.++|..+...++..|+
T Consensus 64 ~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~-- 123 (353)
T PRK05387 64 ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-----------HDRPLLFPDITYSFYPVYAGLYGI-- 123 (353)
T ss_pred HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCHHHHHHHHHHcCC--
Confidence 344557777787654 469999999998888776643 567788899999888888999999
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeeccccchhcc
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAAYAGSACI 291 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A~g~~~~~ 291 (499)
+++.+|.++ +|.+|+++|++ .+ .+|+.+.++||||.+-+.+++.++++.+ ++++++|.+|+.+.
T Consensus 124 -~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~-- 188 (353)
T PRK05387 124 -PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFG-- 188 (353)
T ss_pred -EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccC--
Confidence 999999875 36899999873 11 2678889999999999999999999886 99999999996432
Q ss_pred CccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc
Q 010842 292 CPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS 370 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 370 (499)
........... .-..++.+..|.++.| ..+|+++.. ++.. +.+......... + ....
T Consensus 189 ~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~-~~l~~~~~~~~~-------------~------~~~~ 246 (353)
T PRK05387 189 GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIGH-PELI-EALNRVKNSFNS-------------Y------PLDR 246 (353)
T ss_pred CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeecC-HHHH-HHHHHhhccCCC-------------C------CcCH
Confidence 11111121111 2357788899998755 557888753 3322 222211110000 0 0123
Q ss_pred HHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 371 LRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 371 l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.++++..+.. ..++.++|.++
T Consensus 247 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~ 314 (353)
T PRK05387 247 LAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSHD----------AAELAAKLRER 314 (353)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCCC----------HHHHHHHHHHC
Confidence 34444444442 3456777788888899999999987 77754 455555555543211 35677778788
Q ss_pred CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 450 GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 450 g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
|+.+..........++|++++ +.+++++++++|+++.
T Consensus 315 gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 315 GIIVRHFNKPRIDQFLRITIG----TDEEMEALVDALKEIL 351 (353)
T ss_pred CEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHh
Confidence 865432211123468999985 5689999999998864
No 167
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=1.3e-17 Score=170.66 Aligned_cols=297 Identities=12% Similarity=0.083 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
...++.+.+++++|.+.. +++++|++||..++...... .++.+|+++...|.++..++...|
T Consensus 91 ~~~~le~~la~~~g~~~~---------~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~g 152 (406)
T PRK13393 91 YHVLLEAELADLHGKEAA---------LLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHSR 152 (406)
T ss_pred HHHHHHHHHHHHhCCCcE---------EEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHcC
Confidence 344444559999987543 77778889999988853221 034578878889999999998888
Q ss_pred CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842 210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
. +++.++. .|+++|++.++... ...+.+|++..+++++|.+.|+++|.++|+++|+++++|++|+.+.
T Consensus 153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~ 220 (406)
T PRK13393 153 A---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL 220 (406)
T ss_pred C---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc
Confidence 7 7777763 37888888775421 1234578888899999999999999999999999999999997443
Q ss_pred ccCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 290 CICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 290 ~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
+ .+..... ..++ +..|.+..+.-|.++.+. |++.. ++... +.+. ....|... .+
T Consensus 221 ~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~~~-~~~~~-~~l~~~~~~~~~t-----------------~~ 278 (406)
T PRK13393 221 Y-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYITG-SAALC-DFIRSFASGFIFT-----------------TS 278 (406)
T ss_pred c-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--ceeeC-CHHHH-HHHHHhCcCceec-----------------Cc
Confidence 2 1211111 1122 235777778899998642 55543 33322 2221 11122111 11
Q ss_pred CC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 366 RR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 366 r~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
.. ..+..+..++..+...+ ...++..++++++.+.|++. +++++ ++..+++.+.+.. .....++.+
T Consensus 279 ~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~---------~~~~~~l~~ 345 (406)
T PRK13393 279 LPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD---------PVLCKQISD 345 (406)
T ss_pred cCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC---------HHHHHHHHH
Confidence 11 11223444554442222 22355678888999999876 67655 4455666664422 123466778
Q ss_pred HHHhc-CCEEEEee----eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 445 WVNST-GRVYLTHT----IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 445 ~l~~~-g~~~~~~~----~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+|.++ |.. +.+. ...+..++|+++ +..+|++||++++++|+++.+++
T Consensus 346 ~L~~~~Gi~-v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 346 ELLDRYGIY-VQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHhCCEE-EEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 88774 754 3332 223556799999 58899999999999999987764
No 168
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.82 E-value=1.5e-18 Score=174.78 Aligned_cols=285 Identities=19% Similarity=0.201 Sum_probs=194.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. +++++|++|+..++.+... ++..|+++...|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~~a---------~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGEAA---------LAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCCCE---------EEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 56778888887 8888887543 8899999999988887632 4667888888887755
Q ss_pred H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
. .+...|+ +++.++.+ |+++++++++++ +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3 3456677 88888753 588899888653 34788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+....+ .-. ++|.++.+.+|+++.+.+ .|+++.++++.. +.+.....++
T Consensus 158 livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~------------ 217 (369)
T cd00614 158 LVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLAL------------ 217 (369)
T ss_pred EEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhh------------
Confidence 999999987643211 111 489999999999987643 677777653322 2221111110
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~ 419 (499)
+........|+.++.+ +.+..++++..++++++.+.|+++|+++-+.-| ..++
T Consensus 218 --------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i 287 (369)
T cd00614 218 --------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGV 287 (369)
T ss_pred --------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceE
Confidence 1122356667766655 667788999999999999999999887544322 3678
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----C---EEEEeee-----E-------CC--EEEEEEeccCCCCcH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----R---VYLTHTI-----V-------GG--LYMLRFAVGASLTDE 476 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~t~ 476 (499)
++|.+.+. .+...++.+.|.-- + . .+..+.. . .| ...+|+|++ .
T Consensus 288 ~s~~l~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svG-l---- 354 (369)
T cd00614 288 FSFELKGG--------LEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVG-I---- 354 (369)
T ss_pred EEEEeCCC--------HHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeC-c----
Confidence 88888642 22344555544211 1 0 0000100 0 12 357999996 2
Q ss_pred HHHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEGA 490 (499)
Q Consensus 477 ~di~~l~~~l~~~~ 490 (499)
||++.+++.|.+..
T Consensus 355 E~~~dl~~dl~~al 368 (369)
T cd00614 355 EDVEDLIADLEQAL 368 (369)
T ss_pred CCHHHHHHHHHHhh
Confidence 67888888887753
No 169
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.82 E-value=4.3e-18 Score=172.32 Aligned_cols=219 Identities=18% Similarity=0.249 Sum_probs=157.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. ++|+||++|+..++.+... ++..|+++...|.+..
T Consensus 59 ~~p~~~~le~~----la~l~g~~~~---------v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~ 114 (390)
T PRK08133 59 TNPTVTMFQER----LAALEGAEAC---------VATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV 114 (390)
T ss_pred CChHHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence 45666666666 8899987643 8999999999888776532 4667888888886543
Q ss_pred ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+...|+ +++.++++ |+++++++++++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~ie~p~NptG~v~dl~~I~~la~~~gi~ 178 (390)
T PRK08133 115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNTK------LFFLETPSNPLTELADIAALAEIAHAAGAL 178 (390)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 45567788 88888763 78899998876544 788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-c-eEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-C-CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+......| ... ++|.++.++||+++++.. . |+++.++ ..+.+.. .++..
T Consensus 179 livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g~~~GG~vv~~~-~~~~~~~----~~~~~---------- 236 (390)
T PRK08133 179 LVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQGRVLGGAVVGSK-ELMEEVF----GFLRT---------- 236 (390)
T ss_pred EEEECCCcccccCCc----hhh---CCcEEEeecceeecCCcceEeEEEEcCH-HHHHHHH----HHHHH----------
Confidence 999999876543222 111 379999999999987643 3 5555443 3222111 01100
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+........|..++ |.+.+..++++..+++..+.+.|++.|+++-+
T Consensus 237 -------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 283 (390)
T PRK08133 237 -------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERV 283 (390)
T ss_pred -------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 111223455666654 45788999999999999999999999988654
No 170
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.82 E-value=6.9e-18 Score=155.21 Aligned_cols=343 Identities=13% Similarity=0.111 Sum_probs=232.1
Q ss_pred ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHH
Q 010842 94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA 173 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~a 173 (499)
-+.|++...+..+ ..+++.|... ..+|...++.+++.+-+...|...... -=++.++|+.+.-.|+...
T Consensus 20 L~gPGPsnl~~~V----~~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 20 LLGPGPSNLSGRV----QEAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eecCCCcCCCHHH----HHhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhh
Confidence 4567766666554 4445544443 357889999999999999999875432 1166677776555444433
Q ss_pred HHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 174 RDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 174 r~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
.. |+..+++-...-.+ +...++.+|+ +|..|+.+..+ ...++.+++++.+. +|.+|.
T Consensus 89 le-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vf 147 (385)
T KOG2862|consen 89 LE-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVF 147 (385)
T ss_pred cC-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhc-----CCceEE
Confidence 22 56666655555444 5567888999 99999888755 88999999999885 377999
Q ss_pred EecCCCcccccCC-hhHHHHHHHHhCCEEEeeccc--cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842 252 ATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAY--AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK 328 (499)
Q Consensus 252 ~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~--g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r 328 (499)
+++|.+.||..+| ++.+.++||+|+..+.||++- |+--+..+++. +|..-...+|.++.|.|.+++...
T Consensus 148 v~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewg--------VDvaytgSQKaL~aP~GLsiisfS 219 (385)
T KOG2862|consen 148 VTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWG--------VDVAYTGSQKALGAPAGLSIISFS 219 (385)
T ss_pred EEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhc--------ccEEEecchhhcCCCCCcceeecC
Confidence 9999999999999 788899999999999999754 34333344443 999999999999999999998877
Q ss_pred CchhHHHhhcC---CccCCCCCCCCCCCcccCCCcccCCC-CCC--C-----cHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842 329 QPGLLVKALST---DPEYLKNKPSESNSVVDFKDWQVGTG-RRF--K-----SLRLWMVLRSYGVLNLQSHIRSDIRLAK 397 (499)
Q Consensus 329 ~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~--~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~ 397 (499)
++..- +.... ...|.++.. ...+| |+-... |.+ . -..+-++|..+-++|+++.++++.++++
T Consensus 220 ~ka~~-~~~~rK~~~~~~yFd~~----~~~~~--wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~ 292 (385)
T KOG2862|consen 220 DKALE-AIRDRKTKPVSFYFDIL----RLGNF--WGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSK 292 (385)
T ss_pred HHHHH-HHhhccCCceEEEEeHH----hhcch--hccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76432 22211 122222211 00011 000000 111 1 1245567777889999999999999999
Q ss_pred HHHHHHhcCCCeEEEc---CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCC
Q 010842 398 MFEGFVKSDPRFEIVV---PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASL 473 (499)
Q Consensus 398 ~l~~~L~~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~ 473 (499)
+++..|+++ |++++. ++.++.+.-...|.+ ..-+++..++.+++.+.+.+.- --...++||.++...
T Consensus 293 ~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g--------vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcn 363 (385)
T KOG2862|consen 293 WLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG--------VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCN 363 (385)
T ss_pred HHHHHHHHh-CccceecChhhccCcceeeecCCC--------CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeecc
Confidence 999999998 787764 233444332222322 1146677888888766554332 112346999988778
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEGADR 492 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~ 492 (499)
.+.+-|+..++.|+...++
T Consensus 364 a~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 364 ANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CCcHHHHHHHHHHHHHHhh
Confidence 8899999999999887654
No 171
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.9e-18 Score=174.67 Aligned_cols=242 Identities=14% Similarity=0.112 Sum_probs=160.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|.+..
T Consensus 67 ~~pt~~~le~~----la~l~g~~~~---------v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 67 TNPTVEALENR----IASLEGGVHA---------VAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE 122 (437)
T ss_pred cChHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence 45777777777 9999987543 8888888888766655421 5678888988998764
Q ss_pred ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+...|+ ++++++ +. .|+++|+++|+++++ +|+....+|++|.+.||++|+++|+++|+.
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~ 187 (437)
T PRK05613 123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP 187 (437)
T ss_pred HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence 44566788 899987 32 288999999987654 677778889999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCch-hHHHh--hcCCccCCCCCCCCCCC-
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPG-LLVKA--LSTDPEYLKNKPSESNS- 353 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~-~l~~~--~~~~~~yl~~~~~~~~~- 353 (499)
+|||++++.+....+ +.. ++|.++++.||+++++. +.|.+++.+.. ..... ....-+++.........
T Consensus 188 livD~t~a~g~~~~p----~~~---GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (437)
T PRK05613 188 LIVDNTIATAALVRP----LEL---GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGL 260 (437)
T ss_pred EEEECCCccccccCh----HHh---CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccc
Confidence 999999976544222 112 48999999999998763 33555553321 11000 00000011110000000
Q ss_pred -cccCC----------CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 354 -VVDFK----------DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 354 -~~~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
..++. .+....|-...+...|+.++ |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 328 (437)
T PRK05613 261 KYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKV 328 (437)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 00000 01112233344566676655 45889999999999999999999999987533
No 172
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=3.9e-18 Score=172.49 Aligned_cols=220 Identities=18% Similarity=0.172 Sum_probs=158.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. ++++.|.+.. +++++|++|+..++.+..+ ++..|+++...|.+..
T Consensus 59 ~~p~~~~Le~~----lA~~~g~~~~---------i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~ 114 (388)
T PRK07811 59 GNPTRTALEEQ----LAALEGGAYG---------RAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF 114 (388)
T ss_pred CCccHHHHHHH----HHHHhCCCce---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence 44777788887 8888988764 7778889888888776632 5667888988888654
Q ss_pred HHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+.. .|+ +++.++. .|+++|++++.++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~tk------lV~ie~p~NPtg~~~dl~~I~~la~~~gi~ 178 (388)
T PRK07811 115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRTK------LIWVETPTNPLLSITDIAALAELAHDAGAK 178 (388)
T ss_pred HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCCe------EEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence 43332 355 5665543 489999999876543 788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+.+....+ .. ..+|.++++.+|++++|.+ .|+++++++... +.+.. +...
T Consensus 179 lIvD~a~a~~~~~~p----~~---~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~~----~~~~--------- 237 (388)
T PRK07811 179 VVVDNTFASPYLQQP----LA---LGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFAF----LQNG--------- 237 (388)
T ss_pred EEEECCCCccccCCc----hh---hCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHHH----HHHh---------
Confidence 999999976543211 11 1489999999999998755 577777765432 22211 1000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+........|..++.+ +.+..++++..+++..+.+.|+++|+++-+
T Consensus 238 -------~g~~~s~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V 284 (388)
T PRK07811 238 -------AGAVPGPFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTV 284 (388)
T ss_pred -------cCCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 01112344566666554 568888999999999999999999998644
No 173
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.82 E-value=1.3e-17 Score=167.87 Aligned_cols=331 Identities=13% Similarity=0.098 Sum_probs=198.7
Q ss_pred HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
.+.+...+.... .+..+|...++|+. +++++|.+. .++|+|||+|+..++.+..- .
T Consensus 14 ~~a~~~~~~~~~-~~~~g~~~~~~e~~----la~~~g~~~---------~v~~~sgt~aL~~~l~al~~----------~ 69 (376)
T TIGR02379 14 LEYIAEAISEGK-LSGDGPFSRRCETW----LENRTGTKK---------ALLTPSCTAALEMAALLLDI----------Q 69 (376)
T ss_pred HHHHHHHHHcCC-ccCCcHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCC----------C
Confidence 444445554321 11135555666655 888888754 38999999998777665411 1
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..|+++..+|.+...++...|+ +++.+++++++ +.+|+++|+++++++++ +|+ +++++|..-|++
T Consensus 70 pGd~Viv~~~t~~~~~~~~~~~G~---~~v~vd~d~~~-~~~d~~~le~~i~~~tk------~Ii---p~~~~G~~~d~~ 136 (376)
T TIGR02379 70 PGDEVIMPSYTFVSTANAFVLRGA---KIVFVDIRPDT-MNIDETLIESAITHRTK------AIV---PVHYAGVACDMD 136 (376)
T ss_pred CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCCc-CCCCHHHHHHhcCcCce------EEE---EeCCCCCccCHH
Confidence 567899999999999999999999 99999998753 88999999999876543 555 345789999999
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN 346 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~ 346 (499)
+|.++|++||+++++|+||+.+...... ....+..+.++++.+.|.+......|++++++++...+..... .+=..
T Consensus 137 ~I~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~ 212 (376)
T TIGR02379 137 TIMALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTN 212 (376)
T ss_pred HHHHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCC
Confidence 9999999999999999999765422111 1111222445555555666543357888888765443221111 00000
Q ss_pred CCCCC-CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEEc-CCC----c
Q 010842 347 KPSES-NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP--R-FEIVV-PRH----F 417 (499)
Q Consensus 347 ~~~~~-~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~-~~~----~ 417 (499)
..... .....+. ....+.+++.-.+-+++-.-..+.+++++++.+++++++.+.|..++ + .++.. ++. .
T Consensus 213 ~~~~~~~~~~~~~--~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~ 290 (376)
T TIGR02379 213 RSQFFRGEVDKYT--WRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNA 290 (376)
T ss_pred CccccccCCCcce--eeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeee
Confidence 00000 0000000 01123333332222332222347788999999999999999998764 2 23221 111 1
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---eee-------EC---C---------EEEEEEeccCCCCc
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTI-------VG---G---------LYMLRFAVGASLTD 475 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~~---g---------~~~lRi~~~~~~~t 475 (499)
..+++++.+. ....++.+.|.++|+..-. +.. +. + ...+.+-+ ++..|
T Consensus 291 ~~~~i~~~~~---------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~-~~~l~ 360 (376)
T TIGR02379 291 HMFYIKLKDE---------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL-YYGLS 360 (376)
T ss_pred EEEEEEECCc---------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC-CCCCC
Confidence 2333444321 0145677778888863210 100 00 0 22355544 78899
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGA 490 (499)
Q Consensus 476 ~~di~~l~~~l~~~~ 490 (499)
++|+++++++|+++.
T Consensus 361 ~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 361 KEDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998863
No 174
>PRK06855 aminotransferase; Validated
Probab=99.82 E-value=2.5e-17 Score=169.47 Aligned_cols=349 Identities=13% Similarity=0.058 Sum_probs=212.9
Q ss_pred ChHHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 101 STAGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 101 ~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
.+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++-.. ...++|+|+++|+..++. ..+
T Consensus 48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~-l~~---- 117 (433)
T PRK06855 48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP-----DDIIFFNGLGDAIAKIYG-LLR---- 117 (433)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-----hHEEEcCcHHHHHHHHHH-hcC----
Confidence 34455555555544 2233467777788999999999999987764221 146899999998776653 221
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
++..|++.+++++.+..+. ...|+ .++.+|++++++|.+|+++|++++.... .+.+++.+.++||
T Consensus 118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NP 183 (433)
T PRK06855 118 -------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNP 183 (433)
T ss_pred -------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCC
Confidence 5667888989988765442 34577 8889998865568999999999986321 1236777789999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-CceeEecccccccCC-CcceEEEEeCc---
Q 010842 259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VDSFSFSPHKWLLSY-LDCCCLWVKQP--- 330 (499)
Q Consensus 259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aDsi~~~~hK~l~~p-~~~g~l~~r~~--- 330 (499)
||.+-+ +++|+++|++||+|+++|.+|+...+.......+..-... --.+..+..|.++.| .-+|++...+.
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 999955 6778888999999999999998764322111111111111 125667789999744 67999987421
Q ss_pred hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842 331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
..+...+.....+.... . + ...+...++...+. .+.+++..+...++++.+.+.|++.
T Consensus 264 ~~~~~~~~~~~~~~~~~--------------~-~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 264 EVFKKYINSILNAKMIE--------------V-C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred hHHHHHHHHHHHhhccc--------------c-C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111111100000000 0 0 01233444444442 2346666777778888899999888
Q ss_pred CCeEEEcCCCceEEEE-EecCCCC-------CCcchhHH-----------HHHHHHHH-HHhcCCEEEEeeeEC-CEEEE
Q 010842 407 PRFEIVVPRHFALVCF-RLNPYPH-------SGSADTEM-----------LNRKLLDW-VNSTGRVYLTHTIVG-GLYML 465 (499)
Q Consensus 407 ~~~~~~~~~~~~~v~f-~~~~~~~-------~~~~~~~~-----------~~~~l~~~-l~~~g~~~~~~~~~~-g~~~l 465 (499)
+++.+. +|..+.+.| ++.+... .+..+... ...++... +.+.|..++.+..+. ....+
T Consensus 326 ~~~~~~-~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~ 404 (433)
T PRK06855 326 PGLKVN-RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGF 404 (433)
T ss_pred CCeecc-CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCce
Confidence 787654 555544443 4432100 00000000 12344434 445676666555553 22459
Q ss_pred EEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 466 RFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 466 Ri~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
|+++++ .+.++|++.++.|.++.++..
T Consensus 405 Rls~~~--~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 405 RVTLLE--RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred EEEECC--CcHHHHHHHHHHHHHHHHHHh
Confidence 999963 478999999999999887654
No 175
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.3e-17 Score=165.91 Aligned_cols=312 Identities=15% Similarity=0.133 Sum_probs=201.9
Q ss_pred hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
+|..+-+.+.+.+... ...|.. +...++++. +++.+|.+... ..++|+|+++++..++.+..+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~----ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~----- 103 (356)
T PRK04870 40 LPAELRAELGERLAEVALNRYPD-PRAAALKAA----LRAAMGVPAGA------DVLLGNGSDELIQLLALACAK----- 103 (356)
T ss_pred CCHHHHHHHHHHhhccccccCCC-CCHHHHHHH----HHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC-----
Confidence 3334455555555332 233443 444455555 77777875421 357888888877666554422
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++.++|..+..+++..|+ +++.+|+++ +|.+|+++|++.+.... +.+|+++.++||||
T Consensus 104 ------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG 167 (356)
T PRK04870 104 ------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTG 167 (356)
T ss_pred ------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCC
Confidence 567788999999999999999999 999999874 36899999999986421 23677788999999
Q ss_pred ccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 261 AVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 261 ~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
.+-+.+++.++++..+.++++|++|..+.. ..+...+.... --.++.+..|++.....+|+++..+ ..+.+.....
T Consensus 168 ~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~-~vi~~~S~SK~~~~GlRiG~~i~~~-~~i~~~~~~~ 243 (356)
T PRK04870 168 NLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFP-NLLVMRTVSKLGLAGLRLGYLAGHP-AWIAELDKVR 243 (356)
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCC-CEEEEecchhhhhHHHhhhhhhCCH-HHHHHHHHcc
Confidence 999998888888877999999999976431 11111122222 1356778899433334588877643 2222211111
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 419 (499)
..+ . ...+...++...+. .+.+++..++..++++++.+.|++.+++.+. ++..+.
T Consensus 244 ~~~--~---------------------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~ 299 (356)
T PRK04870 244 PPY--N---------------------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANF 299 (356)
T ss_pred CCC--c---------------------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeE
Confidence 111 0 01233333333321 2447777888888999999999998888754 555566
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.+++.+ ..++.+.+.++|+.+.....+. +..++|++++ +.+++++++++|+++
T Consensus 300 ~~~~~~~------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 300 ILVRVPD------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred EEEECCC------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 6666531 3456777777886554443332 2468999995 688999999999875
No 176
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=4.2e-18 Score=171.67 Aligned_cols=284 Identities=17% Similarity=0.199 Sum_probs=188.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.|...++|+. +++++|.+. .+++++|+.|+..++. .. . ++..|+++...|.+..+
T Consensus 46 ~p~~~~le~~----la~l~g~~~---------~l~~~sG~~al~~~l~-ll----~-------~Gd~Vl~~~~~y~~~~~ 100 (378)
T TIGR01329 46 NPTRTALESL----LAKLDKADR---------AFAFSSGMAALDVITR-LL----N-------NGDEIIAGDDLYGGTDR 100 (378)
T ss_pred ChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHH-Hh----C-------CCCEEEEcCCCchHHHH
Confidence 4545555555 899999854 3778888876554332 21 1 56678888888877654
Q ss_pred ----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 ----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 ----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.+...|+ +++.++.+ |+++++++++++++ +|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 101 ~~~~~~~~~G~---~v~~vd~~-------d~~~le~~i~~~tk------lv~le~psnptg~v~dl~~I~~la~~~g~~v 164 (378)
T TIGR01329 101 LLTQVVPRSGV---VVVHVDTT-------DLDKVKAALGPKTK------LVLLESPTNPLQKIVDIRKISEMAHAQNALV 164 (378)
T ss_pred HHHHHHHHcCc---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCeeecHHHHHHHHHHcCCEE
Confidence 3455788 88888752 78999999875443 8999999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
+||++|+...... .... ++|.+++++|||+++|.+ .|+++++++....+..... ..
T Consensus 165 ivD~a~~~~~~~~----~l~~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~----~~----------- 222 (378)
T TIGR01329 165 VVDNTMMSPLLCN----PLEL---GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQ----NS----------- 222 (378)
T ss_pred EEECCCcccccCC----hhhc---CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHH----Hh-----------
Confidence 9999986553221 1111 489999999999998877 8888887754322211100 00
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceEE
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFALV 420 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~v 420 (499)
.+........|..++ |.+.+..++++..+++..+.+.|+++|.+. +..| | ..+++
T Consensus 223 ------~G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~ 294 (378)
T TIGR01329 223 ------TGSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVL 294 (378)
T ss_pred ------cCCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEE
Confidence 011122344455444 457889999999999999999999988763 2221 1 23578
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------E-Eee-----eE-------CC--EEEEEEeccCCCCcHH
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------L-THT-----IV-------GG--LYMLRFAVGASLTDER 477 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~-~~~-----~~-------~g--~~~lRi~~~~~~~t~~ 477 (499)
+|.+.. .....++.+.|..-+... + .+. .. .| .+.+|+|++ -|
T Consensus 295 sf~~~~---------~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-----lE 360 (378)
T TIGR01329 295 SFETGS---------VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG-----IE 360 (378)
T ss_pred EEEECC---------HHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-----cC
Confidence 888732 122445666553322111 1 111 00 11 357999997 35
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADR 492 (499)
Q Consensus 478 di~~l~~~l~~~~~~ 492 (499)
|++.+++.|.+..++
T Consensus 361 ~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 361 DVDDLISDLDIAFVT 375 (378)
T ss_pred CHHHHHHHHHHHHHh
Confidence 777788888777654
No 177
>PLN02509 cystathionine beta-lyase
Probab=99.81 E-value=4.4e-18 Score=173.88 Aligned_cols=216 Identities=17% Similarity=0.216 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----H
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----C 205 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~ 205 (499)
..+++.++++++.|.+.. ++++||+.|+ .++..... ++..|+++...|.+..+. +
T Consensus 134 t~~aLE~~lA~leg~e~a---------i~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADRA---------FCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCEE---------EEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHHH
Confidence 345555668898876543 7778887664 33333211 567788899999876643 4
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
...|+ .++.++. .|+++++++|.++++ +|++..++|++|.+.|+++|+++|+++|++++||++|
T Consensus 193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~Tk------lV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~ 256 (464)
T PLN02509 193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQTK------LVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI 256 (464)
T ss_pred HHCCe---EEEEeCC-------CCHHHHHHhCCcCCe------EEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 45677 7777753 378999998866543 8899999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+.+....+ .. .++|.++++.+||+++|.+ +|+++++++....+... +...
T Consensus 257 a~~~~~~p----l~---~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~~~---------------- 308 (464)
T PLN02509 257 MSPVLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQNS---------------- 308 (464)
T ss_pred cccccCCh----hh---cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HHHh----------------
Confidence 76643211 11 1489999999999998876 78888776543221110 0000
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+..+....+|+.++.+ +.+..++++..++++++.+.|+++|.++-+
T Consensus 309 ~g~~l~p~~A~l~lr~L--~tL~~R~~r~~~nA~~la~~L~~~p~V~~V 355 (464)
T PLN02509 309 EGSGLAPFDCWLCLRGI--KTMALRIEKQQENARKIAMYLSSHPRVKKV 355 (464)
T ss_pred cCCCcCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 01122345667666654 788999999999999999999999988533
No 178
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.2e-17 Score=169.49 Aligned_cols=220 Identities=16% Similarity=0.151 Sum_probs=155.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
..|....+|+. ++++.|.+. .+++++|++|+.+++.+... ++..|+++...|..
T Consensus 58 ~~p~~~~Le~~----lA~l~g~~~---------~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~ 113 (405)
T PRK08776 58 GNPTRDLLGEA----LAELEGGAG---------GVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSW 113 (405)
T ss_pred CChHHHHHHHH----HHHHhCCCc---------eEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHH
Confidence 34555666655 888888654 38888999887766665422 56678888888876
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+...+...|+ +++.++. .|+++|++++++++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 114 ~~~~~~~~~~g~---~v~~v~~-------~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~la~~~gi~ 177 (405)
T PRK08776 114 RLFNALAKKGHF---ALITADL-------TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIEAAHKVGAL 177 (405)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence 3333445566 6666653 37899998886544 3788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+..... +... -.+|.++.++||++++|.+ .|+++.++++...+ +.....+
T Consensus 178 vIvD~a~a~~~~~----~pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~-l~~~~~~------------- 236 (405)
T PRK08776 178 TVVDNTFLSPALQ----KPLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ-LVWWANA------------- 236 (405)
T ss_pred EEEECCCcccccC----Cccc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHH-HHHHHHh-------------
Confidence 9999999764321 1111 1489999999999998855 57777766543322 2110000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+-....+..|+.++ |.+.++.++++..+++..+.+.|+++|.++-+
T Consensus 237 -------~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V 283 (405)
T PRK08776 237 -------LGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV 283 (405)
T ss_pred -------cCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 011124566777664 55888999999999999999999999987643
No 179
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.81 E-value=4e-17 Score=167.80 Aligned_cols=320 Identities=13% Similarity=0.080 Sum_probs=207.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCC----CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 124 SPASTELEIVVMDWLATMLKL----PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~----~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
..+...+.+++.+++.+.+|. +++ ..++|+|+++|+.+.+.+..+ ++..|+++.+.+.
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~-------~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~ 155 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPD-------RIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYP 155 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHH-------HeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCc
Confidence 346678999999999988773 222 468999999988776655432 5678889999998
Q ss_pred hHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842 200 TFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY 275 (499)
Q Consensus 200 s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~ 275 (499)
.+...+. ..|+ +++.|+++.+++|.+|++++++++++..+.|.++.+|+.+.|+||+|.+-+ +++|.++|++|
T Consensus 156 ~f~~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~ 232 (447)
T PLN02607 156 GFDRDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK 232 (447)
T ss_pred chHHHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 8887776 4788 899999886556889999999999887777777778888999999999955 78889999999
Q ss_pred CCEEEeeccccchhccCccchh---hhcCC------CCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFRH---YLNGI------ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~---~~~g~------~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
++++++|.+|+...+..+.+.. ..... +++ .+..+..|.++.| .-+|+++..++... ..+.....|..
T Consensus 233 ~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~ 310 (447)
T PLN02607 233 NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTL 310 (447)
T ss_pred CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCC
Confidence 9999999999876543222222 11111 111 3567889998754 66898887655432 22221111100
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-E
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-L 419 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~ 419 (499)
. ..+...+....+.. ..+++..++..+..+.+.+.|++. +++.. ++..+ .
T Consensus 311 ------------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~f 366 (447)
T PLN02607 311 ------------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLF 366 (447)
T ss_pred ------------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEE
Confidence 0 11222333333322 223344455566677788888876 66654 34433 4
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+++++...- ... ..+...++.+++.+ .|..+..+..+. ..+++|+++++ .++++++..+++|.++.++-..
T Consensus 367 vw~~L~~~~--~~~-~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 367 CWMNLSPLL--ETP-TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred EEEEchHhh--cCC-CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHHHh
Confidence 444553210 000 01112356666665 465443333343 35799999963 4688999999999988766543
No 180
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=1.4e-17 Score=169.14 Aligned_cols=288 Identities=20% Similarity=0.222 Sum_probs=193.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...+||+. +++++|.+. .++++||+.|+..++.+... ++..|+++...|.+..
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~~---------~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGEA---------AVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 67888888888 888888654 38999999998777765432 5667888888776533
Q ss_pred ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--C
Q 010842 203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--G 276 (499)
Q Consensus 203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~ 276 (499)
..++..|+ +++.++.+ |+++++++++++++ +|++..++|++|.+.|+++|+++|+++ |
T Consensus 118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~tk------lI~iesP~NPtG~v~dl~~I~~la~~~~~~ 181 (400)
T PRK06234 118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANTK------VVYLETPANPTLKVTDIKAISNIAHENNKE 181 (400)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCCe------EEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence 44567888 88888642 78999999876544 788899999999999999999999997 9
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcC-CccCCCCCCCCCCC
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALST-DPEYLKNKPSESNS 353 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~ 353 (499)
+++++|++|+.+....+ . +. .+|.++.+.+|+++++.. .|+++.+++ .. +.+.. ...+.
T Consensus 182 i~livDea~~~~~~~~~----l--~~-g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~-~~l~~~~~~~~--------- 243 (400)
T PRK06234 182 CLVFVDNTFCTPYIQRP----L--QL-GADVVVHSATKYLNGHGDVIAGFVVGKEE-FI-NQVKLFGIKDM--------- 243 (400)
T ss_pred CEEEEECCCCchhcCCc----h--hh-CCcEEEeeccccccCCCCceeEEEEecHH-HH-HHHHHHHHHHh---------
Confidence 99999999986643211 1 11 489999999999987753 577766543 22 22211 00100
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------C
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------H 416 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~ 416 (499)
.+........|..++. .+.+..++++..++++++.+.|++.|.+.-+. | | .
T Consensus 244 ----------~g~~l~p~~a~l~~~~--l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~ 311 (400)
T PRK06234 244 ----------TGSVIGPFEAFLIIRG--MKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLP 311 (400)
T ss_pred ----------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCC
Confidence 1112345566666654 46777899999999999999999998875432 2 1 2
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EE-ee-----eE-------CC--EEEEEEeccCCC
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LT-HT-----IV-------GG--LYMLRFAVGASL 473 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~-~~-----~~-------~g--~~~lRi~~~~~~ 473 (499)
.++++|.+.+. .+...++.+.|.--+... +. +. .+ .| ...+|+|++
T Consensus 312 g~l~s~~l~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--- 380 (400)
T PRK06234 312 GAMISFELKGG--------VEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG--- 380 (400)
T ss_pred CceEEEEecCc--------HHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC---
Confidence 45788887532 122355666553322100 10 10 00 01 357999996
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l 493 (499)
-||.+.+++.|.++.+.+
T Consensus 381 --lE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 381 --LEDVDDIIADLKQALDLI 398 (400)
T ss_pred --CCCHHHHHHHHHHHHHHH
Confidence 356777777777766554
No 181
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=1.5e-17 Score=168.79 Aligned_cols=235 Identities=13% Similarity=0.146 Sum_probs=170.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch--
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS-- 199 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~-- 199 (499)
...|...++|++ ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|.
T Consensus 67 ~~~p~~~~le~~----lA~l~g~~~a---------l~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t 122 (403)
T PRK07810 67 YGNPTVSMFEER----LRLIEGAEAC---------FATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSC 122 (403)
T ss_pred CCCchHHHHHHH----HHHHhCCCcE---------EEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchH
Confidence 356777788887 8999997653 9999999998887765432 5667888876653
Q ss_pred --hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 200 --TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 200 --s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
.+.+.+...|+ +++.++. .|+++++++|+++++ +|++..++|++|.+-|+++|+++|+++|+
T Consensus 123 ~~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~ 186 (403)
T PRK07810 123 FVVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGA 186 (403)
T ss_pred HHHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCC
Confidence 34456677788 8888864 388999999977654 78899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||++|+.+....+ ... ++|.++.+.||+++++.+ .|+++.++.. +.+.+. .+...
T Consensus 187 ~vivD~a~a~~~~~~~----~~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~~-~~~~l~---~~~~~--------- 246 (403)
T PRK07810 187 KVVLDNVFATPLLQRG----LPL---GADVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQ---KLMRH--------- 246 (403)
T ss_pred EEEEECCCCccccCCh----hhc---CCcEEEccCCceecCCcCceeEEEEeChHH-HHHHHH---HHHHH---------
Confidence 9999999976543221 111 489999999999987643 5777665532 221111 01100
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------Cce
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFA 418 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~ 418 (499)
.+........|+.++. .+.+..++++..+++.++.+.|+++|.++-+. | | ..+
T Consensus 247 --------~g~~~s~~~a~l~l~~--L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~ 316 (403)
T PRK07810 247 --------TGPALSAFNAWVLLKG--LETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGT 316 (403)
T ss_pred --------hCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 1122345667776664 48899999999999999999999999876443 2 2 245
Q ss_pred EEEEEecC
Q 010842 419 LVCFRLNP 426 (499)
Q Consensus 419 ~v~f~~~~ 426 (499)
+++|.+..
T Consensus 317 ~~s~~l~~ 324 (403)
T PRK07810 317 VVTFELDA 324 (403)
T ss_pred EEEEEEcC
Confidence 78888854
No 182
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=7.7e-18 Score=169.92 Aligned_cols=218 Identities=18% Similarity=0.140 Sum_probs=158.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|...++|+. +++++|.+.. ++++||+.|+..++.+... ++..|+++...|.+.
T Consensus 50 ~~np~~~~lE~~----lA~l~g~~~~---------l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~ 105 (385)
T PRK08574 50 EENPTLRPLEEA----LAKLEGGVDA---------LAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT 105 (385)
T ss_pred CCCccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence 455777888888 8999987543 8889999998888775532 567788899999987
Q ss_pred HHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 202 AKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 202 ~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
...++. .|+ +++.++ +|+++|++++++ ++ .+|++..++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~~la~~~gi 168 (385)
T PRK08574 106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVAKAAKELGA 168 (385)
T ss_pred HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence 776644 355 555542 367889888865 33 378889999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
++++|++|+.+.... .+.. ++|.++.+.||++++|.+ .|++++++++...+..... .+
T Consensus 169 ~livD~t~a~~~~~~----~l~~---GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~------------ 228 (385)
T PRK08574 169 ILVVDNTFATPLLYR----PLRH---GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RR------------ 228 (385)
T ss_pred EEEEECCCCccccCC----hhhh---CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hh------------
Confidence 999999997654321 1112 489999999999998865 4656666654332211110 01
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
.|.....+..|..++. .+.+..++++..+++.++.+.|+++|.++
T Consensus 229 --------~g~~~~p~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 229 --------LGTIMQPFEAYLVLRG--LKTLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred --------cCCCCCHHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 1112234555666554 47788899999999999999999999875
No 183
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=1.2e-17 Score=169.13 Aligned_cols=290 Identities=17% Similarity=0.165 Sum_probs=192.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|...++|+. ++++.|.+.. +++++|++|+..++.+... ++..|+++...|.+.
T Consensus 61 ~~~p~~~~le~~----lA~l~g~~~~---------i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~ 116 (398)
T PRK08249 61 NTNPTVQAFEEK----VRILEGAEAA---------TAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT 116 (398)
T ss_pred CCChHHHHHHHH----HHHHhCCCeE---------EEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence 456777777777 8899987553 8888889888877765432 566788898999865
Q ss_pred HH----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 202 AK----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 202 ~k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
.. .+...|+ +++.++ ..|+++++++|+++++ +|++..++|++|.+.|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~ie~p~NPtg~v~dl~~I~~la~~~gi 180 (398)
T PRK08249 117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGCD------LLYLETPTNPTLKIVDIERLAAAAKKVGA 180 (398)
T ss_pred HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCCe------EEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence 43 3456677 776664 2589999999876543 78888999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++||++|+.+.... ... ..+|.++.+.+|+++++.+ .|.+++.+++...+..... .+
T Consensus 181 ~livD~t~a~~~~~~----~l~---~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~------------- 239 (398)
T PRK08249 181 LVVVDNTFATPINQN----PLA---LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI------------- 239 (398)
T ss_pred EEEEECCcCccccCC----chh---hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh-------------
Confidence 999999998643221 111 1489999999999987643 2333444444332211110 00
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~ 419 (499)
.+........|+.++. .+.+..++++..++++.+.+.|+++|.++-+. | | ..++
T Consensus 240 -------~g~~~s~~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~ 310 (398)
T PRK08249 240 -------NGATMDPMSAYLILRG--MKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGI 310 (398)
T ss_pred -------cCCCCCHHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCce
Confidence 1112345666766664 47788899999999999999999999886442 2 1 1357
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHh--cCC-------EEEEee-----eE-------CC--EEEEEEeccCCCCcH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS--TGR-------VYLTHT-----IV-------GG--LYMLRFAVGASLTDE 476 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~-----~~-------~g--~~~lRi~~~~~~~t~ 476 (499)
++|.+... .+...++++.|.- .+. .+..+. .. .| ...+|+|++ -
T Consensus 311 ~sf~~~~~--------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-----l 377 (398)
T PRK08249 311 LSFVLKGG--------MDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVG-----I 377 (398)
T ss_pred EEEEEcCC--------HHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-----c
Confidence 88877531 2224455555421 110 011010 00 11 357999996 3
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 010842 477 RHVVAAWELIMEGADRLF 494 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~l~ 494 (499)
||++.+++.|.+..+.+.
T Consensus 378 E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 378 EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 567777777777766544
No 184
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.8e-17 Score=166.55 Aligned_cols=232 Identities=15% Similarity=0.156 Sum_probs=164.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|... .++++||++|+..++.+..+ ++..|+++...|....
T Consensus 59 ~npt~~~Le~~----iA~le~~~~---------~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAA----IVELEGGAG---------TALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 35766788877 667666533 48999999998887766532 5677888888886665
Q ss_pred HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. +...|+ ++..++.+ +.+.+++++.++++ +|+++.++|++|.+.|+++|+++||++|+|
T Consensus 115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~Tk------lV~lespsNPtg~v~dl~~I~~la~~~g~~ 178 (394)
T PRK09028 115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNTK------VLFLESPGSITMEVQDVPTLSRIAHEHDIV 178 (394)
T ss_pred HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 344677 77766532 45778888866554 899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.....-|. -. +||.+..+.|||++++.+ .|++ +.+++...+ +.....+
T Consensus 179 lvvD~t~a~p~~~~Pl----~~---GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~-l~~~~~~------------- 236 (394)
T PRK09028 179 VMLDNTWASPINSRPF----EM---GVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQ-LREHSYL------------- 236 (394)
T ss_pred EEEECCccccccCCcc----cc---CceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHH-HHHHHHh-------------
Confidence 9999999876432221 11 499999999999998844 4544 455433221 1110000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~ 419 (499)
.|....+...|..++ |.+.+.-++++..++|..+.+.|+++|.++-+ .| | ..++
T Consensus 237 -------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 307 (394)
T PRK09028 237 -------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGL 307 (394)
T ss_pred -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCce
Confidence 122234566776665 45789999999999999999999999987543 22 1 2457
Q ss_pred EEEEec
Q 010842 420 VCFRLN 425 (499)
Q Consensus 420 v~f~~~ 425 (499)
++|.+.
T Consensus 308 ~sf~l~ 313 (394)
T PRK09028 308 FSFVLK 313 (394)
T ss_pred EEEEEC
Confidence 888885
No 185
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.80 E-value=4.4e-17 Score=166.05 Aligned_cols=326 Identities=14% Similarity=0.074 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
|..+.+.+...+. ....|....+..++.+++.+|+.+.+|.+.... .....++|+|+++|+..++.+..+
T Consensus 43 ~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~--~~~~i~it~Ga~~al~~~~~~l~~------- 112 (393)
T TIGR03538 43 PAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVD--PERHVLPVNGTREALFAFAQAVIN------- 112 (393)
T ss_pred CHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCC--CCceEEECCCcHHHHHHHHHHHcC-------
Confidence 4456666665443 234566566678899999999999887652100 001357899999988877766542
Q ss_pred hhccCC--eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 183 AENMHK--LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 183 ~~g~~~--~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++ ..|+++.+++..+...++..|+ +++.||++++++|.+|+++|++++.++++ +|+.+.++||||
T Consensus 113 ----~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~k------~i~l~~p~NPtG 179 (393)
T TIGR03538 113 ----PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRCQ------LLFVCSPGNPTG 179 (393)
T ss_pred ----CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcce------EEEEeCCCCCcC
Confidence 33 3488888899989999999999 99999997655689999999998865433 677789999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCc-cchhh---hcCCC--C--CceeEecccccc-cCCCcceEEEEe
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHY---LNGIE--R--VDSFSFSPHKWL-LSYLDCCCLWVK 328 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~---~~g~~--~--aDsi~~~~hK~l-~~p~~~g~l~~r 328 (499)
.+-+ +++|+++|++|++++++|.+|+.+..... ..... ..... . --.++.+..|.+ ....-+|+++..
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~ 259 (393)
T TIGR03538 180 AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD 259 (393)
T ss_pred cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC
Confidence 9955 78999999999999999999986543210 00010 11110 0 125678899964 445678887764
Q ss_pred CchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842 329 QPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 329 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~ 407 (499)
. ..+ +.+.....+.. .....+..++++..+. .+.+++..++..+..+.+.+.|++.
T Consensus 260 ~-~l~-~~~~~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 260 A-EIL-KAFLRYRTYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred H-HHH-HHHHHHHHhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 3 222 22211111110 0112333444444442 3445666666777777788888764
Q ss_pred CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--------CEEEEEEeccCCCCcHHH
Q 010842 408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--------GLYMLRFAVGASLTDERH 478 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~d 478 (499)
+.+..+.....+++++. .. ..++.+.+.+ .|+.+..+..+. +..++|++++ .++++
T Consensus 317 -~~~~~p~gg~f~~~~~~-~~----------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~---~~~~~ 381 (393)
T TIGR03538 317 -LDLELPDAGFYLWPKVP-GD----------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV---APLEE 381 (393)
T ss_pred -CcccCCCeeEEEEEECC-CC----------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec---CCHHH
Confidence 33333334444445553 11 2456666654 576554444331 2468999986 25788
Q ss_pred HHHHHHHHHHH
Q 010842 479 VVAAWELIMEG 489 (499)
Q Consensus 479 i~~l~~~l~~~ 489 (499)
+++.+++|.++
T Consensus 382 l~~~l~~l~~~ 392 (393)
T TIGR03538 382 CVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHh
Confidence 99999888764
No 186
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.80 E-value=3.9e-17 Score=164.64 Aligned_cols=282 Identities=14% Similarity=0.114 Sum_probs=180.6
Q ss_pred HHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
+++.+++++|.+.+ ..++ ++|+++++..++.+... ++..|+++.+.+..+...++..|+
T Consensus 74 lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~-- 133 (361)
T PRK00950 74 LREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA-- 133 (361)
T ss_pred HHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 34447777888654 3466 55666665555544321 456788888888888888899999
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC 292 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~ 292 (499)
+++.+|.+. +|.+|+++|++.+..++ .+|+++.++|+||.+-|+++|.++|+++|+++++|++|+.+. .
T Consensus 134 -~~~~~~~~~--~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~--~ 202 (361)
T PRK00950 134 -KPVYAKREE--DFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA--E 202 (361)
T ss_pred -EEEEeecCC--CCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--c
Confidence 999998654 46899999999885432 367778999999999999999999999999999999997653 1
Q ss_pred ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842 293 PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL 371 (499)
Q Consensus 293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 371 (499)
............ -.+..+..|.++.| ...|+++..++ +.+.+....... . ...+
T Consensus 203 ~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~--~~~~~~~~~~~~----------------~------~~~~ 257 (361)
T PRK00950 203 YDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPEW--LIDYYMRAKTPF----------------S------LTRL 257 (361)
T ss_pred cchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCHH--HHHHHHHhcCCC----------------C------CCHH
Confidence 122222222111 24456788998755 34677766432 222221110000 0 1133
Q ss_pred HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842 372 RLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG 450 (499)
Q Consensus 372 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g 450 (499)
....+...+. .+.+++..++..++++++.+.|. +++. ++..+.+++++.+.. ..++.++|.++|
T Consensus 258 ~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~----------~~~~~~~l~~~g 322 (361)
T PRK00950 258 SQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMT----------AKEFCEELLKRG 322 (361)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCC----------HHHHHHHHHHCC
Confidence 4444444443 23356666666666666666664 4443 455566666663221 456777787888
Q ss_pred CEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 451 RVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 451 ~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+.+..+..+. +..++|++++ +.+++++++++|+++.
T Consensus 323 v~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 323 VIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred EEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 5544433332 3468999985 6789999999998764
No 187
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.9e-17 Score=167.53 Aligned_cols=286 Identities=16% Similarity=0.182 Sum_probs=190.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH-
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF- 201 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~- 201 (499)
..|....+|+. ++++.|.+.. +++++|+.|+..++. ... ++..|+++...|.+.
T Consensus 52 ~~p~~~~le~~----lA~l~g~~~~---------v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 52 GNPTREALEDI----IAELEGGTKG---------FAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY 106 (390)
T ss_pred CChhHHHHHHH----HHHHhCCCCe---------EEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence 45777778877 8999997653 777888887765553 221 456788888888643
Q ss_pred ---HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 202 ---AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 202 ---~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.+.++..|+ +++.++.+ |+++++++++++++ +|+++.++|++|.+.|+++|.++|+++|++
T Consensus 107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~tk------lV~l~~p~NptG~~~dl~~I~~la~~~g~~ 170 (390)
T PRK08064 107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNTK------LFYVETPSNPLLKVTDIRGVVKLAKAIGCL 170 (390)
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence 355666888 89998753 68899988876554 889999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+....+. .. ++|.++.++|||+++|.+ .|++++++++...+......
T Consensus 171 vvvD~a~~~~~~~~~~----~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--------------- 228 (390)
T PRK08064 171 TFVDNTFLTPLLQKPL----DL---GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--------------- 228 (390)
T ss_pred EEEECCCCcccccCch----hh---CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH---------------
Confidence 9999999765432221 11 389999999999988876 58888876543322111110
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~ 419 (499)
..+....+...|..+ .|.+.+..++++..+++..+.+.|+++|.+. +..+ | ..++
T Consensus 229 ------~~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~ 300 (390)
T PRK08064 229 ------SFGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAV 300 (390)
T ss_pred ------hcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceE
Confidence 011112344566544 3556778999999999999999999988763 2221 1 2357
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHh------cCC---EEEEe-----eeE-------CC--EEEEEEeccCCCCcH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS------TGR---VYLTH-----TIV-------GG--LYMLRFAVGASLTDE 476 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~---~~~~~-----~~~-------~g--~~~lRi~~~~~~~t~ 476 (499)
++|.+.. .+...++++.+.- -|. .+..+ ... .| ...+|+|++ ...++
T Consensus 301 ~sf~~~~---------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvG-le~~~ 370 (390)
T PRK08064 301 LSFTLQS---------EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG-LENVD 370 (390)
T ss_pred EEEEECC---------HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHH
Confidence 8888743 1123344444321 010 00000 000 12 357999996 76777
Q ss_pred HHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEG 489 (499)
Q Consensus 477 ~di~~l~~~l~~~ 489 (499)
+.|+.+.++|.++
T Consensus 371 dli~dl~~Al~~~ 383 (390)
T PRK08064 371 DLIADFEQALSYV 383 (390)
T ss_pred HHHHHHHHHHHhc
Confidence 7777777777663
No 188
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=1.5e-17 Score=169.75 Aligned_cols=239 Identities=15% Similarity=0.184 Sum_probs=162.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST- 200 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s- 200 (499)
...|....||++ ++++.|.+. .++++||+.|+..++..... ++..|+++...|..
T Consensus 61 ~~~p~~~~Le~~----lA~leg~~~---------al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t 116 (431)
T PRK08248 61 IMNPTTDVFEKR----IAALEGGIG---------ALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGT 116 (431)
T ss_pred CCCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhH
Confidence 346777788887 899998654 39999999998888776532 56678888877754
Q ss_pred ---HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 201 ---FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 201 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
+...++..|+ +++.|+. .|+++++++|+++++ +|++..++|++|.+-|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~tk------lV~l~sp~NPtG~v~di~~I~~la~~~gi 180 (431)
T PRK08248 117 YNLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKTK------ALFAETIGNPKGDVLDIEAVAAIAHEHGI 180 (431)
T ss_pred HHHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3445667888 8888875 388999998865443 78888999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccC--CCCCCCCCCCc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEY--LKNKPSESNSV 354 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~y--l~~~~~~~~~~ 354 (499)
+++||++|+......| .. -++|.++.+.|||++.|.. .|.+++.+.... ......| +.....+....
T Consensus 181 ~vIvD~t~a~~~~~~p----l~---~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 250 (431)
T PRK08248 181 PLIVDNTFASPYLLRP----IE---HGADIVVHSATKFIGGHGTSIGGVIVDSGKFD---WKGSGKFPGLTEPDPSYHGL 250 (431)
T ss_pred EEEEeCCCCccccCCh----hH---cCCCEEEEcCccccCCCCCceEEEEEeCCccc---cccccccccccCCccccccc
Confidence 9999999975432222 11 1499999999999998853 566666433211 0000000 11000000000
Q ss_pred --cc-----------CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 355 --VD-----------FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 355 --~~-----------~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+ ........|....+...|+.++ |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V 319 (431)
T PRK08248 251 VYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV 319 (431)
T ss_pred hhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 00 0000112233445566666554 45888899999999999999999999997643
No 189
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.5e-17 Score=168.34 Aligned_cols=290 Identities=14% Similarity=0.097 Sum_probs=194.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. ++++.|.+. +++++|||+|+..++.+... ++..|+++...|....
T Consensus 63 ~~pt~~~Le~~----lA~l~g~~~---------~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~ 118 (394)
T PRK07050 63 ATPTSLALAQR----LAEIEGGRH---------ALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR 118 (394)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence 45666777776 888888643 48999999999988876632 5778999998988755
Q ss_pred ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+...|+ +++.++.. +.++++++|+++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~tk------lV~le~p~Np~~~~~di~~I~~ia~~~gi~ 182 (394)
T PRK07050 119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNTR------LIWLEAPGSVTMEVPDVPAITAAARARGVV 182 (394)
T ss_pred HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence 35567788 88887642 44678888765443 788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+.+... +.+.. ++|.++.+.+|++++..+ .|++++++++...+.... ..++
T Consensus 183 livD~a~a~~~~~----~~l~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-~~~~------------ 242 (394)
T PRK07050 183 TAIDNTYSAGLAF----KPFEH---GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-RMRL------------ 242 (394)
T ss_pred EEEECCccccccc----CHHHc---CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-HHhc------------
Confidence 9999999776432 22222 389999999999987655 577777766533222111 0111
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~ 419 (499)
|-...+...|.+++. .+.+..++++..+++..+.+.|++.|.+.-+..| ..++
T Consensus 243 --------G~~~~~~~a~l~lr~--l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~ 312 (394)
T PRK07050 243 --------GIGVSADDCSLVLRG--LPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGL 312 (394)
T ss_pred --------CCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceE
Confidence 111234556766653 4677889999999999999999999987644311 1345
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EEeee-----E----CCEEEEEEeccCCCCcHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LTHTI-----V----GGLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~~~~-----~----~g~~~lRi~~~~~~~t~~di~~l 482 (499)
+.|.+.+.. + .+...++.+.|..-+... +.+.. . ...+.+|+|++ -||++.+
T Consensus 313 ~s~~l~~~~--~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG-----lE~~~dl 381 (394)
T PRK07050 313 FSVVFDERY--S----PAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIG-----LEDEADL 381 (394)
T ss_pred EEEEECCCC--C----HHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeC-----cCCHHHH
Confidence 777775421 0 122345555554332110 11110 0 01157999996 3567777
Q ss_pred HHHHHHHHHHH
Q 010842 483 WELIMEGADRL 493 (499)
Q Consensus 483 ~~~l~~~~~~l 493 (499)
++.|.+..+..
T Consensus 382 ~~dl~~al~~~ 392 (394)
T PRK07050 382 IADLEQALEAA 392 (394)
T ss_pred HHHHHHHHHHh
Confidence 77777776654
No 190
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=9.5e-18 Score=168.11 Aligned_cols=283 Identities=13% Similarity=0.119 Sum_probs=191.0
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
.++.+++++.+|.+.+ ..++|+|+++++..++.+... ++ ..|+++.++|..+...++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4566779999999765 468999999988777765432 33 6788899999999999999999
Q ss_pred CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccch
Q 010842 211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGS 288 (499)
Q Consensus 211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~ 288 (499)
+++.+|.++ +|.+|++++++++ +++ .+|+++.++||||.+-+.+++.++++.. +.++++|+||..+
T Consensus 122 ---~~~~v~~~~--~~~~d~~~l~~~~-~~~------~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f 189 (351)
T PRK01688 122 ---EIRTVPTLD--NWQLDLPAIADNL-DGV------KVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF 189 (351)
T ss_pred ---EEEEeecCC--CCCCCHHHHHHhc-cCC------cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 999999875 3799999999887 333 3788889999999998877777776542 6899999999765
Q ss_pred hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
... +.......... --.+.-+..|+++.| ..+|+++... +.. +.+. ...+|-
T Consensus 190 ~~~-~s~~~~~~~~~-n~iv~rSfSK~~glaGlRiGy~i~~~-~~i-~~l~~~~~~~~---------------------- 243 (351)
T PRK01688 190 CPQ-ASLAGWLAEYP-HLVILRTLSKAFALAGLRCGFTLANE-EVI-NLLLKVIAPYP---------------------- 243 (351)
T ss_pred CCC-CChHHHHhhCC-CEEEEecchHhhcCHHHHHhHHhCCH-HHH-HHHHhccCCCC----------------------
Confidence 311 11112222111 124667789988744 4468877543 332 2222 111110
Q ss_pred CCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL 443 (499)
Q Consensus 367 ~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~ 443 (499)
...+...++...+ +.+.+++.++...+.++++.+.|+++++++.+.++..+.+.+++.+ ..++.
T Consensus 244 -v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~------------~~~l~ 310 (351)
T PRK01688 244 -LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA------------SSAVF 310 (351)
T ss_pred -CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC------------HHHHH
Confidence 0122222233333 2345677777777888999999999888754556666766666532 35677
Q ss_pred HHHHhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 444 DWVNSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 444 ~~l~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+.|.++|+.+...... ....++|+++. +++|+++++++|+
T Consensus 311 ~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 311 KSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred HHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 8888888655443333 22468999995 6799999999873
No 191
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=2.1e-17 Score=166.00 Aligned_cols=286 Identities=15% Similarity=0.163 Sum_probs=191.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|++ ++++.|.+. .++++||++|+..++.+... ++..|++++..|....
T Consensus 48 gnPt~~~lE~~----lA~l~g~~~---------~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~ 103 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGAG---------CYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR 103 (377)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence 45777888888 888888654 38899999999888876532 5667888888886655
Q ss_pred HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. +...|+ ++..++.. +.++|+++++++++ +|+++.++|++|.+.||++|+++|+++|+|
T Consensus 104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~tk------lV~lesp~Np~g~~~dl~~I~~la~~~g~~ 167 (377)
T TIGR01324 104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNTK------VLFLEAPSSITFEIQDIPAIAKAARNPGIV 167 (377)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 345677 77776532 22778888866544 899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+...-| +.. ++|.++.+.|||++++.+ .|+++.++ +.+.+... ..++.
T Consensus 168 livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~--~~~~~----------- 226 (377)
T TIGR01324 168 IMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLRE--HSYLM----------- 226 (377)
T ss_pred EEEECCCccccccCc----ccc---CceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHH--HHHHh-----------
Confidence 999999987654322 111 499999999999988755 56665543 33221110 11111
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~ 419 (499)
|....+...|..++. .+.+..++++..++|..+.+.|++.|.++ +..| | ..++
T Consensus 227 --------G~~l~p~~a~~~~rg--l~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~ 296 (377)
T TIGR01324 227 --------GQMVDADDAYTTLRG--LRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGL 296 (377)
T ss_pred --------CCCCCHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCce
Confidence 112234566766664 47778889999999999999999999874 3322 1 2467
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EEe-e-e----------ECCEEEEEEeccCCCCcHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LTH-T-I----------VGGLYMLRFAVGASLTDERHV 479 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~~-~-~----------~~g~~~lRi~~~~~~~t~~di 479 (499)
++|.+.... .+...++.+.|..-+... +.+ . . ..+ ..+|+|++ -||.
T Consensus 297 ~s~~l~~~~-------~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~-~liR~svG-----lE~~ 363 (377)
T TIGR01324 297 FSFVLQRLT-------QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEG-PLIRVHIG-----LENV 363 (377)
T ss_pred EEEEECCCC-------HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCC-CEEEEEeC-----CCCH
Confidence 888885421 122345666554322110 110 0 0 012 46999996 2467
Q ss_pred HHHHHHHHHHHHH
Q 010842 480 VAAWELIMEGADR 492 (499)
Q Consensus 480 ~~l~~~l~~~~~~ 492 (499)
+.+++.|.+..+.
T Consensus 364 ~dl~~dl~~al~~ 376 (377)
T TIGR01324 364 DDLKADLKAGFEA 376 (377)
T ss_pred HHHHHHHHHHHhc
Confidence 7777777776543
No 192
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=1.4e-16 Score=162.71 Aligned_cols=333 Identities=14% Similarity=0.048 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..... +...++ .....|....+..++.+++.+|+.+.+|.+-.. ....++|+|+++++..++.+..+
T Consensus 46 ~~~~~~-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~------ 114 (405)
T PRK09148 46 QHIVDK-LCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA------ 114 (405)
T ss_pred HHHHHH-HHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC------
Confidence 333333 444443 223456655677899999999998887864211 01368999999998777765532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++.++|..+...+...|+ +++.||++.++.+ ++++++.+.... .++.+|+.+.++||||.
T Consensus 115 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~---~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~ 180 (405)
T PRK09148 115 -----PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEEF---FPALERAVRHSI---PKPIALIVNYPSNPTAY 180 (405)
T ss_pred -----CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCCC---ccCHHHHHhhcc---ccceEEEEeCCCCCCCc
Confidence 566788899999999888899999 9999999765434 444555554221 13458889999999999
Q ss_pred cCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+. ++|.++|++||+++++|.+|+.+.......... +.+......++.+..|.++.| .-+|+++. ++..+ +
T Consensus 181 ~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i-~ 258 (405)
T PRK09148 181 VADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLI-A 258 (405)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHH-H
Confidence 9665 678889999999999999998754321111111 111111234578889999855 55788875 33322 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....++... ...+...++...+ +...+++..++..+.++++.+.|++. ++.+.
T Consensus 259 ~l~~~~~~~~~~--------------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~- 316 (405)
T PRK09148 259 ALTRVKSYLDYG--------------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP- 316 (405)
T ss_pred HHHHHHHHhccC--------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence 222211111110 0122333333333 23456666777788888899999886 66544
Q ss_pred CCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+|..+ .+++++++.. ... ...++.+.+. +.|+.+..+..+. +..++|+++. .+.+.+++.++.|.++
T Consensus 317 ~p~~g~f~~~~l~~~~--~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~ 387 (405)
T PRK09148 317 PPAASMFAWAPIPEAF--RHL----GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRF 387 (405)
T ss_pred CCCeeEEEEEECCCcc--CCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 34434 4444543310 000 1245566655 5676555444443 2468999985 4678888888888887
Q ss_pred HHHH
Q 010842 490 ADRL 493 (499)
Q Consensus 490 ~~~l 493 (499)
.+++
T Consensus 388 l~~~ 391 (405)
T PRK09148 388 LSSA 391 (405)
T ss_pred HHHH
Confidence 6654
No 193
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=7.8e-17 Score=162.26 Aligned_cols=289 Identities=13% Similarity=0.086 Sum_probs=192.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++..+++++ +++.+|.+.+ ..++|+|+++++..++.+..+ ++..|+++.+++..+...
T Consensus 64 ~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~v~~~~p~y~~~~~~ 121 (359)
T PRK03158 64 GYAPELRTK----VAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN-----------PGTNTVMAEPTFSQYRHN 121 (359)
T ss_pred CcHHHHHHH----HHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCHHHHHHH
Confidence 445555555 6666777544 468899999887665554422 466788899999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD 282 (499)
+...|. +++.+|++ + +.+|+++|++.+.+++ .+|+++.++||||.+-+.++|.++++. +|+++++|
T Consensus 122 ~~~~g~---~~~~~~~~-~--~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D 189 (359)
T PRK03158 122 AIIEGA---EVREVPLK-D--GGHDLEAMLKAIDEQT------KIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD 189 (359)
T ss_pred HHHcCC---eEEEEecC-C--CCcCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 999999 99999987 3 4799999998875433 367778999999999999999999887 59999999
Q ss_pred ccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 283 AAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 283 ~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
++|..+..... ......... .-..+..+..|.++.| .-+|+++... +.+ +.+......
T Consensus 190 e~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~~~~---------------- 250 (359)
T PRK03158 190 EAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNIARPP---------------- 250 (359)
T ss_pred CchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHH-HHHHHhcCC----------------
Confidence 99977543211 111111111 1245667888999855 5578887643 222 222111000
Q ss_pred cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
+ ....+...++...+. .+.+++..+...+..+++.+.|++. ++.+. ++..+.+++.+.. .
T Consensus 251 ~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-~---------- 311 (359)
T PRK03158 251 F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-D---------- 311 (359)
T ss_pred C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-C----------
Confidence 0 012344555555543 2345556666677778888888887 67665 4455555555421 1
Q ss_pred HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
..++.+.|.++|..+..+..+....++|++++ +.+++++++++|+++
T Consensus 312 ~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 35677777778866555444544578999985 789999999999875
No 194
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.7e-17 Score=169.08 Aligned_cols=310 Identities=15% Similarity=0.138 Sum_probs=193.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|....
T Consensus 67 ~~p~~~~Le~~----lA~l~g~~~a---------v~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~ 122 (436)
T PRK07812 67 MNPTQDVVEQR----IAALEGGVAA---------LLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY 122 (436)
T ss_pred CCchHHHHHHH----HHHHhCCCeE---------EEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence 35777777777 8999987654 8999999998888765532 4667888877777655
Q ss_pred HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. +...|+ .++.++ + ..|+++++++|+++++ +|++..++|++|.+.|+++|+++||++|++
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-d-----~~d~e~l~~ai~~~tk------lV~ie~~sNp~G~v~Dl~~I~~la~~~gi~ 187 (436)
T PRK07812 123 NLFHYTLPKLGI---EVSFVE-D-----PDDLDAWRAAVRPNTK------AFFAETISNPQIDVLDIPGVAEVAHEAGVP 187 (436)
T ss_pred HHHHHHhhcCeE---EEEEEC-C-----CCCHHHHHHhCCCCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 43 334566 777775 2 2389999998876543 788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHH-----hhcCCccCCCCCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVK-----ALSTDPEYLKNKPSES 351 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~-----~~~~~~~yl~~~~~~~ 351 (499)
++||++++......+ .. .++|.++.+.||+++++.+ .|.+++.+.. .+.. .....++|........
T Consensus 188 liVD~t~a~~~~~~p----l~---~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (436)
T PRK07812 188 LIVDNTIATPYLIRP----LE---HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL 260 (436)
T ss_pred EEEECCCcccccCCc----hh---cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence 999999976543221 11 1499999999999987633 4555554321 1100 0011122211000000
Q ss_pred CCcc---cCC-CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC------------
Q 010842 352 NSVV---DFK-DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR------------ 415 (499)
Q Consensus 352 ~~~~---~~~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------ 415 (499)
+... ... .+....|-.......|..++ |.+.+..++++..++|..+.+.|+++|.++-+.-|
T Consensus 261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 338 (436)
T PRK07812 261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAK 338 (436)
T ss_pred chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 0000 000 00111233344556665554 55889999999999999999999999987544211
Q ss_pred ------CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEeee-----E-------CC--EEEEE
Q 010842 416 ------HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHTI-----V-------GG--LYMLR 466 (499)
Q Consensus 416 ------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~g--~~~lR 466 (499)
..++++|.+.+. .+...++.+.|.-- |. .+..+.. . .| ...+|
T Consensus 339 ~~~~~g~gg~~sf~l~~~--------~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR 410 (436)
T PRK07812 339 RLAPKGTGAVLSFELAGG--------VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR 410 (436)
T ss_pred HhCcCCCceEEEEEecCC--------HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 134778877532 12244555554211 11 0111110 0 12 35799
Q ss_pred EeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 467 FAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 467 i~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+|++ -||++.+++.|.++.+..
T Consensus 411 lSvG-----lEd~~dli~dl~~Al~~~ 432 (436)
T PRK07812 411 LAVG-----IEGIDDILADLEAGFAAA 432 (436)
T ss_pred EEec-----cCCHHHHHHHHHHHHHhh
Confidence 9996 356777777777776654
No 195
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.79 E-value=2.9e-17 Score=166.92 Aligned_cols=221 Identities=17% Similarity=0.163 Sum_probs=158.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
..|....+|+. ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|..
T Consensus 63 ~~p~~~~le~~----lA~l~g~~~~---------i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~ 118 (403)
T PRK07503 63 SNPTLALLEQR----MASLEGGEAA---------VALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF 118 (403)
T ss_pred CCchHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence 45667777777 8999998654 8888999987777664321 56678888777654
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+...+...|+ +++.++.+ |+++|+++++++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~ 182 (403)
T PRK07503 119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK 182 (403)
T ss_pred HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345566788 88888753 78999999876544 788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+.+.... .. + -.+|.++.+.+|+++++.+ +|+++ .+++...+...... ..
T Consensus 183 lIvD~a~a~~~~~~----~l--~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~---~~---------- 241 (403)
T PRK07503 183 VVVDNTYCTPYLQR----PL--E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGL---KD---------- 241 (403)
T ss_pred EEEECCCcccccCC----ch--h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhH---Hh----------
Confidence 99999997653211 11 1 1489999999999997754 67666 45443322110000 00
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
..+-+...+..|+.++. .+.+..++++..+++..+.+.|+++|.++.+
T Consensus 242 ------~~g~~~s~~~a~l~l~~--L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 ------MTGAVMSPFDAFLLMRG--LKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ------CcCCCCCHHHHHHHHcC--cchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 01223345666776664 4788888999999999999999999987644
No 196
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.79 E-value=2e-16 Score=166.50 Aligned_cols=299 Identities=17% Similarity=0.203 Sum_probs=196.0
Q ss_pred HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842 136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI 215 (499)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v 215 (499)
+..++.||.+.++ ++++|+|.+|..++.++.. ++..|++++++|.|+..++.+.|+ .+
T Consensus 202 ~~aA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---~P 259 (713)
T PRK15399 202 EYIARTFGAEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---VP 259 (713)
T ss_pred HHHHHHhCCCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---ee
Confidence 5599999999987 8899999999988887653 678899999999999999999999 99
Q ss_pred EEeeCCCCCC---CccCH-----HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE-Eeecccc
Q 010842 216 RALPTSVDAN---FSLSP-----QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV-HVDAAYA 286 (499)
Q Consensus 216 ~~v~~~~~~~---~~~d~-----~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l-hvD~A~g 286 (499)
++++...+.. +.+++ +.++++|++... -.+|..+++|.+| ..|.+-++++|+++| |+.+ |||+|||
T Consensus 260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhg 334 (713)
T PRK15399 260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWV 334 (713)
T ss_pred EEecccccccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccch
Confidence 9987654321 23455 899999987543 2567888888885 589999999999999 6766 8999999
Q ss_pred chhccCccchh--hhcCCCCCcee---EecccccccCCCcceEEEEeCch---hHHHhh----cCCccCCCCCCCCCCCc
Q 010842 287 GSACICPEFRH--YLNGIERVDSF---SFSPHKWLLSYLDCCCLWVKQPG---LLVKAL----STDPEYLKNKPSESNSV 354 (499)
Q Consensus 287 ~~~~~~~~~~~--~~~g~~~aDsi---~~~~hK~l~~p~~~g~l~~r~~~---~l~~~~----~~~~~yl~~~~~~~~~~ 354 (499)
+...+.|.+++ .+.+...+|.+ +.|.||.|.+-..++++.++..- .+.+++ +.+|.|+--
T Consensus 335 ah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~Lm-------- 406 (713)
T PRK15399 335 PYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIV-------- 406 (713)
T ss_pred hhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHH--------
Confidence 98877765542 22232357877 99999999988899999997631 222222 122222211
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcCCCc-eEEEEEecC
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVPRHF-ALVCFRLNP 426 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~~~~ 426 (499)
..+-.+.+.+. ..| ++++++..+++..+++.|.++++ |+++.+... ..-||.+.|
T Consensus 407 ----------------ASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p 469 (713)
T PRK15399 407 ----------------ASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAP 469 (713)
T ss_pred ----------------HHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCC
Confidence 12222333332 233 55777788888888888887766 566542100 001121111
Q ss_pred C-------------------C---------CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842 427 Y-------------------P---------HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER 477 (499)
Q Consensus 427 ~-------------------~---------~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~ 477 (499)
. + ...+ +...--...+.+.|.+.|+. +.-+ +...+=+.+ ++..|++
T Consensus 470 ~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~-~E~~---d~~~vL~l~-s~g~t~~ 544 (713)
T PRK15399 470 GEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIV-VEKT---GPYNLLFLF-SIGIDKT 544 (713)
T ss_pred CcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHH
Confidence 0 0 0000 00011134455666667743 2222 223344444 4778999
Q ss_pred HHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGAD 491 (499)
Q Consensus 478 di~~l~~~l~~~~~ 491 (499)
++++++++|.++-+
T Consensus 545 ~~~~L~~aL~~f~~ 558 (713)
T PRK15399 545 KAMGLLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 197
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=4.3e-17 Score=166.19 Aligned_cols=308 Identities=13% Similarity=0.135 Sum_probs=190.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....||++ ++++.|.+.. +++++|++|+..++.+... ++..|+++...|....
T Consensus 56 ~~pt~~~Le~~----lA~l~g~~~~---------l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 56 MNPTNDVLEQR----VAALEGGVGA---------LAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY 111 (425)
T ss_pred CCchHHHHHHH----HHHHhCCCce---------eEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 34666777777 8888886543 8899999998888876542 4556777777766444
Q ss_pred HHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+. ..|+ ++.+++. .|+++|+++++++++ +|++..++|++|.+-|+++|+++|+++|++
T Consensus 112 ~~~~~~l~~~gi---~v~~~d~-------~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~ 175 (425)
T PRK06084 112 NLLAHTLPRIGI---ETRFAAH-------DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP 175 (425)
T ss_pred HHHHHhccccee---EEEEECC-------CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence 4332 2455 5555542 489999999976544 788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHh------h-cCCccCCCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKA------L-STDPEYLKNKPS 349 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~------~-~~~~~yl~~~~~ 349 (499)
++||++|+.+....| ... ++|.++.+.|||++.+.. .|++..++....... + ...+.|..-...
T Consensus 176 vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (425)
T PRK06084 176 LIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT 248 (425)
T ss_pred EEEECCCcccccCCh----hhc---CCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence 999999986543211 111 499999999999987743 444443332111010 0 111222110000
Q ss_pred CCCCcccC-----CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C---------
Q 010842 350 ESNSVVDF-----KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P--------- 414 (499)
Q Consensus 350 ~~~~~~~~-----~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~--------- 414 (499)
..-+...+ .......+.+......|+.++. .+.+..++++..+++..+.+.|+++|.++-+. |
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrg--l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~ 326 (425)
T PRK06084 249 EAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQG--LETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHE 326 (425)
T ss_pred hhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcC--cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHH
Confidence 00000000 0001123444456667766654 48899999999999999999999999876442 2
Q ss_pred ------CC--ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEee-----eE-------CC--EE
Q 010842 415 ------RH--FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHT-----IV-------GG--LY 463 (499)
Q Consensus 415 ------~~--~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~g--~~ 463 (499)
+. .++++|.+.+. .+...++.+.|.-- |. .+..+. .. .| ..
T Consensus 327 ~~~~~~~g~~gg~~s~~~~~~--------~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~ 398 (425)
T PRK06084 327 LARRYMGGKPASILSFGIKGG--------QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRD 398 (425)
T ss_pred HHHHhCCCCcceEEEEEecCC--------HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCC
Confidence 11 34788887542 12234455554211 11 011111 00 11 35
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 464 MLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+|+|++ -||.+.+++.|.++.+.
T Consensus 399 liR~svG-----lEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 399 MVRLSIG-----IEHIDDIIADLAQALDA 422 (425)
T ss_pred eEEEEec-----cCCHHHHHHHHHHHHHh
Confidence 7999996 36777788888777654
No 198
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=8e-17 Score=164.90 Aligned_cols=327 Identities=11% Similarity=0.062 Sum_probs=201.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc-cCCeEEEcCCCCchhH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN-MHKLVVYGSDQTHSTF 201 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g-~~~~~i~~s~~~H~s~ 201 (499)
.++...++|++ +++++|.+. .++++|||+|++.++.+....+... .+ .++..|+++..+|.+.
T Consensus 61 ~G~~~~~fe~~----lA~~~g~~~---------~v~~~sGt~al~~aL~al~~~~~~~---~~~~pGd~VIv~~~t~~a~ 124 (438)
T PRK15407 61 TGRFNDAFEKK----LAEFLGVRY---------ALLVNSGSSANLLAFSALTSPKLGD---RALKPGDEVITVAAGFPTT 124 (438)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHhhccccc---cCCCCCCEEEECCCCcHHH
Confidence 46767778877 888888764 3899999999999888763221110 01 1567899999999999
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
..++...|+ .++.++++.+ ++.+|+++|++++.++++ +|++++ ++|...++++|.++|+++|+++++
T Consensus 125 ~~~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIe 191 (438)
T PRK15407 125 VNPIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIE 191 (438)
T ss_pred HHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEE
Confidence 999999999 9999998754 579999999999876543 566665 367788999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC-------------C-
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN-------------K- 347 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~-------------~- 347 (499)
|+||+.+....... ...+..+-.+++.+.|.+.+. +.|++++++++......... .+=.. .
T Consensus 192 Daa~a~G~~~~g~~---~G~~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~ 266 (438)
T PRK15407 192 DNCDALGSTYDGRM---TGTFGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRF 266 (438)
T ss_pred ECccchhhhcCCee---eeccCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHH-HhCccccccccccccccccc
Confidence 99998765432211 111223445556666766553 45888888876442221110 00000 0
Q ss_pred CCCCCC-cccCC-Cc-ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEc-CCCc----e
Q 010842 348 PSESNS-VVDFK-DW-QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-EIVV-PRHF----A 418 (499)
Q Consensus 348 ~~~~~~-~~~~~-~~-~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~-~~~~----~ 418 (499)
....+. ...+. .+ ....|..++.-.+.+++-....+.+++++++..++++++.+.|..+++. .+.. ++.. .
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK15407 267 GWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWF 346 (438)
T ss_pred ccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEE
Confidence 000000 00000 00 0112333344444455544455889999999999999999999988753 2221 1121 1
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---E-eee----ECC----------------EEEEEEeccCCCC
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---T-HTI----VGG----------------LYMLRFAVGASLT 474 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~-~~~----~~g----------------~~~lRi~~~~~~~ 474 (499)
.+.+.+.+.. .....++.+.|.++|+-.- . +.. +.. ...+-+= +++..
T Consensus 347 ~~~i~~~~~~-------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP-~~~~l 418 (438)
T PRK15407 347 GFPITVKEDA-------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIG-VYPGL 418 (438)
T ss_pred EEEEEECCcC-------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEec-CCCCC
Confidence 2333343210 0113567777777776221 1 100 000 1112222 36778
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGAD 491 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~ 491 (499)
|++|+++++++|+++.+
T Consensus 419 ~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 419 TEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 199
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=1.4e-17 Score=166.61 Aligned_cols=234 Identities=15% Similarity=0.160 Sum_probs=165.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|...+||++ ++++.|.+. +++++||++|+..++. +.. ++..|+++...+...
T Consensus 51 ~~~p~~~~le~~----lA~leg~~~---------~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~ 105 (364)
T PRK07269 51 TKNPTRAKLEET----LAAIESADY---------ALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS 105 (364)
T ss_pred CCCccHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence 456778888888 788887543 4899999999887774 321 456677776655433
Q ss_pred HHHHHHh-CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 202 AKVCKLA-GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 202 ~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
...+... .-+ . +.+ .|.+|+++++++|+++++ +|++..++|++|.+.|+++|+++|+++|++++
T Consensus 106 ~~~~~~~~~~~--~---~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vv 170 (364)
T PRK07269 106 FRWFNQQEKEG--R---FHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVI 170 (364)
T ss_pred HHHHHHHHhcC--c---EEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEE
Confidence 2222211 110 1 111 135689999999977654 89999999999999999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
||++|+...... ..- ..+|.+++|.||+++++.+ .|++++++++...+..... .+
T Consensus 171 vD~t~~~~~~~~----pl~---~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~~--------------- 227 (364)
T PRK07269 171 VDNTFYSPIYQR----PIE---LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-NT--------------- 227 (364)
T ss_pred EECCCcccccCC----chh---hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH-HH---------------
Confidence 999986643221 111 1499999999999998766 6777777665332221100 00
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEEEEEec
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALVCFRLN 425 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~ 425 (499)
.|.....+..|..++.+ +.+..++++..+++.++.+.|+++|.++ +..|+..++++|.+.
T Consensus 228 -----~G~~~s~~~a~l~~~~L--~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 228 -----TGAVLSPFDSYLLMRGL--KTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred -----hCCCCCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 12233566777777655 6789999999999999999999999875 444777889999885
No 200
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=2.4e-17 Score=166.00 Aligned_cols=286 Identities=17% Similarity=0.191 Sum_probs=188.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|....||+. ++++.|.+.. +++++|+.|+..++ .+.. ++..|+++...|...
T Consensus 47 ~~~p~~~~Le~~----la~l~g~~~a---------l~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t 101 (380)
T PRK06176 47 SGNPTRFALEEL----IADLEGGVKG---------FAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGT 101 (380)
T ss_pred CCChhHHHHHHH----HHHHhCCCCE---------EEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHH
Confidence 455777788887 8999987654 88888888775433 3321 566788888777653
Q ss_pred H----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 202 A----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 202 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
. +.+...|+ +++.++. .|+++++++++++++ +|++..++|++|.+.|+++|+++|+++|+
T Consensus 102 ~~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t~------lV~lesP~Nptg~~~di~~I~~la~~~gi 165 (380)
T PRK06176 102 FRLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNTK------ALYLETPSNPLLKITDLAQCASVAKDHGL 165 (380)
T ss_pred HHHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCce------EEEEECCCCCCceecCHHHHHHHHHHcCC
Confidence 3 44556777 7777764 389999998876543 78889999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||++|+......| . + ..+|.+++++||++++|.+ .|++..+++....+ +.. +..
T Consensus 166 ~vivD~t~a~~~~~~p----~--~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~-~~~----~~~--------- 224 (380)
T PRK06176 166 LTIVDNTFATPYYQNP----L--L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQE-IAF----FQN--------- 224 (380)
T ss_pred EEEEECCccccccCCc----c--c-cCCCEEEecCceeccCCccceeeEEEecHHHHHHH-HHH----HHH---------
Confidence 9999999976432211 1 1 1489999999999998764 67777666543221 111 000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cce
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFA 418 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~ 418 (499)
..+....+...|..++ |.+.+..++++..+++..+.+.|++.|.++-+.-| ..+
T Consensus 225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~ 295 (380)
T PRK06176 225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSG 295 (380)
T ss_pred -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 0111122344565554 55778889999999999999999999988644221 135
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEeee-----E-------CC--EEEEEEeccCCCCc
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHTI-----V-------GG--LYMLRFAVGASLTD 475 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~t 475 (499)
+++|.+.. .+...++++.|.-- |. .+..+.. + .| .+.+|+|++
T Consensus 296 ~~s~~~~~---------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----- 361 (380)
T PRK06176 296 MLSFTLKN---------DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG----- 361 (380)
T ss_pred EEEEEECC---------HHHHHHHHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec-----
Confidence 67787753 12234555554321 10 0111110 0 11 357999996
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGADR 492 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~ 492 (499)
-||++.+++.|.++.+.
T Consensus 362 lE~~~dli~dl~~Al~~ 378 (380)
T PRK06176 362 IEHEQDLLEDLEQAFAK 378 (380)
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 35677777777776654
No 201
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.79 E-value=4.7e-17 Score=167.76 Aligned_cols=303 Identities=14% Similarity=0.064 Sum_probs=200.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|....+..++.+.+.+|+.+..+.++ ..++|+|+++|+..++.+..+ ++..|++..+++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~--------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAF--------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcC--------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 344444556787787777765444332 358999999988877776543 5678999999999
Q ss_pred hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---HHHHHHHHh
Q 010842 200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE---PLAEVANEY 275 (499)
Q Consensus 200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~---~I~~ia~~~ 275 (499)
.+...++..|+ +++.||++++ .+|+++|++++++.+ .+++++ .++||||.+-+.+ +|.++|+++
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 9999999754 489999999886532 255555 8999999997765 999999999
Q ss_pred -CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 276 -GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 276 -~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
++|+++|.+|+.+... + ....+.....--.+..++.|.++...-+|+++... ... +.+.....+...
T Consensus 245 ~~~~ii~De~Y~~~~~~-~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~-~~~-~~~~~~~~~~~~-------- 312 (431)
T PRK15481 245 PQVLVIIDDHFALLSSS-P-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDS-ATS-ARLRLRLNSGTQ-------- 312 (431)
T ss_pred CCceEEecCchhhhccC-C-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCH-HHH-HHHHHHHhcccc--------
Confidence 9999999999866421 1 11111111112356678899999446688776543 222 222111011000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCC
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGV----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHS 430 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~ 430 (499)
....+..+++...+.. +.+++..+...+..+.+.+.|++. ++++..+...+.+++++...
T Consensus 313 ------------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~--- 376 (431)
T PRK15481 313 ------------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD--- 376 (431)
T ss_pred ------------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC---
Confidence 0123444444444422 235566777778888888889886 67654444555555555321
Q ss_pred CcchhHHHHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..++.+.+.++|+.+..+..+. +..++|+++++ .++++++.+++.|+++..
T Consensus 377 --------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 --------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred --------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 3456677777887766554442 13579999963 468999999999988753
No 202
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.9e-17 Score=164.49 Aligned_cols=290 Identities=13% Similarity=0.126 Sum_probs=196.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|-...+|+. ++++-|... ++++++|+.|+.+++.+... ++..|+++...|..+
T Consensus 59 ~~nPt~~~le~~----la~LEg~~~---------a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t 114 (395)
T PRK08114 59 RGTLTHFSLQEA----MCELEGGAG---------CALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPT 114 (395)
T ss_pred CCChhHHHHHHH----HHHHhCCCe---------EEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHH
Confidence 456888889988 888877654 48888899998877765532 567788888888776
Q ss_pred HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-
Q 010842 202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG- 276 (499)
Q Consensus 202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~- 276 (499)
...+ ...|+ ++.+++. .|.++++++|+++++ +|.+..++|++|.+.||++|+++||++|
T Consensus 115 ~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~ 178 (395)
T PRK08114 115 QDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVNP 178 (395)
T ss_pred HHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhCC
Confidence 6554 45688 8888763 367899999977654 8999999999999999999999999985
Q ss_pred -CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 277 -IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 277 -~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
+.++||++|+.+...-| +-. +||.++.+.|||++++. .+|+++.+ ++.... +... .+
T Consensus 179 g~~lvVDnT~a~p~~~~p----l~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~-l~~~-~~---------- 238 (395)
T PRK08114 179 DAVIMIDNTWAAGVLFKA----LDF---GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQ-LREN-SY---------- 238 (395)
T ss_pred CCEEEEECCCccccccCH----HHc---CCcEEEEcCcccccCCCcceeEEEEcC-HHHHHH-HHHH-HH----------
Confidence 99999999987654222 112 49999999999999984 56766544 322211 1100 00
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------C
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------H 416 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~ 416 (499)
..|....+...|+.++ |.+.+.-++++..++|..+.++|+++|.++-+ .| | .
T Consensus 239 ---------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~ 307 (395)
T PRK08114 239 ---------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGS 307 (395)
T ss_pred ---------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCC
Confidence 1122334566776655 45888899999999999999999999988643 22 1 2
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHh--c----CCE--EEE---eeeE--------C--CEEEEEEeccCCCCc
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNS--T----GRV--YLT---HTIV--------G--GLYMLRFAVGASLTD 475 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~----g~~--~~~---~~~~--------~--g~~~lRi~~~~~~~t 475 (499)
.++++|.+.... + .+...++++.+.- . |.+ .+. +... . ..+.+|+|++
T Consensus 308 gg~~sf~l~~~~--~----~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvG----- 376 (395)
T PRK08114 308 SGLFSFVLKKKL--T----DEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIG----- 376 (395)
T ss_pred ceEEEEEecCcc--c----HHHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEec-----
Confidence 457888875410 0 1123344444321 0 100 011 0000 0 1157999996
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGADRL 493 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~l 493 (499)
-||++.+++.|.+..+.+
T Consensus 377 lEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 377 LEDVDDLIADLAAGFARI 394 (395)
T ss_pred cCCHHHHHHHHHHHHHhh
Confidence 357778888887776643
No 203
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.79 E-value=6.1e-17 Score=170.35 Aligned_cols=300 Identities=15% Similarity=0.190 Sum_probs=197.7
Q ss_pred HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842 136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI 215 (499)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v 215 (499)
+..++.||.+.++ ++++|+|.+|..++.++.. ++..|++++++|.|+..++.+.|+ .+
T Consensus 202 ~~AA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---~P 259 (714)
T PRK15400 202 EYIARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---TP 259 (714)
T ss_pred HHHHHHhCCCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eE
Confidence 5599999999987 8899999999988777643 677899999999999999999999 99
Q ss_pred EEeeCCCCCC---CccC-----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 216 RALPTSVDAN---FSLS-----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 216 ~~v~~~~~~~---~~~d-----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
++++...+.. +.++ .+.++++|++... -.+|+.+++|.+ |..|.+-++++|+++|+.++ +|||.|||+
T Consensus 260 VYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchh
Confidence 9987654321 2345 8999999987543 256778888888 46899999999999999887 799999999
Q ss_pred hhccCccchh--hhcCCCCC---c--eeEecccccccCCCcceEEEEeCc---hhHHHhh----cCCccCCCCCCCCCCC
Q 010842 288 SACICPEFRH--YLNGIERV---D--SFSFSPHKWLLSYLDCCCLWVKQP---GLLVKAL----STDPEYLKNKPSESNS 353 (499)
Q Consensus 288 ~~~~~~~~~~--~~~g~~~a---D--si~~~~hK~l~~p~~~g~l~~r~~---~~l~~~~----~~~~~yl~~~~~~~~~ 353 (499)
...+.|.++. .+. .++ | .++.|.||.+.+-..++++.++.. +.+.+++ +.+|.|+.-
T Consensus 336 h~~F~p~~~~~sam~--~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~------- 406 (714)
T PRK15400 336 YTNFSPIYEGKCGMS--GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIV------- 406 (714)
T ss_pred hhccCcccCCcChhh--cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHH-------
Confidence 8877776542 121 234 5 899999999988878888877553 1222222 122222211
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcCCCc-eEEEEE---
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVPRHF-ALVCFR--- 423 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~--- 423 (499)
..+-.+.+.+..+.-++.+++..+.+..+++.|.++++ |+++.+... ..-||.
T Consensus 407 -----------------ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 407 -----------------ASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred -----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence 12222333332222356778888888899999988877 777642210 001121
Q ss_pred -------------------------ecCCCCCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842 424 -------------------------LNPYPHSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER 477 (499)
Q Consensus 424 -------------------------~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~ 477 (499)
..+.+...+ .+..--...+.+.|.+.|++ +.-+ +...+=+.+ ++..|++
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~-~E~~---d~~~iLfl~-s~g~t~~ 544 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIV-VEKT---GPYNLLFLF-SIGIDKT 544 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHH
Confidence 111000000 00111133455666666743 2222 223344445 4779999
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADR 492 (499)
Q Consensus 478 di~~l~~~l~~~~~~ 492 (499)
+++.++++|.++-+.
T Consensus 545 ~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 545 KALSLLRALTDFKRA 559 (714)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987543
No 204
>PRK08175 aminotransferase; Validated
Probab=99.79 E-value=3.3e-16 Score=159.63 Aligned_cols=335 Identities=13% Similarity=0.083 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
++.....+.....+.....|....+..++++++.+|+.+.+|.+-+. ....++|+|+++++...+.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~------ 113 (395)
T PRK08175 44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD------ 113 (395)
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence 34344444433333333556666678899999999999887764210 01358899988887665544322
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|++++++|..+...++..|+ +++.||+++++ .++++|++++++. ...+.+|+.+.++|+||.
T Consensus 114 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~---~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~ 179 (395)
T PRK08175 114 -----HGDTVLVPNPSYPIHIYGAVIAGA---QVRSVPLVEGV---DFFNELERAIRES---YPKPKMMILGFPSNPTAQ 179 (395)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHcCC---eEEEEecccCC---CcHHHHHHHHhhc---cCCceEEEEeCCCCCCCC
Confidence 567798999999998888899999 99999998653 3588898887642 112347777888999999
Q ss_pred cCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-+. ++|+++|++||+++++|.+|+.+........... .+......++.+..|.++.| ..+|++.. +++.. +
T Consensus 180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~-~ 257 (395)
T PRK08175 180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELV-S 257 (395)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHH-H
Confidence 8666 7999999999999999999976543110111111 11111224568899999766 44787764 44332 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.....+.... . ..+...++...+ ....+++..++..+.++++.+.|++. ++++..
T Consensus 258 ~~~~~~~~~~~~-----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~ 316 (395)
T PRK08175 258 ALARIKSYHDYG-----------------T---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEM 316 (395)
T ss_pred HHHHHHhhcccC-----------------C---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence 322211111000 0 111222222222 23445666677778888999999887 676553
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+.....+++++.+.- .. ....++..++. +.|+.+..+..+. +..++|++++ .+++.+.+.++.|.++.
T Consensus 317 p~~g~~i~i~l~~~~--~~----~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 317 PKASMYVWAKIPEPY--AA----MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CCEEEEEEEECCccc--CC----CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHH
Confidence 445556666664321 00 01355666655 4575444433332 3468999985 46888999999888877
Q ss_pred HH
Q 010842 491 DR 492 (499)
Q Consensus 491 ~~ 492 (499)
++
T Consensus 388 ~~ 389 (395)
T PRK08175 388 RA 389 (395)
T ss_pred Hh
Confidence 64
No 205
>PLN02242 methionine gamma-lyase
Probab=99.79 E-value=3.7e-17 Score=166.33 Aligned_cols=223 Identities=15% Similarity=0.128 Sum_probs=155.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...+||+. +++++|.+.. ++++||++|+..++.+... ++..|+++...+....
T Consensus 74 ~~Pt~~~LE~~----lA~l~g~~~~---------l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~ 129 (418)
T PLN02242 74 FNPTVLNLGRQ----MAALEGTEAA---------YCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH 129 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCeE---------EEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 46777788877 8999998764 8899999999988876643 5667888888776665
Q ss_pred HHH-----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 203 KVC-----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 203 ka~-----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
..+ +..|+ +++.++. .|+++|+++|++. ++.+|++..++|++|.+.|+++|+++|+++|+
T Consensus 130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi 194 (418)
T PLN02242 130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV 194 (418)
T ss_pred HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence 554 34566 6666653 2889999988653 13478899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||.+|+.+. ..+ ... .+|+++.+.+|+++++.. +|+++. +++.+...........
T Consensus 195 ~livDea~~~~~-~~~----~~~---g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~----------- 254 (418)
T PLN02242 195 TVVVDNTFAPMV-LSP----ARL---GADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGAL----------- 254 (418)
T ss_pred EEEEECCCCccC-CCH----HHc---CCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhh-----------
Confidence 999999996432 211 111 389999999999987754 466654 3333322211110000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
...+....+..+|..++ +...+..++++..++++++.+.|+++ ++++..
T Consensus 255 ------~~~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~y 303 (418)
T PLN02242 255 ------MLLGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIY 303 (418)
T ss_pred ------hccCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEEC
Confidence 00111223444555444 45677788899999999999999998 477764
No 206
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=1.4e-16 Score=160.81 Aligned_cols=288 Identities=12% Similarity=0.026 Sum_probs=191.1
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+.+.+++++|.+.+ ..++|+|+++++...+.+..+ ++..|+++.+.|..+...+...|+
T Consensus 72 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~--- 130 (367)
T PRK02731 72 LKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA--- 130 (367)
T ss_pred HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC---
Confidence 33447777888654 357888888776554443321 456788888888888888888999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhcc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACI 291 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~ 291 (499)
+++.+|.+ ++.+|+++|++.++++ +.+|+++.++|+||.+-|.++|.++++.+ |+|+++|++|..+...
T Consensus 131 ~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~ 201 (367)
T PRK02731 131 KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR 201 (367)
T ss_pred eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC
Confidence 99999884 3689999999988643 33777889999999999999999999875 8999999999765431
Q ss_pred Cccch--hhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC
Q 010842 292 CPEFR--HYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF 368 (499)
Q Consensus 292 ~~~~~--~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 368 (499)
.+... ..... ..-..++.+..|.++.| ..+|+++.+++ .. +.+...... + . .
T Consensus 202 ~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~~-~~l~~~~~~----------------~--~----~ 256 (367)
T PRK02731 202 KDYEDGLELVAK-FPNVVVTRTFSKAYGLAGLRVGYGIAPPE-II-DALNRVRQP----------------F--N----V 256 (367)
T ss_pred cCcccHHHHHhh-cCCEEEEeeehHhhcCcccceeeeeCCHH-HH-HHHHHccCC----------------C--C----C
Confidence 11111 11111 11224555778987644 56789887542 22 222211000 0 0 1
Q ss_pred CcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 369 KSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 369 ~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
..+..+++...+. .+.+++..++..++.+.+.+.|++. ++.+. ++..+.+++++.+.. ...++.+.|.
T Consensus 257 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~---------~~~~~~~~L~ 325 (367)
T PRK02731 257 NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK---------DAAEAYQALL 325 (367)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC---------CHHHHHHHHH
Confidence 2345555555554 3446677777788888999999887 77665 556677777763211 1456777787
Q ss_pred hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
++|+.+.....+....++|+++. +.+++++++++|+++.+
T Consensus 326 ~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 326 KRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred HCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 88865444333332468999984 67899999999988753
No 207
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=2.8e-17 Score=167.98 Aligned_cols=239 Identities=16% Similarity=0.138 Sum_probs=162.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
.+|....+|++ ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|....
T Consensus 61 ~~p~~~~le~~----lA~l~g~~~a---------l~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~ 116 (427)
T PRK05994 61 TNPTNAVLEER----VAALEGGTAA---------LAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI 116 (427)
T ss_pred CCccHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence 34666777777 8899987653 8999999999988876532 5667888888887543
Q ss_pred ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+...|+ .++.++.+ |+++++++++++++ +|++..++|++|.+-|+++|+++|+++|++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~ 180 (427)
T PRK05994 117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPRTK------AIFIESIANPGGTVTDIAAIAEVAHRAGLP 180 (427)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 34566788 88888642 78999998876443 788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCCCCCCc--
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPSESNSV-- 354 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~-- 354 (499)
+++|++|+.+....| .. .++|.++.+.||+++.+.+ .|.+++.... .+.. .....++.......++.
T Consensus 181 livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~ 251 (427)
T PRK05994 181 LIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVL 251 (427)
T ss_pred EEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhH
Confidence 999999976532211 11 2499999999999997754 4545553221 1100 00011222110000000
Q ss_pred c-cCC----------CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 355 V-DFK----------DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 355 ~-~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
. ++. ...-..|.....+..|+.++. .+.+..++++..+++.++.+.|+++|.++-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~--l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 252 HETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTG--IETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred HHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcC--cccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 000 000112334456667766654 4889999999999999999999999987643
No 208
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=4.9e-17 Score=164.00 Aligned_cols=292 Identities=16% Similarity=0.154 Sum_probs=191.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+. .++++||++|+..++.+... ++..|+++...|.+..
T Consensus 50 ~~pt~~~L~~~----lA~l~g~~~---------~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 50 GNPTRDVVQRA----LAELEGGAG---------AVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_pred CCccHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 34566667766 888888532 48999999988877765432 5677888888887644
Q ss_pred HHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 203 KVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 203 ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
..+ .+.+.+.-.+..++ ..|+++++++++++++ +|++..++|++|.+-|+++|+++|+++|++++|
T Consensus 106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~tk------lV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv 172 (386)
T PRK08045 106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICHLAREAGAVSVV 172 (386)
T ss_pred HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCCe------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 333 23222111455542 3589999998865443 788899999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|++|+.+....| +.. .+|.++.+.|||++++.+ .|++..++++.. +.+.....++
T Consensus 173 Deay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~--------------- 229 (386)
T PRK08045 173 DNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNI--------------- 229 (386)
T ss_pred ECCCCccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhc---------------
Confidence 999977543211 111 489999999999998766 677766665432 2221111111
Q ss_pred cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------CceEEEE
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFALVCF 422 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~v~f 422 (499)
+-...++..|+.++.+ +.+..++++..+++..+.+.|+++|.++-+ .| | ..++++|
T Consensus 230 -----g~~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~ 302 (386)
T PRK08045 230 -----GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF 302 (386)
T ss_pred -----CCCCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEE
Confidence 1112456778777765 668999999999999999999999988644 22 1 1347888
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcC------C---EEEEee-----eE-------CC--EEEEEEeccCCCCcHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTG------R---VYLTHT-----IV-------GG--LYMLRFAVGASLTDERHV 479 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g------~---~~~~~~-----~~-------~g--~~~lRi~~~~~~~t~~di 479 (499)
.++.. .+...++.+.|.--. . .+..+. .. .| .+.+|+|++ -||+
T Consensus 303 ~~~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-----lE~~ 369 (386)
T PRK08045 303 ELDGD--------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-----IEDG 369 (386)
T ss_pred EecCc--------HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeC-----cCCH
Confidence 87531 122345555543111 0 000010 00 12 357999996 3567
Q ss_pred HHHHHHHHHHHHHHh
Q 010842 480 VAAWELIMEGADRLF 494 (499)
Q Consensus 480 ~~l~~~l~~~~~~l~ 494 (499)
+.+++.|.+..+...
T Consensus 370 ~dl~~dl~~al~~~~ 384 (386)
T PRK08045 370 EDLIADLENGFRAAN 384 (386)
T ss_pred HHHHHHHHHHHHHhh
Confidence 777777777766554
No 209
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=2.9e-17 Score=165.14 Aligned_cols=232 Identities=18% Similarity=0.217 Sum_probs=164.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
..|...+||+. ++++.|.+.. ++++||++|+..++ .... ++..|+++...+.+
T Consensus 50 ~~pt~~~le~~----la~l~g~~~~---------~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~ 104 (366)
T PRK08247 50 GNPTRGVLEQA----IADLEGGDQG---------FACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY 104 (366)
T ss_pred CCchHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence 34666777777 9999998764 88999998876543 2221 45677788777765
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+.+...|+ +++.++. .|+++|+++++++++ +|++..++|++|.+.++++|+++|+++|++
T Consensus 105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~tk------lv~le~P~NP~~~~~dl~~I~~la~~~g~~ 168 (366)
T PRK08247 105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNTK------AIFIETPTNPLMQETDIAAIAKIAKKHGLL 168 (366)
T ss_pred HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 3445566788 8888864 388999999876543 788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|.+|+......| .. .++|.++.+.+|+++++.+ .|++..+++... +.+.....+.
T Consensus 169 lIvD~t~~~~~~~~p----~~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~------------ 228 (366)
T PRK08247 169 LIVDNTFYTPVLQRP----LE---EGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAA------------ 228 (366)
T ss_pred EEEECCCccccccCc----hh---cCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhc------------
Confidence 999999965433222 11 2489999999999987654 566665544332 2211100010
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEec
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLN 425 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~ 425 (499)
+........|+.++.+ +.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus 229 --------g~~~s~~~a~l~~~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 --------GAVLSPFDSWLLIRGM--KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred --------CCCCChHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 1111234566666644 6777888899999999999999999987544 447788999774
No 210
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.79 E-value=1.2e-16 Score=168.30 Aligned_cols=230 Identities=17% Similarity=0.084 Sum_probs=161.5
Q ss_pred HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-HHHhCCCCCC
Q 010842 136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-CKLAGVSPAN 214 (499)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-~~~~G~g~~~ 214 (499)
+..+++||.+.++ ++++|+|.+|..++.++.. ++..|++.+++|.|+..+ +.+.|+ .
T Consensus 181 ~~AA~~fgAd~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa---~ 238 (720)
T PRK13578 181 KHAAKVFNADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA---T 238 (720)
T ss_pred HHHHHHhCCCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC---e
Confidence 5599999999987 8899999999988887653 678899999999999996 899999 9
Q ss_pred eEEeeCCCCCC---CccCHH-----HHHHHHHHH-H--HcCCcc-EEEEEecCCCcccccCChhHHHHH-HHHhCCEEEe
Q 010842 215 IRALPTSVDAN---FSLSPQ-----LLRRAVEAD-V--EAGLVP-LFLCATVGTTSTTAVDNVEPLAEV-ANEYGIWVHV 281 (499)
Q Consensus 215 v~~v~~~~~~~---~~~d~~-----~L~~~i~~~-~--~~g~~p-~~vv~t~gtt~~G~id~l~~I~~i-a~~~~~~lhv 281 (499)
+++++...+.. +.++++ .++++|++. . +...+| .++++|.+| ..|.+-++++|+++ |+.++ .+||
T Consensus 239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llv 316 (720)
T PRK13578 239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILF 316 (720)
T ss_pred EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEE
Confidence 99987654321 234654 489988765 1 122355 567777765 58999999999998 78888 9999
Q ss_pred eccccchhccCccchhh--hcCCCCCc----eeEecccccccCCCcceEEEEeCch-----------hHHHhh----cCC
Q 010842 282 DAAYAGSACICPEFRHY--LNGIERVD----SFSFSPHKWLLSYLDCCCLWVKQPG-----------LLVKAL----STD 340 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~--~~g~~~aD----si~~~~hK~l~~p~~~g~l~~r~~~-----------~l~~~~----~~~ 340 (499)
|.|||+...+.|.++.+ ...-.++| .++-|.||.|.+-..++++++++.. .+.+++ +.+
T Consensus 317 DEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTS 396 (720)
T PRK13578 317 DSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTS 396 (720)
T ss_pred eCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCC
Confidence 99999998777754332 11123588 9999999999888889999987632 222222 122
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV-KSDPRFEIVV 413 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~ 413 (499)
|.|+.- ..+-.+-+.+-.+.-++++++..+++..+++.| +..++|+++.
T Consensus 397 PsY~Lm------------------------ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~ 446 (720)
T PRK13578 397 PFYPLF------------------------AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFI 446 (720)
T ss_pred hHHHHH------------------------HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecc
Confidence 222110 111121222211122556777778888888888 7777888774
No 211
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=160.72 Aligned_cols=287 Identities=14% Similarity=0.080 Sum_probs=189.2
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++++++++|.+.+ ..++|+|+++++...+.+..+ ++..|++..++|..+...++..|+
T Consensus 76 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~--- 134 (371)
T PRK05166 76 LREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA--- 134 (371)
T ss_pred HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 44557888888654 468999999887666554421 566788889999999999999999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchhcc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSACI 291 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~~~ 291 (499)
+++.+|.+++ +.+|+++|++.++++++ +|+++.++|+||.+-+.+++.++++. +++++++|++|+.+..
T Consensus 135 ~~~~v~~~~~--~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~- 205 (371)
T PRK05166 135 RVERVTVTPD--LGFDLDALCAAVARAPR------MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA- 205 (371)
T ss_pred eEEEeecCCC--CCCCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-
Confidence 9999998753 58999999998866443 67789999999999888777777664 4799999999976652
Q ss_pred Cccchhh---hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 292 CPEFRHY---LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 292 ~~~~~~~---~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
....... ......--.+..+..|.++.| .-.|++++.++... +.+.....+. .
T Consensus 206 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~-~~~~~~~~~~-~--------------------- 262 (371)
T PRK05166 206 GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELV-GLLDRVRTPF-N--------------------- 262 (371)
T ss_pred CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHH-HHHHHhccCC-C---------------------
Confidence 1111111 111111125667889999844 66888777665433 2222111000 0
Q ss_pred CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
...+...+++..+ ..+.+++..+...+..+++.+.|++. ++++. ++..+.+.++... . ..++.+.|
T Consensus 263 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~-~----------~~~l~~~l 329 (371)
T PRK05166 263 VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR-P----------ASAVAEAL 329 (371)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC-C----------HHHHHHHH
Confidence 0122323333333 23456777777788888899999987 67653 5555555554321 1 35677788
Q ss_pred HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++|+.+..+.......++|++++ +.++.+++.++|+.+.
T Consensus 330 ~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 330 LRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred HHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 888865443322334578999996 5677888888887653
No 212
>PRK07908 hypothetical protein; Provisional
Probab=99.78 E-value=1e-16 Score=160.70 Aligned_cols=304 Identities=13% Similarity=0.071 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+|..+.+.+...++. ...|....+...+.+. +++.+|.+++ ..++|+|+++++..++. . .
T Consensus 36 ~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~a----ia~~~~~~~~-------~I~it~Ga~~al~~~~~-l-~------ 95 (349)
T PRK07908 36 PPEWLRERLAARLGD-LAAYPSTEDERRARAA----VAARHGRTPD-------EVLLLAGAAEGFALLAR-L-R------ 95 (349)
T ss_pred CCHHHHHHHHHHhhH-hhcCCCccchHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHh-c-C------
Confidence 444455555554432 1234333344555554 6666787654 46899999998876555 1 1
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++ .+++..+++......++..|+ +++.+|++++ |.+|+++++ +. +.+++++.++||||.
T Consensus 96 -----~~-~viv~~P~y~~~~~~~~~~G~---~i~~v~~~~~--~~~d~~~l~----~~------~~~i~l~np~NPTG~ 154 (349)
T PRK07908 96 -----PR-RAAVVHPSFTEPEAALRAAGI---PVHRVVLDPP--FRLDPAAVP----DD------ADLVVIGNPTNPTSV 154 (349)
T ss_pred -----CC-eEEEeCCCChHHHHHHHHcCC---EEEeeccCcc--cCcChhHhc----cC------CCEEEEcCCCCCCCC
Confidence 22 244456778778888899999 9999998753 689998653 22 236778999999999
Q ss_pred cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEe-ccccccc-CCCcceEEEEeCchhHHHhhcC
Q 010842 262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSF-SPHKWLL-SYLDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~-~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~ 339 (499)
+-+.++|.++|+ ++.++++|++|+.+. .. ....... ...-+++.+ +.+|.++ ....+|+++.+. +.+ +.+..
T Consensus 155 ~~~~~~l~~l~~-~~~~iIvDe~y~~~~-~~-~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~-~~~-~~~~~ 228 (349)
T PRK07908 155 LHPAEQLLALRR-PGRILVVDEAFADAV-PG-EPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAP-DVL-ARLTR 228 (349)
T ss_pred CcCHHHHHHHHh-cCCEEEEECcchhhc-cC-Ccccccc-ccCCCEEEEeecccccCCccceeeeeecCH-HHH-HHHHh
Confidence 999999999996 488999999997642 11 1111111 112345555 8899887 446689988643 333 22221
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
..... . ...+...+....+ +.+.+++..++..++++++.+.|++. ++++..++.
T Consensus 229 ~~~~~----------------~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~ 285 (349)
T PRK07908 229 GRAHW----------------P------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAA 285 (349)
T ss_pred cCCCC----------------C------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCC
Confidence 10000 0 0112222222211 23456677778888889999999987 788776566
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.+.+++++.+ ...+.+.+.++|+.+..+..+. +..++|+++. +++++++++++|+++..
T Consensus 286 g~~~~~~~~~------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 286 APFVLVRVPD------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAEILK 346 (349)
T ss_pred ceEEEEECCc------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHHHHh
Confidence 6666666542 2456667777786555444443 3578999994 67899999999988643
No 213
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.3e-17 Score=164.48 Aligned_cols=284 Identities=11% Similarity=0.063 Sum_probs=187.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~ 205 (499)
..++.++ +++.+|.+.+ ..++|+|+++++..++.+... ++ ..|+++.+++..+...+
T Consensus 62 ~~~Lr~a----ia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~ 119 (354)
T PRK04635 62 PPELINA----YSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISA 119 (354)
T ss_pred HHHHHHH----HHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHH
Confidence 4555555 7777898765 468999999988877765432 34 67888888998888999
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeecc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAA 284 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A 284 (499)
+..|+ +++.||++. +|.+|++.+++ + ++ +.+|+++.++||||.+-+.+++.++++.. ++++++|++
T Consensus 120 ~~~g~---~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDea 186 (354)
T PRK04635 120 ETFNV---GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEA 186 (354)
T ss_pred HHcCC---EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCc
Confidence 99999 999999874 36899998873 3 22 33788899999999999999999998873 799999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCccc
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQV 362 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 362 (499)
|..+... ............. .+..+.+|+++.| ..+|+++.+. +.+ +.+.. ...|
T Consensus 187 y~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~-~~l~~~~~~~------------------- 243 (354)
T PRK04635 187 YIEFCPE-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELI-EILMRVIAPY------------------- 243 (354)
T ss_pred hHhhccC-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHH-HHHHhhcCCC-------------------
Confidence 9765311 1111111111111 4567889998744 5578887643 322 22211 1111
Q ss_pred CCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 363 GTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 363 ~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
........+++..+ |.+.+++..++..+.++++.+.|++++++++. ++..+.+.+++.. .
T Consensus 244 ----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~------------~ 306 (354)
T PRK04635 244 ----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFDD------------V 306 (354)
T ss_pred ----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECCC------------H
Confidence 00122223333333 33445666677777888999999998777765 4555555555532 2
Q ss_pred HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.++.+.+.++|+.+..........++|++++ +.+|+++++++|++.
T Consensus 307 ~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~ 352 (354)
T PRK04635 307 DAVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence 3566667777864432222223468999984 689999999999764
No 214
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.78 E-value=5.3e-17 Score=164.06 Aligned_cols=304 Identities=14% Similarity=0.134 Sum_probs=186.7
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
+++.+++++.+|.+. .++++|||.|+..++.+..- .++..|+++..+|.++..++...|+
T Consensus 34 ~~~e~~la~~~g~~~---------~v~~~sgt~al~~~l~~~~~----------~~Gd~Viv~~~t~~~~~~~~~~~G~- 93 (375)
T PRK11706 34 RRCQQWLEQRFGSAK---------VLLTPSCTAALEMAALLLDI----------QPGDEVIMPSYTFVSTANAFVLRGA- 93 (375)
T ss_pred HHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHhCC----------CCCCEEEECCCCcHHHHHHHHHcCC-
Confidence 334445888888754 38999999998776654411 1567899999999999999999999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~ 291 (499)
+++.+++++++ +.+|+++|+++++++++ +|+.++ ++|...|+++|.++|+++|+++++|+||+.+...
T Consensus 94 --~~v~~d~d~~~-~~~d~~~le~~i~~~tk------~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~ 161 (375)
T PRK11706 94 --KIVFVDIRPDT-MNIDETLIEAAITPKTR------AIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTY 161 (375)
T ss_pred --EEEEEecCCCc-CCcCHHHHHHhcCCCCe------EEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECcccccccc
Confidence 99999998763 88999999999876433 555543 5899999999999999999999999999766422
Q ss_pred CccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHh--hcC---CccCCCCCCCCCCCcccCCCcccCC
Q 010842 292 CPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKA--LST---DPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
.. +. ...+ .|.-+++.| |.+.+ ...|++++.+++...+. +.. ......... ...+ .+ ...
T Consensus 162 ~~--~~-~g~~--~~~~~~Sf~~~K~l~~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~-~~-~~~ 228 (375)
T PRK11706 162 KG--RA-LGTI--GHIGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRGQ-----VDKY-TW-VDI 228 (375)
T ss_pred CC--ee-eecC--cCEEEEeCCCCccccc-cCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC-----CCcc-ee-eec
Confidence 11 11 1111 355555655 99865 34566667665433221 111 001000000 0000 00 111
Q ss_pred CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCC-----CceEEEEEecCCCCCCcchhH
Q 010842 365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPR-----HFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~ 436 (499)
+..+....+-+++-....+.+++..++..++++++.+.|.++++ +.+...+ ....+.+.+.+.
T Consensus 229 g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 299 (375)
T PRK11706 229 GSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL--------- 299 (375)
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc---------
Confidence 22222222222332222366888899999999999999988762 4432111 122333344321
Q ss_pred HHHHHHHHHHHhcCCEEEE---eee-------E---CC---------EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLT---HTI-------V---GG---------LYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~---~~~-------~---~g---------~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
....++.+.|.++|+.... +.. + .+ ...+-+- +++..+++|++.++++|+++.
T Consensus 300 ~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 300 EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHHHHHHHHHHHHh
Confidence 1245677778888863211 100 0 00 1223333 367889999999999998864
No 215
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=4.5e-17 Score=164.00 Aligned_cols=219 Identities=16% Similarity=0.177 Sum_probs=155.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+.. +++++|+.|+..++ .... ++..|+++...|.+..
T Consensus 48 ~~p~~~~Le~~----lA~l~g~~~~---------~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~ 102 (377)
T PRK07671 48 GNPTRAALEEL----IAVLEGGHAG---------FAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY 102 (377)
T ss_pred CChHHHHHHHH----HHHHhCCCce---------EEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence 45667777777 9999997654 78888887654433 2211 4667888888877433
Q ss_pred H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
. .+...|+ +++.++. .|+++++++|+++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~ 166 (377)
T PRK07671 103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL 166 (377)
T ss_pred HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3 3445677 7887763 388999999876554 788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+......+ .. .++|.++.+.+||+++|.+ .|+++++++....+.. ....++
T Consensus 167 lvvD~a~~~~~~~~p----~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~------------ 226 (377)
T PRK07671 167 TIVDNTFMTPYWQSP----IS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST------------ 226 (377)
T ss_pred EEEECCCCccccCCh----hh---hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh------------
Confidence 999999976433211 11 1489999999999998854 6777777654332221 111111
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
+-.......|..++. .+.+..++++..+++..+.+.|++.|++.-+
T Consensus 227 --------g~~~~~~~a~l~~~~--l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 227 --------GGILGPQDSWLLLRG--LKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred --------cCCCCHHHHHHHHcC--cChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 112234566766654 4667789999999999999999999987644
No 216
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.78 E-value=2.9e-17 Score=157.88 Aligned_cols=367 Identities=11% Similarity=0.069 Sum_probs=236.6
Q ss_pred HHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccc
Q 010842 71 TILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFM 149 (499)
Q Consensus 71 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~ 149 (499)
.+.-++.++...+... +| +|.-...-.+|..+.+.+...... ....|..+-+..++.+.+.+.+++++|.....
T Consensus 18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~- 92 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP- 92 (420)
T ss_pred cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence 4455554444433322 22 665555666778888877766543 34567778888999999999999988762110
Q ss_pred cCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC------CC
Q 010842 150 FSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS------VD 223 (499)
Q Consensus 150 ~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~------~~ 223 (499)
....++|.|+.+|++.+++...+ +++.|++-++.+.++.-...+.|. .++.||.. ..
T Consensus 93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS 155 (420)
T ss_pred ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence 02469999999999999888765 688899999999999999999999 99999887 33
Q ss_pred CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchh--h
Q 010842 224 ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--Y 298 (499)
Q Consensus 224 ~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~ 298 (499)
.+|.+|.+.||.++.+.++ +|+.+.|+||+|.+ ..|++|++||++||+|++.|.+|........++-. .
T Consensus 156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 4699999999999999887 89999999999999 55899999999999999999999776543321211 1
Q ss_pred hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC---cHHHH
Q 010842 299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK---SLRLW 374 (499)
Q Consensus 299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~---al~~~ 374 (499)
+.|+...-.-+.++.|.++.. .-.|+++. ++..+......+... ...++.++. +.++.
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~-----------------~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF-----------------VFTCPTPIQEASAAAFA 291 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc-----------------ccccCcHHHHHHHHHHh
Confidence 255544556677889988653 55788877 443332211111111 111222211 11111
Q ss_pred HHH--HHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCc-chhH--HHHHHHHHHHHh
Q 010842 375 MVL--RSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGS-ADTE--MLNRKLLDWVNS 448 (499)
Q Consensus 375 ~~l--~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~-~~~~--~~~~~l~~~l~~ 448 (499)
..+ ..-+ .....++.+...++++.+.+.|.++ |+.+..+.....+...+........ +.+. ...-++...+..
T Consensus 292 ~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~ 370 (420)
T KOG0257|consen 292 LELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIK 370 (420)
T ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhc
Confidence 112 1111 1334558888999999999999999 8988765554444444442110100 0010 011234444444
Q ss_pred c-CCEEEEeeeECCE-------EEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 449 T-GRVYLTHTIVGGL-------YMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 449 ~-g~~~~~~~~~~g~-------~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
. |.+++.++.+... ..+|++++ -+++-++..++.++
T Consensus 371 ~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~---k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 371 EGGVVVIPPSAFGSREHIKVAERLVRFCFC---KADETLRKAIERLK 414 (420)
T ss_pred cCcEEEeCchhcCCchhhHHHHHHHHHHHH---hhHHHHHHHHHHHh
Confidence 3 5556666555432 35666664 45556666666665
No 217
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.78 E-value=6e-17 Score=163.61 Aligned_cols=219 Identities=17% Similarity=0.264 Sum_probs=155.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
..|...++|+. +++++|.+.. ++++||++|+..++.+... ++..|+++...|.+
T Consensus 52 ~~p~~~~le~~----la~l~g~~~~---------~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~ 107 (380)
T TIGR01325 52 ANPTVAAFEER----IAALEGAERA---------VATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTV 107 (380)
T ss_pred CCchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHH
Confidence 34666777776 8889988543 8899999999888866532 45567777777754
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+.+...|+ +++.++.+ |++++++++++++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 108 ~~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~la~~~gi~ 171 (380)
T TIGR01325 108 GFISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAELAHAIGAL 171 (380)
T ss_pred HHHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3445677888 88888753 7888988876543 3788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+....| .-. ++|.++.+.+|+++++.. .|+++.++ +... .+.. +..
T Consensus 172 livD~a~~~~~~~~p----l~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~-~l~~---~~~----------- 228 (380)
T TIGR01325 172 LVVDNVFATPVLQQP----LKL---GADVVVYSATKHIDGQGRVMGGVIAGSE-ELMA-EVAV---YLR----------- 228 (380)
T ss_pred EEEECCCcccccCCc----hhh---CCCEEEeeccceecCCCCeEEEEEEeCH-HHHH-HHHH---HHH-----------
Confidence 999999976533211 111 489999999999987743 35555443 3222 1110 100
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
..+.......+|..++ |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus 229 ------~~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 276 (380)
T TIGR01325 229 ------HTGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV 276 (380)
T ss_pred ------hhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 0111223445566655 45778889999999999999999999987643
No 218
>PRK05939 hypothetical protein; Provisional
Probab=99.78 E-value=1.4e-17 Score=168.48 Aligned_cols=240 Identities=14% Similarity=0.098 Sum_probs=157.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST- 200 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s- 200 (499)
...|....+|++ ++++.|.+.. +++++|+.|+..++.+... ++..|+++...|.+
T Consensus 44 ~g~p~~~~lE~~----la~leg~~~~---------v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t 99 (397)
T PRK05939 44 QGTPTTAALEAK----ITKMEGGVGT---------VCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNT 99 (397)
T ss_pred CCCHHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccH
Confidence 356888889998 8889887664 7788888888777765422 56678888776643
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+.+...|+ +++.++. .|+++|+++++++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 100 ~~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~ 163 (397)
T PRK05939 100 NSLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNTR------MVFVETIANPGTQVADLAGIGALCRERGLL 163 (397)
T ss_pred HHHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCCe------EEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence 4456667788 8888875 278999999876543 788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+.+...-+ ... ++|.+..+.||+++++.+ .|.+++.+.. ...........|........ ....
T Consensus 164 livD~t~a~~~~~~~----~~~---gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (397)
T PRK05939 164 YVVDNTMTSPWLFRP----KDV---GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQW-GLTQ 235 (397)
T ss_pred EEEECCcccccccCc----ccc---CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhH-HHHH
Confidence 999999976532211 111 499999999999997644 2333332221 00000000001100000000 0000
Q ss_pred CCC-cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 357 FKD-WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 357 ~~~-~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
... .....+-...+...|+.++ |.+.+..++++..+++..+++.|+++|.++-
T Consensus 236 ~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~ 289 (397)
T PRK05939 236 IRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR 289 (397)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 000 0001222234455665554 5688999999999999999999999998753
No 219
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.78 E-value=9.9e-17 Score=161.71 Aligned_cols=223 Identities=19% Similarity=0.203 Sum_probs=157.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+ .+++++||++|+..++.+... ++..|+++...|.+..
T Consensus 49 ~~p~~~~le~~----lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~ 104 (382)
T TIGR02080 49 GNPTRDLLQQA----LAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY 104 (382)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 44666677776 88888843 258999999998877766532 5667888888887655
Q ss_pred HHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 203 KVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 203 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
..+. +.+.+.-.+..++ ..|+++++++++++++ +|+++.++|++|.+-|+++|+++|+++|+++++
T Consensus 105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~tk------lV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKPK------LVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 4332 2333111444443 2388999999876543 788899999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|++|+.+....| +.. ++|.++.+.+||++++.+ .|++.++++....+ +.....++
T Consensus 172 D~a~~~~~~~~p----l~~---gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l~~~~~~~--------------- 228 (382)
T TIGR02080 172 DNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-LAWWANNL--------------- 228 (382)
T ss_pred ECCCcccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-HHHHHHcc---------------
Confidence 999976533211 111 379999999999987766 77777776653322 11111111
Q ss_pred cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
|.....+..|+.++ |.+.+..++++..+++..+.++|+++|.++-+
T Consensus 229 -----g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V 274 (382)
T TIGR02080 229 -----GVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKI 274 (382)
T ss_pred -----CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 11234567777766 44788888999999999999999999988744
No 220
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=7.2e-16 Score=156.12 Aligned_cols=286 Identities=14% Similarity=0.063 Sum_probs=191.1
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++.+++++|.+.+ ..++|+|+++++..++.+..+ ++..|+++.+++..+...++..|+
T Consensus 91 lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~--- 149 (380)
T PLN03026 91 LRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA--- 149 (380)
T ss_pred HHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 44558888888654 458899999988776655422 466788888898888888899999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHH-HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVE-ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC 292 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~-~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~ 292 (499)
+++.+|.+. +|.+|+++|++++. +.+ .+|+++.++|+||.+-|.+++.++++.. +|+++|++|..+...
T Consensus 150 ~~~~v~~~~--~~~~d~~~l~~~~~~~~~------~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~- 219 (380)
T PLN03026 150 EVIKVPRTP--DFSLDVPRIVEAVETHKP------KLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ- 219 (380)
T ss_pred EEEEeecCC--CCCcCHHHHHHHHhccCC------cEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-
Confidence 999999864 47899999999883 333 3788889999999999999999999865 999999999765321
Q ss_pred ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842 293 PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL 371 (499)
Q Consensus 293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 371 (499)
.......... .-..+..+..|.++.| ...|+++... ..+.........| ....+
T Consensus 220 ~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~~-~~i~~l~~~~~~~-----------------------~~~~~ 274 (380)
T PLN03026 220 ESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-----------------------NVSVA 274 (380)
T ss_pred cchHHHHHhC-CCEEEEecchHhhcCccccceeeecCH-HHHHHHHHhcCCC-----------------------CCCHH
Confidence 1111111111 1235677889998744 5578777543 3222211111111 01223
Q ss_pred HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842 372 RLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG 450 (499)
Q Consensus 372 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g 450 (499)
...++...+. .+.+++..++..+.++++.+.|++++++++ .++..+.+.+++.+.. ...++.+.|.++|
T Consensus 275 ~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~---------~~~~~~~~l~~~g 344 (380)
T PLN03026 275 AEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR---------DAKKLKEDLAKMG 344 (380)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC---------CHHHHHHHHHHCC
Confidence 3344444442 244666777778888899999998865554 4556666777664310 1356777777788
Q ss_pred CEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 451 RVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 451 ~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.+.......+..++|++++ +.+++++++++|+++
T Consensus 345 I~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 345 VMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred eEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 65433322234568999996 678899999998764
No 221
>PLN02672 methionine S-methyltransferase
Probab=99.77 E-value=2.9e-16 Score=171.89 Aligned_cols=338 Identities=12% Similarity=0.134 Sum_probs=205.8
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+|..+.+.+...+..... ++....+.+++.+|+++.+|++.+. ....++++|+++++..++.+..+
T Consensus 711 pPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~------ 776 (1082)
T PLN02672 711 VPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ------ 776 (1082)
T ss_pred CCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC------
Confidence 344455555554432211 2223456789999999999996531 01346666665655555554432
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-Cccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-TSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G 260 (499)
++..|+++.++++.+..+++..|. +++.||++++++|.+|+++|++++++.+ .+ .|+.+.++ ||||
T Consensus 777 -----pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~----~~-~I~L~nPnhNPTG 843 (1082)
T PLN02672 777 -----EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVK----KP-WVYISGPTINPTG 843 (1082)
T ss_pred -----CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCC----CC-EEEEECcCCCCcC
Confidence 567888999999999999999999 9999999865569999999999985421 12 57788887 9999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeeccccchhccCcc-----chhhhcCCCC---C-ce-eEecccccccCC-CcceEEE
Q 010842 261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPE-----FRHYLNGIER---V-DS-FSFSPHKWLLSY-LDCCCLW 326 (499)
Q Consensus 261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-----~~~~~~g~~~---a-Ds-i~~~~hK~l~~p-~~~g~l~ 326 (499)
.+ +.+++|+++|++||+++++|.+|+...+..+. .......... . .+ +..+..|.++.| .-+|+++
T Consensus 844 ~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI 923 (1082)
T PLN02672 844 LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA 923 (1082)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE
Confidence 99 56788888999999999999999865442211 1111111111 1 12 344677655544 6689988
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------HHHHHHHHHHHHHHHHHHH
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------VLNLQSHIRSDIRLAKMFE 400 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------~~g~~~~~~~~~~~a~~l~ 400 (499)
..++... +.+.....+.... ....+.+...+..+. .+.+++..+...+.++++.
T Consensus 924 ap~~eLi-~~l~~~~~~s~~~-------------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 924 LNDSVLI-DAFHSAPGLSRPH-------------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred eCCHHHH-HHHHHhhhhcCCC-------------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHH
Confidence 7665332 2222111110000 001122222222221 1345566666778888999
Q ss_pred HHHhcCCCeEEEcCCCceEEEEEecCCCC-----CC-c---chhHHHHHHHHHHHHhcCCEEEEeeeE-CCEEEEEEecc
Q 010842 401 GFVKSDPRFEIVVPRHFALVCFRLNPYPH-----SG-S---ADTEMLNRKLLDWVNSTGRVYLTHTIV-GGLYMLRFAVG 470 (499)
Q Consensus 401 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-----~~-~---~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lRi~~~ 470 (499)
+.|++. ++++. +|..+.+.|...+.-. .+ . ........++.+.|.++..+.+.++.+ +..+++|++++
T Consensus 984 e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa 1061 (1082)
T PLN02672 984 ETLEAC-GWDVL-EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA 1061 (1082)
T ss_pred HHHHHC-CCeEe-cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec
Confidence 999887 78765 5655555543211000 00 0 000011356778887663344444444 34578999996
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~~~~~ 491 (499)
++++++++.++.|+++.+
T Consensus 1062 ---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1062 ---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ---CCHHHHHHHHHHHHHHHH
Confidence 578899999999988654
No 222
>PLN02271 serine hydroxymethyltransferase
Probab=99.77 E-value=6.8e-17 Score=163.92 Aligned_cols=328 Identities=11% Similarity=0.064 Sum_probs=204.4
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---C
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---T 197 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~ 197 (499)
|.......++|..+.+...++||.+...+ +--+-.-+||.||+.++.+... +++.|+..+. .
T Consensus 186 y~G~~~iD~iE~la~era~~lF~~~~~~~----gaNVQp~SGs~AN~aV~~ALl~-----------PGD~IL~ldl~~GG 250 (586)
T PLN02271 186 YTGNQYIDQIERLCCERALAAFGLDSEKW----GVNVQPYSCTSANFAVYTGLLL-----------PGDRIMGLDSPSGG 250 (586)
T ss_pred CCCChhHHHHHHHHHHHHHHHhCCccccc----ccceeeccHHHHHHHHHHHhcC-----------CCCEEEEecCCCCC
Confidence 34445677999999999999999876321 0115555899999988876632 6777776444 4
Q ss_pred chhHH------HHHHHhCCCCCCeEEee--CCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 198 HSTFA------KVCKLAGVSPANIRALP--TSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 198 H~s~~------ka~~~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
|.+.. +-+...|+ .+..+| ++++ ++.+|.++|++.... .+|.+|++.+..++ ..-|+++|+
T Consensus 251 Hlshg~~~~~g~~vs~sG~---~~~~vpY~~d~~-~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D~~~i~ 319 (586)
T PLN02271 251 HMSHGYYTPGGKKVSGASI---FFESLPYKVNPQ-TGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWDYARFR 319 (586)
T ss_pred chhcccccccccccccccc---eEEEEEcccccc-cCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCCHHHHH
Confidence 55543 23345566 566666 5433 368999999985433 23667777655554 668999999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 349 (499)
++|+++|++++||+||..+.+....+... +..+|++++++||||.+|.| |++++++... ... .+........
T Consensus 320 eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~--~g~~gs~s~~ 391 (586)
T PLN02271 320 QIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK--QGMLLSHGDD 391 (586)
T ss_pred HHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc--cCCccccccc
Confidence 99999999999999998887654433222 33599999999999999998 8888875421 000 0000000000
Q ss_pred ----CCCCcccCC-CcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEE
Q 010842 350 ----ESNSVVDFK-DWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCF 422 (499)
Q Consensus 350 ----~~~~~~~~~-~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f 422 (499)
+.....+.. -.+++.|..... ..+..+++......++++.++..++|+.|.+.|.+. |++++. ..+.+.+.+
T Consensus 392 ~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLv 470 (586)
T PLN02271 392 NSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLW 470 (586)
T ss_pred cccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeee
Confidence 000000000 013445544332 345556666555677999999999999999999887 999885 355666766
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-EC----CEEEEEEecc---CCCCcHHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VG----GLYMLRFAVG---ASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~----g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~ 491 (499)
.+.+.+ + ......+.|.+.|+.+-..+. .. ....+|+... .....++|++++.+.|.++++
T Consensus 471 Dl~~~g------~--~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 471 DLTTLG------L--TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred cCcccC------C--CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 665432 0 023333344444543211111 11 1245898762 233356888888887777665
No 223
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=9.1e-16 Score=155.20 Aligned_cols=318 Identities=13% Similarity=0.079 Sum_probs=198.2
Q ss_pred HHHHHHHHHcccC--CcccccChhhHHHHHHHHHHHHHHcC----CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 105 FLGEMLCACFNSV--GFNWLASPASTELEIVVMDWLATMLK----LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 105 ~~~~~l~~~~n~~--~~~~~~~p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
.+.+.+...++.+ ...|. .++..++.+++.+|+.+..| .+.+ ..++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~--- 113 (374)
T PRK02610 45 DLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCL--- 113 (374)
T ss_pred HHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcC---
Confidence 4445555444432 12343 35678888888888877653 3333 468899999987666554322
Q ss_pred hHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 179 DAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 179 ~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
++ ..|++..+++..+..+++..|+ +++.+|.+++ +|.+|+++|++++++.. ...+.+|+++.++|
T Consensus 114 --------~g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~N 179 (374)
T PRK02610 114 --------GGEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDPE-TFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNS 179 (374)
T ss_pred --------CCCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCcc-cCCCCHHHHHHHHHhhc--CCCceEEEEeCCCC
Confidence 23 3688899999999999999999 9999998754 48999999999986411 12244787888999
Q ss_pred cccccCChhHHHHHHH-HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 258 STTAVDNVEPLAEVAN-EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~-~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
|||.+-+.+++.++++ .+++|+++|.+|..+... +.. ..+..... -.+..+..|.++.| .-+|+++.. +... +
T Consensus 180 PTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~-~~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~~-~~l~-~ 254 (374)
T PRK02610 180 PTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLV-GELAQHPN-WVILRTFSKAFRLAAHRVGYAIGH-PELI-A 254 (374)
T ss_pred CCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chH-HHHhcCCC-EEEEEecchhccCcccceeeeecC-HHHH-H
Confidence 9999977666655543 148999999999765321 111 11111111 24567889999655 668888753 3332 3
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
.+.... +... ...+...++...++. +.+.+.+++..+.++.+.+.|++++++.+. +
T Consensus 255 ~l~~~~-~~~~---------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p 311 (374)
T PRK02610 255 VLEKVR-LPYN---------------------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-P 311 (374)
T ss_pred HHHHhc-CCCC---------------------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-C
Confidence 322211 0000 012333333344432 344444555555667788888888887754 4
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+..+.+.+++.... ....+.+.+.++|..+ .+ ...++|++++ +.+++++++++|+++.+.+
T Consensus 312 ~~g~f~~~~l~~~~---------~~~~~~~~l~~~gi~v-~~----~~~~lRls~~----~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 312 SAANFLYLRLSQDA---------ALAALHQALKAQGTLV-RH----TGGGLRITIG----TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CcceEEEEeCCCCC---------CHHHHHHHHHHCCEEE-Ee----CCCeEEEeCC----CHHHHHHHHHHHHHHHhhc
Confidence 55555555554310 1355677777788644 22 2357999986 3567899999998887654
No 224
>PRK09105 putative aminotransferase; Provisional
Probab=99.77 E-value=6e-16 Score=156.06 Aligned_cols=280 Identities=13% Similarity=0.073 Sum_probs=187.0
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++.+++.+|.+++ ..++|+|+++++..++.+..+ ++..|++++++|..+...++..|+
T Consensus 83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~--- 141 (370)
T PRK09105 83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA--- 141 (370)
T ss_pred HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence 33447778888665 468999999998877766532 466788899999999999999999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchhcc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSACI 291 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~~~ 291 (499)
+++.+|.++ +|.+|+++|++.. +. +.+|+.+.++||||.+-+.++|.++++. +++|+++|++|..+..
T Consensus 142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~- 211 (370)
T PRK09105 142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD- 211 (370)
T ss_pred eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-
Confidence 999999875 3689999998752 22 2367888999999999998888888764 4899999999965421
Q ss_pred CccchhhhcCCCCCceeEe-cccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842 292 CPEFRHYLNGIERVDSFSF-SPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK 369 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~-~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 369 (499)
.+....... ...+.+++ +..|.++.| ..+|+++... ..+ +.+... .+ . ...
T Consensus 212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~i-~~l~~~-~~----~------------------~~~ 264 (370)
T PRK09105 212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAARP-DLL-AKLARF-GH----N------------------PLP 264 (370)
T ss_pred CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecCH-HHH-HHHHhc-CC----C------------------CcC
Confidence 111111111 12455554 677888644 4588887643 322 222111 00 0 012
Q ss_pred cHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh
Q 010842 370 SLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS 448 (499)
Q Consensus 370 al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~ 448 (499)
.....++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.+.+++.. . ..++.+.|.+
T Consensus 265 ~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~-~----------~~~l~~~L~~ 331 (370)
T PRK09105 265 VPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKR-P----------AKAVADAMAK 331 (370)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCC-C----------HHHHHHHHHH
Confidence 233444444443 3456666778888889999999886 77755 4565655554431 1 3567778888
Q ss_pred cCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 449 TGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 449 ~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+|+.+ . ..+. ...++|++++ +++++++++++|+++.
T Consensus 332 ~gI~v-~-~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 332 QGVFI-G-RSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CCcEE-e-cCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 87654 2 2222 2468999985 5788999999998764
No 225
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1e-16 Score=162.43 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=164.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
.+|....||+. ++++.|.... +.++||+.|+.+++.+... ++..|+++...+.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~~a---------v~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGVGA---------VATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 46888889988 8888887653 8899999999988876532 5778999998887555
Q ss_pred HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. +..+|+ ++.++.. .+|+++++++|+++++ +|++..++|+++.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 54 667788 8888843 4799999999988765 677888999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHH-----HhhcCCccCCCCCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLV-----KALSTDPEYLKNKPSES 351 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~-----~~~~~~~~yl~~~~~~~ 351 (499)
+++|++|+...+.-| +-. +||.++.+..||++...+ .|++......... ......+.+........
T Consensus 180 livD~T~~tP~~~~p----l~~---GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~ 252 (432)
T PRK06702 180 FIVDNTLATPYLCQA----FEH---GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN 252 (432)
T ss_pred EEEECCCCchhhCCh----hhc---CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence 999999975432211 112 499999999999987644 3333322210000 00000000000000000
Q ss_pred CCccc-----CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 352 NSVVD-----FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 352 ~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+... ...+....+-...+...|+.++.+ +.+..++++..+++..+.+.|+++|.++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL--~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL--ETLHLRMERHSENALAVAKWLADHERIEWV 316 (432)
T ss_pred cchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 00000 000111223344567777777655 778999999999999999999999987644
No 226
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.76 E-value=2.6e-16 Score=156.34 Aligned_cols=273 Identities=16% Similarity=0.047 Sum_probs=176.7
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++++++++++|.+.+ ..++|+|+++++... ..+.. ++ .|+++.++|..+...+...|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~~-~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYLL-PRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHHH-HHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 3445558888887643 357888888776553 32221 34 477788899999999999999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccch
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
+++.++ |++.|++.+. .+ .+|+++.++|+||.+-+ +++|+++|+++|+++++|.+|+.+
T Consensus 109 --~~~~~~---------d~~~l~~~~~-~~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALE-EL------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhcc-cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 888876 6788888773 22 26788999999999987 677788899999999999999766
Q ss_pred hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.. .+....... ....+.++.+.+|+++.| ..+|+++.+++ .+.........+ .
T Consensus 171 ~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~-----------------------~ 224 (330)
T TIGR01140 171 TP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLARLREALGPW-----------------------T 224 (330)
T ss_pred CC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HHHHHHhcCCCC-----------------------C
Confidence 42 111111111 113457888999999855 55788887653 232221111100 0
Q ss_pred CCcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
...+...++.+.+... ..+...++..++.+++.+.|++++.+++. ++....+++.+.+ ..++.++|
T Consensus 225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~------------~~~l~~~l 291 (330)
T TIGR01140 225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD------------AAALHEAL 291 (330)
T ss_pred chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC------------HHHHHHHH
Confidence 1223344444444333 34566778888899999999998766654 3343444444322 34678888
Q ss_pred HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 447 ~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
.++|+.+..+..+. +..++|++++ +..++ ++++++|
T Consensus 292 ~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l 329 (330)
T TIGR01140 292 ARRGILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEAL 329 (330)
T ss_pred HHCCEEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhh
Confidence 88886655544443 3468999996 33355 8887766
No 227
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.76 E-value=1e-16 Score=160.65 Aligned_cols=232 Identities=14% Similarity=0.173 Sum_probs=162.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC---
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT--- 197 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~--- 197 (499)
....|...+||+. ++++.|.+.. +.+++|+.|+..++.+... ++..|+++...
T Consensus 60 r~~~P~~~~lE~~----la~leg~~~a---------v~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~ 115 (384)
T PRK06434 60 RWGNPTVQAFEEK----YAVLENAEHA---------LSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQ 115 (384)
T ss_pred CCCChhHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccch
Confidence 3467888999998 8888887654 8999999998888876421 56677777553
Q ss_pred -chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 198 -HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 198 -H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
+..+.+.+...|+ +++++++++.+.+.+++ ++ +.+|+...++|+++.+.|+++|+++|++++
T Consensus 116 t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~--------~~------tklv~~e~~snpt~~v~Di~~I~~la~~~~ 178 (384)
T PRK06434 116 TFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP--------SN------YDLIYAESITNPTLKVPDIKNVSSFCHEND 178 (384)
T ss_pred HHHHHHHHHHhcCc---EEEEECCCChhheeecC--------CC------eeEEEEEcCCCCCceeecHHHHHHHHHHcC
Confidence 2234466778899 99999987533333332 11 237888999999999999999999999998
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
++||++++.....- ++- .++|.+++|+||+++++.+ .|++.+++++...+..... .
T Consensus 179 --lvVD~t~~s~~~~~----pl~---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~-----~-------- 236 (384)
T PRK06434 179 --VIVDATFASPYNQN----PLD---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR-----K-------- 236 (384)
T ss_pred --eEEECCCCCcccCC----chh---cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH-----H--------
Confidence 56799996543211 111 1499999999999998765 6777776654322211100 0
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------CceEEEEE
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------HFALVCFR 423 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~v~f~ 423 (499)
..+.....+..|+.++. .+.+..++++..++++.+.+.|+++|.++-+.-| ..++++|.
T Consensus 237 --------~~G~~~~~~~A~l~~~g--L~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~ 306 (384)
T PRK06434 237 --------TLGSNPDPIQAYLALRG--LKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFE 306 (384)
T ss_pred --------hcCCCCCHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEE
Confidence 01222245666766654 4889999999999999999999999988543322 24578888
Q ss_pred ec
Q 010842 424 LN 425 (499)
Q Consensus 424 ~~ 425 (499)
+.
T Consensus 307 l~ 308 (384)
T PRK06434 307 LR 308 (384)
T ss_pred EC
Confidence 75
No 228
>PLN02368 alanine transaminase
Probab=99.76 E-value=6.2e-16 Score=156.98 Aligned_cols=280 Identities=12% Similarity=0.001 Sum_probs=186.8
Q ss_pred hHHHHHHHHHHHc--ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 102 TAGFLGEMLCACF--NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 102 ~~~~~~~~l~~~~--n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
++..+.+.+.... +.....|....+..++.+++.+|+.+..|++-+. ...++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP-----ELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcccHHHHHHHHHHHHcCC---
Confidence 4555555554421 2223457666677899999999999888864221 14689999999988777765311
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++..|+++.+++..+...++..|. +++.||++++.+|.+|+++|++.+++...++.++.+++.+.++|||
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 567788999999999999999999 9999999876568999999999997643333345678899999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cc---hhhhcCC----CC-Cc-eeEecccccc-cC-CCcceE
Q 010842 260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EF---RHYLNGI----ER-VD-SFSFSPHKWL-LS-YLDCCC 324 (499)
Q Consensus 260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~---~~~~~g~----~~-aD-si~~~~hK~l-~~-p~~~g~ 324 (499)
|.+ +.+++|+++|++||+|+++|.+|+.+.+... .+ ......+ +. .. .+..+..|.+ +. ..-+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 999 5567788889999999999999987654221 11 1111111 11 12 3445689997 44 466898
Q ss_pred EEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH------------HHHHHHHH
Q 010842 325 LWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV------------LNLQSHIR 390 (499)
Q Consensus 325 l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------------~g~~~~~~ 390 (499)
+++ .++..+ +.+.... .... ....+..+++...+.. +..+++.+
T Consensus 304 ~i~~~~~~~li-~~~~~~~-~~~~--------------------~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (407)
T PLN02368 304 FEMTNIPPKTV-EEIYKVA-SIAL--------------------SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE 361 (407)
T ss_pred EEEeCCCHHHH-HHHHHHh-cccC--------------------CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence 875 233333 2221111 0000 0123444555544421 11234567
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842 391 SDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF 422 (499)
Q Consensus 391 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 422 (499)
...+.++.+.+.|+++|++.+. .|+...+.|
T Consensus 362 ~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~ 392 (407)
T PLN02368 362 SLRRRARMMTDGFNSCKNVVCN-FTEGAMYSF 392 (407)
T ss_pred HHHHHHHHHHHHHhCCCCeEeC-CCCeeeEec
Confidence 7788889999999999998865 566666665
No 229
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.7e-15 Score=153.02 Aligned_cols=296 Identities=14% Similarity=0.057 Sum_probs=196.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.++...+.+++.+|+.+..|.+-+. ...++|+|+++++..++.+..+ ++..|++..+++..+..
T Consensus 64 ~~g~~~lr~aia~~~~~~~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~-----------~gd~v~v~~P~y~~~~~ 127 (368)
T PRK03317 64 DRDAVALRADLAAYLTAQTGVGLTV-----ENVWAANGSNEILQQLLQAFGG-----------PGRTALGFVPSYSMHPI 127 (368)
T ss_pred CCchHHHHHHHHHHhhhhccCCCCh-----hhEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHH
Confidence 3566789999899998887764221 2468899999988877776542 56678888999999999
Q ss_pred HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
+++..|. +++.+|.++ +|.+|+++|++++.+.. +.+|+.+.++||||.+-+.+++.++|+.+++++++|.
T Consensus 128 ~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE 197 (368)
T PRK03317 128 IARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDE 197 (368)
T ss_pred HHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeC
Confidence 9998888 888877653 47899999999986421 2257778999999999999999999999999999999
Q ss_pred cccchhccC-ccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842 284 AYAGSACIC-PEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 284 A~g~~~~~~-~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 359 (499)
+|+.+.... +........ .-+ .++.+..|.++.| ..+|+++... +.. +.+.. ...|
T Consensus 198 ~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~~~-~~~-~~l~~~~~~~---------------- 257 (368)
T PRK03317 198 AYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAAAP-AVV-DALRLVRLPY---------------- 257 (368)
T ss_pred CchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhCCH-HHH-HHHHhcCCCC----------------
Confidence 998753211 111111111 123 3455899999754 5568877643 322 33321 1011
Q ss_pred cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
....+...++...+. .+.+.+.+++..+..+++.+.|++. ++++. ++..+.+.|...+ .
T Consensus 258 -------~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-~---------- 317 (368)
T PRK03317 258 -------HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRFA-D---------- 317 (368)
T ss_pred -------CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEeccC-C----------
Confidence 011233333333332 2344555666677778888888886 77755 4555555442211 1
Q ss_pred HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...+.+.|.++|..+ .+. ....++|++++ +.++++.++++|+++.+.
T Consensus 318 ~~~~~~~l~~~Gv~v-~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 318 RHAVWQGLLDRGVLI-RDV--GIPGWLRVTIG----TPEENDAFLAALAEVLAT 364 (368)
T ss_pred HHHHHHHHHHCCEEE-EeC--CCCCeEEEecC----CHHHHHHHHHHHHHHHHH
Confidence 356777787888544 332 23468999984 678899999999887653
No 230
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.76 E-value=2.3e-15 Score=150.30 Aligned_cols=322 Identities=13% Similarity=0.115 Sum_probs=199.6
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT 197 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~ 197 (499)
..|..+|...+||++ +++++|++.. +.|++||.|...+. .+ ++ ++.+| +...
T Consensus 65 e~yag~~s~~~lE~~----va~~~G~~~a---------v~v~sGT~Al~ll~-~l-----------~l~pGDeV--psn~ 117 (450)
T TIGR02618 65 EAYAGSRNFYHLERT----VRELYGFKYV---------VPTHQGRGAENLLS-QI-----------AIKPGDYV--PGNM 117 (450)
T ss_pred hhhcCCCcHHHHHHH----HHHHHCCCeE---------EEcCCHHHHHHHHH-Hh-----------CCCCcCEE--CCce
Confidence 468999999999999 8889998864 99999999955432 22 11 34455 5678
Q ss_pred chhHHHH-HHHhCCCCCCeEEeeCCC--------CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-ccc---CC
Q 010842 198 HSTFAKV-CKLAGVSPANIRALPTSV--------DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAV---DN 264 (499)
Q Consensus 198 H~s~~ka-~~~~G~g~~~v~~v~~~~--------~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~i---d~ 264 (499)
|+...++ +...|. .++-++.++ ..++.+|+++|+++|++... ...| +|+++..+|.. |.. ++
T Consensus 118 ~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~-lV~~e~t~N~~GG~pvs~~~ 192 (450)
T TIGR02618 118 YFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIP-YICLAVTVNLAGGQPVSMAN 192 (450)
T ss_pred eHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccC-ceEEEEecccCCCeeCCHHH
Confidence 8777776 677787 666664431 12468999999999985321 1233 45555555544 677 67
Q ss_pred hhHHHHHHHHhCCEEEeeccccch-hccCc----cchh--h---hc-CCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGS-ACICP----EFRH--Y---LN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~-~~~~~----~~~~--~---~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+++|.++|++||+++|.|||+... +++.. .+.. . .. -...+|++++++||.+++|. .|++.+++++..
T Consensus 193 l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~ 271 (450)
T TIGR02618 193 MREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMF 271 (450)
T ss_pred HHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHH
Confidence 899999999999999999998652 33321 1111 0 01 13459999999999999996 577777888766
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+.-.....| .+ +..++.-.+|... ++..+|. +.+ +...++....+++|.+.|.+. |+.++
T Consensus 272 ~k~r~~~~~~-eG----------~~tyGgla~r~~~--ala~gL~----e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~ 333 (450)
T TIGR02618 272 QSAKELVVVF-EG----------MPSYGGLAGRDME--AMAIGIR----EAVDYEYIEHRVKQVRYLGDKLKAA-GVPIV 333 (450)
T ss_pred HHHHHHhhhc-CC----------ccccCchhhhhHH--HHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 5443333222 11 1111111122111 1122222 222 256677778899999999998 89888
Q ss_pred cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeE------C------CEEEEEEeccCCCCcHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIV------G------GLYMLRFAVGASLTDERH 478 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~------~------g~~~lRi~~~~~~~t~~d 478 (499)
.++..+.|.+.....-+.-.. ...-.+.+...|. +.|+=-+- ++.. . .-..+|+++---.-|.++
T Consensus 334 ~p~ggh~V~vda~~~lph~~~-~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h 412 (450)
T TIGR02618 334 EPVGGHAVFLDARRFLPHIPQ-DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAH 412 (450)
T ss_pred CCCCcceEEEEhHHhCCCCCh-hhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhH
Confidence 777777777654321000000 0112344554444 34431111 1111 0 125799998533448999
Q ss_pred HHHHHHHHHHHHHH
Q 010842 479 VVAAWELIMEGADR 492 (499)
Q Consensus 479 i~~l~~~l~~~~~~ 492 (499)
+|.+.++|..+.++
T Consensus 413 ~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 413 MDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 231
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.75 E-value=1.7e-15 Score=154.90 Aligned_cols=299 Identities=14% Similarity=0.120 Sum_probs=179.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC---CeEEEcCCCCchh
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH---KLVVYGSDQTHST 200 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~---~~~i~~s~~~H~s 200 (499)
.+...++|++ |++++|.+. .++++|||+|+..|+.++|...... .|.+ ..+|..+...|-+
T Consensus 82 ~~~~~~l~~~----l~~~~~~~~---------~~~~~SGs~A~e~al~~a~~~~~~~---~g~~~~~~~vi~~~~~~HG~ 145 (401)
T PRK00854 82 NDQLAPLYEE----LAALTGSHK---------VLPMNSGAEAVETAIKAVRKWGYEV---KGVPEGQAEIIVCADNFHGR 145 (401)
T ss_pred CHHHHHHHHH----HHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---cCCCCCCceEEEECCCcCCc
Confidence 3444555555 778887643 4999999999999999998642111 1211 2345555555766
Q ss_pred HHHHHHHhC-------CC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 201 FAKVCKLAG-------VS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 201 ~~ka~~~~G-------~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
..-+....+ .+ ..++..+| ..|+++|++.|.+.+ .+|++..+.+++|.+.| +++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~~------~aii~e~~~~~~G~~~~~~~~l~~ 212 (401)
T PRK00854 146 TLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITPNT------VAFLVEPIQGEAGVIIPPAGYFTR 212 (401)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCCCe------EEEEEccccCCCCCcCCCHHHHHH
Confidence 543332111 00 01233333 248899999886533 48889999999999976 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
|.++|++||+++++|++|.++.. .+. +.....++ ..|.++++ |++...+ ..|+++.+++ .+ +.+... .
T Consensus 213 l~~l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~~----~ 282 (401)
T PRK00854 213 VRELCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKPG----Q 282 (401)
T ss_pred HHHHHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccCC----C
Confidence 99999999999999999975422 221 11112233 26877774 9987653 4677777553 22 222110 0
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEe
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRL 424 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~ 424 (499)
.. . +. ++ ..+..++++..+..-.-....++..++++++.+.|++.....+. ..+...++.+.+
T Consensus 283 ~~----------~--t~-~~---~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~ 346 (401)
T PRK00854 283 HG----------S--TF-GG---NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVEL 346 (401)
T ss_pred CC----------C--CC-Cc---CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEE
Confidence 00 0 00 11 33444444444421111236677888889999999876321111 123344555555
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+.. ....++.+.|.++|+.+ .+ .+..++|+++ +..+|++||++++++|+++.
T Consensus 347 ~~~~--------~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 347 EPEA--------GGARQYCEALKERGLLA-KD---THDHTIRLAP-PLVITREQVDWALEQIAKVL 399 (401)
T ss_pred ecCc--------hhHHHHHHHHHHCCeEE-ec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence 3321 12456788888888543 22 2335799998 46789999999999998865
No 232
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=1.9e-16 Score=159.13 Aligned_cols=229 Identities=20% Similarity=0.132 Sum_probs=156.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|++ ++++. ... .+++++|+.|+..++.+... ++..|+++...|+...
T Consensus 49 ~~p~~~~Le~~----lA~l~--~~~--------~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAA----LGELE--GAE--------ALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHH----HHHHc--CCC--------EEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 45677788887 77776 222 48889999887776655421 5667888888887766
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+ ...|+ +++.|+.+++. . .+.+++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~~--~--------~~~~~t------~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGMA--E--------AALAGA------DLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCChH--H--------HhccCc------eEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 544 34688 89998875321 1 112222 3678889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+......| . . -.+|.++.+.|||+++|.+ .|+++.++++.. +.+.....+..
T Consensus 165 lvVD~t~~~~~~~~p----~-~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g----------- 225 (366)
T PRK07582 165 LVVDNTTATPLGQRP----L-E--LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAG----------- 225 (366)
T ss_pred EEEECCCCCccccCc----h-h--cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhC-----------
Confidence 999999864321111 1 1 1489999999999988766 577776665433 22211111111
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc------CC-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV------PR-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~------~~-----------~~~~ 419 (499)
-....+..|..++.+ +.+..++++..+++..+.+.|+++|.++-+. .| ..++
T Consensus 226 ---------~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~ 294 (366)
T PRK07582 226 ---------AIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL 294 (366)
T ss_pred ---------CCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence 011345667666655 5678889999999999999999999886543 12 3568
Q ss_pred EEEEec
Q 010842 420 VCFRLN 425 (499)
Q Consensus 420 v~f~~~ 425 (499)
++|.+.
T Consensus 295 ~s~~~~ 300 (366)
T PRK07582 295 VSFELA 300 (366)
T ss_pred EEEEeC
Confidence 888885
No 233
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.75 E-value=3.6e-15 Score=152.72 Aligned_cols=357 Identities=14% Similarity=0.037 Sum_probs=211.0
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccc--cccCCCCCChHHHHHHHHHHHccc-----CCcccccChhhHHHHHHHHHHHH
Q 010842 67 ESFETILKDVQEKIIPGITHWLSPNF--FAFFPATVSTAGFLGEMLCACFNS-----VGFNWLASPASTELEIVVMDWLA 139 (499)
Q Consensus 67 ~~~~~i~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~lE~~~~~~la 139 (499)
..+.++.+.+.+.-.+ +..+.. ++.-..+..++..+.+.+...+.. ....|...++...+.+++.+|+.
T Consensus 15 ~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~ 90 (409)
T PRK07590 15 YLFPEIARRVNAFREA----NPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDY 90 (409)
T ss_pred chHHHHHHHHHHHhhh----cCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHH
Confidence 3466666666554322 112222 222222222334455555554432 23456667788899999999988
Q ss_pred HHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC-----
Q 010842 140 TMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN----- 214 (499)
Q Consensus 140 ~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~----- 214 (499)
+..|++-+. ...++|+|+++++.. +....+ ++..|++..+++..+...++..|. .
T Consensus 91 ~~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~-----------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~ 150 (409)
T PRK07590 91 QARGCDISA-----DEIFISDGAKCDTGN-ILDIFG-----------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANE 150 (409)
T ss_pred HhcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC-----------CCCEEEEeCCCCcchHHHHHHcCC---cccccc
Confidence 777763221 146888888887654 322211 566788899999999999999998 6
Q ss_pred ------eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEEEeeccc
Q 010842 215 ------IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 215 ------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
++.||++.++++..|.+. . .+.+|+++.++||||.+- .+++|+++|++|++|+++|.+|
T Consensus 151 ~~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y 218 (409)
T PRK07590 151 DGRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY 218 (409)
T ss_pred cccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc
Confidence 888998755546655431 1 234677789999999994 4677888899999999999999
Q ss_pred cchhccCccchhhhcCCCCC---ceeEecccccccCC-CcceEEEEeCchhHHHhhcCC------ccCCCCCCCCCCCcc
Q 010842 286 AGSACICPEFRHYLNGIERV---DSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD------PEYLKNKPSESNSVV 355 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~a---Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~ 355 (499)
+.+....... ..+..+... -.+..++.|.++.| .-+|+++..+. .+ +.+... ..+.....
T Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~-li-~~~~~~~~~~~~~~~~~~~~------- 288 (409)
T PRK07590 219 EAFISDPSLP-HSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE-LK-GKTSDGEGVSLNSLWNRRQS------- 288 (409)
T ss_pred hhhccCCCCC-cchhhCCCcccceEEEecCccccCCcCceeEEEEcCHH-Hh-hhccccchhhhHHHHHHHHh-------
Confidence 8754311111 111122111 23456899999744 66888876442 22 111000 00000000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCc
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGS 432 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 432 (499)
... .....+...++...+ +...+++..++..+.++.+.+.|++. ++++..+...+.+++++.+.-
T Consensus 289 ----~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~---- 356 (409)
T PRK07590 289 ----TKF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM---- 356 (409)
T ss_pred ----hcc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC----
Confidence 000 001223334433333 34556667777778888899999887 677654434455666664321
Q ss_pred chhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 433 ADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+ ..++.+.+.+ .|.++..+..+. +..++|+++. .+++++++.++.|.++
T Consensus 357 ---~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 357 ---S--SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred ---C--HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHhh
Confidence 1 2456666664 465444443332 3468999964 4688999999888764
No 234
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.3e-15 Score=153.51 Aligned_cols=289 Identities=11% Similarity=0.034 Sum_probs=188.7
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
+++.+++++|.+.+ ..++|+|+++++..++.+... ++ ..|+++.+.+..+...++..|.
T Consensus 64 lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~-- 123 (364)
T PRK04781 64 LRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA-- 123 (364)
T ss_pred HHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC--
Confidence 34447777788654 468899999988777665422 33 5678888887778888899999
Q ss_pred CCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchh
Q 010842 213 ANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSA 289 (499)
Q Consensus 213 ~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~ 289 (499)
+++.||++. ++++.+|++++.+.+... .+.+|+++.++||||.+-+.+++.++++. +++|+++|++|+.+.
T Consensus 124 -~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~ 197 (364)
T PRK04781 124 -PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFS 197 (364)
T ss_pred -EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhc
Confidence 999999853 234788999986654321 13467778999999999998888888775 479999999998654
Q ss_pred ccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC
Q 010842 290 CICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF 368 (499)
Q Consensus 290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 368 (499)
. .+..........+ -.+..++.|.++.| .-.|+++... +.. +.+....... . .
T Consensus 198 ~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~~-~l~-~~l~~~~~~~-~---------------------~ 251 (364)
T PRK04781 198 D-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIANA-ELI-AVLRRCQAPY-P---------------------V 251 (364)
T ss_pred C-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeCCH-HHH-HHHHhccCCC-C---------------------C
Confidence 2 1111111111111 25667899998854 6688877543 332 3332211100 0 0
Q ss_pred CcHHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842 369 KSLRLWMVLRSY--G-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW 445 (499)
Q Consensus 369 ~al~~~~~l~~~--g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~ 445 (499)
..+...++...+ + .+.+.+.+++..+.++.+.+.|++++++..+.++..+.+.+++.. .+++.+.
T Consensus 252 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~------------~~~~~~~ 319 (364)
T PRK04781 252 PTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD------------AEAAFQA 319 (364)
T ss_pred CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC------------HHHHHHH
Confidence 123333333343 2 234556666777888899999998888753445666666666532 3456777
Q ss_pred HHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 446 VNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 446 l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+.++|+.+..+..+. ...++|++++ +.++.++++++|+++.
T Consensus 320 l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 320 LLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 888887655544332 2468999996 6789999999998764
No 235
>PRK03321 putative aminotransferase; Provisional
Probab=99.75 E-value=5.4e-16 Score=155.73 Aligned_cols=288 Identities=14% Similarity=0.066 Sum_probs=184.5
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++...++++ +++++|.+++ ..++++|+++++..++.+... ++..|+++..++..+...
T Consensus 57 ~g~~~lr~~----ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~ 114 (352)
T PRK03321 57 MGAVELRAA----LAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL 114 (352)
T ss_pred CcHHHHHHH----HHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence 455556655 7777777553 357787777766555443311 566788887777777778
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD 282 (499)
++..|. +++.+|.+++ +.+|++++++.+++++ .+|+.+.++|+||.+-|.++|.++|++ +++++++|
T Consensus 115 ~~~~g~---~~~~v~~~~~--~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D 183 (352)
T PRK03321 115 VQVAGA---TPVQVPLTPD--HTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD 183 (352)
T ss_pred HHHcCC---EEEEccCCCC--CCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 889999 9999998754 4899999999886533 367778999999999999999999987 59999999
Q ss_pred ccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 283 AAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
++|+.+.... .....+.... .-+ .++.+..|.++.| ..+|+++.+ +... +.+.... .
T Consensus 184 e~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~-~~~~~~~----~------------- 243 (352)
T PRK03321 184 EAYVEYVRDD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVI-AALRKVA----V------------- 243 (352)
T ss_pred chHHHhccCc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHH-HHHHHhc----C-------------
Confidence 9998664321 1111111111 123 3455788998754 457887764 3322 3322110 0
Q ss_pred cccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
......+...++...+ ..+.+.+.+++..+..+++.+.|++. ++.+. ++..+.+.++... .
T Consensus 244 -----~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~-~---------- 305 (352)
T PRK03321 244 -----PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE-R---------- 305 (352)
T ss_pred -----CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC-C----------
Confidence 0011234444333333 23445555666666677788888876 66643 3444555555422 1
Q ss_pred HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..++.+.|.+.|+.+ .+ + +..++|++++ +.++.++++++|+++.+
T Consensus 306 ~~~~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 306 TADFAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence 356777777788543 33 3 3345999984 78999999999988643
No 236
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=2.4e-15 Score=153.61 Aligned_cols=294 Identities=15% Similarity=0.125 Sum_probs=181.4
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++.+++++++|.+.. ...++++||++|+..++..++.. | ++.+|.+....|.+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~--------g-~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT--------G-RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH--------C-CCeEEEECCCcCCccHHHHhccCCc
Confidence 4566678998885421 13599999999999999988763 1 2334444445565655555444421
Q ss_pred C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842 212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW 278 (499)
Q Consensus 212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~ 278 (499)
. .++..+|. .|+++|++.+.+ .+.+|++....+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 02233332 378999988742 2446777777899999977 89999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+++|++|.++......+.....++ ..|.+++ .|+++..+..|.++.+++ +.+.+... ...
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~---~~~------------ 279 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG---LHG------------ 279 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC---CCc------------
Confidence 999999986432211111112233 3677766 599987677899888764 22333210 000
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCCcchhH
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
.+. .+.+........++..+.. ++..++..++.++|.+.|+++ ++.++. .....++.+.+...
T Consensus 280 -~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~--------- 344 (398)
T PRK03244 280 -STF-GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP--------- 344 (398)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc---------
Confidence 001 1111122223333333332 245677778888899999875 222221 12344555655321
Q ss_pred HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
...++.+++.++|..+ .+. +..++|+++. ...|++||++++++|.++..++.
T Consensus 345 -~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 -VAKAVEAAAREAGFLV-NAV---APDVIRLAPP-LIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred -HHHHHHHHHHHCCeEE-eec---CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhcc
Confidence 2467888888889654 331 2367999984 66899999999999999987654
No 237
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=4.3e-16 Score=156.95 Aligned_cols=288 Identities=19% Similarity=0.171 Sum_probs=182.4
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC----
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT---- 197 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~---- 197 (499)
...|...++|+. +++++|.+.+ +++++|++|+..++.+... ++..|+++...
T Consensus 42 ~~~p~~~~L~~~----lA~l~g~~~~---------v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t 97 (376)
T PRK06460 42 EANPTVLELTKK----IVELENAEMG---------VAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS 97 (376)
T ss_pred CCCccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence 455777777777 8899998654 6778888887776665422 45567776543
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
+..+.+.++..|+ +++.++.+. .+.+++.+++ .+.+|++..++|++|.+-|+++|+++|+++|+
T Consensus 98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~ 161 (376)
T PRK06460 98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS 161 (376)
T ss_pred HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3345577888898 888887542 2334443322 23488899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
+++||++|+.+... ..+. ..+|.++.+++|+++++.+ .|+++. +++.. +.+......+
T Consensus 162 ~vivDea~~~~~~~----~~l~---~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~-~~l~~~~~~~----------- 221 (376)
T PRK06460 162 ILIVDATFSTPINQ----KPLE---LGADIVVHSASKFLAGHNDVIAGLAAG-YGKLL-NVIDQMRRTL----------- 221 (376)
T ss_pred EEEEECCcCccccC----Chhh---cCCCEEEeecceeccCCCCceEEEEec-CHHHH-HHHHHHHHhc-----------
Confidence 99999999754211 1111 1379999999999875532 565554 44332 2221110000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------Cce
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFA 418 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~ 418 (499)
+-...+...|.+++ |.+.++.++++..++++++.+.|+++|.++-+. | | ..+
T Consensus 222 ---------g~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg 290 (376)
T PRK06460 222 ---------GTSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGG 290 (376)
T ss_pred ---------CCCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 00112344565554 558889999999999999999999998875432 2 1 246
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHh--c----C-C-EEE-Eeee-----E-------CC--EEEEEEeccCCCCc
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNS--T----G-R-VYL-THTI-----V-------GG--LYMLRFAVGASLTD 475 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~----g-~-~~~-~~~~-----~-------~g--~~~lRi~~~~~~~t 475 (499)
+++|.+.+. .....++.+.|.- . | . -.+ .+.. . .| .+.+|+|++
T Consensus 291 ~~s~~~~~~--------~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----- 357 (376)
T PRK06460 291 VLSFEVNGG--------QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVG----- 357 (376)
T ss_pred EEEEEEcCc--------HHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEec-----
Confidence 788887532 1223455555421 1 1 0 011 1100 0 01 357999996
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGADRL 493 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~l 493 (499)
-||.+.+++.|.++...+
T Consensus 358 lE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 358 IEDVNDLIEDLDRALSTL 375 (376)
T ss_pred cCCHHHHHHHHHHHHHhh
Confidence 357777888887776643
No 238
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.75 E-value=9.2e-16 Score=154.38 Aligned_cols=288 Identities=12% Similarity=0.109 Sum_probs=191.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++...+.++ +++.+|.+.+ ..++|+|+++++..++.+..+ ++..|+++.+++..+...
T Consensus 64 ~g~~~Lr~a----ia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~ 121 (366)
T PRK01533 64 GGATTLRQT----IANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHH 121 (366)
T ss_pred CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHH
Confidence 344455555 6666788765 468999999988777766532 566788899999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH---HHhCCEEEe
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA---NEYGIWVHV 281 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia---~~~~~~lhv 281 (499)
++..|+ +++.||.+. +.+|+++|+++++++++ +|+++.++||||.+-+.+++.+++ ++++ ++++
T Consensus 122 ~~~~g~---~v~~v~~~~---~~~d~~~l~~~~~~~~~------~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~ii 188 (366)
T PRK01533 122 AIIEGC---EVKEVALNN---GVYDLDEISSVVDNDTK------IVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVI 188 (366)
T ss_pred HHHcCC---EEEEeecCC---CCcCHHHHHHHhCcCCc------EEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEE
Confidence 999999 999999863 37999999998865433 677889999999997766665555 4555 6778
Q ss_pred eccccchhccCccchhhhcCCCC--CceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccC
Q 010842 282 DAAYAGSACICPEFRHYLNGIER--VDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~--aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~ 357 (499)
|.+|..+... ......+..+.. --.+..+..|.++.| .-+|+++.. +... +.+.. ...+
T Consensus 189 De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~-~~l~~~~~~~-------------- 251 (366)
T PRK01533 189 DEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELI-EKLNVVRLPF-------------- 251 (366)
T ss_pred EccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHH-HHHHHhcCCC--------------
Confidence 9999754321 111111111111 235667889999755 557777653 3322 22211 1000
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
....+...++...+. .+.+++..+...+.++++.+.++.. ++++. ++..+.+.+++.+
T Consensus 252 ---------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~~---------- 310 (366)
T PRK01533 252 ---------NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVEN---------- 310 (366)
T ss_pred ---------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCCC----------
Confidence 112455555555553 3445566666677777888888776 67755 5666777766531
Q ss_pred HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
..++.+.|.++|+.+.. + ..++|++++ +.++.++++++|+++.+...+.
T Consensus 311 --~~~~~~~l~~~GI~Vr~---~--~~~iRis~~----~~~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 311 --GGEIYEACAHAGFIIRP---F--PNGVRITVG----TREQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred --HHHHHHHHHHCCcEEcc---C--CCceEEeCC----CHHHHHHHHHHHHHHHHhcccc
Confidence 24577888888975543 2 256999996 7899999999999887655443
No 239
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.75 E-value=1.2e-15 Score=151.69 Aligned_cols=278 Identities=11% Similarity=0.035 Sum_probs=180.3
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++.+++.+|.+.. ..++|+|+++++..++.. .. ++. |++..+++..+...++..|+
T Consensus 45 lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~~-~~-----------~~~-vv~~~P~y~~y~~~~~~~G~--- 101 (332)
T PRK06425 45 IEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLSY-IN-----------VGN-IIIVEPNFNEYKGYAFTHGI--- 101 (332)
T ss_pred HHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHH-hC-----------CCc-EEEeCCChHHHHHHHHHcCC---
Confidence 33448888898765 468899999988776642 21 333 44457899999999999999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
+++.||++. +.+|.+.+++ . .+.+|+++.++||||.+-+ +++|+++|+++++|+++|.+|+.+..
T Consensus 102 ~v~~vp~~~---~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~ 169 (332)
T PRK06425 102 RISALPFNL---INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVP 169 (332)
T ss_pred eEEEEeCCc---ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccc
Confidence 999999874 3556655542 1 2336777899999999855 67778888999999999999987643
Q ss_pred cC-ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 291 IC-PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 291 ~~-~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.. +......... .--.+..+..|.++.| .-+|+++..+ +.. +.+.. ...+ .+
T Consensus 170 ~~~~~~~~~~~~~-~~vi~~~SfSK~~~l~GlRiGy~v~~~-~li-~~l~~~~~~~-----------------~~----- 224 (332)
T PRK06425 170 NRAEEDVLLNRSY-GNVIIGRSLTKILGIPSLRIGYIATDD-YNM-KISRKITEPW-----------------SV----- 224 (332)
T ss_pred ccchhHHHHhccC-CCEEEEeecHHhcCCchhhheeeecCH-HHH-HHHHHcCCCC-----------------cc-----
Confidence 11 1111111111 1124556789999855 5578887643 322 22221 1111 00
Q ss_pred CCcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
..... ..+.....+. +++..+...+.++++.+.|++. ++++..++..+.+++++. . ..++.+.+
T Consensus 225 -~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--~----------~~~~~~~l 289 (332)
T PRK06425 225 -CDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--D----------AHDFYSYL 289 (332)
T ss_pred -CHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--C----------HHHHHHHH
Confidence 11111 1122222222 3456777778888999999887 787765666666777653 2 35677788
Q ss_pred HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 447 ~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++|+.+..+..+. +..++|+++. +.++.++++++|+++.
T Consensus 290 ~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 290 LKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 88886655544442 2468999996 6789999999998753
No 240
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=2.2e-15 Score=152.14 Aligned_cols=296 Identities=11% Similarity=0.002 Sum_probs=192.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
...++++ +++.+|.+++ ..++|+|+++++..++.+..+ ++..|++..++|+.+...+.
T Consensus 69 ~~~Lr~~----ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~ 126 (369)
T PRK08153 69 NHDLRHA----LAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVA 126 (369)
T ss_pred cHHHHHH----HHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHH
Confidence 4456665 6666687654 458888888877666554422 56788899999999998889
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeecc
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAA 284 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A 284 (499)
..|. +++.+|.+.+ .+|++++++.+... .+.+|+.+.++||||.+-+.+++.++++.+ ++|+++|.+
T Consensus 127 ~~g~---~~~~vp~~~~---~~~~~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~ 195 (369)
T PRK08153 127 GFGG---RLVTVPYRDD---REDLDALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEA 195 (369)
T ss_pred HcCC---eEEEeeCCCC---CCCHHHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 9999 9999998643 58999887766422 123677788999999998888888777654 899999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
|+.+... ...... .....--.+..+..|.++.| .-+|+++... +.. +.+.....+.
T Consensus 196 y~~~~~~-~~~~~~-~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-~~~-~~l~~~~~~~------------------- 252 (369)
T PRK08153 196 YCETAPA-GAAPPI-DTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-GTI-KAFDKVRNHF------------------- 252 (369)
T ss_pred hhhhcCc-ccchhh-hhcCCCEEEEecchHhccCcchheeeeecCH-HHH-HHHHHhhcCC-------------------
Confidence 9765321 111111 11111235567789999755 4578887643 222 2222111110
Q ss_pred CCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
....+..+++...+. .+.+++..+...++++++.+.|++. ++... ++..+.+.+..... .....++
T Consensus 253 ---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~--------~~~a~~l 319 (369)
T PRK08153 253 ---GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD--------GAFARAV 319 (369)
T ss_pred ---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC--------cccHHHH
Confidence 012344444444443 3446666777778888888888876 66644 45555555544321 1235678
Q ss_pred HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.++|.++|+.+..+....+..++|+++. +++|++.++++|.++...+.+
T Consensus 320 ~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 320 LDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred HHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhhc
Confidence 8888888865423333234568999985 689999999999998765543
No 241
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.74 E-value=1.6e-15 Score=150.82 Aligned_cols=330 Identities=18% Similarity=0.120 Sum_probs=190.1
Q ss_pred CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCc
Q 010842 68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKT 147 (499)
Q Consensus 68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~ 147 (499)
..++.++.+++.+..+-.. .--.|+|.-.. +.......+.+..+ . +...+.+++.+.+++++|.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e 72 (346)
T TIGR03576 6 RREKALEIIREKISRGGRD-SLYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE 72 (346)
T ss_pred HHHHHHHHHHHHHhccCCc-cccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc
Confidence 3467788888877655321 12246665422 22222223333332 1 2347777777889999999654
Q ss_pred cccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc--C-CCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 148 FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG--S-DQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 148 ~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~--s-~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
..++++||++||..++.+..+ ++..|++ + ...|.++...+++.|. +++..
T Consensus 73 -------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------ 125 (346)
T TIGR03576 73 -------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------ 125 (346)
T ss_pred -------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc------
Confidence 359999999999988876643 4555654 2 5799999999999998 65322
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-ccchhhhc
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHYLN 300 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~~~ 300 (499)
.|+++|+. . + .+.+|+++ |++++|.+ +||++|+++|+++|+|++||.||+.+.... .. ....
T Consensus 126 ---~~l~~l~~-~-~------~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~- 191 (346)
T TIGR03576 126 ---DELSELKK-I-D------GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPAL- 191 (346)
T ss_pred ---CCHHHHhh-C-c------CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCC-CCHH-
Confidence 13444322 1 1 12345554 56889998 899999999999999999999998754321 11 0101
Q ss_pred CCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH
Q 010842 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS 379 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~ 379 (499)
.. .+|.++.+.+|++.++. .|+++.+. ... +.+ ....+|... .....+++++..
T Consensus 192 ~~-~~divv~s~SKalaG~r-~G~v~~~~-~li-~~l~~~~~~~~~s---------------------~~~~~~~aa~~a 246 (346)
T TIGR03576 192 DL-GADLVVTSTDKLMDGPR-GGLLAGRK-ELV-DKIKSVGEQFGLE---------------------AQAPLLAAVVRA 246 (346)
T ss_pred Hc-CCcEEEeccchhccccc-eEEEEeCH-HHH-HHHHHhhcCcccC---------------------ccHHHHHHHHHH
Confidence 11 26888999999774443 57766554 333 333 222222221 012233444444
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842 380 YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV 459 (499)
Q Consensus 380 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 459 (499)
+.....+.+.+...++++++.+.++. +.+. ++..+.+.+++.+.. ..+...+.|.++|+++.....+
T Consensus 247 L~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~~---------~~~~~~~ll~~~gV~v~~~~~f 313 (346)
T TIGR03576 247 LEEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEEK---------LIEIGLDLLRNYGIITITAVGM 313 (346)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCCC---------HHHHHHHHHHhCCEEEeCCccc
Confidence 42222234445555666666666663 3333 233344544553211 0123334455567655544333
Q ss_pred C-CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 460 G-GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 460 ~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
. ...++|++++.+.-++.+.+.++++|++.
T Consensus 314 ~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 314 PGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred CCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 2 25689999974332333799999999764
No 242
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=3.5e-16 Score=159.83 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=156.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
..|...++|++ +++++|.+. .+++++|++|+..++.+... ++..|+++...|..
T Consensus 55 ~~p~~~~le~~----lA~l~g~~~---------~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~ 110 (418)
T TIGR01326 55 MNPTTDVLEQR----IAALEGGVA---------ALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY 110 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 44666667766 999998754 39999999999888876532 45567777777643
Q ss_pred --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+.+...|+ +++.++.+ |+++|++++.++++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t~------~V~le~p~NPtg~v~dl~~I~~la~~~~i~ 174 (418)
T TIGR01326 111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENTK------AVFAETIGNPAINVPDIEAIAEVAHAHGVP 174 (418)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3455677888 88888742 78999998876443 778889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc-cc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV-VD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~-~~ 356 (499)
+++|++|+.+....+ .. ..+|.++.+.+|+++.+. ..|.++++..... ..... -..+.......... ..
T Consensus 175 livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~-~~~~~-~~~~~~~~~~q~a~~~~ 245 (418)
T TIGR01326 175 LIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFD-WANGR-FPLFTTPDPSYHGLVFT 245 (418)
T ss_pred EEEECCCchhhcCCc----hh---cCCeEEEECccccccCCccceEEEEEeccccc-ccccc-cccccCCCCccccchhh
Confidence 999999976532211 11 148999999999998753 2566666443211 00000 00000000000000 00
Q ss_pred C-----------C-CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 F-----------K-DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~-----------~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
. . .+.-..|-...+...|..++ |.+.+..++++..+++..+.+.|.+.|++..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 246 ETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 0 00001111223445565444 44778888888889999999999999998654
No 243
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.74 E-value=3.7e-15 Score=153.00 Aligned_cols=316 Identities=13% Similarity=0.096 Sum_probs=188.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
....+.++.+.+++++|.+.+ ..++++|||+|+..++.+++.... ++.+++.....|.+...++.
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~~--------~~~ii~~~~~yhg~~~~~~~ 141 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYTG--------RKKIISFEGAYHGRTLGALS 141 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHcC--------CCeEEEECCCcCCccHHHHH
Confidence 456677777779999985333 358999999999999999875320 23344444456766555544
Q ss_pred HhCCC---------CCCeEEeeCCCC----CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHH
Q 010842 207 LAGVS---------PANIRALPTSVD----ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLA 269 (499)
Q Consensus 207 ~~G~g---------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~ 269 (499)
..+-. ..+++.+|.+.. ..+..|+++|++.+++. +..+.+|+++...+++|.+.| +++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 218 (413)
T cd00610 142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR 218 (413)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 43220 114667776521 12455899999988652 223556777777777898877 99999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 349 (499)
++|++||+++++|++|+++............++ ..|.++++ |+++.++.+|+++.++ +.. +.+.. ..+...
T Consensus 219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~~-~~~-~~~~~-~~~~~~--- 289 (413)
T cd00610 219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGRE-EIM-DAFPA-GPGLHG--- 289 (413)
T ss_pred HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEcH-HHH-Hhhcc-CCCCCC---
Confidence 999999999999999986422111101111222 35776665 9998778889887653 322 33200 000000
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE--cCCCceEEEEEecC
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIV--VPRHFALVCFRLNP 426 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~--~~~~~~~v~f~~~~ 426 (499)
+...+.+.....+..+++.+.. .++.++..++.+++.+.|++... ..++ ..+...++++.+.+
T Consensus 290 -----------~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 290 -----------GTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred -----------CCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence 0001111122334444555433 34567777788888887776421 1111 13445667777654
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
... ...........+.+.|.++|..+ .+.. ...+|++++ ...|++||++++++|+++
T Consensus 356 ~~~-~~~~~~~~~~~~~~~l~~~gv~v-~~~~---~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 356 DRA-TKPPDKELAAKIIKAALERGLLL-RPSG---GNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred CCC-cCCcchHHHHHHHHHHHHCCeEE-eecC---CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 210 00000123567888888888544 3321 356999984 778999999999999875
No 244
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.74 E-value=1.6e-15 Score=162.72 Aligned_cols=362 Identities=10% Similarity=0.061 Sum_probs=235.2
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHH-H------HHHHHHcccCCccccc
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFL-G------EMLCACFNSVGFNWLA 123 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~------~~l~~~~n~~~~~~~~ 123 (499)
|.++|..-+.++| .+.++.++++++.++..+|.. ...|.|.-..+...|+++ . +|+++ |.+++...++
T Consensus 46 P~~ir~~~~l~lp-~~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTa-YTPYQpEisQ 120 (954)
T PRK12566 46 PPAIRLNRPLDLP-AALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTA-YTPYQPEIAQ 120 (954)
T ss_pred CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhc-CCCCCchhhh
Confidence 6677655456777 468999999999998777765 446777554455556655 3 33333 4566666677
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+.....+|.+. ++++|+|++-. +..+..++|.+- .|+.+++..... ++..+++++..|+....
T Consensus 121 G~Lqal~e~Qt--mi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~~~-------k~~~~~v~~~~hP~~~~ 183 (954)
T PRK12566 121 GRLEALLNFQQ--MTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVAKS-------KSNRFFVDEHCHPQTLS 183 (954)
T ss_pred HHHHHHHHHHH--HHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHhhc-------CCCEEEECCCCCHHHHH
Confidence 88888888884 59999999864 347777777432 344434322110 24468899999988666
Q ss_pred HHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 VCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.++ ..|+ +++. ++|++.+.++ .+.|+++.|++ .|.+.|+++|++++|+.|..+
T Consensus 184 v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 184 VLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPDT-HGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred HHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCCC-ceEEccHHHHHHHHHHcCCEE
Confidence 544 3455 5543 2333333222 45777888765 899999999999999999975
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCC-----CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-----LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-----~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+ +++--....+... .|--+||.++.+.+-+ ++| ...|++.++++ .....|+.+.+...+..+.
T Consensus 241 ~-~~~d~laL~ll~~-----Pge~GADI~vG~~Q~f-Gvp~~~GGP~ag~~a~~~~-----~~R~~PGRivG~s~D~~G~ 308 (954)
T PRK12566 241 C-VAADLLSLLVLTP-----PGELGADVVLGSTQRF-GVPMGYGGPHAAYFACRDD-----YKRAMPGRIIGVSRDARGN 308 (954)
T ss_pred E-EEeCHHHHhCCCC-----hhhcCCcEEeeCCCcC-CCCCCCCCCCeeeeeehHH-----HHhhCCCCccceeecCCCC
Confidence 5 4443222222111 1222499996666544 334 24788888873 2345677777766555444
Q ss_pred ccCCCcccC----CCCCCC-------cHHHH-----HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 355 VDFKDWQVG----TGRRFK-------SLRLW-----MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 355 ~~~~~~~~~----~sr~~~-------al~~~-----~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
..|. .++| .-||-. +-.++ +.+.++|.+|++++.++...++.+|++.|++ +|+++..++.+.
T Consensus 309 ~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~ 386 (954)
T PRK12566 309 TALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFFD 386 (954)
T ss_pred eeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCccc
Confidence 4432 1121 234432 12222 2344569999999999999999999999999 699998888888
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
.+.+++.. . ..++.++..+.|.-+-. +++ ..+.+++ ...+|.+||+.+++++.
T Consensus 387 ~~~v~~~~-~----------~~~~~~~a~~~~~n~r~---~~~-~~~~~s~-de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 387 TLTLEVGG-A----------QAAIIESAEAARINLRI---LGR-GRLGVSL-DETCDEATVARLFDIFL 439 (954)
T ss_pred eEEEEccC-C----------HHHHHHHHHHCCCeeEE---eCC-CeEEEEe-CCCCCHHHHHHHHHHhc
Confidence 88887721 1 44566776677753322 222 3488898 59999999999999984
No 245
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1e-15 Score=153.61 Aligned_cols=290 Identities=14% Similarity=0.144 Sum_probs=188.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++.+-|.+. .+++++|+.|+..++.+..+ ++..|+++...|.++.
T Consensus 62 gnPt~~~Le~~----la~le~~~~---------~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 62 GTPTTDALCKA----IDALEGSAG---------TILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR 117 (395)
T ss_pred CChHHHHHHHH----HHHHhCCCC---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence 34555566665 777766443 38888899888877765532 6778999999998866
Q ss_pred H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
. .++..|+ ++..++.+ +.+.++++++++++ +|+++.++|+++.+.||++|+++|+++|++
T Consensus 118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~ 181 (395)
T PRK05967 118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI 181 (395)
T ss_pred HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence 4 4567788 88888542 34778888876654 899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||++|+..... +++-. ++|.+..+..|++++..+ .|++. .+++...+.....
T Consensus 182 vvVD~t~a~p~~~----~pl~~---GaDivv~S~tKy~~Gh~d~~~G~v~-~~~~~~~~l~~~~---------------- 237 (395)
T PRK05967 182 VMMDNTWATPLYF----RPLDF---GVDISIHAATKYPSGHSDILLGTVS-ANEKCWPQLLEAH---------------- 237 (395)
T ss_pred EEEECCccCceec----ChhHc---CCCEEEEecccccCCCCCeeEEEEE-cCHHHHHHHHHHH----------------
Confidence 9999999765332 22222 499999999999765432 45444 3433221111000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~ 419 (499)
...|-...+...|..++ |.+.+.-++++..++|..+.+.|+++|.++ +..| | ..++
T Consensus 238 -----~~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 310 (395)
T PRK05967 238 -----GTLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGI 310 (395)
T ss_pred -----HHcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceE
Confidence 00122234556676655 558899999999999999999999999885 3322 1 1357
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----CE--EEEeee----------ECCEEEEEEeccCCCCcHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----RV--YLTHTI----------VGGLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~~--~~~~~~----------~~g~~~lRi~~~~~~~t~~di~~ 481 (499)
++|.+.... ....+...++.+.|.-- + .. .+.+.. ..+ ..+|+|++ -||.+.
T Consensus 311 ~sf~l~~~~----~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~-~liRlSvG-----lEd~~d 380 (395)
T PRK05967 311 FSFVLAAGP----EKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAG-PVIRLQIG-----LEDVPD 380 (395)
T ss_pred EEEEEcCCC----cccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCC-CeEEEEec-----cCCHHH
Confidence 888885320 00012234555554211 1 00 010000 111 47999996 346677
Q ss_pred HHHHHHHHHHHH
Q 010842 482 AWELIMEGADRL 493 (499)
Q Consensus 482 l~~~l~~~~~~l 493 (499)
+++.|.+..+.+
T Consensus 381 Li~Dl~~Al~~~ 392 (395)
T PRK05967 381 LKADLERGFAAA 392 (395)
T ss_pred HHHHHHHHHHhh
Confidence 777777666543
No 246
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=5.3e-17 Score=144.80 Aligned_cols=166 Identities=24% Similarity=0.199 Sum_probs=126.5
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH-HHHHHhCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA-KVCKLAGVS 211 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~-ka~~~~G~g 211 (499)
++.++++++++.+.. .+++++|||+|+..++.+++. ++..|+++...|++.. ..+...|+
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 456779999963332 368999999999998888753 3456888888998888 88888999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~ 291 (499)
+++.++.+.++....+.+.+++. .....|.+++++++++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEEL-----KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhc-----cccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 99999987654222333233332 12345778999999999999999999999999999999999999887654
Q ss_pred CccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842 292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK 328 (499)
Q Consensus 292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r 328 (499)
.+... .....+|+++.++|||++. .++|++++|
T Consensus 138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence 32211 1123599999999999998 699999875
No 247
>PLN02452 phosphoserine transaminase
Probab=99.73 E-value=1.9e-15 Score=150.43 Aligned_cols=339 Identities=12% Similarity=0.025 Sum_probs=212.2
Q ss_pred cccccCCCCCChH-HHHHHHHHHHcccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842 91 NFFAFFPATVSTA-GFLGEMLCACFNSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 163 (499)
|-+.|.|++...| .++..+....+|-+.. ..-.++...++-+++.+.|.++++.|+++ .-.++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence 4567788877655 4445555555442211 11236778888899999999999997653 1235668888
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCC--ccCHHHHHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANF--SLSPQLLRRAVEA 239 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~--~~d~~~L~~~i~~ 239 (499)
.+.-+++...... .+.+.++. ...++ +.+.++.+|. ..+...... +++ ..++++++.
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~-~~~~~~~~~~~~~~---- 142 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKD-EKYTKIPSVSEWEL---- 142 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCC-CCCCCCCChHHcCC----
Confidence 7665555543221 12233333 45555 6667777776 344332111 211 456666421
Q ss_pred HHHcCCccEEEEEecCCCcccc-cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842 240 DVEAGLVPLFLCATVGTTSTTA-VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS 318 (499)
Q Consensus 240 ~~~~g~~p~~vv~t~gtt~~G~-id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 318 (499)
+ ..+.+|..++..|.+|. +.|++++.+ +.++||++...+....+- +..+.+..++||.++
T Consensus 143 ~----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv--------~~~~v~~~saqK~lG- 203 (365)
T PLN02452 143 T----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDV--------SKYGVIYAGAQKNVG- 203 (365)
T ss_pred C----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCH--------HHcCEEEEecccccC-
Confidence 1 12458999999999999 599988863 799999987665443321 123445579999986
Q ss_pred CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHH
Q 010842 319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLA 396 (499)
Q Consensus 319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a 396 (499)
|.|.|++++|++.. .+.-...+.|+..... ....+...+.+. ....+..+++.+-.+ |++.+.++..+++
T Consensus 204 P~Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~-------~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 204 PSGVTIVIIRKDLI-GNARPITPGMLDYKIH-------AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred CCCeEEEEEcHHHH-hhcccCCCchhhHHHH-------HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 88999999987643 2221222333221100 000001111111 123455567766555 8999999999999
Q ss_pred HHHHHHHhcCCCeEEE-cC---CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCC
Q 010842 397 KMFEGFVKSDPRFEIV-VP---RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGAS 472 (499)
Q Consensus 397 ~~l~~~L~~~~~~~~~-~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~ 472 (499)
+++++.|++.+|+... .+ ....+++|++... .+.+++.+.+.++|.+.+.+...-|. +|+++. .
T Consensus 276 ~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~---------~~~~~f~~~~~~~g~~~~~G~r~~gg--~R~s~y-n 343 (365)
T PLN02452 276 DLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS---------ELEAEFVKEAAKAGMVQLKGHRSVGG--MRASIY-N 343 (365)
T ss_pred HHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc---------hhHHHHHHHHHHCCCcccCCccccCc--eEEECc-C
Confidence 9999999998887221 11 1234788887552 25788999999999766555433332 999996 6
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 010842 473 LTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 473 ~~t~~di~~l~~~l~~~~~~ 492 (499)
.++.++++.|++.++++.++
T Consensus 344 a~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 344 AMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 78999999999999998764
No 248
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.73 E-value=3.7e-15 Score=152.29 Aligned_cols=323 Identities=12% Similarity=0.037 Sum_probs=200.2
Q ss_pred HHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEE--EcCChHHHHHHHHHHHHHHHHh
Q 010842 105 FLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGV--IQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 105 ~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~--~t~ggt~A~~~al~~ar~~~~~ 179 (499)
.+.+.+..... .....|....+..++.+++.+|+.+..+. +++ ..+ .|.||+.|...++.+.+.- .
T Consensus 51 ~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~v~~~~t~G~~~al~~~~~~l~~~-~- 121 (404)
T PTZ00376 51 SVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK-------RIATVQALSGTGALRLGFEFLKRF-L- 121 (404)
T ss_pred HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC-------eEEEeeccCcchHHHHHHHHHHHh-c-
Confidence 34444433332 22356777778899999999888655432 222 233 3889888877666543211 1
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
.++..|++.++++..+...++.+|+ +++.||+.+++++.+|++.+++++.+.. ....+++.+.++|||
T Consensus 122 ------~~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPT 189 (404)
T PTZ00376 122 ------PAGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPT 189 (404)
T ss_pred ------CCCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 1577899999999999999999999 9999998543357999999999986431 112467778999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchhh--hcCCCCCceeEecccccccCC-CcceEEE--EeC
Q 010842 260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLW--VKQ 329 (499)
Q Consensus 260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~--~r~ 329 (499)
|.+ +.+++|+++|++|++|+++|.+|..+..... ..... +.....--.++.+..|.++.| .-+|+++ +.+
T Consensus 190 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~ 269 (404)
T PTZ00376 190 GVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCAN 269 (404)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCC
Confidence 999 5578888999999999999999987644210 11111 111111124567789999854 6688875 345
Q ss_pred chhHH---HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 010842 330 PGLLV---KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKM 398 (499)
Q Consensus 330 ~~~l~---~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~ 398 (499)
++... ..+.....+... + ...+..+++...+.. +.+++..++..+.++.
T Consensus 270 ~~~~~~l~~~~~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 270 KEEAANVLSQLKLIIRPMYS-----------------S---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred HHHHHHHHHHHHHHHhhhcC-----------------C---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43221 111110000000 0 012334444444421 1234445566778888
Q ss_pred HHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842 399 FEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475 (499)
Q Consensus 399 l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t 475 (499)
+.+.|++.. +++.. +|..+.+.|- .. ..+++++|.++..+++.+. + |+++++ .+
T Consensus 330 l~~~L~~~~~~~~~~~~-~p~gg~f~~~--~~-----------~~~~~~~L~~~~~v~v~p~---~----Ris~~~--~~ 386 (404)
T PTZ00376 330 LYDELKALGSPGDWEHI-INQIGMFSFT--GL-----------TKEQVERLIEKYHIYLLDN---G----RISVAG--LT 386 (404)
T ss_pred HHHHHHhcCCCCccccc-ccCceEEEec--CC-----------CHHHHHHHHHhCCEeecCC---C----eEEEec--cC
Confidence 888888762 24333 3444444332 11 1345666776644454443 2 999952 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGAD 491 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~ 491 (499)
.++++.++++|+++..
T Consensus 387 ~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 387 SKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHhHHHHHHHHHHHHh
Confidence 8999999999998764
No 249
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.73 E-value=4.7e-16 Score=154.82 Aligned_cols=340 Identities=13% Similarity=0.012 Sum_probs=209.0
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+|.+..+.+.+.+- ...-.+|...++-+++.+.|.++++.+.++ .-.++++|||.+.-.++......
T Consensus 15 ~~~~~~~~~~~~~~---~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~----- 81 (374)
T TIGR01365 15 RPGWSIEELKNAPL---GRSHRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC----- 81 (374)
T ss_pred CchhhHHHHhhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC-----
Confidence 45554444443321 112347888999999999999999986442 12367999998766665544311
Q ss_pred hhhccCCeEEEcCCCCchh--HH-HHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 182 GAENMHKLVVYGSDQTHST--FA-KVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s--~~-ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
++..+++. ..++ +. +.++.+|+ + +..+..+... .+|+++++. . + .|++++..|
T Consensus 82 -----~g~~vLv~--g~FG~r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~----~-~------~v~~vhnET 138 (374)
T TIGR01365 82 -----RGVDVLAW--ESFGKGWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF----K-N------DVVFTWNGT 138 (374)
T ss_pred -----CCCeEEEE--CHHHHHHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC----C-C------CEEEecCCC
Confidence 33344443 2444 34 88888999 5 6777665543 789999973 1 1 267999999
Q ss_pred cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~ 337 (499)
+||...|+++|+..+ ++..++||+.-+.+....+ +.++|.+..+++|.++.|.|.+++.++++..- +.-
T Consensus 139 STGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~--------~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~-~~~ 207 (374)
T TIGR01365 139 TSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLD--------YHKLDVVTFSWQKVLGGEGAHGMLILSPRAVA-RLE 207 (374)
T ss_pred chheecccccccccc--CCCcEEEEccchhcCCCCC--------hhHCcEEEEechhccCCCCceEEEEECHHHHH-HHh
Confidence 999999998776432 5899999986544433221 11399999999999999999999999987642 221
Q ss_pred cCCccCCCCCC-CCCCCcccCCCcccCCCCCCC--cHHHHHHHHH---hcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 338 STDPEYLKNKP-SESNSVVDFKDWQVGTGRRFK--SLRLWMVLRS---YGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 338 ~~~~~yl~~~~-~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~---~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
... .|..... -+......+....-....++. ...+++.+.. +..+ |++++.+|+.++++.+++.+++.+.++
T Consensus 208 ~~~-~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~ 286 (374)
T TIGR01365 208 SYT-PAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIH 286 (374)
T ss_pred hcC-CCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 111 1221100 000000000000000112222 1233433333 3354 899999999999999999999984477
Q ss_pred EEcC-C---CceEEEEEecCCCC--CCcchhHHHHHHHHHHHHhcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842 411 IVVP-R---HFALVCFRLNPYPH--SGSADTEMLNRKLLDWVNSTGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 411 ~~~~-~---~~~~v~f~~~~~~~--~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
++.. + ...++++++.+.+. .++.....+..++.+.|.++|..+-. .....+ ..|||..+ ...+.+||+.++
T Consensus 287 ~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~-~~fRIg~~-G~i~~~di~~l~ 364 (374)
T TIGR01365 287 FLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAP-SGLRIWCG-ATVEKSDLECLC 364 (374)
T ss_pred cCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCC-CceEEecC-CcCCHHHHHHHH
Confidence 7752 1 23345566633210 00001122346788888888854332 222333 56999998 789999999999
Q ss_pred HHHHHHHH
Q 010842 484 ELIMEGAD 491 (499)
Q Consensus 484 ~~l~~~~~ 491 (499)
+.|.=+..
T Consensus 365 ~~l~~~~~ 372 (374)
T TIGR01365 365 PWLDWAFA 372 (374)
T ss_pred HHHHHHHh
Confidence 99876544
No 250
>PRK05839 hypothetical protein; Provisional
Probab=99.73 E-value=4.2e-15 Score=150.34 Aligned_cols=317 Identities=11% Similarity=0.037 Sum_probs=191.4
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+....+. ...|....+..++.+++.+|+.+..|.+-+. ...++|+|+++|+...+.+....
T Consensus 40 ~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~~~~~------- 106 (374)
T PRK05839 40 KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE-----NELIPTFGTREVLFNFPQFVLFD------- 106 (374)
T ss_pred HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHHhcC-------
Confidence 4445555543332 3345555566789999999999988853211 14688999888876655543210
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
.++..|+++.+++..+...++..|+ +++.||.++++.|.+|+++.+ + +. +.+|+++.++||||.+
T Consensus 107 --~~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~-~~------~k~v~i~nP~NPTG~~~ 172 (374)
T PRK05839 107 --KQNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--L-QE------VDLVILNSPNNPTGRTL 172 (374)
T ss_pred --CCCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--h-cc------ccEEEEeCCCCCcCccc
Confidence 0456788899999999999999999 999999986555777766542 2 12 3367778999999999
Q ss_pred --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-----CCCC--CceeEecccccccC-CCcceEEEEeCchh
Q 010842 263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----GIER--VDSFSFSPHKWLLS-YLDCCCLWVKQPGL 332 (499)
Q Consensus 263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g~~~--aDsi~~~~hK~l~~-p~~~g~l~~r~~~~ 332 (499)
+.+++|+++|+++|+|+++|.+|+.+.. .+....... +... --.++.+..|.++. ..-+|+++.. +..
T Consensus 173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~~ 250 (374)
T PRK05839 173 SLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-ASI 250 (374)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HHH
Confidence 4567888889999999999999987532 111111111 0001 12556788997644 4668888764 332
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
. +.+.....++... . ..+...++...+ ..+.+++..++..++.+.+.+.| ++.
T Consensus 251 ~-~~~~~~~~~~~~~-----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~- 304 (374)
T PRK05839 251 L-KKYKAYRTYLGCA-----------------S---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT- 304 (374)
T ss_pred H-HHHHHHHhhcCCC-----------------C---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC-
Confidence 2 2221111111100 0 112222222222 23445555666666666666554 222
Q ss_pred EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
.++....+.+++.+ ..++.+++.+ .|..+..+..+. +..++|++++ .+.++++..++.|
T Consensus 305 -~p~gg~fi~~~~~~------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~l~~l 368 (374)
T PRK05839 305 -IPPATFYVWLPVDN------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV---YDTPKLEKALEII 368 (374)
T ss_pred -CCCeeEEEEEeCCC------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec---CCHHHHHHHHHHH
Confidence 23344445555532 2456667764 675554433332 2478999995 3688999999999
Q ss_pred HHHHH
Q 010842 487 MEGAD 491 (499)
Q Consensus 487 ~~~~~ 491 (499)
.++.+
T Consensus 369 ~~~l~ 373 (374)
T PRK05839 369 KTYLE 373 (374)
T ss_pred HHHhh
Confidence 88753
No 251
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.73 E-value=2.3e-15 Score=155.50 Aligned_cols=361 Identities=11% Similarity=0.098 Sum_probs=206.1
Q ss_pred ChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHH-HHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842 101 STAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLA-TMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177 (499)
Q Consensus 101 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la-~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~ 177 (499)
.+|..+-++...... ..|...++..++.+++.+++. +.++. +.. +....++|+|+++|+..++.+.....
T Consensus 113 ~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~~~ 185 (527)
T PRK09275 113 DADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKENG 185 (527)
T ss_pred CCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhhhh
Confidence 346666665555433 248888888888888887554 43332 111 00146899999999888877532111
Q ss_pred HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
.- .++..|+++.+.+..+...+++.|.|. .++.++.+++++|++|+++|++++++.++ +|+++.|+|
T Consensus 186 ll------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~nP~N 252 (527)
T PRK09275 186 LL------KAGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVNPSN 252 (527)
T ss_pred cC------CCCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeCCcC
Confidence 11 167789999999999999999987722 44555555555699999999998765443 788889999
Q ss_pred cccccCC---hhHHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCch
Q 010842 258 STTAVDN---VEPLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPG 331 (499)
Q Consensus 258 ~~G~id~---l~~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~ 331 (499)
|||.+-+ +++|+++|++ +++|+++|.+|+.+.. .+.........--.++.+..|.++.| .-.|++...+..
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~ 329 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDN 329 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchh
Confidence 9999955 7888889965 4999999999987542 22222221222235566789998755 557888776542
Q ss_pred hHHHhhcCC---------ccC--CCCCCCCCCCcccCCCcc--------cCCCCCCCcHHHHH-----HHHHh--cHHHH
Q 010842 332 LLVKALSTD---------PEY--LKNKPSESNSVVDFKDWQ--------VGTGRRFKSLRLWM-----VLRSY--GVLNL 385 (499)
Q Consensus 332 ~l~~~~~~~---------~~y--l~~~~~~~~~~~~~~~~~--------~~~sr~~~al~~~~-----~l~~~--g~~g~ 385 (499)
.+.+....- ..| +.... ....+.+.- ...+-.......++ ....+ +.+..
T Consensus 330 v~~~~i~~l~~~~~~~~~~ry~~~~~~p----~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~ 405 (527)
T PRK09275 330 VFDKLIAKLPEEKKKELDKRYSSLTTDP----EKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYK 405 (527)
T ss_pred HHHHHHHhccHHHHHHHHhhhhhccCCc----chhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHH
Confidence 221111000 000 10000 000011000 00010111111221 22222 23445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEE-EecCCCC--CCcchh-----HHHHHHHHHHHHhc-CCEEEE
Q 010842 386 QSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCF-RLNPYPH--SGSADT-----EMLNRKLLDWVNST-GRVYLT 455 (499)
Q Consensus 386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f-~~~~~~~--~~~~~~-----~~~~~~l~~~l~~~-g~~~~~ 455 (499)
++..+...+..+.+.+.| ++.+. .+|.....+| .+..... .+.+-. .....+++.+|.++ |++++.
T Consensus 406 ~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~P 481 (527)
T PRK09275 406 KAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLP 481 (527)
T ss_pred HHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeC
Confidence 566666667777777776 22222 2455544444 2221100 000000 00134566666655 555555
Q ss_pred eeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 456 HTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 456 ~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
++.++ +..++|+|++| .+++++.++.+.|+++.++..
T Consensus 482 G~~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 482 GGGFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred chhhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 55554 24679999964 578899999999998887654
No 252
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=9.3e-15 Score=147.00 Aligned_cols=286 Identities=13% Similarity=0.067 Sum_probs=183.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++...+.++ +++.++.+.+ ..++|+|+++++..++.+..+ ++..|+++.+++..+...
T Consensus 65 ~~~~~lr~~----ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~-----------~gd~V~v~~P~y~~~~~~ 122 (357)
T PRK14809 65 ASHADLTAA----LADRWDVSPE-------QVWLANGGDGALDYLARAMLD-----------PGDTVLVPDPGFAYYGMS 122 (357)
T ss_pred CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHH
Confidence 444556555 5566677654 468999999988776665432 566788898888888888
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD 282 (499)
+...|. .++.+|++.+++|.+|.+++++.+. . +.+|+++.++||||.+-+.+++.++++.. ++++++|
T Consensus 123 ~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~D 192 (357)
T PRK14809 123 ARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVD 192 (357)
T ss_pred HHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEe
Confidence 888999 8999998754458888888877642 1 23677789999999998887777777654 7899999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 360 (499)
.+|+.+.. .+.........++ -.+..++.|.++.| .-+|+++..++ .+ +.+.. ...+
T Consensus 193 e~y~~~~~-~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~~~~~~~-~~-~~~~~~~~~~----------------- 251 (357)
T PRK14809 193 EAYGEFAE-RPSAVALVEERDD-VAVLRTFSKAYGLAGLRLGYAVVPEE-WA-DAYARVNTPF----------------- 251 (357)
T ss_pred chhhhccC-CchhHHHHhhCCC-EEEEecchhHhcCcchhheeeecCHH-HH-HHHHHhCCCC-----------------
Confidence 99987542 1111111111111 13456789999754 66898887543 22 22221 1000
Q ss_pred ccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
....+..++++..+. .+.+++..+...+..+++.+.|... .+ ++..+.+.+++.. .
T Consensus 252 ------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~g~f~~~~~~~------------~ 308 (357)
T PRK14809 252 ------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TW-ESAGNFVLAEVGD------------A 308 (357)
T ss_pred ------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cC-CCCCCEEEEECCC------------H
Confidence 012344455555543 3445566666666667777777543 12 4455555555521 2
Q ss_pred HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++.+.+.++|..+..+..+....++|++++ +.+++++++++|+++.
T Consensus 309 ~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 309 SAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLNEVL 355 (357)
T ss_pred HHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 4566777777865555544544468999985 4689999999998764
No 253
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.72 E-value=7.9e-15 Score=149.48 Aligned_cols=295 Identities=15% Similarity=0.140 Sum_probs=173.5
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++.+.|+++.+.+. .+++++||+||..|+..+|.......+....+..+|......|-+..-++.+.+-.
T Consensus 85 ~~l~~~l~~~~~~~~---------~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~ 155 (396)
T PRK04073 85 GPWYEKVAKLTGKDM---------VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEE 155 (396)
T ss_pred HHHHHHHHhcCCCCe---------EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCc
Confidence 334444777776543 38999999999999999986421110000002234444555677666665554421
Q ss_pred C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842 212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW 278 (499)
Q Consensus 212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~ 278 (499)
. ..+..+|. -|+++|++.+.+++ .+|++..+.+++|.+-| +++|.++|++||++
T Consensus 156 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~------~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 222 (396)
T PRK04073 156 EYKRGFGPMLPGIKKIPY-------GDLEALKAAITPNT------AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVL 222 (396)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhcccCe------EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 0 01222322 17889988886433 47888888899999855 89999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
+++|++|.++......+.....++ ..|.+++ .|.++.+ ...|+++.+++ +.+.+.... ..
T Consensus 223 li~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~~--i~~~~~~~~----~~---------- 283 (396)
T PRK04073 223 FIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANRD--ILGVFTPGS----HG---------- 283 (396)
T ss_pred EEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhhcCCC----CC----------
Confidence 999999987532111111011222 3677776 5988766 56788877542 222221100 00
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD--PRFEIVVPRHFALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 435 (499)
. +. ++ ..+...+++..+..-.-....++..++.+++.+.|+++ +.+..+ ++...++.+.+...
T Consensus 284 ~--t~-~~---~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~-------- 348 (396)
T PRK04073 284 S--TF-GG---NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP-------- 348 (396)
T ss_pred C--CC-CC---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch--------
Confidence 0 00 11 23444444444311001234566677888999988876 222222 23334455554321
Q ss_pred HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
...+.++|.++|.++ .+ .+..++|+++ +...|++||++++++|+++.
T Consensus 349 ---~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 349 ---ARPYCEALKEEGLLC-KE---THETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ---HHHHHHHHHHCCeEE-ec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 356777788888553 32 1335799998 46789999999999998763
No 254
>PRK04311 selenocysteine synthase; Provisional
Probab=99.72 E-value=6.6e-15 Score=150.65 Aligned_cols=284 Identities=17% Similarity=0.147 Sum_probs=174.2
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh------HHHHHH
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST------FAKVCK 206 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s------~~ka~~ 206 (499)
.+.+.+++++|.+.. +++++|+.|+..++.+. . ++..|++|+..|++ +...++
T Consensus 131 ~~e~~lA~l~Gae~a---------~vv~sgtaAl~l~l~~l-~-----------~GdeVIvs~~e~~~~ggs~~i~~~~~ 189 (464)
T PRK04311 131 ALAALLCALTGAEDA---------LVVNNNAAAVLLALNAL-A-----------AGKEVIVSRGELVEIGGAFRIPDVMR 189 (464)
T ss_pred HHHHHHHHHhCCCeE---------EEECCHHHHHHHHHHHh-C-----------CCCEEEEcchhhhhcCcchhhHHHHH
Confidence 455569999998654 88888998888777432 1 45678888876663 345567
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cc--ccCChhHHHHHHHHhCCEEEee
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TT--AVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G--~id~l~~I~~ia~~~~~~lhvD 282 (499)
..|+ .+++|+++. ..++++++++|+++++ +|+..+.+|+ +| ..-|+++|+++||+||+++++|
T Consensus 190 ~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD 256 (464)
T PRK04311 190 QAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD 256 (464)
T ss_pred HCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence 7888 899888642 4689999999987765 7778888775 44 5679999999999999999999
Q ss_pred ccccchh----c---cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 283 AAYAGSA----C---ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 283 ~A~g~~~----~---~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
++.|... + ..|...... -.++|.+++++|||+++| .+|+++.+++ .+ +.+...+
T Consensus 257 ~gsG~l~~~~~~gl~~~p~~~~~l--~~GaDiv~fSg~K~LgGp-~~G~i~g~~~-li-~~l~~~~-------------- 317 (464)
T PRK04311 257 LGSGSLVDLSQYGLPDEPTVQELL--AAGVDLVTFSGDKLLGGP-QAGIIVGKKE-LI-ARLKKHP-------------- 317 (464)
T ss_pred CCCcccccchhccCCCCCchhhHH--hcCCcEEEecCcccccCC-ceEEEEEcHH-HH-HHHhhch--------------
Confidence 8654321 0 011111111 025999999999999988 5888888653 22 2221110
Q ss_pred cCCCcccCCCCCCC-----cHHHHHHHHHh-----------cHHHHHHHHHHHHHHHHHHHHHHhcCC--C--eEEEcC-
Q 010842 356 DFKDWQVGTGRRFK-----SLRLWMVLRSY-----------GVLNLQSHIRSDIRLAKMFEGFVKSDP--R--FEIVVP- 414 (499)
Q Consensus 356 ~~~~~~~~~sr~~~-----al~~~~~l~~~-----------g~~g~~~~~~~~~~~a~~l~~~L~~~~--~--~~~~~~- 414 (499)
..|.++ ...+..++..+ +..-+....++..++|+.+.+.|+..+ + +++...
T Consensus 318 --------~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~ 389 (464)
T PRK04311 318 --------LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSF 389 (464)
T ss_pred --------hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEcc
Confidence 111111 11122222211 112244455777788899999998764 3 344421
Q ss_pred --------C--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 415 --------R--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 415 --------~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
| .++.+++.+.+.. ....++.++|.+.-.-++. ..-+++.++= + ....++|++.+++
T Consensus 390 ~~~gggs~p~~~~~~~~v~~~~~~--------~~~~~l~~~lr~~~~~i~~-r~~~~~~~ld--~--r~~~~~~~~~~~~ 456 (464)
T PRK04311 390 SQVGGGSLPVDRLPSAAVTLTPKD--------RSLEALAARLRLLPPPVIG-RIEDGRLLLD--L--RTLEEEDEERLAA 456 (464)
T ss_pred CccCCCCCcCCCCCeEEEEEeCCC--------CCHHHHHHHHhcCCCCEEE-EEECCEEEEE--e--CcCCHHHHHHHHH
Confidence 2 2344555554421 1135566666543332333 2334443332 2 2247889999999
Q ss_pred HHHHHH
Q 010842 485 LIMEGA 490 (499)
Q Consensus 485 ~l~~~~ 490 (499)
.|+++.
T Consensus 457 ~~~~~~ 462 (464)
T PRK04311 457 ALLEAL 462 (464)
T ss_pred HHHHHh
Confidence 998874
No 255
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=2.1e-14 Score=143.75 Aligned_cols=323 Identities=13% Similarity=0.074 Sum_probs=196.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
-..|..+|....||++ +++++|.+.. +.|++||.|+..+..... + ++.+| +...
T Consensus 71 Dd~Yagd~s~~~LE~~----vAe~lG~e~a---------V~v~sGTaAl~ll~~l~v----~-------pGd~V--p~n~ 124 (460)
T PRK13237 71 DEAYAGSRNFYHLEET----VQEYYGFKHV---------VPTHQGRGAENLLSRIAI----K-------PGQYV--PGNM 124 (460)
T ss_pred chhhcCCCcHHHHHHH----HHHHHCCCeE---------EEeCCHHHHHHHHHHhCC----C-------CcCEE--CCcc
Confidence 3568889999999999 8889998864 999999999886432111 0 34443 7777
Q ss_pred chhHHHH-HHHhCCCCCCeEEeeCC---------CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc-cc---C
Q 010842 198 HSTFAKV-CKLAGVSPANIRALPTS---------VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT-AV---D 263 (499)
Q Consensus 198 H~s~~ka-~~~~G~g~~~v~~v~~~---------~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G-~i---d 263 (499)
|+...++ +...|. ..+-++.+ +. ++.||+++|+++|++... ..+.+|.++..++..| .. +
T Consensus 125 ~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~-tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~ 198 (460)
T PRK13237 125 YFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPF-KGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMA 198 (460)
T ss_pred chHhhHHHHHhCCc---EEEeeecccccccccCCCC-CCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHH
Confidence 8877776 666666 44433211 22 479999999999985422 1223466666666664 33 5
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhc-cC----ccchhhhc------CCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSAC-IC----PEFRHYLN------GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL 332 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~-~~----~~~~~~~~------g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~ 332 (499)
++++|.++|++||+++|.|||+..... +. +.+...-- -...+|.+++|+||.+.+|. .|++.++|++.
T Consensus 199 ~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL 277 (460)
T PRK13237 199 NMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEEL 277 (460)
T ss_pred hHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHH
Confidence 789999999999999999999865422 22 11221110 12359999999999999875 68888998876
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHH-HHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQ-SHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~-~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
..+.-.....|-.. ..|+--.+|...+++ ..+. ++.+ .++++..+.++||.+.|.+. |+.+
T Consensus 278 ~~~~r~~~~~~eG~-----------~tygg~~grd~~alA--vgl~----E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv 339 (460)
T PRK13237 278 FDEAKELVVVYEGM-----------PSYGGMAGRDMEAMA--IGIE----ESVQYEYIEHRVGQVRYLGEKLLAA-GVPI 339 (460)
T ss_pred HHHHHHhccccCCC-----------cCCCChhhhHHHHHH--hHHH----hhchHHHHHHHHHHHHHHHHHHHHC-CCce
Confidence 65443332222111 011111123322222 1222 2222 77788889999999999986 8988
Q ss_pred EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeE------CC------EEEEEEeccCCCCcHH
Q 010842 412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIV------GG------LYMLRFAVGASLTDER 477 (499)
Q Consensus 412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~------~g------~~~lRi~~~~~~~t~~ 477 (499)
+.|+....|.+......+.-.. ...-.+.|...|. +.|+=-+- ++.. .+ -..+|+++---.-|.+
T Consensus 340 ~~p~ggH~v~vda~~~lph~~~-~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~ 418 (460)
T PRK13237 340 VEPVGGHAVFLDARRFLPHLPQ-DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYA 418 (460)
T ss_pred ecCCCceEEEEEhHHhCCCCCc-ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHH
Confidence 8766555454432210000000 0112344544443 33431111 1110 11 2579999843344899
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADR 492 (499)
Q Consensus 478 di~~l~~~l~~~~~~ 492 (499)
++|.+.++|..+.++
T Consensus 419 h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 419 HMDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 256
>PRK07505 hypothetical protein; Provisional
Probab=99.72 E-value=8.5e-15 Score=149.62 Aligned_cols=300 Identities=10% Similarity=0.021 Sum_probs=174.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
..+...++.+.+++++|. .. +++++|++|+..++..++..... +.++.+|+.....|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~~---------~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-SV---------LTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-CE---------EEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 355566677779999987 43 66778889999888766532111 1123456667788988753322
Q ss_pred H--hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 207 L--AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 207 ~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
. .+. +++.+|. .|+++|++++++++ .+++++.|.+++|.+.|+++|.++|++||+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2 233 6777764 38899998885432 3677888899999999999999999999999999999
Q ss_pred ccchhc--cCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842 285 YAGSAC--ICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 285 ~g~~~~--~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 359 (499)
|+...+ ....+.....+. .....++.+.-|.++.+ .|++++.++... +.+.. ...|.+.
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~t~~------------- 281 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPLAFS------------- 281 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCceeC-------------
Confidence 853211 111111111121 22345566888988755 366655454433 33321 1122111
Q ss_pred cccCCCCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 360 WQVGTGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 360 ~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
.+.. .....+..++..+..+.+.+..++..++.+.+.+.+... .....+.+..+.... ...
T Consensus 282 ----~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~---------~~~ 343 (402)
T PRK07505 282 ----QSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGD---------EDT 343 (402)
T ss_pred ----CCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCC---------HHH
Confidence 1111 112223334443444445544444444444443332211 111222222222221 123
Q ss_pred HHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
..++.++|.++|+++..... ..+..++|+++. ...|++|+++++++|+++.++
T Consensus 344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 56788888888975433211 123368999994 788999999999999988654
No 257
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.72 E-value=4.3e-15 Score=149.86 Aligned_cols=308 Identities=15% Similarity=0.087 Sum_probs=187.7
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+....+. ..|....+..++.+.+.+|+.+..|.+ -+. ...++|+|+++++..++.+..-.
T Consensus 43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------ 109 (364)
T PRK07865 43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP-----AAVLPVIGSKELVAWLPTLLGLG------ 109 (364)
T ss_pred HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc-----ccEEEccChHHHHHHHHHHHcCC------
Confidence 3444545443332 256666677899999999999988764 221 24688999988876654443111
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++.++|..+..+++.+|+ +++.++. +++++. . .+.+|+++.++||||.+
T Consensus 110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV 164 (364)
T ss_pred ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence 567788999999999999999999 8777642 122221 1 23467777899999988
Q ss_pred ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc---C-CCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN---G-IERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~---g-~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
+.+++|.++|+++|+++++|.+|+.+....+....... + ...-..++.+..|.++.| ..+|+++. +++..
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~- 242 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALV- 242 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHH-
Confidence 45788899999999999999999865331111110000 1 001236778899998655 45777654 33333
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
+.+.....+... ....+...++...+. .+.+++..+...+.++.+.+.|++. ++.+.
T Consensus 243 ~~~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 300 (364)
T PRK07865 243 AELLEVRKHAGM--------------------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD- 300 (364)
T ss_pred HHHHHHHHhcCC--------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-
Confidence 222111000000 001222233333332 2445566677777888888999886 67654
Q ss_pred CCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 414 PRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 414 ~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
+|..+.+ .+.. +.. ...+.+.+.+.|+.+..+..+. +..++|++++. +++++++.++.|+
T Consensus 301 ~~~~~~~~~~~~-~~~----------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~~~~~~l~ 363 (364)
T PRK07865 301 HSEAGLYLWATR-GED----------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIAAAVERLA 363 (364)
T ss_pred CCCccEEEEEeC-CCC----------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHHHHHHHhh
Confidence 3444433 3333 211 2445667777886554443332 35689999962 5899999998874
No 258
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.72 E-value=6.1e-15 Score=148.26 Aligned_cols=306 Identities=15% Similarity=0.058 Sum_probs=185.6
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
.+.+.+..... ...|....+..++.+++.+|+.+.+|.+ -.. ...++|+|+++++..++.+..-.
T Consensus 38 ~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------- 103 (357)
T TIGR03539 38 LIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP-----TAVLPVIGTKELVAWLPTLLGLG------- 103 (357)
T ss_pred HHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-----CeEEEccChHHHHHHHHHHHcCC-------
Confidence 34444444332 2345556677899999999999987764 221 24688999999876655433111
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|..+...++.+|+ +++.++ |++.++. + .+.+|+++.++||||.+-
T Consensus 104 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~ 159 (357)
T TIGR03539 104 ---PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVL 159 (357)
T ss_pred ---CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccC
Confidence 567889999999999999999898 776663 1222221 1 234777888999999985
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-----CCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
+ +++|.++|+++|+++++|.+|+.+..- +.....+. +...-..+..+..|.++.| .-+|+++. +++...
T Consensus 160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~ 237 (357)
T TIGR03539 160 SVDELRAIVAWARERGAVVASDECYLELGWE-GRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVA 237 (357)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhhccC-CCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHH
Confidence 4 678999999999999999999754321 11111111 0001135667899998655 34677764 333322
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
+.......+. .....+...++...+. ...++...++..+.++++.+.|++. ++.+.
T Consensus 238 ~~~~~~~~~~---------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~- 294 (357)
T TIGR03539 238 ELLTVRKHAG---------------------LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID- 294 (357)
T ss_pred HHHHHHhhcc---------------------cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-
Confidence 2111110000 0011233333333332 2445556666677788888888875 66654
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
+|..+.+.+...+.. ...+.++|.+.|+.+..+..+ .+..++|+++++ +++++++.++.|
T Consensus 295 ~p~~~~~~~~~~~~~----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 295 HSEAGLYLWATRGED----------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred CCCccEEEEEECCCC----------HHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 455555554433321 345677777788654443322 235789999963 578899988765
No 259
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.71 E-value=1.5e-14 Score=147.32 Aligned_cols=300 Identities=12% Similarity=0.083 Sum_probs=177.4
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
.++.+.|+++++.+. ..++++||+||..|+..+|.....+ .+. ++.+|......|-+..-+....|.
T Consensus 80 ~~la~~L~~~~~~~~---------~~f~~SGseA~e~Alk~ar~~~~~~---~~~~r~~ii~~~~~yHG~~~~~~~~~~~ 147 (397)
T TIGR03246 80 LRLAKKLVDATFADK---------VFFCNSGAEANEAALKLARRYALDK---HGADKSEIVAFKNSFHGRTLFTVSVGGQ 147 (397)
T ss_pred HHHHHHHHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCcCCccHHHHHhcCC
Confidence 334444777776543 3899999999999999998653211 011 234455566678776655554442
Q ss_pred C---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCC
Q 010842 211 S---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGI 277 (499)
Q Consensus 211 g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~ 277 (499)
. ...+..+|. -|+++|++.+.++ +.+|++.-..++.|.+ +.+++|.++|++||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 214 (397)
T TIGR03246 148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA 214 (397)
T ss_pred cccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 012233332 2789999988643 3366666555555644 459999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
++++|++|.|+.....-+.....++ ..|.+++ -|.++..+..|.++.+++ +.+.+.... ..
T Consensus 215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~--i~~~~~~~~----~~---------- 275 (397)
T TIGR03246 215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE--IAAHLKVGT----HG---------- 275 (397)
T ss_pred EEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH--HHHhccCCC----cC----------
Confidence 9999999866522111111112244 3787765 688865566888877653 323332110 00
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEc--CCCceEEEEEecCCCCCCcch
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIVV--PRHFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~--~~~~~~v~f~~~~~~~~~~~~ 434 (499)
.+. .+.+.......+++..+. -.++.++..++.+++.+.|+++.. +.++. .....++.+.+.+.
T Consensus 276 --~t~-~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~------- 342 (397)
T TIGR03246 276 --TTY-GGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA------- 342 (397)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc-------
Confidence 001 111212223334444432 245677788888888888876521 11221 12223344444321
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.......+.+.|.++|.++... +..++|+++. ...|++||++++++|.++..++
T Consensus 343 ~~~~~~~~~~~l~~~Gv~~~~~----g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 343 YQGKAKQFVNAAAEEGVIALIA----GPNVVRFAPS-LVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred hhhHHHHHHHHHHHCCeEEeec----CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 1234567888888999654332 3467999884 7789999999999999887654
No 260
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.71 E-value=1.3e-14 Score=148.05 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=116.3
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch------hHHHHH
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS------TFAKVC 205 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~------s~~ka~ 205 (499)
..+.+.+++++|.+.. +++++|+.|+..++.+. . ++..|++++..|. ++...+
T Consensus 125 ~~le~~lA~l~gae~a---------lvv~sg~aAi~l~l~~l-~-----------~GdeVIvs~~e~v~~ggs~~i~~~~ 183 (454)
T TIGR00474 125 SHVEGLLCELTGAEDA---------LVVNNNAAAVLLALNTL-A-----------KGKEVIVSRGELVEIGGSFRIPDVM 183 (454)
T ss_pred HHHHHHHHHHhCCCcE---------EEECCHHHHHHHHHHHh-C-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence 4455669999998764 77888998887777432 1 4667888876652 355567
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cc--ccCChhHHHHHHHHhCCEEEe
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TT--AVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G--~id~l~~I~~ia~~~~~~lhv 281 (499)
+..|+ .++.++++ + ..|+++++++|.++++ +|+..+.+|+ .| .+-|+++|+++||+||++++|
T Consensus 184 ~~~G~---~~~~v~~~--~--~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 184 EQSGA---KLVEVGTT--N--RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred HHcCC---EEEEeCCC--C--CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77888 89888764 2 4689999999987664 6777777776 46 478999999999999999999
Q ss_pred eccccchhc-------cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842 282 DAAYAGSAC-------ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 282 D~A~g~~~~-------~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
|++.|...- ..|...... -.++|.+++++|||+++|. +|+++.+++
T Consensus 251 D~~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 251 DLGSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred ECCCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 986443200 001101111 1249999999999999884 788888753
No 261
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.71 E-value=2e-14 Score=146.93 Aligned_cols=309 Identities=12% Similarity=0.092 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc---CCeEEEcCCCCchhHHHHHH
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM---HKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~---~~~~i~~s~~~H~s~~ka~~ 206 (499)
....+.+.+++++|.+. .+++++||+||..|+..++...... .|. +..+|......|-+...++.
T Consensus 74 ~~~~~~~~l~~~~~~~~---------~~~~~SGs~A~e~al~~~~~~~~~~---~~~~~~~~~vl~~~~~~Hg~~~~~~~ 141 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK---------VLPMNSGAEAGETALKFARKWGYEV---KGIPENQAKIIFCNGNFSGRTIGACS 141 (400)
T ss_pred HHHHHHHHHHhCCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---cCCCCCCCeEEEECCCcCCccHHHHh
Confidence 33444555777777654 3899999999999999987542111 121 23455556666777666655
Q ss_pred HhCCCCCCeEEeeCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEE
Q 010842 207 LAGVSPANIRALPTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVH 280 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lh 280 (499)
..+-........|...+- -...|+++|++.++. ..+.+|++....+++|.+-| +++|.++|++||++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli 216 (400)
T PTZ00125 142 ASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLI 216 (400)
T ss_pred hcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 543210000001110000 002389999998851 12456777777889999877 9999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
+|++|.++......+.....++ ..|.++++ |+++.++ .+|+++.+++ +.+.+.... ...
T Consensus 217 ~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~--~~~~~~~~~---~~~------------ 276 (400)
T PTZ00125 217 VDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD--VMLVIKPGE---HGS------------ 276 (400)
T ss_pred EeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH--HHhhccCCC---CCC------------
Confidence 9999976422111111112233 36888775 9998765 7888887653 222222110 000
Q ss_pred cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 435 (499)
+. .+.+........+++.+..+++ .++..++.+++.+.|++. +.+..+ .+...++.+.+.+..
T Consensus 277 -t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~------- 343 (400)
T PTZ00125 277 -TY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD------- 343 (400)
T ss_pred -CC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc-------
Confidence 00 1111112222233444433333 344455666666666553 322222 233344455554311
Q ss_pred HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
......+.++|.++|..+ .+. +..++|++++ ...++++|++++++|.++.+++
T Consensus 344 ~~~~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 344 GVNAWDLCLKLKENGLLA-KPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred chHHHHHHHHHHHCCeEE-eec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 122456778888888543 332 3467999984 6689999999999999988776
No 262
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.71 E-value=1e-14 Score=149.80 Aligned_cols=342 Identities=12% Similarity=0.067 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHcccC-----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842 103 AGFLGEMLCACFNSV-----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~ 177 (499)
...+.+.+...++.. ...|....+...+.+++.+|+.+..|.+-+. ...++|+|+++|+..++.+..+..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~-----~~I~it~Ga~~al~~~~~~l~~~~ 121 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP-----QNIALTNGSQSAFFYLFNLFAGRR 121 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccChHHHHHHHHHHHhccc
Confidence 455666666655432 1346555667899999999999887764221 146889999998877766543210
Q ss_pred HhHhhhhccCCeEEEc-CCCCchhHHHHHHHhCCCC-CCeEEeeCCCCC-CCccCHHHHHHHHHHHHHcCCccEEEEEec
Q 010842 178 LDAVGAENMHKLVVYG-SDQTHSTFAKVCKLAGVSP-ANIRALPTSVDA-NFSLSPQLLRRAVEADVEAGLVPLFLCATV 254 (499)
Q Consensus 178 ~~~~~~~g~~~~~i~~-s~~~H~s~~ka~~~~G~g~-~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~ 254 (499)
. ..++..|++ ..++++.+...+...|.-. ..+..++++.++ .|.+|+++|+ +.. .+.+++.+.
T Consensus 122 ~------~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 122 A------DGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred c------CCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 0 013456777 5778877777665443200 023344544321 3689999997 222 234788889
Q ss_pred CCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842 255 GTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 255 gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~ 331 (499)
++||||.+-+ +++|+++|++|++|+++|.+|+.... ...+.........--.+..++.|++....-+|+++.. +.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~-~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIAD-EE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCccccCCeEEEecccccCCCcceEEEEeCC-HH
Confidence 9999999955 78888999999999999999964211 0001111011111124557889975444668887653 33
Q ss_pred hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHH-----HHHHHHHHHHHHHHHHhcC
Q 010842 332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS-----HIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~-----~~~~~~~~a~~l~~~L~~~ 406 (499)
.+ +.+.....+.. .....+...++...+....+.+ ..+...+..+.+.+.|++.
T Consensus 266 l~-~~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 266 II-EALSNMNGIIS--------------------LAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HH-HHHHHHHHHhc--------------------cCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 22221111100 0012344455555543222222 2222334445555555542
Q ss_pred -C--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-C--------EEEEEEeccCCCC
Q 010842 407 -P--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-G--------LYMLRFAVGASLT 474 (499)
Q Consensus 407 -~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g--------~~~lRi~~~~~~~ 474 (499)
+ ++++..+.....+++.+.+.. .+ ..++.+.+.++|+.+..+..+. + ..++|++++ .
T Consensus 325 l~~~~~~~~~p~gg~fiw~~~~~~~------~~--~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~---~ 393 (416)
T PRK09440 325 LPDEPCLIHKPEGAIFLWLWFKDLP------IT--TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV---Q 393 (416)
T ss_pred cccCCeEEecCCCceEEEEECCCCC------CC--HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec---C
Confidence 2 355443333455555554311 01 2456666777786555443331 1 248999996 2
Q ss_pred cHHHHHHHHHHHHHHHHHHhccC
Q 010842 475 DERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
+++++++++++|.++.++..+++
T Consensus 394 ~~~~l~~~i~~l~~~~~~~~~~~ 416 (416)
T PRK09440 394 DDEEIEKGIAILAEEVEKAYAES 416 (416)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcC
Confidence 68999999999999988876653
No 263
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.71 E-value=3.5e-14 Score=146.49 Aligned_cols=334 Identities=14% Similarity=0.071 Sum_probs=218.0
Q ss_pred HHHHHHHHHHcc---cC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 104 GFLGEMLCACFN---SV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 104 ~~~~~~l~~~~n---~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
..+.+.+...+. .. ...|....+...+.+++.+++....|..... ...++|+|+++|+...+.+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~---- 177 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD---- 177 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC----
Confidence 444555544442 22 3456666788999999999999888875432 2478999998887765555432
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
+++.|++.+++|+....+.+.+|+ +++.||+|++ .||+++|++.+.... .-++.+.....|||
T Consensus 178 -------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPt 240 (459)
T COG1167 178 -------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPT 240 (459)
T ss_pred -------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCC
Confidence 688999999999999999999999 9999999976 599999999987641 12345555567999
Q ss_pred cccCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842 260 TAVDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV 334 (499)
Q Consensus 260 G~id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~ 334 (499)
|..-++ ++|.++|++|++|++.|..|+-+....+.... +..+ ..--....++.|.+.....+|++..... +.
T Consensus 241 G~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~--~~ 317 (459)
T COG1167 241 GVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE--LI 317 (459)
T ss_pred CCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH--HH
Confidence 999666 68999999999999999999876554322211 1111 1233567788999998888999987653 11
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcC-CCeEE
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSD-PRFEI 411 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~ 411 (499)
+.+......... .+..+....+..-+. -| ...++++.+...+..+.+.+.|.+. |+...
T Consensus 318 ~~~~~~k~~~~~-----------------~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~ 379 (459)
T COG1167 318 EKLLRLKQAADL-----------------GPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELAT 379 (459)
T ss_pred HHHHHHHHHhcC-----------------CCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 222111111000 000001111112222 23 3344555555566677788888776 32333
Q ss_pred EcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeEC----CEEEEEEeccCCCCcHHHHHHHHHH
Q 010842 412 VVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIVG----GLYMLRFAVGASLTDERHVVAAWEL 485 (499)
Q Consensus 412 ~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~ 485 (499)
+..|..+ .++.++++.- ...++.++..++|..+.. +..+. ...++|+++++ .+.++|++.++.
T Consensus 380 ~~~p~gG~flwl~l~~~~---------~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~ 448 (459)
T COG1167 380 WTRPEGGLFLWLELPEGI---------DARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKR 448 (459)
T ss_pred eecCCceEEEEEEcCCCC---------CHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHH
Confidence 4445444 4445554421 156778888888887665 33332 24589999963 568999999999
Q ss_pred HHHHHHHHhc
Q 010842 486 IMEGADRLFK 495 (499)
Q Consensus 486 l~~~~~~l~~ 495 (499)
|.++..+...
T Consensus 449 l~~~~~~~~~ 458 (459)
T COG1167 449 LAALLREAAA 458 (459)
T ss_pred HHHHHHHHhc
Confidence 9988876643
No 264
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.70 E-value=8.3e-15 Score=151.26 Aligned_cols=358 Identities=12% Similarity=0.120 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHcccCCcccccChh-hHHHHHHHHHHHHHHcCC---CCccccCCCccEEEcCChHHHHHHHHHHHH-HHH
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPA-STELEIVVMDWLATMLKL---PKTFMFSGTGGGVIQNTTSDSILVTLIAAR-DRA 177 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~-~~~lE~~~~~~la~l~g~---~~~~~~~~~~~g~~t~ggt~A~~~al~~ar-~~~ 177 (499)
+..+-++.....+. .|....+ ....|+.+.+++.+.++. +.+. -..++|+|+++|+..++.+.. +..
T Consensus 109 ~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~-----~~V~it~Gat~al~~~~~~l~~~~l 180 (521)
T TIGR03801 109 DAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGE-----FDLFAVEGGTAAMCYIFDSLKANEL 180 (521)
T ss_pred CHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc-----CeEEEeCCHHHHHHHHHHHHhHhhc
Confidence 45555555554433 3543333 345555555677776543 2210 046899999999888776532 111
Q ss_pred HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC-----CccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN-----FSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~-----~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
.. ++..|++..+++..+...+.+.|.|. .++.|++++.+. |++|+++|+++++++++ +|++
T Consensus 181 l~-------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k------ai~l 246 (521)
T TIGR03801 181 LK-------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK------ALFV 246 (521)
T ss_pred CC-------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCCc------EEEE
Confidence 11 67789999999999999988875532 677777764333 89999999987755443 7788
Q ss_pred ecCCCcccccCC---hhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEE
Q 010842 253 TVGTTSTTAVDN---VEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLW 326 (499)
Q Consensus 253 t~gtt~~G~id~---l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~ 326 (499)
+.|+||||.+-+ +++|+++|++| ++|+++|.+|+.+.. .+.........--.++.+..|.++.| .-.|+++
T Consensus 247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~ 323 (521)
T TIGR03801 247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIA 323 (521)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhh
Confidence 899999999955 78888899987 999999999986542 22222222221235667889998655 6688888
Q ss_pred EeCchhHH-----------HhhcCCccCCCCCCCCCCCcccCCCcccCCCC--------CCCcHHHH-----HHHHHh--
Q 010842 327 VKQPGLLV-----------KALSTDPEYLKNKPSESNSVVDFKDWQVGTGR--------RFKSLRLW-----MVLRSY-- 380 (499)
Q Consensus 327 ~r~~~~l~-----------~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr--------~~~al~~~-----~~l~~~-- 380 (499)
..+...+. +.+...-..+.... ....|.+.-+.-+| .......+ +....+
T Consensus 324 ~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p----~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~ 399 (521)
T TIGR03801 324 LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEP----RKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK 399 (521)
T ss_pred cCchHHHHHHHHhccHHHHHHHhhhhccccCCh----hhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc
Confidence 76542211 11111111111100 00111111111010 00111111 122222
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEE-EecCCCC--CCcchhH-----HHHHHHHHHHHhc-C
Q 010842 381 GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCF-RLNPYPH--SGSADTE-----MLNRKLLDWVNST-G 450 (499)
Q Consensus 381 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f-~~~~~~~--~~~~~~~-----~~~~~l~~~l~~~-g 450 (499)
+....++..+...+..+.+.+.| ++.+. .++.....+| .+..... .+.+-.+ ....+++.+|.++ |
T Consensus 400 ~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~g 475 (521)
T TIGR03801 400 ENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETG 475 (521)
T ss_pred chhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCC
Confidence 23445556666667777777776 33322 2455444443 3321100 0000000 0124566666654 6
Q ss_pred CEEEEeeeECC-EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 451 RVYLTHTIVGG-LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 451 ~~~~~~~~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+++.+..++. ..++|+|++| .+++++.++.+.|+++.++...
T Consensus 476 V~v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 476 IVLLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred EEEeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 55555555543 4579999964 5788999999999999877654
No 265
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.70 E-value=8.9e-15 Score=133.68 Aligned_cols=297 Identities=14% Similarity=0.103 Sum_probs=202.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
++.+.+.+...++++-|-++. ++.+++-.||.-++.+..+ ++..|+-.+..|.|+....+
T Consensus 110 tq~iHk~LE~kiAqfh~rED~---------ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGir 169 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDT---------ILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIR 169 (417)
T ss_pred chHHHHHHHHHHHHHhCCCce---------EEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhH
Confidence 455666666669999887765 8889988888777776643 56678888889999988777
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
++.- ...+|+.+|+..+.+..+.. -.+|+....-+..|.+.|+++|.+++++||..+.+|.||+
T Consensus 170 Lckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHa 233 (417)
T KOG1359|consen 170 LCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHA 233 (417)
T ss_pred HHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccc
Confidence 6642 23788999998887654322 2345555566899999999999999999999999999998
Q ss_pred chhccCccchh---hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCccc
Q 010842 287 GSACICPEFRH---YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQV 362 (499)
Q Consensus 287 ~~~~~~~~~~~---~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~ 362 (499)
-+++- +.-+. .+.-...+|.+.....|.++.. ..|+. .-.+ .+...+ +...+||+...-.
T Consensus 234 Tgf~G-~tGrGt~E~~~vm~~vdiinsTLgKAlGga-~GGyt-tgp~-~li~llrqr~RpylFSnslp------------ 297 (417)
T KOG1359|consen 234 TGFFG-ETGRGTAEEFGVMGDVDIINSTLGKALGGA-SGGYT-TGPK-PLISLLRQRSRPYLFSNSLP------------ 297 (417)
T ss_pred ceeec-CCCCChHHHhCCCCcceehhhhhhhhhcCC-CCCCc-cCCh-hHHHHHHhcCCceeecCCCC------------
Confidence 76542 22221 2222346899999999998743 12332 2222 233333 4456788765311
Q ss_pred CCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 363 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
-.--..+.+++..+.. -.+.+.+...+.+++++..+.. ||.+.... .++..+.+.+ .++..+.
T Consensus 298 -pavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lGd---------a~lA~~~ 360 (417)
T KOG1359|consen 298 -PAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLGD---------ARLASKM 360 (417)
T ss_pred -hhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceeccc---------HHHHHHH
Confidence 0000123344333322 2455667778888999988765 99987543 2344333332 3456777
Q ss_pred HHHHHhcCCEEEE---eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLT---HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 443 ~~~l~~~g~~~~~---~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.|.+.|+.++. |....|+..+|+.+. ...|++|||++++++.++.+.+
T Consensus 361 ad~lLk~Gi~Vigfs~PvVP~gkariRVqiS-AaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 361 ADELLKRGIYVIGFSYPVVPKGKARIRVQIS-AAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHhcCceEEeecCCcCCCCceEEEEEEe-hhcCHHHHHHHHHHHHHHHHhh
Confidence 8889999986654 445678889999984 8889999999999999987654
No 266
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.70 E-value=4e-17 Score=157.14 Aligned_cols=251 Identities=19% Similarity=0.146 Sum_probs=159.9
Q ss_pred ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842 115 NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS 194 (499)
Q Consensus 115 n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s 194 (499)
|.....|...|.+.++|+. ++++||.+.. +|+.+||+||..++.+... +...|++.
T Consensus 19 ~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~a---------~f~~sGT~An~~al~~~~~-----------~~~~vi~~ 74 (290)
T PF01212_consen 19 NVGDDAYGEDPTTARLEER----IAELFGKEAA---------LFVPSGTMANQLALRAHLR-----------PGESVICA 74 (290)
T ss_dssp TSB-CCTTSSHHHHHHHHH----HHHHHTSSEE---------EEESSHHHHHHHHHHHHHH-----------TTEEEEEE
T ss_pred ccCCcccCCChhHHHHHHH----HHHHcCCCEE---------EEeCCCChHHHHHHHHHHh-----------cCCceecc
Confidence 3333468888888888888 8999999764 8999999999999988763 56678889
Q ss_pred CCCchhHHHH---HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-ccc---CChhH
Q 010842 195 DQTHSTFAKV---CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAV---DNVEP 267 (499)
Q Consensus 195 ~~~H~s~~ka---~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~i---d~l~~ 267 (499)
..+|..+.+. ..+.|. .++.|+.+.+| .+|+++|++.+........+|.+|..+.+++.. |.+ +.|++
T Consensus 75 ~~aHi~~~E~ga~~~~~G~---~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~a 149 (290)
T PF01212_consen 75 DTAHIHFDETGAIEELSGA---KLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRA 149 (290)
T ss_dssp TTEHHHHSSTTHHHHHTTC---EEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHH
T ss_pred ccceeeeeccchhhHhcCc---EEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHH
Confidence 8999876654 245788 89999876434 999999999998865433456667777766543 666 56788
Q ss_pred HHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
|.++||+||+++|+|||--..... ....+... ..+|++++++.|.++.|. .+++..+ ++.+.+.+.. ..++.
T Consensus 150 i~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~-Gavl~~~-~~~i~~~~~~-~k~~g 223 (290)
T PF01212_consen 150 ISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG-GAVLAGN-KEFIAKARRQ-RKRLG 223 (290)
T ss_dssp HHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS-EEEEEES-HHHHHHHHHH-HHHHT
T ss_pred HHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc-ceEEEec-hHHHHHHHHH-HHHhc
Confidence 888999999999999984322221 11122333 359999999999999884 3444444 3322222211 11111
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
+.- |..+.+.+ +......+.+.....+.+..++++++.+.|+.++ +.+..++..+
T Consensus 224 g~~-----------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~-~~~~~~~~tn 281 (290)
T PF01212_consen 224 GGM-----------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALG-GVLPRPVETN 281 (290)
T ss_dssp HHH-----------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEEC-EEEETTSS-H
T ss_pred cCe-----------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCc
Confidence 100 00011111 1111111223335677888899999999999984 5566555444
No 267
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.70 E-value=4.3e-14 Score=142.31 Aligned_cols=289 Identities=14% Similarity=0.025 Sum_probs=179.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
...+.++ +++.++.+.+ ..++|+|+++++..++.+.. ++..|++..+++..+...++
T Consensus 59 ~~~Lr~a----ia~~~~v~~~-------~I~it~G~~~~i~~~~~~l~------------~g~~vlv~~P~y~~~~~~~~ 115 (360)
T PRK07392 59 YRELRLA----LAQHHQLPPE-------WILPGNGAAELLTWAGRELA------------QLRAVYLITPAFGDYRRALR 115 (360)
T ss_pred HHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHHHhC------------CCCeEEEECCCcHHHHHHHH
Confidence 3455555 5555577655 46889999888776655431 23468889999999999999
Q ss_pred HhCCCCCCeEEeeCCCCCCC---ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 207 LAGVSPANIRALPTSVDANF---SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~---~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
.+|+ +++.||.+.++.+ ..+++.+++.. ..+.+++.+.++||||.+-+.++|.++++++++ +++|.
T Consensus 116 ~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE 184 (360)
T PRK07392 116 AFGA---TVKELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDE 184 (360)
T ss_pred HcCC---eEEEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEEC
Confidence 9999 9999999865533 24555554432 123478888999999999999999999999985 77799
Q ss_pred cccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 284 AYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 284 A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
+|..+..... .........+ --.+..+..|.++.| .-+|+++..++ .+ +.+......
T Consensus 185 ~y~~~~~~~~~~s~~~~~~~~~-~vi~i~S~SK~~~l~GlRiG~~v~~~~-~~-~~~~~~~~~----------------- 244 (360)
T PRK07392 185 AFMDFLPPDAEQSLIPCLAEYP-NLIILRSLTKFYSLPGLRLGYAIAHPD-RL-QRWQQWRDP----------------- 244 (360)
T ss_pred chhhhccCccccchHHHhhcCC-CEEEEEechhhhcCCchheeeeeCCHH-HH-HHHHhhCCC-----------------
Confidence 9987643211 1111111111 124566889999844 77899887542 23 222111000
Q ss_pred ccCCCCCCCcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
.....+..+++...+.... .+...+...+.++++.+.|++++++.+. ++..+.+.++... . .
T Consensus 245 -----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~-~----------~ 307 (360)
T PRK07392 245 -----WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG-S----------A 307 (360)
T ss_pred -----CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-C----------H
Confidence 0012344555554543323 3334455666778888999988888765 3444444444432 1 3
Q ss_pred HHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 440 ~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++.+++. +.|..+..+..+. +..++|++++ +.++.+++.++|.++.
T Consensus 308 ~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~----~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 308 LQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR----TEAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 45666654 4576555444443 3468999996 3455566666666543
No 268
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.70 E-value=2.5e-14 Score=145.16 Aligned_cols=299 Identities=13% Similarity=0.078 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~~ 207 (499)
....++.+++++++|.+. .++++||++|+..++.+++...... +.++..|+++..+ |.+...+ ..
T Consensus 69 ~~~~~l~~~la~~~g~~~---------~~~~~sg~~a~~~a~~~~~~~~~~~----~~~~~~vi~~~~~yh~~~~~~-~~ 134 (379)
T TIGR00707 69 EPQEELAEKLVEHSGADR---------VFFCNSGAEANEAALKLARKYTGDK----GKEKKKIIAFENSFHGRTMGA-LS 134 (379)
T ss_pred HHHHHHHHHHHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHhhcc----CCCCCeEEEECCCcCCccHHH-HH
Confidence 344555566889898763 3899999999999998776432100 1123445555544 4333333 22
Q ss_pred hCCCC-CCeEEeeCCCCCCCc--cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEE
Q 010842 208 AGVSP-ANIRALPTSVDANFS--LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 208 ~G~g~-~~v~~v~~~~~~~~~--~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lh 280 (499)
.+... ......++..+-.+. .|+++|++.+.+++ .+|+.+..++++|.. +++++|.++|+++|++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i 208 (379)
T TIGR00707 135 ATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLI 208 (379)
T ss_pred hcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 22200 000112222211111 18999999886543 366667666666754 348999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
+|++|.++............++ ..|.++ ..|.++.+...|+++.+. + +.+.+.... .. ..+
T Consensus 209 ~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~-~~~~~~~~~----~~----------~~~ 269 (379)
T TIGR00707 209 FDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-E-VAEAFTPGD----HG----------STF 269 (379)
T ss_pred EeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-H-HHhhhcCCC----CC----------CCC
Confidence 9999976422111010011122 246665 479998667788887753 2 222222110 00 000
Q ss_pred ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--E-cCCCceEEEEEecCCCCCCcchhHH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI--V-VPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--~-~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
.+.......++.+++.+.. .++.++..++++++++.|++. +... . .++..+++.+.+.+.
T Consensus 270 ---~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~---------- 332 (379)
T TIGR00707 270 ---GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP---------- 332 (379)
T ss_pred ---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc----------
Confidence 1111222334444454422 245566667777777777654 2211 1 112344556655331
Q ss_pred HHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
..++.++|.++|+.+... +..++|+++. ...|++++++++++|+++
T Consensus 333 -~~~~~~~l~~~Gv~v~~~----~~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 -CKDIVKKALEKGLLVNCA----GPKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred -HHHHHHHHHHCCcEEeeC----CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 356778888888654432 3367999983 667899999999999865
No 269
>PRK08637 hypothetical protein; Provisional
Probab=99.69 E-value=1.2e-14 Score=147.66 Aligned_cols=337 Identities=12% Similarity=0.093 Sum_probs=194.0
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
+-..+.+.+..........|....+...+.+++.+++.+..+ ..... ....++|+|+++++.+.+.+..+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~----- 91 (388)
T PRK08637 21 YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD----- 91 (388)
T ss_pred hHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-----
Confidence 334444444443233345566666777788777777766432 22110 01358999999988777665432
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++..|+++.+++..+...+ ...|. +++.||+..+ ++.+|+++|+++++.... ....+++.+.++|||
T Consensus 92 ------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~--~~~~~~~~~~P~NPT 159 (388)
T PRK08637 92 ------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYN--KGKVIVILNFPNNPT 159 (388)
T ss_pred ------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhcc--CCCEEEEEeCCCCCC
Confidence 5677999999999988875 46798 9999998422 247899999998872111 122457777799999
Q ss_pred ccc---CChhHHHHHHHH-----hCCEEEeeccccchhccCccchhh---hcCC-CCCceeE-ecccccccCC-CcceEE
Q 010842 260 TAV---DNVEPLAEVANE-----YGIWVHVDAAYAGSACICPEFRHY---LNGI-ERVDSFS-FSPHKWLLSY-LDCCCL 325 (499)
Q Consensus 260 G~i---d~l~~I~~ia~~-----~~~~lhvD~A~g~~~~~~~~~~~~---~~g~-~~aDsi~-~~~hK~l~~p-~~~g~l 325 (499)
|.+ +.+++|+++|++ |++++++|.+|..+.+........ +.+. ++.-++. .+..|.++.| .-+|++
T Consensus 160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence 998 456777777775 899999999998764322111111 1111 1222232 2788865544 668998
Q ss_pred EEeC----chhHHHhhcCCc-cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHH----HHHHHHHHH
Q 010842 326 WVKQ----PGLLVKALSTDP-EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS----HIRSDIRLA 396 (499)
Q Consensus 326 ~~r~----~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~----~~~~~~~~a 396 (499)
++.. ...+.+.+.... .+.... .. ....+...++...+....+.+ ......+..
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 302 (388)
T PRK08637 240 TFGTKAGSSQTVKEALEKKVKGLIRSN--------------IS---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERY 302 (388)
T ss_pred EEccccCCcHHHHHHHHHHHHHHhhcc--------------cC---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 8753 122222221100 000000 00 012234444444443333332 233344445
Q ss_pred HHHHHHHhcC---CCeEEEcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccC
Q 010842 397 KMFEGFVKSD---PRFEIVVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGA 471 (499)
Q Consensus 397 ~~l~~~L~~~---~~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~ 471 (499)
+.+.+.|++. +++.+. +|..+.+ ++++.+ ....++.+++. ++|+.+.. .+..++|++++.
T Consensus 303 ~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~~----------~~~~~l~~~l~~~~gv~~~~----~~~~~iRi~~~~ 367 (388)
T PRK08637 303 EKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLKG----------VDAEELRVHLLEKYGIGTIA----LNETDLRIAFSC 367 (388)
T ss_pred HHHHHHHHhhCCCCCcccc-cccceEEEEecCCh----------HHHHHHHHHHhhhcceEEEe----ccCCceEEEeec
Confidence 5566666554 246554 3444433 334431 12456777775 45654432 245679999963
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.++++..++.|.++.+.+
T Consensus 368 --~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 368 --VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred --CCHHHHHHHHHHHHHHHHhc
Confidence 57899999999999887654
No 270
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.69 E-value=2.7e-14 Score=145.64 Aligned_cols=320 Identities=15% Similarity=0.087 Sum_probs=197.9
Q ss_pred HHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 104 GFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 104 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
..+.+.+...... ....|....+..++.+++.+|+.+..+. ..+. -..++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~-----i~v~iT~Ga~~al~~~~~~l~~~---- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGR-----VATVQTPGGTGALRVGADFLKRA---- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe-----EEEEecCCccHHHHHHHHHHHHh----
Confidence 4566666666543 2335777778899999999988665432 2220 01378999999988877543210
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
.++..|+++++++..+..+++.+|+ +++.+|+...+++.+|+++|++.+.... ....+++.+.++||||
T Consensus 118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NPTG 186 (396)
T PRK09257 118 -----FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNPTG 186 (396)
T ss_pred -----CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence 1577899999999999999999999 9999998322247899999999886421 1124667788999999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchhh--hcCCCCCceeEecccccccC-CCcceEEEE--eCch
Q 010842 261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHY--LNGIERVDSFSFSPHKWLLS-YLDCCCLWV--KQPG 331 (499)
Q Consensus 261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~--r~~~ 331 (499)
.+ +.+++|+++|++|++|+++|.+|..+..... ..... +.+...--.++.+..|.++. ..-+|++++ .++.
T Consensus 187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~ 266 (396)
T PRK09257 187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH
Confidence 99 5578889999999999999999987542111 11111 11111112556889999986 577899874 3333
Q ss_pred hHHHh---hcC--CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHH
Q 010842 332 LLVKA---LST--DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 332 ~l~~~---~~~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~ 398 (499)
.+.+. +.. ...+... ..+...++...+. .+.+++..++..+.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 267 EADRVLSQLKATIRTNYSNP----------------------PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred HHHHHHHHHHHHhhhhcCCC----------------------cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 111 0111100 1122222222221 13345566677778888
Q ss_pred HHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842 399 FEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLT 474 (499)
Q Consensus 399 l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~ 474 (499)
+.+.|++.. ++.+. .|+.+.+.|--.+ .++.+++ .+.|+ ++.+. + |+++++ .
T Consensus 325 l~~~L~~~~~~~~~~~~-~p~gg~~~w~~l~-------------~~~~~~l~~~~~V-~~~p~---~----ri~~~~--~ 380 (396)
T PRK09257 325 LVEALKAKGPSRDFDFI-ARQRGMFSYSGLT-------------PEQVDRLREEFGV-YAVGS---G----RINVAG--L 380 (396)
T ss_pred HHHHHHhcCCCCCcccc-cccceEEEecCCC-------------HHHHHHHHHcCCE-EEcCC---C----eEEEee--C
Confidence 888888762 35443 4544444332111 1233444 44454 44331 2 999853 6
Q ss_pred cHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEG 489 (499)
Q Consensus 475 t~~di~~l~~~l~~~ 489 (499)
++++|++++++|+++
T Consensus 381 ~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 381 NESNIDYVAEAIAAV 395 (396)
T ss_pred CHHHHHHHHHHHHhh
Confidence 889999999999864
No 271
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.68 E-value=5.9e-15 Score=147.63 Aligned_cols=288 Identities=20% Similarity=0.238 Sum_probs=189.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|....+|+. ++++-|... .+++++|..|+..++.+... ++..|+++...+...
T Consensus 52 ~gnPt~~~le~~----la~Le~g~~---------a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t 107 (386)
T PF01053_consen 52 YGNPTVRALEQR----LAALEGGED---------ALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT 107 (386)
T ss_dssp TC-HHHHHHHHH----HHHHHT-SE---------EEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred cccccHHHHHHH----HHHhhcccc---------eeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence 456777888887 888887644 48889998888777776543 466788888877665
Q ss_pred HHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-
Q 010842 202 AKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG- 276 (499)
Q Consensus 202 ~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~- 276 (499)
.+.++ ..|+ ++.+++. -|+++|+++++++++ +|.+-.++||+..+-||++|+++||++|
T Consensus 108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~ 171 (386)
T PF01053_consen 108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD 171 (386)
T ss_dssp HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence 55444 4688 8877753 389999999988654 8999999999999999999999999999
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
++++||..++.....-| +-. +||.+..|..|++++..+ +|++.+++...+...+......
T Consensus 172 ~~~vVDnT~atp~~~~p----L~~---GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~----------- 233 (386)
T PF01053_consen 172 ILVVVDNTFATPYNQNP----LEL---GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRL----------- 233 (386)
T ss_dssp -EEEEECTTTHTTTC-G----GGG---T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHH-----------
T ss_pred ceEEeeccccceeeecc----CcC---CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhh-----------
Confidence 99999999988744322 222 399999999999986543 6777777633332222111111
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------Cc
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HF 417 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~ 417 (499)
.|-...+..+|..++ |.+.+..++++..++|..+.+.|+++|.++-+ .| | ..
T Consensus 234 ---------~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~g 302 (386)
T PF01053_consen 234 ---------LGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGG 302 (386)
T ss_dssp ---------HT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCT
T ss_pred ---------cCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccC
Confidence 111223566776666 55889999999999999999999999998743 33 1 24
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----C---EEEEeee-----E-------CC--EEEEEEeccCCCC
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----R---VYLTHTI-----V-------GG--LYMLRFAVGASLT 474 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~ 474 (499)
++++|.+... .+..+++.+.|.-- | . .+..+.. + .| ...+|+|++
T Consensus 303 gl~sf~l~~~--------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG---- 370 (386)
T PF01053_consen 303 GLLSFELKGG--------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG---- 370 (386)
T ss_dssp SEEEEEESSH--------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------
T ss_pred ceeEEEeccc--------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----
Confidence 6888988762 23456666666311 1 0 1111110 0 01 257999996
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGAD 491 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~ 491 (499)
-||++.+++.|+++.+
T Consensus 371 -lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 371 -LEDPDDLIADLEQALE 386 (386)
T ss_dssp -SS-HHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHhcC
Confidence 3678888888877653
No 272
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=7.5e-14 Score=139.13 Aligned_cols=278 Identities=13% Similarity=0.088 Sum_probs=176.2
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
++...++++ +++.+|.+.+ ..++|+|+++++...+.+. ++..|+++.+.|..+..+
T Consensus 55 ~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y~~~~~~ 110 (337)
T PRK03967 55 ITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTFGMYSFY 110 (337)
T ss_pred CCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCChHHHHHH
Confidence 455566665 6666677654 4688999998875443322 345688888899888888
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
++..|+ +++.|+.+. +|.+|+++|++.+. ++ .+++.+.++||||.+-+.++|.++++ +++++++|++
T Consensus 111 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~~------~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~ 177 (337)
T PRK03967 111 AKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-NA------SAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEA 177 (337)
T ss_pred HHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-CC------CEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECc
Confidence 899999 999999874 36899999987642 22 25667899999999999999999995 7999999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
|+.+. ...........++ -.++.++.|.++.| .-+|+++..+ ... +.+.......
T Consensus 178 y~~~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~~-~~i-~~~~~~~~~~------------------- 233 (337)
T PRK03967 178 YAEFS--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIANE-EII-DALYRIKPPF------------------- 233 (337)
T ss_pred hhhhc--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeecCH-HHH-HHHHhhcCCC-------------------
Confidence 97653 1111111111111 24567899999855 6688888743 322 2222111000
Q ss_pred CCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
....+...++...+. .+.+.+..++..+.++.+.+.|.+. ..++..+.+++.+ .+
T Consensus 234 ---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~----------------~~ 289 (337)
T PRK03967 234 ---SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL----------------DA 289 (337)
T ss_pred ---CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH----------------HH
Confidence 012334444443332 3445555566666677777777654 1234444343322 14
Q ss_pred HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+.|.++|..+ .+.......++|++++ +.++.++++++|+++.+.
T Consensus 290 ~~~l~~~gi~v-~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 290 YDYLLENGIVV-RKLSGRLEGHIRVTVG----KREENDEFIKALKEIKEG 334 (337)
T ss_pred HHHHHHCCEEE-EeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHh
Confidence 56777778544 3322223468999986 567888888888876553
No 273
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.68 E-value=2.4e-14 Score=136.85 Aligned_cols=324 Identities=14% Similarity=0.062 Sum_probs=217.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
...+...+.+++.+.|.+.-|-+..+.. ...++++|+|.||-+.+.+..+ |+...+++.+.+..+.
T Consensus 119 dy~Gl~~frqa~A~Fm~~~r~~~v~fdP---~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfd 184 (471)
T KOG0256|consen 119 DYHGLPSFRQAVAEFMERARGNRVKFDP---ERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFD 184 (471)
T ss_pred cccCchHHHHHHHHHHHHHhCCCCccCc---cceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCccc
Confidence 3456778899988888888776433211 1468999999988766665533 7888899988888887
Q ss_pred HHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCE
Q 010842 203 KVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~ 278 (499)
.-++ ..|+ +++.|.+...++|++++++||+++.+.++.+.+.-.|+++.|+||.|.+- .|..+..+|.++++.
T Consensus 185 rdl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniH 261 (471)
T KOG0256|consen 185 RDLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIH 261 (471)
T ss_pred ccceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceE
Confidence 7665 4688 99999998777799999999999999999999999999999999999994 466777778999999
Q ss_pred EEeeccccchhccCccchhhhcC---CC-CCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNG---IE-RVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g---~~-~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
+++|..|++..+..+++...+.- .+ .-| -|.++..|-++.| .-.|+++..++.....+-....-++.
T Consensus 262 vI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~v------ 335 (471)
T KOG0256|consen 262 VISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLV------ 335 (471)
T ss_pred EEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCC------
Confidence 99999999988766665543221 11 223 4678889999988 55899998887654332222111111
Q ss_pred CCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 426 (499)
.....++....+. .+-+++.-+|....-+++.+.|+++ |+..+ +...+++||.--.
T Consensus 336 -----------------Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr 396 (471)
T KOG0256|consen 336 -----------------SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLR 396 (471)
T ss_pred -----------------cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhH
Confidence 1222233333332 2334444455555667888888887 77766 4566777764211
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.- .+... -+--..|.+++...-++.++|+. ....+|+|+|+.| +.++.++-.+++|+.+...
T Consensus 397 ~l-L~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 397 KL-LTSLT-FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred Hh-cCcCC-hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence 10 01000 01112344555554233445433 3456899999964 5666677788888888764
No 274
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=5.8e-14 Score=139.70 Aligned_cols=277 Identities=13% Similarity=0.078 Sum_probs=180.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
+...++.+++.+|+.+.. .+++ ..++|+|+++++..++.+. + .|++..++|..+..+
T Consensus 56 ~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-d--------------~v~v~~P~y~~~~~~ 112 (335)
T PRK14808 56 SPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-D--------------RSVFFPPTYSCYRIF 112 (335)
T ss_pred CChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh-C--------------cEEECCCCHHHHHHH
Confidence 456677777555554432 5443 4689999999888777644 1 267788999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
++.+|+ +++.+|.+++ +.++... +. ...+|+.+.++||||.+-+.+++.+++ ++++|+++|.+
T Consensus 113 ~~~~g~---~~~~v~~~~~--~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~ 175 (335)
T PRK14808 113 AKAVGA---KFLEVPLTKD--LRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEA 175 (335)
T ss_pred HHHcCC---eEEEecCCCc--CCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECc
Confidence 999999 9999998754 4555332 11 123788899999999999999999998 58999999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
|..+. ...........+ --.++.+..|.++.| .-+|+++... +.. +.+...... ..
T Consensus 176 Y~~f~--~~~~~~~~~~~~-~vi~~~S~SK~~~l~GlRvG~~v~~~-~~~-~~l~~~~~~-~~----------------- 232 (335)
T PRK14808 176 YYEFH--GESYVDLLKKYE-NLAVIRTFSKAFSLAAQRIGYVVSSE-KFI-DAYNRVRLP-FN----------------- 232 (335)
T ss_pred hhhhc--CCchHHHHHhCC-CEEEEEechhhccCcccceEEEEeCH-HHH-HHHHHhcCC-CC-----------------
Confidence 97652 111112222221 124567789999854 6688888754 322 333211100 00
Q ss_pred CCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 364 TGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
...+..+++...+ ..+.+.+..+...+.++++.+.|++. ++++. ++..+.+.+++.... ..++
T Consensus 233 ----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~~----------~~~~ 296 (335)
T PRK14808 233 ----VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKEE----------KERL 296 (335)
T ss_pred ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCcc----------HHHH
Confidence 0122223332222 22345666667677778888999887 67765 556677766664321 2567
Q ss_pred HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.++|.++|+.+. . +. .++|++++ +.++.++++++|+++
T Consensus 297 ~~~l~~~Gi~V~-~--~~--~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 297 LEHLRAKNIAVR-S--FR--EGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred HHHHHHCCeEEE-E--CC--CCeEEecC----CHHHHHHHHHHHHhh
Confidence 788888886543 2 22 46999986 578899999998753
No 275
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=3.3e-13 Score=137.90 Aligned_cols=301 Identities=12% Similarity=0.099 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCC-chhHHHHHHH
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQT-HSTFAKVCKL 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~-H~s~~ka~~~ 207 (499)
..++.+.+++++|.+. .+++++|++||..|+..+|...... .|. .+.+|+..+.. |-+...++.+
T Consensus 81 ~~~l~~~l~~~~~~~~---------~~~~~SGs~A~e~ai~~a~~~~~~~---~~~~~~~~~i~~~~~~yhg~~~~~~~~ 148 (401)
T TIGR01885 81 FGEFAEYVTKLFGYDK---------VLPMNTGAEAVETAIKLARKWGYKV---KGIPENQAIIVSAKGNFHGRTLGAISM 148 (401)
T ss_pred HHHHHHHHHhhcCCCE---------EEEeCccHHHHHHHHHHHHHHhhhh---cCCCCCCCEEEEECCCcCcccHHHHhC
Confidence 3444445888888654 3899999999999999998753211 111 24456655555 5565555555
Q ss_pred hCC-------CC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842 208 AGV-------SP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE 274 (499)
Q Consensus 208 ~G~-------g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~ 274 (499)
.|- |. ..+..+|. -|+++|++.+++. +....+|++....+++|.+-| +++|.++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 431 10 12333332 2789999988642 223445666666677899877 9999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
||+++++|++|.++......+.....++ ..|.++++ |.++.. ...|+++.+. + +.+.+... +..
T Consensus 219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~~-~-i~~~~~~~--~~~-------- 283 (401)
T TIGR01885 219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLADD-D-VMLTIKPG--EHG-------- 283 (401)
T ss_pred cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEcH-H-HHhhccCC--CCC--------
Confidence 9999999999865322111111111233 36888875 988754 3567776653 2 22322210 000
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~ 431 (499)
.+. .+.+.....+..+++.+..+. ..++..++++++.+.|++++ ..++. .+...++.+.+....
T Consensus 284 ------~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~--- 349 (401)
T TIGR01885 284 ------STY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK--- 349 (401)
T ss_pred ------CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc---
Confidence 011 122222333444555543333 44567778899999998873 22221 223334444443221
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
......++.++|.++|..+ .+. +...+|+++. ..+|++||++++++|.++.
T Consensus 350 ---~~~~~~~l~~~l~~~Gv~v-~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 350 ---TGRTAWDLCLKLKEKGLLA-KPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ---chhHHHHHHHHHHhCCEEE-Eec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 0123567888888888543 332 3457999984 7899999999999998764
No 276
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.4e-13 Score=136.61 Aligned_cols=289 Identities=16% Similarity=0.088 Sum_probs=198.7
Q ss_pred hhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 126 ASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
...+++++ +++.+| .+.+ ..++.+|+++.+...+.+.+. ++..|+++.+++..+...
T Consensus 58 ~~~~l~~a----~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~ 115 (356)
T COG0079 58 DYRELRAA----LAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIA 115 (356)
T ss_pred cHHHHHHH----HHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHH
Confidence 34555555 888888 5544 235567777766655555543 456788899999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD 282 (499)
++..|. +++.||.++ |.+|++.+.+.+.++++ +|+++.|+||||..-+.++|.++++.. +.+++||
T Consensus 116 a~~~g~---~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvD 183 (356)
T COG0079 116 AQLAGA---EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVID 183 (356)
T ss_pred HHhcCC---eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEe
Confidence 999999 999999874 79999999999987443 899999999999998888888887754 7899999
Q ss_pred ccccchhccCccchhhhcCCCCCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 283 AAYAGSACICPEFRHYLNGIERVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
+||.-+.- +....++. .-+ .+.=+..|.++.+ .-+|+. +.+++.........++|-.
T Consensus 184 EAY~eF~~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy~-ia~~~~i~~l~~vr~p~~v-------------- 243 (356)
T COG0079 184 EAYIEFSP--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGYA-IANPELIAALNKVRPPFNV-------------- 243 (356)
T ss_pred CchhhcCC--chhhhhcc---CCCCEEEEEecHHhhhcchhceeec-cCCHHHHHHHHHhcCCCCC--------------
Confidence 99977643 22111111 123 4556678977655 557874 4455444333333333311
Q ss_pred cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
..+...++...+. .+.+++.+++..+.++++.+.|++++ +.-+.++..|.+.++... . .
T Consensus 244 ---------~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~-~--------~- 303 (356)
T COG0079 244 ---------SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPD-A--------E- 303 (356)
T ss_pred ---------CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCC-c--------c-
Confidence 2344445555442 25678888888899999999999986 553335667777777643 1 2
Q ss_pred HHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 439 ~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...+.+.|.++|+++-.... .....++|+++. |+++-++++++|+++.+.
T Consensus 304 ~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 304 AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 34677888888865443323 123468999996 677779999999987653
No 277
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.67 E-value=1.3e-13 Score=140.24 Aligned_cols=293 Identities=13% Similarity=0.087 Sum_probs=162.6
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCC-CCchhHHHHHHHhC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSD-QTHSTFAKVCKLAG 209 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~-~~H~s~~ka~~~~G 209 (499)
.++.+.|+++.+.+. .++++|||+||..|+.++|.....+ |. .+..|++.+ ..|.+..-+....|
T Consensus 76 ~~la~~l~~~~~~~~---------v~~~~sGseA~~~al~~ar~~~~~~----G~~~r~~vi~~~~~yhg~~~~~~~~~~ 142 (389)
T PRK01278 76 ERLAERLVENSFADK---------VFFTNSGAEAVECAIKTARRYHYGK----GHPERYRIITFEGAFHGRTLATIAAGG 142 (389)
T ss_pred HHHHHHHHhhCCCCE---------EEEcCCcHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCCcHHHHhccC
Confidence 334455777765432 4999999999999999998653221 21 223444444 44555444433333
Q ss_pred CCCCCeEE---eeCCCCCCCc----cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCE
Q 010842 210 VSPANIRA---LPTSVDANFS----LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIW 278 (499)
Q Consensus 210 ~g~~~v~~---v~~~~~~~~~----~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~ 278 (499)
. .... .|... ++. .|+++|++.++++ +.+|++....+++|.+ +.+++|.++|++||++
T Consensus 143 ~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~ 211 (389)
T PRK01278 143 Q---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLL 211 (389)
T ss_pred C---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 2 1111 11111 112 5899999988643 3466666666666733 5799999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+++|++|.++.....-+.....++. .|.+++ .|.++..+..|+++.+++ +.+.+.... . ..
T Consensus 212 lI~DEv~~g~g~~g~~~~~~~~~~~-pdi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~~----~----------~~ 272 (389)
T PRK01278 212 LIFDEVQCGMGRTGKLFAHEWAGVT-PDIMAV--AKGIGGGFPLGACLATEE--AAKGMTPGT----H----------GS 272 (389)
T ss_pred EEEeccccCCCcCCcceeecccCCC-CCEEEE--ehhccCCcceEEEEEcHH--HHhccCCCC----C----------CC
Confidence 9999999875322111111112332 565554 688875566888877653 222221100 0 00
Q ss_pred CcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCC
Q 010842 359 DWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~ 431 (499)
+. + ...+...++ ++.+-.+ +..++..++.+++.+.|++ .|++-....+....+.+.+...
T Consensus 273 --t~-~---~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~---- 339 (389)
T PRK01278 273 --TY-G---GNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP---- 339 (389)
T ss_pred --CC-C---ccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC----
Confidence 00 1 123444444 4433222 2334445555555555543 3322111122223333444221
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
..++.++|.++|..+... +..++|+++. ...++++|++++++|.++.++
T Consensus 340 -------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 340 -------NRDLVQALRDEGLLTVGA----GDNVVRLLPP-LIITEEEIDEALERLERAAES 388 (389)
T ss_pred -------HHHHHHHHHHCCeEEeec----CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 456778888888654332 3467999973 557899999999999988764
No 278
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.66 E-value=4.5e-14 Score=133.73 Aligned_cols=307 Identities=14% Similarity=0.181 Sum_probs=194.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH- 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H- 198 (499)
.-...|-...+|++ ++.|=|-- +++-+++|..|..+|+..... .++.|+.+..-+
T Consensus 57 sRi~NPT~~vlE~R----iAaLEGG~---------aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYG 112 (426)
T COG2873 57 TRIMNPTTDVLEER----IAALEGGV---------AALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYG 112 (426)
T ss_pred eeccCchHHHHHHH----HHHhhcch---------hhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccC
Confidence 33466888889998 66664432 347788899999988876543 456666554433
Q ss_pred ---hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 199 ---STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 199 ---~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
.-+....+.+|+ ++++|+.+ |++.++++|+++++ +|.+-.-.||-+.+-|+++|+++||++
T Consensus 113 GT~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~ 176 (426)
T COG2873 113 GTYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRH 176 (426)
T ss_pred chHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHc
Confidence 335566788999 99999743 79999999999998 677777778999999999999999999
Q ss_pred CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCch-hHHHhhcCCccCCCCCCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPG-LLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
|++++||..++..+++-| .. . +||.++-|..||+++. ...|.+++-... .... ...-+.+........+
T Consensus 177 gvpliVDNT~atpyl~rP-~~---h---GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~--~~rfP~~~~p~p~YhG 247 (426)
T COG2873 177 GVPLIVDNTFATPYLCRP-IE---H---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTA--NGRFPEFTTPDPSYHG 247 (426)
T ss_pred CCcEEEecCCCcceecch-hh---c---CCCEEEEeecccccCCccccceEEEeCCcccccc--CCCCcccCCCCccccc
Confidence 999999999988743322 22 2 4999999999999765 334555553321 1110 1111111111111100
Q ss_pred cccCCC-cc---------cCCCCCC----CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----
Q 010842 354 VVDFKD-WQ---------VGTGRRF----KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR---- 415 (499)
Q Consensus 354 ~~~~~~-~~---------~~~sr~~----~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---- 415 (499)
. .+.+ ++ .++-|.. .+...|..+ .|.|-+.-+++|++++|..+.+.|+++|.+.-++-|
T Consensus 248 l-~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~l--qGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~ 324 (426)
T COG2873 248 L-VYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLL--QGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLAS 324 (426)
T ss_pred e-ehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHH--hchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCC
Confidence 0 0000 00 0111211 223344433 367889999999999999999999999988765421
Q ss_pred --------------CceEEEEEecCCCCCCcchhHHHHHHHHHHH------HhcCC---EEEEee--eE---C-------
Q 010842 416 --------------HFALVCFRLNPYPHSGSADTEMLNRKLLDWV------NSTGR---VYLTHT--IV---G------- 460 (499)
Q Consensus 416 --------------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l------~~~g~---~~~~~~--~~---~------- 460 (499)
...+++|.+++.. +..+++.+.| ..-|. .++.|. .. .
T Consensus 325 ~~~h~la~kyl~~g~g~vltF~~kgg~--------ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~a 396 (426)
T COG2873 325 HPYHALAKKYLPKGAGAVLTFGVKGGY--------EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAA 396 (426)
T ss_pred CcchhHHHhhccCCCceEEEEEecChH--------HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhc
Confidence 2356778776531 2233333322 11121 333321 11 0
Q ss_pred --CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 461 --GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 461 --g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
....+|+|++ -||++.++..|++..+
T Consensus 397 Gv~~~~IRlSVG-----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 397 GVTPDLIRLSVG-----IEDIDDIIADLEQALE 424 (426)
T ss_pred CCCCCcEEEEec-----cCCHHHHHHHHHHHHh
Confidence 2467999996 4688888888888654
No 279
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.66 E-value=1.9e-14 Score=142.78 Aligned_cols=307 Identities=13% Similarity=0.117 Sum_probs=180.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCC
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQT 197 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~ 197 (499)
|.......++|.-+.+.++++||.++..|+ --+=..|||.||+.++.+..+ ++..|+. +...
T Consensus 58 y~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~An~av~~aLl~-----------pGD~Im~l~l~~GG 122 (399)
T PF00464_consen 58 YGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQANLAVYMALLK-----------PGDTIMGLSLPHGG 122 (399)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHHHHHHHHHHHT------------TT-EEEEEEGGGT-
T ss_pred ccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchHHHHHHHHHHHh-----------hcCcEEecChhhcc
Confidence 344567789999999999999999744321 124466899999888777654 4555543 3445
Q ss_pred chhHHHHHHH-------hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842 198 HSTFAKVCKL-------AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE 270 (499)
Q Consensus 198 H~s~~ka~~~-------~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ 270 (499)
|.|....... ... +++.+++|++ ++.+|.+++++.+.+.+ |-+|++-.- .+--.-|++++.+
T Consensus 123 Hlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~~~a~~~k-----PklIi~G~S--~y~~~~d~~~~re 191 (399)
T PF00464_consen 123 HLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELEKLAKEHK-----PKLIICGAS--SYPRPIDFKRFRE 191 (399)
T ss_dssp -GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-S--STSS---HHHHHH
T ss_pred cccccccccccccccccceE---EEEeeeeecC-CCeECHHHHHHHHhhcC-----CCEEEECch--hccCccCHHHHHH
Confidence 6664433222 334 6777888864 47999999999998753 556655543 3445578999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe-------------CchhHHHhh
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK-------------QPGLLVKAL 337 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r-------------~~~~l~~~~ 337 (499)
||++.|.+|++|++|-.+.+....+... ++.||+++.+.||.|.+|. +|+++++ +.+ +.+.+
T Consensus 192 Iad~vga~l~~D~sH~~GLIa~g~~~~P---~~~ADvvt~sThKtl~GPr-ggiI~~~~~~~~~~~~~~~~~~~-l~~~I 266 (399)
T PF00464_consen 192 IADEVGAYLMADISHIAGLIAGGLFPNP---FPYADVVTGSTHKTLRGPR-GGIILTNKGSKNVDKKGKEIDEE-LAEKI 266 (399)
T ss_dssp HHHHTT-EEEEE-TTTHHHHHTTSS--G---CCTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHH-HHHHH
T ss_pred HHHhcCcEEEecccccccceehheecCc---cccceEEEeeccccccccC-ceEEEEcCCccccCCcccccHHH-HHHHh
Confidence 9999999999999997776655444433 3459999999999999995 5888887 222 22222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR 415 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~ 415 (499)
... ++. +.+++-... ..++..+++......++++.++..++|+.|.+.|.+. |++++. .+
T Consensus 267 ~~a---vfP--------------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggT 328 (399)
T PF00464_consen 267 DSA---VFP--------------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGT 328 (399)
T ss_dssp HHH---HTT--------------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-
T ss_pred ccc---cCC--------------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCC
Confidence 110 111 111121111 2344555655555667899999999999999999997 999985 46
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--C----CEEEEEEecc---CCCCcHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--G----GLYMLRFAVG---ASLTDERHVVAAWEL 485 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~----g~~~lRi~~~---~~~~t~~di~~l~~~ 485 (499)
+.+.|.+.+.+.+ + ..++..+.|.+.|+.+ ....+ + ....+|+... .-...++|++++.+.
T Consensus 329 d~H~vlvd~~~~~------~--~g~~a~~~Le~~gI~v-nkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 329 DNHQVLVDLRSFG------I--DGKEAEKALEEAGIIV-NKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp SSSEEEEEGGGGT------S---HHHHHHHHHHTTEE--EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCeEEEEecccc------c--chHHHHHHHHhcCeee-cccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 6777877775432 1 1344455566667543 22211 1 1246999872 123356777776654
No 280
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=7.8e-14 Score=141.41 Aligned_cols=298 Identities=12% Similarity=0.053 Sum_probs=170.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
..+++.++.+++++..+.+. .++++||++||..|+..++... | ++.+|......|-+..-+..
T Consensus 69 ~~~~~~~la~~l~~~~~~~~---------~~~~~sG~~a~~~A~~~a~~~~-------g-~~~vi~~~~~~Hg~~~~~~~ 131 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGDL---------VFFCNSGAEANEAALKLARKHT-------G-KSKIVTFEQSFHGRTFGTMS 131 (377)
T ss_pred CCHHHHHHHHHHHhcCCCCE---------EEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCCcHHhhh
Confidence 45677887788888766432 4899999999999999887531 1 23345545566766655555
Q ss_pred HhCCCCCCeEEeeCCCCCCC--ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHHHHHhCCEEE
Q 010842 207 LAGVSPANIRALPTSVDANF--SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEVANEYGIWVH 280 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~ia~~~~~~lh 280 (499)
..|.....-...|...+-.+ .-|+++|++.+.+++ .+|++....++.|.+. .+++|.++|++||++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI 205 (377)
T PRK02936 132 ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLI 205 (377)
T ss_pred ccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 44321000001111110000 117899998886433 3666666666666663 39999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
+|.+|.++......+.....++ ..|.++ ..|.++..+..|+++.+++ +.+.+... . .
T Consensus 206 ~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~~--~~~~~~~~---~-~-------------- 262 (377)
T PRK02936 206 IDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKKE--LGTAFGPG---S-H-------------- 262 (377)
T ss_pred EeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEcHH--HHhhccCC---C-C--------------
Confidence 9999976432111101011232 246655 5899885556787776532 32332210 0 0
Q ss_pred ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
+ .+.....+...+++..+..-..++.+++..++.+++++.|++ .+.+..+ .+...++.+.+.+.
T Consensus 263 ~--~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~--------- 330 (377)
T PRK02936 263 G--STFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTEE--------- 330 (377)
T ss_pred C--CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecch---------
Confidence 0 000112344444444432111234455666666677666655 3333222 12334555555321
Q ss_pred HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...+.+.+.++|.++.. .+..++|+++. ...++++|++++++|.++
T Consensus 331 --~~~~~~~l~~~gv~v~~----~g~~~lRi~p~-~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 331 --VAPVIEQLREEGLLVLS----AGPNVIRLLPP-LVVTKEELDQAVYLLKKV 376 (377)
T ss_pred --HHHHHHHHHHCCeEEec----CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 45677778888865433 23467999973 668999999999999765
No 281
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.66 E-value=3.6e-14 Score=134.80 Aligned_cols=299 Identities=15% Similarity=0.126 Sum_probs=205.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
-...||++ |++|-+-+.. ++.+++-.||-..|...-.. +|+.+||-.+..|.|+...+
T Consensus 217 ~hv~LE~e----LA~LHqK~aA---------LlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GI 274 (570)
T KOG1360|consen 217 HHVRLEAE----LADLHQKEAA---------LLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGI 274 (570)
T ss_pred hhhhHHHH----HHHHhcCcce---------eeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHh
Confidence 34566766 9999876654 55555555665555443222 37888998888899999998
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+..++ .-.... .-|+++|++.++.-. ...|.+|.+-...+..|++-||+||++++++||..-.+|.+|
T Consensus 275 rns~v---~K~IFr-------HND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVH 342 (570)
T KOG1360|consen 275 RNSRV---PKHIFR-------HNDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVH 342 (570)
T ss_pred hhcCC---cceeec-------cCCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhh
Confidence 88887 333333 349999999998743 357889999999999999999999999999999999999998
Q ss_pred cchhccCccchhh--hcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcc
Q 010842 286 AGSACICPEFRHY--LNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 286 g~~~~~~~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
+-+.+ .|..... .+| +.+.|.|+...-|.++.- .|.+.. ...+...+ +..+++++...-
T Consensus 343 AVGlY-G~rGaGvgerdGvm~kvDiIsGTLgKafGcV--GGYIAa--t~~LvDmiRSyAaGFIFTTSL------------ 405 (570)
T KOG1360|consen 343 AVGLY-GPRGAGVGERDGVMHKVDIISGTLGKAFGCV--GGYIAA--TRKLVDMIRSYAAGFIFTTSL------------ 405 (570)
T ss_pred hhccc-cCCCCCccccCCcchhhhhcccchhhhcccc--cceehh--hhhHHHHHHHhcCceEEecCC------------
Confidence 76543 2211110 123 456999999998987643 233332 22233333 445666665421
Q ss_pred cCCCCCCCc-HHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 362 VGTGRRFKS-LRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 362 ~~~sr~~~a-l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
+... ..+..+.+.+ +.+| +...+...++.+|+++.|.+. |+.++..| +.++..++.+ ..++
T Consensus 406 -----PP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgd---------a~l~ 468 (570)
T KOG1360|consen 406 -----PPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGD---------AALA 468 (570)
T ss_pred -----ChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccC---------HHHH
Confidence 1111 1223344443 3344 334455667788999999887 88877444 4788887755 3567
Q ss_pred HHHHHHHHhcCCEEEE----eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLT----HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~----~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++++.|+.+..+|+. |+...|...+|++.+ |..|.+-++.+++++..+-+++
T Consensus 469 ~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 469 KQASDILISKHNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHhcCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 8888888877777764 566678888999996 8899999999999998876553
No 282
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.65 E-value=3.3e-13 Score=137.89 Aligned_cols=298 Identities=13% Similarity=0.121 Sum_probs=170.9
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhC--
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAG-- 209 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G-- 209 (499)
++.+.|+++.+.+. .+++++|++||..|+..+|...... .+. ++.+|......|-+...+..+.|
T Consensus 86 ~l~~~l~~~~~~~~---------~~~~~sGseA~e~a~klar~~~~~~---~~~~~~~ii~~~~~~HG~~~~~~~~~~~~ 153 (403)
T PRK05093 86 RLAKKLIDATFAER---------VFFANSGAEANEAAFKLARRYACDR---HGPEKTEIIAFHNSFHGRTLFTVSVGGQP 153 (403)
T ss_pred HHHHHHHhhCCCCE---------EEEeCchHHHHHHHHHHHHHHHhhc---CCCCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence 44455777776543 3899999999999999998754211 011 34456666667877665444322
Q ss_pred -----CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC----hhHHHHHHHHhCC
Q 010842 210 -----VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN----VEPLAEVANEYGI 277 (499)
Q Consensus 210 -----~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~----l~~I~~ia~~~~~ 277 (499)
++. ..++.+|. -|++++++.+.++ +.+|++. +.+++|.+ .| +++|.++|++||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~ 219 (403)
T PRK05093 154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNA 219 (403)
T ss_pred hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 211 12333332 2789999888543 3355555 55555544 33 9999999999999
Q ss_pred EEEeeccccchhccCccchh-hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 278 WVHVDAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++++|.+|.++... ..... ...++ ..|..++ -|.++..+..|+++.++. +.+.+... ...
T Consensus 220 ~lI~DEv~~g~g~~-g~~~~~~~~~~-~pdi~s~--sK~l~~G~rig~vv~~~~--i~~~l~~~---~~~---------- 280 (403)
T PRK05093 220 LLIFDEVQTGMGRT-GDLFAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTAE--IASHFKVG---THG---------- 280 (403)
T ss_pred EEEEechhhCCCCC-ccchhhhhcCC-CCCEEEe--cccccCCcceEEEEEcHH--HHhhcCCC---CCC----------
Confidence 99999999865322 11111 11222 2565554 598875566888887653 22222210 000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC-C-CceEEEEEecCCCCCCcc
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP-R-HFALVCFRLNPYPHSGSA 433 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~-~~~~v~f~~~~~~~~~~~ 433 (499)
.+. ....+..++++..+-.-.-.+..++..++.+++.+.|+++. .+.++.. + ....+.+.+.+..
T Consensus 281 ---~t~----~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~----- 348 (403)
T PRK05093 281 ---STY----GGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY----- 348 (403)
T ss_pred ---CCC----CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc-----
Confidence 000 11223333333322111112445667777888888887651 1111111 1 2233444443310
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.....++..++.++|..+. + .+..++|+++. ...++++|++++++|.++..++.
T Consensus 349 --~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~~ 402 (403)
T PRK05093 349 --KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKVV 402 (403)
T ss_pred --hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 1235678888888885543 2 23467999884 66789999999999999887653
No 283
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=1.6e-13 Score=140.07 Aligned_cols=303 Identities=14% Similarity=0.128 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~~ 206 (499)
.....++.++++++.|.+. .++++||++|+..++.+++....+ .+..+..|++. ...|.....+..
T Consensus 80 ~~~~~~la~~l~~~~~~~~---------v~~~~gg~eA~~~al~~a~~~~~~----~~~~~~~ii~~~~~yhg~~~~~~~ 146 (396)
T PRK02627 80 IEPQEELAEKLVELSGMDK---------VFFCNSGAEANEAAIKLARKYGHK----KGIEKPEIITAENSFHGRTLATLS 146 (396)
T ss_pred CHHHHHHHHHHHhhcCCCE---------EEECCCcHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCcCcccHHHHH
Confidence 4566677777888887643 499999999999999988764211 01112334444 444544333333
Q ss_pred HhCCCCCCeEEeeCCCCCCC----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCE
Q 010842 207 LAGVSPANIRALPTSVDANF----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIW 278 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~ 278 (499)
..+.........|... + + ..|+++|++++.++ +.+|++....+++|.. +.+++|.++|++||++
T Consensus 147 ~~~~~~~~~~~~~~~~-~-~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 218 (396)
T PRK02627 147 ATGQPKYQEGFEPLVE-G-FIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGIL 218 (396)
T ss_pred hcCCccccccCCCCCC-C-ceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3332000001122211 1 1 22899999988432 3467776667777743 3489999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+++|++|+++............++ ..|.+++ -|.++..+..|+++.+++ +.+.+... ... .
T Consensus 219 lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~~~~G~rig~~~~~~~--~~~~~~~~----~~~----------~ 279 (396)
T PRK02627 219 LILDEVQTGMGRTGKLFAYQHYGI-EPDIMTL--AKGLGGGVPIGAVLAKEK--VADVFTPG----DHG----------S 279 (396)
T ss_pred EEEechhcCCCccCceeeehhcCC-CCCEEEE--cchhhCCcccEEEEEcHH--HHhccCCC----CCC----------C
Confidence 999999986532111011111232 2566665 588886567888887643 22222110 000 0
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcch
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~ 434 (499)
.+ + ...+...+++..+..-.-++..++..++.+++.+.|.+ .|.+..+ ......+.+.+.. .
T Consensus 280 t~---~---~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~-~------ 345 (396)
T PRK02627 280 TF---G---GNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDR-P------ 345 (396)
T ss_pred CC---C---CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecC-c------
Confidence 00 1 12333344333331111123445555566666665544 3322222 2233455555521 1
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..++.+++.++|..+ .+. +..++|+++. ...++++|++++++|.++.+++
T Consensus 346 ----~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 346 ----AAEIVKKALEKGLLI-NVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ----HHHHHHHHHHCCeEE-eec---CCCEEEEECC-cccCHHHHHHHHHHHHHHHHhh
Confidence 456788888888554 332 2356999873 5679999999999999987765
No 284
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.65 E-value=1.4e-14 Score=140.59 Aligned_cols=314 Identities=16% Similarity=0.109 Sum_probs=201.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
....+-..++..+-+..|++... ..++++.+| +++.+++.+.|.+ + ....|+.|...|+|-.|+
T Consensus 53 ~~~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~ka 117 (389)
T PF05889_consen 53 LLAKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKA 117 (389)
T ss_dssp HHHHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHH
Confidence 33455666666677889998542 457777777 7777778777722 1 223466689999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCC-CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDA-NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD 282 (499)
+...|+ +++.||...++ ....|.+.+++.+++. |..+.+++.|+.+-..|.. |++++|+++|++||++++|.
T Consensus 118 i~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN 191 (389)
T PF05889_consen 118 IERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN 191 (389)
T ss_dssp HHHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE
T ss_pred HHhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc
Confidence 999999 99999964322 3577899999998543 5567788888877777777 55999999999999999999
Q ss_pred ccccchhccCccchhhh---cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 283 AAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
+|||.-.- ...+++ ....+.|.++-+.-|-|.+|.|.+++...++..+...-. .|-
T Consensus 192 nAYgvQ~~---~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~Yp--------------- 250 (389)
T PF05889_consen 192 NAYGVQSS---KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYP--------------- 250 (389)
T ss_dssp GTTTTT-H---HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSH---------------
T ss_pred cchhhhHH---HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhh---------------
Confidence 99987321 122211 123479999999999999999999998887654432211 121
Q ss_pred cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCce-EEEEEecCCCCCCcc
Q 010842 360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFA-LVCFRLNPYPHSGSA 433 (499)
Q Consensus 360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~-~v~f~~~~~~~~~~~ 433 (499)
+|-+ ..+.+...+..+|..|+...+....+.-.++.++|++.. +-.++..|... .+.|..........
T Consensus 251 -----GRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~- 324 (389)
T PF05889_consen 251 -----GRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQ- 324 (389)
T ss_dssp -----SHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS-
T ss_pred -----hhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhcc-
Confidence 1112 236678889999999999999999999988888887531 33444334322 24444433211011
Q ss_pred hhHHHHHHHHHHHHhcCC---EEEEeeeECC--------EEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGR---VYLTHTIVGG--------LYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~---~~~~~~~~~g--------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.....|...|..+|+ -.+.+..-.. ..+|-++.+ ..++++|||.++++|+++.+
T Consensus 325 ---k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~Asa-iG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 325 ---KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASA-IGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ---SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHHH
T ss_pred ---chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHH-hCCCHHHHHHHHHHHHHHhC
Confidence 112345566666662 1111110111 156777553 67999999999999998864
No 285
>PLN02397 aspartate transaminase
Probab=99.65 E-value=2.5e-13 Score=139.44 Aligned_cols=321 Identities=12% Similarity=0.053 Sum_probs=193.0
Q ss_pred HHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCCh--HHHHHHHHHHHHHHHHh
Q 010842 105 FLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTT--SDSILVTLIAARDRALD 179 (499)
Q Consensus 105 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~gg--t~A~~~al~~ar~~~~~ 179 (499)
.+.+.+...++.+ ...|....+..++.+++.+|+.+..+.+ +... ...-+.+| +.+++.++.+..+
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i-----~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRV-----ATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCee-----EeeecccchHHHHHHHHHHHHhC----
Confidence 3444443333333 3368888899999999888885543221 1100 00112233 3334444443321
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++..|+++++++..+...++..|. +++.+|.....++.+|++.+++.+.+. ..+..+++.+.++|||
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence 567899999999999999999999 999999832224799999999887542 1124577888899999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchh--hhcCCCCCceeEecccccccC-CCcceEEE--EeC
Q 010842 260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRH--YLNGIERVDSFSFSPHKWLLS-YLDCCCLW--VKQ 329 (499)
Q Consensus 260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~--~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~--~r~ 329 (499)
|.+ +.+++|+++|++||+|+++|.+|..+..... .... .......--.++.+..|.++. ..-+|+++ ..+
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~ 287 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKS 287 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCC
Confidence 999 5577889999999999999999987753110 0111 111111112445678999985 46688875 333
Q ss_pred chhHHH---hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 010842 330 PGLLVK---ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKM 398 (499)
Q Consensus 330 ~~~l~~---~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~ 398 (499)
+..+.. .+......... + ...+..+++...+.. +.++++.++..+.++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~-----------------~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~ 347 (423)
T PLN02397 288 ADVAVRVKSQLKLIARPMYS-----------------N---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQK 347 (423)
T ss_pred HHHHHHHHHHHHHHHhcccC-----------------C---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211 11110000000 0 012333444333321 1256667788888999
Q ss_pred HHHHHhcCCC----eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842 399 FEGFVKSDPR----FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT 474 (499)
Q Consensus 399 l~~~L~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~ 474 (499)
+.+.|+++ + ++++ .|+.+.+.|--.+ ..++++|.++..+++.+ ++ |+++++ .
T Consensus 348 l~~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~---~~----Ri~~~~--~ 403 (423)
T PLN02397 348 LYDALEAR-GSPGDWSHI-TKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTR---DG----RISMAG--L 403 (423)
T ss_pred HHHHHHhc-CCCCCCCcc-cCCceEEEecCCC-------------HHHHHHHHHhCCEEECC---CC----eEEEee--C
Confidence 99999987 4 5544 4555555542111 23556665554444432 12 999853 7
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGAD 491 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~ 491 (499)
++++|++++++|+++..
T Consensus 404 ~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 404 SSKNVPYLADAIHAVVT 420 (423)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 88999999999999864
No 286
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=3.7e-14 Score=135.80 Aligned_cols=314 Identities=13% Similarity=0.097 Sum_probs=203.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCC
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQ 196 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~ 196 (499)
.|....-..++|..+++...++||.+... +-..||+.||+.+..+..+ ++..|+. +..
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~an--------VQPhSGs~AN~av~~All~-----------pGDtimgm~l~~G 123 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYAN--------VQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHG 123 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCccc--------cCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCC
Confidence 45566778899999999999999998653 6667899999988877654 5555554 344
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
.|-+.-.-....|.- -+++..++|++ ++.+|.|++++.+.+.+ |.+|++ |.+.+--.-|++++.+||++.|
T Consensus 124 GHltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VG 194 (413)
T COG0112 124 GHLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVG 194 (413)
T ss_pred CcccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhC
Confidence 455443222233321 15666777754 47999999999987753 655544 4456667789999999999999
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
.+|.+|.||=.+......+.. -++.||++|.+.||+|.+|. .|++++++.+... .+... ++.
T Consensus 195 A~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~k-kin~a---VFP---------- 256 (413)
T COG0112 195 AYLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPR-GGIILTNDEELAK-KINSA---VFP---------- 256 (413)
T ss_pred ceEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCC-ceEEEeccHHHHH-Hhhhh---cCC----------
Confidence 999999998766554433332 34569999999999999995 5777777744332 22110 111
Q ss_pred CCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcch
Q 010842 357 FKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 357 ~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~ 434 (499)
+.+++.-... .+...+++.....+++++.++..++|+.|.+.|.+. |++++.. .+...+.+.+.+.. .+
T Consensus 257 ----g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~-~~--- 327 (413)
T COG0112 257 ----GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKG-LT--- 327 (413)
T ss_pred ----ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCC-CC---
Confidence 1222222222 233445555566889999999999999999999986 9999863 45566666555321 01
Q ss_pred hHHHHHHHHHHHHhcCCEEEEee-eEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHT-IVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~-~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++....|.+.|+.+=..+ +++ ....+|+.. +.-...++|++++.+.|.++...
T Consensus 328 ----Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 328 ----GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred ----HHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 2223333334454331111 111 224589875 12234567888887777766543
No 287
>PRK08354 putative aminotransferase; Provisional
Probab=99.64 E-value=1.3e-13 Score=135.91 Aligned_cols=148 Identities=13% Similarity=0.033 Sum_probs=107.0
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++++++.+|. . .++|+|+++|+...+.... ++..|+++.++|+.+.++++.+|.
T Consensus 45 l~~~ia~~~~~--~--------I~vt~G~~~al~~~~~~~~------------~gd~vlv~~P~y~~~~~~~~~~g~--- 99 (311)
T PRK08354 45 LEEEFSKLFGE--P--------IVITAGITEALYLIGILAL------------RDRKVIIPRHTYGEYERVARFFAA--- 99 (311)
T ss_pred HHHHHHHHHCC--C--------EEECCCHHHHHHHHHHhhC------------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence 45568888873 2 4899999998765543221 456788899999999999999999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
+++.+ .+|++.|++.+++ + .+++.+.|+||||.+-+ +++|+++|+++|+|+++|.+|+.+..
T Consensus 100 ~~~~~--------~~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~ 164 (311)
T PRK08354 100 RIIKG--------PNDPEKLEELVER-N------SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK 164 (311)
T ss_pred EEeec--------CCCHHHHHHhhcC-C------CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence 88654 3578888887652 1 25788899999999955 67777888999999999999987643
Q ss_pred cCccchhhhcCCCCCceeEecccccccCC-CcceEEEE
Q 010842 291 ICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWV 327 (499)
Q Consensus 291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~ 327 (499)
.. . . .. ..--.++.+..|.++.| .-+|+++.
T Consensus 165 ~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 165 KP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred cc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 21 1 1 00 11224556789999855 55788776
No 288
>PLN02624 ornithine-delta-aminotransferase
Probab=99.64 E-value=7.9e-13 Score=137.16 Aligned_cols=307 Identities=11% Similarity=0.046 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
..++.+.|++++|++. .+++++|++||..|+..||.......+..+.+..+|.....-|-...-+..+.|-
T Consensus 119 ~~~la~~L~~~~~~~~---------~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~ 189 (474)
T PLN02624 119 FPEFAEYLTSMFGYDM---------VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCD 189 (474)
T ss_pred HHHHHHHHHhhcCCCe---------EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCC
Confidence 3334455777777654 3889999999999999998742211000000122344444445443333332221
Q ss_pred -------C--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCC
Q 010842 211 -------S--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGI 277 (499)
Q Consensus 211 -------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~ 277 (499)
+ ...+..+|. -|++.|++.++. .+..+.+|++....+++|.+-| |++|.++|++||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gi 259 (474)
T PLN02624 190 NEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNV 259 (474)
T ss_pred ccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 012233332 278999988863 2334567888888889999877 9999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++++|++|.|+......+.....++ ..|.++++ |.++.+ ..+|.++.+++ .+ ..+.. .....
T Consensus 260 llI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~~-i~-~~~~~---~~~~~--------- 322 (474)
T PLN02624 260 LMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADKD-VM-LCIKP---GEHGS--------- 322 (474)
T ss_pred EEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecHH-HH-hHhcc---CCcCC---------
Confidence 9999999986432111111112233 37888874 888766 46788777542 22 22211 00000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCceEEEEEecCCCCCC
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~v~f~~~~~~~~~ 431 (499)
+. ++.+......-+++..+..+ ++.++..++.+++.+.|++ .|. +.-+ .+...++.+.+.... .
T Consensus 323 ----T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~-~- 391 (474)
T PLN02624 323 ----TF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPK-L- 391 (474)
T ss_pred ----CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCC-c-
Confidence 00 11121222333334433222 2344455556666665554 332 2212 223334444443211 0
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
......++.+.|.++|..+ .+. +..++|+++ +..+|++||+++++.|.++.+.
T Consensus 392 ---~~~~a~~~~~~L~e~GV~v-~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 392 ---GPVSAYDVCLKLKERGLLA-KPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred ---ChHHHHHHHHHHHhCCeEE-ecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHH
Confidence 0123467778888888543 332 346799998 4779999999999999887654
No 289
>PRK07049 methionine gamma-lyase; Validated
Probab=99.64 E-value=1.8e-13 Score=139.98 Aligned_cols=225 Identities=18% Similarity=0.170 Sum_probs=156.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|....+|+. ++++.|.+. .++++||+.|+..++.+..+ ++..|+++...+..+.
T Consensus 81 ~~Pt~~~Le~~----lA~leg~~~---------~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~ 136 (427)
T PRK07049 81 NHPNSEIVEDR----LAVYEGAES---------AALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE 136 (427)
T ss_pred CCcCHHHHHHH----HHHHhCCCc---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence 34666778877 888888654 38999999987777766543 5667888888887776
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH----
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE---- 274 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~---- 274 (499)
..+ ...|+ +++.++ + ..|+++|++.+.+..+. ..+.+|++..++||+|.+-|+++|.++|++
T Consensus 137 ~~~~~~l~~~Gi---~~v~~~-~-----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~ 206 (427)
T PRK07049 137 TLLAKTFRNFGV---GAVGFA-D-----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR 206 (427)
T ss_pred HHHHHHHHhcCc---EEEEEe-C-----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence 553 45677 766665 1 35788898888654321 134578888999999999999999999988
Q ss_pred --hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 275 --YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 275 --~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
++++++||.+|....... .+.. .+|.++.+..|++++. .-+|++.. +++.. +.+......
T Consensus 207 ~~~~~~vvvDety~~~~~~~----pl~~---g~divv~S~SK~~gG~~glr~G~vv~-~~~l~-~~l~~~~~~------- 270 (427)
T PRK07049 207 QGHRPIIACDNTLLGPVFQK----PLEH---GADLSVYSLTKYVGGHSDLVAGAVLG-RKALI-RQVRALRSA------- 270 (427)
T ss_pred ccCCCEEEEECCccccccCC----cccc---CCCEEEEcCceeecCCCCcEEEEEEC-CHHHH-HHHHHHHHh-------
Confidence 899999999987653221 1111 3799999999999853 33566553 33322 222111111
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.+........|+.++.+ +.+..++++..++++.+.+.|+++|+++-+
T Consensus 271 -------------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v 317 (427)
T PRK07049 271 -------------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL 317 (427)
T ss_pred -------------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 11122356677777665 567888999999999999999999987643
No 290
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.64 E-value=6.5e-14 Score=138.03 Aligned_cols=338 Identities=14% Similarity=-0.001 Sum_probs=206.9
Q ss_pred ccccCCCCCChH-HHHHHHHHHHcccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842 92 FFAFFPATVSTA-GFLGEMLCACFNSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 92 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 164 (499)
-+.|.|++...| .++.++-.+.+|.+.. ..-.+|...++-+++.+.|.++++.|+++ .--++++|||.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence 456777776655 5555555566664331 11245778888899999999999997653 11256667887
Q ss_pred HHHHHHHHHHHHHHhHhhhhccCCe-EE-EcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCC--CccCHHHHHHHHH
Q 010842 165 SILVTLIAARDRALDAVGAENMHKL-VV-YGSDQTHST--FAKVCKLAGVSPANIRALPTSVDAN--FSLSPQLLRRAVE 238 (499)
Q Consensus 165 A~~~al~~ar~~~~~~~~~~g~~~~-~i-~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~ 238 (499)
+.-++++.... ++. ++ ++. ..+++ +.+-++.+| ++..+...+..+ .-.+++.++ +.
T Consensus 80 ~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~~--~~ 141 (364)
T PRK12462 80 QFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAELD--WD 141 (364)
T ss_pred HHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHhc--cC
Confidence 65555443322 222 22 332 35544 444455444 233333211111 244566641 11
Q ss_pred HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS 318 (499)
Q Consensus 239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 318 (499)
++ +.+|..++..|.+|+..| ++.+.++..++||+.-+.+...+ .+.+.|.+..+.+|.++
T Consensus 142 ~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pi--------d~~~~dvi~agsQKnlg- 201 (364)
T PRK12462 142 AR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPF--------DVEAYGMVYAHAQKNLG- 201 (364)
T ss_pred CC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCC--------ChHHccEEEeeccccCC-
Confidence 22 237999999999999986 33344689999998754432222 12346999999999999
Q ss_pred CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH--HHHHHHHHHHHH
Q 010842 319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL--NLQSHIRSDIRL 395 (499)
Q Consensus 319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~--g~~~~~~~~~~~ 395 (499)
|.|.++++++++.. .+.-...+.|+.-... .+ ..+...+.+- ....+-.+++.+-.+ |++.+.+++.+.
T Consensus 202 P~Gltvvivs~~al-~~~~~~~p~~ldy~~~-----~~--~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 202 PAGVTVAIIRRALL-ERVPDTLPPMLDFRTH-----VE--HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred CCceEEEEECHHHH-hhccccCCchhhHHHH-----Hh--cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 88999999988653 2222222333321100 00 0000011110 112333455555566 999999999999
Q ss_pred HHHHHHHHhcCCCeEEEc-C---CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842 396 AKMFEGFVKSDPRFEIVV-P---RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA 471 (499)
Q Consensus 396 a~~l~~~L~~~~~~~~~~-~---~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~ 471 (499)
++.+++.|.+.++|.... . .....|+|++.+ ..+.+++.+...++|.+-+.+... .+.+|+|+-
T Consensus 274 a~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~---------~~l~~~f~~~a~~~gl~~lkGhr~--vgg~Ras~y- 341 (364)
T PRK12462 274 AAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ---------PRLDTLFKEQSTEAGFCGLSGHRS--IGGIRASLY- 341 (364)
T ss_pred HHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC---------HHHHHHHHHHHHHCCCccccCCcc--cCceEEEcC-
Confidence 999999999998665432 1 234568888754 356788889999999665544322 344999995
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~ 492 (499)
..++.++++.|++-++++.++
T Consensus 342 na~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 342 NAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 678999999999999988664
No 291
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.64 E-value=3.4e-13 Score=137.81 Aligned_cols=302 Identities=15% Similarity=0.085 Sum_probs=182.6
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|...++...+.+++.+++.+. +.+.+ ..++|+|+++++.. +..... ++..|+++.+++.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~ 129 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP 129 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence 4555567788888877765332 45443 46888888887765 322211 4556888999999
Q ss_pred hHHHHHHHhCC-CC-------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHH
Q 010842 200 TFAKVCKLAGV-SP-------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPL 268 (499)
Q Consensus 200 s~~ka~~~~G~-g~-------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I 268 (499)
.+...++..|+ |. ..++.||+++++++..|+... + .+.+|+++.++||||.+-+ +++|
T Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~------~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----P------KIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred chHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----C------CceEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999998887 11 156677876544455554211 1 2346777899999999966 8889
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCC---CceeEecccccccCC-CcceEEEEeCchhH-------HHhh
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER---VDSFSFSPHKWLLSY-LDCCCLWVKQPGLL-------VKAL 337 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~---aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l-------~~~~ 337 (499)
+++|++|++++++|.+|+.+..- +.....+..+.. --.++.+..|.++.| ..+|+++.... .. ...+
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~ 276 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW 276 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence 99999999999999999865421 111111111211 124467889999755 66888887543 11 0110
Q ss_pred -cC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 338 -ST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 338 -~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
.. ...+. ....+...++...+. ...+++..+...+.++++.+.|++. ++++.
T Consensus 277 ~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 333 (402)
T TIGR03542 277 ERRQCTKFN----------------------GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVY 333 (402)
T ss_pred HHHhhhccc----------------------CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-Cceec
Confidence 00 00000 011233333333332 2334555666677778888889876 67765
Q ss_pred cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+...+.+++++.+.- + ..++.+.+.+ .|..+..+..+. +..++|+++. .++++++..++.|+++
T Consensus 334 ~~~~~~f~~v~l~~~~-------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 334 GGEHAPYLWVKTPEGI-------S--SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF---GKRENIVEACERIKEA 401 (402)
T ss_pred CCCceeEEEEECCCCC-------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHhh
Confidence 4344556666664311 1 2456677664 465544443332 3578999974 2678899999888764
No 292
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=3.8e-13 Score=136.43 Aligned_cols=308 Identities=11% Similarity=0.032 Sum_probs=180.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
..+.+.++.+++++..+.+. .++++|||+||..|+..+|...... ..+ ++.+|......|-+..-++.
T Consensus 76 ~~~~~~~la~~l~~~~~~~~---------v~f~~SGseA~e~Aik~ar~~~~~~--~~~-r~~ii~~~~~yHG~t~~~~~ 143 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFDK---------VFFANSGAEANEGAIKLARKWGRKH--KNG-AYEIITFDHSFHGRTLATMS 143 (395)
T ss_pred cCHHHHHHHHHHhhccCCCE---------EEEeCCcHHHHHHHHHHHHHHhhcc--CCC-CcEEEEECCCcCCChHHHHh
Confidence 35677777777777654432 4999999999999999998642110 001 23455556667888777777
Q ss_pred HhCCCCCCeEEeeCCCCCCC----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842 207 LAGVSPANIRALPTSVDANF----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW 278 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~ 278 (499)
..|...-.....|... .+ ..|+++|++.+.+. ..+|++.......|.+-| +++|.++|++||++
T Consensus 144 ~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~l 215 (395)
T PRK03715 144 ASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLL 215 (395)
T ss_pred hcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 6654110111111111 01 24788998888532 346777766777788776 99999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+++|+++.|+.....-+.....++ ..|.++++ |.++..+..|.++.+++-. .+ .+.....
T Consensus 216 lI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~--~~~~~~~------------ 275 (395)
T PRK03715 216 LIVDEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VF--EAGDQGG------------ 275 (395)
T ss_pred EEEeccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccccc---cc--cCCCcCC------------
Confidence 999999987422211111112344 37888774 8887666788888766421 11 1111000
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 435 (499)
|. .+.+..+....+++..+.. ++..++..++.++|.+.|+++ .++.-+ .....++.+.+....
T Consensus 276 --T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~------- 341 (395)
T PRK03715 276 --TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDI------- 341 (395)
T ss_pred --CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCch-------
Confidence 11 1222223334444554432 346777788888888888753 123212 123344555553311
Q ss_pred HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.....+...++.++|..+ ... +...+|+++ +..+|++||+.++++|.++.+++
T Consensus 342 ~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 342 GPQIVEKARDMQPDGLLL-NAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHHhccCCCEEE-eec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 111122223333448443 221 225699999 48899999999999999988764
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.62 E-value=3.9e-13 Score=137.35 Aligned_cols=302 Identities=13% Similarity=0.077 Sum_probs=174.2
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
++.+.|+++++.+. .++++|||+||..|+..||...... .+.++ .++......|-+..-+..+.|..
T Consensus 85 ~la~~l~~~~~~~~---------v~~~~sGseA~e~Alk~ar~~~~~~---~~~~r~~ii~~~~~yHG~t~~~~~~~~~~ 152 (406)
T PRK12381 85 RLAKKLIDATFADR---------VFFCNSGAEANEAALKLARKYAHDR---YGSHKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_pred HHHHHHHhhCCCCe---------EEEcCCcHHHHHHHHHHHHHHHhhc---CCCCCCeEEEECCCcCCcchhHHhhcCCc
Confidence 34445777776532 3899999999999999998653211 01122 33444555676665444444420
Q ss_pred C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc-----cCChhHHHHHHHHhCC
Q 010842 212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA-----VDNVEPLAEVANEYGI 277 (499)
Q Consensus 212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~-----id~l~~I~~ia~~~~~ 277 (499)
. ..+..+| ..|+++|++.+.++ +.+|++. |.+++|. .+.+++|.++|++||+
T Consensus 153 ~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~ 218 (406)
T PRK12381 153 KYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNA 218 (406)
T ss_pred ccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 0122222 23789999888542 3345554 5566664 3668999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
++++|.+|.|+.....-+.....++. .|.+++ -|.++..+..|.++.+++ +.+.+... ....
T Consensus 219 llI~DEv~tG~gr~G~~~~~~~~~v~-pDi~t~--sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~~---------- 280 (406)
T PRK12381 219 LLIFDEVQTGVGRTGELYAYMHYGVT-PDVLTT--AKALGGGFPIGAMLTTEK--CASVMTVG---THGT---------- 280 (406)
T ss_pred EEEEcchhhCCCCCcchhhhHhhCCC-CCEEEe--hhhhhCCCceEEEEEcHH--HHhhcCCC---CCCC----------
Confidence 99999999665322111111122332 676555 598875567888887643 22333211 0000
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPR--HFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~~ 434 (499)
+. .+.+.......++++.+. -+++.++..++.+++.+.|+++. .+.++..+ ...++.+.+.+.
T Consensus 281 ---t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~------- 346 (406)
T PRK12381 281 ---TY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAE------- 346 (406)
T ss_pred ---CC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCc-------
Confidence 00 112222223333444432 22466777788888888887651 12222211 123334444331
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
.......+.+.+.++|..+.. .+..++|+++. ...|++||++++++|.++.+++.++.
T Consensus 347 ~~~~~~~~~~~l~~~Gv~v~~----~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 347 YAGKAKQISQEAAKAGVMVLI----AGPNVVRFAPA-LNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred hhhHHHHHHHHHHHCCcEEee----CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 012356778888889965432 13357999984 66899999999999999998886654
No 294
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.62 E-value=4e-13 Score=133.85 Aligned_cols=277 Identities=13% Similarity=0.006 Sum_probs=175.3
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++++++++.+|.+.. ...++|+|+++++.. +..+.. ++. |++..+++..+..+++..|.
T Consensus 56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~~-l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIRA-LPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCc------ccEEECcCHHHHHHH-HHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 4566679999999642 135888888887653 322211 333 66688899999999999999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH---HHHHhCCEEEeeccccch
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE---VANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~---ia~~~~~~lhvD~A~g~~ 288 (499)
+++.||.+. +.+.+ .. .+++.+.|+||||.+-+.+++.+ .|++++.|+++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 12211 11 16888889999999966655555 466789999999999875
Q ss_pred hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
... +...... .... -.+..+..|.++.| .-+|+++.. ++.. +.+.. ...+-
T Consensus 176 ~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~~~~~~---------------------- 228 (339)
T PRK06959 176 LPA-ASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDALGAWT---------------------- 228 (339)
T ss_pred CCc-ccchhcc-CCCC-EEEEecChhhcCCcchheEEEecC-HHHH-HHHHHhcCCCC----------------------
Confidence 321 1111111 1111 15667889999755 668888764 3333 22221 11110
Q ss_pred CCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW 445 (499)
Q Consensus 367 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~ 445 (499)
...+...++...+.. +..++..++..+.++++.+.|++. ++++. +..+.+.++.. . ..++.+.
T Consensus 229 -vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--~----------~~~l~~~ 292 (339)
T PRK06959 229 -VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--R----------AAALHAA 292 (339)
T ss_pred -CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--C----------HHHHHHH
Confidence 123344444444432 345566677777888999999887 67654 22233334432 1 3567888
Q ss_pred HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 446 VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 446 l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
|.++|+.+ .. +....++|+++. .+.++.++++++|+++.+.+...+
T Consensus 293 l~~~GI~v-r~--~~~~~~lRisi~---~~~~e~~~l~~al~~~~~~~~~~~ 338 (339)
T PRK06959 293 LARRGIWT-RY--FAPPPSVRFGLP---ADEAEWQRLEDALAECVPTLAAAS 338 (339)
T ss_pred HHhCCeEE-EE--CCCCCeEEEECC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 88888654 32 233458999984 367899999999999988876654
No 295
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.60 E-value=6.4e-13 Score=132.07 Aligned_cols=268 Identities=12% Similarity=0.070 Sum_probs=168.6
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA 213 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~ 213 (499)
+++.+++.+|.+ . .++|+|+++++...+.+ . ++..|++..+++..+...++.+|+
T Consensus 54 Lr~~ia~~~~~~-~--------I~it~Gs~~al~~~~~~--~-----------~gd~v~v~~P~y~~~~~~~~~~g~--- 108 (330)
T PRK05664 54 LEAAARAYYGAP-Q--------LLPVAGSQAAIQALPRL--R-----------APGRVGVLSPCYAEHAHAWRRAGH--- 108 (330)
T ss_pred HHHHHHHHhCCC-C--------EEECcCHHHHHHHHHHc--c-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 344577878753 2 58899999987665321 1 566788999999999999999999
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
+++.||.+ ++++.++ ++ .+++.+.|+||||.+-+ +++|+++|+++++++++|.+|..+.-
T Consensus 109 ~~~~v~~~----------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~ 171 (330)
T PRK05664 109 QVRELDEA----------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP 171 (330)
T ss_pred eEEEechh----------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC
Confidence 99888763 3444442 22 25778899999999955 56666778899999999999965421
Q ss_pred cCccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 291 ICPEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 291 ~~~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.+..... . ..-. .++.+..|.++.| .-+|+++.. ++.. +.+.. ...+.
T Consensus 172 -~~s~~~~-~--~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~~~~----------------------- 222 (330)
T PRK05664 172 -QHSLAAC-A--HRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLGPWT----------------------- 222 (330)
T ss_pred -ccccccc-c--cCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcCCCC-----------------------
Confidence 1111111 1 1112 5677889999744 668888874 3332 22221 11110
Q ss_pred CCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
...+..+++...+. ....++..++..+.++++.+.|++. +++.. ....+.+.++. + . ...+.+.|
T Consensus 223 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~-~----------~~~~~~~l 288 (330)
T PRK05664 223 VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-E-D----------AAALHEFL 288 (330)
T ss_pred CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-C-C----------HHHHHHHH
Confidence 01233333333332 2334556667777788899999887 55321 12223333333 2 1 35677778
Q ss_pred HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++|+.+.. +....++|++++ .+.++.++++++|+++.++
T Consensus 289 ~~~gi~v~~---f~~~~~iRis~~---~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 289 ARRGILTRL---FEQPASLRFGLP---ADEADWARLDQALLAYRKE 328 (330)
T ss_pred HHCCeEEEE---CCCCCeEEEECC---CCHHHHHHHHHHHHHHHhh
Confidence 888865532 334468999986 2678899999999877554
No 296
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.60 E-value=1.7e-13 Score=137.24 Aligned_cols=327 Identities=15% Similarity=0.154 Sum_probs=213.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchh
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHST 200 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s 200 (499)
++..+..++-.++..|||++.|++.-. +-.++|..+-..+|.+.|.....+ |. .+-+++++..+|-.
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~~s--------~QPNsGA~GEYaGL~~IRaY~~~k----ge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDSFS--------LQPNSGAQGEYAGLRVIRAYLESK----GEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeeccccee--------ecCCCCcccchhhHHHHHHHHHhc----cCCcceeEEEeecccCC
Confidence 445667788888889999999997631 334456666667777766554332 22 35677888889999
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEE
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWV 279 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~l 279 (499)
-...+.+.|+ .|+.|.++.+| .+|+.+|+++.++...+ -.++.+|.++| .|.+++ +++++++.|+||--+
T Consensus 643 NPASA~Magm---kvvpV~~~~~G--~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQV 713 (1001)
T KOG2040|consen 643 NPASAAMAGM---KVVPVGCDANG--NIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQV 713 (1001)
T ss_pred ChhhHHhcCC---EEEEeeccCCC--CccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEE
Confidence 9999999999 99999998766 99999999998876542 24788899988 688854 999999999999999
Q ss_pred Eeeccccchhc-cCccchhhhcCCCCCceeEecccccccCCCcce-----EEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 280 HVDAAYAGSAC-ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC-----CLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 280 hvD~A~g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g-----~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
..|||---... ++ ..|--++|+.-.+.||.++.|-|.| -+.|+.. + ++||.+...-...
T Consensus 714 YlDGANMNAqVGlc------~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H--L-------apfLP~HpVvs~~ 778 (1001)
T KOG2040|consen 714 YLDGANMNAQVGLC------RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L-------APFLPSHPVVSPG 778 (1001)
T ss_pred EecCCCccceeccc------CCccccccceeecccceeeecCCCCCCCCCccchhhh--c-------cccCCCCCccCCC
Confidence 99998532211 11 1133359999999999998885544 4444431 2 3444432211000
Q ss_pred -cccCCCcccCCCCCCC-c--H-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE----EEe
Q 010842 354 -VVDFKDWQVGTGRRFK-S--L-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC----FRL 424 (499)
Q Consensus 354 -~~~~~~~~~~~sr~~~-a--l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~----f~~ 424 (499)
..+-...+.-.+.+++ + | --|+.++.+|..|++..-+-.+-+|+|+.++|+.+ ++++.....+.+. +..
T Consensus 779 ~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~ 856 (1001)
T KOG2040|consen 779 RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDL 856 (1001)
T ss_pred CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeec
Confidence 0000011111122232 2 3 35999999999999999999999999999999975 5555332222332 222
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++-......+ ...+.++|..-| |-.|+. |--.+.+-|-.+ ..-+++++|++++++..+.+++
T Consensus 857 r~fK~~agie----avDvAKRL~DYg--FHaPTmswPV~gtLMIEPT-ESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 857 RPFKKTAGIE----AVDVAKRLMDYG--FHAPTMSWPVAGTLMIEPT-ESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred hhhccccCCc----HHHHHHHHHhcc--CCCCccccccCCceEeccC-ccccHHHHHHHHHHHHHHHHHH
Confidence 3321101111 234556666657 444432 222344555554 6678899999999997777665
No 297
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.59 E-value=5.5e-13 Score=124.04 Aligned_cols=315 Identities=16% Similarity=0.099 Sum_probs=213.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-----h
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH-----S 199 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H-----~ 199 (499)
+....+-..+.+.++.++|..... ++..++|..|+.-++++--+.. .+-.|++|+... |
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~E--------vvv~dtts~nl~k~L~aalr~~--------~~r~vIv~E~~~fpTdly 135 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAGE--------VVVTDTTSINLFKVLAAALRPQ--------EGRRVIVSEGDNFPTDLY 135 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCCc--------eEEeCCcchHHHHHHHHHhccC--------CCceEEeecCCCCCcchh
Confidence 344566677888899999997653 4444445566655554432211 233455565443 3
Q ss_pred hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
-.+..+.++|.|. +-. ..+.+++++++++++++ +|+.++.+.-||..-++.+|..++|++|+.+
T Consensus 136 ~a~g~~~~~~~~~--------~~~--~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~galv 199 (407)
T COG3844 136 IAEGLADLLGIGY--------DLE--GVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGALV 199 (407)
T ss_pred hhcchhhhhcccc--------cce--eeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCceE
Confidence 3455677788742 111 26788899999999876 8899999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC-CC--cc
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES-NS--VV 355 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~-~~--~~ 355 (499)
.-|=||+.+.+..+-+. .++|+-+++.||+|+ +|.+.+++++.++.. .........++....... .. ..
T Consensus 200 ~wDLAHsaGavp~~Lh~------~gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p 272 (407)
T COG3844 200 GWDLAHSAGAVPVDLHA------AGADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAP 272 (407)
T ss_pred EeehhcccCCcceeecc------cCCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCc
Confidence 99999998877654333 259999999999995 466678888866532 223333445554322100 00 00
Q ss_pred cCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcC----CCceEEEEEecC
Q 010842 356 DFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVP----RHFALVCFRLNP 426 (499)
Q Consensus 356 ~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~----~~~~~v~f~~~~ 426 (499)
..+-..+.+|... ....+-.+|.....-++.+..++...++.++.+.++.. + ++++..| .....|+|..+.
T Consensus 273 ~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~ 352 (407)
T COG3844 273 GPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH 352 (407)
T ss_pred CccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc
Confidence 0111112222221 22345556777777779999999999999999999864 2 5777764 345678887653
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
..++.+.|.++|.+ ..+.....+|+.++-.+++-+||=..++.|.++.+.+.
T Consensus 353 ------------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 353 ------------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ------------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 46778888889953 23445578999998889999999999999999887653
No 298
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=4.8e-12 Score=130.00 Aligned_cols=316 Identities=13% Similarity=0.042 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|++++.-..+ ...|+++||||+..|+..||...... +..| ++.+|......|-...-+....
T Consensus 85 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~~ 155 (423)
T PRK05964 85 EPAERLAQRLVALTPGGLD-------HVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSVG 155 (423)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhcC
Confidence 4445566668887631111 24899999999999999998753211 0001 2223444444555443333332
Q ss_pred CCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc----CChhHHHHHHHH
Q 010842 209 GVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV----DNVEPLAEVANE 274 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i----d~l~~I~~ia~~ 274 (499)
+-+ ...+..+|...+.....++++|++.+.+. +..+.+|++.- .....|.+ +.+++|.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~ 232 (423)
T PRK05964 156 DRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR 232 (423)
T ss_pred CCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence 210 01234455432110122377888877532 22344444433 24445655 339999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC---ccCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD---PEYLKNKPSE 350 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~---~~yl~~~~~~ 350 (499)
||+++++|+++.|+.....-+.....++ ..|.++++ |+++.+ +..|+++.+++ +.+.+... ..++..
T Consensus 233 ~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~~---- 303 (423)
T PRK05964 233 HGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTAE--IFEAFYSDDRAKAFMHS---- 303 (423)
T ss_pred cCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcHH--HHHhhhcCCcccccccC----
Confidence 9999999999976532211111112233 37877765 999776 56888776543 22333211 000100
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEec
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLN 425 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~ 425 (499)
.+-....+.+.++ ++.+.. +.+.++..++.+++.+.|+++.++..+. .....++.+.+.
T Consensus 304 -------------~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~ 367 (423)
T PRK05964 304 -------------PSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD 367 (423)
T ss_pred -------------CCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec
Confidence 1111233443333 443322 2456777788888888877653332221 123344556664
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
... .+.....+.+.|.++|.++ .+. + ..+|++. +..+|++|||+++++++++.+++
T Consensus 368 ~~~------~~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 368 RPV------LERDGPALRAFALERGVLL-RPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred cCc------chhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 321 0123567888888899544 321 1 4699998 47899999999999999988764
No 299
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.58 E-value=1.1e-12 Score=129.73 Aligned_cols=289 Identities=18% Similarity=0.209 Sum_probs=193.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...|-...+|+. ++++=|... ++.+++|..|+..++.+... ++..|+++...+...
T Consensus 60 ~~nPT~~~lE~~----~a~LEg~~~---------~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t 115 (396)
T COG0626 60 TGNPTRDALEEA----LAELEGGED---------AFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT 115 (396)
T ss_pred CCCccHHHHHHH----HHHhhCCCc---------EEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence 446777888888 777776554 48889998887777666543 466777777776553
Q ss_pred H----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 202 A----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 202 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
. +....+|+ ++.+++. .+.+++++++.+ +++ +|.+-.++||+.-+-||.+|+++|+++|
T Consensus 116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~tk------~v~lEtPsNP~l~v~DI~~i~~~A~~~g 179 (396)
T COG0626 116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNTK------LVFLETPSNPLLEVPDIPAIARLAKAYG 179 (396)
T ss_pred HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCce------EEEEeCCCCcccccccHHHHHHHHHhcC
Confidence 3 33445677 7777653 255566766664 554 8999999999999999999999999999
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+.++||..|+...+.- ++..| ||.+.-+..|++++.-+ .|++..+++......+.....++
T Consensus 180 ~~vvVDNTfatP~~q~----PL~~G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~---------- 242 (396)
T COG0626 180 ALVVVDNTFATPVLQR----PLELG---ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT---------- 242 (396)
T ss_pred CEEEEECCcccccccC----hhhcC---CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc----------
Confidence 9999999998875432 22233 99999999999988755 46555555543321111111111
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC----------------Cc
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR----------------HF 417 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~----------------~~ 417 (499)
|--..+...|+.++- .+.+.-+++++.++|..+.++|++.|.++-+. |. ..
T Consensus 243 ----------G~~l~p~dA~l~lRG--lkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~g 310 (396)
T COG0626 243 ----------GAVLSPFDAWLLLRG--LRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYG 310 (396)
T ss_pred ----------CCCCCHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCc
Confidence 112235566877764 48889999999999999999999999987543 31 34
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCE--EEE-ee--e---E-------C--CEEEEEEeccCCCC
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRV--YLT-HT--I---V-------G--GLYMLRFAVGASLT 474 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~-~~--~---~-------~--g~~~lRi~~~~~~~ 474 (499)
++++|.+... +...++.+.|.-- |-+ .+. +. . . . ..+.+|++++
T Consensus 311 g~~Sf~l~~~---------~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG---- 377 (396)
T COG0626 311 GLFSFELKNE---------EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG---- 377 (396)
T ss_pred eEEEEEeCCh---------HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec----
Confidence 6788888651 2234455443211 110 011 10 0 0 0 2467999996
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGADRL 493 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~~l 493 (499)
-||++.+++.|++..+.+
T Consensus 378 -lEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 378 -LEDVEDLIADLEQALAKA 395 (396)
T ss_pred -CCCHHHHHHHHHHHHHhh
Confidence 467888888887776543
No 300
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.57 E-value=1.4e-11 Score=126.33 Aligned_cols=317 Identities=14% Similarity=0.096 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
..+.++.+.|++++..+... .....| ++||||||..|+..||... | ++.+|.....-|-...-+...
T Consensus 82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~ 149 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT-------G-RTNIVAFTNGFHGMTLGSLAV 149 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEECCccCCccHHHHHh
Confidence 34444555677765322110 001245 4799999999999998652 1 222333344456544433333
Q ss_pred hC---------CCCCCeEEeeCCCCCCCc-cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHH
Q 010842 208 AG---------VSPANIRALPTSVDANFS-LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVAN 273 (499)
Q Consensus 208 ~G---------~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~ 273 (499)
.| .....+..+|........ -|+++|++.+++.......+.+|++--.....|.+ +.+++|.++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~ 229 (425)
T PRK09264 150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR 229 (425)
T ss_pred cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence 22 111245666654210001 26788888886532111234556655555555654 46999999999
Q ss_pred HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
+||+++++|+++.|+......+.....++ ..|.++++ |.++. .+.+|+++++++ + ..+. .... .
T Consensus 230 ~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i-~~~~--~~~~-~------ 294 (425)
T PRK09264 230 KHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--L-DVWK--PGEH-N------ 294 (425)
T ss_pred HcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--h-hccC--CCcc-C------
Confidence 99999999999977532211111111233 36888775 98875 456788888754 2 1111 0000 0
Q ss_pred CcccCCCcccCCCCCCCcHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCC-CceEEEEEecC
Q 010842 353 SVVDFKDWQVGTGRRFKSLRLWMVL-RSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPR-HFALVCFRLNP 426 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~-~~~~v~f~~~~ 426 (499)
. +. .+.+.......+++ ..+.. .+..++..++.++|.+.|++ .|.+ +.... ...++.+.+.+
T Consensus 295 -----~--T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~ 362 (425)
T PRK09264 295 -----G--TF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD 362 (425)
T ss_pred -----C--CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC
Confidence 0 00 11111122222334 22222 24556666667777766654 3322 11111 22334555533
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
......+.+.+.++|..+.. .... ...||+++ ....|++||++++++|.++.+++.++
T Consensus 363 ---------~~~~~~l~~~~~~~Gv~~~~-~~~~-~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 363 ---------GELAGKIAAEAFENGLIIET-SGPE-DEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred ---------hHHHHHHHHHHHHCCCEEec-cCCC-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 23456788888899965432 2111 25688887 36789999999999999998876543
No 301
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=1.1e-11 Score=127.57 Aligned_cols=313 Identities=10% Similarity=0.031 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.....++.+.|++++.-+.. ...|+++|||||-.|+..||.....+ | +..+|......|-...-+...
T Consensus 123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 190 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSA 190 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhh
Confidence 33444455557777642211 24899999999999999998763211 1 122333334445544444443
Q ss_pred hCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842 208 AGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE 274 (499)
Q Consensus 208 ~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~ 274 (499)
.|-.. ..+..+|. -|.++|++.+++....+..+.+|++--.....|.+-| ++++.++|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~ 263 (459)
T PRK11522 191 TAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE 263 (459)
T ss_pred cCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 33210 01222322 1788999988764333445666777666667788877 9999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++.. +.+|.++.+++ .. +.+... ++....
T Consensus 264 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~------ 331 (459)
T PRK11522 264 FGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT------ 331 (459)
T ss_pred cCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC------
Confidence 9999999999976422211111122344 3787766 6888754 35788887753 22 222211 111111
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-EEcC--CCceEEEEEecCCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFE-IVVP--RHFALVCFRLNPYPH 429 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-~~~~--~~~~~v~f~~~~~~~ 429 (499)
.-.+.+..+....++|+.+-.+ +..++..++.++|.+.|+++. .+. ++.. ....++.+.+...
T Consensus 332 --------T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~-- 398 (459)
T PRK11522 332 --------TFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN-- 398 (459)
T ss_pred --------CCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--
Confidence 0112222233344455555333 456777788888888887641 121 1111 1234455555431
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.....+.+.+.++|.++ .+.. .+...+|+++. ...|++||++++++|.++.+++.
T Consensus 399 -------~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 399 -------EIGYNFASEMFRQRVLV-AGTL-NNAKTIRIEPP-LTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred -------hHHHHHHHHHHHCCeEE-EecC-CCCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHHH
Confidence 23566788888888543 3322 23467999984 77899999999999999887764
No 302
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.55 E-value=9.1e-13 Score=133.69 Aligned_cols=230 Identities=21% Similarity=0.191 Sum_probs=168.5
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN 214 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~ 214 (499)
.+..++.||.+.++ ++++|.|.||...+.+... ++..|+++++.|.|+..++.+.|+ .
T Consensus 76 qe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa---~ 133 (557)
T COG1982 76 QELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA---T 133 (557)
T ss_pred HHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---c
Confidence 35589999999986 8888888888877776643 688999999999999999999999 8
Q ss_pred eEEeeCCCCCC----CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842 215 IRALPTSVDAN----FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 215 v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
.+++....+.. +.++.+.+++++.+..... .++++|.|| ..|.+-++++|.+.++.+++|+.+|.+++...-
T Consensus 134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~ 209 (557)
T COG1982 134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFD 209 (557)
T ss_pred eEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCccccc
Confidence 88876554321 4789999999987654321 256677765 589999999999999999999999999987765
Q ss_pred cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc-----hhHHHhh----cCCccCCCCCCCCCCCcccCCCcc
Q 010842 291 ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-----GLLVKAL----STDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-----~~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
.++..... .--..+|.++.|.||.+.+-..++++.+++. +.+.+++ +.+|.|.--
T Consensus 210 ~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~--------------- 273 (557)
T COG1982 210 FSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM--------------- 273 (557)
T ss_pred ccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH---------------
Confidence 55433221 1112499999999999998888999999972 3333333 222222211
Q ss_pred cCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 362 VGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 362 ~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.++-+ +-+.. |+.-.++.++...+.++++++.+.++++|+++.++
T Consensus 274 -------ASlD~--Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 274 -------ASLDV--ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred -------HHHHH--HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 11222 22222 44445556888899999999999999889888765
No 303
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=1.1e-11 Score=125.48 Aligned_cols=277 Identities=13% Similarity=0.116 Sum_probs=158.4
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC------CeEEeeCCCCCCCccC
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA------NIRALPTSVDANFSLS 229 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~------~v~~v~~~~~~~~~~d 229 (499)
.++++|||+||..|+..+|... + ++.+|......|-+...++...|.... .+..++... ..|
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~-------~-~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d 154 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKAT-------G-KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FND 154 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCC
Confidence 4799999999999999997642 1 233455556678877766655443100 011111110 248
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV 305 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a 305 (499)
+++|++.+.++ ..+|++....+++|.+.+ +++|.++|+++|+++++|++|.++......+.....++ .-
T Consensus 155 l~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~p 227 (375)
T PRK04260 155 LNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-EP 227 (375)
T ss_pred HHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-CC
Confidence 89999887532 346777777788888854 89999999999999999999976422111111112233 25
Q ss_pred ceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHH-
Q 010842 306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLN- 384 (499)
Q Consensus 306 Dsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g- 384 (499)
|.+ +..|.++..+..|+++.+++ +...+... .+.. +. .+.+..+..+..++..+..++
T Consensus 228 di~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~~~---------------t~-~~~~~~~~aa~a~l~~~~~~~~ 286 (375)
T PRK04260 228 DIF--TLAKGLANGVPVGAMLAKSS--LGGAFGYG-SHGS---------------TF-GGNKLSMAAASATLDIMLTAGF 286 (375)
T ss_pred CEE--EecccccCCcceEEEEEcHH--HHhhcCCC-CCCC---------------CC-CcCHHHHHHHHHHHHHHHhhHH
Confidence 655 45898875566888888753 22222210 0000 00 111112223333444433233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842 385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM 464 (499)
Q Consensus 385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 464 (499)
.++..+....+.+.+.+.+.+.+.+.-+. .....+.+.+... ..++.+++.++|..+... +...
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----------~~~~~~~l~~~Gi~v~~~----~~~~ 350 (375)
T PRK04260 287 LEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD-----------LSQLVEAARDKGLIVLTA----GTNV 350 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc-----------HHHHHHHHHhCCCEEecC----CCCE
Confidence 22333333334444444444444332221 2334455554221 356788888889754322 3467
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 465 LRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 465 lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+|+++ +...+++||++++++|+++
T Consensus 351 lR~~~-~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 351 IRLLP-PLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEcC-CCccCHHHHHHHHHHHHHh
Confidence 99999 4778899999999999765
No 304
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.53 E-value=2.2e-13 Score=132.47 Aligned_cols=266 Identities=15% Similarity=0.215 Sum_probs=181.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--hhhcc-----CCeEEEcCCCCch
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--GAENM-----HKLVVYGSDQTHS 199 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--~~~g~-----~~~~i~~s~~~H~ 199 (499)
+.-+.-.+..|+..+|.+.++..++......|...-..|+..++..|....++.. -+.|+ ..+++|+|+..|.
T Consensus 163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~ 242 (838)
T KOG0630|consen 163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM 242 (838)
T ss_pred HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence 3445556778999999986642111101112222222344445544443333321 01122 3678999999998
Q ss_pred h-HHHHHHHhCCCCCCeEEeeCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 200 T-FAKVCKLAGVSPANIRALPTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 200 s-~~ka~~~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
- ...+|+-+|+.-..+..++-...+ .++||.-.+++.|+++..+|++|.++++..|++-+|..|.|-.|.++|++++
T Consensus 243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha 322 (838)
T KOG0630|consen 243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA 322 (838)
T ss_pred HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence 6 556889999954344444322222 2599999999999999999999999999999999999999999999999997
Q ss_pred -CEEEeeccccchhccCccchhhhcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 277 -IWVHVDAAYAGSACICPEFRHYLNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 277 -~~lhvD~A~g~~~~~~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+|+|.-| ++..++.|.+....+.. .+..||++++.--|+++|.---+++-|.-. ..+..-+
T Consensus 323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPle-------g~aaSaf--------- 385 (838)
T KOG0630|consen 323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLE-------GSAASAF--------- 385 (838)
T ss_pred heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccc-------cccchhc---------
Confidence 9999987 34444455442222222 345899999999999999544444333211 0000000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
+-.+...++..++.+|.+++++|...+.++++....+.+.+.+.+.+.++++++.
T Consensus 386 ----esdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 386 ----ESDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred ----ccChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 0012356778899999999999999999999999999999999999999999875
No 305
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=6.5e-11 Score=122.00 Aligned_cols=318 Identities=11% Similarity=0.021 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|++++.-..+ ..+|+++||+||..|+..||... | ++.+|......|-+..-+..+.
T Consensus 86 ~~~~~la~~L~~~~~~~~~-------~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~~ 150 (433)
T PRK08117 86 ESILKLAEELAEITPGGLD-------CFFFSNSGAEAIEGALKLAKHVT-------K-RPYIISFTGCFHGRTLGALSVT 150 (433)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCcCHHHHhhc
Confidence 3444455558887731111 24888999999999999998652 1 2334455555677655544332
Q ss_pred CC--------C--CCCeEEeeCCCCCCCc------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 209 GV--------S--PANIRALPTSVDANFS------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 209 G~--------g--~~~v~~v~~~~~~~~~------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
+- + ...+..+|.... ++ -|+++|++.++... .+..+.+|++--.....|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~ 227 (433)
T PRK08117 151 TSKSKYRKYYQPLLGSVYQAPYPYC--DRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPK 227 (433)
T ss_pred CCCccccccCCCCCCCcEEeCCCcc--ccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCH
Confidence 21 0 113445554321 11 15666777765421 1234556666666666788878
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
+++|.++|++||+.+++|.+|.|+.....-+.....++. .|.+ ..-|.++..+..|+++.+++ +...+...
T Consensus 228 ~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~-pDi~--t~sK~lg~G~pigav~~~~~--i~~~~~~~-- 300 (433)
T PRK08117 228 SFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVV-PDIM--TIAKGIASGLPLSAVVASKE--LMEQWPLG-- 300 (433)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCC-CCEe--ehhhhccCCCcceeEEEcHH--HHhhccCC--
Confidence 999999999999999999999874322111111112332 5654 45798876566888877653 22222110
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC-CCc-eE
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP-RHF-AL 419 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~~~-~~ 419 (499)
. .. .+. .+.+.......++++.+..+ ...++..++.+++.+.|+++. .+.++.. +.. .+
T Consensus 301 -~-~~------------~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~ 362 (433)
T PRK08117 301 -S-HG------------TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLM 362 (433)
T ss_pred -C-CC------------CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcE
Confidence 0 00 011 11122222333344433222 455666677777777776541 1111111 111 22
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.+.+.+.. ... .......+.+.+.+.|..+.... ....++|+++. ..+|+++|++++++|.++.+++.+
T Consensus 363 ~gi~~~~~~-~~~--~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 363 IGIEIVDPD-GEP--DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIPP-LTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred EEEEEecCC-CCc--chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence 334443221 000 12345667788888997654321 12357999984 678999999999999999887643
No 306
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.51 E-value=1.1e-10 Score=119.42 Aligned_cols=307 Identities=9% Similarity=0.022 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.....++.+.|++++..+.. ..+|+++|||||-.|+..||...... | +..+|.....-|-...-+...
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 183 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIAASGAFHGKSLGALSA 183 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc----C-CcEEEEECCCccCCCHHHhhc
Confidence 33445556668887643222 24889999999999999998763211 1 122344444456554444433
Q ss_pred hCC-------C--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842 208 AGV-------S--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE 274 (499)
Q Consensus 208 ~G~-------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~ 274 (499)
.|- + ...+..+|.+ |.+++++.+++....+..+.+|++--....-|.+-| +++|.++|++
T Consensus 184 t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~ 256 (442)
T TIGR03372 184 TAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE 256 (442)
T ss_pred cCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 221 0 0123444432 678888888654434455666666666666788877 9999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++.. +.+|.++.+++ +.+.+... .+....
T Consensus 257 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~--i~~~~~~~-~~~~~~------ 324 (442)
T TIGR03372 257 FGALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA--VFSVLFDN-PFLHTT------ 324 (442)
T ss_pred cCCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH--HHHhhhcc-CccccC------
Confidence 9999999999976432221111222344 3788774 6888754 35777777643 22333211 111111
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEEcCCCceEEEEEecCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PR-FEIVVPRHFALVCFRLNPYP 428 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~ 428 (499)
.-.+.+..+....++|+.+-.+ +..++..++.++|.+.|+++ |. +.-+ .....++.+.+..
T Consensus 325 --------T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~-- 390 (442)
T TIGR03372 325 --------TFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRD-- 390 (442)
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCC--
Confidence 0011122222333444444333 34556666677777766653 31 1111 1223345555543
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.....+.+.+.++|.++ .... .+...+|+... ...|++|||++++++.+.
T Consensus 391 -------~~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 391 -------NEIGYAFAKELFQQNILV-AGTL-NNAKSIRIEPP-LTITIEQCALVIKAAKDA 441 (442)
T ss_pred -------hHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 123467888888888544 3221 12357999884 778999999999999875
No 307
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.5e-12 Score=126.08 Aligned_cols=344 Identities=12% Similarity=0.051 Sum_probs=211.1
Q ss_pred CCCccccccCCCCCChHHHHHHHHHH-HcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 87 WLSPNFFAFFPATVSTAGFLGEMLCA-CFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
..+=.|+||-.+...-.....+.+.. .+.......+ -+...+-+++.+.+++++|.++. ++.+-|-..
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e--~G~~~~hkelE~l~A~f~g~e~a---------~vF~mGf~T 209 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHE--AGTTEEHKELEELVARFLGVEDA---------IVFSMGFAT 209 (519)
T ss_pred ecccccccccccCCcCChHHHHHHHHhcccccccchh--cccHHHHHHHHHHHHHhcCCcce---------EEEeccccc
Confidence 34556777764433322223333332 2222222222 24566777777889999999876 333333322
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 245 (499)
|-+.+-+... ++..|+-.+..|.|+...|++-|. .++....+ |+.+||+.|.+....|.
T Consensus 210 Ns~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~gq 268 (519)
T KOG1357|consen 210 NSMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYGQ 268 (519)
T ss_pred cccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcCC
Confidence 3222222221 466677788899999999999999 88888754 78999999998877653
Q ss_pred c----c---EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh----hhcCCCCCceeEecccc
Q 010842 246 V----P---LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH----YLNGIERVDSFSFSPHK 314 (499)
Q Consensus 246 ~----p---~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~----~~~g~~~aDsi~~~~hK 314 (499)
. | .+|++-.-.+.-|.+.++.++.+++|+|..+||.|+||..++... .-+. ...+-+.+|.+-.-+.|
T Consensus 269 P~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~-tGrgvce~~g~d~~dvDImMGtftK 347 (519)
T KOG1357|consen 269 PKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGA-TGRGVCEYFGVDPEDVDIMMGTFTK 347 (519)
T ss_pred CCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCC-CCcceeeccCCCchhheeecceehh
Confidence 2 2 455555556689999999999999999999999999998876521 1111 11223457888888888
Q ss_pred cccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh----cHHHHHHHHH
Q 010842 315 WLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY----GVLNLQSHIR 390 (499)
Q Consensus 315 ~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~~~~~ 390 (499)
.++.. .|.+..+ +. +.+.+.....+-... ...+.+ -+.....+++.+ |.+.-++.++
T Consensus 348 Sfga~--GGyiags-k~-lid~lrt~s~~~~ya--------------t~~spp-vaqq~~ssl~~i~G~dgt~~g~~k~~ 408 (519)
T KOG1357|consen 348 SFGAA--GGYIAGS-KE-LIDYLRTPSPSALYA--------------TSLSPP-VAQQILTSVKHIMGEDGTNRGRQKIE 408 (519)
T ss_pred hcccc--cceecCc-HH-HHhhhccCCCceeec--------------ccCChH-HHHHHHHHHHhhcCCCcccHHHHHHH
Confidence 88642 3333332 22 323333322221111 111111 122333344443 3456788999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee---eECCEEEEEE
Q 010842 391 SDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT---IVGGLYMLRF 467 (499)
Q Consensus 391 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lRi 467 (499)
+..+++++++..+++. +|.+.+..+++++..-+.+.. ....+.++|.+++..++... +.--....|+
T Consensus 409 ~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~---------k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~ 478 (519)
T KOG1357|consen 409 RLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA---------KIVAFSREMLERNIGVVVVGFPATPLLESRARF 478 (519)
T ss_pred HHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc---------cccHHHHHHHhcCceEEEEeCCCchHHHhHHHh
Confidence 9999999999999987 898887666665555443321 13344555666665433221 1111234788
Q ss_pred eccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 468 AVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 468 ~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
|.. ...|.|+++++++.+.+..+..
T Consensus 479 c~S-a~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 479 CLS-ASHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred hhc-ccccHHHHHHHHHHHhhhchhh
Confidence 884 7889999999999999887543
No 308
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.50 E-value=7.8e-11 Score=122.60 Aligned_cols=330 Identities=12% Similarity=0.040 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.|.+++.-..- ...+|+++||+||..|+..||...... +..+ ++.+|......|-+..-++.+
T Consensus 132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~~-g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNAL-GRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCccCChHhhhhc
Confidence 34445555557777532111 124889999999999999998643110 0001 234555666678776656554
Q ss_pred hCCC---------CCCeEEeeCCCCCCCc-------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842 208 AGVS---------PANIRALPTSVDANFS-------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN- 264 (499)
Q Consensus 208 ~G~g---------~~~v~~v~~~~~~~~~-------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~- 264 (499)
.|.. ...+..+|.+. .|+ ...++|++.+.+. ....+.+|++--.....|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~ 279 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPP 279 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCC
Confidence 4431 11133333221 011 1124566666421 1234556666555556688878
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~ 340 (499)
+++|.++|++||+++++|.++.|+.....-+.....|+. .|.+++ -|.++..+ ..|.++++++ +.+.+...
T Consensus 280 ~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~-PDivtl--gK~lggG~~PigAv~~~~~--i~d~~~~~ 354 (504)
T PLN02760 280 ATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIK-PDLVSL--AKALSSAYMPIGAVLVSPE--ISDVIHSQ 354 (504)
T ss_pred HHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCC-CcEEEe--cccccCCccccceEeecHH--HHhhhhcc
Confidence 999999999999999999999665443332222234553 887776 58876543 4666777643 22333211
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCce
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFA 418 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~ 418 (499)
...... + ....+-....+.+.+++..+..-.-++.+++..++.++|.+.|+++....++.+ -...
T Consensus 355 ~~~~~~----------~---~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 421 (504)
T PLN02760 355 SNKLGS----------F---AHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGL 421 (504)
T ss_pred cccccC----------c---ccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCce
Confidence 000000 0 000111112344444443332111124677788888888888876532222211 1123
Q ss_pred EEEEEecCCCC-CCcc-hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPH-SGSA-DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~-~~~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.+.+..... .+.. ....+...+.+.+.++|.++.. .+ ..+|++.. ...|++|||++++++.++.+++
T Consensus 422 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~Pp-l~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 422 ILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSPP-LIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEe----cC-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 44444432210 0000 0123466788888899965432 12 35898874 6689999999999999887765
No 309
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.49 E-value=4.6e-11 Score=115.57 Aligned_cols=333 Identities=12% Similarity=0.118 Sum_probs=207.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|.++.+..++-..+.+.....+..+... ..+.++|+|.|.+...++..+.+ .+..|++...++.
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccch
Confidence 45666777777777665444455554321 12578999999999999998877 4678999999999
Q ss_pred hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--C-CccEEEEEec--CCCcccccCCh---hHHHHH
Q 010842 200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--G-LVPLFLCATV--GTTSTTAVDNV---EPLAEV 271 (499)
Q Consensus 200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g-~~p~~vv~t~--gtt~~G~id~l---~~I~~i 271 (499)
+...+++.+|+ .++.|+.|.+ .++++.|++.+..-+-. + ..|. |.-|. |.||||.--.+ ++|.+|
T Consensus 160 ~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~L 232 (472)
T KOG0634|consen 160 SALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQL 232 (472)
T ss_pred HHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHH
Confidence 99999999999 8888888765 59999999998764322 1 2353 44444 56999998665 789999
Q ss_pred HHHhCCEEEeeccccchhccC---------ccch------hhhcCCCCC----ceeEec-ccccccCCCcceEEEEeCch
Q 010842 272 ANEYGIWVHVDAAYAGSACIC---------PEFR------HYLNGIERV----DSFSFS-PHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~---------~~~~------~~~~g~~~a----Dsi~~~-~hK~l~~p~~~g~l~~r~~~ 331 (499)
|++|++.++.|..|.-..+.. |.+. .+....-.. -+|..| +.|.+....-.|++-..+.
T Consensus 233 ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~- 311 (472)
T KOG0634|consen 233 ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL- 311 (472)
T ss_pred HHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH-
Confidence 999999999999986543321 1111 011111111 123222 3566654455666654332
Q ss_pred hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH----HHHHHHHHHHhc-C
Q 010842 332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI----RLAKMFEGFVKS-D 406 (499)
Q Consensus 332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~----~~a~~l~~~L~~-~ 406 (499)
.+.+.+... +...+.-..+...-+++.++..|++|+.+.+.+.+ ..+..+...+.+ +
T Consensus 312 ~l~ril~~a------------------e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl 373 (472)
T KOG0634|consen 312 FLKRILDLA------------------EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL 373 (472)
T ss_pred HHHHHhhhc------------------ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 222221111 11111211223466788889999988877776655 344455555544 3
Q ss_pred CC--eEEEcCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--C-----CEEEEEEeccCCCCcH
Q 010842 407 PR--FEIVVPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--G-----GLYMLRFAVGASLTDE 476 (499)
Q Consensus 407 ~~--~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~-----g~~~lRi~~~~~~~t~ 476 (499)
|. +++. +|..+. ++++++-........+++.-+.+...+.+.|+.++.+..+ . ++-++|+++. ..+.
T Consensus 374 p~~~~~~~-~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a--~a~~ 450 (472)
T KOG0634|consen 374 PKSVCEYH-PPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA--FAEP 450 (472)
T ss_pred CCCeeEEe-cCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee--cCCH
Confidence 43 3444 554444 4455531100112335666667777888889866655433 1 3348999995 4677
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 010842 477 RHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~l~~~ 496 (499)
+++++.++++..++++....
T Consensus 451 e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 451 EKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 89999999998888876543
No 310
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=9.4e-12 Score=121.15 Aligned_cols=296 Identities=15% Similarity=0.119 Sum_probs=181.3
Q ss_pred HHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHHHHh--
Q 010842 133 VVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVCKLA-- 208 (499)
Q Consensus 133 ~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~~~~-- 208 (499)
++.++|+++.+ .+. .+|++||||||-.|+..||.+... ..+..|+ +...-|-...-+....
T Consensus 88 ~la~~L~~~s~~~d~---------vff~NSGaEA~EaAiKlARk~~~~------~~k~~Iia~~nsFHGRT~galS~t~~ 152 (404)
T COG4992 88 ELAEKLVELSPFADR---------VFFCNSGAEANEAALKLARKYTGD------PEKSKIIAFENSFHGRTLGALSATGQ 152 (404)
T ss_pred HHHHHHHhhCccccE---------EEEcCCcHHHHHHHHHHHHHHcCC------CCCcEEEEEcCCcCCccceeeeccCC
Confidence 34455888886 332 489999999999999999987531 1233333 3334453322221111
Q ss_pred -----CCC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCC
Q 010842 209 -----GVS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGI 277 (499)
Q Consensus 209 -----G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~ 277 (499)
+.+ ...++.||.+ |+++|+++|+++++ +|++---.-..|.+-| ++++.++|++||+
T Consensus 153 ~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~ 219 (404)
T COG4992 153 PKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEHGA 219 (404)
T ss_pred hhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHhCe
Confidence 111 1245666653 89999999999765 5555555556677633 7899999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
.++.|..+.|......-+.....++. -|.++. -|.|+..+..|.++.++. .. ..+ ...
T Consensus 220 LLI~DEVQtG~GRTGk~fA~e~~gV~-PDI~tl--aK~LgGG~PigA~la~~~-~~-~~~-------~~G---------- 277 (404)
T COG4992 220 LLILDEVQTGLGRTGKLFAYEHYGVE-PDILTL--AKALGGGFPIGAMLATEE-IA-SAF-------TPG---------- 277 (404)
T ss_pred EEEEeccccCCCccchHHHHHHhCCC-CCEEEe--eccccCCccceeeEEchh-hh-hcC-------CCC----------
Confidence 99999999886443333333333543 688776 588877788999988732 11 111 110
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPR--HFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~~ 434 (499)
.++ .+-....|...++...+..-.-++.+++..++.++|.+.|+++. .+.++.+. ..-++.+.+.+..
T Consensus 278 -~Hg--STfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~------ 348 (404)
T COG4992 278 -DHG--STFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY------ 348 (404)
T ss_pred -ccc--CCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc------
Confidence 000 01111345544444443222223456667777888888887752 12233221 2233444454320
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
....+.+.+.++|.++... +..++|+... ...+++||+..+++++++++....
T Consensus 349 ---~a~~~~~~~~~~gvL~~~a----~~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 349 ---RARDIVRALREEGVLVLPA----GPNVIRFLPP-LVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred ---cHHHHHHHHHHCCeEEecC----CCCeEEecCC-ccCCHHHHHHHHHHHHHHHHHhhh
Confidence 2467788888899554332 3358999984 778999999999999999887654
No 311
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=2.7e-10 Score=117.24 Aligned_cols=315 Identities=13% Similarity=0.062 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.|++++.-+.. ....|+++||||+..|+..||... | ++.+|......|-...-++.+
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~ls~ 161 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT-------G-RKYIIAFLGAFHGRTYGSLSL 161 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh-------C-CCeEEEECCCcCCccHHHHHh
Confidence 34555666778887742110 124899999999999999999652 1 222333344456554444443
Q ss_pred hCC----------CCCCeEEeeCCCCCCCcc-----C--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 208 AGV----------SPANIRALPTSVDANFSL-----S--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 208 ~G~----------g~~~v~~v~~~~~~~~~~-----d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
.|- ....+..+|... .++. | .+.+++.+.+....+..+.+|++--.....|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~ 239 (441)
T PRK05769 162 TASKPVQRKGFFPLMPGVIHVPYPN--PYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVP 239 (441)
T ss_pred cCCCcccccCCCCCCCCeEEeCCCc--cccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCC
Confidence 321 012345555431 1111 1 23344423221111234556666655666788888
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++ |.++..+..|+++.+++- . ..+
T Consensus 240 ~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i-~-~~~--- 311 (441)
T PRK05769 240 PKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAEL-M-FLP--- 311 (441)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhh-h-hcC---
Confidence 99999999999999999999986432211111112244 26888764 777655668888876542 1 111
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF 417 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~ 417 (499)
.... . .+. .+.+........+|+.+.. +..++..++.++|.+.|+++. .+.++.. ...
T Consensus 312 ~~~~-~-------------~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 372 (441)
T PRK05769 312 PGSH-A-------------NTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG 372 (441)
T ss_pred CCCC-C-------------CCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence 0000 0 011 1112222233344444422 566777778888888776531 1222211 122
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++.+.+.... . +........+.+.+.++|..+ .+ .+...+|++.. ...|++||+++++++.++..++
T Consensus 373 ~~~~i~~~~~~--~-~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 373 LMIGVELVKDR--K-EPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIPP-LIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEEEEEeccCC--c-cccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 34444443221 0 001234567788888899654 22 23467999884 7789999999999999988764
No 312
>PRK12403 putative aminotransferase; Provisional
Probab=99.49 E-value=1.5e-10 Score=119.65 Aligned_cols=324 Identities=12% Similarity=0.038 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC-CeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH-KLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~-~~~i~~-s~~~H~s~~ka~ 205 (499)
.....++.+.|+++++...+ ..+++++||+||..|+..||...... |.+ +.+|+. ....|-+..-++
T Consensus 97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~~~ 165 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL----GKPQKKIMIGRWNGYHGSTLAAT 165 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh----CCCCCcEEEEECCCcCcccHhhh
Confidence 34445555668888763211 24899999999999999998653111 112 333332 334477766665
Q ss_pred HHhCCC--------CCCeEEeeCCCC--CCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842 206 KLAGVS--------PANIRALPTSVD--ANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--- 264 (499)
Q Consensus 206 ~~~G~g--------~~~v~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--- 264 (499)
.+.|.. ...+..+|.... ..+.+ +.++|++.+.+.. ...+.+|++--.....|.+.|
T Consensus 166 s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~ 243 (460)
T PRK12403 166 ALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPES 243 (460)
T ss_pred hcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHH
Confidence 554431 112344442210 00011 1345665554321 133555666555556688777
Q ss_pred -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc-
Q 010842 265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP- 341 (499)
Q Consensus 265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~- 341 (499)
+++|.++|++||+.+++|.+++|+.....-+.....|+. .|.+++ -|.++..+ ..|.++++++ +.+.+....
T Consensus 244 yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~~--gK~lggG~~Piga~v~~~~--i~~~~~~~~~ 318 (460)
T PRK12403 244 YWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLSI--AKGLTSGYVPMGGLVLSKR--IAEALVEQGG 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEEE--cccccccccceEEEEECHH--HHHHHhcCCC
Confidence 999999999999999999999776432222221223554 688874 68887554 6777777643 223332111
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhc----CCCeEEEc
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDI-RLAKMFEGFVKS----DPRFEIVV 413 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~----~~~~~~~~ 413 (499)
.++.. .+.....+.+ .++|+.+-.+. .+++.. ++.++|.+.|++ .|-+.-+
T Consensus 319 ~~~~~-----------------~T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v- 377 (460)
T PRK12403 319 VFAHG-----------------LTYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEV- 377 (460)
T ss_pred ccccC-----------------CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeE-
Confidence 11111 1111223433 34444443333 345553 556666665543 3322111
Q ss_pred CCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.-...++.+.+........ .........+...+.++|.++... + ..+|++.. ...|++||+++++++.++.+
T Consensus 378 rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~Pp-l~it~~eid~~~~~l~~al~ 451 (460)
T PRK12403 378 QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----L-GRMIMAPA-LVAGRAEIDELVDKTRIAVD 451 (460)
T ss_pred eecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----C-CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 1122334444432110000 001123445667778889554321 1 23787773 55799999999999999998
Q ss_pred HHhcc
Q 010842 492 RLFKG 496 (499)
Q Consensus 492 ~l~~~ 496 (499)
++.++
T Consensus 452 ~~~~~ 456 (460)
T PRK12403 452 RTARE 456 (460)
T ss_pred HHHHH
Confidence 87654
No 313
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.49 E-value=1.1e-10 Score=117.08 Aligned_cols=317 Identities=12% Similarity=0.059 Sum_probs=195.1
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC---
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG--- 209 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G--- 209 (499)
++.+.|.+++.-+.. .-.+|+++||+||-.|+..||.... ...+|-....-|-...-++.+.|
T Consensus 103 ~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~Tg--------r~~viaf~~afHG~T~galslT~~~~ 168 (447)
T COG0160 103 ELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYTG--------RPGVIAFDGAFHGRTLGALSLTGSKP 168 (447)
T ss_pred HHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHhC--------CCcEEEECCcccccchhhHHhccCcc
Confidence 334446666543211 1248999999999999999998752 22334445555766665555443
Q ss_pred -----CC--CCCeEEeeCCCC--CCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842 210 -----VS--PANIRALPTSVD--ANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL 268 (499)
Q Consensus 210 -----~g--~~~v~~v~~~~~--~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I 268 (499)
.| ...++.+|.... +.+ .-..+.+++.|.+.......|.++++--....-|.+.| ++++
T Consensus 169 ~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l 248 (447)
T COG0160 169 PYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKAL 248 (447)
T ss_pred ccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHH
Confidence 22 124777876521 111 11334456656555555567888888887777888844 7999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
.++|++||+.+++|.++.|+.....-+..-..|+ ..|.+|++ |.++.....|.++.|.+-. ...+.-
T Consensus 249 ~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei~-----~~~~g~----- 315 (447)
T COG0160 249 RKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEIM-----DWPPGG----- 315 (447)
T ss_pred HHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHhc-----ccCCcc-----
Confidence 9999999999999999998765443333334455 48999875 7777777788888776321 111100
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCc--eEEEEEec
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHF--ALVCFRLN 425 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~--~~v~f~~~ 425 (499)
..++-+...+.+.+++..+..-.-+.++++..++-+++.+.|.++. .+.++.+.+. -.+.+.+.
T Consensus 316 -------------~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v 382 (447)
T COG0160 316 -------------HGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELV 382 (447)
T ss_pred -------------cCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEe
Confidence 1111222344444444444222222577778888888888887532 2334444321 23333333
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+. .+.+...+...++.+++.++|.++.+.... .+++|+..- ...+++++|..++.|.++.++.
T Consensus 383 ~d~-~t~~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~PP-L~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 383 KDR-DTKEPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILPP-LTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cCC-CCCCCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence 221 011122467889999999999866554322 367999883 6679999999999999987764
No 314
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=1.9e-10 Score=117.21 Aligned_cols=306 Identities=11% Similarity=0.070 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCe-EEEcCCCCchhHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKL-VVYGSDQTHSTFAKVC 205 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~-~i~~s~~~H~s~~ka~ 205 (499)
....++.+.|+++.+..+ ...|+++||+|+..|+..||...... |. .+. +|......|-...-+.
T Consensus 82 ~~~~~la~~L~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~~~~~----g~~~~r~~ii~~~~~yHG~t~~~~ 149 (408)
T PRK04612 82 APPLKLAEELVTASRFAE--------KVFLCNSGTEANEAAIKLVRKWASSQ----GRPADKRVIVTFRGSFHGRTLAAV 149 (408)
T ss_pred HHHHHHHHHHHhhCCCCC--------EEEEcCchHHHHHHHHHHHHHHHHhh----CCCCCCcEEEEECCCcCCccHHHH
Confidence 344455666777764322 24899999999999999999753211 21 133 3444444565544444
Q ss_pred HHhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-C----ChhHHHHH
Q 010842 206 KLAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-D----NVEPLAEV 271 (499)
Q Consensus 206 ~~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d----~l~~I~~i 271 (499)
...|-.. ..++.+|. -|++.|++.+.. ..+. .+..-|...+|.+ . -+++|.++
T Consensus 150 s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~a-avi~eP~~~~gg~~~~~~~~l~~l~~l 216 (408)
T PRK04612 150 TATAQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVA-AVMLEPIQGEGGVMPAAPGFLARVRAL 216 (408)
T ss_pred HhcCCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEE-EEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 4433210 01122221 278888887742 2233 4444444445544 3 28999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
|++||+++++|.+|.++.....-+.....++ ..|.+++ -|.++..+..|+++.+++ +.+.+... . ..
T Consensus 217 ~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~--~~~~~~~~---~-~~---- 283 (408)
T PRK04612 217 CDQHDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK--VAETMQFG---A-HG---- 283 (408)
T ss_pred HHHcCCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH--HHhhhcCC---C-cC----
Confidence 9999999999999987433211111111122 2466655 688875566888877643 22333211 0 00
Q ss_pred CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEEEecCCC
Q 010842 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCFRLNPYP 428 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~~~~~~ 428 (499)
.+. .+.+..+.....+|..+-. .++.++..++.+++.+.|+++. .+.++. .....++.+.+.+..
T Consensus 284 --------~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~ 351 (408)
T PRK04612 284 --------TTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH 351 (408)
T ss_pred --------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch
Confidence 011 1222223333344444422 3566777777888888776642 122221 122334444443211
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
......+.+.+.++|..+.. .+...+|++. +...|++||++++++|.+...++.++
T Consensus 352 -------~~~a~~i~~~l~~~Gvlv~~----~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~~ 407 (408)
T PRK04612 352 -------AGQAGAILDLAAEHGLLLLQ----AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVAQ 407 (408)
T ss_pred -------hhHHHHHHHHHHHCCeEEee----CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 12346677888888965432 2446799988 47789999999999999998877653
No 315
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.48 E-value=4.6e-11 Score=117.62 Aligned_cols=310 Identities=16% Similarity=0.107 Sum_probs=184.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
.+++|-++.+.++++++.-+- .-|+++||||++.|++.||.... ++.+|-.....|-+.....-
T Consensus 91 Pte~Ei~~Aell~~~~p~~e~--------vrfvnSGTEAtmsAiRlARa~Tg--------R~kIikF~G~YHG~~D~~lv 154 (432)
T COG0001 91 PTELEVELAELLIERVPSIEK--------VRFVNSGTEATMSAIRLARAYTG--------RDKIIKFEGCYHGHSDSLLV 154 (432)
T ss_pred CCHHHHHHHHHHHHhcCcccE--------EEEecchhHHHHHHHHHHHHhhC--------CCeEEEEcCCCCCCccHHHh
Confidence 367888888889999876332 37999999999999999997541 22233344555655444433
Q ss_pred HhCCC----------------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hh
Q 010842 207 LAGVS----------------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VE 266 (499)
Q Consensus 207 ~~G~g----------------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~ 266 (499)
-.|-| ...++.+|.+ |++.|++++++. |..+.+|++--.-.+.|.|.| ++
T Consensus 155 ~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~ 224 (432)
T COG0001 155 KAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLE 224 (432)
T ss_pred hcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHH
Confidence 32211 1134445543 899999998764 344566776666667888855 68
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLK 345 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~ 345 (499)
++.++|+++|+.|+.|...-|+-+.. .-.....|++ .|..|+ -|.++....+|++-.|.+ .+ +.+.. .+-|..
T Consensus 225 ~Lr~lt~e~G~lLI~DEViTGFR~~~-gGaq~~~gi~-PDlttl--GKiIGGGlP~ga~gGr~e-iM-~~~~p~g~vyqa 298 (432)
T COG0001 225 GLRELTEEHGALLIFDEVITGFRVAL-GGAQGYYGVE-PDLTTL--GKIIGGGLPIGAFGGRAE-IM-EQLAPLGPVYQA 298 (432)
T ss_pred HHHHHHHHcCcEEEEecchhhcccCC-cccccccCcC-cchhhh--hhhhcCCcceeeeccHHH-HH-hhhCCCCCcccc
Confidence 89999999999999999987764321 1112233443 677765 588888888898877653 22 21111 111111
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcH-HH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEE
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGV-LN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALV 420 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~-~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v 420 (499)
++-....+.+.+ +++.+-. ++ ++.+.+...++++-+.+.+.+. ++.+......+.+
T Consensus 299 ------------------GT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~ 359 (432)
T COG0001 299 ------------------GTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMF 359 (432)
T ss_pred ------------------CCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceE
Confidence 111223444443 4444432 22 4555444455555555555554 5544333334555
Q ss_pred EEEecCCCCCC--c---chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 421 CFRLNPYPHSG--S---ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 421 ~f~~~~~~~~~--~---~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
++.+.+..... + .+.. ...++...|.++|+ ++.+..+.. .+.+..+|++||++.++++.++.+++..
T Consensus 360 ~i~F~~~~~~n~~da~~sd~~-~~~~~~~~~l~~GV-~l~ps~~ea------~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 360 GIFFTEEGVRNYADAKRSDVE-RFAKFFHHLLNRGV-YLAPSQFEA------GFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred EEEecCCCCCCHHHHHhhchH-HHHHHHHHHHhCCc-ccCCccccc------eeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 55554422111 0 1122 23445558888884 566654332 2234668999999999999998887754
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.6e-10 Score=115.46 Aligned_cols=320 Identities=12% Similarity=0.058 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|+++++...+ ...|+++||||+..|+..||... | ++.++-....-|-...-+....
T Consensus 84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~ 148 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT-------K-RRKILSYLRSYYGSTYGAMSLT 148 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc-------C-CCeEEEEeCCcCCcCHHHHHhc
Confidence 3445555668888754322 25899999999999999998652 1 2223333334455444444433
Q ss_pred CCC---------CCCeEEeeCCCCCC--Cc--------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----h
Q 010842 209 GVS---------PANIRALPTSVDAN--FS--------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----V 265 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l 265 (499)
|.. ...+..+|...... +. -+.+.+++.++... .+..+.+|++.-..+++|.+-| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l 227 (443)
T PRK08360 149 GLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYF 227 (443)
T ss_pred CCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHH
Confidence 321 12345555432100 10 12344555554321 1234566666655578888754 8
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
++|.++|++||+++++|.+|.++.....-+.....++ ..|.+++ -|.++..+..|+++.+.+ +.+.+... .+.
T Consensus 228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~--i~~~~~~~-~~~- 300 (443)
T PRK08360 228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE--IMDSLPPL-AHA- 300 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH--HHhhhcCC-CCC-
Confidence 9999999999999999999987533221111111243 2577766 798886566888887643 22333210 000
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEE
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCF 422 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f 422 (499)
.+. .+.+........++..+..+ +..++..++.+++.+.|+++. ...++. .....++.+
T Consensus 301 --------------~T~-~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gi 362 (443)
T PRK08360 301 --------------FTL-SGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGV 362 (443)
T ss_pred --------------CCC-CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEE
Confidence 001 11111222333444444322 345666677777777765431 111121 123334444
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+..... ...........+..++.++|.++ .+. +...+|++.. ..+|++||+++++++.++.+++.+
T Consensus 363 e~~~~~~-~~~~~~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P~-l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 363 DLVKDRE-TKERAYEEAAKVVWRAWELGLIV-TFF---SGNVLRIQPP-LTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred EEecCCc-ccCccHHHHHHHHHHHHHCCeEE-eec---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4432110 00001233567888888999543 221 2356999884 788999999999999999887643
No 317
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=3e-10 Score=117.19 Aligned_cols=322 Identities=13% Similarity=0.076 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.+...++.+.|++++..... ...+|+++||+|+..|+..||... | ++.+|.....-|-...-+..+
T Consensus 98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~al~~ 163 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT-------G-RQAVVVFDHAYHGRTNLTMAL 163 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCcChHHHHhh
Confidence 34555666778888753211 024889999999999999998652 1 222333444456555555443
Q ss_pred hCC--------C--CCCeEEeeCCCC-CC---CccCH-HHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----hh
Q 010842 208 AGV--------S--PANIRALPTSVD-AN---FSLSP-QLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----VE 266 (499)
Q Consensus 208 ~G~--------g--~~~v~~v~~~~~-~~---~~~d~-~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l~ 266 (499)
.+. + ...+..+|.... .. ...+. +.+++.++.-.+ .+..+.+|++.-.....|.+-| ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~ 243 (443)
T PRK06058 164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP 243 (443)
T ss_pred cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 331 1 113344442210 00 01111 222222221111 1233555554444444455543 99
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN 346 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~ 346 (499)
+|.++|++||+.+++|.++.|+......+.....++ ..|.+++. |.++..+..|+++.+++ +.+.+... ..
T Consensus 244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~--i~~~~~~~--~~-- 314 (443)
T PRK06058 244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE--IMDAPHPG--GL-- 314 (443)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH--HHhhccCC--CC--
Confidence 999999999999999999987643222222222344 36888884 98876677888888653 22222110 00
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEEE
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCFR 423 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~ 423 (499)
..+-....+...+++..+..-.-++..++..++.++|.+.|+++. ...++. .....++.+.
T Consensus 315 ----------------~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~ 378 (443)
T PRK06058 315 ----------------GGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378 (443)
T ss_pred ----------------CCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEE
Confidence 011122344445554444211112456667777778887776631 122221 2333444555
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+.. ...........+.+.+.++|.++.....+ + .++|+... ...|++||++++++|.++.+++
T Consensus 379 ~~~~~--~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~-~-~~lr~~Pp-l~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 379 LVKPG--TTEPDAELTKALAAAAHAAGVIVLTCGTY-G-NVIRLLPP-LVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EecCC--CCCCcHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CccCHHHHHHHHHHHHHHHHhC
Confidence 53321 00111245677888888999654322222 2 47999874 6789999999999999987653
No 318
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.46 E-value=2.8e-10 Score=116.24 Aligned_cols=311 Identities=14% Similarity=0.073 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
++...++.+.|++++..|... .....| +++||||+..|+..||... | ++.+|-....-|-...-+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT-------G-RSNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc-------C-CCeEEEECCCcCCchHHHHH
Confidence 445555666677765222110 001245 5899999999999998652 1 22233344455655444444
Q ss_pred HhCC-------C--CCCeEEeeCCCCCCC-ccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHH
Q 010842 207 LAGV-------S--PANIRALPTSVDANF-SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVA 272 (499)
Q Consensus 207 ~~G~-------g--~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia 272 (499)
..|. | ...+..+|....... .-+++.+++.+++.......+.+|++--...+.|.+ +-+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 3321 1 124455554310000 124677888875432111234555555444556664 4489999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
++||+++++|+++.|+......+.....++ ..|.++++ |+++. .+..|++++++.. ..+. .. ...
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~-~~~----- 290 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PG-EHN----- 290 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CC-ccC-----
Confidence 999999999999986532211111112344 37888775 99876 6778999987642 2221 00 000
Q ss_pred CCcccCCCcccCCCCCCCcH---HHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEE
Q 010842 352 NSVVDFKDWQVGTGRRFKSL---RLWMVLRS-YGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFR 423 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al---~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~ 423 (499)
.+-....+ ...+++.. +..+. ..++..++.+++.+.|+ ..|++..-......++.+.
T Consensus 291 ------------~T~~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~ 355 (412)
T TIGR02407 291 ------------GTFRGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIE 355 (412)
T ss_pred ------------CCCCccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEE
Confidence 01111233 23444553 33333 34445555566655554 3443321112223344555
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
+.+ .....++.+.+.++|..+. +... +...+|++. ....|++|+++++++|.+..+
T Consensus 356 l~~---------~~~~~~~~~~~~~~Gv~v~-~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 356 CGD---------GDLAGKIAKAAFENGLIIE-TSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred ecC---------hHHHHHHHHHHHHCCCEEe-ccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 543 2345678888889996543 2211 235699998 488999999999999998764
No 319
>PRK06541 hypothetical protein; Provisional
Probab=99.45 E-value=5.1e-10 Score=115.66 Aligned_cols=331 Identities=11% Similarity=0.029 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+.|++++.-+.+ ...|+++||+|+..|+..||...... +..+ +..+|......|-...-+....
T Consensus 95 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 165 (460)
T PRK06541 95 PPAIELAERLAALAPGDLN-------RVFFTTGGSEAVESAWKLAKQYFKLT-GKPG-KHKVISRAIAYHGTTQGALAIT 165 (460)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCcccCcchhhhcCc
Confidence 3444455557777642211 34899999999999999998753211 0000 1223344444565544444333
Q ss_pred CCC---------CCCeEEeeCCCCCC---CccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 209 GVS---------PANIRALPTSVDAN---FSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~---~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
|.. ...+..+|...--. +.-+ ++.|++.++.. ....+.+|++.-...+.|.+-|
T Consensus 166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence 221 11234454331000 1112 25566666431 1234555555555677888888
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc-c
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP-E 342 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~-~ 342 (499)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ ..|.++.+++. . ..+.... .
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt~--gK~l~~G~~pigav~~~~~i-~-~~~~~~~~~ 318 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIITC--AKGITSGYSPLGAMIASDRL-F-EPFLDGPTM 318 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEEe--cccccCCccceeEEEEcHHH-H-HHhhcCCCc
Confidence 99999999999999999999965532222111112344 3787774 68887544 57888776542 2 2222111 1
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEE
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALV 420 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v 420 (499)
++.. .+.....+.+.+++..+..-.-+...++..++.++|.+.|+++....++. .....++
T Consensus 319 ~~~~-----------------~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~ 381 (460)
T PRK06541 319 FLHG-----------------YTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFY 381 (460)
T ss_pred cccC-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence 1110 11112234444444443211112355777788888888887753222211 1222334
Q ss_pred EEEecCCCC----CCcchhHH-HHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 421 CFRLNPYPH----SGSADTEM-LNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 421 ~f~~~~~~~----~~~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+.+..... ......+. ....+.+.+.++|.++ .+. ..+...+|++.. ..+|++|||+++++|.++..++.+
T Consensus 382 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 382 GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 444432110 00111111 2246778888888543 332 124467999884 778999999999999999887654
No 320
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.45 E-value=2.7e-10 Score=117.16 Aligned_cols=317 Identities=13% Similarity=0.088 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
...++.++|++..+.+.. ...+++++|++|+..|+..+|.... ++.+|.++..-|-...-+....+
T Consensus 85 ~~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~~--------r~~iv~~~~~yHG~~~~~~~~~~ 150 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAATK--------RSGVIAFTGAYHGRTHYTLALTG 150 (425)
T ss_pred HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHhC--------CCeEEEECCccCCccHHHHHhhC
Confidence 334666778887764321 1248899999999999999986531 23345556556666544433322
Q ss_pred C--------C--CCCeEEe--eCCCCCCCcc--CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHH
Q 010842 210 V--------S--PANIRAL--PTSVDANFSL--SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEV 271 (499)
Q Consensus 210 ~--------g--~~~v~~v--~~~~~~~~~~--d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~i 271 (499)
- + ...+..+ |.+.++ ... +++.|++.++... .+..+.+|++.-.....|.+-+ +++|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l 228 (425)
T PRK08088 151 KVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRAL 228 (425)
T ss_pred CCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHH
Confidence 1 0 1122222 222211 111 1456777775321 2234555555554455566655 8999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
|++||+++++|.+|+++... +..... ..++ ..|. .+.-|.++..+..|+++.+.+ +.+.+.... + .
T Consensus 229 ~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~--~~~~~~~~~-~--~---- 295 (425)
T PRK08088 229 CDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE--VMDAIAPGG-L--G---- 295 (425)
T ss_pred HHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH--HHhhcCCCC-C--C----
Confidence 99999999999999874322 111110 1222 2454 445799876677888887543 222222110 0 0
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEEecC
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFRLNP 426 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~ 426 (499)
.+-....+...+++..+..-..++.+++..++.+++.+.|. ..|.+.-+..+ ...+.+.+..
T Consensus 296 -------------~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~ 361 (425)
T PRK08088 296 -------------GTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFE 361 (425)
T ss_pred -------------CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEec
Confidence 01111234444444443222223444455555555554443 34443333223 3345555532
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
... ...........+..++.++|..+.....+ ..++|+++. ...|+++|++.++.|.++..++
T Consensus 362 ~~~-~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 362 DGD-HSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCC-CCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHHHhh
Confidence 110 00001244677888888999765432222 257999994 6788999999999999987653
No 321
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.45 E-value=5.4e-11 Score=122.45 Aligned_cols=308 Identities=14% Similarity=0.076 Sum_probs=157.9
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHHHHhCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVCKLAGV 210 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~~~~G~ 210 (499)
.++.+.+++.+...+. .++++|||+|+..|+..||... ++..|++... -|-....+....+.
T Consensus 91 ~~lae~l~~~~~~~~~--------v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~ 153 (423)
T TIGR00713 91 ILLAKEIISRVPSVEM--------VRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGS 153 (423)
T ss_pred HHHHHHHHHhCCcccE--------EEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccC
Confidence 3344446666643332 4899999999999999998753 2233444444 44433322222121
Q ss_pred CCCCeEEeeCCCC-------CCC---ccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCC----hhHHHHHHHHh
Q 010842 211 SPANIRALPTSVD-------ANF---SLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDN----VEPLAEVANEY 275 (499)
Q Consensus 211 g~~~v~~v~~~~~-------~~~---~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~----l~~I~~ia~~~ 275 (499)
|... ...|..+. ..+ ..|+++|++.+++. +..+.+|++. ..++ +|.+.| +++|.++|++|
T Consensus 154 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~ 228 (423)
T TIGR00713 154 GAAT-LGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY 228 (423)
T ss_pred cccc-cCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh
Confidence 1101 00010000 000 12899999988632 2234455554 4444 788866 79999999999
Q ss_pred CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
|+++++|.+|.++ ...........++ ..|.++ .-|.++..+..|+++.+++ +.+.+.....+...
T Consensus 229 ~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~~~~~~~--------- 293 (423)
T TIGR00713 229 GSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE--IMERLAPEGPVYQA--------- 293 (423)
T ss_pred CCEEEEEcccccc-ccCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH--HHHhhCcCCCeeec---------
Confidence 9999999999776 3211111112233 256554 5788875566788877643 22333211000000
Q ss_pred cCCCcccCCCCCCCcHHHHH---HHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCC
Q 010842 356 DFKDWQVGTGRRFKSLRLWM---VLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~---~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 431 (499)
.+-....+.+.+ ++..+..++ ++...+....+.+.+.+.+++. ++..-......++.+.+.......
T Consensus 294 --------~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~ 364 (423)
T TIGR00713 294 --------GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTN 364 (423)
T ss_pred --------cCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCC
Confidence 011112333333 444432222 2333333333444455555555 332211122234443333211000
Q ss_pred --c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 432 --S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 432 --~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+ ..-......+.+.+.++|.+ +.+.. ...+|++.. .|++||++++++|.++.++
T Consensus 365 ~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~l~~~---~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 365 YADAKKSDTELFAKFFHEMLDKGVF-LPPSQ---FEACFLSAA---HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred hhhhhcccHHHHHHHHHHHHHCCeE-EecCC---ccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence 0 00012345678888888854 44322 234777653 6899999999999988765
No 322
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.45 E-value=1.4e-11 Score=120.38 Aligned_cols=220 Identities=16% Similarity=0.167 Sum_probs=157.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch---
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS--- 199 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~--- 199 (499)
..|-...+|.. ++++-|.+.. +.+++|..|...++..... .+..|++....+.
T Consensus 75 ~nPt~~~le~~----iaal~ga~~~---------l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~ 130 (409)
T KOG0053|consen 75 GNPTRDVLESG----IAALEGAAHA---------LLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTL 130 (409)
T ss_pred CCCchHHHHHH----HHHHhCCceE---------EEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHH
Confidence 35666777777 8999988764 7888887777777776542 3445555544443
Q ss_pred -hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 200 -TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 200 -s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
-+.+....+|+ ....++++ |++++++++.++++ +|..-.|+||++.+-||++|+++||++|+.
T Consensus 131 ~~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~ 194 (409)
T KOG0053|consen 131 RILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFL 194 (409)
T ss_pred HHHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCE
Confidence 35555667788 77777654 67888888888665 899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++||..+++.... + .+-- +||.++-+..||+++.-. .|++..+..+..++..... .++
T Consensus 195 vvVDnTf~~p~~~-~---pL~l---GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~l------------ 254 (409)
T KOG0053|consen 195 VVVDNTFGSPYNQ-D---PLPL---GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDL------------ 254 (409)
T ss_pred EEEeCCcCccccc-C---hhhc---CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHh------------
Confidence 9999999887332 1 1212 399999999999987644 5666666444332222111 122
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
+.-..++.+|..+|-+ +.+.-++++..+++..+++.|++.|.++-+
T Consensus 255 --------g~~~~p~~~~ll~Rgl--ktl~lRi~~~~ena~~~A~~Le~~~~v~kv 300 (409)
T KOG0053|consen 255 --------GWCEDPFDLFLLSRGL--KTLHLRINKHSENALKIALLLEAHPKVKKV 300 (409)
T ss_pred --------cCCCCHHHHHHHhcCc--chhhhhHHHHHHHHHHHHHHhhhCCceeEE
Confidence 2223466777766644 666778889999999999999999888733
No 323
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.43 E-value=9.8e-11 Score=116.21 Aligned_cols=331 Identities=12% Similarity=0.047 Sum_probs=184.9
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
.-..|..+|....||+. ++++||++.. ++|..|+.++..+..+.......+. |.....-+++..
T Consensus 66 GDD~Y~gdpSv~~Lee~----vael~G~E~a---------lpthqGRgaE~Il~~~~~~~~g~e~---g~~~~~~~v~hn 129 (467)
T TIGR02617 66 GDEAYSGSRSYYALAES----VKNIFGYQYT---------IPTHQGRGAEQIYIPVLIKKREQEK---GLDRSKMVAFSN 129 (467)
T ss_pred CCcccccCchHHHHHHH----HHHHhCCceE---------EECCCCchHHHHHHHhhcccccccc---cccccccccceE
Confidence 34578899999999988 8889999864 8898889998887765532100000 000001133445
Q ss_pred CchhHH-HHHHHhCCCCCCeEEeeCC--------CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-ccccc---C
Q 010842 197 THSTFA-KVCKLAGVSPANIRALPTS--------VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAV---D 263 (499)
Q Consensus 197 ~H~s~~-ka~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~i---d 263 (499)
.|+-.. -.+.+.|. .++.++.+ ..-.+.+|+++|+++|++... ...++ +..+..+| .-|.+ +
T Consensus 130 ~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~-v~~tlt~N~~GGqpvsle 204 (467)
T TIGR02617 130 YFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPY-IVATITCNSAGGQPVSLA 204 (467)
T ss_pred EEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCcee-eeeeEEEecCCCEEeCHH
Confidence 566543 45667787 66665432 111248999999999976421 12333 33333233 34544 6
Q ss_pred ChhHHHHHHHHhCCEEEeeccccch-hccCcc---------chhhh-cCCCCCceeEecccccccCCCcceEEEEeCc--
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGS-ACICPE---------FRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-- 330 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~-~~~~~~---------~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-- 330 (499)
.+.++.++|++||+.+|.|||--.- +.+... .+... .-...+|+++++..|.+++|.| |++..+++
T Consensus 205 nlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~ 283 (467)
T TIGR02617 205 NLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSF 283 (467)
T ss_pred HHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhH
Confidence 6788999999999999999974221 211100 01111 0124699999999999999965 55666666
Q ss_pred -hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH-HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842 331 -GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL-WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR 408 (499)
Q Consensus 331 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~-~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 408 (499)
+.+.+.-.....|= .+..|+ |...+-+.. ...|.- .--..++++.....+||.+.|.+. |
T Consensus 284 ~~l~~~~~~~~i~~E-----------Gf~tYG---Glagrd~ea~a~Gl~e---~~~~~yl~~ri~qv~yl~~~L~~~-G 345 (467)
T TIGR02617 284 FDVYTECRTLCVVQE-----------GFPTYG---GLEGGAMERLAVGLYD---GMNLDWLAYRINQVQYLVNGLEEI-G 345 (467)
T ss_pred HHHHHHHHhhccccc-----------CCcCcC---chhHHHHHHHHhhhhh---cccHHHHHHHHHHHHHHHHHHHhC-C
Confidence 43333222222111 111121 211121211 112221 122466777788889999999886 7
Q ss_pred eEEEcCCCceEEEEE---ecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-------C------CEEEEEEeccC
Q 010842 409 FEIVVPRHFALVCFR---LNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV-------G------GLYMLRFAVGA 471 (499)
Q Consensus 409 ~~~~~~~~~~~v~f~---~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~------g~~~lRi~~~~ 471 (499)
+.++. +...-|.+. +.|.-+. ...-.+.|...|. +.|+=-+--+.+ . .-..+|+++--
T Consensus 346 vpi~~-~Gghav~iDa~~~lphip~----~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR 420 (467)
T TIGR02617 346 VVCQQ-AGGHAAFVDAGKLLPHIPA----DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR 420 (467)
T ss_pred CcEEe-cCccEEEEehhhhCCCCCh----hhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc
Confidence 77765 443333231 1111000 0112344544443 334311111111 1 12579999853
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~ 492 (499)
-.-|.+++|.+.+++..+.++
T Consensus 421 rvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 421 ATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccccHhHHHHHHHHHHHHHhh
Confidence 344899999999999988764
No 324
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.43 E-value=1.1e-09 Score=112.32 Aligned_cols=311 Identities=15% Similarity=0.082 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC-
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG- 209 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G- 209 (499)
+.++.+.|++++.-+.. ...+|+++||+|+..|+..||... | ++.+|.....-|-...-++.+.|
T Consensus 78 ~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~~~ 143 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT-------G-RPGVVAFDHGFHGRTNMTMALTAK 143 (420)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc-------C-CCcEEEECCCcCCCcHHHHHhcCC
Confidence 34455567777632110 124899999999999999998752 1 22234445555655544444322
Q ss_pred -------CC--CCCeEEeeCCCCC---------CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 210 -------VS--PANIRALPTSVDA---------NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 210 -------~g--~~~v~~v~~~~~~---------~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
.+ ...+..+|..... .+.-+++.+++.+.... .+..+.+|++--....+|.+-| +++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~ 222 (420)
T TIGR00700 144 VMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPA 222 (420)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHH
Confidence 11 1234445442100 00112456666654211 2234556666655556777755 899
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
|.++|++||+++++|.+|.++.....-+.....++ ..|.++ .-|.++..+..|+++.+++ +.+.+... ..
T Consensus 223 l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~--i~~~~~~~--~~--- 292 (420)
T TIGR00700 223 LLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE--IMDAPAPG--GL--- 292 (420)
T ss_pred HHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH--HHhhcCCC--Cc---
Confidence 99999999999999999987643221111111232 377666 5788876677888887653 22222210 00
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEE
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALV 420 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v 420 (499)
..+-....+...++ +..+..+.+. ++..++.+++.+.|+ ..|.+.-+ .+...++
T Consensus 293 ---------------~~T~~~~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~ 353 (420)
T TIGR00700 293 ---------------GGTYAGNPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMI 353 (420)
T ss_pred ---------------CCCCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEE
Confidence 00111224444444 4444444433 333444444444443 34444333 2334455
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+.+.+.. ..........++.+.+.++|..+.....+ + .++|+++. ...++++|++++++|.++.
T Consensus 354 ~i~~~~~~--~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-~-~~lRl~p~-l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 354 AVELVDPG--TTEPDAGLAERIATAAHAAGLLLLTCGMF-G-NIIRFLPP-LTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEEEecCC--CCCccHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CCcCHHHHHHHHHHHHHHh
Confidence 55553221 00112345677888888899665443322 2 57999873 4478999999999998875
No 325
>PLN00144 acetylornithine transaminase
Probab=99.41 E-value=7.4e-10 Score=112.11 Aligned_cols=300 Identities=15% Similarity=0.076 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-----CCeEEEcCCCCchhHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-----HKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-----~~~~i~~s~~~H~s~~k 203 (499)
..+.++.+.|+++.+.+. ..++++||||+..|+..||..........+. +..+|......|-...-
T Consensus 57 ~~~~~la~~l~~~~~~~~---------v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~ 127 (382)
T PLN00144 57 IPQVELAKRLVASSFADR---------VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG 127 (382)
T ss_pred HHHHHHHHHHHhcCCCCe---------EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHH
Confidence 344455566777664332 4899999999999999998753221000000 12234445455655444
Q ss_pred HHHHhCCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHH
Q 010842 204 VCKLAGVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAE 270 (499)
Q Consensus 204 a~~~~G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~ 270 (499)
+....+-. ...+..+|. -|+++|++.+.. ..+.+|++.-..++.|.+ ++ +++|.+
T Consensus 128 ~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~ 195 (382)
T PLN00144 128 ALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRA 195 (382)
T ss_pred HHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 44433321 112233332 178899887742 234455555445554443 44 899999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
+|++||+++++|.++.++......+.....++. .|.+++ -|.++..+..|+++.+++ +.+.+... ..
T Consensus 196 l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~-PDi~t~--sK~l~~G~pig~v~~~~~--~~~~~~~~---~~----- 262 (382)
T PLN00144 196 LCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVE-PDIMTL--AKPLAGGLPIGAVLVTEK--VASAINPG---DH----- 262 (382)
T ss_pred HHHHcCCEEEEechhhCCCccchHhhhhhcCCC-CCEEEe--cccccCCcceEEEEEcHH--HHhccCCC---CC-----
Confidence 999999999999999876432211111123442 675554 698876677888888643 22222110 00
Q ss_pred CCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHH----HHhcCCCeEEEcCCCceEEEEE
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEG----FVKSDPRFEIVVPRHFALVCFR 423 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~----~L~~~~~~~~~~~~~~~~v~f~ 423 (499)
..+.....+.+ .+++..+-...+. ++..++.+++.+ .+.+.|.+.-+.. ....+.+.
T Consensus 263 ------------~~T~~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~ 326 (382)
T PLN00144 263 ------------GSTFAGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQ 326 (382)
T ss_pred ------------CCCCCCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEE
Confidence 01111223333 3444555333333 334444444444 4444543322212 33344445
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+... ...+...+.++|..+... ....++|+++. ...++++|+.+++.|.++..++
T Consensus 327 l~~~-----------~~~~~~~~~~~Gv~i~~~---~~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 327 LDVP-----------AGPLVDACRDSGLLVLTA---GKGDVVRLVPP-LVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ecCc-----------cHHHHHHHHHCCeEEeec---CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHhc
Confidence 4211 246778888889654332 11367999984 5578999999999999987653
No 326
>PRK07678 aminotransferase; Validated
Probab=99.41 E-value=1.9e-09 Score=111.25 Aligned_cols=327 Identities=13% Similarity=0.075 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
+.+.++.+.|+++++.... ..|+++||+|+..|+..||...... +..+ ++.+|-.....|-...-+....
T Consensus 89 ~~~~~lae~l~~~~~~~~~--------v~f~~sGseA~e~AlklAr~~t~~~-g~~~-r~~ii~~~~~yHG~t~~als~~ 158 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEYV--------IFFSNSGSEANETAFKIARQYHAQK-GEPH-RYKFISRYRAYHGNSMGALAAT 158 (451)
T ss_pred HHHHHHHHHHHHhCCCCCE--------EEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhhcC
Confidence 3444556668887754322 4899999999999999999754211 1001 1223333444565544444333
Q ss_pred CCC---------CCCeEEeeCCCCCCCcc---------CH---HHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842 209 GVS---------PANIRALPTSVDANFSL---------SP---QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--- 264 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~~~~---------d~---~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--- 264 (499)
|.. ...+..+|... .++. |. +.+++.|+.. .+..+.+|++--.....|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~ 234 (451)
T PRK07678 159 GQAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQD 234 (451)
T ss_pred CCcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHH
Confidence 210 11334444321 1121 11 2345555421 1234555665554445677744
Q ss_pred -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc
Q 010842 265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
++++.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++.. +..|.++++++- .+.+.....
T Consensus 235 fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~i--~~~~~~~~~ 309 (451)
T PRK07678 235 YMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKEI--YEAFKGKGE 309 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHHH--HHHHhccCc
Confidence 89999999999999999999876643221111122455 3898887 5887655 368888887642 233322111
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCC
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPR 415 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~ 415 (499)
+- .+....+-...++.+.++ |..+..+ .+.++..++.++|.+.|++ .|.+.-+ .-
T Consensus 310 ~~--------------~~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-rg 371 (451)
T PRK07678 310 YE--------------HFRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-RG 371 (451)
T ss_pred cc--------------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-Ee
Confidence 00 000011112233444444 4444333 3556666677777766643 3322111 11
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...++.+.+..+.............++...+.++|.++.... ...+...+|++.. ..+|++|||++++++.++.+++
T Consensus 372 ~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Pp-l~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 372 KGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPP-LVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred eceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhc
Confidence 223334444321100000012345678888999996543211 1123467999884 6789999999999999988765
No 327
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.41 E-value=9.5e-10 Score=113.14 Aligned_cols=322 Identities=15% Similarity=0.158 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|++++.-..+ ...|+++||||+-.|+..||...... +. +.+.-+|.....-|-...-+..+.
T Consensus 89 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~-~~r~~ii~~~~~yHG~t~gals~t 159 (442)
T PRK13360 89 PKAFELANRIAEIAPGGLN-------HVFFTNSGSESVDTALKIALAYHRAR-GE-GSRTRLIGRERGYHGVGFGGISVG 159 (442)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-CCCcEEEEEcCCcCCccHhhhhcc
Confidence 3444566668777631111 24899999999999999999753211 00 001223333444455433333222
Q ss_pred CC-------C--CCCeEEeeCCCC---CCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 209 GV-------S--PANIRALPTSVD---ANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 209 G~-------g--~~~v~~v~~~~~---~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
|. + ...+..+|...+ ..+.. ..++|++.+... ....+.+|++--.....|.+-|
T Consensus 160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f 237 (442)
T PRK13360 160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY 237 (442)
T ss_pred CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 21 1 113444554311 00111 245777777532 1234556666666666788888
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc-
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE- 342 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~- 342 (499)
+++|.++|++||+++++|.++.|+.....-+.....++. .|.+++ -|.++.. +.+|.++.+++ +.+.+...+.
T Consensus 238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PDivt~--gK~l~gG~~P~gav~~~~~--i~~~~~~~~~~ 312 (442)
T PRK13360 238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT-PDLLTC--AKGLTNGAIPMGAVFVSSE--IHDAFMQGPEA 312 (442)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC-Cceeee--eeccccCccceEEEEEcHH--HHHHhhcCCcc
Confidence 999999999999999999999655322211111223443 787766 6887543 34667776653 2233322111
Q ss_pred ---CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-c-
Q 010842 343 ---YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-F- 417 (499)
Q Consensus 343 ---yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~- 417 (499)
++.. .+.. +.+.......++++.+..+ ...++..++.+++.+.|+++..+..+.+.. .
T Consensus 313 ~~~~~~~-------------~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G 375 (442)
T PRK13360 313 GIEFFHG-------------YTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLG 375 (442)
T ss_pred ccccccC-------------CCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence 1100 1111 2222233334445555333 355677777888888887643222221111 1
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
....+.+.+... . ......++..++.++|... .. .+ ..+|++.. ...|++|||+++++|.++.+++
T Consensus 376 l~~~~~l~~~~~-~---~~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 376 LVGAVELAPRDG-K---PGKRAYEVFLKCFEKGLMI-RY---TG-DILALSPP-LIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred eEEEEEEecCCC-C---cchhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-CccCHHHHHHHHHHHHHHHHHh
Confidence 112233322110 0 0122456777888889543 22 12 46999973 7789999999999999988765
No 328
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=2.1e-10 Score=117.85 Aligned_cols=309 Identities=13% Similarity=0.064 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+++++++.... ..++++|||+||..|+..++... | ++.+|.....-|-...-+....
T Consensus 90 ~~~~~la~~L~~~~~~~~--------~v~~~~sGseA~e~Aik~a~~~~-------g-~~~ii~~~~~yHG~t~~~~~~~ 153 (426)
T PRK00062 90 ELEVELAELVIELVPSIE--------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADSLLVKA 153 (426)
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEecCHHHHHHHHHHHHHHHh-------C-CCeEEEEcCccCCchhhhhhcc
Confidence 445566677887763122 24899999999999999998752 1 2223443444455432222222
Q ss_pred CC-----CCC----CeE-----EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHH
Q 010842 209 GV-----SPA----NIR-----ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAE 270 (499)
Q Consensus 209 G~-----g~~----~v~-----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ 270 (499)
|- +.. ..+ .+.+. .-|+++|++.+++. +..+.+|++.......|.+-| +++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~ 225 (426)
T PRK00062 154 GSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRE 225 (426)
T ss_pred CccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHH
Confidence 21 100 000 01111 13789999888642 233456666655566898877 999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPS 349 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~ 349 (499)
+|++||+++++|.+|.|+ ...........++ ..|.++ ..|.++..+..|+++.++ + +.+.+... ..+...
T Consensus 226 l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~~~~~--- 296 (426)
T PRK00062 226 LCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPVYQAG--- 296 (426)
T ss_pred HHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEHH-H-HHHhhccCCCceecc---
Confidence 999999999999999866 3221111111232 246544 468887655577776654 2 33333211 111111
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEec
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLN 425 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~ 425 (499)
..++.+.......+++..+..+ +..++..++.+++.+.|++ .+ +..-......++.+.+.
T Consensus 297 ------------T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l~ 360 (426)
T PRK00062 297 ------------TLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFFT 360 (426)
T ss_pred ------------cCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEEe
Confidence 0112222223334445444322 3556666667777666653 32 32211233344555443
Q ss_pred CCCCCC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 426 PYPHSG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 426 ~~~~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+..... ..........+.+.+.++|.. +.+.. ...++++ ...|++||++++++|.++.+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 361 DEPVTNYADAKKSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cCCCcchhhhccccHHHHHHHHHHHHHCCeE-eecCC---cCceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 221000 000123346788888888854 33322 1235554 4579999999999999988654
No 329
>PRK06105 aminotransferase; Provisional
Probab=99.40 E-value=1.1e-09 Score=113.36 Aligned_cols=328 Identities=11% Similarity=0.054 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
...+.++.+.|++++..+.+ -.+|+++||+|+-.|+..||...... +..+ ++.+|......|-...-+..+
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 44445556668888743222 24889999999999999998542111 0000 223444455556555444333
Q ss_pred hCC-------C--CCCeEEeeCCCCCCCcc-------------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842 208 AGV-------S--PANIRALPTSVDANFSL-------------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN- 264 (499)
Q Consensus 208 ~G~-------g--~~~v~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~- 264 (499)
.|. | ...+..+|... .++. ..++|++.+... ....+.+|++--.....|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~ 237 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPH--YYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPP 237 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCc--ccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCC
Confidence 221 1 11233443321 0111 245677766421 1234556666555556677766
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
++++.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++.. ...|.++.+++ +...+...
T Consensus 238 ~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~-PDi~~~--gK~lggG~~P~~av~~~~~--i~~~~~~~ 312 (460)
T PRK06105 238 KTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK-PDILVM--SKQLSSSYQPLSAVLMNEK--VYDPIADE 312 (460)
T ss_pred HHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCC-CCeeee--ecccccCcccceEEEEcHH--HHHHHhcc
Confidence 999999999999999999999665433222222223443 787776 4777654 35777777653 22333221
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--C
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--R 415 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~ 415 (499)
..... .+....+.....+.+.+ +|..+-. ++.+++..++.++|.+.|+++....++.+ -
T Consensus 313 ~~~~~-------------~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG 376 (460)
T PRK06105 313 SGKIG-------------TFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRG 376 (460)
T ss_pred cccCc-------------ccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 10000 00001112223344443 4444432 24667778888888888876533222211 1
Q ss_pred CceEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...+..+.+.+.... .. ........++...+.++|.++ .+. + ..+|++.. ...|++|||++++.+.++.+++
T Consensus 377 ~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 377 VGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCPP-LIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred cceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CccCHHHHHHHHHHHHHHHHHH
Confidence 122334444322100 00 011233467888888889544 321 2 46998874 5579999999999999998876
Q ss_pred hc
Q 010842 494 FK 495 (499)
Q Consensus 494 ~~ 495 (499)
.+
T Consensus 451 ~~ 452 (460)
T PRK06105 451 AA 452 (460)
T ss_pred HH
Confidence 54
No 330
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=2.1e-09 Score=110.20 Aligned_cols=314 Identities=13% Similarity=0.094 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
+.++.+.|++++..+.. ...+|+++||+|+..|+..||... | ++.+|-....-|-...-+..+.|.
T Consensus 85 ~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~t~~ 150 (421)
T PRK06777 85 YVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT-------G-RPGVIAFGGAFHGRTLLTMALTGK 150 (421)
T ss_pred HHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEEcCCcCCccHHHHhhcCC
Confidence 34445667777643111 124889999999999999998753 1 122333344456554444433331
Q ss_pred --------C--CCCeEEeeCCCCCC---CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC---hhHHHHHHH
Q 010842 211 --------S--PANIRALPTSVDAN---FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN---VEPLAEVAN 273 (499)
Q Consensus 211 --------g--~~~v~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~---l~~I~~ia~ 273 (499)
+ ...+..+|...... ..-+++.+++.+++.. .+..+.+|++.-.....|.. -| +++|.++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~ 229 (421)
T PRK06777 151 VAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCD 229 (421)
T ss_pred CcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 0 11233344321100 0123666777775321 12334455555555555643 33 899999999
Q ss_pred HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
+||+++++|.+|.++.....-+.....++ ..|.++ .-|.++..+..|+++.++. +.+.+.... .
T Consensus 230 ~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~--i~~~~~~~~--~--------- 293 (421)
T PRK06777 230 EHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE--VMDAPAPGG--L--------- 293 (421)
T ss_pred HcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH--HHhccCCCC--C---------
Confidence 99999999999987533221111111232 367665 5788875566888887643 223322110 0
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~ 429 (499)
..+-....+...+++..+..-.-+++.++..++.+++.+.|+++ |.+.-+ .+...++.+.+....
T Consensus 294 ---------~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~- 362 (421)
T PRK06777 294 ---------GGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ- 362 (421)
T ss_pred ---------CCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc-
Confidence 00111133444444443321111456677777788888777653 433322 344344444443211
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.......+...+...+.++|.++.....+ + .++|+++. ...|+++|++++++|.++.
T Consensus 363 -~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~-g-~~lr~~pp-l~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 363 -TGKPSPEFTRQYQRQALEEGLLLLSCGVH-G-NVIRFLYP-LTIPDAQFSKALNILTRLL 419 (421)
T ss_pred -cCCccHHHHHHHHHHHHhCCeEEeecCCC-C-CEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence 00111345677777788888654332222 2 47999873 5689999999999998875
No 331
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=6.1e-09 Score=106.72 Aligned_cols=317 Identities=13% Similarity=0.056 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
+.+.++.+.+++++.-+.. ...+|+++||||+..|+..||... | ++.+|......|-...-+..+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~ 148 (425)
T PRK07495 83 ENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT-------G-RSAVIAFGGGFHGRTFMGMSLT 148 (425)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCccHHHhhhc
Confidence 3444556668887742210 124899999999999999998752 1 1223334444565443333322
Q ss_pred CC--------C--CCCeEEeeCCCCCCCccC----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHH
Q 010842 209 GV--------S--PANIRALPTSVDANFSLS----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAE 270 (499)
Q Consensus 209 G~--------g--~~~v~~v~~~~~~~~~~d----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~ 270 (499)
|. + ...+..+|.+.+. ..++ .+++++.++.. ..+..+.+|++.-.....|.+- -+++|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~ 226 (425)
T PRK07495 149 GKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRE 226 (425)
T ss_pred CCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHH
Confidence 21 1 1145566654321 1233 33445555321 1123355555554444466442 3899999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
+|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..+..|+++.+++ +.+.+.. ...
T Consensus 227 l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~--i~~~~~~--~~~------ 293 (425)
T PRK07495 227 LCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE--IMDAPGP--GGL------ 293 (425)
T ss_pred HHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH--HHhccCC--CCc------
Confidence 99999999999999987532221111111222 2576666 688876667888887653 2222211 000
Q ss_pred CCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEE
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFR 423 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~ 423 (499)
..+.....+.+. ++++.+..+ +..++..++.++|.+.|++ .|.+.-+... ...+.+.
T Consensus 294 ------------~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie 357 (425)
T PRK07495 294 ------------GGTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP-GFMNAVE 357 (425)
T ss_pred ------------CCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-ceEEEEE
Confidence 011112234444 445444333 3445555666666666654 3332111112 2334444
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.+... ..........+.+.+.++|.++. ..... ...+|+... ...|+++||+++++|.++.+++..
T Consensus 358 l~~~~~--~~~~~~~~~~~~~~~~~~Gvl~~-~~g~~-~~~~r~~Pp-l~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 358 FNDADS--GLPSAEFANRVRLKALEKGLILL-TCGVH-GNVIRFLAP-ITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred EecCCC--CCccHHHHHHHHHHHHHCCeEEe-ecCCC-CCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 433210 00112345678888888996542 22111 256999874 778999999999999999887643
No 332
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.39 E-value=4.4e-09 Score=108.43 Aligned_cols=321 Identities=12% Similarity=0.038 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
+.+.++.+.|++++.-... ....|+++||+||..|+..||... | ++.+|......|-...-++.+.
T Consensus 85 ~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t-------g-r~~ii~~~~~YHG~t~~als~s 150 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT-------G-RPYIISFTNAYHGSTYGSLSMS 150 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCcHHHHhhc
Confidence 4445555668887742210 024889999999999999998653 1 2233444455576655554443
Q ss_pred CCC----------CCCeEEeeCCCCCC--C-ccCH-------HHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 209 GVS----------PANIRALPTSVDAN--F-SLSP-------QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 209 G~g----------~~~v~~v~~~~~~~--~-~~d~-------~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
+.. ...+..+|...... + ..+. +++++.+.... ....+.+|++--.....|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~y 229 (445)
T PRK08593 151 GISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGY 229 (445)
T ss_pred CCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHH
Confidence 320 11344555432100 0 1122 33333332210 1123556666655566677766
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl 344 (499)
+++|.++|++||+++++|+++.|+......+.....++ ..|.+++ -|.++..+..|+++.+++ +.+.+.. ..+.
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~--i~~~~~~-~~~~ 303 (445)
T PRK08593 230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE--IMESLEA-PAHL 303 (445)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH--HHhhhcc-CCCC
Confidence 99999999999999999999866532211111112244 3687765 577765456788887653 2233321 1111
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEE
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVC 421 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~ 421 (499)
. +. .+.+..+....+++..+-.+ +++++..++.++|.+.|+++. ...++.. -....+.
T Consensus 304 ~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~g 364 (445)
T PRK08593 304 F---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIG 364 (445)
T ss_pred C---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEE
Confidence 0 10 11121222333444444322 456666777777777776531 1111211 1112223
Q ss_pred EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.+..... ...........+..++.++|..+ .+. +...+|++.. ...|++||+.+++++.++.+++.+
T Consensus 365 i~l~~~~~-~~~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 365 IDIVSDKK-LKTRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQPP-LVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEEecCCC-cCCCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 33322110 00001234567888888999543 221 2256999984 888999999999999999887654
No 333
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.38 E-value=2.3e-09 Score=110.12 Aligned_cols=303 Identities=15% Similarity=0.078 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.|++++.... ...|+++||||+..|+..||... | ++.+|......|-...-++..
T Consensus 92 ~~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~ 155 (428)
T PRK12389 92 TELEIEFAKMLKEAIPSLE--------KVRFVNSGTEAVMTTIRVARAYT-------G-RTKIIKFAGCYHGHSDLVLVA 155 (428)
T ss_pred CHHHHHHHHHHHHhCCCCc--------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCChHHHHHh
Confidence 3445556666777764211 24899999999999999999763 1 223344455556554444444
Q ss_pred hCCCC----------------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 208 AGVSP----------------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 208 ~G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
.|-+. .++..+|. -|++.|++.+++. +..+.+|++.-.....|.+.| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 33210 01122221 1789999888642 234556666655666788888 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKN 346 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~ 346 (499)
|.++|++||+.+++|.++.|+ ...........|+ ..|.+++ -|.++..+..|.++.+++ +.+.+... +.+..
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~--i~~~~~~~~~~~~~- 298 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD--IMEQVAPLGPAYQA- 298 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH--HHhhhccCCCcccc-
Confidence 999999999999999999876 3221111122344 3787766 688866566888876543 22333211 11110
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCce
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFA 418 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~ 418 (499)
.+-....+.+. ++|..+..+ +..++..++.++|.+.|++ .|- .++.....
T Consensus 299 -----------------~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-- 356 (428)
T PRK12389 299 -----------------GTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-- 356 (428)
T ss_pred -----------------cCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc--
Confidence 11122334433 444444333 3566777778888777765 332 12222111
Q ss_pred EEEEEecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 419 ~v~f~~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
++.+.+....... . ..-......+.+.+.++|..+ .+. +...+.++ ...|++||+++++++.++.++
T Consensus 357 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~~---l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 357 ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFLT---TAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeeec---CCCCHHHHHHHHHHHHHHHHh
Confidence 3333332111000 0 001234567888888889543 332 11123332 457999999999999988764
No 334
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.38 E-value=1.8e-09 Score=111.11 Aligned_cols=326 Identities=15% Similarity=0.138 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|++++.-+.+ ...|+++||+|+..|+..||...... +. +.+..+|......|-...-+....
T Consensus 92 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~-~~r~~ii~~~~~yHG~t~gals~~ 162 (445)
T PRK09221 92 PLAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQ-GTRTRLIGRERGYHGVGFGGISVG 162 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-CCCcEEEEECCCcCccchhhhccC
Confidence 3444455667777642211 24899999999999999998753211 00 011223444444564433333222
Q ss_pred CC-------C--CCCeEEeeCCC---CCCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 209 GV-------S--PANIRALPTSV---DANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 209 G~-------g--~~~v~~v~~~~---~~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
|. + ...+..+|... ...+.. ..++|++.++.. ....+.+|++--.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~y 240 (445)
T PRK09221 163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGY 240 (445)
T ss_pred CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHH
Confidence 21 1 01234444321 000110 135666666431 1134556666666677888888
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
+++|.++|++||+++++|+++.|+.....-+.....++. .|.++++ |.++.. +..|.++.+++ +.+.+...+.+
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~-PDi~~~g--K~l~gG~~Pi~av~~~~~--i~~~~~~~~~~ 315 (445)
T PRK09221 241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT-PDIITFA--KGLTNGAIPMGAVIASDE--IYDAFMQGPEY 315 (445)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCC-CCEEEec--cccccCcccceeeEEcHH--HHHhhccCccc
Confidence 999999999999999999998765322111111123442 6877664 666432 23566666643 22333221111
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVC 421 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~ 421 (499)
.... ....+.. +.+.......++|+.+..+ ..+++..++.++|++.|+++.++..+.+. ...+..
T Consensus 316 ~~~~---------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~ 382 (445)
T PRK09221 316 AIEF---------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAG 382 (445)
T ss_pred cccc---------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEE
Confidence 0000 0000111 2121222223444444333 45678888889999888776332222111 111223
Q ss_pred EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+.+.. ... .....++.+++.++|..+ .. .+ ..+|++.. ...|++||++++++|.++..++
T Consensus 383 v~~~~~~-~~~---~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 383 IELAPRP-GAP---GARGYEAFMKCFEKGLLV-RY---TG-DTIALSPP-LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEEeccc-ccc---cchHHHHHHHHHHCCeEE-ee---cC-CEEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence 3333211 000 112356778888889543 22 12 46999973 7789999999999999988764
No 335
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=2.7e-09 Score=110.11 Aligned_cols=318 Identities=13% Similarity=0.041 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
.+.++.+.|+++++.... ...|+++|||||..|+..||... | ++.+|-....-|-...-+..+.|
T Consensus 97 ~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~~ 161 (457)
T PRK05639 97 RAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST-------R-RPWILAFIGAYHGQTLGATSVAA 161 (457)
T ss_pred HHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHHHcC
Confidence 344455667787653322 24899999999999999998652 1 22233334445655544444433
Q ss_pred C--------C--CCCeEEeeCCCCCC--Cc----cCHHH--------HHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842 210 V--------S--PANIRALPTSVDAN--FS----LSPQL--------LRRAVEADVEAGLVPLFLCATVGTTSTTAVDN- 264 (499)
Q Consensus 210 ~--------g--~~~v~~v~~~~~~~--~~----~d~~~--------L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~- 264 (499)
. + ..++..+|...... +. -|.++ |++.+......+..+.+|++--.....|.+-|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~ 241 (457)
T PRK05639 162 FQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPP 241 (457)
T ss_pred CCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCC
Confidence 2 1 12355666542100 00 12333 33333221111234555655554445566533
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..++.|.++.+++- . +.+. .
T Consensus 242 ~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~-~~~~--~ 314 (457)
T PRK05639 242 ENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-M-DLTS--G 314 (457)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-H-hhcC--C
Confidence 79999999999999999999987532221112222355 3898885 7888766777888876542 1 2111 0
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEcC--CCce
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-PRFEIVVP--RHFA 418 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~--~~~~ 418 (499)
.++. +. .+.+..+....+++..+..+ +.+++..++.++|.+.|+++ .++.++.+ -...
T Consensus 315 ~~~~---------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl 375 (457)
T PRK05639 315 SALL---------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGL 375 (457)
T ss_pred Cccc---------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeecccee
Confidence 1110 10 11111222333344444333 45566667777887777663 12222222 1222
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
++.+.+..+.. .........+.+.+.++|.++ .+.. .+...+|+... ...|++|||+++++|.++.+++.
T Consensus 376 ~~gve~~~~~~---~~~~~~~~~~~~~~~~~Gv~~-~~~g-~~~~~lr~~Pp-l~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 376 MIGVEIVKENG---KPDPELTGKICWRAFELGLIL-PSYG-MFGNVIRITPP-LVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEEEEEecCCC---CCCHHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHH
Confidence 33444432110 001234567888888899543 3321 12357999984 78899999999999999987764
No 336
>PRK05965 hypothetical protein; Provisional
Probab=99.38 E-value=3.8e-09 Score=109.22 Aligned_cols=334 Identities=13% Similarity=0.026 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCe-EEEcCCCCchhHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKL-VVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~-~i~~s~~~H~s~~ka~~ 206 (499)
..+.++.+.|++++.-+.+ ..+|+++||||+-.|+..||...... |. .+. +|......|-...-+..
T Consensus 90 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~----g~~~r~kii~~~~~YHG~t~~a~s 158 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSLN-------HVYFTLGGSDAVDSAVRFIRHYWNAT----GRPSKKQFISLERGYHGSSSVGAG 158 (459)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCChhHHHHHHHHHHHHHHHhc----CCCCccEEEEecCCcCcccHHHHH
Confidence 3444555667777632211 34889999999999999999753211 21 122 34444445655433333
Q ss_pred HhCC-------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----
Q 010842 207 LAGV-------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---- 263 (499)
Q Consensus 207 ~~G~-------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---- 263 (499)
..|. | ...+..+|.... ..+.-| +++|++.++.. ....+.+|++.-.....|.+-
T Consensus 159 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~ 236 (459)
T PRK05965 159 LTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKG 236 (459)
T ss_pred hcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHH
Confidence 3221 1 123344543210 001123 25666666531 113455555554444456552
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
=+++|.++|++||+.+++|.++.|+.....-+.....|+. .|.+++ -|.++..+ ..|.++++++- .+.+.....
T Consensus 237 yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~i--~~~~~~~~~ 311 (459)
T PRK05965 237 WLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVV-PDLMTV--AKGLTSGYVPMGAVLMSDHV--YQGIADGAG 311 (459)
T ss_pred HHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCC-CCeEEe--chhhccCCcceeEEEEcHHH--HHHHhcccc
Confidence 2799999999999999999998876433322222233553 899988 58876664 68888887642 233321110
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV 420 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v 420 (499)
... .+....+.....+...+++..+..-.-++.+++..++.++|.+.|+++....++.+ -...++
T Consensus 312 ~~~-------------~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~ 378 (459)
T PRK05965 312 AAA-------------PVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLG 378 (459)
T ss_pred ccc-------------cccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEE
Confidence 000 00001111223444444444432111124566777888888888876432222211 112233
Q ss_pred EEEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccCC
Q 010842 421 CFRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSA 498 (499)
Q Consensus 421 ~f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~~ 498 (499)
.+.+.... ..+. ........++...+.++|.++ .+ .+..++|++.. ...|++||++++++|.++.+++.++++
T Consensus 379 gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~-~~---~g~~~i~~~Pp-L~it~~ei~~~~~~l~~~l~~~~~~~~ 453 (459)
T PRK05965 379 ALELVADKATKTPFDAALDPADRIFDRAYANGLVF-RA---FGDGVLGFAPA-LCCTEGEFDLIFERTRKTLDDVLADPD 453 (459)
T ss_pred EEEEeccccccCCCCchhHHHHHHHHHHHhCCeEE-Ee---cCCcEEEEECC-CcCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 44443211 0000 001234567888888999654 22 24466999874 678999999999999999998877664
No 337
>PRK06062 hypothetical protein; Provisional
Probab=99.38 E-value=3.8e-09 Score=108.99 Aligned_cols=319 Identities=11% Similarity=0.033 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.+.+.++.+.|++++.-+.+ ...|+++||+|+..|+..||... | ++.+|.....-|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~ 158 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLS-------KVFFTNGGADANEHAVRMARLHT-------G-RPKVLSAYRSYHGGTGSAINL 158 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCChHHHHHHHHHHHHHhh-------C-CceEEEEeCCCCCCCHHHHhh
Confidence 34445556667777642211 34899999999999999998753 1 222333444456554444444
Q ss_pred hCCC--------CCCeEEeeCCCCCCCc------cC-------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 208 AGVS--------PANIRALPTSVDANFS------LS-------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 208 ~G~g--------~~~v~~v~~~~~~~~~------~d-------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
.|.. ...+..++... .++ -| +++|++.++.. ....+.+|++--....-|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~ 234 (451)
T PRK06062 159 TGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPP 234 (451)
T ss_pred cCCcccccCCCCCCCCEEeCCCC--ccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence 3320 01223333221 111 12 56777777431 1234556666555566788888
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++..+ ..|.++.+++ +.+.+...
T Consensus 235 ~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~--i~~~~~~~- 308 (451)
T PRK06062 235 GYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA--IAATFADR- 308 (451)
T ss_pred HHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH--HHHHhccC-
Confidence 99999999999999999999987533222112222355 3788876 68887654 5778887763 33344211
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCeEEEcCCC
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLA-KMFEGFVKS----DPRFEIVVPRH 416 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a-~~l~~~L~~----~~~~~~~~~~~ 416 (499)
.+.... + -.+.+..+....++|..+..+. .+++..++. +++.+.|++ .|.+.-+. -.
T Consensus 309 ~~~~~~-------------T-~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr-G~ 370 (451)
T PRK06062 309 PYPGGL-------------T-YSGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR-GL 370 (451)
T ss_pred CCCCCC-------------C-CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe-cc
Confidence 111100 0 1111222223334444443333 445555554 355555544 33221111 11
Q ss_pred ceEEEEEecCCCC----CCcch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPH----SGSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 417 ~~~v~f~~~~~~~----~~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..++.+.+..+.. ..... .......+.+.+.++|.+. .+ . + ..+|++.. ..+|++|||++++++.++.+
T Consensus 371 Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~-~~--~-~-~~lrl~pp-l~~t~~eid~~~~~l~~~l~ 444 (451)
T PRK06062 371 GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLP-FV--N-G-NRIHVVPP-CTVTEDEVREGLAILDAALA 444 (451)
T ss_pred ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEE-ee--c-C-CEEEEECC-ccCCHHHHHHHHHHHHHHHH
Confidence 2233444322110 00000 0224567888899999653 22 1 2 36898873 67899999999999999987
Q ss_pred HHhc
Q 010842 492 RLFK 495 (499)
Q Consensus 492 ~l~~ 495 (499)
++..
T Consensus 445 ~~~~ 448 (451)
T PRK06062 445 VADA 448 (451)
T ss_pred Hhhh
Confidence 7643
No 338
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.37 E-value=2.2e-09 Score=110.80 Aligned_cols=309 Identities=12% Similarity=0.028 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.+++.+..-+ ...|+++||||+..|+..||... | ++.+|-.....|-........
T Consensus 138 ~~~~~~lAe~l~~~~p~~~--------~v~f~~SGsEA~e~AlklAR~~t-------g-r~~Ii~~~g~YHG~~~~~~~~ 201 (474)
T PLN02482 138 CLLENVLAEMVIDAVPSVE--------MVRFVNSGTEACMGVLRLARAYT-------G-REKIIKFEGCYHGHADSFLVK 201 (474)
T ss_pred CHHHHHHHHHHHHhCCCCC--------EEEEeCChHHHHHHHHHHHHHhc-------C-CCEEEEECCccCCCcchhhhh
Confidence 4566677788888874212 24899999999999999998753 1 122233333345432211111
Q ss_pred h--CC---------CC-----CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 208 A--GV---------SP-----ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 208 ~--G~---------g~-----~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
. |. |. ..+..+|. -|+++|++.+++ .+..+.+|++.-.....|.+.| +++
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~---~~~~iAavI~Epv~g~~G~i~p~~~fl~~ 271 (474)
T PLN02482 202 AGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEA---NKGEIAAVILEPVVGNSGFIVPKKEFLEG 271 (474)
T ss_pred cCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHh---CCCceEEEEECCCCCCCCCcCCCHHHHHH
Confidence 1 11 00 01112221 178999998864 2234556666665566787766 568
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
|.++|++||+.+++|.++.|+ ...........|+ ..|.+++ -|.++..+.+|.+..+++ +.+.+.....+....
T Consensus 272 lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e--i~~~~~~~~~~~~~~ 345 (474)
T PLN02482 272 LREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE--IMEMVAPAGPMYQAG 345 (474)
T ss_pred HHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH--HHHhhccCCCccccc
Confidence 999999999999999998765 3322222222344 3788776 688876677888876643 223332111111100
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEE-cCCCceEEEEE
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIV-VPRHFALVCFR 423 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~-~~~~~~~v~f~ 423 (499)
|. .+.+.......++|..+.. ++..++..++.++|.+.|+++- ++.++ .... .++.+.
T Consensus 346 -------------T~-~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~-g~~gi~ 407 (474)
T PLN02482 346 -------------TL-SGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS-GMFGFF 407 (474)
T ss_pred -------------Cc-chhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc-eEEEEE
Confidence 00 0111122233344444432 2456677777778777776531 12222 2222 233333
Q ss_pred ecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+....... + ..-.....++...+.++|.. +.+..... + .+ +...|++|||++++++.++.+++
T Consensus 408 f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~-~~~~~~~~----~-~p-sl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 408 FTEGPVYNFADAKKSDTAKFARFHRGMLEEGVY-LAPSQFEA----G-FT-SLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred EecCCccChhhhccCCHHHHHHHHHHHHHCCeE-EeccCCCC----C-cC-CCCCCHHHHHHHHHHHHHHHHhC
Confidence 32210000 0 00123345678888888854 33321111 1 12 46679999999999999987653
No 339
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.35 E-value=2.6e-09 Score=110.09 Aligned_cols=325 Identities=12% Similarity=0.037 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
++.+.++.+.|++++.... .. .-.+++++||||+..|+..||... | ++.+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT-------G-RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEEcCCcCCchHHHHh
Confidence 3455555666888874321 00 012446899999999999999762 1 22344445556666555554
Q ss_pred HhCC---------CCCCeEEeeCCCCCCCcc--------CHHHHHHHHHHHHH----cCCccEEEEEecCCCccccc---
Q 010842 207 LAGV---------SPANIRALPTSVDANFSL--------SPQLLRRAVEADVE----AGLVPLFLCATVGTTSTTAV--- 262 (499)
Q Consensus 207 ~~G~---------g~~~v~~v~~~~~~~~~~--------d~~~L~~~i~~~~~----~g~~p~~vv~t~gtt~~G~i--- 262 (499)
..|. ....+..+|... .++. +.+.+.+.+++... ....+.+|++.-...+.|.+
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4431 011344454431 1222 22333332322221 11234455555444455655
Q ss_pred -CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842 263 -DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 263 -d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+=+++|.++|++||+++++|.++.|+.....-+.....++. .|.+++ -|.++..+..|.++.+++ + ..+. .
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIE-PDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCC-CcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence 23899999999999999999999876443222221223443 788885 688876677888888764 2 2221 1
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCce
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFA 418 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~ 418 (499)
.... +...+.+.......++|+.+..+ +..++..++.++|.+.|+++. ...++.+ -...
T Consensus 298 ~~~~---------------~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 298 AGHT---------------GTFRGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred CcCC---------------CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 0000 00112222222333344443333 345566677777777776531 1222222 1223
Q ss_pred EEEEEecCCC-CCC---cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYP-HSG---SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~-~~~---~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.+.+.... ..+ ... .......+...+.++|.++ .+.... ..++|+... ...|++||+++++++.++..++
T Consensus 360 ~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~~~~-~~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 360 MQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLL-ETGGRE-GEVFRLLCP-ITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEE-eecCCC-CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 3444443211 000 000 1134567788888889543 332222 356899884 7789999999999999998887
Q ss_pred hcc
Q 010842 494 FKG 496 (499)
Q Consensus 494 ~~~ 496 (499)
.++
T Consensus 437 ~~~ 439 (442)
T TIGR00709 437 LAE 439 (442)
T ss_pred HHH
Confidence 654
No 340
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.35 E-value=8.4e-10 Score=110.34 Aligned_cols=280 Identities=12% Similarity=0.079 Sum_probs=156.8
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC----
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG---- 209 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G---- 209 (499)
+.+.+++++|.+. .+++++||+|+..|+..||... | ++.+|..+...|-...-+....|
T Consensus 71 la~~l~~~~~~~~---------v~~~~SGseA~e~Alklar~~~-------g-r~~Ii~~~~syHG~t~~~ls~~~~~~~ 133 (364)
T PRK04013 71 MLEELSKWVNYEY---------VYMGNSGTEAVEAALKFARLYT-------G-RKEIIAMTNAFHGRTMGALSATWKPKY 133 (364)
T ss_pred HHHHHHhhcCCCE---------EEEeCchHHHHHHHHHHHHHHh-------C-CCEEEEECCccccCchhhccCCCCccc
Confidence 3344677776643 3899999999999999998752 1 12234444444654433333222
Q ss_pred ---CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC---hhHHHHHHHHhCCEEE
Q 010842 210 ---VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN---VEPLAEVANEYGIWVH 280 (499)
Q Consensus 210 ---~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~---l~~I~~ia~~~~~~lh 280 (499)
.+. ..+..+|. -|++++++.+.++ +.+|++.......|.+ -| +++|.++|++||+.++
T Consensus 134 ~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI 200 (364)
T PRK04013 134 REDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLI 200 (364)
T ss_pred ccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 110 12222322 2678888887532 3355555544444554 34 9999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 360 (499)
+|+++.|+ ....-+.....++. .|.+++ -|.++..+..|.++.++.- .+.. ..
T Consensus 201 ~DEv~tG~-RtG~~~a~~~~gv~-PDiv~~--gK~lggG~P~~a~~~~~~~--------~~~~--~~------------- 253 (364)
T PRK04013 201 ADEVQSGL-RTGKFLAIEHYKVE-PDIVTM--GKGIGNGVPVSLTLTNFDV--------ERGK--HG------------- 253 (364)
T ss_pred EechhhcC-CCCchhHHHhcCCC-CCEEEe--cccccCCceeEEEEecccc--------cCCC--cC-------------
Confidence 99998875 33222222223443 788887 5877655667777766431 0000 00
Q ss_pred ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR 440 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 440 (499)
+.-.+.+..+....+++..+-.+++.+.+++. +. .+.. |.+.-+ .-..-++.+.+..+ ..
T Consensus 254 ~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~v~~v-RG~Gl~~gve~~~~-----------~~ 313 (364)
T PRK04013 254 STFGGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ERVVTT-RGRGLMIGIVLKKP-----------VG 313 (364)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Ccceee-eeCcEEEEEEeCCc-----------HH
Confidence 00112222233344445555444444333321 22 2222 221111 11122334444321 24
Q ss_pred HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+.+.+.++|.+. .+ .+..++|+... ...|++|+++++++|.++.++++.
T Consensus 314 ~i~~~~~~~Gll~-~~---~g~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~~~~ 363 (364)
T PRK04013 314 KYVEELQNRGYLV-HT---AGQRVIRLLPP-LIISKDTMEEAKSAIEGVINDILG 363 (364)
T ss_pred HHHHHHHhCCcEE-ee---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHHHHHhc
Confidence 5777888889544 22 23467999884 678999999999999999887653
No 341
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.35 E-value=2.4e-09 Score=102.29 Aligned_cols=340 Identities=17% Similarity=0.125 Sum_probs=197.8
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
..+.|+.|.+..-+.+.+.+.+.+.=|.|.+. .+.++|+|+|.|+.+-|...... ++.-|+++-+
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p-----~dI~LT~GAS~ai~~il~l~~~~----------~~~GvliPiP 169 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADP-----EDIFLTTGASPAIRSILSLLIAG----------KKTGVLIPIP 169 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCH-----HHeeecCCCcHHHHHHHHHHhcC----------CCCceEeecC
Confidence 55789999999999999999999998875442 36799999998877666554432 2333555655
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVAN 273 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~ 273 (499)
-++-+...+..+|. ..+..-.|++.+|.+|.++|++.+++.. ++..|.++|+..+-|+||.+ +.+++|..+|+
T Consensus 170 QYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~ 245 (475)
T KOG0258|consen 170 QYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAA 245 (475)
T ss_pred CCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence 66666666778888 6776667887889999999999999987 78999999999999999999 77999999999
Q ss_pred HhCCEEEeeccccchhccCc-c---chhhhc--C--CC-CCceeEec-ccccccC--CCcceEEEE--eCchhHHHhhcC
Q 010842 274 EYGIWVHVDAAYAGSACICP-E---FRHYLN--G--IE-RVDSFSFS-PHKWLLS--YLDCCCLWV--KQPGLLVKALST 339 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~-~---~~~~~~--g--~~-~aDsi~~~-~hK~l~~--p~~~g~l~~--r~~~~l~~~~~~ 339 (499)
++++.+..|.+|--..+.-. + ++..+. | .. .+..+++. .||...+ ....|.+=+ ++++.....+..
T Consensus 246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl 325 (475)
T KOG0258|consen 246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL 325 (475)
T ss_pred HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence 99999999998754433211 1 111110 1 11 23333332 3444322 222333222 222211111111
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
...-+...-.. ....+....--.+.. ...+|. ..-..+++.....|+.+.+.+++.+|++.. +++..
T Consensus 326 ~si~lc~~V~G----Q~~vdl~VnPP~Pgd~Sy~~~~-------~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGA 393 (475)
T KOG0258|consen 326 ASIKLCPQVSG----QKLVDLVVNPPKPGDPSYDLFS-------SEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGA 393 (475)
T ss_pred HhhhhcCCccc----hhhhceecCCCCCCCcchhhhh-------hhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccc
Confidence 00000000000 000000000000000 112221 122345666778888999999999998865 77777
Q ss_pred EEEEEecCCCCCCcchhHHH---HHH-HH-HHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEML---NRK-LL-DWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~---~~~-l~-~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+..|--.......-+..... .+. .+ +.|.+.|+..+.++.++ |...+|.++. +.. + ..++.++++=
T Consensus 394 MY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL-p~~----~-~~i~~~~~fH 467 (475)
T KOG0258|consen 394 MYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL-PPG----L-EIIEKFKKFH 467 (475)
T ss_pred eeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeec-Cch----h-HHHHHHHHHH
Confidence 77773221110000000000 001 12 33456787777666654 5688999986 433 3 5555555554
Q ss_pred HHH
Q 010842 491 DRL 493 (499)
Q Consensus 491 ~~l 493 (499)
+++
T Consensus 468 ~~f 470 (475)
T KOG0258|consen 468 AEF 470 (475)
T ss_pred HHH
Confidence 444
No 342
>PRK06149 hypothetical protein; Provisional
Probab=99.34 E-value=5.7e-09 Score=117.36 Aligned_cols=319 Identities=11% Similarity=0.010 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
...++.+.|++++.-+.+ ..+|++|||+||..|+..||... | ++.+|......|-...-+..+.+
T Consensus 625 ~~~elae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~ga~~~s~ 689 (972)
T PRK06149 625 AVAEFSERLAALAPDGLD-------TVFLVNSGSEANDLAIRLAWAAS-------G-RRDVVSVLEAYHGWTVATDAVST 689 (972)
T ss_pred HHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHhc-------C-CCeEEEEeCCCCCcChhHhhhcC
Confidence 344445557777732111 24899999999999999998753 1 23344445555643322222211
Q ss_pred ----------CCCCCeEEeeCCCC--CCCc-cC-----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 210 ----------VSPANIRALPTSVD--ANFS-LS-----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 210 ----------~g~~~v~~v~~~~~--~~~~-~d-----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
...+.+..++.... ..|. .+ .+++++.++.....+..+.+|++--.....|.+-| +++
T Consensus 690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~ 769 (972)
T PRK06149 690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ 769 (972)
T ss_pred CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence 10112344443210 1121 12 35666666554444455666666655556688878 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccc-hhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEF-RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN 346 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~ 346 (499)
|.++|++||+.+++|.++.|+......+ .....|+ ..|.+++ -|.++..+..|+++++++ +.+.+... .++..
T Consensus 770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~--i~~~~~~~-~~~~s 843 (972)
T PRK06149 770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE--IAEALEAE-GYFFS 843 (972)
T ss_pred HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH--HHhhhccC-CcccC
Confidence 9999999999999999996653322211 1112355 3798877 688876567888888764 22333221 12111
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEE
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCF 422 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f 422 (499)
+ . .+.+..+....++|..+-.+ ++.++..++.++|.+.|+++ |-+.-+. -...++.+
T Consensus 844 T--------------~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Gl~~gv 904 (972)
T PRK06149 844 S--------------T-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVH-GMGLYLGV 904 (972)
T ss_pred C--------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-ecceEEEE
Confidence 0 0 12222223333344444333 35566666667777777653 3221111 11223344
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+.... .+..........+.+++.++|.++ .+... ...++|+... ...|++||+.++++|.++..+
T Consensus 905 el~~~~-~~~~~~~~~~~~i~~~l~~~Gvl~-~~~g~-~~~vl~~~Pp-l~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 905 ELVRDR-QTLEPATEETAAICDRLLELGVIM-QPTGD-HLNILKIKPP-LCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEecCc-ccCCCChHHHHHHHHHHHhCCeEE-eecCC-CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence 443211 000011234567888899999644 33211 1256898773 568999999999999998764
No 343
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.34 E-value=1.6e-08 Score=103.69 Aligned_cols=314 Identities=14% Similarity=0.097 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
...+.++.+.|++++..+.. ...+|+++||+|+..|+..||... | ++.+|.....-|-...-+...
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~ 147 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT-------G-RPGVIAFSGGFHGRTYMTMAL 147 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHhh
Confidence 33444555667777643211 124889999999999999998642 1 122333344456544333333
Q ss_pred hCC--------C--CCCeEEeeCCCCCCCcc----CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC-C---hhHHH
Q 010842 208 AGV--------S--PANIRALPTSVDANFSL----SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-N---VEPLA 269 (499)
Q Consensus 208 ~G~--------g--~~~v~~v~~~~~~~~~~----d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-~---l~~I~ 269 (499)
.|. + ...+..+|...+.. .+ +++.+++.+++.. ....+.+|++.-..++.|.+- | +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~ 225 (421)
T PRK09792 148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR 225 (421)
T ss_pred cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 221 1 11345555532211 12 3466776665311 123455677766677778653 5 89999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 349 (499)
++|++||+++++|.++.++......+.....++ ..|.+++ -|.++..+..|+++.+++ +.+.+... ..
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t~--gK~l~~G~pigav~~~~~--i~~~~~~~--~~----- 293 (421)
T PRK09792 226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMTM--AKSLAGGMPLSGVVGNAN--IMDAPAPG--GL----- 293 (421)
T ss_pred HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEEe--ehhhcCCCceEEEEEcHH--HHhccCCC--Cc-----
Confidence 999999999999999987643221111111122 3676555 698876677888877543 22222110 00
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEE
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCF 422 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f 422 (499)
..+.....+... ++++.+..+ +.+++..++.+++.+.|++ .|.+.-+ .-...++.+
T Consensus 294 -------------~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~v-rG~Gl~~~i 356 (421)
T PRK09792 294 -------------GGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAV-RGLGSMIAA 356 (421)
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCccee-cccceEEEE
Confidence 011122334444 444444332 4555566666666666654 3432111 111334555
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.+.+.... .......+.+...+.++|..+. +.. ....++|+.+. ...+++||++++++|.++..
T Consensus 357 e~~~~~~~--~~~~~~~~~l~~~~~~~Gv~i~-~~g-~~~~~irl~P~-l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 357 EFNDPQTG--EPSAAIAQKIQQRALAQGLLLL-TCG-AYGNVIRFLYP-LTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EecCCccC--CcchHHHHHHHHHHHHCCcEEe-ecC-CCCCEEEEeCC-CcCCHHHHHHHHHHHHHHHh
Confidence 55432100 0011346778888999996542 211 11367999873 55899999999999988753
No 344
>PRK07482 hypothetical protein; Provisional
Probab=99.33 E-value=7.5e-09 Score=107.10 Aligned_cols=330 Identities=12% Similarity=0.007 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~ 205 (499)
++.+.++.+.|++++.-+.+ -..|+++||||+-.|+..||...... |. .+..|+. ....|-...-+.
T Consensus 93 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~----g~~~r~~Ii~~~~~YHG~t~ga~ 161 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGMS-------KVYYGLSGSDANETQIKLVWYYNNVL----GRPEKKKIISRWRGYHGSGVVTG 161 (461)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCceEEEecCccCCccHhhh
Confidence 45555666778887732111 24899999999999999998653111 11 1233443 444454332222
Q ss_pred HHhC---------CCCCCeEEeeCCCCCCC-----------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC--
Q 010842 206 KLAG---------VSPANIRALPTSVDANF-----------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-- 263 (499)
Q Consensus 206 ~~~G---------~g~~~v~~v~~~~~~~~-----------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-- 263 (499)
.+.| .....+..+|.....+. .-++++|++.+... ....+.+|++.-.....|.+-
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~ 239 (461)
T PRK07482 162 SLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPP 239 (461)
T ss_pred hccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCC
Confidence 2221 11123444443210000 01456777777431 123355555554444456662
Q ss_pred --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842 264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~ 340 (499)
=+++|.++|++||+.+++|.++.|+.....-+.....|+. .|.+++ -|.++..+ ..|.++++++ +.+.+...
T Consensus 240 ~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~ 314 (461)
T PRK07482 240 AGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE-PDLITV--AKGLTSAYAPLSGSIVGEK--VWDVLEQG 314 (461)
T ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC-CCEEEE--ccccccCccccceeeecHH--HHHHHhcc
Confidence 2789999999999999999998877443332222334553 899997 58886654 5777777654 22333211
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVV 413 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~ 413 (499)
... .. .+....+-....+...+ +|+.+-.+ +..++..++.++|.+.|++ .|.+.-+
T Consensus 315 ~~~--~~-----------~~~h~~T~~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v- 377 (461)
T PRK07482 315 SDE--HG-----------AIGHGWTYSGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV- 377 (461)
T ss_pred ccc--CC-----------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-
Confidence 100 00 00011111223444444 44444333 3455566666777766653 3322111
Q ss_pred CCCceEEEEEecCCCC-CCcch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPH-SGSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~-~~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.-...++.+.+..... ..... ......++...+.++|.++ .... +...+|+... ..+|++||+++++++.+..+
T Consensus 378 rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~~--~~~~i~~~Pp-l~it~~ei~~~~~~l~~~l~ 453 (461)
T PRK07482 378 RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIA-RAMP--HGDILGFAPP-LVLTRAEADEIVAIAKDAVD 453 (461)
T ss_pred eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEE-ecCC--CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHH
Confidence 1122233344432110 00000 1124567888899999543 2211 1256898873 67899999999999999888
Q ss_pred HHhcc
Q 010842 492 RLFKG 496 (499)
Q Consensus 492 ~l~~~ 496 (499)
++.++
T Consensus 454 ~~~~~ 458 (461)
T PRK07482 454 EVLGR 458 (461)
T ss_pred HHHHH
Confidence 76544
No 345
>PRK07480 putative aminotransferase; Validated
Probab=99.33 E-value=7.9e-09 Score=106.71 Aligned_cols=329 Identities=11% Similarity=-0.005 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~ 205 (499)
...+.++.+.|+++++.+.+ ..+|+++||+|+..|+..||...... |. .+..|+ .....|-...-+.
T Consensus 93 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~----g~~~r~~ii~~~~~yHG~tl~a~ 161 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFN-------HVFFTNSGSEANDTVLRMVRHYWALK----GKPQKKVIISRKNGYHGSTVAGA 161 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCcchhhh
Confidence 34444555667777742211 34899999999999999998753211 11 133333 3444465443333
Q ss_pred HHhCC-------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 206 KLAGV-------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 206 ~~~G~-------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
...|. | ...+..+|.... ..+..+ .+.|++.+.+. .+..+.+|++--.....|.+.|
T Consensus 162 s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~ 239 (456)
T PRK07480 162 SLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPA 239 (456)
T ss_pred hccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCH
Confidence 32221 1 112333432210 000011 25555544321 1234555555544445677755
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++..+ ..|.++.+++ +.+.+....
T Consensus 240 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~ 314 (456)
T PRK07480 240 TYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR--VAEVLIEEG 314 (456)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH--HHHHHhcCC
Confidence 89999999999999999999877633222112222344 3788777 58776543 5777777654 223331111
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEEcC--CCce
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSD-IRLAKMFEGFVKSDPRFEIVVP--RHFA 418 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~~~~~--~~~~ 418 (499)
..+... +...+.+..+....++|..+-.++ .+++. .++.++|.+.|+++....++.. -...
T Consensus 315 ~~~~~~-------------~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Gl 378 (456)
T PRK07480 315 GEFNHG-------------FTYSGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGL 378 (456)
T ss_pred CCcccC-------------CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecc
Confidence 111000 001122222233344444443333 44455 3556666666654322211111 1122
Q ss_pred EEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 419 LVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 419 ~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
++.+.+...... .. .........+..++.++|.++. +. + ..+|++.. ...|++|||+++++|.++..++.++
T Consensus 379 m~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~-~~---~-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~ 452 (456)
T PRK07480 379 VGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMR-AV---G-DRMIISPP-LVITHAEIDELVEKARKALDATAAE 452 (456)
T ss_pred eEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEe-ec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333444221100 00 0112234567778888996542 21 2 35888874 5679999999999999998887554
No 346
>PRK07036 hypothetical protein; Provisional
Probab=99.33 E-value=7.4e-09 Score=107.24 Aligned_cols=328 Identities=11% Similarity=0.052 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
++.+.++.+.|++++.-+.+ ...|++|||+|+..|+..||...... +..+ +..+|.....-|-...-+..+
T Consensus 94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~ 164 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDLN-------HVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL 164 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence 44555566667777632211 35899999999999999998653211 0000 122333344456544333333
Q ss_pred hCCC---------CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 208 AGVS---------PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 208 ~G~g---------~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
.|-. ...+..+|.... ..+.+. .+.+++.+.. ..+..+.+|++--.....|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y 242 (466)
T PRK07036 165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY 242 (466)
T ss_pred cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence 3221 012444443210 001111 2344444432 12345666776666666687766
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC--
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD-- 340 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~-- 340 (499)
+++|.++|++||+.+++|.++.|+.....-+... ..|+. .|.+++ -|.++..+ .+|.++++++ +.+.+...
T Consensus 243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~-PDivt~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~ 317 (466)
T PRK07036 243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQ-PDIITF--AKGLTSGYQPLGAVIISER--LLDVISGPNA 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCC-CCEEEE--ccccccCccccEEEEEcHH--HHHHHhcccC
Confidence 9999999999999999999987753322111111 23443 788877 58876553 5788887754 22333211
Q ss_pred cc--CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CC
Q 010842 341 PE--YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RH 416 (499)
Q Consensus 341 ~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~ 416 (499)
+. |... .+-....+.+.+++..+..-.-+++.++..++.++|.+.|+++....++.. -.
T Consensus 318 ~~~~~~~~-----------------~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~ 380 (466)
T PRK07036 318 KGNVFTHG-----------------FTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGD 380 (466)
T ss_pred cCcccccC-----------------CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 00 1111 111223444444444432111124666777777888777765422222211 11
Q ss_pred ceEEEEEecCCCCCC-cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 417 FALVCFRLNPYPHSG-SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~-~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
..++.+.+..+.... ... .......+.+.+.++|.+. .+. + ..+|++.. ..+|++|||++++++.++.+++.
T Consensus 381 Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~---~-~~~~l~Pp-l~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 381 HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLV-RPL---E-HLCVLSPP-LIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEE-eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHH
Confidence 233444443211000 000 1234567888888999644 221 2 35788763 55799999999999988776653
No 347
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.33 E-value=5.2e-09 Score=107.16 Aligned_cols=317 Identities=12% Similarity=0.070 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH---HHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF---AKV 204 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~---~ka 204 (499)
+..+.++.+.|+++++...+ ...|+++||||+..|+..||... | ++.+|-....-|-.. ..+
T Consensus 92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t-------g-r~~ii~~~~~yHG~td~~~~~ 156 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT-------G-RSIIIKFLGCYHGHADTLLQG 156 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh-------C-CCEEEEEcCccCCCCcccCcc
Confidence 34455566778888754322 24899999999999999999753 1 122333333345432 111
Q ss_pred HHHhCCCCCCe-EEeeCCCCCCC-----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh----hHHHHHHHH
Q 010842 205 CKLAGVSPANI-RALPTSVDANF-----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV----EPLAEVANE 274 (499)
Q Consensus 205 ~~~~G~g~~~v-~~v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l----~~I~~ia~~ 274 (499)
....+-..... ...+......+ .-|+++|++.+.+. +..+.+|++.-.....|.+-|. ++|.++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~ 233 (433)
T PRK00615 157 ISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR 233 (433)
T ss_pred cccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 11111100000 00000000000 12789999988642 2335566666666667887664 599999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
||+.+++|.++.|+ ...........++ ..|.+++ -|.++..+.+|+++.+++ +.+.+... .+....
T Consensus 234 ~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~--i~~~~~~~-~~~~~~------- 299 (433)
T PRK00615 234 TGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKS--IMDHLAPE-GTIFQA------- 299 (433)
T ss_pred cCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHH--HHhhhcCC-CCcccC-------
Confidence 99999999999665 2222111122344 3788775 788875556788877654 22333211 111000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCe--EEEcCCCceEEEEEecCCCC
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRF--EIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~--~~~~~~~~~~v~f~~~~~~~ 429 (499)
+.-.+.+..+....++|..+..+ ...++..++.++|.+.|++. .++ .... ...++.+.+.....
T Consensus 300 ------~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r--~G~~~~i~~~~~~~ 368 (433)
T PRK00615 300 ------GTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR--YGSMFSFFFNENRP 368 (433)
T ss_pred ------CCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe--eceEEEEEEeCCCC
Confidence 00011122223334444444332 34566666666665555431 123 2222 22334444432110
Q ss_pred CC--cc--hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 430 SG--SA--DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 430 ~~--~~--~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.. +. .......++...+.++|.. +.+..+.. . .+ +...|++|||++++++.++++.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 369 NNLAEAQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred CChHHHhhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 00 00 0133456788889999953 33322111 1 22 355699999999999999988764
No 348
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.8e-10 Score=104.89 Aligned_cols=320 Identities=12% Similarity=0.123 Sum_probs=179.6
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQ 196 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~ 196 (499)
...|....+-+.+-+.+..++.+-+|+.-+. -+..+|+|+..+.+......-.+. .+|..+ .|+.+ .+
T Consensus 67 ~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~G~~-----sdG~~k-~illPLaP 135 (417)
T COG3977 67 LCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFAGRR-----SDGTEK-KILLPLAP 135 (417)
T ss_pred HhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhcCcc-----CCCcce-eEeeccCh
Confidence 4457777788889999999999999996432 256788887777766654332111 112222 23333 11
Q ss_pred CchhHHHHHHHhCCCCCCeEEe------eCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CCh
Q 010842 197 THSTFAKVCKLAGVSPANIRAL------PTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNV 265 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v------~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l 265 (499)
.+.. +.++|.+.=.+| ...+.+ .|++|.++|+-. +.+ -+|+++-++|+||.+ +.+
T Consensus 136 eYiG------Y~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--e~~------g~ic~SRPtNPTGNVlTdeE~ 201 (417)
T COG3977 136 EYIG------YADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--EST------GAICVSRPTNPTGNVLTDEEL 201 (417)
T ss_pred hhcc------ccccccCccceeeccCCcccccccceeeccCHHHcccc--ccc------ceEEecCCCCCCCCcccHHHH
Confidence 2211 222222211222 122223 278888888533 333 389999999999999 668
Q ss_pred hHHHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
.+|.++|++||+++++|.|||-.+-- ....... +..--..++|..|.+....-||+++-.++ +.++++....-
T Consensus 202 ~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~---w~~NiilC~SLSK~GLPG~R~GIiIane~--viqaitnmn~i 276 (417)
T COG3977 202 AKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL---WNENIILCMSLSKLGLPGSRCGIIIANEK--VIQAITNMNGI 276 (417)
T ss_pred HHHHHHhhhcCCcEEEecccCCCCCceeccccccc---CCCCEEEEeehhhcCCCCcceeEEEccHH--HHHHHHhccce
Confidence 88999999999999999999764311 1111111 11233578899998876667888775543 22444332111
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH----HHHhcHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEEcCCCce
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV----LRSYGVLNLQSHIRSDIR-LAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~----l~~~g~~g~~~~~~~~~~-~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
+ ++.-+|-..|+..-+. |..+...-++-..++..+ .-..++..|-+. .+.+ ..|+..
T Consensus 277 i----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~i-HkpEGA 338 (417)
T COG3977 277 I----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLI-HKPEGA 338 (417)
T ss_pred e----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceee-ecCCcc
Confidence 1 1112222223222111 111211212211111111 122333333332 2333 356656
Q ss_pred EEEE-EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---------CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 419 LVCF-RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---------GGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 419 ~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
++.+ ++.+.. -.+..+.++|.+.|.+++.+..+ +...|+|++.. -+++.|+.-+..|.+
T Consensus 339 IFlWLWf~dLP--------Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~---~~~~~ie~Gva~lae 407 (417)
T COG3977 339 IFLWLWFKDLP--------ITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV---PEPEKIEKGVAILAE 407 (417)
T ss_pred eeehhhhccCC--------CCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC---CCHHHHHHHHHHHHH
Confidence 5543 443321 12678899999999887765543 23478998875 577889999999988
Q ss_pred HHHHHhcc
Q 010842 489 GADRLFKG 496 (499)
Q Consensus 489 ~~~~l~~~ 496 (499)
..+++..+
T Consensus 408 ~ve~~yq~ 415 (417)
T COG3977 408 EVERAYQE 415 (417)
T ss_pred HHHHHHhc
Confidence 88877654
No 349
>PRK07481 hypothetical protein; Provisional
Probab=99.31 E-value=1.5e-08 Score=104.57 Aligned_cols=334 Identities=13% Similarity=0.060 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.|+++++-+.- ....|+++||||+..|+..||...... +..| +..+|......|-...-+...
T Consensus 85 ~~~~~~lae~L~~~~~~~~~------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~ga~s~ 156 (449)
T PRK07481 85 HPRAIELSYELIDMFAPEGM------RRVFFSSGGSDSVETALKLARQYWKVR-GQPE-RTKFISLKQGYHGTHFGGASV 156 (449)
T ss_pred CHHHHHHHHHHHHhcCCCCC------CEEEEcCchHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcchhhhcc
Confidence 34445566668888742111 134899999999999999998753211 1001 122344444456544333332
Q ss_pred hCC-------C--CCCeEEeeCCCCC--CCc-cCHHHHHHHHHHH----H--HcCCccEEEEEecCCCcccccCC----h
Q 010842 208 AGV-------S--PANIRALPTSVDA--NFS-LSPQLLRRAVEAD----V--EAGLVPLFLCATVGTTSTTAVDN----V 265 (499)
Q Consensus 208 ~G~-------g--~~~v~~v~~~~~~--~~~-~d~~~L~~~i~~~----~--~~g~~p~~vv~t~gtt~~G~id~----l 265 (499)
.|- + ...+..++....- .|. -|++.+++.+.+. . ..+..+.+|++--.....|.+-| +
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl 236 (449)
T PRK07481 157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW 236 (449)
T ss_pred CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence 221 0 1123444332100 011 2555554433221 1 12234566666655555676644 8
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYL 344 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl 344 (499)
+++.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++..+ ..|.++++++ +.+.+......
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~~~- 310 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK-PDIMCL--AKGITSGYVPLGATMVNAR--IADAFEANADF- 310 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCC-CCEEEE--eecccCCCcCceEEEEcHH--HHHHHhccCcc-
Confidence 99999999999999999998776332221112223443 788888 58776553 5788888764 22333221100
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEE
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVC 421 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~ 421 (499)
.. .+ ....+.....+.+.+++..+..-.-++..++..++.++|.+.|+++. ...++.. -...++.
T Consensus 311 -~~--------~~---~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~g 378 (449)
T PRK07481 311 -GG--------AI---MHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLA 378 (449)
T ss_pred -cc--------cc---ccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEE
Confidence 00 00 00111122344444444433211112455666677777777776542 1222211 1122334
Q ss_pred EEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 422 FRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 422 f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+.... .... .........+.+++.++|.++ .+. + ..+|++.. ...|++|||++++++.++.+++
T Consensus 379 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 379 LDLVADKATREPIDPSKGYANAVADVARENGVLV-RPS---G-TKIILSPP-LVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEecccccccCCCCchhHHHHHHHHHHHhCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 4443211 0000 001234567888888899543 221 2 24788763 5579999999999999988765
No 350
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.30 E-value=1.7e-08 Score=104.46 Aligned_cols=320 Identities=14% Similarity=0.064 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
...+.++.+.|++++.-+.. ....|+++||||+..|+..||... | ++.+|-.....|-...-+..+
T Consensus 96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~ 161 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-------K-RQGIISFSRGFHGRTLMTMTM 161 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-------C-CCcEEEECCCcCccchhhhhh
Confidence 34455566678888743210 024899999999999999998753 1 222333344456554444333
Q ss_pred hCC--------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCccccc----C
Q 010842 208 AGV--------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----D 263 (499)
Q Consensus 208 ~G~--------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d 263 (499)
.|- + ...+..+|.... ....+. .+.+++.+.... .+..+.+|++.-.....|.+ +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~ 240 (451)
T PRK06918 162 TSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKK 240 (451)
T ss_pred cCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHH
Confidence 221 1 112444443210 000111 123333332111 12234445444433334554 2
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
-+++|.++|++||+|+++|.+|.++......+.....++ ..|.++ .-|.++..+..|+++.+.+ +.+.+...
T Consensus 241 ~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~--- 312 (451)
T PRK06918 241 FVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE--IMDESAPG--- 312 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH--HHhccCCC---
Confidence 288999999999999999999987643221111111122 267554 5788876677899887643 22222110
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCC
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRH 416 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~ 416 (499)
.. ..+-....+...+ ++..+..+. ..++..++.+++.+.|++ .|.+.-+ ...
T Consensus 313 ~~-----------------~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~ 371 (451)
T PRK06918 313 EL-----------------GGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDV-RGL 371 (451)
T ss_pred Cc-----------------CcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceee-ccc
Confidence 00 0011112344444 444332333 334444555555555544 3322212 223
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
..++.+.+..+.. ..........++.+.+.++|..+.....+ + .++|+++. ...|+++|++++++|.++++++..
T Consensus 372 G~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-~-~~lrl~p~-l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 372 GAMCAFELVQDRK-TKEPDKTLTANICKEANKRGLLLLSAGTY-G-NVIRVLMP-LVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred eeEEEEEEccCCC-cCCCcHHHHHHHHHHHHHCCeEEeecCCC-C-CEEEEECC-CccCHHHHHHHHHHHHHHHHHHHH
Confidence 3444444421100 00001244677888888899765443222 2 56999983 457899999999999999987643
No 351
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.29 E-value=5.9e-09 Score=106.94 Aligned_cols=311 Identities=10% Similarity=0.004 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
..++.+.++++++-+-+ ...++.+||+|+..|+..||...... +..+ ++.+|..+...|-...-+..+.|-
T Consensus 90 ~~~la~~l~~~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNALD-------CVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 34455668887743212 35899999999999999999764221 0001 223444555556544333333221
Q ss_pred ----------CCCCeEEeeCCCCCCC-----ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCcccc----cCChhHHHH
Q 010842 211 ----------SPANIRALPTSVDANF-----SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTA----VDNVEPLAE 270 (499)
Q Consensus 211 ----------g~~~v~~v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~----id~l~~I~~ 270 (499)
....+..+|.... .+ .-|++++++.+.+. +..+.+|++--. ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAPQN-RFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCCCc-cccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0012223332211 11 11567777777532 223334444432 333332 377999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC--ccCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD--PEYLKNK 347 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~--~~yl~~~ 347 (499)
+|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ .++.++.+++ +.+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK--VAQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH--HHHHHhcCCCCccccCC
Confidence 99999999999999865422111111112344 3787775 78876553 4677766543 22333221 1111110
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEec
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLN 425 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~ 425 (499)
+. .+.+..+....++++.+..+ +..++..++.++|.+.|+++.....+.. ....++.+.+.
T Consensus 312 -------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 312 -------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred -------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence 00 12222233344445544322 3467777888888888876532111111 12344455553
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
... ....+.+++.++|..+ .+. + ..+|++.. ..+|++|||++++++.+...
T Consensus 375 ~~~---------~~~~~~~~l~~~Gv~~-~~~---~-~~l~~~pp-l~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 375 KPV---------NVEELQKKFVEQGVWI-RPF---G-KLIYVMPP-YIITTEQLQKLTAALIEALH 425 (427)
T ss_pred Ccc---------CHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 221 1356788888889543 322 1 35898873 66899999999999998864
No 352
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=9e-09 Score=105.45 Aligned_cols=318 Identities=10% Similarity=0.025 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..+.++.+.|++++..+.+ ...|+++||+|+-.|+..||.....+ +..+ ++.+|......|-...-+..+.
T Consensus 87 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 157 (429)
T PRK06173 87 EPAVELAQKLLEILPPSLN-------KIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC 157 (429)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence 3445555667777632111 34899999999999999999753221 1001 1223344444565433232221
Q ss_pred C--------C--CCCCeEEeeCCCCC---CC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CChhHHH
Q 010842 209 G--------V--SPANIRALPTSVDA---NF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNVEPLA 269 (499)
Q Consensus 209 G--------~--g~~~v~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l~~I~ 269 (499)
| . ....+..+|..... .+ .-+++.|++.+.. .+..+.+|++--. ....|.+ +=+++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~ 234 (429)
T PRK06173 158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR 234 (429)
T ss_pred CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence 1 1 01123445432110 00 1146667777753 2234545555442 3444555 2279999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc--cCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP--EYLKN 346 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~--~yl~~ 346 (499)
++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..+ .++.++.+++ +.+.+.... .+...
T Consensus 235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~--i~~~~~~~~~~~~~~~ 309 (429)
T PRK06173 235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMCI--GKALTGGYLTLSATITTEA--IAQTICSGEAKCFMHG 309 (429)
T ss_pred HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEEe--ehhhhCCccccceEEecHH--HHHHHhcCCCCccccC
Confidence 999999999999999866422111111112344 3788874 78876553 5777777654 223332110 01111
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEe
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRL 424 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~ 424 (499)
. |. .+.+..+....++|+.+-.+ ...++..++.++|.+.|+++.++..+.+ ....++.+.+
T Consensus 310 ~-------------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel 372 (429)
T PRK06173 310 P-------------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEM 372 (429)
T ss_pred C-------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEe
Confidence 0 00 11222233444455554333 3466777888888888875433332222 2334555555
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.... ....+.+.+.++|..+ .+. + ..+|+... ...|++||++++++|.++..++.+
T Consensus 373 ~~~~---------~~~~i~~~l~e~Gi~v-~~~---g-~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 373 KEPV---------NMATLQPRFVEHGIWV-RPF---G-KLVYIMPP-FIISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred CCcc---------cHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence 4321 1456788888888543 322 2 47999884 778999999999999999887654
No 353
>PRK06148 hypothetical protein; Provisional
Probab=99.29 E-value=2.7e-08 Score=112.14 Aligned_cols=324 Identities=12% Similarity=0.078 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
...+.++.+.|++++.-+.+ -..|++||||||..|+..||... | ++.+|.....-|-...-+..+
T Consensus 662 ~~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t-------G-r~~ii~~~~~YHG~t~~a~s~ 726 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT-------G-QRDAIVLDHAYHGTTTELIDL 726 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEEcCCccCCCcchhhc
Confidence 34455556668877742212 24899999999999999999753 1 122333344445443322222
Q ss_pred h--------CCC-CCCeEEeeCCC--CCCCc-cC-------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842 208 A--------GVS-PANIRALPTSV--DANFS-LS-------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---- 264 (499)
Q Consensus 208 ~--------G~g-~~~v~~v~~~~--~~~~~-~d-------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---- 264 (499)
. +.+ ...+..++... ...|. -+ .+.+++.++.....+..+.+|++--....-|.+-|
T Consensus 727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y 806 (1013)
T PRK06148 727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY 806 (1013)
T ss_pred CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence 1 111 12333333211 01111 11 24566666543333445666666655555677766
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
++++.++|++||+.+++|.++.|+...... +.....|+ ..|.+++ -|.++..+..|.++.+++ +.+.+.....+
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~ 881 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEY 881 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--HHhhccCCCcc
Confidence 899999999999999999998776433221 11222354 3898888 688877678899988753 22333211001
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALV 420 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v 420 (499)
. + .-.+.+..+....++|..+..+ +..++..++.++|.+.|+++. ...++.. -...++
T Consensus 882 ~-~---------------Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~ 942 (1013)
T PRK06148 882 F-N---------------TFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFL 942 (1013)
T ss_pred c-c---------------CCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEE
Confidence 0 0 0112222222333344444333 355666677777777776531 1111111 112233
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+.+..+.. +.+........+.+++.++|.++ .+... ...++|+... ..+|++|||+++++|.++..++.
T Consensus 943 gvel~~~~~-~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~-~~~vlr~~Pp-l~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 943 GIELVTDRK-TKAPATAIARYVKNGARERGILI-GTEGP-HDNVLKIRPP-LIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred EEEecCCcc-ccCccHHHHHHHHHHHHhCCeEE-eccCC-CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHh
Confidence 444432110 00111345677888899999654 32211 1266999884 77899999999999999987764
No 354
>PRK06917 hypothetical protein; Provisional
Probab=99.29 E-value=3.4e-08 Score=101.85 Aligned_cols=334 Identities=10% Similarity=0.018 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~ 205 (499)
++.+.++.+.|++++....+ ..+|+++||+|+..|+..||...... |. .+..|+ ....-|-...-+.
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r----g~t~r~~ii~~~~~yHG~t~~al 141 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER----GIQGKHKILSRWMSYHGITMGAL 141 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCccHHHH
Confidence 45556667778888743222 24889999999999999998753221 11 233343 3444465544444
Q ss_pred HHhCCCC---------CCeEEeeCCCCCCCc----------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccC--
Q 010842 206 KLAGVSP---------ANIRALPTSVDANFS----------LSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVD-- 263 (499)
Q Consensus 206 ~~~G~g~---------~~v~~v~~~~~~~~~----------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id-- 263 (499)
...|... ..+..+|........ -+.+.|++.++... ...+.+|++.-..... |.+-
T Consensus 142 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~ 219 (447)
T PRK06917 142 SMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPP 219 (447)
T ss_pred HhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCC
Confidence 4433210 122333321100000 02456666665311 1234455554433323 3442
Q ss_pred --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842 264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~ 340 (499)
=+++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++..+ ..|++..+++ +.+.+...
T Consensus 220 ~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~-PDi~~~--gK~l~~G~~Pi~a~~~~~~--i~~~~~~~ 294 (447)
T PRK06917 220 KGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE-PDIMTL--GKGLGAGYTPIAATVVSDR--VMEPILRG 294 (447)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC-CCEEEe--eehhccCCcceEEEEEcHH--HHHHHhcc
Confidence 2799999999999999999998775332222222223443 788777 68887654 5778777653 22333221
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF 417 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~ 417 (499)
...+.... ...+.+.......++++.+..+ +..++..++.++|.+.|+++. ...++.. -..
T Consensus 295 ~~~~~~~~-------------T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 358 (447)
T PRK06917 295 SRSIMSGH-------------TLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKG 358 (447)
T ss_pred Cccccccc-------------CCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Confidence 11111100 0111222223333444444333 355666677777777766531 1212211 112
Q ss_pred eEEEEEecCCCC-CCc-chhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPH-SGS-ADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 418 ~~v~f~~~~~~~-~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++.+.+..+.. .+. .........+...+.++|.++..... -.....+|++.. ..+|++||+.+++++.++.++
T Consensus 359 l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Pp-l~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 359 LLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPP-MTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred eEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence 233344422110 000 01124567788889999965432110 011357898873 668999999999999999988
Q ss_pred Hhcc
Q 010842 493 LFKG 496 (499)
Q Consensus 493 l~~~ 496 (499)
+.++
T Consensus 438 ~~~~ 441 (447)
T PRK06917 438 MMQK 441 (447)
T ss_pred HHHh
Confidence 7554
No 355
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=2.2e-08 Score=103.28 Aligned_cols=326 Identities=10% Similarity=0.065 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+.|+++++-+.. ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus 97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~ 167 (453)
T PRK06943 97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT 167 (453)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence 3444556668887753212 24899999999999999998653211 0001 1223444444565443333333
Q ss_pred CCC---------CCCeEEeeCCCCCC--Cc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccC----C
Q 010842 209 GVS---------PANIRALPTSVDAN--FS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVD----N 264 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id----~ 264 (499)
|-. ...+..+|...... +. -++++|++.++. .+..+.+|++.- .....|.+- =
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~y 244 (453)
T PRK06943 168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSY 244 (453)
T ss_pred CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHH
Confidence 210 01234454321100 00 134667777652 223455555543 234456652 2
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
++++.++|++||+.+++|.++.|+.....-+.....|+. .|.+++ -|.++..+ ..|.++++++ +.+.+.....
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~-PDivt~--gKgl~gG~~Pi~av~~~~e--i~~~~~~~~~- 318 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVW-PDFLCL--SKGISGGYLPLSLVLSRDA--IFAAFYDDDV- 318 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCC-CCeEee--ehhhccCcccceEEEEcHH--HHHhhcccCc-
Confidence 799999999999999999998776433222222223553 899998 58776653 6888888764 2233321100
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALV 420 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v 420 (499)
.. .+....+....++...+++..+..-.-++.+++..++.++|.+.|+++ |.+.-+. -...++
T Consensus 319 -~~------------~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~ 384 (453)
T PRK06943 319 -TR------------GFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIF 384 (453)
T ss_pred -cC------------CccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEE
Confidence 00 000111222234554444444321111235566677777777777654 3332111 112233
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.+.+.... ........++.+++.++|.++ .+. + ..+|++.. ...|++||++++++|.+..+++..+
T Consensus 385 gvel~~~~----~~~~~~~~~i~~~~~~~Gll~-~~~---g-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~ 450 (453)
T PRK06943 385 AFDVALDG----DAARTFSRRFFEAALERELLL-RPI---G-TTVYLMPP-YVLDDDEIAWLAERTRATLDATLAE 450 (453)
T ss_pred EEEEccCC----CcchHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34443211 001234677888888999654 221 2 35899863 6689999999999999998887543
No 356
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=1.9e-08 Score=103.44 Aligned_cols=309 Identities=10% Similarity=0.025 Sum_probs=165.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--------hh----------hccC
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--------GA----------ENMH 187 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--------~~----------~g~~ 187 (499)
...++.+.+.+.+++++.-+.+ ..+|++||||||..|+..||....... ++ .|-+
T Consensus 102 ~~~~la~~l~~~l~~~~p~~~~-------~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~ 174 (464)
T TIGR00699 102 PSKDWAKILKEGILKVAPKGQD-------QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSP 174 (464)
T ss_pred HHHHHHHHHHHhHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCc
Confidence 3344555544444555531111 248999999999999999986532110 00 0111
Q ss_pred C-eEEEcCCCCchhHHHHHHHhCCCC--------CCeEEeeCCCC-CCC-----------ccCHHHHHHHHHHHHHcCCc
Q 010842 188 K-LVVYGSDQTHSTFAKVCKLAGVSP--------ANIRALPTSVD-ANF-----------SLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 188 ~-~~i~~s~~~H~s~~ka~~~~G~g~--------~~v~~v~~~~~-~~~-----------~~d~~~L~~~i~~~~~~g~~ 246 (499)
+ .+|......|-...-+....|-.. ..+..+|.... ..+ .-+++.|++.+++ .+..
T Consensus 175 r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~ 251 (464)
T TIGR00699 175 DLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKP 251 (464)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCc
Confidence 2 244444555766555555444210 11223333210 000 0135566676653 2233
Q ss_pred cEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccccCCCc
Q 010842 247 PLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWLLSYLD 321 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p~~ 321 (499)
+.+|++--.....|.+-| +++|.++|++||+.+++|.++.|+.....-+.....|+. +.|.+++ -|.++.
T Consensus 252 iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~--- 326 (464)
T TIGR00699 252 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT--- 326 (464)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc---
Confidence 556666665666688877 999999999999999999998765332221122233554 5888877 576631
Q ss_pred ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
.|++..++ .+.....+.. ..+-....+... ++|..+-.+ +..++..++.++
T Consensus 327 gG~~~~~~------~~~~~~~~~~-----------------~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~ 380 (464)
T TIGR00699 327 AGYFFHDP------AFRPNKPYRQ-----------------FNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDY 380 (464)
T ss_pred CCccccch------hccCCCCccc-----------------ccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 23332221 1110000000 011112233333 344444333 344555566666
Q ss_pred HHHHHhc----CCC-eEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCC
Q 010842 399 FEGFVKS----DPR-FEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGAS 472 (499)
Q Consensus 399 l~~~L~~----~~~-~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~ 472 (499)
|.+.|++ .|. +.-+. .....++.+.+.. ......+.+.+.++|.+. ... +...+|+... .
T Consensus 381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~---------~~~~~~i~~~~~~~Gvl~-~~~---g~~~ir~~Pp-l 446 (464)
T TIGR00699 381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD---------EAKRDKLLKKARNNGVNI-GGC---GVKAIRLRPM-L 446 (464)
T ss_pred HHHHHHHHHHhCCCceeeecccCeEEEEEEecCC---------HHHHHHHHHHHHHCCcEE-ecC---CCCeEEEeCC-C
Confidence 6666654 332 22121 1344455555532 233567888888999654 221 4467999984 7
Q ss_pred CCcHHHHHHHHHHHHHH
Q 010842 473 LTDERHVVAAWELIMEG 489 (499)
Q Consensus 473 ~~t~~di~~l~~~l~~~ 489 (499)
.+|++||+.++++|.++
T Consensus 447 ~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 447 VFQKHHADIFLEIISKI 463 (464)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 88999999999999875
No 357
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=4.6e-08 Score=101.15 Aligned_cols=314 Identities=13% Similarity=0.074 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
++.+.++.+.|+++++...+ ...|++|||+|+..|+..||... | ++.+|.....-|-...-++.+
T Consensus 112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~ 176 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT-------G-NFKVVSLWDSFHGASLDAISV 176 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc-------C-CCEEEEEeCCCcCccHHHHhh
Confidence 44555666668888753222 24899999999999999998652 1 222344455556655444444
Q ss_pred hCC-------C--CCCeEEeeCCCCCCCc-----c------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842 208 AGV-------S--PANIRALPTSVDANFS-----L------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--- 264 (499)
Q Consensus 208 ~G~-------g--~~~v~~v~~~~~~~~~-----~------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--- 264 (499)
.|- + ...+..+|... .++ . +++.|++.++. .+ .+.+|++--.....+.+.|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~y 250 (459)
T PRK06082 177 GGEACFRQGMGPLMAGVERIPPAV--SYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAY 250 (459)
T ss_pred cCCcccccCCCCCCCCCEEeCCCc--ccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHH
Confidence 332 0 01234444321 011 1 13456666642 12 3444444433333233444
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
+++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++..+ ..|.++.++. +...+.. .+
T Consensus 251 l~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~--i~~~~~~--~~ 323 (459)
T PRK06082 251 WKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDK--YNTAAQI--SL 323 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhccC--CC
Confidence 89999999999999999999887533221112222355 3888884 78887653 6788887764 2122110 00
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF 417 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~ 417 (499)
. . .+.....+.+. +++..+..+ +.+++..++.++|.+.|+++. ...++.. -..
T Consensus 324 ~-----------------~-~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 382 (459)
T PRK06082 324 G-----------------H-YTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIG 382 (459)
T ss_pred C-----------------C-CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecc
Confidence 0 0 11122334333 344444322 456677777888887776531 1212211 122
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.++.+.+..+.. ...........+...+.++|.++. +. +..++|++.. ...|++||+++++++.++..++.++
T Consensus 383 l~~~ve~~~~~~-~~~~~~~~~~~~~~~~~~~Gvl~~-~~---~~~~i~~~Pp-l~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 383 LLWGVELVTDRH-TKERAYDEAEAVLYRCLNNGLSFK-VS---QGNVIQLSPP-LIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred ceeEEEEccCcc-ccCccHHHHHHHHHHHHhCCCEEE-ec---CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhhh
Confidence 334444432110 001112345677888888996543 21 2356999873 5679999999999999999887554
No 358
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.27 E-value=1.4e-08 Score=105.04 Aligned_cols=302 Identities=12% Similarity=0.062 Sum_probs=164.5
Q ss_pred EEc-CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC-------C--CCCeEEeeCCCCCC-
Q 010842 157 VIQ-NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV-------S--PANIRALPTSVDAN- 225 (499)
Q Consensus 157 ~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~-------g--~~~v~~v~~~~~~~- 225 (499)
+|+ ++||||+..|+..||... | ++.+|......|-...-++.+.|- + ...+..+|......
T Consensus 130 ~f~~~SGSEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 201 (464)
T PRK06938 130 QFCGPTGTDAVEAALKLVKTAT-------G-RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRC 201 (464)
T ss_pred EEeCCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccc
Confidence 454 799999999999998652 1 233444444556554444443321 0 11345565432110
Q ss_pred -C--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccC
Q 010842 226 -F--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACIC 292 (499)
Q Consensus 226 -~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~ 292 (499)
+ ..+.+.+++.+++.......+.+|++--....-|.+-| ++++.++|++||+.+++|.++.|+....
T Consensus 202 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG 281 (464)
T PRK06938 202 PFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG 281 (464)
T ss_pred cccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence 0 02367788877542211123455555544444466533 7999999999999999999987764322
Q ss_pred ccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHH
Q 010842 293 PEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLR 372 (499)
Q Consensus 293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~ 372 (499)
.-+.....|+. .|.+++ -|.++..+..|.++.++. + ..+. +... ..+-....+.
T Consensus 282 ~~~a~e~~gv~-PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~------------------~~T~~gnpla 335 (464)
T PRK06938 282 KMFAFEHAGII-PDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAH------------------AGTFRGNQMA 335 (464)
T ss_pred HHHHHHhcCCC-CCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCC------------------CCCCCcCHHH
Confidence 21222223453 799988 577766677888888753 2 2221 1110 0111123344
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEEEEecCCCCCC----cch-hHHHHHHHHH
Q 010842 373 LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVCFRLNPYPHSG----SAD-TEMLNRKLLD 444 (499)
Q Consensus 373 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~f~~~~~~~~~----~~~-~~~~~~~l~~ 444 (499)
..+++..+..-.-++..++..++.++|.+.|+++. ...++.. -...++.+.+....... ... .......+..
T Consensus 336 ~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (464)
T PRK06938 336 MAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQR 415 (464)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHH
Confidence 44444433211112355666666777777766531 1111211 12233444443211000 000 1234567788
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+.++|.++. +... ...++|+... ...|++||+++++++.++..++..
T Consensus 416 ~~~~~Gll~~-~~g~-~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~~~~~ 463 (464)
T PRK06938 416 ECLRRGLILE-LGGR-HGSVVRFLPP-LIITAEQIDEVAEIFAEAVAAAVA 463 (464)
T ss_pred HHHHCCeEEe-ecCC-CCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 8888996442 2211 1256999874 778999999999999999887653
No 359
>PRK07483 hypothetical protein; Provisional
Probab=99.27 E-value=2.5e-08 Score=102.65 Aligned_cols=331 Identities=11% Similarity=0.053 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc-CCCCchhHHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG-SDQTHSTFAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~-s~~~H~s~~ka~~~ 207 (499)
....++.+.|++++.-..+ ...|+++||+|+-.|+..||...... +. ..+..|+. ....|-...-+..+
T Consensus 73 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~~-g~--~~r~~Ii~~~~~YHG~t~~a~s~ 142 (443)
T PRK07483 73 EPAEALADRLVAAAPAGLE-------HVYFVSGGSEAVEAALKLARQYFVEI-GQ--PQRRHFIARRQSYHGNTLGALAI 142 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CC--CCCcEEEEECCCcCCcCHHHhhh
Confidence 3444555667777632111 24899999999999999998753211 11 12333443 44456554433333
Q ss_pred hCC---------CCCCeEEeeCCCCCCCcc-------------CHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC
Q 010842 208 AGV---------SPANIRALPTSVDANFSL-------------SPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN 264 (499)
Q Consensus 208 ~G~---------g~~~v~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~ 264 (499)
.|- +...+..+|... .|+- .+++|++.+... ....+.+|++--... .-|.+-|
T Consensus 143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~ 218 (443)
T PRK07483 143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP 218 (443)
T ss_pred cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence 221 111234444321 0111 024566555421 112333444433222 2355544
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~ 339 (499)
+++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++..+ ..|.++++++ +.+.+..
T Consensus 219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~ 293 (443)
T PRK07483 219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVA-PDLVTI--AKGLGAGYQPIGAVLASDR--IYDAIAD 293 (443)
T ss_pred CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCC-CCeeee--hhhhccCccccEEEEEcHH--HHHHHhc
Confidence 899999999999999999998776432222222223443 788888 58876654 6888888764 2233322
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEcC--CC
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-PRFEIVVP--RH 416 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~--~~ 416 (499)
.+..+... .+.....+.+.+++..+..-.-++.+++..++.++|.+.|+++ ....++.+ -.
T Consensus 294 ~~~~~~h~----------------~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~ 357 (443)
T PRK07483 294 GSGFFQHG----------------HTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGR 357 (443)
T ss_pred CCCccccC----------------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeec
Confidence 11111110 1112234444444444321111245666677777777777542 12222211 11
Q ss_pred ceEEEEEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEee-eECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHT-IVGG--LYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 417 ~~~v~f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..++.+.+.... .... .........+.+.+.++|.++.... ...+ ...+|+... ...|++|||+++++|.+...
T Consensus 358 Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp-L~it~~eid~~~~~l~~~l~ 436 (443)
T PRK07483 358 GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP-FIITAAQIDEIVERLGDAID 436 (443)
T ss_pred ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 223334432211 0000 0012345678888899996543221 1111 246999884 77899999999999999988
Q ss_pred HHhc
Q 010842 492 RLFK 495 (499)
Q Consensus 492 ~l~~ 495 (499)
++..
T Consensus 437 ~~~~ 440 (443)
T PRK07483 437 AALA 440 (443)
T ss_pred HHHh
Confidence 7654
No 360
>PRK07046 aminotransferase; Validated
Probab=99.26 E-value=3.5e-08 Score=101.78 Aligned_cols=309 Identities=17% Similarity=0.096 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..|.++.+.++++++++. ..|+++||||+..|+..||... | ++.+|-....-|-........
T Consensus 114 ~~~~~~lAe~l~~~~~~~~---------v~F~nSGtEA~e~AlrlAR~~T-------G-r~~ii~~~g~YHG~~d~~l~~ 176 (453)
T PRK07046 114 SEDAAWVGEELARRFGLPY---------WQVATTATDANRFVLRWARAVT-------G-RPKILVFNGCYHGTVDDVFVD 176 (453)
T ss_pred CHHHHHHHHHHHHHhCCCE---------EEEECCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCCCCCcHHhHhh
Confidence 5667777788888886433 3899999999999999999763 1 222333344445442222111
Q ss_pred h------------CCCC---CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842 208 A------------GVSP---ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL 268 (499)
Q Consensus 208 ~------------G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I 268 (499)
. |... ..+..+|. -|++.|++.+.. ..+.+|++--.....|.+-| ++++
T Consensus 177 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~l 244 (453)
T PRK07046 177 LVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEAL 244 (453)
T ss_pred ccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHH
Confidence 1 1100 01122221 278999988842 23445555544445566644 7999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNK 347 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~ 347 (499)
.++|++||+.+++|.++. +-.-.... ....++. .|.+++ -|.++..+.+|++..+++- . +.+... ......
T Consensus 245 r~lc~~~g~llI~DEV~t-fr~g~Gg~-~~~~gv~-PDi~t~--gK~lggG~Pi~av~g~~~i-~-~~~~~~~~~~~~~- 316 (453)
T PRK07046 245 RELTRRYGTLLVIDETHT-ISSGPGGY-TRAHGLE-PDFLVV--GKPIAGGVPCAVYGFSAEL-A-ERAQAAKASAPPG- 316 (453)
T ss_pred HHHHHHhCCEEEEEcccc-CccCCcch-hHHhCCC-ccceee--hhhhcCCCcceeeeehHHH-H-HHHhhccccCCCC-
Confidence 999999999999999874 10000011 1122553 788876 6888766789988887642 2 333210 000000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCceEEEE
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFALVCF 422 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~v~f 422 (499)
......+-....+.+.+++..+..-.-++..++..++.++|.+.|++ .+- +.+..... .+.+
T Consensus 317 -----------~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~--~~~i 383 (453)
T PRK07046 317 -----------HSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGA--RVEF 383 (453)
T ss_pred -----------CceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc--EEEE
Confidence 00111122223444444444332111123455556666666666653 321 12222222 2334
Q ss_pred EecCCCCCCcch-----hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 423 RLNPYPHSGSAD-----TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 423 ~~~~~~~~~~~~-----~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+.+.......+ .......+...+.++|..+ .+. + ..++++. .+|++||+++++++.++.+++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~-~~~---~-~~~~~~p---~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 384 QFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLI-TPF---H-NMMLVCP---ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred EEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEE-ecc---c-CcEEEeC---CCCHHHHHHHHHHHHHHHHHHh
Confidence 332211000000 1234566778888899644 321 1 3466654 3899999999999999988764
No 361
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=4.4e-08 Score=101.43 Aligned_cols=328 Identities=14% Similarity=0.044 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
++...++.+.|++++.-+.+ ...|+++||+|+..|+..||...... +..+ ++.+|.....-|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGLS-------RCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 44555566678887632111 34899999999999999998753211 0001 122344455556555444444
Q ss_pred hCCCC---------CCeEEeeCCCCC--CCc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccCC---
Q 010842 208 AGVSP---------ANIRALPTSVDA--NFS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVDN--- 264 (499)
Q Consensus 208 ~G~g~---------~~v~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id~--- 264 (499)
.|... ..+..+|....- .+. -+++.+++.+.. .+..+.+|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence 33210 123444432100 000 124556766652 233455555554 2344466532
Q ss_pred -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842 265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
+++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++..+ ..|.++++++- .+.+.....
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIR-PDFLCL--SKALTGGYLPLAAVLTTDTV--YQAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCC-CCEEee--ehhccCCcccceEEEecHHH--HHHHhcccc
Confidence 799999999999999999998776433222222233553 899998 58776663 67888877642 233321100
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCc
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHF 417 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~ 417 (499)
-. . .+ ....+.....+.+.+ +|+.+-.+ +.+++..++.++|.+.|+++.....+.. -..
T Consensus 312 ~~--~--------~~---~h~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G 375 (466)
T PRK07030 312 TL--R--------AF---LHSHSYTGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTG 375 (466)
T ss_pred cc--c--------cc---ccCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEece
Confidence 00 0 00 001111123344433 44444333 4567777778888777766422211211 122
Q ss_pred eEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 418 ALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 418 ~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.++.+.+...... .. ........++.+++.++|.++ .+. + ..+|+... ...|++||+.+++.+.+..+++.
T Consensus 376 l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~Pp-l~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 376 MILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALL-RPL---G-SVVYFLPP-YVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred eEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHHHHHHHHHHHHHHHh
Confidence 2344444321100 00 001123457888888999543 321 2 36898873 77899999999999999998874
No 362
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.24 E-value=2.8e-08 Score=102.40 Aligned_cols=296 Identities=13% Similarity=0.069 Sum_probs=154.7
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhcc----CCeEEEcCCCCchhHHHHHHHhCCCCC--------CeEEeeCCCC
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENM----HKLVVYGSDQTHSTFAKVCKLAGVSPA--------NIRALPTSVD 223 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g~~--------~v~~v~~~~~ 223 (499)
..|++||||||..|+..||..........|. +..+|-.....|-...-+....|.... ....+|...
T Consensus 113 v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~- 191 (443)
T PRK08297 113 LFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK- 191 (443)
T ss_pred EEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCC-
Confidence 5899999999999999998653110000121 122344444456554444444332000 000111110
Q ss_pred CCCc--------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEEeeccc
Q 010842 224 ANFS--------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 224 ~~~~--------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
-.+. -+++++++.+.. .+..+.+|++.-.....|.+ +-+++|.++|++||+.+++|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 268 (443)
T PRK08297 192 LRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ 268 (443)
T ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 0000 023445555543 23456666666555555665 56899999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
.|+.....-+.....++ ..|.+++ -|.+ | .|.++++++ +..... ..+.... . ...+
T Consensus 269 tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~--i~~~~~---~~~~~~~--------~----~~~T 324 (443)
T PRK08297 269 TGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRR--VDEVED---NVFAVSS--------R----INST 324 (443)
T ss_pred hccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchH--HHHhhh---hhccCcc--------c----cCCC
Confidence 77533211111112344 3788886 5765 3 333444432 111110 0000000 0 0011
Q ss_pred CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHH
Q 010842 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRK 441 (499)
Q Consensus 366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 441 (499)
-....+.+.+++..+..-.-++.+++..++.+++.+.|++ .|.+-.-......++.+.+.. ......
T Consensus 325 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~---------~~~~~~ 395 (443)
T PRK08297 325 WGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT---------TADRDE 395 (443)
T ss_pred CCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC---------HHHHHH
Confidence 1123344444444332111124556666777777776654 343210112233455555533 223567
Q ss_pred HHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 442 LLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 442 l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+.+.++|.++. +. +...+|++.. ..+|++||++++++|.++.+++
T Consensus 396 ~~~~l~~~Gvl~~-~~---~~~~lr~~P~-l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 396 VIRRLWEEGVLVL-PC---GERSIRFRPA-LTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHCCEEEe-cC---CCCeEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence 8888888895542 21 3356899874 7789999999999999988765
No 363
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.24 E-value=1.8e-08 Score=103.07 Aligned_cols=313 Identities=9% Similarity=-0.021 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~ka~~~ 207 (499)
+...++.+.|+++++-+.+ ...++++||||+..|+..||...... |.++. +|......|-...-+..+
T Consensus 86 ~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~----g~~r~kii~~~~~yHG~t~~a~s~ 154 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK----GEPRQRFLTLRHGYHGDTFGAMSV 154 (428)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCcEEEEECCCcCCCcHhhhcc
Confidence 4455566668887643212 24899999999999999998753111 11222 344444456543333332
Q ss_pred hCC--------C--CCCeEEeeCCCCC---CC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CChhHH
Q 010842 208 AGV--------S--PANIRALPTSVDA---NF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNVEPL 268 (499)
Q Consensus 208 ~G~--------g--~~~v~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l~~I 268 (499)
.|- + ...+..+|..... .+ .-|+++|++.++. .+....+|++--. ....|.+ +.+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l 231 (428)
T PRK07986 155 CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRV 231 (428)
T ss_pred cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHH
Confidence 221 0 0123344432110 01 2366778877753 2223334444332 3333443 349999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYLKN 346 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl~~ 346 (499)
.++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++.. ..+|.++.+++ +.+.+.... ..+..
T Consensus 232 ~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~ 306 (428)
T PRK07986 232 RKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMH 306 (428)
T ss_pred HHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCcccc
Confidence 9999999999999999866422111111112344 2688874 6887655 35666666643 223332211 00000
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEe
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRL 424 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~ 424 (499)
. .+. .+.+..+....++|+.+-.+ +..++..++.++|.+.|+++.....+.+ -...++.+.+
T Consensus 307 ~------------~T~-~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~ 370 (428)
T PRK07986 307 G------------PTF-MGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET 370 (428)
T ss_pred C------------CCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence 0 001 12222233444455555333 3466777778888887776422222211 1122344444
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.... ....+.+.+.++|..+ .+. | ..+|++.. ...|++||++++++|.++.+
T Consensus 371 ~~~~---------~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~Pp-l~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 371 TRPV---------NMAALQRFFVEQGVWI-RPF---G-KLIYLMPP-YIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred CCcc---------cHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Confidence 3211 1356778888889644 221 3 46999874 67899999999999988754
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.23 E-value=8.6e-08 Score=99.14 Aligned_cols=322 Identities=14% Similarity=0.070 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~ 205 (499)
+..+.++.+.|++++.... .. .-.++++|||||+..|+..||... .+..|+ .....|-...-+.
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~~-----~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~al 165 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKEY-----CLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGAL 165 (459)
T ss_pred CHHHHHHHHHHHHhCCCccccc-----eEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHH
Confidence 4555566677888774321 10 012445899999999999998753 222343 3444455444444
Q ss_pred HHhCCC---------CCCeEEeeCCCCCCCc--------cCHHHHHHHHHHHHH----cCCccEEEEEecCCCcccccCC
Q 010842 206 KLAGVS---------PANIRALPTSVDANFS--------LSPQLLRRAVEADVE----AGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 206 ~~~G~g---------~~~v~~v~~~~~~~~~--------~d~~~L~~~i~~~~~----~g~~p~~vv~t~gtt~~G~id~ 264 (499)
.+.|-. ...+..+|... .++ -+.+.+++.+++... ....+.+|++--.....|.+-|
T Consensus 166 s~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~ 243 (459)
T PRK06931 166 AVTGNLSPKNAVNGLMPGVQFMPYPH--EYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPA 243 (459)
T ss_pred hhcCCcccccCCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCC
Confidence 333210 11345555432 111 134555544444332 1233455555444444465533
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
++++.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+..|++..++. + +.+.
T Consensus 244 ~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~-- 315 (459)
T PRK06931 244 PVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ-- 315 (459)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--
Confidence 89999999999999999999877643322222222344 3898888 577765566777776642 2 2221
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCC
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRH 416 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~ 416 (499)
+....+ |. .+.+..+....++|..+..++ ..++..++.++|.+.|++ .|.+.-+ .-.
T Consensus 316 ~~~~~~--------------T~-~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~ 376 (459)
T PRK06931 316 PGGHTG--------------TF-RGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNV-RGR 376 (459)
T ss_pred CCCCCC--------------CC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecC
Confidence 110000 11 122222223334444443333 445566666666666654 3321111 112
Q ss_pred ceEEEEEecCCCCCC----cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSG----SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~----~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..++.+.+....... ... .......+...+.++|.++. +... ...++|+... ...|++||+++++++.++..
T Consensus 377 Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~-~~~~-~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 377 GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLE-RGGR-NGNVVRLLPP-LLITQAECEEFIDRFEQALL 453 (459)
T ss_pred ceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEe-ecCC-CCCEEEEECC-CCcCHHHHHHHHHHHHHHHH
Confidence 233444443211000 000 12345677888888996542 2211 1356998884 77899999999999999988
Q ss_pred HHhc
Q 010842 492 RLFK 495 (499)
Q Consensus 492 ~l~~ 495 (499)
++.+
T Consensus 454 ~~~~ 457 (459)
T PRK06931 454 AAVK 457 (459)
T ss_pred HHHh
Confidence 7765
No 365
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=9.7e-08 Score=98.85 Aligned_cols=332 Identities=10% Similarity=0.049 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+..+.++.+.|++++....+ ...|+++||+|+..|+..||...... +..| ++.+|.....-|-...-+..+
T Consensus 98 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGLK-------KVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence 34445566668887743211 24899999999999999998753211 1011 122344455556655444444
Q ss_pred hCCC---------CCCeEEeeCCCCC--CCc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc----C
Q 010842 208 AGVS---------PANIRALPTSVDA--NFS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV----D 263 (499)
Q Consensus 208 ~G~g---------~~~v~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i----d 263 (499)
.|-. ...+..+|....- .+. -+++.+++.++. .+..+.+|++-- .....|.+ +
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 245 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKG 245 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHH
Confidence 3321 0123445432100 001 135566666652 223455555543 23444655 2
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
=++++.++|++||+.+++|.++.|+.....-+.....++. .|.+++ -|.++..+ ..|.++.+++- .+.+...
T Consensus 246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~-PDiv~~--gK~l~gG~~Pi~av~~~~ei--~~~~~~~-- 318 (460)
T PRK06916 246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVT-PDIMTA--GKGLTGGYLPIAITVTTDEI--YNAFYGD-- 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCC-CCeeee--ehhhhcCccccceeeecHHH--HHHhhcc--
Confidence 2799999999999999999998765332222122223443 788876 58776553 67888887642 2222211
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV 420 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v 420 (499)
+.... .+. ...+.....+.+.+++..+..-.-+...++..++.+++.+.|+++.....+.+ -...++
T Consensus 319 ~~~~~--------~~~---~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQK--------TFF---HGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccC--------ccc---cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 10000 000 01111123444444444332111123567777888888888876532221211 111223
Q ss_pred EEEecCCCCC-Ccch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 421 CFRLNPYPHS-GSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 421 ~f~~~~~~~~-~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+.+..+... +... ......++...+.++|.++ .+. + ..+|+.. ...+|++||+++++++.+..+++..
T Consensus 388 giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 388 GIELVKNKETKEPFEWTERVGVQVCKRSRELGMLT-RPL---G-NTIVFMP-PLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred eEEeecccccccCCCchhhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHHhhcc
Confidence 3333221100 0000 1123457888888899544 221 2 4688887 3778999999999999999887654
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=7.1e-08 Score=99.87 Aligned_cols=327 Identities=13% Similarity=0.056 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHcCCCC---ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPK---TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~---~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
....++.+.|++++.-.. .. ....|+++||+||-.|+..||...... +..+ ++.+|......|-...-+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal 179 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL 179 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence 344556666877764210 00 135899999999999999999764221 1011 2233444545565544443
Q ss_pred HHhCCC---------CCCeEEeeCCCCCCCcc------------CHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc-
Q 010842 206 KLAGVS---------PANIRALPTSVDANFSL------------SPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV- 262 (499)
Q Consensus 206 ~~~G~g---------~~~v~~v~~~~~~~~~~------------d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i- 262 (499)
...|.. ...+..+|.... ++. +++.+++.++. .+..+.+|++-- .....|.+
T Consensus 180 s~~~~~~~~~~~~p~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~ 254 (472)
T PRK08742 180 AVGDIPLYRRVYAPLLLESLFAPSPDA--YLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRM 254 (472)
T ss_pred hccCCcccccccCCCCCCCEEeCCCCc--cccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCccc
Confidence 333321 012344544211 111 35666666642 223444555543 23344654
Q ss_pred ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhc
Q 010842 263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~ 338 (499)
+=++++.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++..+ ..|.++++++ +.+.+.
T Consensus 255 ~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e--i~~~~~ 329 (472)
T PRK08742 255 HHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ--LYDAFL 329 (472)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH--HHHHhh
Confidence 2279999999999999999999877643322222222355 3899988 58876553 5777777654 223332
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP- 414 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~- 414 (499)
.... .. .+ ....+.....+...+ +|..+-.++ .+++..++.++|.+.++.+....++.+
T Consensus 330 ~~~~---~~--------~~---~h~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dv 392 (472)
T PRK08742 330 DDSR---ER--------AF---LHSHSYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADV 392 (472)
T ss_pred ccCc---cC--------cc---CcCCCCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence 1100 00 00 001111223344433 444443333 445555556666555544322222211
Q ss_pred -CCceEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 415 -RHFALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 415 -~~~~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
-....+.+.+..+... +. .........+.+++.++|.++ .+. | ..+|+... ...|++||++++++|.+..+
T Consensus 393 RG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~vi~~~Pp-L~it~~ei~~~~~~l~~~l~ 466 (472)
T PRK08742 393 RQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVL-RPL---G-DVLYWMPP-YCVDEAQLALLADTTRHAID 466 (472)
T ss_pred eccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 1222344444321100 00 001123466778888889554 221 3 46999884 77899999999999999988
Q ss_pred HHhc
Q 010842 492 RLFK 495 (499)
Q Consensus 492 ~l~~ 495 (499)
++..
T Consensus 467 ~~~~ 470 (472)
T PRK08742 467 EAVA 470 (472)
T ss_pred HHhc
Confidence 7653
No 367
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=6.7e-09 Score=98.42 Aligned_cols=324 Identities=13% Similarity=0.113 Sum_probs=194.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccE-EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEE---EcCCCC
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGG-VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVV---YGSDQT 197 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g-~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i---~~s~~~ 197 (499)
....-..++|.-+.+.-.+.||++++.| |. +-.-+||-||+..-.+... |..+| -.+...
T Consensus 79 GGne~ID~iE~LCq~RALeaF~ldp~kW-----GVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~GG 142 (477)
T KOG2467|consen 79 GGNEYIDQIELLCQKRALEAFGLDPEKW-----GVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSGG 142 (477)
T ss_pred CcchHHHHHHHHHHHHHHHHhCCCHHHC-----ceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCC
Confidence 3344667888888888899999987642 22 3445888899866655432 33333 245556
Q ss_pred chhHHHHH---HHhCCCCCCeE----EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842 198 HSTFAKVC---KLAGVSPANIR----ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE 270 (499)
Q Consensus 198 H~s~~ka~---~~~G~g~~~v~----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ 270 (499)
|.|.--.. ++... .+. ...+|++ ++-||.|.||+.-.. .+|.+|+ +|++...-.-|...+.+
T Consensus 143 HLsHGy~T~~kkISa~---SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~-----frPk~ii--aG~SaY~R~~DYaR~R~ 211 (477)
T KOG2467|consen 143 HLSHGYQTPTKKISAT---SIYFESMPYKVDPS-TGYIDYDKLEKTATL-----FRPKLII--AGTSAYSRLIDYARFRK 211 (477)
T ss_pred ccccccccCCceeeee---eeecccCceeeCCC-CCceehHHHHHHHHh-----cCCcEEE--eccccchhhccHHHHHH
Confidence 65522111 11111 111 1233433 468999999987544 3465544 45566777789999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPS 349 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~ 349 (499)
||.+.|..|.+|-||-.+........ .-++.+|.++...||.|.+|.| |++++|..-.-...- .....|
T Consensus 212 Iad~~gA~Lm~DMAHISgLVAA~vip---sPFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~y------ 281 (477)
T KOG2467|consen 212 IADKVGAYLMADMAHISGLVAAGVIP---SPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILY------ 281 (477)
T ss_pred HHHhcCceeehhhhhHHHHHhcccCC---CcccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCccee------
Confidence 99999999999999855433221111 1256799999999999999964 566666532110000 001111
Q ss_pred CCCCcccCCCc-ccCCCCCCCcH-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecC
Q 010842 350 ESNSVVDFKDW-QVGTGRRFKSL-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNP 426 (499)
Q Consensus 350 ~~~~~~~~~~~-~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~ 426 (499)
+.+...++.-+ ++|+|.....+ .+..+|+.-....+.+..++...+++.|.+.|.+. |++++.. .+...+.+.+.+
T Consensus 282 dlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 282 DLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred chhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccc
Confidence 11122233222 56666665544 56678888888889999999999999999999987 8998853 566677777776
Q ss_pred CCCCCcchhHHHHHHHHHHH----HhcCCEEEEeeeECCEEEEEEec---cCCCCcHHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWV----NSTGRVYLTHTIVGGLYMLRFAV---GASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l----~~~g~~~~~~~~~~g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+ .+. ...+++++.+ ++.- +.+....-..+.+|+.. +.-...++|.+++.+-|.+.+
T Consensus 361 ~G-~dG----arvE~vle~~~I~~NKNt--vpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 361 KG-VDG----ARVEKVLELCHIALNKNT--VPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred cC-Cch----HHHHHHHHHhhhhhcCCc--CCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 54 122 2234444443 1211 11111111224588865 122235688887777775544
No 368
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.17 E-value=4.8e-08 Score=99.95 Aligned_cols=307 Identities=10% Similarity=-0.009 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCe-EEEcCCCCchhHHHHHHH
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKL-VVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~-~i~~s~~~H~s~~ka~~~ 207 (499)
...++.+.|+++++.+.+ ...|+++||+|+-.|+..||...... |. .+. +|......|-...-+..+
T Consensus 84 ~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~als~ 152 (422)
T PRK05630 84 PAIKLTRKLLNLTDNGLD-------HVFYSDSGSVSVEVAIKMALQYSKGQ----GHPERTRLLTWRSGYHGDTFAAMSV 152 (422)
T ss_pred HHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCccHHHhcc
Confidence 344455667777642211 24899999999999999998753211 11 123 344455556544444333
Q ss_pred hCC--------C--CCCeEEeeCCCCCCCccCH-------HHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CCh
Q 010842 208 AGV--------S--PANIRALPTSVDANFSLSP-------QLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNV 265 (499)
Q Consensus 208 ~G~--------g--~~~v~~v~~~~~~~~~~d~-------~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l 265 (499)
.+- + ...+..+|.... ...+. +.+++.+.+ .+.+|++.-. ....|.+ +.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l 224 (422)
T PRK05630 153 CDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALI 224 (422)
T ss_pred CCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHH
Confidence 221 0 013344544311 11122 233333322 2334444331 3334544 568
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC--cc
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD--PE 342 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~--~~ 342 (499)
++|.++|++||+.+++|.++-|+.....-+.....++ ..|.+++ -|.++.. ...|+++.+++ +.+.+... ..
T Consensus 225 ~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~ 299 (422)
T PRK05630 225 EGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK--VAQLISTPNGGG 299 (422)
T ss_pred HHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHH--HHHHHhccCCCC
Confidence 9999999999999999999866532211111112344 3788866 6888554 24677766653 22333211 00
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV 420 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v 420 (499)
.+... . |. .+.+..+....++++.+..+ ...++..++.++|.+.|+.+.....+.+ -...++
T Consensus 300 ~~~h~----------~--T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~ 363 (422)
T PRK05630 300 ALMHG----------P--TF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIG 363 (422)
T ss_pred ccccC----------C--CC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEE
Confidence 00000 0 00 12122223334445555333 3455667777777776664322111111 123344
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.+.+.... ....+.+.+.++|..+ .+. + .++|+... ..+|++|||+++++|.++.+
T Consensus 364 ~ie~~~~~---------~~~~~~~~~~~~Gl~~-~~~---g-~~l~~~Pp-L~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 364 VVEMEQPV---------DMEEATQAAVDHGVWL-RPF---G-RLVYVMPP-YITTSEQIAQICAALAAAVK 419 (422)
T ss_pred EEEECCcc---------cHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHHHHHHHHHHHHh
Confidence 45553211 1346777888889543 221 3 47898874 67899999999999998764
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=3.1e-09 Score=101.57 Aligned_cols=307 Identities=14% Similarity=0.061 Sum_probs=191.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
.-.+|+. +++.+|.+++ ++.+-|-.++..++.+... .+++|++.+..++.+.++.+
T Consensus 141 HldlE~~----iakF~G~E~a---------ivYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~Glq 196 (467)
T KOG1358|consen 141 HLDLEKR----IAKFMGTEDA---------IVYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQ 196 (467)
T ss_pred ecccHHH----HHHhhCCcce---------eeeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHh
Confidence 3456666 9999999876 5555444333334444322 47789999999999999887
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH----HcCC---ccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV----EAGL---VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~----~~g~---~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
+.-- .+++.. ..|+++|++.+.+.+ +..+ .-.+||+..-.-++|.+-|+.+|.++..+|...+
T Consensus 197 lSRS---~i~~Fk-------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~Rv 266 (467)
T KOG1358|consen 197 LSRS---TISYFK-------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRV 266 (467)
T ss_pred hhhh---eeEEec-------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEE
Confidence 7655 666654 448888888775433 2222 1236777777788999999999999999999999
Q ss_pred EeeccccchhccC-cc--chhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 280 HVDAAYAGSACIC-PE--FRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 280 hvD~A~g~~~~~~-~~--~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
++|..|..+.+.. .. ..+...++...|.++.+.--.+.. +.|+..-+.--...+.++. .+|.+.
T Consensus 267 ildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLSg-~~Y~fS---------- 333 (467)
T KOG1358|consen 267 ILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLSG-SGYCFS---------- 333 (467)
T ss_pred EEecccccccccccCccccccCCCCccceeeeeecccccccc--cCceeecceeeEeeeeccc-cceeee----------
Confidence 9999887654321 00 011222355688888887555432 2233222211001111111 123222
Q ss_pred CCCcccCCCCCCC---cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcc
Q 010842 357 FKDWQVGTGRRFK---SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA 433 (499)
Q Consensus 357 ~~~~~~~~sr~~~---al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 433 (499)
+..- +-++..++..+ +.-.++++........+.+.|+...++++...+.++++-.++.+.. .+-+
T Consensus 334 ---------AslPp~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~-~s~e 401 (467)
T KOG1358|consen 334 ---------ASLPPYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY-GSRE 401 (467)
T ss_pred ---------ccCchhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc-cchH
Confidence 1111 12222233332 3333466667777788888998888899999999999888876632 1112
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEeeeEC------CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGRVYLTHTIVG------GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+-..+-+.+.++...++........+. -..-+|+|+ +...+++||+++.+.|++.+..+
T Consensus 402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 223445667777666665443322221 124699999 58899999999999999988764
No 370
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.17 E-value=5.5e-08 Score=99.99 Aligned_cols=289 Identities=12% Similarity=0.052 Sum_probs=146.9
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhcc----CCeEEEcCCCCchhHHHHHHHhCCC-CCC---e----EEe--e--
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENM----HKLVVYGSDQTHSTFAKVCKLAGVS-PAN---I----RAL--P-- 219 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g-~~~---v----~~v--~-- 219 (499)
..|+++||||+..|+..||....+.....|. ++.+|-....-|-...-+....|.. ... . ..+ |
T Consensus 106 v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 185 (431)
T TIGR03251 106 LFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKL 185 (431)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcc
Confidence 4899999999999999998653110000121 1223444445565554444443421 000 0 001 1
Q ss_pred ---CCCCCCCc-------cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEEeeccc
Q 010842 220 ---TSVDANFS-------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 220 ---~~~~~~~~-------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.+.+. .. -+++++++.+.. .+..+.+|++.-.....|.+ +.+++|.++|++||+.+++|+++
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 186 TFPLDAPN-LDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred cCCccccc-cchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 11000 00 123344444432 23456677777655556765 46899999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch-hHHH-hhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG-LLVK-ALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~-~l~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
.|+.....-+.....++ ..|.+++. |.+ | .+|++ .+++- .... .+.. +.... .+ -
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~~-~~~~~--------------~T-~ 318 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFAV-PSRLN--------------ST-W 318 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhcccC-ccccC--------------CC-C
Confidence 87533211111112344 38888864 443 3 34444 33321 1100 0100 00000 01 1
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
.+.+.......+++..+..++ ..++..++.+++.+.|++ .|++..-......++.+.+.+ ....
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~---------~~~~ 386 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS---------TADR 386 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC---------HHHH
Confidence 111212223334444443333 334444555555555543 332211111223445555533 2235
Q ss_pred HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
..+.+.+.++|.++. +. +...+|+++ +..+|++||++++++|.+
T Consensus 387 ~~~~~~l~~~Gvl~~-~~---g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 387 DEVIRQLYREGVLLL-GC---GERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHhCCeEEe-cC---CCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 678888888896542 21 335699988 478999999999999876
No 371
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.15 E-value=1.2e-08 Score=97.69 Aligned_cols=306 Identities=11% Similarity=0.054 Sum_probs=177.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFA 202 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~ 202 (499)
+.....+-.++.+.++++++.|+++ --+++.+|+|...-++.+..... .+. -|....-+.++..
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~Y-----~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~~ 109 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDDY-----KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAIK 109 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHHH
Confidence 3445566667788899999999986 23455666776555555544321 111 1222222233344
Q ss_pred HHHHHhC-CCCCCeEEeeCCCCCC-CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEE
Q 010842 203 KVCKLAG-VSPANIRALPTSVDAN-FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWV 279 (499)
Q Consensus 203 ka~~~~G-~g~~~v~~v~~~~~~~-~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~l 279 (499)
.+-++.. . .+..+.....+. .-.+++..+ +.++. .+|+.+...|.+|+--| ...+.. + ..+
T Consensus 110 eA~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~---~--~~~ 173 (365)
T COG1932 110 EAKKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS---D--GLL 173 (365)
T ss_pred HHHHhcccc---cccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC---C--ceE
Confidence 4433332 2 222222111111 133444333 22221 26889998999998633 233221 1 789
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCC-CCCCCcccC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKP-SESNSVVDF 357 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~ 357 (499)
++|+.-+.+.... .+.+.|.|.++.+|.++ |-|.+++++|+.. +.+.-+. .|.-+.... .+.+.
T Consensus 174 v~D~SS~ilsr~i--------Dvsk~dviyagaQKnlG-paGltvvIvr~~~-l~r~~~~~~P~if~y~~~~~~~s---- 239 (365)
T COG1932 174 VADASSAILSRPI--------DVSKYDVIYAGAQKNLG-PAGLTVVIVRPDL-LERAESYTLPSIFDYLTHADNGS---- 239 (365)
T ss_pred EEecccHHhcCCC--------ChhHcceEEEehhhccC-ccceEEEEEcHHH-HhcccccCCchHhhchhhhccCC----
Confidence 9998765543332 34458999999999998 6679999998753 3222121 222111110 00000
Q ss_pred CCcccCCCCCCCcHHHHHH---HHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC---CCceEEEEEecCCCCC
Q 010842 358 KDWQVGTGRRFKSLRLWMV---LRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP---RHFALVCFRLNPYPHS 430 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~---l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~f~~~~~~~~ 430 (499)
.-.+. ..+.+++. ++.+ ..-|++.+.++..+.++.|++.+.+.+-+.-... .....|||.+..
T Consensus 240 ----~yNTP--ptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~---- 309 (365)
T COG1932 240 ----MYNTP--PTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD---- 309 (365)
T ss_pred ----ccCCc--HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc----
Confidence 00111 11222222 2222 4567899999999999999999998743332221 234568898864
Q ss_pred CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.++.+.+++.+.++|.+...+.. ..+.+|+++. .....++++.|++-++.+.++
T Consensus 310 -----~~ld~~fv~eae~~gl~~lkGhr--~vgGmRasiy-nA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 310 -----AELDKGFVAEAEAAGLIYLKGHR--SVGGLRASIY-NAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred -----HHHHHHHHHHHHHcCCceecccc--CCCceeeeee-cCCCHHHHHHHHHHHHHHHHh
Confidence 46788899999999977766632 2233999995 678999999999999887664
No 372
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.14 E-value=4.4e-08 Score=100.71 Aligned_cols=304 Identities=11% Similarity=0.017 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHH--
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVC-- 205 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~-- 205 (499)
..+.++.+.|++++.... ...|+++||+|+..|+..||... .+..|+.. ...+.+.....
T Consensus 88 ~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~g 150 (431)
T PRK06209 88 AIELDAAESFLELIDGAD--------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFIG 150 (431)
T ss_pred HHHHHHHHHHHHhCCccc--------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCccccccccccc
Confidence 344455667888773212 24899999999999999998763 12233322 11211111100
Q ss_pred -HH--hCCCCCCe-EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 206 -KL--AGVSPANI-RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 206 -~~--~G~g~~~v-~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.. .|.....+ ..+.+. .-|+++|++.+++. ...+.+|++-......+..+.+++|.++|++||+.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~ 222 (431)
T PRK06209 151 TTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFIL 222 (431)
T ss_pred cCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 00 01100000 011111 22889999988642 22343444433222233334599999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
|+++.|+... ........++ ..|.+++ -|.++..+..|.+..++. +...+... ..+.. ..+.
T Consensus 223 DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~--i~~~~~~~---~~~~~---------~~~~ 284 (431)
T PRK06209 223 DEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE--YMELGGLE---HTDRE---------RVFL 284 (431)
T ss_pred EcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH--HHhhhccc---ccCCC---------Ccee
Confidence 9998665321 1001111244 3687665 688876566777777643 21221000 00000 0000
Q ss_pred cCCCCCC---CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEE-E-cCCCceEEEEEecCCCCCCc
Q 010842 362 VGTGRRF---KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEI-V-VPRHFALVCFRLNPYPHSGS 432 (499)
Q Consensus 362 ~~~sr~~---~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~-~-~~~~~~~v~f~~~~~~~~~~ 432 (499)
...+... .+....++++.+..++ ..++..++.+++++.|++ .+ +.. + .......+.+...... .
T Consensus 285 ~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~---~ 357 (431)
T PRK06209 285 LSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGN---G 357 (431)
T ss_pred eccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCcc---c
Confidence 0111111 2233445555554333 344555555566655543 32 211 1 1111111112111110 0
Q ss_pred chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.........+.+++.++|..+ . .++++ ..+|++||+++++++.++.+++.
T Consensus 358 ~~~~~~~~~~~~~l~~~Gi~~-p--------~l~is---~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 358 QPSQAFRTLFLQETIRRGVLM-P--------SLVVS---YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred CCcHHHHHHHHHHHHHCCccc-c--------ccccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 011234456778888889643 1 13333 45799999999999999888763
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.08 E-value=2.5e-07 Score=92.59 Aligned_cols=320 Identities=11% Similarity=0.068 Sum_probs=172.8
Q ss_pred HHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC-CeEEEc-CCCCchhHHHHHHHhCCC-
Q 010842 136 DWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH-KLVVYG-SDQTHSTFAKVCKLAGVS- 211 (499)
Q Consensus 136 ~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~-~~~i~~-s~~~H~s~~ka~~~~G~g- 211 (499)
+.|+++..- +-+ ..+|++|||+|+-+|+..++...... |.+ +-.++. ....|-+..-++.+.|..
T Consensus 94 ~~L~~~aP~~~l~-------~vFf~~sGSeAvEtAlKma~qY~~~~----G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~ 162 (449)
T COG0161 94 EKLAELAPEGGLD-------HVFFTDSGSEAVETALKMALQYWRAR----GQPQRKKFISRRNGYHGDTLGAMSVGGPVA 162 (449)
T ss_pred HHHHHhCCCCCcc-------EEEEeCCchHHHHHHHHHHHHHHHhc----CCCcceEEEEeccCcCcccchheeccCchh
Confidence 347777751 111 34899999999999999998765443 333 222333 344466655555554421
Q ss_pred ---------CCCeEEeeCCC---C---CCCc----cCHHHHHHHHHHHHHcC-CccEEEEEecCCCc-ccccCC----hh
Q 010842 212 ---------PANIRALPTSV---D---ANFS----LSPQLLRRAVEADVEAG-LVPLFLCATVGTTS-TTAVDN----VE 266 (499)
Q Consensus 212 ---------~~~v~~v~~~~---~---~~~~----~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~-~G~id~----l~ 266 (499)
...+..+|... . +.+. -..++||+.|.+. | ..+.++++--.--. .|.+-| ++
T Consensus 163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~ 239 (449)
T COG0161 163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLK 239 (449)
T ss_pred hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---CcccEEEEEecccccccCCcccCChHHHH
Confidence 11233444332 0 1011 2245566655542 3 33333333322222 555533 79
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC-ccCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD-PEYL 344 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~-~~yl 344 (499)
++.+||++||+.|+.|.+--|+-....-+.....++ .-|.+++. |.+... ...|.++++++ +.+.+... ..-+
T Consensus 240 ~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~--I~~~~~~~~~~~f 314 (449)
T COG0161 240 RVREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDR--IYEAFSDGDAGAF 314 (449)
T ss_pred HHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHH--HHHHHhcccCCee
Confidence 999999999999999998766643322222222333 26777764 766332 23566666654 22333332 1111
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCC--CceEEE
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPR--HFALVC 421 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~--~~~~v~ 421 (499)
....+.....++..+++..+..-.-+.++++..++..+|.+.|++ +++...+.+. ...+..
T Consensus 315 ----------------~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~ 378 (449)
T COG0161 315 ----------------MHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGA 378 (449)
T ss_pred ----------------ccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEE
Confidence 112222334555555555543222234566667888888888886 4433344332 223334
Q ss_pred EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
+.+..+......--.....++.+...++|.+ +.+. |. .+=++.- .-.|++||+++++++.+.+++..++
T Consensus 379 iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~-iRp~---g~-~i~~~PP-liit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 379 IELVADKATKTPFEARVGARVRAAALERGLL-IRPL---GD-VIYLMPP-LIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred EEEecccccccchhhhHHHHHHHHHHHCCeE-Eeec---CC-EEEEcCC-ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 4554432100000134456777888888943 3332 22 3444442 4569999999999999999877654
No 374
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.05 E-value=8.8e-08 Score=90.88 Aligned_cols=329 Identities=15% Similarity=0.147 Sum_probs=184.5
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
..-.|..+...-.|... +.+.||+.... -.-.+-|.|.++..+..-... -.++.+..+..+
T Consensus 71 GDEAYagsrs~~~L~~a----vkdifGfq~~i-------PthQGRgAE~Il~~i~ik~~~--------~~pg~~~~~~sN 131 (471)
T COG3033 71 GDEAYAGSRSYYALADA----VKDIFGFQYTI-------PTHQGRGAENILIPILIKKGE--------QEPGSKMVAFSN 131 (471)
T ss_pred cchhhcccccHHHHHHH----HHHhcCceeee-------eccCCccHHHHHHHHHhhhcc--------ccCCcccccccc
Confidence 34467777777777776 67778885431 011223445555544321100 114445556667
Q ss_pred CchhHHHH-HHHhCCCCCCeEEeeCCCCCC--------CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CC
Q 010842 197 THSTFAKV-CKLAGVSPANIRALPTSVDAN--------FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DN 264 (499)
Q Consensus 197 ~H~s~~ka-~~~~G~g~~~v~~v~~~~~~~--------~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~ 264 (499)
.|+-..++ ....|. .++-+++++..+ +.+|++.|++.|++-.. ...|.++.....++..|.. +.
T Consensus 132 ~~FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n 207 (471)
T COG3033 132 YHFDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMAN 207 (471)
T ss_pred ceecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHh
Confidence 88876555 456666 566665543211 47899999999987543 3457655555555655643 78
Q ss_pred hhHHHHHHHHhCCEEEeecc-ccchhccC----ccchhh------hcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 265 VEPLAEVANEYGIWVHVDAA-YAGSACIC----PEFRHY------LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A-~g~~~~~~----~~~~~~------~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
++++.+||++|+++++.|+| |+-.+.+. +.|++. ..-+..+|-++.|+.|-..++. .|++.++|+..+
T Consensus 208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~f 286 (471)
T COG3033 208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSFF 286 (471)
T ss_pred HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccHH
Confidence 89999999999999999987 33333333 223321 0114469999999999998885 588899998522
Q ss_pred ---HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 334 ---VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 334 ---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
...-... +... +.+ .|+--.||... ++...|+ +++ ..++++.....+||.+.|.+. |+
T Consensus 287 Dvy~~~~~~~---V~~e-----G~~---tYGgl~Grdme--alAvGL~----e~~~~~yl~~Rv~Qv~YL~~~l~~~-GV 348 (471)
T COG3033 287 DVYEECRTLV---VVQE-----GFP---TYGGLAGRDME--ALAVGLR----EGVNFDYLAHRVAQVQYLADGLEEA-GV 348 (471)
T ss_pred HHHHHHHhhe---Eeec-----ccc---ccCcccchhHH--HHHHHHH----HhcCcHHHHHHHHHHHHHHHHHHhc-CC
Confidence 1111111 1110 111 11111122222 2222232 222 245566667778888889887 88
Q ss_pred EEEcCCCceEEEEEec---CCCCCCcchhHHH-HHHHHHHHH-hcCCEEEEeeeE-------CC------EEEEEEeccC
Q 010842 410 EIVVPRHFALVCFRLN---PYPHSGSADTEML-NRKLLDWVN-STGRVYLTHTIV-------GG------LYMLRFAVGA 471 (499)
Q Consensus 410 ~~~~~~~~~~v~f~~~---~~~~~~~~~~~~~-~~~l~~~l~-~~g~~~~~~~~~-------~g------~~~lRi~~~~ 471 (499)
.++.+....-+.+... |.- . .+++ .+.+.-.|. +.|+-.+.-+.+ .+ -..+|+++--
T Consensus 349 pi~~paGGHavfvda~~~lphi---p--~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR 423 (471)
T COG3033 349 PIVQPAGGHAVFVDAGKFLPHI---P--AEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR 423 (471)
T ss_pred eeEecCCCceEEeehhhhcCCC---C--hhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccc
Confidence 8776655544443321 210 0 1111 334444443 334322221111 11 1469999843
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~ 492 (499)
..-|.+++|.++++++++.++
T Consensus 424 rtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 424 RTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred cccchhHHHHHHHHHHHHHhc
Confidence 344899999999999888754
No 375
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.98 E-value=3.7e-09 Score=95.89 Aligned_cols=233 Identities=15% Similarity=0.111 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
...+-.+.....-.+.|+-.-. ..++++-+| ++.-.++...|.+. ++ .+.+|+ ......|-.|.+
T Consensus 55 l~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr-pk------akyiiw-~ridqks~~ksi 120 (432)
T KOG3843|consen 55 LACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR-PK------AKYIIW-LRIDQKSCFKSI 120 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC-Cc------ccEEEE-EecchHHHHHHH
Confidence 3344445555566777764321 123333333 55556666666542 11 244444 566778888888
Q ss_pred HHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEe
Q 010842 206 KLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhv 281 (499)
-..|+ +++.|..-.+ +....|++.+++.|++.. |-+|.+.+.||++-+. |.+++|+.||..|+++.+|
T Consensus 121 ~~agf---epiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leaiaaica~~diphiv 192 (432)
T KOG3843|consen 121 IHAGF---EPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIV 192 (432)
T ss_pred HhcCC---CceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhh
Confidence 88999 8877754322 236779999999888753 2356667766665544 8899999999999999999
Q ss_pred eccccchhccCccchhh---hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 282 DAAYAGSACICPEFRHY---LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~---~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
..|||.-. .+..+. ...+.++|.++-+..|.+.+|.|..++..-+...++ .. ...|.....
T Consensus 193 nnayglqs---ee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~i--ak~ypgras---------- 256 (432)
T KOG3843|consen 193 NNAYGLQS---EECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EI--AKMYPGRAS---------- 256 (432)
T ss_pred ccccccch---HHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HH--HHhCCCccc----------
Confidence 99997642 222222 223567999999999999999887766432222121 11 111211110
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
....+.+..+|..+|..++.+...+..++-.+++..+.+
T Consensus 257 --------a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 257 --------ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred --------cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 012467788888999999999988888877777766654
No 376
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=5.5e-07 Score=86.87 Aligned_cols=311 Identities=14% Similarity=0.084 Sum_probs=186.1
Q ss_pred ccccChhhHHHHHHHHHHHHHH-cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 120 NWLASPASTELEIVVMDWLATM-LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l-~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
.|-.-.+...+-.+ ++++ ||-+...+..+.--++-|.|||-|+-.+..-..... ++..|++|++++
T Consensus 64 ~Yl~i~G~~~f~~~----~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW 130 (396)
T COG1448 64 NYLPIEGLPEFLEA----VQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFF---------PDATVWISDPTW 130 (396)
T ss_pred ccCCcCCcHHHHHH----HHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCc
Confidence 34444455555555 4443 563321111111134778899988877665443321 566799999999
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHh
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEY 275 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~ 275 (499)
.-........|+ ++...|.-...+-.+|.+.+-+.|++..+ .-+++.--++.||||.- +..++|+++.++.
T Consensus 131 ~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~mla~L~~a~~---~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r 204 (396)
T COG1448 131 PNHKAIFEAAGL---EVETYPYYDAETKGLDFDGMLADLKTAPE---GSVVLLHGCCHNPTGIDPTEEQWQELADLIKER 204 (396)
T ss_pred HhHHHHHHhcCC---ceeeeeccccccccccHHHHHHHHHhCCC---CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 888888888999 99988875433446899998888876432 22345555678999986 5568899999999
Q ss_pred CCEEEeeccccchhccCccch----hhhcCCCCCceeEecccccccCC---CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFR----HYLNGIERVDSFSFSPHKWLLSY---LDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~----~~~~g~~~aDsi~~~~hK~l~~p---~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
|+.-.+|-||-|+.--.++-. ...... .-=.++.|..|.++.- .|+-.++..+.+...+.++.-..-++...
T Consensus 205 ~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~y 283 (396)
T COG1448 205 GLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNY 283 (396)
T ss_pred CCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999988754333211 111111 1246788889988642 22333444555544444443222222211
Q ss_pred CCCCCcccCCCcccCCCCCC-CcHHHHH------HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcCCCce
Q 010842 349 SESNSVVDFKDWQVGTGRRF-KSLRLWM------VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVPRHFA 418 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~-~al~~~~------~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~~~~ 418 (499)
|.+. ...++.. .|+..=...+..+.+|..++++.|.+.|++. + +|..+ ..+.+
T Consensus 284 ----------------SnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~G 346 (396)
T COG1448 284 ----------------SNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRG 346 (396)
T ss_pred ----------------CCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCc
Confidence 0010 1111111 2333334556778888999999999999872 2 35554 23445
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+++| .+. +.+-+.+|.++.-+|+... | |+++. ..++..|+.+.++|.++
T Consensus 347 MFsy--~Gl-----------s~~QV~rLree~~IY~v~s---G----Ri~va--Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 347 MFSY--TGL-----------SPEQVDRLREEFGIYLVAS---G----RINVA--GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeec--CCC-----------CHHHHHHHHHhccEEEecC---C----eeeec--cCChhhHHHHHHHHHhh
Confidence 5544 332 2233455555444554332 2 88884 36788999999998875
No 377
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.92 E-value=3.5e-07 Score=85.03 Aligned_cols=323 Identities=15% Similarity=0.136 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC----CCCchhHHHHHH
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS----DQTHSTFAKVCK 206 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s----~~~H~s~~ka~~ 206 (499)
..-++..++.+.|..+.. +....+-.+|+..++...-+-.+ ++..|+.- ...||+++..++
T Consensus 113 De~il~l~~~iVGA~e~E--------vavmNsLTvNlh~Ll~sFyKPTe-------kR~KILlE~kaFPSDhYAiesQ~~ 177 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQENE--------VAVMNSLTVNLHSLLISFYKPTE-------KRFKILLEKKAFPSDHYAIESQCK 177 (465)
T ss_pred chhhhhhhhhhccCCchh--------hhhHhhhhhHHHHHHHHhcCCcc-------hhhhhhhccCCCCchHHHHHhhhh
Confidence 334566788899987653 32223334566665543221000 12223322 236899999999
Q ss_pred HhCCCCC-CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 207 LAGVSPA-NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 207 ~~G~g~~-~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+-|+... ..+.+...+ |.-.+..+++-..|++ +|....+|+.+.....||..-++.+|...-+..|+.+-.|=||
T Consensus 178 lhG~~~e~sm~~iePRE-GEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 178 LHGISPENSMIQIEPRE-GEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred hcCCChHHheEEecccc-cccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence 9999543 345555443 4457888888888765 4666778888888899999999999997777789999999888
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC-----CC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF-----KD 359 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~-----~~ 359 (499)
+.+-... +-+. . ++|+.+|...|++++ +.|.|.+++.++.. ......-.+|+.........+.+. +.
T Consensus 254 AvgNVpL--~LHd-W---gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846|consen 254 AVGNVPL--QLHD-W---GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred hhcCCce--EEee-c---CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence 7653322 1111 1 399999999999965 46678888876532 222233344444332211111111 11
Q ss_pred cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----------EEEcCC----CceEEEE
Q 010842 360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-----------EIVVPR----HFALVCF 422 (499)
Q Consensus 360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-----------~~~~~~----~~~~v~f 422 (499)
.++..|.+. ...++..+|..+.+-.+.+...+..-++.|+...++...+. .++.|. +...++.
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl 406 (465)
T KOG3846|consen 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSL 406 (465)
T ss_pred cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEE
Confidence 111122222 23456666777766668888888888888888877764332 233221 2333444
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+..+ +..+...|.++|.+.- -+..+.+|++....+++-.||..++++|.++...+.
T Consensus 407 ~Fssp-----------~~~vfqeL~krGv~~D----kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 407 YFSSP-----------TPKVFQELHKRGVIGD----KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred EeCCC-----------chHHHHHHHHcCeecc----ccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 44332 3567777888884321 123467999998889999999999999999887654
No 378
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.90 E-value=7e-07 Score=85.94 Aligned_cols=286 Identities=13% Similarity=0.028 Sum_probs=161.1
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHHHHhCCCCCCeEEeeCCC------------
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVCKLAGVSPANIRALPTSV------------ 222 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~------------ 222 (499)
.+|++||||||-+||++||... ....|+ ....-|-....++.+.|++ .++-+.+.
T Consensus 112 vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~~---~~k~~~~~~~~~~~~~~~Pd 179 (442)
T KOG1404|consen 112 VFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGLS---PWKQNFPGVASGVHHTMNPD 179 (442)
T ss_pred EEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccCC---cccccCCCCCCcccccCCCC
Confidence 4899999999999999999764 222344 3444576666666666662 22221110
Q ss_pred --CCCCccC-----HH----HHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccc
Q 010842 223 --DANFSLS-----PQ----LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 223 --~~~~~~d-----~~----~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.+-|.=+ .+ +|+..|..+... .+.+.++-......|.+.+ +++..++|+++|..++.|.++.|
T Consensus 180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~--~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG 257 (442)
T KOG1404|consen 180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPE--TVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG 257 (442)
T ss_pred cccccCCCCchhhhHHHHHHHHHHHHHhcCCC--ceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence 0111111 23 333444333322 2333444333344588755 78999999999999999999988
Q ss_pred hhccCccchhhhcCCCC----CceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 288 SACICPEFRHYLNGIER----VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~----aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+.... .+.|++. -|.+|+ -|.++.....|.+++..+ +...+.....|.+.-
T Consensus 258 fGRtG-----~~wgfe~h~v~PDIvTm--AKgiGnG~Pl~AVvtt~E--Ia~v~~~~~~~fnTy---------------- 312 (442)
T KOG1404|consen 258 FGRTG-----HMWGFESHGVVPDIVTM--AKGIGNGFPLGAVVTTPE--IADVLNQKSSHFNTY---------------- 312 (442)
T ss_pred ccccc-----ccccccccCCCccHHHH--HhhccCCCcceeeecCHH--HHHHHHhcccccccc----------------
Confidence 75432 1223222 344443 588877677888887664 224444433232221
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCC--ceEEEEEecCCCCCCcchhHHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRH--FALVCFRLNPYPHSGSADTEMLNR 440 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~ 440 (499)
.+.+..+....+.|+.+-+ +++.++..+...||.+.|.++. ..+++.+.+ .-++-..+..+......-......
T Consensus 313 ggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~ 389 (442)
T KOG1404|consen 313 GGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGA 389 (442)
T ss_pred CCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHH
Confidence 2223223333344444433 4566777888999999988753 355555432 112223332211000000133455
Q ss_pred HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
.+-+.+.+.|..+ .-..+.|. ++|++.- .-.|++||+.+++..
T Consensus 390 ~i~~~cke~Gvlv-g~g~i~G~-vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 390 VIGEQCKELGVLV-GKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHhCeee-ecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence 6677777788544 55555665 7999873 557999997777755
No 379
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=6.1e-06 Score=80.15 Aligned_cols=301 Identities=12% Similarity=0.011 Sum_probs=163.6
Q ss_pred cEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC---C-CC-Ccc
Q 010842 155 GGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV---D-AN-FSL 228 (499)
Q Consensus 155 ~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---~-~~-~~~ 228 (499)
-..|+++||+||..||..||.....+. ...+ .+|..-...|--..-++...+. .-+.+|.++ + .. ---
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~---~~~~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~yn 191 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKH---PEKKTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYN 191 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccC---CccceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccC
Confidence 358999999999999999997654321 1112 2444455556555445444333 222222211 0 00 023
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER 304 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~ 304 (499)
|+.+|++.++..+. .+.+|++--..-.-|.+ +| +..|..+|+++|+.++.|..+-|+....+.+.+...++ .
T Consensus 192 d~t~l~k~~~~h~~---~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~ 267 (433)
T KOG1401|consen 192 DSTALEKLFESHKG---EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-T 267 (433)
T ss_pred CHHHHHHHHHhCCC---ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-C
Confidence 79999999987542 13455555555555555 44 68899999999999999999988666555555444443 3
Q ss_pred CceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhc
Q 010842 305 VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYG 381 (499)
Q Consensus 305 aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g 381 (499)
-|.+|+ -|.|+.....|...++++- ...++..-+ +.+. .+-...++.. ..+|..+.
T Consensus 268 PDI~t~--aK~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg----------------~Tf~gnpLacsa~~~~l~~l~ 326 (433)
T KOG1401|consen 268 PDITTV--AKPLGGGLPIGATGVRDKV--AEMISPGDH-LYHG----------------GTFSGNPLACSAGIKVLDELK 326 (433)
T ss_pred Ccceee--hhhccCCceeEEEeehHHH--HhhcCCCCc-cccC----------------cccCCChhhhhHHHHHHHHHc
Confidence 677776 4888766778999998853 233433322 2111 1111233433 33444444
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842 382 -VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG 460 (499)
Q Consensus 382 -~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 460 (499)
.+.++..-.....+++.+.+.+.+.+.-..-.--+..++-|.+..+. . ....+.+-...+...+.. .....
T Consensus 327 ~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~-~----~~~d~~~~~~ll~~~~~~---~~~~~ 398 (433)
T KOG1401|consen 327 DPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV-Y----KFADAAREQGLLILTLGK---GLLEE 398 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech-h----hhhhhhhhhhHHHHHHhc---ccccc
Confidence 34556666666778888888887765432221111122223222110 0 000111111122221110 00112
Q ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
+..+.++.+++-.+|.|.++++++++.+...++-
T Consensus 399 gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 399 GVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred eEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 2233332233344568999999999998877653
No 380
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.85 E-value=1.1e-05 Score=88.18 Aligned_cols=231 Identities=15% Similarity=0.116 Sum_probs=123.3
Q ss_pred HHHHHHHHHHH--HcCCccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC
Q 010842 231 QLLRRAVEADV--EAGLVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE 303 (499)
Q Consensus 231 ~~L~~~i~~~~--~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~ 303 (499)
+.+++.|++.. ..+..+.+|++--. ...-|.+-| ++++.++|++||+.|+.|.++.|+......+.....|+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~ 646 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK 646 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence 45666664321 11233444444432 233466532 799999999999999999999887544333333333443
Q ss_pred CCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc--cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHH
Q 010842 304 RVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP--EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVL 377 (499)
Q Consensus 304 ~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l 377 (499)
.|.+++. |.+...+ ..|.++++++ +.+.|.... ..+.. ..+....++... ++|
T Consensus 647 -PDIi~~g--KgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~h----------------g~Ty~gnpl~cAaala~L 705 (817)
T PLN02974 647 -PDIACYA--KLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLH----------------GHSYTAHPMGCAAAAKAL 705 (817)
T ss_pred -CCEEeec--ccccCCCCccEEEEEcHH--HHHhhccccccCCccc----------------CCCCCcCHHHHHHHHHHH
Confidence 7888874 8876653 6788887764 223332110 00101 112222334444 445
Q ss_pred HHhcHH-HHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCC
Q 010842 378 RSYGVL-NLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGR 451 (499)
Q Consensus 378 ~~~g~~-g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~ 451 (499)
+.+-.+ -++...++..++..++.+.| ++.|.+.=+. ....++.+.+..... ++........++.+++. ++|.
T Consensus 706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~-~~~~~~~~a~~v~~~~~~~~Gl 783 (817)
T PLN02974 706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGS-GSGYSSLYARSVVRRLRREDGI 783 (817)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCc-ccccchHHHHHHHHHHHHhCCE
Confidence 444332 22344455555555555444 4444432221 122344444443210 00001234567777787 7885
Q ss_pred EEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 452 VYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 452 ~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+. .+ . | .++|+.. .+.++++++++++++|.+..
T Consensus 784 ~~-r~--~-G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 784 YA-RP--L-G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EE-Ee--c-C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 43 22 2 2 4688776 48899999999999998753
No 381
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=2.3e-07 Score=84.32 Aligned_cols=253 Identities=11% Similarity=0.025 Sum_probs=145.8
Q ss_pred eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHH
Q 010842 189 LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL 268 (499)
Q Consensus 189 ~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I 268 (499)
..|+...+++.-+.-.+.+.++ +|+.||.++ +|.+++|++.+.++.+.+ |.++.+|.+.|++|.+--.+.|
T Consensus 112 eKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di 182 (375)
T KOG0633|consen 112 EKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDI 182 (375)
T ss_pred cceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHH
Confidence 4566555565544455677888 999999987 589999999999887643 6689999999999999776777
Q ss_pred HHHHHHh-CCEEEeeccccchhccCccchhhhcCCCCCce-eEecccccccC-CCcceEEEEeCchhHHHh-hcCCccCC
Q 010842 269 AEVANEY-GIWVHVDAAYAGSACICPEFRHYLNGIERVDS-FSFSPHKWLLS-YLDCCCLWVKQPGLLVKA-LSTDPEYL 344 (499)
Q Consensus 269 ~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDs-i~~~~hK~l~~-p~~~g~l~~r~~~~l~~~-~~~~~~yl 344 (499)
-++.+-- |..++||.||--+.... ....+.... -.. +.-...|.++. ..-.|+-++.- .+.+. .+..++|-
T Consensus 183 ~KiLe~p~nglVVvDEAYidFsg~~-S~~~lV~kY--pNLivlqTlSKsfGLAGiRvG~~~~~~--~ia~iln~~KaPYN 257 (375)
T KOG0633|consen 183 LKILEMPDNGLVVVDEAYIDFSGVE-SRMKLVKKY--PNLIVLQTLSKSFGLAGIRVGYGAFPL--SIAEILNRAKAPYN 257 (375)
T ss_pred HHHHhCCCCcEEEEeeeeEeecccc-ccchHhHhC--CceeehhhhhhhcCcceeEeecccccH--HHHHHHHhccCCcc
Confidence 6666543 68899999985543211 101111111 111 11223344332 22233333221 12121 23344443
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEE
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALV 420 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v 420 (499)
... ..--++|.++. .+.++...+...+-+.+|...|.++|.+. .+.+...+.+
T Consensus 258 iS~-----------------------~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFi 314 (375)
T KOG0633|consen 258 ISV-----------------------AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFI 314 (375)
T ss_pred ccc-----------------------hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEE
Confidence 221 11123333332 23344444555566677888888888765 3345566777
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
..++.+.+ +...+.+..++. +.|.++-- ++...=++++|++++ |+|+-+-+++.++++
T Consensus 315 Li~v~~~~-------n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 315 LIEVTGGD-------NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF 374 (375)
T ss_pred EEEEcCCC-------cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence 77775432 455666666554 44543322 223334689999997 556667777777654
No 382
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.80 E-value=2.7e-07 Score=90.31 Aligned_cols=151 Identities=21% Similarity=0.167 Sum_probs=101.1
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~ 235 (499)
+++++..+.|.+..+.+.-... +..++... .+. ..|+++...+++.|. .++.|... + +....+++.
T Consensus 86 ~~ivnnn~aAVll~~~al~~~~-----EvVis~g~-lV~-gg~~~v~d~~~~aG~---~l~EvG~t--n--~t~~~d~~~ 151 (395)
T COG1921 86 AAIVNNNAAAVLLTLNALAEGK-----EVVVSRGE-LVE-GGAFRVPDIIRLAGA---KLVEVGTT--N--RTHLKDYEL 151 (395)
T ss_pred eeeECCcHHHHHHHHhhhccCC-----eEEEEccc-ccc-CCCCChhHHHHHcCC---EEEEeccc--C--cCCHHHHHH
Confidence 5888887777766555442210 00001111 233 589999999999999 88777653 3 789999999
Q ss_pred HHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc
Q 010842 236 AVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH 313 (499)
Q Consensus 236 ~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h 313 (499)
+|.++++ ++.-++.++. |.. -++++++++||++|++++||.+-|...-.-+..+..+. .++|.+++|++
T Consensus 152 AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV~~Sgd 222 (395)
T COG1921 152 AINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLVSFSGD 222 (395)
T ss_pred HhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEEEEecc
Confidence 9999886 4555554432 433 36778999999999999999876553221122222221 24999999999
Q ss_pred ccccCCCcceEEEEeCc
Q 010842 314 KWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 314 K~l~~p~~~g~l~~r~~ 330 (499)
|.|++|. +|++.-|..
T Consensus 223 KllgGPq-aGii~GkKe 238 (395)
T COG1921 223 KLLGGPQ-AGIIVGKKE 238 (395)
T ss_pred hhcCCCc-cceEechHH
Confidence 9999995 777776653
No 383
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.78 E-value=9.4e-07 Score=89.69 Aligned_cols=367 Identities=14% Similarity=0.094 Sum_probs=208.6
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCC-hHHHHHHHHHH-----HcccCCcccccC
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVS-TAGFLGEMLCA-----CFNSVGFNWLAS 124 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~l~~-----~~n~~~~~~~~~ 124 (499)
|..++...+..+| .|..+.++++++.+...++.. |. .|.|.-.-+.. ++.++..++.. -+.+++...+++
T Consensus 85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk~-~k--sfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQG 160 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNKI-WK--SFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQG 160 (1001)
T ss_pred chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhhH-HH--HhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhh
Confidence 4455555555564 678899999999987766652 33 35442222333 34444444432 123344444555
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
..-..+-.+.+ ++++.|+|-+ +..+..-||.|.-.-.++.|.. ++-.++++...|+.....
T Consensus 161 RLEsllNyQTm--i~dlTGL~~a-------NASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV 221 (1001)
T KOG2040|consen 161 RLESLLNYQTM--ITDLTGLPMA-------NASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSV 221 (1001)
T ss_pred hHHHHhhhHHh--hhhccCCccc-------chhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhh
Confidence 55555666644 8999999865 3355555564432222223322 223378888999876555
Q ss_pred HHH--hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 205 CKL--AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 205 ~~~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
++. -|+|. .+..++ +.+...- ......|++..|.| .|.+.|.+++++.+++.|..+++-
T Consensus 222 ~~TRa~~~~i-~v~~~~----------~~~~~~s-------~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~a 282 (1001)
T KOG2040|consen 222 VKTRAKGFGI-KVVVSD----------IKEADYS-------SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMA 282 (1001)
T ss_pred hhccccccce-eEEecC----------HHHhhcc-------ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEe
Confidence 432 23311 322222 2211111 11234688888887 699999999999999999876553
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
.-.-...++-|. |-=+||....+.+.++ +|.| .|++.+++. .....|+.+.+...+..+...+
T Consensus 283 tDLLaLtiLrpP------gefGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~-----l~R~mPGRiiGvtkD~~gk~a~ 350 (1001)
T KOG2040|consen 283 TDLLALTILRPP------GEFGADIAVGSSQRFG-VPLGYGGPHAAFFAVSES-----LVRMMPGRIIGVTKDALGKEAY 350 (1001)
T ss_pred ehhhHHHccCCh------hhcCceeeeccccccC-ccccCCCchHHHHHHHHH-----HHhhCCCceEeeeecccccHHH
Confidence 222111111111 1114999999998865 4544 455555432 2234455554443322222111
Q ss_pred C---CcccCCCCCC-------CcHHHHHHHH-----HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842 358 K---DWQVGTGRRF-------KSLRLWMVLR-----SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF 422 (499)
Q Consensus 358 ~---~~~~~~sr~~-------~al~~~~~l~-----~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 422 (499)
+ +-.-|..||- .|.++.+.+. +.|.+|++++.++....+..|...|+.. +-++...+.+-.+.+
T Consensus 351 RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI 429 (1001)
T KOG2040|consen 351 RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKI 429 (1001)
T ss_pred HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEE
Confidence 1 0001112221 2333333332 2499999999999999999999999986 678887887777777
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
++... .+++.++..++++-+- .+ ..+.+-+++ -..++++|+|.++..+.+
T Consensus 430 ~~~~s-----------~~~~l~rA~~~~iNlr---~~-ed~tigvsl-DETv~~~DvddLl~vf~~ 479 (1001)
T KOG2040|consen 430 RCGCS-----------AEEVLDRAAKRQINLR---LV-EDGTIGVSL-DETVTEKDVDDLLWVFNE 479 (1001)
T ss_pred EecCc-----------HHHHHHHHHhhcCceE---Ee-ecCceEEee-cccccHHHHHHHHHHHcc
Confidence 77542 3455555555553221 11 123366677 488999999999998853
No 384
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.77 E-value=4e-06 Score=81.19 Aligned_cols=303 Identities=13% Similarity=0.104 Sum_probs=158.3
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh----hhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG----AENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~----~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
++.+++++|.+.+. ++..|-|.=|++--..++.....-.+ +...++...+|+.+.+-.....++.+|+
T Consensus 75 r~l~a~llgv~~~~--------viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gi 146 (425)
T PF12897_consen 75 RELFAELLGVPPEN--------VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGI 146 (425)
T ss_dssp HHHHHHHHTS-GGG--------EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-
T ss_pred HHHHHHHhCCCHHH--------EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCc
Confidence 44599999998764 55554444344433333332222111 1123577899999999999999999999
Q ss_pred CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH-HHHhCCEEEeecccc
Q 010842 211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV-ANEYGIWVHVDAAYA 286 (499)
Q Consensus 211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i-a~~~~~~lhvD~A~g 286 (499)
+.+.||.+++| .|+|.+|+.+.++..- --+-++---+||+|..-. +++++.+ +.+.++.+.-|-||+
T Consensus 147 ---emi~VpM~~dG---PDmD~Ve~LV~~D~sv---KGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 147 ---EMIPVPMTEDG---PDMDMVEELVAEDPSV---KGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp ---EEEEEEEETTE---E-HHHHHHHTHTSTTE---EEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred ---EEEecCCCCCC---CCHHHHHHHHhcCCcc---ceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 99999999875 8999999999765431 113444455789999944 4555554 346799999999998
Q ss_pred chhccCc--cch--hhh-----cCCCCCceeEecccccccCCCcceEEEEeCch--hHHHhhcCCccCCCCCCCCCCCcc
Q 010842 287 GSACICP--EFR--HYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG--LLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 287 ~~~~~~~--~~~--~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~--~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
...+..+ ... ..+ .|-..--.+-.|..|.-+...|.+++...... .+.+.++.. -+
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~--tI----------- 284 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ--TI----------- 284 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---S-----------
T ss_pred EeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc--ee-----------
Confidence 8766322 111 111 23222335566788887766666766654432 111111110 00
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhc-HH-HHHHHHHHHHHH--------HHHHHHHHh-cCCCeEEEcCCC-ceEEEEE
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYG-VL-NLQSHIRSDIRL--------AKMFEGFVK-SDPRFEIVVPRH-FALVCFR 423 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g-~~-g~~~~~~~~~~~--------a~~l~~~L~-~~~~~~~~~~~~-~~~v~f~ 423 (499)
..+-+......+.++ .+ |+++.++++.+. -+.|.+.|. .. ++--+..|. ...|+|.
T Consensus 285 -----------gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld 352 (425)
T PF12897_consen 285 -----------GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLD 352 (425)
T ss_dssp --------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEE
T ss_pred -----------CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEe
Confidence 112244444555553 35 777777666653 344555665 32 444455554 4567777
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeE--C---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIV--G---GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~--~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+.. .+++.+...+.|+.+.. +..+ + ....||++.+ +-+.+|++..++.+.-+++
T Consensus 353 ~~~G~----------AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS--~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 353 VLDGT----------AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS--YPSLEELETAMDVFATCVK 414 (425)
T ss_dssp ESTT-----------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S--SS-HHHHHHHHHHHHHHHH
T ss_pred cCCCh----------HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC--CCCHHHHHHHHHHHHHHHH
Confidence 65532 67888888888965443 2222 1 1356999985 3578999999998876554
No 385
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.77 E-value=4.4e-06 Score=78.65 Aligned_cols=297 Identities=15% Similarity=0.192 Sum_probs=161.7
Q ss_pred HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC--CeEE-EcCCCCchhHHHH-------
Q 010842 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH--KLVV-YGSDQTHSTFAKV------- 204 (499)
Q Consensus 135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~--~~~i-~~s~~~H~s~~ka------- 204 (499)
.+.+.++||++.- +-+++|.||+-+|+..||.+.... ++++ +..| .+-..-|-...-+
T Consensus 107 ~~~vt~lf~~~kv---------lpmnTGaEa~Eta~KLaR~wgy~~---K~ip~nka~il~~~~nFhGrT~~ais~s~d~ 174 (427)
T KOG1402|consen 107 AEYVTKLFGYDKV---------LPMNTGAEAVETACKLARKWGYRK---KNIPKNKAKILSAENNFHGRTLGAISLSTDP 174 (427)
T ss_pred HHHHHHhcCccee---------eecccchhHHHHHHHHHHHHHHhh---ccCCccceeEEEecccccCceeeeEEecCCc
Confidence 3458999999764 557788999999999999764432 1333 1122 2222223211111
Q ss_pred HHHhCCCCC---CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHHHHHHhCC
Q 010842 205 CKLAGVSPA---NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAEVANEYGI 277 (499)
Q Consensus 205 ~~~~G~g~~---~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~ia~~~~~ 277 (499)
-...|.|.- .+..||.+ |.++|+.++++.. ..-|+|=-..| .-|.+ +| |++..++|.+|++
T Consensus 175 ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~---vaaFivEPIQG--EaGVvvP~~GYL~~vreLCtkynv 242 (427)
T KOG1402|consen 175 DSWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN---VAAFIVEPIQG--EAGVVVPPPGYLKKVRELCTKYNV 242 (427)
T ss_pred chhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC---eeEEEeecccc--ccceEeCCchhHHHHHHHHHhhcE
Confidence 112334321 24555543 7899999987621 12233333333 45766 33 8999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
.++.|..+.|......-+..-...+ +-|.+.+ -|.+.+ -+..+.++..+.-.+ ...|.-
T Consensus 243 l~I~DEvQTGl~RTGk~la~d~env-~PDivil--gKalSGG~~Pvsavl~~~~im~----~~~pge------------- 302 (427)
T KOG1402|consen 243 LLIADEVQTGLARTGKLLACDYENV-RPDIVIL--GKALSGGVYPVSAVLADDDIML----NIKPGE------------- 302 (427)
T ss_pred EEEehhhhhcccccCcEEEeehhhc-CCCeEEE--eccccCCeeeeEEEEecHHHHh----ccCCCc-------------
Confidence 9999999877543211110000111 2566655 355532 355666665443221 111110
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-e-EEEc--CCCceEEEEEecCCCCCCc
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-F-EIVV--PRHFALVCFRLNPYPHSGS 432 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~-~~~~--~~~~~~v~f~~~~~~~~~~ 432 (499)
+ ..+.....|..-.++..+..---+++.+++..+-..|+.+|.+++. + .++. .-..-+..+.+.+...
T Consensus 303 ---H--gsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~--- 374 (427)
T KOG1402|consen 303 ---H--GSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT--- 374 (427)
T ss_pred ---c--ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc---
Confidence 0 0111123455555555554444467788889999999999988653 2 0111 1122223333333210
Q ss_pred chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.....-.++-.+.+.|. +.-+.. + ..+|++.- ...+++|+++-+++|.+..
T Consensus 375 --~~~~aw~~cl~lk~~g~--LAkptH-~-~IiRfaPP-L~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 375 --SGQDAWDVCLALKENGL--LAKPTH-G-NIIRFAPP-LVISEEDLREGIEAIEKTI 425 (427)
T ss_pred --cchhHHHHHHccccccc--ccCCCC-C-CeEEecCC-cccCHHHHHHHHHHHHHHh
Confidence 11223345556666773 322222 2 37999883 6679999999999998864
No 386
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.74 E-value=4.3e-06 Score=83.25 Aligned_cols=189 Identities=15% Similarity=0.059 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
+....++.++|.++++-... ...+++|||+|+-.|+..||...... ...+ +..++-.....|-...-+..+
T Consensus 58 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~Alkla~~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~ 128 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGLD-------RVFFANSGSEAVEAALKLARQYHNKR-AYTG-RRKILAFEGSYHGRTLGALSL 128 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-HHHT-TTEEEEETTTB-TSSHHHHHH
T ss_pred ccchhhhhhhhhhccccccc-------eeeeccCchHHHHHHHHHhhcccccc-cccC-CceEEEeeeeeeccCcccccc
Confidence 44455566778888833222 35899999999999999999221110 0001 233333344456544434333
Q ss_pred hC---------CCCCCeEEeeCCCCCC---CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHH
Q 010842 208 AG---------VSPANIRALPTSVDAN---FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEV 271 (499)
Q Consensus 208 ~G---------~g~~~v~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~i 271 (499)
.+ -....+..+|.+.... ..-..+++++.+.+... ....+|++--.....|.+ +=+++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~l 206 (339)
T PF00202_consen 129 TGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELREL 206 (339)
T ss_dssp SSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHH
T ss_pred cCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehccc
Confidence 22 1112567777652110 00112224444443322 234455555555555655 227999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
|++||+.+++|..+.|+.....-+.....++. .|.+++. |.++..+..|.++++++
T Consensus 207 c~~~gillI~DEV~tG~gRtG~~~a~~~~gv~-PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 207 CREHGILLIADEVQTGFGRTGKFFASEHYGVD-PDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHTT-EEEEEETTTTTTTTSSSSGHHHHTSS-SSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccccceecccccccccccCCccceeccccc-Ccccccc--cchhhhhhcccccccch
Confidence 99999999999999887544333333334553 7999996 99877788999998874
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.50 E-value=1.3e-07 Score=91.87 Aligned_cols=161 Identities=17% Similarity=0.142 Sum_probs=38.1
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC------chhHHHHHHH
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT------HSTFAKVCKL 207 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~------H~s~~ka~~~ 207 (499)
+.+.+++++|.... +++++...|++.++.+... +-.|++|... .+.+...++.
T Consensus 52 v~~ll~~ltgAeaA---------~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~~ 110 (367)
T PF03841_consen 52 VEELLCELTGAEAA---------LVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMRQ 110 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---------ccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence 44558888988765 7777766777766654321 1134445433 3346667777
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cccc--CChhHHHHHHHHhCCEEEeec
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TTAV--DNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G~i--d~l~~I~~ia~~~~~~lhvD~ 283 (499)
.|. .++.|-+. + +..+++.+++|.++|+ ++.-.+.+|. .|.. -+++++++++|+|++++++|.
T Consensus 111 sGa---~lvEVGtt--N--~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dl 177 (367)
T PF03841_consen 111 SGA---RLVEVGTT--N--RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDL 177 (367)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHT--EEEE-
T ss_pred ccc---cccccccc--c--cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEEC
Confidence 888 88888764 2 6789999999999987 5666665554 2222 479999999999999999997
Q ss_pred cccchhccCccc----hhhhc-CC-CCCceeEecccccccCCCcceEEEEeCc
Q 010842 284 AYAGSACICPEF----RHYLN-GI-ERVDSFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 284 A~g~~~~~~~~~----~~~~~-g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
+-|...-+ ..+ .+.+. -+ .++|.++||+.|.+++|- +|+++-|..
T Consensus 178 gsG~l~dl-~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~ 228 (367)
T PF03841_consen 178 GSGLLVDL-SPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKE 228 (367)
T ss_dssp TTHHHHHH-HTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred CCCCCcCc-ccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence 65443211 111 11111 11 359999999999999985 788887764
No 388
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.25 E-value=0.00023 Score=66.01 Aligned_cols=343 Identities=13% Similarity=0.034 Sum_probs=185.7
Q ss_pred cCCCCCCh-HHHHHHHHHHHcccCCcccc------cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 95 FFPATVST-AGFLGEMLCACFNSVGFNWL------ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 95 ~~~~~~~~-~~~~~~~l~~~~n~~~~~~~------~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
|-+++... .+++-++-...+|-++...+ .+.-...+-......+.+|+..|+++. --++.+|||.- +
T Consensus 11 FaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~-----vlf~QGGGt~q-F 84 (370)
T KOG2790|consen 11 FAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYK-----VLFLQGGGTGQ-F 84 (370)
T ss_pred cCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCcee-----EEEEeCCCccc-c
Confidence 33444333 35566666677765543322 133455666667888999999998851 23456677732 2
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCC-ccCHHHHHHHHHHHHHcCCc
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANF-SLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~ 246 (499)
.|+..-.-. .++|..-.-|++..=+-.+.++|-++.-. +.+..+..+...+ -.|.+.++-..+ .
T Consensus 85 aAv~lNL~g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~d--a----- 149 (370)
T KOG2790|consen 85 AAVPLNLIG-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNPD--A----- 149 (370)
T ss_pred cccchhhhc-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCCC--c-----
Confidence 222111000 01122223455543333445555544333 3444333211100 134444433211 1
Q ss_pred cEEEEEecCCCcccccCC-hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842 247 PLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL 325 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 325 (499)
-+|..+...|..|.--| +. +-.-+|..++.|-.- -++ .+--++...+.|...++|..+ |.|..++
T Consensus 150 -~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSS---nfl-----SrpvDvsk~gvi~aGAQKN~G-~aG~Tvv 215 (370)
T KOG2790|consen 150 -SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSS---NFL-----SRPVDVSKFGVIFAGAQKNVG-PAGVTVV 215 (370)
T ss_pred -cEEEEecCceeeceecCCCC----CCCCCCceEEEeccc---chh-----cCCccchhcceEEeccccccC-ccccEEE
Confidence 27888888899998633 33 223467888888432 111 112234457789999999987 6788888
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFV 403 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L 403 (499)
++|+.- +.+.....|.-+.-.... .+.++-.+.+ |..-..-+.++.+ ...|++++-+...+.++.+++.|
T Consensus 216 ivr~dl-lg~~~~~tP~v~dyk~~~-------~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~i 287 (370)
T KOG2790|consen 216 IVRKDL-LGNALDITPSVLDYKIMD-------KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAI 287 (370)
T ss_pred EEehhh-hcccccCCccccceeeec-------cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 888742 333333333322211100 0111111211 1111122233332 23567777778889999999999
Q ss_pred hcCCCeEEE-cCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHH
Q 010842 404 KSDPRFEIV-VPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHV 479 (499)
Q Consensus 404 ~~~~~~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di 479 (499)
.+..||-.. .+| .-..|+||+.+ +++-.++++...+++.+-+.+ .+..+.+|.|+- -..+-+++
T Consensus 288 D~s~gfy~cpVe~~~RS~MNV~Fri~~---------d~Le~eFLkeA~~~~mv~LKG--hRSVGGiRASlY-NAisv~~~ 355 (370)
T KOG2790|consen 288 DNSNGFYRCPVEPSVRSRMNVPFRIEK---------DELEAEFLKEAAKEHMVQLKG--HRSVGGIRASLY-NAISVEEV 355 (370)
T ss_pred HhcCCeEEcccchhhhhhcccceeecc---------hHHHHHHHHHHHHhhhhcccc--ccccccchhhhh-ccccHHHH
Confidence 998787544 233 23458899975 345566666666666332222 234456999985 45789999
Q ss_pred HHHHHHHHHHHHH
Q 010842 480 VAAWELIMEGADR 492 (499)
Q Consensus 480 ~~l~~~l~~~~~~ 492 (499)
+.+++-++++.+.
T Consensus 356 q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 356 QKLAAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 389
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.19 E-value=0.00028 Score=68.28 Aligned_cols=169 Identities=13% Similarity=0.164 Sum_probs=98.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTF 201 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~ 201 (499)
+-..+|+. +++.||.+.. ++ ..+||.|+-++|..... |++.++ ++...+-.+
T Consensus 55 GRd~le~i----yA~vfgaE~A---------LVRpq~vSGTHAi~~~Lfg~Lr-----------pGD~ll~~tG~PYDTL 110 (403)
T PF06838_consen 55 GRDKLERI----YADVFGAEDA---------LVRPQFVSGTHAIALALFGVLR-----------PGDELLSITGKPYDTL 110 (403)
T ss_dssp HHHHHHHH----HHHHCT-SEE---------EEETTS-SHHHHHHHHHHHH-------------TT-EEEESSSS--CCH
T ss_pred cHHHHHHH----HHHHhCchhh---------hhcccccchHHHHHHHHHhcCC-----------CCCeEEEcCCCchhhH
Confidence 34556665 8999998764 22 34789998888877654 555544 565667778
Q ss_pred HHHHHHhCCCCC-------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec--CC--CcccccCChhHHHH
Q 010842 202 AKVCKLAGVSPA-------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV--GT--TSTTAVDNVEPLAE 270 (499)
Q Consensus 202 ~ka~~~~G~g~~-------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~--gt--t~~G~id~l~~I~~ 270 (499)
.+.+.+-|-+.. +...||..++| .+|.+.++++|+++++ +|...- |. -+.=.+++|+++.+
T Consensus 111 ~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~ 182 (403)
T PF06838_consen 111 EEVIGIRGNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIK 182 (403)
T ss_dssp HHHHTSSSSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHH
T ss_pred HHHhCCCCCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHH
Confidence 877654332111 56778888766 9999999999997665 343332 21 12334477888888
Q ss_pred HHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchh
Q 010842 271 VANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL 332 (499)
Q Consensus 271 ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~ 332 (499)
++|+. ++++.||-|||-+.=. ..+.-. +||.+..|.-|..+.. ..+|..++-+++.
T Consensus 183 ~vk~~~p~~iifVDNCYGEFvE~---~EP~~v---GADl~aGSLIKNpGGgiAptGGYIaGr~~l 241 (403)
T PF06838_consen 183 FVKEINPDVIIFVDNCYGEFVET---QEPTEV---GADLMAGSLIKNPGGGIAPTGGYIAGRKDL 241 (403)
T ss_dssp HHHHH-TTSEEEEE-TTTTTTSS---S-GGGG---T-SEEEEETTSGGGTTT-SS-EEEEESHHH
T ss_pred HHHhhCCCeEEEEeCCcceeccc---cCcccc---chhheeccceeCCCCCccCcCCEEechHHH
Confidence 88775 6899999999887422 122222 4999999999997543 2344444444443
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.53 E-value=0.022 Score=53.54 Aligned_cols=301 Identities=13% Similarity=0.071 Sum_probs=158.8
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh------CCCCCC---eEEeeCCC--CC
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA------GVSPAN---IRALPTSV--DA 224 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~------G~g~~~---v~~v~~~~--~~ 224 (499)
.+|+++|||||-+||+.||+... ...+|.+....|--+...+++. |-|... |+.-|+.+ .|
T Consensus 105 c~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrG 176 (452)
T KOG1403|consen 105 CFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRG 176 (452)
T ss_pred EEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccc
Confidence 48999999999999999998642 2445555444443333322221 222222 33334321 11
Q ss_pred CCc-----------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchh
Q 010842 225 NFS-----------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 225 ~~~-----------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
.|+ .-.+.+++.+++....|....+.++-.-.+--|.|-| ++++++..+.+|-.++.|..+-|+.
T Consensus 177 K~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFG 256 (452)
T KOG1403|consen 177 KFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFG 256 (452)
T ss_pred ccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccc
Confidence 121 2345677777766666654444444444444565533 6888999999999999999987765
Q ss_pred ccCccc-hhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 290 CICPEF-RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 290 ~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.....+ .....++ --|.+++ -|-++-....+++..+.+ +.++|.. ...|+..- +|.+
T Consensus 257 RvG~hyWafq~y~f-iPDIVtm--gKpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGnP 315 (452)
T KOG1403|consen 257 RVGSHYWAFQTYNF-IPDIVTM--GKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGNP 315 (452)
T ss_pred ccchhhhhhhhhcc-ccchhee--cccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCCc
Confidence 443222 1222221 1455554 244443444666666553 3355544 45555432 2333
Q ss_pred CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCc-e-EEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHF-A-LVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~-~-~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
.......+.|+....+. +.++..+..++|...|+++. ..+++++.+. + .+.+.+..+. .+..........+..
T Consensus 316 VsCAv~laVm~v~e~E~---Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~-~tRtP~tk~A~~~v~ 391 (452)
T KOG1403|consen 316 VSCAVGLAVMRVCEDEN---LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDR-KTRTPDTKEAHWVVN 391 (452)
T ss_pred hhHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeeccc-ccCCCcHHHHHHHHH
Confidence 33333344555544444 44556666777777666532 2455554331 1 1222222211 011111334566777
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
+|.+...+.++... -+++.+++-.- ---+++++++++..|.++..
T Consensus 392 rlke~y~VLlsaDG-Ph~NilKiKPP-mCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 392 RLKELYRVLLSADG-PHRNILKIKPP-MCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHhhhEEEecCC-CCCceeecCCC-cccChhhHHHHHHHHHHHHH
Confidence 88777766665322 13456766431 11367788888888877664
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.48 E-value=0.013 Score=55.38 Aligned_cols=285 Identities=15% Similarity=0.160 Sum_probs=162.5
Q ss_pred ccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHH
Q 010842 154 GGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLL 233 (499)
Q Consensus 154 ~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L 233 (499)
..|+-+-|||-|+..+..-.-... .+-.||+|.++.......+.-.|+- .+...|.=..++-.+|++.+
T Consensus 100 v~~vQslsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~ 168 (410)
T KOG1412|consen 100 VFGVQSLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGF 168 (410)
T ss_pred ccceeeccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHH
Confidence 356777888888776644322111 3446999999988888888888851 34444432222347888888
Q ss_pred HHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccch-----hhh-cCCC
Q 010842 234 RRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFR-----HYL-NGIE 303 (499)
Q Consensus 234 ~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~-----~~~-~g~~ 303 (499)
-..|+.... + -.+|+..+..||||. || ..+|+++.++.++.-..|-||-|++.--+... ... .|++
T Consensus 169 Lsdl~~APe-~--si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e 244 (410)
T KOG1412|consen 169 LSDLESAPE-G--SIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE 244 (410)
T ss_pred HHHHhhCCC-C--cEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence 877766432 1 123334444788885 55 46789999999999999999988764332211 111 2221
Q ss_pred CCceeEecccccccC--C-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC--CCcHHHHHHHH
Q 010842 304 RVDSFSFSPHKWLLS--Y-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR--FKSLRLWMVLR 378 (499)
Q Consensus 304 ~aDsi~~~~hK~l~~--p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~ 378 (499)
=+++-++-|.++. + .||--+.++++.......+...--++... +.+ ++|--+...|.
T Consensus 245 --~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~----------------SNPPAyGArIV~kvL~ 306 (410)
T KOG1412|consen 245 --LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNW----------------SNPPAYGARIVHKVLS 306 (410)
T ss_pred --EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhcc----------------CCCcchhhHHHHHHhc
Confidence 2567778887753 2 34444566776544333222211111110 111 01111111111
Q ss_pred -----HhcHHHHHHHHHHHHHHHHHHHHHHhcC--CC-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842 379 -----SYGVLNLQSHIRSDIRLAKMFEGFVKSD--PR-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG 450 (499)
Q Consensus 379 -----~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g 450 (499)
.-=...++.+..|..+++..|++.|..+ || |.-+ -.+.++++| .+. +..-++.|.++.
T Consensus 307 tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSy--TGL-----------tp~qV~~li~~h 372 (410)
T KOG1412|consen 307 TPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSY--TGL-----------TPAQVDHLIENH 372 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceee--cCC-----------CHHHHHHHHHhc
Confidence 1112446677788888999999998865 33 2111 123444444 332 334567787778
Q ss_pred CEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 451 RVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 451 ~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+|+... | |++++. .....++++..+|.+..+.+.
T Consensus 373 ~vyLl~~---G----RInisG--LN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 373 KVYLLSD---G----RINISG--LNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred eEEEecC---C----cEeeec--cccccHHHHHHHHHHHHHhhc
Confidence 7776543 1 666642 344678999999988887654
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.19 E-value=0.022 Score=54.78 Aligned_cols=221 Identities=13% Similarity=0.086 Sum_probs=120.1
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE- 303 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~- 303 (499)
.++++|+.|.+-.++......+++-- |--..++-+=+..+.+||++||+-++||.++-|+.....-+.+-..+++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 46778888877665443333444332 2223455566899999999999999999998776544433433333332
Q ss_pred CCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHH
Q 010842 304 RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVL 383 (499)
Q Consensus 304 ~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~ 383 (499)
-.|.+||+- |+.. .|++ .+.+ |....+| +.+..-+|-+++.+-+-..++.+..+
T Consensus 334 PpD~vTFSK-K~q~----gGff--h~~~-----frpn~pY--------------rifNTWmGdP~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 334 PPDVVTFSK-KFQT----GGFF--HDEE-----FRPNEPY--------------RIFNTWMGDPSKNLLLEEVVQEIKRE 387 (484)
T ss_pred Cccceehhh-hhhc----Cccc--cCcc-----cCCCchH--------------HHhhhhcCChHHHHHHHHHHHHHhHH
Confidence 278888763 4332 2222 1211 1111122 11112234444455554555554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842 384 NLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV 459 (499)
Q Consensus 384 g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 459 (499)
+ +++......++|...|.+ .|+.---..-+...+.+.+.. .....+++..+..+|.. +++.
T Consensus 388 ~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps---------~~~Rdk~i~~~~~nGv~-~GGC-- 452 (484)
T KOG1405|consen 388 D---LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS---------GSIRDKLILIARLNGVN-LGGC-- 452 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC---------hHHHHHHHHHHHHcCce-eccc--
Confidence 3 445555556666666554 343210001233444555543 34456777777778843 2332
Q ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 460 GGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
|...+|+-.+ ..-++.+.+-+++.+.++.+.
T Consensus 453 -g~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 453 -GDKSIRFRPS-LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -ccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence 3334666553 446788899999999887654
No 393
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.89 E-value=0.02 Score=53.89 Aligned_cols=154 Identities=18% Similarity=0.171 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeE-EEcCCCCchhHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLV-VYGSDQTHSTFAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~-i~~s~~~H~s~~ka~~ 206 (499)
..||.. .++.||.+.... . .-.-+||.|+-+||.-..+ |++. +++....+-.++....
T Consensus 68 dtLe~v----yA~vf~aE~a~V-----R-pq~isGTHAI~~aLfg~LR-----------pgDell~i~G~PYDTLeevIG 126 (416)
T COG4100 68 DTLERV----YAQVFGAEAALV-----R-PQIISGTHAIACALFGILR-----------PGDELLYITGSPYDTLEEVIG 126 (416)
T ss_pred hHHHHH----HHHHhcccccee-----e-eeeecchhHHHHHHHhccC-----------CCCeEEEecCCcchhHHHHhc
Confidence 345555 788888865421 0 1223567777777664432 3433 4455555666666554
Q ss_pred HhCCCCC-------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-----CcccccCChhHHHHHHHH
Q 010842 207 LAGVSPA-------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-----TSTTAVDNVEPLAEVANE 274 (499)
Q Consensus 207 ~~G~g~~-------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-----t~~G~id~l~~I~~ia~~ 274 (499)
+-|-|.. .-+.||...+| .+|.+.++..+++.++ ++...-+ -+.=.+++|+++..+.|+
T Consensus 127 ~rg~~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~~tk-------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~ 197 (416)
T COG4100 127 LRGEGQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISDRTK-------LIGIQRSKGYAWRPSLSIAEIEEMITFVKE 197 (416)
T ss_pred cCCCCcccHHHhCcceeecccccCC--cccHHHHHHhcCccce-------EEEEEeccCcCCCCcccHHHHHHHHHHHHh
Confidence 4332211 45678887766 9999999999998876 3333322 244456788888888887
Q ss_pred h--CCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc
Q 010842 275 Y--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL 317 (499)
Q Consensus 275 ~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~ 317 (499)
- ++.+.||-|||-+.= +..+.-. +||.+..+.-|.-+
T Consensus 198 inpn~ivFVDNCYGEFvE---~~EPt~v---GaDliAGSLIKNpG 236 (416)
T COG4100 198 INPNVIVFVDNCYGEFVE---EKEPTHV---GADLIAGSLIKNPG 236 (416)
T ss_pred cCCCEEEEEeccchhhhh---ccCcccc---chhhhccceeeCCC
Confidence 5 689999999988742 1111112 38888888888643
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.43 E-value=0.035 Score=53.35 Aligned_cols=260 Identities=15% Similarity=0.152 Sum_probs=144.3
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---C
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---D 263 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d 263 (499)
+.-.||+|.+++.-..+.-...|+ .+..+..-...+..+|.+.+-+.+.+.. .| -++++--+..|+||.= +
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p-~g--s~ilLhaCaHNPTGvDPt~e 218 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAP-EG--SIILLHACAHNPTGVDPTKE 218 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCC-CC--cEEEeehhhcCCCCCCccHH
Confidence 455799999998777777778888 6655543322245788877666665432 12 2445555567888864 4
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCc---cc--hhhh-cCCCCCceeEecccccccCC---CcceEEEEeCchhHH
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICP---EF--RHYL-NGIERVDSFSFSPHKWLLSY---LDCCCLWVKQPGLLV 334 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~---~~--~~~~-~g~~~aDsi~~~~hK~l~~p---~~~g~l~~r~~~~l~ 334 (499)
..++|.++.++.+..-+.|.||-|++.-.. .+ |... .| .--.++-+.-|.++.- .|+=-+++++.+...
T Consensus 219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g--~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG--HEILLAQSYAKNMGLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC--CceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence 467889999999999999999988764321 11 1111 11 1124566677776532 223234555554332
Q ss_pred HhhcC-----CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 010842 335 KALST-----DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR- 408 (499)
Q Consensus 335 ~~~~~-----~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~- 408 (499)
+.-++ +|-|-.... .+.|-...+---..|+.-=...+..+.+|.+.+++.+.+.|++...
T Consensus 297 rV~SQlk~liRpmYSnPP~--------------hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~ 362 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPPL--------------HGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSP 362 (427)
T ss_pred HHHHHHHHHhcccccCCCc--------------cchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCC
Confidence 22221 333332211 1111110000000111111234566778889999999999987521
Q ss_pred --eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 409 --FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 409 --~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
|+-+ -.+.+.+||.-.. .+..+.|..+..+|++.. -|+|+. ..+...+.++.++|
T Consensus 363 ~~W~hI-~~QIGMF~fTgl~-------------peQv~~l~ke~~iYmT~d-------GRiS~a--G~ss~nV~yLa~ai 419 (427)
T KOG1411|consen 363 GNWSHI-TKQIGMFCFTGLN-------------PEQVDWLTKEYHIYLTKD-------GRISMA--GLSSSNVPYLADAI 419 (427)
T ss_pred ccHHHH-HHhhheeeecCCC-------------HHHHHHHHhhheeeeccC-------ceEeec--cccccCCcccchhh
Confidence 1111 1356778875432 334566666666676632 377774 24455688888888
Q ss_pred HHHHH
Q 010842 487 MEGAD 491 (499)
Q Consensus 487 ~~~~~ 491 (499)
.++.+
T Consensus 420 h~vtk 424 (427)
T KOG1411|consen 420 HAVTK 424 (427)
T ss_pred HhHhc
Confidence 77654
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.14 E-value=0.17 Score=49.12 Aligned_cols=295 Identities=14% Similarity=0.111 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
..+||+++ +.|-++.|--... +--++.+.|+.-++.|..-|..... ....++..|+.+.+-++++.....
T Consensus 45 s~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~~----~~~~~p~~VVa~aPYY~~Y~~qt~ 114 (363)
T PF04864_consen 45 SPELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPNA----SPSSSPASVVAAAPYYSSYPEQTD 114 (363)
T ss_dssp -HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHHT-----TTSSSEEEEE-SS--CHHHHHCC
T ss_pred cHHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCCC----CCCCCCceeEecCCCccchHHHHH
Confidence 35677764 3466677753221 1124444444434555544443220 001145566666555555665555
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.+.- ......-|.. .|. .. ....+++=++|.|+||.|.+-. .+++.-+..++-|-||-
T Consensus 115 ~f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYY 172 (363)
T PF04864_consen 115 FFDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYY 172 (363)
T ss_dssp CT-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-
T ss_pred hccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeee
Confidence 5544 3344443332 122 11 1134678899999999998621 12344566778998874
Q ss_pred chhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 287 GSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
.. .+-+.-. -..-|.+-|...|.=+ +..-.|+-++||++...+. ..|+... ++..|
T Consensus 173 WP-----hyTpI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln-------------TiGvS 229 (363)
T PF04864_consen 173 WP-----HYTPITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN-------------TIGVS 229 (363)
T ss_dssp ST-----TTS---S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH-------------CSS--
T ss_pred cc-----cccccCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh-------------cccCc
Confidence 43 2222111 1135889999888643 3445899999998755332 2333221 12222
Q ss_pred CC--CCcHHHHHHHHH-hcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC------------CceEEEEEe
Q 010842 366 RR--FKSLRLWMVLRS-YGVL-----NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR------------HFALVCFRL 424 (499)
Q Consensus 366 r~--~~al~~~~~l~~-~g~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~------------~~~~v~f~~ 424 (499)
|- .+++++.-++.. ++.+ -+.--.+...+.=+.|.+.+.+...|.+.. +| ....-++++
T Consensus 230 ~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkC 309 (363)
T PF04864_consen 230 RDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKC 309 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEec
Confidence 22 245555443322 2221 111112222233345667777766676643 22 223344555
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...+ +..+. +.|.+.|++--++..++ +..++|+|+. -+++|.+.+++.|..+
T Consensus 310 e~ee-------d~DC~---~~l~~~~I~tr~G~~fga~~ryVRlSml---~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 310 EREE-------DEDCY---AVLREAKIITRSGVLFGADSRYVRLSML---KRDDDFDQLLERLSKL 362 (363)
T ss_dssp SSCG-------GSSHH---HHHHCTTEEEEEGGGGTS-TTEEEEESS---S-HHHHHHHHHHHHCC
T ss_pred CCcc-------cccHH---HHHHhCCcccCCCCccCCCCCeEEEecc---CCHHHHHHHHHHHHhh
Confidence 4321 11122 23334453322333343 2468999997 6889999999998753
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=91.87 E-value=0.42 Score=41.53 Aligned_cols=63 Identities=5% Similarity=-0.017 Sum_probs=45.9
Q ss_pred cccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 121 WLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
|....+..++.+++.+|+.+.+| .+-.. ...++|+|++.|+..++.+..+ ++..|+++.+.+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p-----d~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDA-----DMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccch-----hheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 44455678999999999999988 32111 1468999999998887776644 577788887765
Q ss_pred h
Q 010842 199 S 199 (499)
Q Consensus 199 ~ 199 (499)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 4
No 397
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=86.56 E-value=9.8 Score=36.57 Aligned_cols=117 Identities=21% Similarity=0.170 Sum_probs=68.2
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-ch-h--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHH
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HS-T--FAKVCKLAGVSPANIRALPTSVDANFSLSPQL 232 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~-s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~ 232 (499)
++|.||.++|..-..+|..+++ |. +.+.++-... -| . ..--..++|. .++.++...+ +.++ ..
T Consensus 67 lvT~GgiQSNh~r~tAavA~~l------Gl-~~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~d--~~~~-~~ 133 (323)
T COG2515 67 LVTYGGIQSNHVRQTAAVAAKL------GL-KCVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGTD--IGIN-AS 133 (323)
T ss_pred EEEecccchhHHHHHHHHHHhc------CC-cEEEEEeccccccccccchhhhhhcCc---eEEEecCCCC--hhhc-hh
Confidence 8999999999987777655432 22 3344433222 00 0 1222356788 8888875432 3222 23
Q ss_pred HHHHHHHHHHcCCccEEEEEecCCCcccc---cCChhHHHHHHHH-hCCEEEeeccccc
Q 010842 233 LRRAVEADVEAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANE-YGIWVHVDAAYAG 287 (499)
Q Consensus 233 L~~~i~~~~~~g~~p~~vv~t~gtt~~G~---id~l~~I~~ia~~-~~~~lhvD~A~g~ 287 (499)
.+...++-+++|.+|+ |+.-.|.++.|. +.=..||.+-+++ ..+-.+|.++-++
T Consensus 134 ~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~ 191 (323)
T COG2515 134 AEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSG 191 (323)
T ss_pred hHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCc
Confidence 3344444556788895 556666888554 4666788888877 4565666655333
No 398
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=70.34 E-value=17 Score=32.31 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=46.5
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..++......+.+.....++|+ ++...+++ +.++++..|.+..+.|... |+ .|.
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~v--iV--Gg~---------- 133 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVDV--IV--GGG---------- 133 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT--E--EE--ESH----------
T ss_pred CcEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCcE--EE--CCH----------
Confidence 345555555555668888899999 99988875 5788999998887777322 22 111
Q ss_pred HHHHHHHHhCCEEEe
Q 010842 267 PLAEVANEYGIWVHV 281 (499)
Q Consensus 267 ~I~~ia~~~~~~lhv 281 (499)
-+.++|+++|+..+.
T Consensus 134 ~~~~~A~~~gl~~v~ 148 (176)
T PF06506_consen 134 VVCRLARKLGLPGVL 148 (176)
T ss_dssp HHHHHHHHTTSEEEE
T ss_pred HHHHHHHHcCCcEEE
Confidence 147888999987543
No 399
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=70.33 E-value=35 Score=29.41 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=64.4
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--hhHHHHHHHH-hCCEE------Eeecc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--VEPLAEVANE-YGIWV------HVDAA 284 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--l~~I~~ia~~-~~~~l------hvD~A 284 (499)
-+..|.+-..-.|....+.||+.-++-..+| ++|.-.|.|-.|.-+| -+||.++|+. ||+-+ .|-|.
T Consensus 27 VlLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~ 102 (162)
T COG0386 27 VLLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGK 102 (162)
T ss_pred EEEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCC
Confidence 4445555444457778899999999888888 6888888888887654 7999999985 67633 45443
Q ss_pred ccchhccCccchhhh---cCCCCCceeEeccccccc
Q 010842 285 YAGSACICPEFRHYL---NGIERVDSFSFSPHKWLL 317 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~ 317 (499)
.+. |-++.+. .|......|-|+++|+|-
T Consensus 103 ~a~-----PLy~~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 103 NAH-----PLYKYLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred CCC-----cHHHHHHhcCCCCccCCccceeeEEEEE
Confidence 322 2233332 222336788999999874
No 400
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=65.47 E-value=1.5e+02 Score=29.54 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=58.1
Q ss_pred cEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch------hHHHHHHHhCCCCCCeEEeeCCCCCCCcc
Q 010842 155 GGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS------TFAKVCKLAGVSPANIRALPTSVDANFSL 228 (499)
Q Consensus 155 ~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~------s~~ka~~~~G~g~~~v~~v~~~~~~~~~~ 228 (499)
..+-.|||-.+.+++..+.... |.....+-++ .... -+.+.++.+|+ ....+.++
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl~~l~vt~~-~~~~~e~~~~n~~~~~~~lgv---d~~~i~~d------- 122 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GLNPLLVTVD-PGWNTELGVKNLNNLIKKLGF---DLHTITIN------- 122 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CCceEEEEEC-CCCCCHHHHHHHHHHHHHcCC---CeEEEeCC-------
Confidence 3577899988776664443221 2222223333 2222 25556677888 78777654
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
++.++............|.. .........+.++|+++|+.+++.|-.+.
T Consensus 123 -~~~~~~l~~~~~~~~~~pc~---------~c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 123 -PETFRKLQRAYFKKVGDPEW---------PQDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred -HHHHHHHHHHHHhccCCCch---------hhhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 44444444443332222321 11123356788999999999999986544
No 401
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=63.29 E-value=24 Score=31.77 Aligned_cols=53 Identities=8% Similarity=-0.048 Sum_probs=41.5
Q ss_pred HHHHHHHHHHH-Hc-CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 231 QLLRRAVEADV-EA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 231 ~~L~~~i~~~~-~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
++|..+++.-. +. ...-++|+.|=|++..|.++|++.-+++++++|+.+|.=|
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888887654 21 1233678899999989999999988899999999998743
No 402
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=60.47 E-value=1.1e+02 Score=28.18 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=53.4
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeE-E--EcCC-----CCc----hhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLV-V--YGSD-----QTH----STFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~-i--~~s~-----~~H----~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
++.|||-.+.+.+.++... |. ..+ + +.+. ..| ....+.|+.+|+ .++.++++...
T Consensus 2 vl~SGGkDS~~al~~a~~~---------G~-~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgi---p~~~i~~~~~~ 68 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALEE---------GH-EVRCLITVVPENEESYMFHTPNIELTRLQAEALGI---PLVKIETSGEK 68 (218)
T ss_pred eeecCcHHHHHHHHHHHHc---------CC-EEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCC---CEEEEECCCCC
Confidence 5778999888766554432 21 221 1 1121 113 345667888999 88888775211
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEE
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWV 279 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~l 279 (499)
....+.|..++.+..+.|..- + .+|.+. +-..+-++|.+.|+.+
T Consensus 69 --~~~~~~l~~~l~~~~~~g~~~-v--------v~G~i~sd~~~~~~e~v~~~~gl~~ 115 (218)
T TIGR03679 69 --EKEVEDLKGALKELKREGVEG-I--------VTGAIASRYQKSRIERICEELGLKV 115 (218)
T ss_pred --hHHHHHHHHHHHHHHHcCCCE-E--------EECCcccHhHHHHHHHHHHhCCCeE
Confidence 234456777776655444221 1 134442 3345556777777654
No 403
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=58.66 E-value=26 Score=31.62 Aligned_cols=49 Identities=24% Similarity=0.225 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 232 LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 232 ~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.=|..++-.+-+|..|..|++-.-+ ..|.....+++.++|++||+.++.
T Consensus 142 HTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 142 HTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEEE
Confidence 4466666666789999777776644 489999999999999999998853
No 404
>smart00642 Aamy Alpha-amylase domain.
Probab=56.81 E-value=25 Score=30.86 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=26.3
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
...|..++++++++-||++|+.+++|-+.-
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 357888999999999999999999997653
No 405
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=55.40 E-value=38 Score=30.55 Aligned_cols=70 Identities=14% Similarity=0.242 Sum_probs=44.6
Q ss_pred hHHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHhC
Q 010842 200 TFAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYG 276 (499)
Q Consensus 200 s~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~ 276 (499)
+++.++.+ ..+|.+.+.+.|.. | .-..++|+..-+.+.++|. -. -|||-| |.+++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~--G--l~~leE~~avAkA~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG--G--LKHLEELKAVAKACARNGF-----TL----EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T--T--TTTHHHHHHHHHHHHHCT------EE----EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC--C--cccHHHHHHHHHHHHHcCc-----ee----CCcCCcCHHHHHHHHHHHHHcC
Confidence 46666554 35666789999986 3 5578999988888888772 11 368888 78999999999999
Q ss_pred CEEEee
Q 010842 277 IWVHVD 282 (499)
Q Consensus 277 ~~lhvD 282 (499)
+..++=
T Consensus 203 v~~viP 208 (218)
T PF07071_consen 203 VEKVIP 208 (218)
T ss_dssp -S-B--
T ss_pred CCeecc
Confidence 766443
No 406
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=52.14 E-value=71 Score=31.18 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=31.5
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-hhHHHHHHHhCCCCCCeEEeeC
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH-STFAKVCKLAGVSPANIRALPT 220 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H-~s~~ka~~~~G~g~~~v~~v~~ 220 (499)
+++.|||.+|+..-.++.-+.. | -+..|+++.... ......++.+|. +++.++-
T Consensus 59 vv~~g~ssGN~g~alA~~a~~~------G-~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 59 VITVGAIQSNHARATALAAKKL------G-LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEcCCchhHHHHHHHHHHHHh------C-CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 7887776666643333222211 2 256788886432 223444688999 9988874
No 407
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=51.97 E-value=1.5e+02 Score=29.65 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=52.3
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVAN 273 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~ 273 (499)
++.+.+.+.-.|. ++.+... ...++++++.+++.-...|...+ +++-.|++.+... -++..|..+.+
T Consensus 214 n~~LL~~~a~~gk----PVilk~G----~~~t~~e~~~Ave~i~~~Gn~~i-~L~erg~s~yp~~~~~~ldl~~i~~lk~ 284 (360)
T PRK12595 214 NFELLKAAGRVNK----PVLLKRG----LSATIEEFIYAAEYIMSQGNGQI-ILCERGIRTYEKATRNTLDISAVPILKQ 284 (360)
T ss_pred CHHHHHHHHccCC----cEEEeCC----CCCCHHHHHHHHHHHHHCCCCCE-EEECCccCCCCCCCCCCcCHHHHHHHHH
Confidence 4444444443333 4455432 13699999999988777775442 2222244432211 47899999988
Q ss_pred HhCCEEEeeccccch
Q 010842 274 EYGIWVHVDAAYAGS 288 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~ 288 (499)
++++++.+|..|.++
T Consensus 285 ~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 285 ETHLPVMVDVTHSTG 299 (360)
T ss_pred HhCCCEEEeCCCCCc
Confidence 899999999999765
No 408
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=51.73 E-value=11 Score=40.41 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=47.1
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
..+|-..|...|+.+.. -+ ..=|+.| +-.=++++..|..++++++++-||++||-|++|-+++-
T Consensus 175 ~elG~T~IELMPv~e~p---~~-----------~sWGYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 175 KELGITHIELMPVAEHP---GD-----------RSWGYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred HHhCCCEEEEcccccCC---CC-----------CCCCCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 35555667777876421 11 1124444 44556788999999999999999999999999998876
Q ss_pred h
Q 010842 288 S 288 (499)
Q Consensus 288 ~ 288 (499)
+
T Consensus 239 F 239 (628)
T COG0296 239 F 239 (628)
T ss_pred C
Confidence 5
No 409
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=51.72 E-value=22 Score=34.62 Aligned_cols=62 Identities=27% Similarity=0.315 Sum_probs=49.0
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.+.+| .+|.+++++.++...+.|..-++++.|.|..++=+.++-.++.+.+.+. .+++++
T Consensus 14 TPF~~dg--~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 14 TPFDEDG--SVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred cCCCCCC--CcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 3555544 8999999999999998887777788888888888888888888888775 255555
No 410
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=51.44 E-value=36 Score=30.74 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
...=|..++=..-.|..|..|++..-+- .|...+.+++.++|++||+.++
T Consensus 136 ~GhtEaavdLa~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 136 RGHTEAAVDLARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSHHHHHHHHHHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CChHHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 3455666766677899998887777644 8999999999999999999875
No 411
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=50.48 E-value=36 Score=32.74 Aligned_cols=57 Identities=28% Similarity=0.382 Sum_probs=39.6
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
..|.++++ .+|.+.+++.++...+.|...+++..+.|....=+.+.-.++.+++.++
T Consensus 9 ~TPf~~dg--~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 9 VTPFKDDG--SVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 44555554 8999999999998888886666666555555555556667777766655
No 412
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.75 E-value=50 Score=27.14 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=49.0
Q ss_pred CCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--------CCh
Q 010842 194 SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--------DNV 265 (499)
Q Consensus 194 s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--------d~l 265 (499)
+.+...++..+++.+|+ ....||+.. ..++.++++..-+.- .+-..|.+..+-.|+-.+-.. -+.
T Consensus 43 ~QP~~~~i~~aa~~aGl---~y~~iPV~~---~~iT~~dV~~f~~Al-~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~ 115 (130)
T COG3453 43 GQPGFAAIAAAAEAAGL---TYTHIPVTG---GGITEADVEAFQRAL-DEAEGPVLAYCRSGTRSLNLYGLGELDGGMSR 115 (130)
T ss_pred CCCChHHHHHHHHhcCC---ceEEeecCC---CCCCHHHHHHHHHHH-HHhCCCEEeeecCCchHHHHHHHHHHhcCCCH
Confidence 34456678889999999 999999974 367777776554432 223347666666665432211 345
Q ss_pred hHHHHHHHHhCC
Q 010842 266 EPLAEVANEYGI 277 (499)
Q Consensus 266 ~~I~~ia~~~~~ 277 (499)
++|.++.+++|+
T Consensus 116 de~~a~g~a~G~ 127 (130)
T COG3453 116 DEIEALGQAAGF 127 (130)
T ss_pred HHHHHHHHhhCc
Confidence 666666666664
No 413
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=49.02 E-value=1e+02 Score=31.78 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=43.2
Q ss_pred chhHHHHHHHHHHHHhcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.+++.+|-.+++.|...--+|.. .++-.|..|+|+.+. +.+.|++.+++.+.+.++++.+.
T Consensus 637 qeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGMl---sd~kdleeLldlVaqkGKeieen 698 (838)
T KOG0630|consen 637 QEINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGML---SDEKDLEELLDLVAQKGKEIEEN 698 (838)
T ss_pred HHHhhccHHHHHHHhhhhhhcccCCccccceeEEEeccc---cchhhHHHHHHHHHHhchhhhhH
Confidence 34566777788887665545533 234467789999886 67889999999988877766543
No 414
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=48.17 E-value=83 Score=28.81 Aligned_cols=73 Identities=14% Similarity=0.240 Sum_probs=53.3
Q ss_pred hHHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHhC
Q 010842 200 TFAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYG 276 (499)
Q Consensus 200 s~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~ 276 (499)
.++.++.+ ..+|.+.+.+.|.. | .-..++++..-+.+.+.|.. --|||-| |.+++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~--G--l~~leE~~avA~aca~~g~~---------lEPTGGIdl~Nf~~I~~i~ldaG 202 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG--G--LKHLEEYAAVAKACAKHGFY---------LEPTGGIDLDNFEEIVQIALDAG 202 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC--C--cccHHHHHHHHHHHHHcCCc---------cCCCCCccHHhHHHHHHHHHHcC
Confidence 46666654 46777799999986 3 55788888888888777631 1478888 77999999999999
Q ss_pred CEEEeeccc
Q 010842 277 IWVHVDAAY 285 (499)
Q Consensus 277 ~~lhvD~A~ 285 (499)
+..++==.|
T Consensus 203 v~kviPHIY 211 (236)
T TIGR03581 203 VEKVIPHVY 211 (236)
T ss_pred CCeeccccc
Confidence 876554334
No 415
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=48.15 E-value=31 Score=34.63 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=55.0
Q ss_pred CCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCc-cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH
Q 010842 194 SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFS-LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA 272 (499)
Q Consensus 194 s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia 272 (499)
....|..+.|. +++.- ..++.+++..+ .+. .+.+.|-+.+.....+- -.||.+ ...-|.+.+++++.++|
T Consensus 97 ~~~~r~T~~K~-Rv~s~-nQQllRvD~Ee--~~~~~~~~~ll~~~~~~l~~~---~~vVLS--DY~KG~L~~~q~~I~~a 167 (467)
T COG2870 97 RDKNRPTIVKL-RVLSR-NQQLLRLDFEE--KFPIEDENKLLEKIKNALKSF---DALVLS--DYAKGVLTNVQKMIDLA 167 (467)
T ss_pred eecCCCceeee-eeecc-cceEEEecccc--cCcchhHHHHHHHHHHHhhcC---CEEEEe--ccccccchhHHHHHHHH
Confidence 34455555443 22222 11555555432 222 44555555555433321 123332 34689999999999999
Q ss_pred HHhCCEEEee------ccccchhccCccchh
Q 010842 273 NEYGIWVHVD------AAYAGSACICPEFRH 297 (499)
Q Consensus 273 ~~~~~~lhvD------~A~g~~~~~~~~~~~ 297 (499)
++.|+++.|| .-|.|..+..|..+.
T Consensus 168 r~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E 198 (467)
T COG2870 168 REAGIPVLVDPKGKDFEKYRGATLITPNLKE 198 (467)
T ss_pred HHcCCcEEECCCCcchhhhCCCeecCCCHHH
Confidence 9999999999 346666666665544
No 416
>PRK10638 glutaredoxin 3; Provisional
Probab=47.26 E-value=1e+02 Score=23.18 Aligned_cols=68 Identities=15% Similarity=0.215 Sum_probs=40.1
Q ss_pred CeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh
Q 010842 188 KLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV 265 (499)
Q Consensus 188 ~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l 265 (499)
+.++|....+.++ +.+.+...|+ ....++++.+ .+ ..+.+.+.......|.+++ +....|..+++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~------~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGD------AA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCC------HH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 4567877777766 5566777888 8888887643 12 3334444444456685433 33455655555
Q ss_pred hHH
Q 010842 266 EPL 268 (499)
Q Consensus 266 ~~I 268 (499)
.++
T Consensus 70 ~~~ 72 (83)
T PRK10638 70 YAL 72 (83)
T ss_pred HHH
Confidence 544
No 417
>PRK11633 cell division protein DedD; Provisional
Probab=47.18 E-value=84 Score=29.18 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcCC-EEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGR-VYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~-~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...+.|.++|...|. +|+.... .+| .+.|+-++ ++.++++.+..+..|+++
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~VG-P~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQG-KITRIYVG-PDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCC-cEEEEEeC-CCCCHHHHHHHHHHHHHh
Confidence 446788999999995 3433322 344 35688885 999999999999999885
No 418
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=46.90 E-value=95 Score=24.49 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=44.4
Q ss_pred CCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 187 HKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 187 ~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
.+.+||....+++| ..+.+.-.|+ ....+.++.+ .+..++.+.+.+.+.....|.+ ...| ...|..|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~V--fi~g-~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAV--FVGG-KLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeE--EECC-EEEcCHHH
Confidence 46677777777777 3445566677 7778887743 2445666677665544456743 3333 45677777
Q ss_pred hhHH
Q 010842 265 VEPL 268 (499)
Q Consensus 265 l~~I 268 (499)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 7654
No 419
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=46.32 E-value=35 Score=29.94 Aligned_cols=86 Identities=14% Similarity=0.302 Sum_probs=44.3
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC--CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN--FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
|++..+-+.++.........++-.|+ +++.++...... ..++.+.+.++++--......|.+|.+..|..-||.+
T Consensus 32 ~LKTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 32 GLKTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp T-SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 33444445454455567778888999 999998865321 2467888888776443334469999999999999985
Q ss_pred CChhHHHHHHHHhCCEE
Q 010842 263 DNVEPLAEVANEYGIWV 279 (499)
Q Consensus 263 d~l~~I~~ia~~~~~~l 279 (499)
+.+-|+..-|-
T Consensus 109 ------vg~lRk~Q~W~ 119 (164)
T PF03162_consen 109 ------VGCLRKLQGWS 119 (164)
T ss_dssp ------HHHHHHHTTB-
T ss_pred ------HHHHHHHcCCC
Confidence 44444555454
No 420
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=46.09 E-value=2.3e+02 Score=25.59 Aligned_cols=102 Identities=13% Similarity=0.104 Sum_probs=55.4
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccC--CeEEEcCCC---------CchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMH--KLVVYGSDQ---------THSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~--~~~i~~s~~---------~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
.+..|||..+.+.+.++... |.. ...+..+.. .+....+.++.+|+ .++.++++.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~~---------G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgi---pl~~i~~~~~~ 70 (194)
T cd01994 3 VALISGGKDSCYALYRALEE---------GHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGI---PLIRIEISGEE 70 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc---------CCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCC---cEEEEeCCCCc
Confidence 36789999988776665542 211 111111111 11235567888999 88888764321
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEE
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVH 280 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lh 280 (499)
.--.++|.+.+.+-.++|.. .+ .+|.++. -.-+-++|++.|+..+
T Consensus 71 --e~~~~~l~~~l~~~~~~g~~-~v--------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 71 --EDEVEDLKELLRKLKEEGVD-AV--------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred --hHHHHHHHHHHHHHHHcCCC-EE--------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 12236666666665443321 11 2455522 3556678888887653
No 421
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=45.88 E-value=56 Score=29.63 Aligned_cols=51 Identities=16% Similarity=0.089 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
....=|..++=..-.|..|..|++-.- +..|...+.+++.++|++|++.++
T Consensus 140 R~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 140 RGGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 334456666666678888877777774 458999999999999999999883
No 422
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=45.63 E-value=66 Score=31.10 Aligned_cols=62 Identities=21% Similarity=0.164 Sum_probs=39.2
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.++++ ++|.+.+++.++...+.|-.-+++..+.|....=+.+.-.++.+.+.+. ++++++
T Consensus 10 TPf~~dg--~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 10 THFDADG--SFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred cCCCCCC--CcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3555544 9999999999998888775555555554444444445555666555443 466665
No 423
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=43.42 E-value=1.6e+02 Score=25.04 Aligned_cols=54 Identities=20% Similarity=0.205 Sum_probs=37.9
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh--hHHHHHH
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV--EPLAEVA 272 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l--~~I~~ia 272 (499)
++..+++| --+.+.+++.+++-.+.....-+++.++|....+.++++ +++.+..
T Consensus 53 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 108 (167)
T PF00106_consen 53 KITFIECD-----LSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVF 108 (167)
T ss_dssp EEEEEESE-----TTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHH
T ss_pred cccccccc-----ccccccccccccccccccccccccccccccccccccccccchhhhhcc
Confidence 88899887 348889999988766444445577778887777777665 4444443
No 424
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=43.16 E-value=48 Score=31.96 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=39.6
Q ss_pred eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 215 IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 215 v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
....|.+++| .+|.+.+++.++...+.|...+++..+.|....=..+.-.++.+.+.+.
T Consensus 5 a~~TPf~~~g--~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 5 ALITPFKEDG--SVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred ceeCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 3445666655 8999999999988888776666655555555544555566666665554
No 425
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=42.80 E-value=58 Score=31.74 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=39.4
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.++++ ++|.+.+++.++.-.+.|-.-+++..+.|...+=+.+.-.++.+.+.+. ++++++
T Consensus 17 TPf~~dg--~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 17 TPFDADG--SFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCCCC--CcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4555544 9999999999998888775555555555544444445555666655443 366655
No 426
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=42.41 E-value=68 Score=29.51 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 232 LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 232 ~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.-|..++=..-.|..|..|++-.-+ ..|...+.+++.++|++||+.+
T Consensus 154 HTEaavdLa~lAGl~p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~ 200 (218)
T PRK00910 154 HTEGTVDLMQMAGLQPAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPV 200 (218)
T ss_pred ccHHHHHHHHHcCCCceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcE
Confidence 3355555555678888777776644 5699999999999999999988
No 427
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=42.19 E-value=73 Score=31.08 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=44.6
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeeccc
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
..++.++++..++.-.+. ....-+|+.+|+-|-|.- |...+|.++|++.|..+++|..-
T Consensus 109 p~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 578888888877664431 122246788888888887 55799999999999999999753
No 428
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=41.03 E-value=46 Score=31.95 Aligned_cols=64 Identities=27% Similarity=0.278 Sum_probs=39.8
Q ss_pred EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
...|.++++ .+|.+.+++.++...+.|-.-+++..+.|....=+.+.-.++.+.+.+. ++.+++
T Consensus 5 ~~TPf~~dg--~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 5 LVTPFTADG--EVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred eeCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345666654 9999999999998887775554444444444443445556666655543 355544
No 429
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=40.87 E-value=47 Score=32.12 Aligned_cols=58 Identities=24% Similarity=0.250 Sum_probs=38.5
Q ss_pred EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
...|.++++ .+|.+.+++.++...+.|...+++..+.|.-..=+.+.-.++.+.+.+.
T Consensus 9 ~~TPf~~dg--~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 9 LVTPFKEDG--SVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eeCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 344566554 8999999999998888887666655555555444445556666655553
No 430
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=40.81 E-value=1.4e+02 Score=29.62 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=31.2
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC--c------hhHHHHHHHhCCCCCCeEEeeCC
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT--H------STFAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~--H------~s~~ka~~~~G~g~~~v~~v~~~ 221 (499)
+++.|||.+|+....++.-+.. |+ +..|+++... + ..-...++.+|. +|+.++.+
T Consensus 69 vvs~ggs~gN~g~alA~~a~~~------Gl-~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~ 131 (337)
T TIGR01274 69 LVSIGGIQSNQTRQVAAVAAHL------GM-KCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDG 131 (337)
T ss_pred EEECCCCcchHHHHHHHHHHHc------CC-cEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCc
Confidence 6777766666543333222211 33 4567777532 1 244556788999 99988854
No 431
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=40.66 E-value=74 Score=29.52 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 233 LRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 233 L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
-|..++=..-.|..|..|++-. -+..|.....+++.++|++||+.+ ++
T Consensus 159 TEAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i-is 206 (230)
T PRK00014 159 TEGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA-LA 206 (230)
T ss_pred cHHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE-EE
Confidence 3455554555777787776666 345699999999999999999988 44
No 432
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=40.58 E-value=47 Score=32.27 Aligned_cols=57 Identities=23% Similarity=0.263 Sum_probs=39.2
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
.-|.++++ ++|.+.+++.++...+.|-.-+++..+.|....=+.+.-.++.+.+.+.
T Consensus 14 vTPf~~dg--~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 14 VTPFDADG--SFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred eCCcCCCC--CcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 34566554 8999999999988888776665655666665555556666776665553
No 433
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=40.49 E-value=75 Score=29.16 Aligned_cols=49 Identities=16% Similarity=0.161 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
...=|..++=..-.|..|..|++-.- +..|...+.+++.++|++||+.+
T Consensus 151 ~GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~ 199 (214)
T PRK01792 151 RGHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV 199 (214)
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE
Confidence 33456666666667888877777664 46699999999999999999988
No 434
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=40.10 E-value=1.4e+02 Score=26.45 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=36.5
Q ss_pred CeEEEcCCCC--chh---HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 188 KLVVYGSDQT--HST---FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 188 ~~~i~~s~~~--H~s---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.-+|+++... ... ..+..+..|. ++..+.+| --|.+++++.++...+...+...|+-.++....+.+
T Consensus 26 ~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~ 97 (181)
T PF08659_consen 26 RRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPI 97 (181)
T ss_dssp SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-G
T ss_pred CEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeeccccc
Confidence 3456666662 222 3344455577 89999987 458999999998866555344457777776666666
Q ss_pred CC
Q 010842 263 DN 264 (499)
Q Consensus 263 d~ 264 (499)
.+
T Consensus 98 ~~ 99 (181)
T PF08659_consen 98 QD 99 (181)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 435
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=40.00 E-value=88 Score=30.47 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=61.2
Q ss_pred CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhH
Q 010842 188 KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEP 267 (499)
Q Consensus 188 ~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~ 267 (499)
++-.++++..-.+..+...+-.- ....||+-.-....||-+.+++...+.. -.+|+.+...+.+++
T Consensus 75 kPd~IVpEiEAI~td~L~elE~~---G~~VVP~ArAt~ltMnRegiRrlAAeeL-----------glpTs~Y~fa~s~~e 140 (394)
T COG0027 75 KPDYIVPEIEAIATDALVELEEE---GYTVVPNARATKLTMNREGIRRLAAEEL-----------GLPTSKYRFADSLEE 140 (394)
T ss_pred CCCeeeehhhhhhHHHHHHHHhC---CceEccchHHHHhhhcHHHHHHHHHHHh-----------CCCCccccccccHHH
Confidence 33456677776777666555444 3357887654457999999999877653 345677888899999
Q ss_pred HHHHHHHhCCEEEeecc
Q 010842 268 LAEVANEYGIWVHVDAA 284 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A 284 (499)
+.+.|++-|++++|--.
T Consensus 141 ~~~a~~~iGfPcvvKPv 157 (394)
T COG0027 141 LRAAVEKIGFPCVVKPV 157 (394)
T ss_pred HHHHHHHcCCCeecccc
Confidence 99999999999998754
No 436
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=39.94 E-value=76 Score=29.26 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 232 LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 232 ~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
.=|..++=.+-.|..|..|++-.-+ ..|...+.+++.++|++||+.+ ++.
T Consensus 153 htEaavdLa~lAgl~P~avi~ei~~-~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 153 HTEATIDLMTLAGLKPAGVLCELTN-DDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred chHHHHHHHHHcCCCceEEEEEeec-CCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 3455666666678889877776633 5699999999999999999988 553
No 437
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=39.86 E-value=1.2e+02 Score=31.94 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=44.4
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccch
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGS 288 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~ 288 (499)
+|..++...+ .++.+++.+.|.+. .|-+|.++. .+..+....++++.+|+. ++.+++=|.|...
T Consensus 39 ~V~iiD~~~~---~~~~~~~~~~l~~~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 39 DVTFLDAMTG---PLTDEKLVERLRAH-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred ceEEeccccc---CCCHHHHHHHHHhc-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 7888876532 57788888777653 254666654 244566678888888887 8999998877543
No 438
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=39.73 E-value=96 Score=33.36 Aligned_cols=32 Identities=34% Similarity=0.528 Sum_probs=27.6
Q ss_pred ccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
.|-|.-.+|-.++|++||++++.-+||||+..
T Consensus 167 pgPitt~~EA~eF~k~yG~PvI~KAAyGGGGR 198 (1176)
T KOG0369|consen 167 PGPITTVEEALEFVKEYGLPVIIKAAYGGGGR 198 (1176)
T ss_pred CCCcccHHHHHHHHHhcCCcEEEeecccCCCc
Confidence 36667788999999999999999999998743
No 439
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=39.71 E-value=19 Score=34.77 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=28.6
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
......|..++++++++.||++|+.|++|-+..
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred ccccccchhhhhhhhhhccccccceEEEeeecc
Confidence 345678999999999999999999999998753
No 440
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=39.68 E-value=21 Score=37.45 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=27.0
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.+..|..++++++++-||++|+.+++|.+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 356899999999999999999999999874
No 441
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=39.60 E-value=1.6e+02 Score=24.73 Aligned_cols=69 Identities=20% Similarity=0.235 Sum_probs=46.8
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---------CChhHHHHHH
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---------DNVEPLAEVA 272 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---------d~l~~I~~ia 272 (499)
.+.+...|+ ..+.+|+... .++.++++...+-- +....|+++-+..|. -+|.+ -+.++|.+.+
T Consensus 50 ~~~a~~~gl---~y~~iPv~~~---~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~ 121 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTAG---DITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRA 121 (135)
T ss_pred HHHHHHCCC---eEEEeecCCC---CCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 456677899 9999998753 56666654443322 233468888888888 67764 4667888888
Q ss_pred HHhCCE
Q 010842 273 NEYGIW 278 (499)
Q Consensus 273 ~~~~~~ 278 (499)
++.|.-
T Consensus 122 ~~~G~~ 127 (135)
T TIGR01244 122 QAAGYD 127 (135)
T ss_pred HHcCCC
Confidence 877653
No 442
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=39.08 E-value=67 Score=31.09 Aligned_cols=63 Identities=11% Similarity=0.221 Sum_probs=39.1
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcC-CccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAG-LVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.-|.++++ ++|.+.+++.++...+.| -.-+++..+.|....=+.+.-.++.+.+.+. .+++++
T Consensus 9 ~TPf~~dg--~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 75 (290)
T TIGR00683 9 LVSFNEDG--TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 75 (290)
T ss_pred ecCCCCCC--CcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34556554 999999999999887777 5454555555544444445555666655443 355554
No 443
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=38.82 E-value=3.5e+02 Score=25.70 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=57.3
Q ss_pred CCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cc---cCChhHHHH
Q 010842 195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TA---VDNVEPLAE 270 (499)
Q Consensus 195 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~---id~l~~I~~ 270 (499)
...+..+.+.+.-.|. ++.+... ...++++++.+++.-...|..-+ ++.-.|++.+ +. .-++..|..
T Consensus 118 ~~~n~~LL~~~a~~gk----PVilk~G----~~~t~~e~~~Ave~i~~~Gn~~i-~l~~rG~s~y~~~~~~~~dl~~i~~ 188 (260)
T TIGR01361 118 NMQNFELLKEVGKQGK----PVLLKRG----MGNTIEEWLYAAEYILSSGNGNV-ILCERGIRTFEKATRNTLDLSAVPV 188 (260)
T ss_pred cccCHHHHHHHhcCCC----cEEEeCC----CCCCHHHHHHHHHHHHHcCCCcE-EEEECCCCCCCCCCcCCcCHHHHHH
Confidence 3345666666655554 5556543 23489999999998877665442 3333345333 43 367899999
Q ss_pred HHHHhCCEEEeeccccch
Q 010842 271 VANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~ 288 (499)
+.+.+++++..|..|.++
T Consensus 189 lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 189 LKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHhhCCCEEEcCCCCCC
Confidence 988889999999999765
No 444
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=38.22 E-value=54 Score=31.65 Aligned_cols=62 Identities=23% Similarity=0.261 Sum_probs=36.4
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.+++ +.+|.+.+++.++...+.|..-+++..+.|....=+.+.-.++.+++.++ ++++++
T Consensus 11 TPf~~d--g~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 11 TPFNAD--GSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp --BETT--SSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCC--cCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 344544 48888888888888777776555555555554444445566666665553 455555
No 445
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=37.86 E-value=59 Score=31.49 Aligned_cols=63 Identities=21% Similarity=0.279 Sum_probs=40.9
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHH-cCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVE-AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.-|.+++ +++|.+.+++.++...+ .|-.-+++..+.|....=+.+.-.++.+.+.++ .+.+++
T Consensus 12 ~TPf~~d--g~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~via 78 (293)
T PRK04147 12 LTPFDED--GQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIA 78 (293)
T ss_pred ECcCCCC--CCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEe
Confidence 3455554 49999999999998887 776665655555555444455666666665553 355544
No 446
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=37.23 E-value=70 Score=31.30 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=40.2
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|-.-+++..+.|...+=+.+.-.++.+.+.+. ++.+++
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~ 82 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFV 82 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 58999999999999888886666666666666666666667777766553 355554
No 447
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=37.07 E-value=1.8e+02 Score=24.95 Aligned_cols=62 Identities=18% Similarity=0.093 Sum_probs=40.3
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
.+.+.+.++..|. ++..+.+-+| |.+.+++++++..++ ...- ++++.|.+..|..|-..+..
T Consensus 22 ~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~D-lVittGG~s~g~~D~t~~al 83 (152)
T cd00886 22 GPALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVD-LILTTGGTGLAPRDVTPEAT 83 (152)
T ss_pred HHHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCC-EEEECCCcCCCCCcCcHHHH
Confidence 3456667888898 8887776544 778888888775541 0122 44455667788888766543
No 448
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=36.94 E-value=1.6e+02 Score=27.20 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=60.9
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCC-----ch----hHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQT-----HS----TFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~-----H~----s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
..+.|||..+++...++.+. |. .....+.+... |. .....++.+|+ .++..+++..
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~---------G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g~- 70 (223)
T COG2102 4 IALYSGGKDSFYALYLALEE---------GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSGE- 70 (223)
T ss_pred EEEEecCcHHHHHHHHHHHc---------CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCcc-
Confidence 46788999987665555543 22 23333444433 22 24455778888 8888877632
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEE
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWV 279 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~l 279 (499)
..-..++|.+++..-..+ .| .+|+| +..+.+-.+|++-|+.+
T Consensus 71 -~e~eve~L~~~l~~l~~d-----~i-------v~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 71 -EEREVEELKEALRRLKVD-----GI-------VAGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred -chhhHHHHHHHHHhCccc-----EE-------EEchhhhHHHHHHHHHHHHHhCCEE
Confidence 245778888888764311 12 24666 55778888999998865
No 449
>PLN02417 dihydrodipicolinate synthase
Probab=36.92 E-value=60 Score=31.25 Aligned_cols=63 Identities=19% Similarity=0.118 Sum_probs=40.9
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.-|.++++ .+|.+.+++.++...+.|-.-+++..+.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 10 ~TPf~~~g--~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~ 75 (280)
T PLN02417 10 KTPYLPDG--RFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIG 75 (280)
T ss_pred eCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44566554 8999999999988888776666665666655555555666666655443 355544
No 450
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=36.92 E-value=1.9e+02 Score=29.18 Aligned_cols=47 Identities=30% Similarity=0.374 Sum_probs=34.6
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC-ChhHHHHHHHHhCCEEEeec
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-NVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-~l~~I~~ia~~~~~~lhvD~ 283 (499)
.-|++.|++.++.. +|.+|++-.++. + ++++++++|++||..+.+=+
T Consensus 200 ~kD~eVLeaaLe~~--~G~kpLL~SAt~--------e~Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 200 EKDPLVLEKAAEVA--EGERCLLASANL--------DLDYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred cCCHHHHHHHHHHh--CCCCcEEEecCc--------hhhHHHHHHHHHHhCCeEEEEc
Confidence 56999999998764 456675433333 3 79999999999999887643
No 451
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=36.20 E-value=3.5e+02 Score=25.84 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=49.4
Q ss_pred CCeEEEcCCCCchhHHHHHH---HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 187 HKLVVYGSDQTHSTFAKVCK---LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
...+|++.+....-..-+.+ ..|. ++..+|+|- -|++++++..++...++..+-++|-++|....|.+
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DL-----s~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADL-----SDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcC-----CChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 35577777665533222222 2456 888999884 36677777776665555566678888888888865
Q ss_pred -CChhHHHHHH
Q 010842 263 -DNVEPLAEVA 272 (499)
Q Consensus 263 -d~l~~I~~ia 272 (499)
.+++++.++-
T Consensus 102 ~~~~~~~~~mi 112 (265)
T COG0300 102 ELSLDEEEEMI 112 (265)
T ss_pred hCChHHHHHHH
Confidence 3455555543
No 452
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=36.17 E-value=1.7e+02 Score=24.43 Aligned_cols=61 Identities=15% Similarity=0.086 Sum_probs=40.0
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
..+.+...++..|. ++...++-.| |.+.+++.+++..++. =++.+.|-+..|..|-..+..
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~~----DlvittGG~g~g~~D~t~~ai 80 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASREA----DLVLTTGGTGVGRRDVTPEAL 80 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhcC----CEEEECCCCCCCCCcchHHHH
Confidence 44556677788888 8887765543 7788888887654421 245555667778777766543
No 453
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=35.59 E-value=3.3e+02 Score=27.82 Aligned_cols=89 Identities=19% Similarity=0.226 Sum_probs=56.3
Q ss_pred CeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC--------c
Q 010842 188 KLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT--------S 258 (499)
Q Consensus 188 ~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt--------~ 258 (499)
+.++|+|...-.. +.--+..+|+..+++...+ ..+++++.+.+++. +|.++|+-.-.| .
T Consensus 121 ~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 121 GKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred CcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCC
Confidence 3678888555443 4445778888655555543 46889998888763 355555544322 2
Q ss_pred ccccCCh----hHHHHHHHHhCCEEEe------eccccch
Q 010842 259 TTAVDNV----EPLAEVANEYGIWVHV------DAAYAGS 288 (499)
Q Consensus 259 ~G~id~l----~~I~~ia~~~~~~lhv------D~A~g~~ 288 (499)
.|.+..+ .++.++||++|++++. ||+-+|.
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGP 228 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGP 228 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCc
Confidence 3766555 4566789999998854 4555554
No 454
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=35.24 E-value=68 Score=31.11 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=40.5
Q ss_pred EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEE
Q 010842 216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVH 280 (499)
Q Consensus 216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lh 280 (499)
..-|.+++| ++|.+.+++.++...+.|-.-+++..+.|...+=+.+.-.++.+.+.+. ++.++
T Consensus 8 ~~TPf~~dg--~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi 73 (294)
T TIGR02313 8 LITPFKRNG--DIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFA 73 (294)
T ss_pred eeCCcCCCC--CcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 345666655 9999999999999888886555555555554444445556666554432 35554
No 455
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=34.12 E-value=79 Score=32.80 Aligned_cols=52 Identities=23% Similarity=0.209 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHH-HhCCEEEee
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVAN-EYGIWVHVD 282 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~-~~~~~lhvD 282 (499)
+-+.|++.|.+-.+... |-+|++. +|=++|.| |||+.+++-++ ++|+++++=
T Consensus 81 ~~~~L~~~i~ei~~~~~-p~~ifv~-~TC~t~iIGdDle~va~~~~~~~gipVV~v 134 (457)
T CHL00073 81 DYEELKRLCLQIKKDRN-PSVIVWI-GTCTTEIIKMDLEGMAPKLEAEIGIPIVVA 134 (457)
T ss_pred CHHHHHHHHHHHHHhCC-CCEEEEE-ccCcHHhhccCHHHHHHHHHHhhCCCEEEE
Confidence 45688888888766553 4322222 22246777 99999987554 789988653
No 456
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.60 E-value=4.3e+02 Score=26.42 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=54.8
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-----CcccccCChhHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-----TSTTAVDNVEPLAEVA 272 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-----t~~G~id~l~~I~~ia 272 (499)
++.+.+++.-.|. ++.+... ...+++++..+++.-...|..- ++++-.|. +.+=..-|+..|..+.
T Consensus 197 n~~LL~~va~t~k----PVllk~G----~~~t~ee~~~A~e~i~~~Gn~~-viL~erG~rtf~s~y~~~~~dl~ai~~lk 267 (352)
T PRK13396 197 NFSLLKKVGAQDK----PVLLKRG----MAATIDEWLMAAEYILAAGNPN-VILCERGIRTFDRQYTRNTLDLSVIPVLR 267 (352)
T ss_pred CHHHHHHHHccCC----eEEEeCC----CCCCHHHHHHHHHHHHHcCCCe-EEEEecCCccCcCCCCCCCcCHHHHHHHH
Confidence 4555555444443 5555532 3569999999998877666533 34444433 2223457899999998
Q ss_pred HHhCCEEEeeccccchh
Q 010842 273 NEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~ 289 (499)
+.+++++++|..|+.+.
T Consensus 268 ~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 268 SLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HhhCCCEEECCcccCCc
Confidence 78899999999998753
No 457
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.18 E-value=30 Score=36.88 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=27.6
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.+....|..++++++++-||++||-+++|.++.
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 345667888999999999999999999998764
No 458
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=32.55 E-value=37 Score=29.74 Aligned_cols=48 Identities=19% Similarity=0.358 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC--CEEEeeccccc
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG--IWVHVDAAYAG 287 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~--~~lhvD~A~g~ 287 (499)
|..+|+++++.+.. +|+.- +|.+-.|+++.+..++.| +.+|||=..|.
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56677777766543 33332 567789999999999886 78899966554
No 459
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=31.10 E-value=2.8e+02 Score=23.52 Aligned_cols=62 Identities=23% Similarity=0.268 Sum_probs=40.0
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE 270 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ 270 (499)
.-+.+...++.+|. ++..+.+-.| |.+.|.++|++..+. .-+|+.| |.+..|.-|-..+..+
T Consensus 28 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 28 NGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred cHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 44567777888898 8887776544 678888888765432 1244444 6666777777655443
No 460
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=30.73 E-value=6.3e+02 Score=26.22 Aligned_cols=126 Identities=21% Similarity=0.122 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCch---hHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHS---TFA 202 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~---s~~ 202 (499)
...++..+.+.+.+.+.-+.. -|++.|||-.+.+.+..+++.. .+ ..+.-..+-.+ ..... ...
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~~---~~~~~~t~~~~~~~~~~E~~~A~ 302 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--PR---GPVHTFSIGFEGSPDFDESPYAR 302 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--CC---CCceEEEEecCCCCCCChHHHHH
Confidence 345556655556655543332 3688999987766655554321 00 00011112222 11222 455
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
+.++.+|+ +...+.+++ +++.+.+.+.......|+. ....-++-.+.+.++++|+.++.+
T Consensus 303 ~vA~~lg~---~~~~i~~~~--------~~~~~~~~~~v~~~~~p~~---------~~~~~~~~~l~~~a~~~G~~vllt 362 (467)
T TIGR01536 303 KVADHLGT---EHHEVLFSV--------EEGLDALPEVIYHLEDPTT---------IRASIPLYLLSKLAREDGVKVVLS 362 (467)
T ss_pred HHHHHhCC---cCeEEECCH--------HHHHHHHHHHHHhhCCCCC---------CchHHHHHHHHHHHHhcCCEEEEe
Confidence 67888999 777776653 2333333322221112321 112235567788899999998887
Q ss_pred cc
Q 010842 283 AA 284 (499)
Q Consensus 283 ~A 284 (499)
|-
T Consensus 363 G~ 364 (467)
T TIGR01536 363 GE 364 (467)
T ss_pred cC
Confidence 63
No 461
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=30.71 E-value=90 Score=30.15 Aligned_cols=63 Identities=19% Similarity=0.304 Sum_probs=39.6
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.-|.++++ .+|.+.+++.++...+. |-.-+++..+.|....=..+.-.++.+.+.+. .+.+++
T Consensus 9 ~TPf~~dg--~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 9 LTPFDENG--EINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred ECCCCCCC--CCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 34556554 89999999999988877 76555555555554444445555666555443 355555
No 462
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=29.63 E-value=4.1e+02 Score=28.37 Aligned_cols=126 Identities=22% Similarity=0.158 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC--eEEEcCCCCch----hH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK--LVVYGSDQTHS----TF 201 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~--~~i~~s~~~H~----s~ 201 (499)
..+...+.+-+.+.+-.+.. .|++.|||-.+.+.|..+++..... .. ..|=. ...++ -.
T Consensus 213 ~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~~~~-------~~~~fsvg~-~~~~~~D~~~a 277 (542)
T COG0367 213 EHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEELGKE-------GKTTFTVGF-EDSDSPDAKYA 277 (542)
T ss_pred HHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhcccc-------ceeeeEeec-CCCCCchHHHH
Confidence 34444444445544433332 5799999987666666655432100 01 11211 22221 24
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.+++..+|. ..+.+.+ ..+++..++.+-...-..| ...++..|+--+++.+++++.++..
T Consensus 278 ~~~A~~lg~---~h~~~~~--------~~~e~~~~~~~vv~~~~~p---------~~~~~~~ply~~~~~a~~~g~kVvL 337 (542)
T COG0367 278 RAVAKFLGT---PHHEIIL--------TNEELLNALPEVVKALDTP---------GGMAASIPLYLLSRKARAEGEKVVL 337 (542)
T ss_pred HHHHHHhCC---CcEEEee--------cHHHHHHHHHHHHhhcCCC---------CcccchhHHHHHHHhhhhcCcEEee
Confidence 566778888 5555543 4566777766543322222 2256668899999999999988887
Q ss_pred e-----ccccch
Q 010842 282 D-----AAYAGS 288 (499)
Q Consensus 282 D-----~A~g~~ 288 (499)
. .-+||.
T Consensus 338 SGeGADElFgGY 349 (542)
T COG0367 338 SGEGADELFGGY 349 (542)
T ss_pred cCccHHHHhcCC
Confidence 4 457776
No 463
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=29.38 E-value=54 Score=28.97 Aligned_cols=51 Identities=12% Similarity=0.268 Sum_probs=38.8
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
+-|...|++.++. -++.|.|+.- ..+-++.|.++.++.|+.+..|.=++|-
T Consensus 11 K~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Ge 61 (174)
T TIGR00334 11 KDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGE 61 (174)
T ss_pred chHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchH
Confidence 7789999888742 2667776542 3355788888899999999999988775
No 464
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=28.85 E-value=4e+02 Score=26.73 Aligned_cols=125 Identities=14% Similarity=0.232 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCC-----CChhHHHh----c------C----CCCCCCCCCCHHHHHHH
Q 010842 18 DAQEFRKQAHQMVDFIADYYQNIES---YPVLTQ-----VEPGFLRS----A------L----PDSAPHRPESFETILKD 75 (499)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~l~~----~------~----~~~~p~~~~~~~~i~~~ 75 (499)
+++.+.+++.++++-+..|+..-.. .|..+. ..-+.|+- . + +..-++++....++.+.
T Consensus 2 tR~~w~~~~~~ll~p~~~~~s~~~~~~~~P~~~~a~~~~~~a~~LEgfaR~l~g~ap~l~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T PF10022_consen 2 TRADWVEALDKLLEPLLPYLSPGGARIRMPGESGAHYDRKAADYLEGFARPLWGAAPWLAGGGEDDDTEEGKLREKLREL 81 (361)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCcCCcCcchhHHHHHHHHHHHHHHHHHhcCCCcCcccccccHHHHHHH
Confidence 5678888888888888888765332 222221 11111210 0 0 11223455666778888
Q ss_pred HHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC
Q 010842 76 VQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP 145 (499)
Q Consensus 76 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~ 145 (499)
..+-+..+. ...||.|+++........-..+.+....+-.....|+ |....-.+.+++||...-+.+
T Consensus 82 ~~~gi~~Gt-dP~spdyw~~~~~~dQ~~VEaa~la~aL~~a~~~lW~--~L~~~~k~~l~~wL~~~~~~~ 148 (361)
T PF10022_consen 82 YRKGIANGT-DPKSPDYWGFIGDYDQRLVEAASLALALLRAPEWLWD--PLDEEEKENLVDWLKQIRGIK 148 (361)
T ss_pred HHHHHHhcC-CCCCccccCCcccchhhHhHHHHHHHHHHHCHHHHHh--hCCHHHHHHHHHHHHhcCcCC
Confidence 887776665 4589999998765433333333333333322223343 556677888999999877664
No 465
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.83 E-value=5e+02 Score=24.52 Aligned_cols=84 Identities=8% Similarity=0.033 Sum_probs=56.2
Q ss_pred CCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccc----cCChhHHH
Q 010842 195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTA----VDNVEPLA 269 (499)
Q Consensus 195 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~----id~l~~I~ 269 (499)
...++.+.+++.-.|. ++.+... .-.++++++.+++.-...|..- |+.++ |++.+.. .-++..|.
T Consensus 108 ~~~n~~LL~~va~tgk----PVilk~G----~~~t~~e~~~A~e~i~~~Gn~~--i~L~eRg~~~Y~~~~~n~~dl~ai~ 177 (250)
T PRK13397 108 NMQNFEFLKTLSHIDK----PILFKRG----LMATIEEYLGALSYLQDTGKSN--IILCERGVRGYDVETRNMLDIMAVP 177 (250)
T ss_pred cccCHHHHHHHHccCC----eEEEeCC----CCCCHHHHHHHHHHHHHcCCCe--EEEEccccCCCCCccccccCHHHHH
Confidence 3446666666655544 5666542 2579999999998877766533 33333 4332222 45788888
Q ss_pred HHHHHhCCEEEeeccccch
Q 010842 270 EVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~ 288 (499)
.+.+..++++++|..|.++
T Consensus 178 ~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 178 IIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred HHHHHhCCCeEECCCCCCc
Confidence 8888899999999989766
No 466
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=28.69 E-value=57 Score=27.17 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=29.2
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.++.+.-++.+++-.. ...| +|+++.|. .+-+++.++|+++++++..=
T Consensus 64 ~l~~~~r~~~l~~l~~-~~~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YNPP-CIIVTRGL------EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT-S--EEEETTT---------HHHHHHHHHCT--EEEE
T ss_pred HCCHHHHHHHHHHHhC-CCCC-EEEEECcC------CCCHHHHHHHHHhCCcEEEc
Confidence 5777777777766543 3345 57777765 57899999999999998653
No 467
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism]
Probab=28.31 E-value=74 Score=28.18 Aligned_cols=71 Identities=23% Similarity=0.208 Sum_probs=47.5
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
+.-.+.++++++|+..=+|.-+.......+..+..+..+..-+...++.|=.-..| ...-+++-.++..+.
T Consensus 26 ~~i~l~el~~e~~~~~~~de~r~s~~vD~d~~~~~le~~~~~~~~Ivd~H~~hl~~~~dlVvVLR~~p~~L~ 97 (180)
T COG1936 26 KVIELNELAKENGLYTEYDELRKSVIVDVDKLRKRLEELLREGSGIVDSHLSHLLPDCDLVVVLRADPEVLY 97 (180)
T ss_pred ceeeHHHHHHhcCCeeccCCccceEEeeHHHHHHHHHHHhccCCeEeechhhhcCCCCCEEEEEcCCHHHHH
Confidence 44566789999999999988766555555555555544334567888999888888 445555545555553
No 468
>COG0439 AccC Biotin carboxylase [Lipid metabolism]
Probab=28.05 E-value=2.4e+02 Score=29.31 Aligned_cols=31 Identities=35% Similarity=0.335 Sum_probs=27.5
Q ss_pred ccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
.|.+++.++..+++++.|.+|+|=+++|++.
T Consensus 135 ~~~~~~~ee~~~~a~~iGyPVivKa~~GgGg 165 (449)
T COG0439 135 DGAVADNEEALAIAEEIGYPVIVKAAAGGGG 165 (449)
T ss_pred CCCcCCHHHHHHHHHHcCCCEEEEECCCCCc
Confidence 5668899999999999999999999998763
No 469
>PRK05402 glycogen branching enzyme; Provisional
Probab=27.60 E-value=42 Score=37.23 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=27.1
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.+...|..++++++++-||++||.|++|.++.
T Consensus 307 i~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~N 338 (726)
T PRK05402 307 PTSRFGTPDDFRYFVDACHQAGIGVILDWVPA 338 (726)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34567888999999999999999999997754
No 470
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=27.53 E-value=56 Score=30.88 Aligned_cols=29 Identities=28% Similarity=0.203 Sum_probs=23.0
Q ss_pred ccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|.+.+-+++.++++++++-++||+.|--
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 46666778888888999999999998743
No 471
>PRK12313 glycogen branching enzyme; Provisional
Probab=27.53 E-value=44 Score=36.46 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=26.0
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.....|..++++++++.||++||-|+.|.++.
T Consensus 212 i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~n 243 (633)
T PRK12313 212 PTSRYGTPEDFMYLVDALHQNGIGVILDWVPG 243 (633)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34467888899999999999999999997653
No 472
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=27.45 E-value=77 Score=31.75 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+.++.++.|+...+.|..-++.....+.. ..-..+.+++|.++|+++|+.+++|-.-
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp 69 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISP 69 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-C
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 67888888888888886554444444443 2344577899999999999999999653
No 473
>PRK05872 short chain dehydrogenase; Provisional
Probab=27.28 E-value=4.9e+02 Score=24.84 Aligned_cols=59 Identities=17% Similarity=0.092 Sum_probs=35.1
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
....+....++.+ ..+..+++| -.|.+++++.+++..+....+-+|+.++|....+.+.
T Consensus 44 ~~l~~~~~~l~~~-~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~ 102 (296)
T PRK05872 44 AELAALAAELGGD-DRVLTVVAD-----VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVA 102 (296)
T ss_pred HHHHHHHHHhcCC-CcEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcc
Confidence 3444445555432 256666676 3478888888876554433455778888766555443
No 474
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.25 E-value=5.5e+02 Score=25.72 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=49.4
Q ss_pred eEEEcCCCCchhHHHH---HHHhCCCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 189 LVVYGSDQTHSTFAKV---CKLAGVSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 189 ~~i~~s~~~H~s~~ka---~~~~G~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
.+++.-+..|.--..| ++++|.|- |..+.-..+++| .=-.-.++++|.+..-....+-+|-+-+-+|+.|-..
T Consensus 260 gvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG--~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~a 337 (440)
T KOG1394|consen 260 GVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG--AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAA 337 (440)
T ss_pred eEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc--chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHH
Confidence 4555566666543332 55666653 333333334444 2233455666654221112235788888889999777
Q ss_pred ChhHHHHHHHHhCCE
Q 010842 264 NVEPLAEVANEYGIW 278 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~ 278 (499)
..++|..+-.++...
T Consensus 338 E~~Ai~~vf~~~~~~ 352 (440)
T KOG1394|consen 338 EAEAIKRVFGEHNIA 352 (440)
T ss_pred HHHHHHHHhccCCcc
Confidence 777777777666554
No 475
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.24 E-value=5.9e+02 Score=24.76 Aligned_cols=84 Identities=13% Similarity=0.042 Sum_probs=44.1
Q ss_pred EEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHH
Q 010842 156 GVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLR 234 (499)
Q Consensus 156 g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~ 234 (499)
.++|+||+ .+-.+|+..|+.. -..++.+-+.....+..-..-+.| ++...-+|- -|.+++.
T Consensus 41 vLITGgg~GlGr~ialefa~rg-----------~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdi-----s~~eei~ 102 (300)
T KOG1201|consen 41 VLITGGGSGLGRLIALEFAKRG-----------AKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDI-----SDREEIY 102 (300)
T ss_pred EEEeCCCchHHHHHHHHHHHhC-----------CeEEEEeccccchHHHHHHHHhcC--ceeEEEecC-----CCHHHHH
Confidence 46787776 5666777777642 123444444443333332233334 566666663 2556666
Q ss_pred HHHHHHHHcCCccEEEEEecCCC
Q 010842 235 RAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 235 ~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
+..++-+++...+.++|=++|--
T Consensus 103 ~~a~~Vk~e~G~V~ILVNNAGI~ 125 (300)
T KOG1201|consen 103 RLAKKVKKEVGDVDILVNNAGIV 125 (300)
T ss_pred HHHHHHHHhcCCceEEEeccccc
Confidence 65555444433555566555543
No 476
>PLN03244 alpha-amylase; Provisional
Probab=27.22 E-value=45 Score=36.79 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=29.5
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
+++...|..++++++++-||+.||-|+.|-++.-
T Consensus 432 ApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH 465 (872)
T PLN03244 432 AASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSY 465 (872)
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 4566788899999999999999999999988743
No 477
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=27.11 E-value=2.2e+02 Score=28.12 Aligned_cols=21 Identities=19% Similarity=0.091 Sum_probs=14.6
Q ss_pred CChhHHHHHHHHhCCEEEeec
Q 010842 263 DNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 263 d~l~~I~~ia~~~~~~lhvD~ 283 (499)
.-+.++++.++++++.++.||
T Consensus 199 tAv~~~a~aa~~~~v~VIaDG 219 (343)
T TIGR01305 199 SAVIECADAAHGLKGHIISDG 219 (343)
T ss_pred HHHHHHHHHhccCCCeEEEcC
Confidence 334555555667789999996
No 478
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=26.93 E-value=5.6e+02 Score=24.59 Aligned_cols=78 Identities=23% Similarity=0.108 Sum_probs=48.5
Q ss_pred ccCHHHHHHHHHHHHHcC-CccEEEEEecCCCcccccCChhHHHHHHHHhCCE--EEe-eccccchhccCccchhhhcCC
Q 010842 227 SLSPQLLRRAVEADVEAG-LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW--VHV-DAAYAGSACICPEFRHYLNGI 302 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~--lhv-D~A~g~~~~~~~~~~~~~~g~ 302 (499)
.+|+++.+..++.-.... ..++.++. .|+-|.++.-.+|+.+.+++... ++| +-|.+++.+.+=
T Consensus 71 ~I~i~dse~v~raI~~~~~~~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL--------- 138 (285)
T PF01972_consen 71 YIDIDDSEFVLRAIREAPKDKPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL--------- 138 (285)
T ss_pred eEcHhhHHHHHHHHHhcCCCCceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH---------
Confidence 455555555544433222 23433332 57889999999999999998543 333 456655544310
Q ss_pred CCCceeEeccccccc
Q 010842 303 ERVDSFSFSPHKWLL 317 (499)
Q Consensus 303 ~~aDsi~~~~hK~l~ 317 (499)
.||-|..++|-.++
T Consensus 139 -aADeIvM~p~a~LG 152 (285)
T PF01972_consen 139 -AADEIVMGPGAVLG 152 (285)
T ss_pred -hCCeEEECCCCccC
Confidence 28999999988877
No 479
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=26.78 E-value=2.6e+02 Score=24.46 Aligned_cols=56 Identities=29% Similarity=0.345 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEec-CC------------CcccccCChhHHHHHHHHhCCEEEee
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATV-GT------------TSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gt------------t~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.++.++-++.++.-.+.|..-+++.-+. +. ...+..|+|+.+.+.|+++|+.|++-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 5677777777777666665543333222 11 11245589999999999999999884
No 480
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=26.65 E-value=45 Score=36.17 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=26.0
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
++...|..++++++++.||++|+.+++|.++.
T Consensus 198 ~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~N 229 (613)
T TIGR01515 198 PTSRFGTPDDFMYFVDACHQAGIGVILDWVPG 229 (613)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 34567888899999999999999999997653
No 481
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=26.62 E-value=3.1e+02 Score=22.75 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=39.0
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
..+.+.+.++..|. +++...+-.| |.+.+++.+++..+. .-+|+.+ |-+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~---~~~~~~~v~D-----d~~~I~~~l~~~~~~---~dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGI---EVTRYVIVPD-----DKEAIKEALREALER---ADLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCC---eEEEEEEeCC-----CHHHHHHHHHHHHhC---CCEEEEc-CCCCCCCCcCcHHHH
Confidence 44567777888898 7766555433 778888888776542 2244444 555567777766643
No 482
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=26.50 E-value=3.4e+02 Score=27.51 Aligned_cols=66 Identities=15% Similarity=0.132 Sum_probs=37.5
Q ss_pred EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842 156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235 (499)
Q Consensus 156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~ 235 (499)
.++-++|.-+-..|...|++. ...|++-+-+-.+..++....+- ++..+.+| ..|.++|++
T Consensus 4 ilviGaG~Vg~~va~~la~~~-----------d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD-----~~d~~al~~ 64 (389)
T COG1748 4 ILVIGAGGVGSVVAHKLAQNG-----------DGEVTIADRSKEKCARIAELIGG---KVEALQVD-----AADVDALVA 64 (389)
T ss_pred EEEECCchhHHHHHHHHHhCC-----------CceEEEEeCCHHHHHHHHhhccc---cceeEEec-----ccChHHHHH
Confidence 456666766666666666542 13455533333333333333333 56666666 458889988
Q ss_pred HHHHH
Q 010842 236 AVEAD 240 (499)
Q Consensus 236 ~i~~~ 240 (499)
+|++.
T Consensus 65 li~~~ 69 (389)
T COG1748 65 LIKDF 69 (389)
T ss_pred HHhcC
Confidence 88764
No 483
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=26.47 E-value=1.1e+02 Score=29.30 Aligned_cols=56 Identities=13% Similarity=0.225 Sum_probs=38.6
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
.-|.++ | .+|.+.+++.++.-.+.|-.-+++..+.|....=+.+.-.++.+.+.+.
T Consensus 9 ~TPf~~-g--~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 9 ITPFTG-N--KIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred ecCcCC-C--CcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 345553 4 8999999999988888776666666666666555556666666655553
No 484
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=26.44 E-value=1.2e+02 Score=30.64 Aligned_cols=45 Identities=40% Similarity=0.589 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
|++.|+++++.. .+.+|.+-.+|. ++.++++++|++||..+.+=+
T Consensus 107 D~evl~aale~~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v~s 151 (386)
T PF03599_consen 107 DPEVLKAALEAC--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIVSS 151 (386)
T ss_dssp HHHHHHHHHHHT--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEEE-
T ss_pred CHHHHHHHHHHh--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEEEe
Confidence 788888887654 456676644444 468899999999998887643
No 485
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=26.33 E-value=6.5e+02 Score=24.99 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=30.6
Q ss_pred ccCHHHHHHHHHHHH---HcCCccEEEEEecCCCccccc--CChhHHHHHHHHhCCEEEeec
Q 010842 227 SLSPQLLRRAVEADV---EAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~---~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~~~lhvD~ 283 (499)
-.+.+..+.++..-- +-|.-|--|+.|--.+..|.- .-+.+.++.|+++|.+++.||
T Consensus 159 V~T~e~a~~Li~aGAD~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADG 220 (346)
T PRK05096 159 VVTGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDG 220 (346)
T ss_pred ccCHHHHHHHHHcCCCEEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecC
Confidence 446666666655321 112223233444333333332 335566667888999999996
No 486
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=26.06 E-value=1.2e+02 Score=29.90 Aligned_cols=20 Identities=20% Similarity=0.539 Sum_probs=16.6
Q ss_pred CChhHHHHHHHHhCCEEEee
Q 010842 263 DNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 263 d~l~~I~~ia~~~~~~lhvD 282 (499)
.||....++|+++|+++++-
T Consensus 63 ~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 63 RDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp G-HHHHHHHHHHTT-EEEEE
T ss_pred hhHHHHHHHHHHcCcEEEec
Confidence 68999999999999999876
No 487
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=25.74 E-value=61 Score=30.64 Aligned_cols=28 Identities=32% Similarity=0.315 Sum_probs=21.5
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.|..-+.+++.++|+++++-++||+.|-
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 4555567788888888888888888874
No 488
>PLN00196 alpha-amylase; Provisional
Probab=25.50 E-value=46 Score=34.25 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=26.2
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+..|..++++++++-||++|+.+++|.+.
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV~ 114 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIVI 114 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 45788999999999999999999999875
No 489
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=24.92 E-value=93 Score=28.80 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 231 QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 231 ~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
+.|.++++...+.+.+.-++-........+.++-|.+|.++|+++|+
T Consensus 14 ~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv 60 (223)
T PF06415_consen 14 PVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGV 60 (223)
T ss_dssp HHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCC
Confidence 56777777665555444344333333445666888899999999884
No 490
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=24.72 E-value=5.6e+02 Score=23.71 Aligned_cols=98 Identities=15% Similarity=0.078 Sum_probs=54.0
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-----Cc----hhHHHHHHHhCCCCCCeEEeeCCCCCCCc
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-----TH----STFAKVCKLAGVSPANIRALPTSVDANFS 227 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-----~H----~s~~ka~~~~G~g~~~v~~v~~~~~~~~~ 227 (499)
++.|||..+++....+..+ . .- .....+++.. .| .-+...++.+|+ .++.++.... ..
T Consensus 5 ~l~SGGKDS~~al~~a~~~-~-~v------~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algi---pl~~~~~~~~--~e 71 (223)
T TIGR00290 5 ALISGGKDSCLALYHALKE-H-EV------ISLVNIMPENEESYMFHGVNAHLTDLQAESIGI---PLIKLYTEGT--EE 71 (223)
T ss_pred EEecCcHHHHHHHHHHHHh-C-ee------EEEEEEecCCCCcccccccCHHHHHHHHHHcCC---CeEEeecCCC--cc
Confidence 6788999988766665543 2 10 1111122322 23 235567888999 7777765422 23
Q ss_pred cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEE
Q 010842 228 LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWV 279 (499)
Q Consensus 228 ~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~l 279 (499)
--.++|++++.+. | +-.| .+|.++ .-.-+-.+|.+.|+..
T Consensus 72 ~~~e~l~~~l~~~---g--v~~v-------v~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 72 DEVEELKGILHTL---D--VEAV-------VFGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHHHHHHHHHHc---C--CCEE-------EECCcccHHHHHHHHHHHHhcCCEE
Confidence 3455555555442 2 1111 367663 3456677888888765
No 491
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=24.14 E-value=3.4e+02 Score=26.69 Aligned_cols=46 Identities=28% Similarity=0.251 Sum_probs=32.8
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.-|++.|++.++.. +|.+|.+-.++ .+.++++.++|++||..+++=
T Consensus 136 ~kD~evleaale~~--~g~~pLInSat--------~en~~~i~~lA~~y~~~Vva~ 181 (319)
T PRK04452 136 EKDAEVLEKVAEAA--EGERCLLGSAE--------EDNYKKIAAAAMAYGHAVIAW 181 (319)
T ss_pred CCCHHHHHHHHHHh--CCCCCEEEECC--------HHHHHHHHHHHHHhCCeEEEE
Confidence 55999999998765 34556442222 235999999999999887653
No 492
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=24.04 E-value=1.3e+02 Score=28.31 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=53.7
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc--CCCCch-hHH---HHHHHhCCCCCCeEEeeCCCCCCCccCH
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG--SDQTHS-TFA---KVCKLAGVSPANIRALPTSVDANFSLSP 230 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~--s~~~H~-s~~---ka~~~~G~g~~~v~~v~~~~~~~~~~d~ 230 (499)
+-.|||..+.+.|..+.... | .+.+.++ |...-. ++. ..+...|+ +..+++++ .|++
T Consensus 22 vAfSGGvDSslLa~la~~~l--------G-~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi---~H~~i~~~-----~~~~ 84 (269)
T COG1606 22 VAFSGGVDSSLLAKLAKEAL--------G-DNVVAVTVDSPYIPRREIEEAKNIAKEIGI---RHEFIKMN-----RMDP 84 (269)
T ss_pred EEecCCccHHHHHHHHHHHh--------c-cceEEEEEecCCCChhhhhHHHHHHHHhCC---cceeeehh-----hcch
Confidence 77888888777666654321 2 2222221 211111 233 34566788 88888876 4553
Q ss_pred HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 231 QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 231 ~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
+--+..-. +. ..+--+=.+.|.+.++++|.-+++||+-+.
T Consensus 85 ~~~~n~~~--------rC---------Y~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 85 EFKENPEN--------RC---------YLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred hhccCCCC--------cc---------hHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 22111111 11 112223457788999999999999998643
No 493
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=24.01 E-value=1.8e+02 Score=30.13 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 232 LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 232 ~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.=|.+++=.+-.|..|..|++-..+-..|...+.+++.++|++|++.+ ++
T Consensus 177 htEaavdLarlAgl~Paavi~Ei~~~~dG~m~~~~~~~~fA~~h~L~~-v~ 226 (450)
T PLN02831 177 HTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKI-IS 226 (450)
T ss_pred hHHHHHHHHHHcCCCceEEEEEeccCCCCCccChHHHHHHHHHcCCcE-EE
Confidence 345566656667888887777775434689999999999999999988 44
No 494
>PRK10785 maltodextrin glucosidase; Provisional
Probab=23.82 E-value=50 Score=35.73 Aligned_cols=29 Identities=10% Similarity=0.200 Sum_probs=25.6
Q ss_pred cccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
..|..++++++++-||++|+.|++|.++-
T Consensus 221 ~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 221 QLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46778899999999999999999998753
No 495
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=23.80 E-value=1.9e+02 Score=26.45 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=44.2
Q ss_pred CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhH
Q 010842 188 KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEP 267 (499)
Q Consensus 188 ~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~ 267 (499)
+.++++... .....+.++..|. .++..+.+ |.+.|.++++... .|+...+.+.....+--..
T Consensus 24 ~V~~l~R~~-~~~~~~~l~~~g~---~vv~~d~~-------~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRDP-SSDRAQQLQALGA---EVVEADYD-------DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESSS-HHHHHHHHHHTTT---EEEES-TT--------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEecc-chhhhhhhhcccc---eEeecccC-------CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 455555443 3334445566777 66544332 7899999887422 3444444433444455678
Q ss_pred HHHHHHHhCCEEEe
Q 010842 268 LAEVANEYGIWVHV 281 (499)
Q Consensus 268 I~~ia~~~~~~lhv 281 (499)
|++.|++.|+..+|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 88999999987766
No 496
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=23.70 E-value=2.1e+02 Score=28.09 Aligned_cols=20 Identities=35% Similarity=0.448 Sum_probs=18.6
Q ss_pred cCChhHHHHHHHHhCCEEEe
Q 010842 262 VDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 262 id~l~~I~~ia~~~~~~lhv 281 (499)
.|||+.+.+.||++|+-+|.
T Consensus 69 ~DpL~~~I~eaHkrGlevHA 88 (311)
T PF02638_consen 69 FDPLEFMIEEAHKRGLEVHA 88 (311)
T ss_pred ccHHHHHHHHHHHcCCEEEE
Confidence 79999999999999998883
No 497
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=23.38 E-value=6e+02 Score=23.52 Aligned_cols=98 Identities=22% Similarity=0.181 Sum_probs=53.3
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-----Cc----hhHHHHHHHhCCCCCCeEEeeCCCCCCCc
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-----TH----STFAKVCKLAGVSPANIRALPTSVDANFS 227 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-----~H----~s~~ka~~~~G~g~~~v~~v~~~~~~~~~ 227 (499)
+..|||-.+++.+.++... . .- .......+.. .| .-+...|+.+|+ .++.+.+.. .+.
T Consensus 5 vl~SGGKDS~lAl~~~~~~-~-~V------~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algi---Pl~~~~~~~--~~e 71 (222)
T TIGR00289 5 VLYSGGKDSILALYKALEE-H-EV------ISLVGVFSENEESYMFHSPNLHLTDLVAEAVGI---PLIKLYTSG--EEE 71 (222)
T ss_pred EEecCcHHHHHHHHHHHHc-C-ee------EEEEEEcCCCCCccccccCCHHHHHHHHHHcCC---CeEEEEcCC--chh
Confidence 6789999988777766543 1 10 1111222221 22 346677889999 777776542 122
Q ss_pred cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEE
Q 010842 228 LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWV 279 (499)
Q Consensus 228 ~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~l 279 (499)
-..++|.+.+ .+.|.. .| .+|.++ .-..+-.+|++.|+..
T Consensus 72 ~~~~~l~~~l---~~~gv~--~v-------v~GdI~s~~qr~~~e~vc~~~gl~~ 114 (222)
T TIGR00289 72 KEVEDLAGQL---GELDVE--AL-------CIGAIESNYQKSRIDKVCRELGLKS 114 (222)
T ss_pred HHHHHHHHHH---HHcCCC--EE-------EECccccHHHHHHHHHHHHHcCCEE
Confidence 2334444443 332311 11 367773 3466777888888765
No 498
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=23.22 E-value=5e+02 Score=25.54 Aligned_cols=55 Identities=20% Similarity=0.172 Sum_probs=32.8
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--------HHHHHHHhCCCCCCeEEeeCC
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--------FAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--------~~ka~~~~G~g~~~v~~v~~~ 221 (499)
++|+|+|.+|...-.++..+.. | -+..|+++...-.. -...++.+|. +|+.++-+
T Consensus 67 vvt~g~s~gN~g~alA~~a~~~------G-~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga---~vi~~~~~ 129 (331)
T PRK03910 67 LITAGAIQSNHARQTAAAAAKL------G-LKCVLLLENPVPTEAENYLANGNVLLDDLFGA---EIHVVPAG 129 (331)
T ss_pred EEEcCcchhHHHHHHHHHHHHh------C-CcEEEEEcCCCCcccccccCCCcHHHHHHcCC---EEEEeCcc
Confidence 7788877766643333222221 2 25677777655432 2356788899 88888743
No 499
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=23.00 E-value=5.8e+02 Score=25.05 Aligned_cols=55 Identities=15% Similarity=0.116 Sum_probs=29.1
Q ss_pred EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCC
Q 010842 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~ 221 (499)
+++.++|.+|...-.++..+.. |. +.+++++...-.. -...++.+|. +++.++.+
T Consensus 73 vv~~~~ssGN~g~alA~~a~~~------G~-~~~ivvp~~~~~~~~~~l~~~~Ga---~v~~~~~~ 128 (329)
T PRK14045 73 VITVGAVHSNHAFVTGLAAKKL------GL-DAVLVLRGKEELKGNYLLDKIMGI---ETRVYEAK 128 (329)
T ss_pred EEEeCccHHHHHHHHHHHHHHc------CC-eEEEEEeCCCCCCcCHHHHHHCCC---EEEEECCC
Confidence 6665666666644333222211 22 4567777433222 1134577888 88887753
No 500
>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Probab=22.88 E-value=51 Score=25.55 Aligned_cols=24 Identities=25% Similarity=0.373 Sum_probs=17.9
Q ss_pred hHH-HHHHHHhCCEEEeeccccchh
Q 010842 266 EPL-AEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 266 ~~I-~~ia~~~~~~lhvD~A~g~~~ 289 (499)
+.| .++++..++|||+|..-|...
T Consensus 20 e~L~~k~~~~~D~wfH~~~~pg~hv 44 (90)
T PF05670_consen 20 EMLTKKYARPNDLWFHADDFPGPHV 44 (90)
T ss_pred HHHHHHhhhhcceeEeccCCCCCEE
Confidence 445 678899999999997554443
Done!