Query 010842
Match_columns 499
No_of_seqs 358 out of 3303
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 15:24:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 1.5E-74 5.1E-79 602.3 54.3 467 14-495 3-480 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 1.4E-74 4.9E-79 600.9 50.7 465 17-497 1-475 (475)
3 3vp6_A Glutamate decarboxylase 100.0 1.1E-68 3.7E-73 561.4 56.8 475 12-494 14-506 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 5.1E-69 1.8E-73 562.3 52.6 467 17-496 1-477 (486)
5 2okj_A Glutamate decarboxylase 100.0 1.1E-65 3.7E-70 539.3 53.3 477 9-493 8-502 (504)
6 2jis_A Cysteine sulfinic acid 100.0 5.4E-64 1.8E-68 527.5 50.8 468 15-492 32-514 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 6.5E-63 2.2E-67 517.3 51.3 462 13-493 25-496 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 4.8E-49 1.6E-53 407.5 38.4 411 51-495 7-436 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 3.7E-46 1.3E-50 389.9 38.4 414 47-496 16-447 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 3.9E-41 1.3E-45 352.5 30.5 392 59-496 35-440 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 1.3E-40 4.4E-45 349.8 32.0 391 60-496 69-472 (514)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 4E-39 1.4E-43 324.7 25.4 380 60-495 21-445 (450)
13 3f9t_A TDC, L-tyrosine decarbo 100.0 1.9E-35 6.6E-40 299.2 37.3 382 61-491 4-396 (397)
14 2z67_A O-phosphoseryl-tRNA(SEC 100.0 1.3E-36 4.3E-41 314.5 27.9 398 14-489 26-454 (456)
15 1wyu_B Glycine dehydrogenase s 100.0 5.9E-31 2E-35 273.3 31.6 391 51-491 31-439 (474)
16 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 1.3E-29 4.4E-34 251.4 29.4 389 60-496 39-464 (501)
17 1wyu_A Glycine dehydrogenase ( 100.0 8.2E-29 2.8E-33 254.7 29.2 377 50-489 30-436 (438)
18 3nnk_A Ureidoglycine-glyoxylat 100.0 2E-28 6.7E-33 249.3 29.5 359 86-494 8-391 (411)
19 4hvk_A Probable cysteine desul 100.0 1.2E-27 4E-32 240.7 31.1 342 92-495 3-375 (382)
20 3isl_A Purine catabolism prote 100.0 4.6E-28 1.6E-32 247.0 28.4 357 87-493 7-390 (416)
21 4eb5_A Probable cysteine desul 100.0 2.9E-27 9.8E-32 238.2 28.9 342 92-495 3-375 (382)
22 3kgw_A Alanine-glyoxylate amin 100.0 1.7E-27 5.8E-32 240.7 25.9 358 88-496 20-391 (393)
23 2dr1_A PH1308 protein, 386AA l 100.0 5.5E-27 1.9E-31 236.5 29.3 349 91-494 21-380 (386)
24 2yrr_A Aminotransferase, class 100.0 2.1E-27 7.3E-32 236.3 25.0 341 95-491 4-351 (353)
25 2huf_A Alanine glyoxylate amin 100.0 5.4E-27 1.8E-31 237.3 27.8 353 89-495 17-385 (393)
26 3lvm_A Cysteine desulfurase; s 100.0 2.1E-26 7.1E-31 235.4 32.3 343 91-495 24-401 (423)
27 3zrp_A Serine-pyruvate aminotr 100.0 2E-27 6.7E-32 239.5 23.4 317 124-494 30-364 (384)
28 2z9v_A Aspartate aminotransfer 100.0 2.6E-26 8.8E-31 232.2 31.2 353 88-494 7-372 (392)
29 1iug_A Putative aspartate amin 100.0 5.1E-27 1.7E-31 233.7 25.3 340 95-495 5-350 (352)
30 3e9k_A Kynureninase; kynurenin 100.0 7.9E-27 2.7E-31 241.8 27.2 357 91-493 69-461 (465)
31 3ffr_A Phosphoserine aminotran 100.0 1.1E-27 3.6E-32 239.5 19.4 343 91-490 4-361 (362)
32 1vjo_A Alanine--glyoxylate ami 100.0 1.3E-26 4.4E-31 234.6 27.3 317 125-490 63-392 (393)
33 1t3i_A Probable cysteine desul 100.0 1.8E-26 6E-31 235.5 28.3 321 128-493 71-413 (420)
34 2ch1_A 3-hydroxykynurenine tra 99.9 1.1E-26 3.6E-31 235.4 23.9 358 87-495 14-385 (396)
35 1eg5_A Aminotransferase; PLP-d 99.9 2.5E-25 8.6E-30 224.0 33.0 341 92-495 4-378 (384)
36 1kmj_A Selenocysteine lyase; p 99.9 1.7E-25 5.7E-30 227.1 29.6 319 127-493 65-405 (406)
37 3f0h_A Aminotransferase; RER07 99.9 6.2E-26 2.1E-30 228.1 24.8 340 95-492 23-373 (376)
38 3dzz_A Putative pyridoxal 5'-p 99.9 1E-25 3.5E-30 227.7 25.9 335 104-493 43-389 (391)
39 1j32_A Aspartate aminotransfer 99.9 6.4E-26 2.2E-30 229.1 23.2 332 104-493 46-387 (388)
40 3vax_A Putative uncharacterize 99.9 2.4E-26 8.2E-31 233.1 19.8 352 88-492 19-399 (400)
41 1svv_A Threonine aldolase; str 99.9 3.2E-25 1.1E-29 221.1 26.2 322 102-492 26-357 (359)
42 1m32_A 2-aminoethylphosphonate 99.9 1.9E-25 6.3E-30 223.4 24.0 314 129-491 37-363 (366)
43 3cai_A Possible aminotransfera 99.9 2E-25 7E-30 226.8 24.0 342 91-489 28-405 (406)
44 1elu_A L-cysteine/L-cystine C- 99.9 3.2E-25 1.1E-29 223.9 24.3 315 128-489 58-388 (390)
45 1b9h_A AHBA synthase, protein 99.9 1.7E-24 5.8E-29 218.8 29.3 332 105-492 18-387 (388)
46 2w8t_A SPT, serine palmitoyltr 99.9 2.9E-24 1E-28 220.0 31.1 301 128-497 108-419 (427)
47 1xi9_A Putative transaminase; 99.9 4.2E-25 1.4E-29 224.7 24.4 330 105-495 58-405 (406)
48 2bkw_A Alanine-glyoxylate amin 99.9 2.3E-25 7.9E-30 224.5 22.1 352 90-492 4-383 (385)
49 2gb3_A Aspartate aminotransfer 99.9 3.4E-25 1.2E-29 225.6 22.6 327 105-495 60-404 (409)
50 1v72_A Aldolase; PLP-dependent 99.9 1.9E-25 6.6E-30 222.6 20.4 303 127-493 41-353 (356)
51 4dq6_A Putative pyridoxal phos 99.9 1.4E-24 4.7E-29 219.4 26.7 324 104-490 48-390 (391)
52 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.4E-25 4.9E-30 224.9 18.1 300 127-493 51-370 (371)
53 1gd9_A Aspartate aminotransfer 99.9 1E-24 3.4E-29 220.5 23.5 331 104-493 42-386 (389)
54 1c7n_A Cystalysin; transferase 99.9 2.1E-24 7.1E-29 218.9 26.0 334 104-496 47-396 (399)
55 3tqx_A 2-amino-3-ketobutyrate 99.9 6.4E-24 2.2E-28 215.1 29.3 301 128-493 87-396 (399)
56 1o4s_A Aspartate aminotransfer 99.9 1.4E-24 4.9E-29 219.5 23.5 324 104-491 57-387 (389)
57 1qz9_A Kynureninase; kynurenin 99.9 4.9E-24 1.7E-28 217.3 27.4 311 129-493 71-402 (416)
58 3l8a_A METC, putative aminotra 99.9 2.7E-24 9.2E-29 219.9 24.3 332 105-491 78-420 (421)
59 3nra_A Aspartate aminotransfer 99.9 1.2E-24 4E-29 221.2 21.3 318 120-494 73-406 (407)
60 2fnu_A Aminotransferase; prote 99.9 1.7E-24 5.9E-29 217.4 22.2 332 105-493 14-372 (375)
61 3kax_A Aminotransferase, class 99.9 1.2E-23 4E-28 212.0 27.0 326 104-490 40-382 (383)
62 2c81_A Glutamine-2-deoxy-scyll 99.9 4.1E-24 1.4E-28 218.2 23.8 323 126-493 39-414 (418)
63 3dyd_A Tyrosine aminotransfera 99.9 5.6E-24 1.9E-28 217.9 24.7 340 102-494 72-425 (427)
64 1d2f_A MALY protein; aminotran 99.9 1.4E-23 4.7E-28 212.2 27.1 332 103-493 43-389 (390)
65 1fc4_A 2-amino-3-ketobutyrate 99.9 3.1E-23 1.1E-27 210.4 29.3 303 129-494 90-398 (401)
66 3e77_A Phosphoserine aminotran 99.9 2.1E-24 7.3E-29 215.2 19.8 310 123-492 52-374 (377)
67 2zc0_A Alanine glyoxylate tran 99.9 2E-23 7E-28 212.1 27.4 337 102-495 50-406 (407)
68 3piu_A 1-aminocyclopropane-1-c 99.9 2.1E-23 7.3E-28 214.1 27.6 324 121-494 82-433 (435)
69 3g0t_A Putative aminotransfera 99.9 1.3E-23 4.3E-28 215.7 25.6 343 105-492 61-436 (437)
70 3a9z_A Selenocysteine lyase; P 99.9 1.7E-23 5.7E-28 214.6 26.0 358 89-495 18-430 (432)
71 3ke3_A Putative serine-pyruvat 99.9 1.1E-23 3.8E-28 212.3 24.2 318 124-494 30-377 (379)
72 1u08_A Hypothetical aminotrans 99.9 1E-23 3.5E-28 212.9 23.8 326 104-488 46-385 (386)
73 3h14_A Aminotransferase, class 99.9 6.2E-23 2.1E-27 207.5 29.5 329 104-496 47-385 (391)
74 3a2b_A Serine palmitoyltransfe 99.9 1.5E-23 5.1E-28 212.6 24.7 299 125-493 84-392 (398)
75 3dr4_A Putative perosamine syn 99.9 2.8E-24 9.5E-29 217.5 18.8 309 123-489 54-389 (391)
76 3frk_A QDTB; aminotransferase, 99.9 6.9E-25 2.4E-29 220.5 13.8 323 103-491 16-366 (373)
77 2vyc_A Biodegradative arginine 99.9 2.4E-23 8.2E-28 226.0 26.8 313 133-493 209-605 (755)
78 1iay_A ACC synthase 2, 1-amino 99.9 1.3E-22 4.5E-27 207.7 30.0 323 120-492 78-426 (428)
79 1rv3_A Serine hydroxymethyltra 99.9 3.7E-24 1.3E-28 222.4 18.7 326 121-492 82-430 (483)
80 3op7_A Aminotransferase class 99.9 2E-23 6.8E-28 209.8 23.2 312 116-495 54-373 (375)
81 3uwc_A Nucleotide-sugar aminot 99.9 6.7E-24 2.3E-28 213.1 19.0 321 106-492 21-370 (374)
82 3tcm_A Alanine aminotransferas 99.9 1.8E-22 6.2E-27 210.7 30.4 330 118-495 127-496 (500)
83 3m5u_A Phosphoserine aminotran 99.9 9.4E-24 3.2E-28 209.9 19.6 335 91-492 5-359 (361)
84 1b5p_A Protein (aspartate amin 99.9 3.1E-23 1.1E-27 209.4 23.1 325 105-490 48-382 (385)
85 2o0r_A RV0858C (N-succinyldiam 99.9 1.1E-23 3.8E-28 214.5 19.9 334 104-493 41-396 (411)
86 3ele_A Amino transferase; RER0 99.9 5.8E-23 2E-27 208.1 25.0 327 104-493 51-396 (398)
87 3aow_A Putative uncharacterize 99.9 3.9E-22 1.3E-26 205.4 31.5 336 103-495 93-447 (448)
88 1v2d_A Glutamine aminotransfer 99.9 1.8E-23 6.1E-28 210.7 21.0 318 104-494 41-372 (381)
89 1vp4_A Aminotransferase, putat 99.9 9E-23 3.1E-27 208.8 26.2 337 103-496 60-421 (425)
90 2oga_A Transaminase; PLP-depen 99.9 1.6E-23 5.3E-28 212.6 20.3 324 105-493 45-396 (399)
91 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.1E-24 3.6E-29 224.2 11.8 291 129-493 57-353 (446)
92 1bw0_A TAT, protein (tyrosine 99.9 1E-22 3.6E-27 207.6 26.5 341 104-495 53-415 (416)
93 3ffh_A Histidinol-phosphate am 99.9 3.3E-22 1.1E-26 200.0 29.6 308 104-489 48-362 (363)
94 1yiz_A Kynurenine aminotransfe 99.9 5.5E-23 1.9E-27 210.6 23.1 339 104-490 53-426 (429)
95 3euc_A Histidinol-phosphate am 99.9 8.7E-23 3E-27 204.5 23.9 284 134-490 72-365 (367)
96 2z61_A Probable aspartate amin 99.9 7.1E-23 2.4E-27 205.5 23.2 316 104-491 45-369 (370)
97 3ly1_A Putative histidinol-pho 99.9 3.5E-22 1.2E-26 199.0 27.7 292 132-492 54-351 (354)
98 3cq5_A Histidinol-phosphate am 99.9 1.1E-21 3.8E-26 196.8 31.1 293 127-490 71-365 (369)
99 2fyf_A PSAT, phosphoserine ami 99.9 4E-23 1.4E-27 209.6 20.5 341 90-492 39-397 (398)
100 3get_A Histidinol-phosphate am 99.9 2.8E-22 9.5E-27 200.7 26.4 309 104-490 46-364 (365)
101 3fdb_A Beta C-S lyase, putativ 99.9 1.2E-22 4.2E-27 204.0 23.6 323 105-492 40-375 (377)
102 3ftb_A Histidinol-phosphate am 99.9 7.4E-22 2.5E-26 197.2 29.1 291 125-492 61-360 (361)
103 3kki_A CAI-1 autoinducer synth 99.9 5E-22 1.7E-26 202.2 28.1 290 129-492 104-403 (409)
104 2dkj_A Serine hydroxymethyltra 99.9 2.2E-23 7.7E-28 211.7 18.1 307 125-492 65-387 (407)
105 2x5d_A Probable aminotransfera 99.9 1.4E-22 4.6E-27 206.5 23.8 335 104-495 53-400 (412)
106 1mdo_A ARNB aminotransferase; 99.9 1.3E-22 4.4E-27 205.2 23.3 330 107-493 23-386 (393)
107 1bs0_A Protein (8-amino-7-oxon 99.9 1.8E-22 6E-27 203.6 24.2 291 129-489 84-383 (384)
108 2zyj_A Alpha-aminodipate amino 99.9 1.5E-22 5.2E-27 205.1 23.5 325 103-495 49-395 (397)
109 1c4k_A Protein (ornithine deca 99.9 2.9E-22 9.8E-27 215.6 26.1 323 133-494 177-567 (730)
110 2cb1_A O-acetyl homoserine sul 99.9 1E-21 3.4E-26 200.2 27.4 300 130-488 57-411 (412)
111 3fvs_A Kynurenine--oxoglutarat 99.9 1.8E-22 6.2E-27 206.1 21.6 339 104-492 44-421 (422)
112 1o69_A Aminotransferase; struc 99.9 4.7E-22 1.6E-26 201.4 24.5 316 124-491 31-385 (394)
113 2dou_A Probable N-succinyldiam 99.9 6.9E-22 2.4E-26 198.7 25.4 323 104-489 41-374 (376)
114 3qm2_A Phosphoserine aminotran 99.9 2.2E-23 7.5E-28 209.1 14.0 336 95-492 31-384 (386)
115 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2E-21 6.8E-26 196.4 28.5 337 100-486 11-389 (390)
116 3nyt_A Aminotransferase WBPE; 99.9 3.3E-23 1.1E-27 207.8 15.1 318 104-489 16-360 (367)
117 2bwn_A 5-aminolevulinate synth 99.9 1.1E-21 3.8E-26 199.0 26.3 299 131-492 93-399 (401)
118 3b46_A Aminotransferase BNA3; 99.9 6.3E-23 2.1E-27 211.4 17.2 338 102-489 71-443 (447)
119 2vi8_A Serine hydroxymethyltra 99.9 3.5E-22 1.2E-26 202.7 22.5 311 123-494 63-388 (405)
120 2po3_A 4-dehydrase; external a 99.9 3.3E-21 1.1E-25 197.1 29.5 327 103-493 31-386 (424)
121 2o1b_A Aminotransferase, class 99.9 3.2E-22 1.1E-26 203.3 21.8 326 105-492 64-402 (404)
122 2a7v_A Serine hydroxymethyltra 99.9 6.1E-22 2.1E-26 204.2 23.3 316 123-492 94-440 (490)
123 3ihj_A Alanine aminotransferas 99.9 2.8E-21 9.5E-26 201.4 27.9 334 118-495 122-495 (498)
124 2rfv_A Methionine gamma-lyase; 99.9 6.5E-22 2.2E-26 200.6 22.5 287 128-489 63-396 (398)
125 3ju7_A Putative PLP-dependent 99.9 1.3E-21 4.6E-26 196.7 23.1 311 124-492 35-374 (377)
126 1gc0_A Methionine gamma-lyase; 99.9 1.1E-21 3.9E-26 198.8 22.7 286 123-489 63-397 (398)
127 1lc5_A COBD, L-threonine-O-3-p 99.9 4.4E-21 1.5E-25 192.0 26.7 312 105-493 41-360 (364)
128 1e5e_A MGL, methionine gamma-l 99.9 3.7E-21 1.3E-25 195.4 26.4 282 133-496 66-398 (404)
129 3ezs_A Aminotransferase ASPB; 99.9 4.3E-21 1.5E-25 192.8 26.5 317 103-491 38-373 (376)
130 2c0r_A PSAT, phosphoserine ami 99.9 9.5E-22 3.3E-26 196.6 21.4 306 124-493 44-361 (362)
131 1jg8_A L-ALLO-threonine aldola 99.9 3.4E-22 1.2E-26 198.6 17.6 304 120-493 33-346 (347)
132 3n0l_A Serine hydroxymethyltra 99.9 2.1E-21 7.1E-26 197.8 23.8 311 122-492 64-388 (417)
133 3lws_A Aromatic amino acid bet 99.9 1.4E-21 4.9E-26 194.9 21.8 331 89-489 11-355 (357)
134 3qhx_A Cystathionine gamma-syn 99.9 2.5E-21 8.5E-26 195.8 23.7 285 123-486 64-391 (392)
135 1w23_A Phosphoserine aminotran 99.9 2E-22 7E-27 201.1 13.8 333 98-492 10-359 (360)
136 1ax4_A Tryptophanase; tryptoph 99.9 4.7E-21 1.6E-25 198.4 23.9 357 91-493 44-441 (467)
137 3jtx_A Aminotransferase; NP_28 99.9 8.9E-21 3.1E-25 191.8 25.3 321 104-489 46-394 (396)
138 3e2y_A Kynurenine-oxoglutarate 99.9 1.4E-21 4.8E-26 198.7 19.4 336 103-488 38-408 (410)
139 3hdo_A Histidinol-phosphate am 99.9 5.8E-21 2E-25 190.8 23.4 307 105-492 43-354 (360)
140 2x5f_A Aspartate_tyrosine_phen 99.9 8.3E-21 2.8E-25 194.4 25.0 314 119-493 82-429 (430)
141 3p1t_A Putative histidinol-pho 99.9 3E-20 1E-24 183.7 28.1 300 105-490 33-334 (337)
142 2ez2_A Beta-tyrosinase, tyrosi 99.9 3.5E-20 1.2E-24 191.3 29.6 320 120-494 70-432 (456)
143 3gbx_A Serine hydroxymethyltra 99.9 1.4E-21 4.9E-26 199.1 18.6 308 126-492 73-395 (420)
144 1cs1_A CGS, protein (cystathio 99.9 2.9E-20 9.8E-25 187.7 27.6 283 124-489 51-383 (386)
145 1fg7_A Histidinol phosphate am 99.9 1.9E-20 6.7E-25 186.8 26.0 284 127-488 60-353 (356)
146 3pj0_A LMO0305 protein; struct 99.9 1.5E-20 5E-25 187.6 24.3 301 121-489 44-358 (359)
147 1qgn_A Protein (cystathionine 99.9 1.1E-20 3.6E-25 193.4 23.1 282 132-492 117-444 (445)
148 3ri6_A O-acetylhomoserine sulf 99.9 3.5E-21 1.2E-25 196.4 19.5 257 123-447 80-368 (430)
149 3ecd_A Serine hydroxymethyltra 99.9 1.5E-20 5E-25 191.9 23.3 307 128-493 77-397 (425)
150 3qgu_A LL-diaminopimelate amin 99.9 6.1E-20 2.1E-24 189.0 27.8 307 119-492 105-439 (449)
151 3rq1_A Aminotransferase class 99.9 1.6E-20 5.5E-25 191.5 23.0 333 102-494 57-416 (418)
152 2oqx_A Tryptophanase; lyase, p 99.9 2.2E-20 7.4E-25 193.4 24.2 353 91-494 42-443 (467)
153 3fsl_A Aromatic-amino-acid ami 99.9 1E-20 3.5E-25 191.5 20.8 358 70-489 14-396 (397)
154 3if2_A Aminotransferase; YP_26 99.9 2.2E-20 7.7E-25 192.0 23.4 322 119-496 77-443 (444)
155 2r2n_A Kynurenine/alpha-aminoa 99.9 9.4E-20 3.2E-24 186.3 27.6 324 121-493 74-424 (425)
156 1pff_A Methionine gamma-lyase; 99.9 1E-20 3.6E-25 186.7 18.9 277 134-489 3-330 (331)
157 1vef_A Acetylornithine/acetyl- 99.9 1E-19 3.5E-24 184.1 26.1 293 129-490 87-394 (395)
158 3b1d_A Betac-S lyase; HET: PLP 99.8 3.9E-23 1.3E-27 209.2 0.0 327 106-491 49-391 (392)
159 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 5.7E-20 1.9E-24 188.7 23.3 326 121-490 58-433 (437)
160 3acz_A Methionine gamma-lyase; 99.8 1.1E-19 3.8E-24 183.6 24.0 217 124-410 58-280 (389)
161 3t18_A Aminotransferase class 99.8 8.4E-20 2.9E-24 185.9 23.0 347 83-494 38-411 (413)
162 3ei9_A LL-diaminopimelate amin 99.8 2.3E-19 8E-24 183.7 26.1 308 120-492 93-427 (432)
163 4f4e_A Aromatic-amino-acid ami 99.8 1.4E-20 4.9E-25 192.1 16.8 360 69-490 36-419 (420)
164 3fkd_A L-threonine-O-3-phospha 99.8 3.2E-19 1.1E-23 177.3 26.0 280 133-491 54-340 (350)
165 2fq6_A Cystathionine beta-lyas 99.8 5.5E-20 1.9E-24 186.9 20.7 287 123-488 80-413 (415)
166 3h7f_A Serine hydroxymethyltra 99.8 1.4E-19 4.8E-24 186.3 23.5 308 124-492 86-413 (447)
167 3ruy_A Ornithine aminotransfer 99.8 2.7E-19 9.3E-24 180.8 25.1 295 129-490 78-391 (392)
168 3ndn_A O-succinylhomoserine su 99.8 9.9E-20 3.4E-24 185.1 21.2 249 131-449 83-354 (414)
169 2ctz_A O-acetyl-L-homoserine s 99.8 7.5E-19 2.6E-23 179.3 27.6 255 123-426 56-346 (421)
170 3g7q_A Valine-pyruvate aminotr 99.8 1E-19 3.5E-24 185.3 20.9 338 104-496 49-416 (417)
171 7aat_A Aspartate aminotransfer 99.8 3.3E-19 1.1E-23 180.7 22.9 356 70-490 16-400 (401)
172 2eh6_A Acoat, acetylornithine 99.8 6.6E-19 2.3E-23 176.7 24.8 287 132-489 73-374 (375)
173 3n75_A LDC, lysine decarboxyla 99.8 5.8E-19 2E-23 188.4 25.6 239 126-414 196-456 (715)
174 3ez1_A Aminotransferase MOCR f 99.8 2.7E-19 9.4E-24 182.7 21.9 315 120-495 64-417 (423)
175 2ord_A Acoat, acetylornithine 99.8 6.2E-19 2.1E-23 178.5 24.3 295 129-492 82-396 (397)
176 1n8p_A Cystathionine gamma-lya 99.8 1.2E-19 4.1E-24 183.5 18.8 285 124-489 54-391 (393)
177 1ajs_A Aspartate aminotransfer 99.8 2.6E-19 8.9E-24 182.1 21.4 325 104-493 51-411 (412)
178 1sff_A 4-aminobutyrate aminotr 99.8 6.9E-18 2.4E-22 172.3 31.4 313 131-493 86-424 (426)
179 1yaa_A Aspartate aminotransfer 99.8 1.6E-19 5.4E-24 183.8 18.7 357 69-492 16-410 (412)
180 3cog_A Cystathionine gamma-lya 99.8 3.1E-19 1.1E-23 181.1 20.2 283 124-489 66-398 (403)
181 3ppl_A Aspartate aminotransfer 99.8 3.5E-19 1.2E-23 182.2 20.8 318 120-494 73-421 (427)
182 4adb_A Succinylornithine trans 99.8 2E-18 6.9E-23 175.1 26.0 304 129-497 81-404 (406)
183 3meb_A Aspartate aminotransfer 99.8 4.1E-18 1.4E-22 175.3 28.4 356 68-493 35-444 (448)
184 3nx3_A Acoat, acetylornithine 99.8 3.2E-18 1.1E-22 173.1 26.9 300 128-492 77-394 (395)
185 3asa_A LL-diaminopimelate amin 99.8 5.3E-19 1.8E-23 179.3 21.1 305 120-493 70-393 (400)
186 2ay1_A Aroat, aromatic amino a 99.8 4.1E-19 1.4E-23 179.5 20.0 319 104-489 47-392 (394)
187 3dxv_A Alpha-amino-epsilon-cap 99.8 1.8E-17 6.3E-22 170.0 31.7 320 125-494 82-426 (439)
188 2pb2_A Acetylornithine/succiny 99.8 2.8E-18 9.7E-23 175.0 24.5 300 128-494 98-419 (420)
189 3nmy_A Xometc, cystathionine g 99.8 2.3E-18 7.8E-23 174.2 23.4 233 123-426 65-322 (400)
190 1ibj_A CBL, cystathionine beta 99.8 1.3E-19 4.6E-24 186.6 14.5 282 130-492 134-461 (464)
191 3d6k_A Putative aminotransfera 99.8 1.8E-18 6.3E-23 176.5 22.5 316 120-495 71-420 (422)
192 3f6t_A Aspartate aminotransfer 99.8 1.3E-18 4.5E-23 182.7 21.3 363 102-495 117-527 (533)
193 2q7w_A Aspartate aminotransfer 99.8 3.1E-19 1.1E-23 180.5 15.8 320 105-489 48-395 (396)
194 1s0a_A Adenosylmethionine-8-am 99.8 4.9E-17 1.7E-21 166.3 32.3 309 131-493 88-424 (429)
195 1uu1_A Histidinol-phosphate am 99.8 9.7E-18 3.3E-22 165.7 25.0 293 104-489 35-334 (335)
196 1z7d_A Ornithine aminotransfer 99.8 2.5E-17 8.6E-22 168.7 28.5 300 128-493 106-429 (433)
197 3i4j_A Aminotransferase, class 99.8 2.7E-17 9.3E-22 168.3 28.4 330 127-494 70-429 (430)
198 2eo5_A 419AA long hypothetical 99.8 6.4E-17 2.2E-21 164.9 30.2 299 129-493 86-418 (419)
199 3i16_A Aluminum resistance pro 99.8 1.3E-17 4.5E-22 169.2 23.0 252 126-449 74-355 (427)
200 2oat_A Ornithine aminotransfer 99.8 6.3E-17 2.1E-21 166.0 28.2 297 131-492 120-438 (439)
201 3jzl_A Putative cystathionine 99.8 8.7E-18 3E-22 169.9 21.3 249 127-449 61-338 (409)
202 2aeu_A Hypothetical protein MJ 99.8 2E-18 6.8E-23 173.4 16.4 298 128-495 57-373 (374)
203 3n5m_A Adenosylmethionine-8-am 99.8 1.2E-16 4E-21 164.6 29.6 346 106-492 70-451 (452)
204 1zod_A DGD, 2,2-dialkylglycine 99.8 8.2E-17 2.8E-21 164.8 27.5 318 129-493 85-432 (433)
205 3dod_A Adenosylmethionine-8-am 99.8 4.6E-16 1.6E-20 160.0 33.2 327 127-497 85-447 (448)
206 4eu1_A Mitochondrial aspartate 99.8 3E-17 1E-21 166.8 23.5 348 70-490 29-408 (409)
207 3tfu_A Adenosylmethionine-8-am 99.8 1.3E-16 4.3E-21 164.5 27.3 317 128-495 117-455 (457)
208 3a8u_X Omega-amino acid--pyruv 99.8 3.6E-16 1.2E-20 160.9 30.7 327 128-493 92-447 (449)
209 3hmu_A Aminotransferase, class 99.8 7E-16 2.4E-20 159.5 31.5 323 128-494 98-453 (472)
210 4ffc_A 4-aminobutyrate aminotr 99.8 6.5E-16 2.2E-20 159.1 31.1 325 126-496 104-452 (453)
211 4a6r_A Omega transaminase; tra 99.8 3.8E-16 1.3E-20 161.1 28.9 325 127-494 92-450 (459)
212 3hvy_A Cystathionine beta-lyas 99.8 4E-17 1.4E-21 165.7 21.0 251 126-449 75-355 (427)
213 3gju_A Putative aminotransfera 99.8 1E-15 3.5E-20 158.0 31.6 330 127-495 93-458 (460)
214 3oks_A 4-aminobutyrate transam 99.7 9.2E-16 3.2E-20 157.9 30.4 338 106-491 82-449 (451)
215 3k28_A Glutamate-1-semialdehyd 99.7 1.6E-16 5.5E-21 162.5 24.2 310 130-493 94-427 (429)
216 3i5t_A Aminotransferase; pyrid 99.7 1.1E-15 3.9E-20 158.2 30.7 330 127-495 95-456 (476)
217 2cjg_A L-lysine-epsilon aminot 99.7 3.9E-16 1.3E-20 160.6 25.5 317 128-493 100-448 (449)
218 3l44_A Glutamate-1-semialdehyd 99.7 3.5E-16 1.2E-20 160.1 25.1 308 130-495 96-432 (434)
219 2cy8_A D-phgat, D-phenylglycin 99.7 2.9E-15 9.8E-20 154.3 29.6 329 105-496 77-438 (453)
220 3ht4_A Aluminum resistance pro 99.7 1.5E-16 5E-21 162.2 18.6 251 131-449 67-344 (431)
221 3fq8_A Glutamate-1-semialdehyd 99.7 3.8E-16 1.3E-20 159.6 21.6 309 127-492 90-426 (427)
222 1ohv_A 4-aminobutyrate aminotr 99.7 3.7E-15 1.3E-19 154.2 28.0 311 127-493 108-471 (472)
223 2epj_A Glutamate-1-semialdehyd 99.7 2.5E-15 8.4E-20 153.9 26.2 311 128-494 95-432 (434)
224 4e77_A Glutamate-1-semialdehyd 99.7 3.7E-15 1.3E-19 152.3 27.4 307 129-492 93-428 (429)
225 3k7y_A Aspartate aminotransfer 99.7 8.8E-16 3E-20 155.4 19.9 323 102-492 48-404 (405)
226 2zy4_A L-aspartate beta-decarb 99.7 5.3E-16 1.8E-20 163.0 18.0 347 120-494 133-523 (546)
227 3bwn_A AT1G70560, L-tryptophan 99.7 2.6E-15 8.8E-20 151.6 21.6 294 119-492 57-386 (391)
228 2e7u_A Glutamate-1-semialdehyd 99.6 8.1E-14 2.8E-18 142.1 25.9 305 128-489 91-423 (424)
229 3ou5_A Serine hydroxymethyltra 99.6 1.8E-13 6.1E-18 135.6 25.0 317 121-491 92-439 (490)
230 4h51_A Aspartate aminotransfer 99.6 3.9E-13 1.3E-17 136.1 24.4 327 105-496 66-420 (420)
231 2hox_A ALLIIN lyase 1; cystein 99.6 1.5E-14 5E-19 147.8 13.5 306 102-490 70-422 (427)
232 4ao9_A Beta-phenylalanine amin 99.5 4.2E-12 1.4E-16 129.2 26.9 302 130-494 128-447 (454)
233 4atq_A 4-aminobutyrate transam 99.5 4.1E-10 1.4E-14 115.0 36.4 316 130-492 108-454 (456)
234 2yky_A Beta-transaminase; tran 99.1 2.2E-14 7.7E-19 146.9 0.0 304 128-494 139-461 (465)
235 4e3q_A Pyruvate transaminase; 99.3 4.9E-10 1.7E-14 114.9 28.3 328 128-496 110-471 (473)
236 4a0g_A Adenosylmethionine-8-am 99.2 8.1E-10 2.8E-14 120.8 21.8 327 133-493 428-828 (831)
237 1tks_A 3,4-dihydroxy-2-butanon 72.9 6.6 0.00022 34.4 6.0 51 230-280 143-193 (204)
238 3m0z_A Putative aldolase; MCSG 67.6 20 0.00067 31.8 7.8 74 199-285 145-221 (249)
239 4g81_D Putative hexonate dehyd 67.2 28 0.00097 31.6 9.5 69 188-264 33-104 (255)
240 3mio_A DHBP synthase, 3,4-dihy 65.4 15 0.00051 32.2 6.7 51 230-280 142-193 (206)
241 2pju_A Propionate catabolism o 62.6 42 0.0014 29.9 9.5 69 187-279 107-175 (225)
242 2q5c_A NTRC family transcripti 58.9 33 0.0011 29.8 7.9 68 188-279 96-163 (196)
243 3m6y_A 4-hydroxy-2-oxoglutarat 58.8 16 0.00055 32.7 5.7 73 200-285 169-244 (275)
244 1g57_A DHBP synthase, 3,4-dihy 57.7 22 0.00075 31.4 6.5 50 230-280 151-200 (217)
245 4fgs_A Probable dehydrogenase 57.0 41 0.0014 30.9 8.7 68 190-265 55-122 (273)
246 1snn_A DHBP synthase, 3,4-dihy 55.2 25 0.00086 31.2 6.4 51 230-281 162-212 (227)
247 3h8q_A Thioredoxin reductase 3 53.8 45 0.0015 25.7 7.3 72 187-268 17-90 (114)
248 3fkr_A L-2-keto-3-deoxyarabona 53.4 14 0.00049 34.8 5.0 63 218-282 18-83 (309)
249 3l21_A DHDPS, dihydrodipicolin 53.1 16 0.00054 34.3 5.2 61 219-281 26-89 (304)
250 1qwg_A PSL synthase;, (2R)-pho 52.8 1.2E+02 0.004 27.4 10.5 78 197-283 86-168 (251)
251 3dz1_A Dihydrodipicolinate syn 52.0 16 0.00055 34.5 5.1 61 219-281 19-81 (313)
252 2wkj_A N-acetylneuraminate lya 50.7 18 0.00063 33.9 5.2 61 219-281 22-85 (303)
253 3cpr_A Dihydrodipicolinate syn 50.2 20 0.00068 33.7 5.4 61 219-281 27-90 (304)
254 3flu_A DHDPS, dihydrodipicolin 50.1 17 0.00057 34.0 4.9 61 219-281 18-81 (297)
255 1f6k_A N-acetylneuraminate lya 50.1 19 0.00066 33.5 5.3 61 219-281 14-78 (293)
256 3qze_A DHDPS, dihydrodipicolin 47.7 17 0.00058 34.3 4.5 61 219-281 34-97 (314)
257 3tak_A DHDPS, dihydrodipicolin 47.5 17 0.00059 33.8 4.5 61 219-281 12-75 (291)
258 1xky_A Dihydrodipicolinate syn 47.4 20 0.00067 33.6 4.9 61 219-281 23-86 (301)
259 2r8w_A AGR_C_1641P; APC7498, d 46.9 20 0.00068 34.1 4.9 61 219-281 45-108 (332)
260 4dpp_A DHDPS 2, dihydrodipicol 46.5 23 0.00079 34.1 5.2 62 218-281 69-133 (360)
261 4gqr_A Pancreatic alpha-amylas 46.1 8.6 0.00029 38.6 2.3 31 255-285 69-99 (496)
262 2v9d_A YAGE; dihydrodipicolini 44.9 23 0.00078 33.9 5.0 62 218-281 41-105 (343)
263 3s5o_A 4-hydroxy-2-oxoglutarat 44.8 20 0.00068 33.7 4.5 61 219-281 25-88 (307)
264 3grp_A 3-oxoacyl-(acyl carrier 44.3 98 0.0034 27.9 9.2 59 198-264 61-119 (266)
265 1k4i_A 3,4-dihydroxy-2-butanon 43.6 38 0.0013 30.1 5.7 51 231-281 152-212 (233)
266 3h5d_A DHDPS, dihydrodipicolin 43.2 18 0.00062 34.1 3.9 56 226-281 23-81 (311)
267 2hmc_A AGR_L_411P, dihydrodipi 43.0 26 0.0009 33.5 5.1 56 226-281 42-97 (344)
268 3na8_A Putative dihydrodipicol 41.9 18 0.0006 34.2 3.6 61 219-281 35-98 (315)
269 3b4u_A Dihydrodipicolinate syn 41.9 21 0.00073 33.3 4.2 55 219-275 14-68 (294)
270 3si9_A DHDPS, dihydrodipicolin 41.0 18 0.00063 34.1 3.6 61 219-281 33-96 (315)
271 3rwb_A TPLDH, pyridoxal 4-dehy 40.9 98 0.0033 27.4 8.5 65 190-262 32-96 (247)
272 2ojp_A DHDPS, dihydrodipicolin 40.7 20 0.00069 33.4 3.8 61 219-281 12-75 (292)
273 1u83_A Phosphosulfolactate syn 39.7 1.9E+02 0.0066 26.3 9.9 148 88-283 35-193 (276)
274 1g94_A Alpha-amylase; beta-alp 39.6 13 0.00043 37.1 2.3 30 256-285 58-87 (448)
275 4dqx_A Probable oxidoreductase 39.1 1.2E+02 0.0041 27.4 9.0 57 198-262 61-117 (277)
276 3gvc_A Oxidoreductase, probabl 38.4 1.1E+02 0.0038 27.7 8.6 57 198-262 63-119 (277)
277 3qfe_A Putative dihydrodipicol 38.1 22 0.00074 33.7 3.6 56 226-281 27-85 (318)
278 2nuw_A 2-keto-3-deoxygluconate 38.1 19 0.00065 33.5 3.1 55 219-275 10-64 (288)
279 3e96_A Dihydrodipicolinate syn 37.6 20 0.00068 33.8 3.3 19 227-245 29-47 (316)
280 1w3i_A EDA, 2-keto-3-deoxy glu 37.6 23 0.00078 33.0 3.6 55 219-275 10-64 (293)
281 2yxg_A DHDPS, dihydrodipicolin 36.3 28 0.00097 32.3 4.1 55 227-281 17-74 (289)
282 3bh4_A Alpha-amylase; calcium, 36.1 17 0.00057 36.6 2.6 30 256-285 72-101 (483)
283 3d0c_A Dihydrodipicolinate syn 35.9 25 0.00085 33.2 3.6 56 226-281 28-86 (314)
284 1mxg_A Alpha amylase; hyperthe 35.9 17 0.00058 36.0 2.6 30 256-285 80-109 (435)
285 1ud2_A Amylase, alpha-amylase; 35.8 17 0.00058 36.5 2.6 31 256-286 74-104 (480)
286 4e6p_A Probable sorbitol dehyd 35.3 1.5E+02 0.005 26.4 8.8 58 197-262 41-98 (259)
287 1hvx_A Alpha-amylase; hydrolas 35.1 18 0.0006 36.9 2.6 30 256-285 75-104 (515)
288 1lwj_A 4-alpha-glucanotransfer 35.1 17 0.00057 36.1 2.4 30 256-285 63-92 (441)
289 1wpc_A Glucan 1,4-alpha-maltoh 34.6 18 0.00062 36.4 2.6 30 256-285 76-105 (485)
290 3m5v_A DHDPS, dihydrodipicolin 34.5 26 0.00088 32.8 3.4 56 226-281 23-82 (301)
291 1uta_A FTSN, MSGA, cell divisi 34.3 36 0.0012 24.5 3.5 48 437-489 21-69 (81)
292 1gcy_A Glucan 1,4-alpha-maltot 34.1 18 0.00061 36.9 2.4 28 257-284 87-114 (527)
293 4ibo_A Gluconate dehydrogenase 33.8 2.3E+02 0.0077 25.4 9.9 44 214-262 76-119 (271)
294 3lyl_A 3-oxoacyl-(acyl-carrier 33.6 2.2E+02 0.0075 24.8 9.6 48 207-262 51-98 (247)
295 3ctg_A Glutaredoxin-2; reduced 33.5 92 0.0031 24.6 6.2 72 187-268 37-114 (129)
296 2guy_A Alpha-amylase A; (beta- 33.3 19 0.00063 36.2 2.4 31 255-285 90-120 (478)
297 3eb2_A Putative dihydrodipicol 33.1 19 0.00066 33.7 2.3 61 219-281 15-78 (300)
298 3dhu_A Alpha-amylase; structur 33.0 19 0.00064 35.8 2.3 30 256-285 77-106 (449)
299 2ehh_A DHDPS, dihydrodipicolin 32.7 32 0.0011 32.0 3.7 56 226-281 16-74 (294)
300 3o38_A Short chain dehydrogena 32.5 1.8E+02 0.0063 25.7 9.0 45 213-262 73-117 (266)
301 1ht6_A AMY1, alpha-amylase iso 32.4 19 0.00065 35.3 2.2 30 257-286 63-92 (405)
302 4eso_A Putative oxidoreductase 32.1 1.2E+02 0.004 27.1 7.5 57 198-262 42-98 (255)
303 1zco_A 2-dehydro-3-deoxyphosph 31.6 2.8E+02 0.0095 25.0 9.9 91 191-289 112-205 (262)
304 4aie_A Glucan 1,6-alpha-glucos 31.4 20 0.0007 36.4 2.4 31 255-285 72-102 (549)
305 3l6e_A Oxidoreductase, short-c 31.0 1.1E+02 0.0037 26.9 7.0 56 199-262 38-93 (235)
306 1wza_A Alpha-amylase A; hydrol 30.8 21 0.00071 36.0 2.2 30 256-285 75-104 (488)
307 3tfo_A Putative 3-oxoacyl-(acy 30.8 1.5E+02 0.005 26.7 8.0 44 214-262 54-97 (264)
308 2dh2_A 4F2 cell-surface antige 30.5 21 0.00073 35.2 2.2 32 255-286 74-105 (424)
309 3nvt_A 3-deoxy-D-arabino-heptu 30.4 2.5E+02 0.0084 27.1 9.7 82 198-288 238-323 (385)
310 2z1k_A (NEO)pullulanase; hydro 29.9 20 0.0007 35.8 2.0 27 258-284 92-118 (475)
311 3ic4_A Glutaredoxin (GRX-1); s 29.3 1.6E+02 0.0053 21.1 7.2 74 186-271 11-89 (92)
312 1hxh_A 3BETA/17BETA-hydroxyste 29.3 2.9E+02 0.01 24.2 9.8 55 200-262 42-96 (253)
313 1x60_A Sporulation-specific N- 28.8 53 0.0018 23.4 3.6 48 437-489 21-69 (79)
314 2pcq_A Putative dihydrodipicol 28.8 15 0.00051 34.1 0.7 60 218-281 8-67 (283)
315 3h7a_A Short chain dehydrogena 28.7 2.1E+02 0.0071 25.3 8.6 43 214-262 57-99 (252)
316 2r91_A 2-keto-3-deoxy-(6-phosp 28.7 31 0.001 32.0 2.8 50 226-275 14-63 (286)
317 2aaa_A Alpha-amylase; glycosid 28.6 20 0.00068 36.0 1.7 32 254-285 89-120 (484)
318 1j0h_A Neopullulanase; beta-al 28.5 23 0.0008 36.6 2.2 31 256-286 216-246 (588)
319 1jae_A Alpha-amylase; glycosid 28.4 20 0.00069 35.9 1.7 30 256-285 68-97 (471)
320 3imf_A Short chain dehydrogena 28.4 2.7E+02 0.0092 24.6 9.3 44 214-262 56-99 (257)
321 3v2h_A D-beta-hydroxybutyrate 28.1 3.1E+02 0.011 24.6 9.8 44 214-262 77-120 (281)
322 4dyv_A Short-chain dehydrogena 27.8 1.8E+02 0.0062 26.1 8.1 52 198-257 62-113 (272)
323 3sju_A Keto reductase; short-c 27.6 1.8E+02 0.0061 26.2 8.0 44 214-262 74-117 (279)
324 1o5k_A DHDPS, dihydrodipicolin 27.4 35 0.0012 32.0 3.0 56 226-281 28-86 (306)
325 2wc7_A Alpha amylase, catalyti 27.4 23 0.00078 35.6 1.9 28 257-284 97-124 (488)
326 3op4_A 3-oxoacyl-[acyl-carrier 27.1 1.7E+02 0.0057 25.9 7.6 56 199-262 44-99 (248)
327 1m53_A Isomaltulose synthase; 26.9 26 0.00089 36.1 2.2 28 257-284 87-114 (570)
328 1vr6_A Phospho-2-dehydro-3-deo 26.7 3.5E+02 0.012 25.7 9.9 85 195-288 199-287 (350)
329 3n74_A 3-ketoacyl-(acyl-carrie 26.4 2.3E+02 0.0077 25.0 8.4 53 198-258 43-95 (261)
330 1zja_A Trehalulose synthase; s 26.3 27 0.00092 35.8 2.2 27 258-284 75-101 (557)
331 3m1a_A Putative dehydrogenase; 26.1 3.5E+02 0.012 24.0 10.8 56 199-262 40-95 (281)
332 1uok_A Oligo-1,6-glucosidase; 25.8 28 0.00096 35.7 2.2 30 256-285 72-101 (558)
333 1ua7_A Alpha-amylase; beta-alp 25.7 19 0.00066 35.4 0.9 28 258-285 70-97 (422)
334 3edf_A FSPCMD, cyclomaltodextr 25.6 30 0.001 35.9 2.4 30 256-285 192-221 (601)
335 1qho_A Alpha-amylase; glycosid 25.4 30 0.001 36.6 2.4 31 255-285 100-130 (686)
336 1d3c_A Cyclodextrin glycosyltr 25.4 30 0.001 36.6 2.4 31 255-285 108-138 (686)
337 3bc9_A AMYB, alpha amylase, ca 25.4 32 0.0011 35.7 2.6 30 256-285 202-231 (599)
338 1cyg_A Cyclodextrin glucanotra 25.3 30 0.001 36.5 2.4 31 255-285 104-134 (680)
339 1wzl_A Alpha-amylase II; pullu 25.2 25 0.00085 36.4 1.7 30 256-285 213-242 (585)
340 2ze0_A Alpha-glucosidase; TIM 25.1 29 0.001 35.6 2.2 28 257-284 73-100 (555)
341 3rih_A Short chain dehydrogena 25.0 3.6E+02 0.012 24.4 9.7 46 213-263 91-136 (293)
342 3pk0_A Short-chain dehydrogena 25.0 3.3E+02 0.011 24.1 9.3 46 213-263 60-105 (262)
343 3v8b_A Putative dehydrogenase, 25.0 2.7E+02 0.0094 25.0 8.8 39 214-257 78-116 (283)
344 3ghf_A Septum site-determining 24.9 1E+02 0.0035 24.2 4.9 49 228-280 25-78 (120)
345 3kzv_A Uncharacterized oxidore 24.9 2.5E+02 0.0087 24.7 8.5 51 199-257 39-89 (254)
346 3vup_A Beta-1,4-mannanase; TIM 24.8 58 0.002 30.0 4.1 23 261-283 88-110 (351)
347 3u5t_A 3-oxoacyl-[acyl-carrier 24.7 3.3E+02 0.011 24.2 9.3 49 206-262 73-121 (267)
348 1ea9_C Cyclomaltodextrinase; h 24.6 26 0.0009 36.2 1.7 31 256-286 212-242 (583)
349 4aef_A Neopullulanase (alpha-a 24.4 30 0.001 36.2 2.2 33 254-286 277-309 (645)
350 3v2g_A 3-oxoacyl-[acyl-carrier 24.3 3.4E+02 0.011 24.2 9.2 44 214-262 82-125 (271)
351 3tjr_A Short chain dehydrogena 24.1 2.4E+02 0.0082 25.7 8.3 44 214-262 81-124 (301)
352 3bmv_A Cyclomaltodextrin gluca 24.1 33 0.0011 36.2 2.4 30 256-285 110-139 (683)
353 1m7x_A 1,4-alpha-glucan branch 24.0 30 0.001 36.0 2.0 31 255-285 197-227 (617)
354 2bhu_A Maltooligosyltrehalose 23.8 31 0.001 35.9 2.0 32 254-285 184-215 (602)
355 1g5a_A Amylosucrase; glycosylt 23.8 35 0.0012 35.6 2.5 31 255-285 155-185 (628)
356 3a5f_A Dihydrodipicolinate syn 23.6 82 0.0028 29.1 4.8 56 225-281 17-75 (291)
357 1fov_A Glutaredoxin 3, GRX3; a 23.5 1.8E+02 0.0063 19.9 6.9 53 188-250 2-56 (82)
358 3rag_A Uncharacterized protein 23.3 77 0.0026 28.5 4.3 37 246-284 10-46 (242)
359 3aj7_A Oligo-1,6-glucosidase; 23.3 35 0.0012 35.3 2.4 31 256-286 81-111 (589)
360 3ff4_A Uncharacterized protein 23.2 1.3E+02 0.0043 23.7 5.2 47 229-285 67-113 (122)
361 2zic_A Dextran glucosidase; TI 23.2 29 0.00099 35.5 1.7 26 259-284 75-100 (543)
362 1j0a_A 1-aminocyclopropane-1-c 23.1 1.5E+02 0.0052 27.6 6.7 31 188-221 97-128 (325)
363 3czg_A Sucrose hydrolase; (alp 23.0 35 0.0012 35.8 2.3 30 256-285 149-178 (644)
364 4aee_A Alpha amylase, catalyti 22.9 34 0.0012 36.2 2.2 31 255-285 304-334 (696)
365 3vgf_A Malto-oligosyltrehalose 22.8 30 0.001 35.5 1.7 32 254-285 159-190 (558)
366 3l4n_A Monothiol glutaredoxin- 22.7 2.1E+02 0.0072 22.5 6.5 72 187-268 14-90 (127)
367 3zss_A Putative glucanohydrola 22.7 38 0.0013 35.8 2.5 31 256-286 314-344 (695)
368 3oid_A Enoyl-[acyl-carrier-pro 22.5 3.4E+02 0.012 23.9 8.8 44 214-262 55-98 (258)
369 4fn4_A Short chain dehydrogena 22.4 3.1E+02 0.011 24.5 8.4 44 206-257 52-95 (254)
370 1x1t_A D(-)-3-hydroxybutyrate 22.1 4E+02 0.014 23.4 9.2 43 214-261 56-98 (260)
371 3m07_A Putative alpha amylase; 22.0 37 0.0013 35.4 2.2 33 254-286 194-226 (618)
372 2rfg_A Dihydrodipicolinate syn 21.9 41 0.0014 31.3 2.3 48 227-274 17-64 (297)
373 4fc7_A Peroxisomal 2,4-dienoyl 21.8 2.7E+02 0.0092 24.9 8.1 47 208-262 75-121 (277)
374 3tpc_A Short chain alcohol deh 21.5 2.2E+02 0.0074 25.2 7.2 52 201-260 44-95 (257)
375 2ew8_A (S)-1-phenylethanol deh 21.2 3.9E+02 0.013 23.3 8.9 64 190-261 34-97 (249)
376 3daq_A DHDPS, dihydrodipicolin 21.1 86 0.003 29.0 4.4 55 227-281 19-76 (292)
377 2p0o_A Hypothetical protein DU 21.0 1.1E+02 0.0038 29.4 5.1 56 229-284 15-71 (372)
378 3kbq_A Protein TA0487; structu 20.9 3.5E+02 0.012 22.6 7.8 71 199-283 26-96 (172)
379 3sz8_A 2-dehydro-3-deoxyphosph 20.9 1.2E+02 0.0042 27.9 5.2 80 197-286 122-205 (285)
380 2jah_A Clavulanic acid dehydro 20.7 3.6E+02 0.012 23.5 8.5 45 214-263 57-101 (247)
381 1geg_A Acetoin reductase; SDR 20.7 3.7E+02 0.012 23.5 8.6 44 214-262 52-95 (256)
382 3k1d_A 1,4-alpha-glucan-branch 20.6 39 0.0013 35.9 2.0 31 256-286 306-336 (722)
383 2wci_A Glutaredoxin-4; redox-a 20.5 2.2E+02 0.0074 22.7 6.2 68 187-267 35-109 (135)
384 3nco_A Endoglucanase fncel5A; 20.4 2.2E+02 0.0074 26.2 7.2 44 201-247 46-98 (320)
385 1x7f_A Outer surface protein; 20.4 1.1E+02 0.0039 29.5 5.1 58 228-285 38-96 (385)
386 3bzy_B ESCU; auto cleavage pro 20.0 57 0.002 23.9 2.3 21 265-285 29-49 (83)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-74 Score=602.27 Aligned_cols=467 Identities=42% Similarity=0.818 Sum_probs=426.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccc
Q 010842 14 FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFF 93 (499)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~ 93 (499)
+.+||.++||+.+++++|.+++|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++.++|+||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (481)
T 4e1o_A 3 LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMH 82 (481)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc---CCCccEEEcCChHHHHHHHH
Q 010842 94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF---SGTGGGVIQNTTSDSILVTL 170 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~---~~~~~g~~t~ggt~A~~~al 170 (499)
+|+++++++|+++++++.+++|++...|..+|+.+++|+++++|+++++|++..++. .+.++|++|+|||+||++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al 162 (481)
T 4e1o_A 83 AYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIAL 162 (481)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876421 23457899999999999999
Q ss_pred HHHHHHHHhHhhhh-------c-cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 171 IAARDRALDAVGAE-------N-MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 171 ~~ar~~~~~~~~~~-------g-~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
+++|++...+.+.. | .++.+|++|..+|+|+.+++++.|. +++.||+++ +++||+++|+++|+++++
T Consensus 163 ~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~~ 237 (481)
T 4e1o_A 163 LAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDKQ 237 (481)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHHh
Confidence 99998876543221 1 2678999999999999999999999 999999975 469999999999999988
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+|..|++|++++|+|++|.+|||++|+++|++||+|+|||+|||++.+.+++++....|++.+||+++|+|||+++|++|
T Consensus 238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~ 317 (481)
T 4e1o_A 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC 317 (481)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce
Confidence 89999999999999999999999999999999999999999999998888888888889889999999999999999999
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
|+++++++..+.+.+...+.|+..... ....++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.
T Consensus 318 g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~ 395 (481)
T 4e1o_A 318 TGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESL 395 (481)
T ss_dssp EEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998777788888899877542 234677889999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHH
Q 010842 403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l 482 (499)
|+++|+++++.++.+++++|++.+. +..+.++.++|.++|.++++++.+.+..++|++++++.+|++||+++
T Consensus 396 L~~~~g~~~~~~~~~~~v~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~ 467 (481)
T 4e1o_A 396 VRNDPSFEIPAKRHLGLVVFRLKGP--------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRD 467 (481)
T ss_dssp HHTCTTEECCSCCCSSEEEEEESSC--------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHH
T ss_pred HhcCCCeEEecCCceeEEEEEeCCc--------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHH
Confidence 9999999998888999999999653 45678899999999988888889999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 010842 483 WELIMEGADRLFK 495 (499)
Q Consensus 483 ~~~l~~~~~~l~~ 495 (499)
+++|+++++++++
T Consensus 468 ~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 468 WNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988764
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.4e-74 Score=600.91 Aligned_cols=465 Identities=43% Similarity=0.827 Sum_probs=405.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842 17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF 96 (499)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 96 (499)
||.++||+.+++++|.+++|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++.++|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842 97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
++++.+++++++++.+.+|+|...|..+|..+++|+++++|+++++|++.+++. .+.++|++|+|||+||++|++++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875421 223579999999999999999999
Q ss_pred HHHHhHhhhh-------c-cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842 175 DRALDAVGAE-------N-MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 175 ~~~~~~~~~~-------g-~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 246 (499)
++...+.+.. | .++.+|++|..+|+|+.+++++.|+ +++.||+++ ++ ||+++|+++|+++++++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~ 234 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI 234 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence 8865542211 1 1467899999999999999999999 999999975 47 9999999999999888888
Q ss_pred cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
|++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+.+++++..+.+++++||+++|+|||+++|++||+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 99999999999999999999999999999999999999999888888888888888899999999999999999999999
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
++++..+.+.+...+.|+..... +..+++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.|+++
T Consensus 315 ~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 315 LKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp ESSGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99988776777778889876432 2345678899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
|+++++.++.+++++|++.+. +..+.++.++|.++|.++++++.+.|..++|++++++.+|++||++++++|
T Consensus 393 ~g~~l~~~~~~~iv~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i 464 (475)
T 3k40_A 393 SRFELAAEINMGLVCFRLKGS--------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEV 464 (475)
T ss_dssp TTEEESSCCBTTEEEEEESSC--------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred CCEEEecCCceEEEEEEeCCc--------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 999999888999999999753 456788999999999988899999999999999999999999999999999
Q ss_pred HHHHHHHhccC
Q 010842 487 MEGADRLFKGS 497 (499)
Q Consensus 487 ~~~~~~l~~~~ 497 (499)
+++++++.+++
T Consensus 465 ~~~~~~~~~~~ 475 (475)
T 3k40_A 465 SAAADEMEQEQ 475 (475)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHhccC
Confidence 99999988764
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1.1e-68 Score=561.37 Aligned_cols=475 Identities=23% Similarity=0.376 Sum_probs=418.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHHhc---CCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q 010842 12 VQFKPLDAQEFRKQAHQMVDFIADYYQNIESY--PVLTQVEPGFLRSA---LPDSAPHRPESFETILKDVQEKIIPGITH 86 (499)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~~~~ 86 (499)
..+...+.+++++++++++|.+++|+++..++ +|.+..+|++++.. ++.++|++|.+++++++++.+.+.++ .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~ 92 (511)
T 3vp6_A 14 LLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VR 92 (511)
T ss_dssp STTSTTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CC
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CC
Confidence 44555789999999999999999999998665 46788899999999 88999999999999999999988766 46
Q ss_pred CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
++||+|+||+|+++.+++++++++.+++|++...|..+|+.+++|+++++|+++++|++... ++|++|+|||+||
T Consensus 93 ~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~ 167 (511)
T 3vp6_A 93 TGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISN 167 (511)
T ss_dssp TTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHH
T ss_pred CCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHH
Confidence 79999999999999999999999999999999999999999999999999999999998531 3689999999999
Q ss_pred HHHHHHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc
Q 010842 167 LVTLIAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA 243 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 243 (499)
++|+.+++++..++..++| .++.+|++|..+|+|+.++++++|+|..+++.||++.+ ++||+++|+++|+++.++
T Consensus 168 ~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~ 245 (511)
T 3vp6_A 168 MYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQK 245 (511)
T ss_dssp HHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhc
Confidence 9999999987544333334 36789999999999999999999998888999999854 699999999999999888
Q ss_pred CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842 244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC 323 (499)
Q Consensus 244 g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g 323 (499)
|..|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.|++++||+++|+|||+++|.+||
T Consensus 246 g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g 325 (511)
T 3vp6_A 246 GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCS 325 (511)
T ss_dssp TCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCE
T ss_pred CCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeE
Confidence 99999999999999999999999999999999999999999999999899888888888899999999999999999999
Q ss_pred EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010842 324 CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV 403 (499)
Q Consensus 324 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L 403 (499)
+++++++..+...+...+.|+...........++.+++++++|+++++++|++++.+|.+|+++++++..++++++++.|
T Consensus 326 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L 405 (511)
T 3vp6_A 326 AILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKI 405 (511)
T ss_dssp EEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988777778889999987654444556778899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEc--CCCceEEEEEecCCCCCC---c----chhHHHHHHHHHHHHhcCCEEEEeeeECC-EEEEEEeccCCC
Q 010842 404 KSDPRFEIVV--PRHFALVCFRLNPYPHSG---S----ADTEMLNRKLLDWVNSTGRVYLTHTIVGG-LYMLRFAVGASL 473 (499)
Q Consensus 404 ~~~~~~~~~~--~~~~~~v~f~~~~~~~~~---~----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lRi~~~~~~ 473 (499)
++.|+++++. +|.+++++|++.|..... . ...+..+.++.++|.++|.+++..+...+ ..++|++++|+.
T Consensus 406 ~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~ 485 (511)
T 3vp6_A 406 KNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPA 485 (511)
T ss_dssp HSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTT
T ss_pred hcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCC
Confidence 9999999997 688999999987643100 0 12344567899999999988777666555 468999998999
Q ss_pred CcHHHHHHHHHHHHHHHHHHh
Q 010842 474 TDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l~ 494 (499)
++++||+.++++|+++++.+-
T Consensus 486 ~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 486 ATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp CCHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999987653
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=5.1e-69 Score=562.25 Aligned_cols=467 Identities=46% Similarity=0.868 Sum_probs=406.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842 17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF 96 (499)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 96 (499)
||.++||+++++++|.+++|+++++++||.+..+|++++..++..+|++|.+++++++++.+.+.++..+|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842 97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
++++.+++.+++++.+++|++...|..+|..+++|+++++|+++++|++.++.. .+.++|++|+|||+||++++.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999864211 012468999999999999999998
Q ss_pred HHHHhHhhhh-c-------cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842 175 DRALDAVGAE-N-------MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 175 ~~~~~~~~~~-g-------~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 246 (499)
+...++.+.. | .++.+|+++..+|+++.++++.+|+ .++.||++. +++||+++|+++|++++++|..
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~ 235 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI 235 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence 7644321111 1 1245789999999999999999999 999999974 4699999999999999999999
Q ss_pred cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
|++|++++|+|++|.++|+++|+++|++||+|+|||+|||++.+.++++++.+.+++++|++++|+|||+++|++||+++
T Consensus 236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~ 315 (486)
T 1js3_A 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315 (486)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence 99999999999999999999999999999999999999999888788788777788889999999999999999999999
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD 406 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 406 (499)
++++..+.+.+...+.|+...........++.+++++++|+++++++|++++.+|.+++++++++..++++++.+.|++.
T Consensus 316 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 316 VKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp ESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987666677777888876432222345667788999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
|+++++.+|.+++++|++.+. +..+.++.++|.++|.++++++.+.+..++|++++++.+|++||+++++.|
T Consensus 396 ~~~~~~~~~~~~~v~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 467 (486)
T 1js3_A 396 PRFEVCAEVTLGLVCFRLKGS--------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI 467 (486)
T ss_dssp TTEEECSCCCSSEEEEEESSC--------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred CCeEEeCCCceeEEEEEecCh--------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 999998878899999998652 345688899999999888888888889999999988999999999999999
Q ss_pred HHHHHHHhcc
Q 010842 487 MEGADRLFKG 496 (499)
Q Consensus 487 ~~~~~~l~~~ 496 (499)
+++++++.++
T Consensus 468 ~~~~~~~~~~ 477 (486)
T 1js3_A 468 RGLAAELLAA 477 (486)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhh
Confidence 9998887654
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=1.1e-65 Score=539.30 Aligned_cols=477 Identities=23% Similarity=0.372 Sum_probs=409.4
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHHhc---CCCCCCCCCCCHHHHHHHHHhhhcCC
Q 010842 9 AESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESY--PVLTQVEPGFLRSA---LPDSAPHRPESFETILKDVQEKIIPG 83 (499)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~ 83 (499)
+..+-|..|+.++|++++++++|.+++|++++.++ ||.+..+|++++.. ++.++|++|.+++++++++.+.+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 87 (504)
T 2okj_A 8 ARDLLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG 87 (504)
T ss_dssp GGGSTTSTTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS
T ss_pred hccccCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhcc
Confidence 44566777999999999999999999999998764 48999999999999 89999999999999999998877655
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842 84 ITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 163 (499)
. ++.||+|++|+++++.+++++++++.+++|+|...|..+|..+++|+++++|+++++|++... +++++|+|||
T Consensus 88 ~-~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~-----~~~~~t~ggt 161 (504)
T 2okj_A 88 V-RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGA 161 (504)
T ss_dssp C-CTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHH
T ss_pred C-CCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC-----CCEEEeCCcH
Confidence 5 456999999999999999999999999999999999999999999999999999999998411 2689999999
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcc---CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENM---HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~---~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 240 (499)
+||++++.++|++..+..+..|. ++.+|++|..+|+++.++++.+|+|.++++.||+++ +++||+++|+++|+++
T Consensus 162 ea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~ 239 (504)
T 2okj_A 162 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEA 239 (504)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHH
Confidence 99999999998754332222232 255899999999999999999999876899999975 3699999999999998
Q ss_pred HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL 320 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 320 (499)
.++|..|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++|+|||+++|+
T Consensus 240 ~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~ 319 (504)
T 2okj_A 240 KQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL 319 (504)
T ss_dssp HHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS
T ss_pred HHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc
Confidence 88888899999999999999999999999999999999999999999988888877777788889999999999999999
Q ss_pred cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010842 321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFE 400 (499)
Q Consensus 321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 400 (499)
+||++++|++..+...+...++|+...........++.+++++++||++++++|++++.+|.+|+++++++..++++++.
T Consensus 320 ~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~ 399 (504)
T 2okj_A 320 QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLY 399 (504)
T ss_dssp CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999976666667778889876443222335677888999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEc--CCCceEEEEEecCCCC--C-Cc----chhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEecc
Q 010842 401 GFVKSDPRFEIVV--PRHFALVCFRLNPYPH--S-GS----ADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVG 470 (499)
Q Consensus 401 ~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~--~-~~----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~ 470 (499)
+.|+++|+++++. +|..++++|++.+... . +. ...+..+.++.++|.++|.+++.++.+.+. .++|++++
T Consensus 400 ~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~ 479 (504)
T 2okj_A 400 AKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVIS 479 (504)
T ss_dssp HHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCC
T ss_pred HHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeC
Confidence 9999999999987 5788999999865310 0 00 011224678889999999888877777765 79999998
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~~~~~~l 493 (499)
|+.+|++||++++++|+++++++
T Consensus 480 ~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 480 NPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CTTCCHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987655
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=5.4e-64 Score=527.48 Aligned_cols=468 Identities=23% Similarity=0.334 Sum_probs=395.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcc
Q 010842 15 KPLDAQEFRKQAHQMVDFIAD-YYQNIES--YPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPN 91 (499)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~ 91 (499)
.+|+.++|++++++++|.+++ |+++..+ +||.+..+|++++..++.++|++|.+++++++++.+.+.++. ++.||+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 110 (515)
T 2jis_A 32 LAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSV-KTGHPR 110 (515)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSC-CTTSTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCC-CCCCCC
Confidence 348999999999999999999 9988764 499999999999999999999999999999999988776665 456999
Q ss_pred ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI 171 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~ 171 (499)
|++|+++++.++++++++++.++|++...|..+|..+++|.++++|+++++|++.. ++++|+|||+||++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~~~al~ 183 (515)
T 2jis_A 111 FFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISNMYAVN 183 (515)
T ss_dssp EESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHHHHHHH
T ss_pred eEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHHHHHHH
Confidence 99999999999999999999989999889999999999999999999999999843 68999999999999999
Q ss_pred HHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccE
Q 010842 172 AARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPL 248 (499)
Q Consensus 172 ~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~ 248 (499)
++|++..+..+..| .++.+|+++..+|+++.++++.+|+|.++++.||++++ +++|+++|+++|+++.++|.+|.
T Consensus 184 ~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~g~~~~ 261 (515)
T 2jis_A 184 LARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADER--GKMVPEDLERQIGMAEAEGAVPF 261 (515)
T ss_dssp HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCC--CcCCHHHHHHHHHHHHhCCCCcE
Confidence 99875432111112 24568999999999999999999998778999999753 69999999999998888888899
Q ss_pred EEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842 249 FLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK 328 (499)
Q Consensus 249 ~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r 328 (499)
+|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++|+|||+++|++||++++|
T Consensus 262 ~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~ 341 (515)
T 2jis_A 262 LVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQ 341 (515)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEe
Confidence 99999999999999999999999999999999999999998888887777788888999999999999999999999999
Q ss_pred Cc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842 329 QP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP 407 (499)
Q Consensus 329 ~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 407 (499)
++ ..+.+.+...++|+.+.........++..++++++||++++++|++++.+|.+|+++++++..++++++.+.|+++|
T Consensus 342 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 421 (515)
T 2jis_A 342 DTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKRE 421 (515)
T ss_dssp CCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred ChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 98 55556677778898654332223345667788999999999999999999999999999999999999999999999
Q ss_pred CeEEEcCCCceEEEEEecCCCC-C--Ccc----hhHHHHHHHHHHHHhcCCEEEEeeeECC-EEEEEEeccCCCCcHHHH
Q 010842 408 RFEIVVPRHFALVCFRLNPYPH-S--GSA----DTEMLNRKLLDWVNSTGRVYLTHTIVGG-LYMLRFAVGASLTDERHV 479 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f~~~~~~~-~--~~~----~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lRi~~~~~~~t~~di 479 (499)
+++++.+|.++.++|++.+... . +.. ..+..+..+.+.+.++|.++++.+.+.+ ..++|++++++.+|++||
T Consensus 422 g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi 501 (515)
T 2jis_A 422 GFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADM 501 (515)
T ss_dssp TEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHH
T ss_pred CEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHH
Confidence 9999988888899998854210 0 011 1223345678889999988877766655 478999997799999999
Q ss_pred HHHHHHHHHHHHH
Q 010842 480 VAAWELIMEGADR 492 (499)
Q Consensus 480 ~~l~~~l~~~~~~ 492 (499)
++++++|++++++
T Consensus 502 d~~~~~l~~~~~~ 514 (515)
T 2jis_A 502 DFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6.5e-63 Score=517.30 Aligned_cols=462 Identities=21% Similarity=0.351 Sum_probs=391.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCCcc
Q 010842 13 QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPD-SAPHRPESFETILKDVQEKIIPGITHWLSPN 91 (499)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~ 91 (499)
.+.+++.++|++++++++|.+++|+++.+ +| ++..+|++++..++. .+|++|.+.+++++++.+.+.++.++|+||+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (497)
T 2qma_A 25 HTGELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPD 102 (497)
T ss_dssp CSSTTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 44578999999999999999999999974 45 778889999999886 5899999999999999999999999999999
Q ss_pred ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI 171 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~ 171 (499)
|++|+++++.+++++++++...+|++...|..+|..+++|+++++|+++++|++.. ..+++|+|||+||++++.
T Consensus 103 yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~------~~~~~t~ggt~a~~~al~ 176 (497)
T 2qma_A 103 CIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK------ADGIFTSGGTQSNQMGLM 176 (497)
T ss_dssp BCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT------CEEEEESSHHHHHHHHHH
T ss_pred eeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC------CCeEEcCCchHHHHHHHH
Confidence 99999999999999999999999998889999999999999999999999999753 268999999999999999
Q ss_pred HHHHHHHhH-----hhhhcc----CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 172 AARDRALDA-----VGAENM----HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 172 ~ar~~~~~~-----~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
++|++...+ ....|. ++.+|+++..+|+|+.++++.+|+|.++++.||+++ +++||+++|+++|+++.+
T Consensus 177 ~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~ 254 (497)
T 2qma_A 177 LARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKA 254 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHH
Confidence 998764421 011232 244899999999999999999999776799999975 469999999999998877
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
++.+|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++...++ ++..+.+++++|++++|+|||+++|++|
T Consensus 255 ~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~ 333 (497)
T 2qma_A 255 EGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISC 333 (497)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSC
T ss_pred CCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcce
Confidence 787888999999999999999999999999999999999999999887766 6666777878999999999999999999
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
|+++++++..+ +.+...+.|+..... ...++..++++++|+++++++|++++.+|.+++++++++..++++++.+.
T Consensus 334 G~l~~~~~~~~-~~~~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 409 (497)
T 2qma_A 334 GALLVNDKSNF-KFLLHHADYLNREHD---ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADM 409 (497)
T ss_dssp EEEEESCGGGG-GGGCC-----------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHH-HHhcCCchhcCCccc---cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988654 455556678754321 13456677889999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHH
Q 010842 403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l 482 (499)
|+++|+++++.++..++++|++.+.. ...+.++.++.+.+.++|.+++.++.+.+..++|++++++.+|++||+++
T Consensus 410 L~~~~~~~~~~~~~~~~v~f~~~~~~----~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~ 485 (497)
T 2qma_A 410 IRTNDQFELLAEPSLSTVLFRATHET----ADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESL 485 (497)
T ss_dssp HHTCTTEEECSCCSSSEEEEEECCSS----SCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHH
T ss_pred HhhCCCeEEEcCCCceEEEEEEcCCc----cCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHH
Confidence 99999999988888899999987532 12345677888999999998888888888899999997899999999999
Q ss_pred HHHHHHHHHHH
Q 010842 483 WELIMEGADRL 493 (499)
Q Consensus 483 ~~~l~~~~~~l 493 (499)
++.|+++++++
T Consensus 486 ~~~l~~~~~~~ 496 (497)
T 2qma_A 486 LSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999988764
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=4.8e-49 Score=407.48 Aligned_cols=411 Identities=15% Similarity=0.194 Sum_probs=320.4
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhh-cCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHH
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKI-IPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTE 129 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~ 129 (499)
+..++..++.++|++|++.+++++++.+++ .++..+++||+|++.. .+..+.+++..+++.+...|..+|...+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~-----~~~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTW-----DDENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCC-----CCHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCC-----chHHHHHHHHHHhccCCCChhhChhHHH
Confidence 445666777889999999999999999988 6777788999998721 1245789999999888888999999999
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC--CeEEEcCCCCchhHHHHHHH
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH--KLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~--~~~i~~s~~~H~s~~ka~~~ 207 (499)
+|+++++|+++++|++.+.. +.+.+++|+|||+||++++.+++++...+....|.+ +.+|+++. +|+++.++++.
T Consensus 82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~ 158 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY 158 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence 99999999999999976410 002479999999999999999887543322222322 35788898 99999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------CCEEEe
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------GIWVHV 281 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------~~~lhv 281 (499)
+|+ +++.||++++ +|++|+++|+++|+++ +.+|++++|+|++|.++|+++|+++|+++ |+|+||
T Consensus 159 ~G~---~v~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 159 WDV---ELREIPMRPG-QLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp TTC---EEEECCCBTT-BCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred cCc---eEEEEecCCC-CCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 999 9999999862 4799999999999653 46899999999999999999999999996 999999
Q ss_pred eccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 282 DAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 282 D~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|+||+++.. ..+..+..+ .++++|++++++|||+++|.++|+++++++..+.+.+...+.|+... +.+
T Consensus 229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 298 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGT 298 (452)
T ss_dssp ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEE
T ss_pred EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCC
Confidence 999998754 233322222 25579999999999999999999999998754434444456676431 123
Q ss_pred cccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcch
Q 010842 360 WQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 360 ~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~ 434 (499)
++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+ +.+++++|++.+.. ...
T Consensus 299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~---~~~ 375 (452)
T 2dgk_A 299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE---DPG 375 (452)
T ss_dssp CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC---CCS
T ss_pred cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc---ccc
Confidence 456778887 6789999999999999999999999999999999999999999865 67899999986521 000
Q ss_pred hHHHHHHHHHHHHhcCCE---EEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 435 TEMLNRKLLDWVNSTGRV---YLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
. ...++.++|.++|+. +..++.+.+..++|++++ ..+|++|+++++++|+++.+++.+
T Consensus 376 ~--~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~-~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 376 Y--TLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCR-RGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp C--CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 025678888888973 333444456778999997 556799999999999999887654
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=3.7e-46 Score=389.93 Aligned_cols=414 Identities=17% Similarity=0.187 Sum_probs=331.7
Q ss_pred CCCChhHHHhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccCh
Q 010842 47 TQVEPGFLRSALPD-SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASP 125 (499)
Q Consensus 47 ~~~~~~~l~~~~~~-~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p 125 (499)
+...+.+++..++. .+|+.|.+.+++++.+.+.+.. ..+|++......+..++..+.+++..+++.+...|..+|
T Consensus 16 ~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p 91 (502)
T 3hbx_A 16 STFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYP 91 (502)
T ss_dssp CTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCH
T ss_pred ccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcCh
Confidence 34467889999987 8999999999999999987743 257775432222233445678888899998888889999
Q ss_pred hhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCCchhH
Q 010842 126 ASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQTHSTF 201 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~H~s~ 201 (499)
...++|+++++|+++++|++ .+. ...|++|+|||+||++++.+++.+..++.+.+|. .++.|+++..+|+++
T Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~----~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~ 167 (502)
T 3hbx_A 92 VTTELQNRCVNMIAHLFNAPLEEAE----TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCW 167 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSC----CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCccccc----CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHH
Confidence 99999999999999999998 221 1257889999999999999988765543333332 345899999999999
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------ 275 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------ 275 (499)
.++++++|+ .++.||++++ ++++|+++|+++|+++ |.+|+++.++|++|.++|+++|+++|+++
T Consensus 168 ~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~ 237 (502)
T 3hbx_A 168 EKFARYFEV---ELKEVKLSEG-YYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGW 237 (502)
T ss_dssp HHHHHHTTC---EEEEECCBTT-BCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCc---eeEEEecCCC-cCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCC
Confidence 999999999 9999999864 3799999999998764 56899999999999999999999999999
Q ss_pred CCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 276 GIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
|+|+|||+||+++.. ..+..+..+ .+.++|++++++|||+++|.++|+++++++..+...+...+.|+....
T Consensus 238 ~~~l~VD~A~~~~~~p~~~~~~~~~~-~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~----- 311 (502)
T 3hbx_A 238 DTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ----- 311 (502)
T ss_dssp CCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE-----
T ss_pred CCeEEEECCccchhhhhhCccccccc-CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC-----
Confidence 999999999997753 244443322 256799999999999999999999999987766555666677876532
Q ss_pred cccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCC
Q 010842 354 VVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSG 431 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~ 431 (499)
..+++.++|+. .++++|++++.+|.+++++++++..+++++|.+.|+++++++++.+ +..++++|++.+..
T Consensus 312 ----~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~--- 384 (502)
T 3hbx_A 312 ----PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS--- 384 (502)
T ss_dssp ----EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS---
T ss_pred ----CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC---
Confidence 23456677776 5789999999999999999999999999999999999988999876 78999999996531
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEE---eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLT---HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~---~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.....++.++|.++|+++.. +....+..++|++++ ..+|++|++.+++.|+++.+++.+.
T Consensus 385 ----~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 385 ----CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp ----SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----cCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 00134788888899976422 333456688999995 8899999999999999998877554
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=352.45 Aligned_cols=392 Identities=14% Similarity=0.204 Sum_probs=305.2
Q ss_pred CCCCCCCCCCHHHHHHHHHhhhcC-CCCCCCCccccccCCCCC-ChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHH
Q 010842 59 PDSAPHRPESFETILKDVQEKIIP-GITHWLSPNFFAFFPATV-STAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136 (499)
Q Consensus 59 ~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~ 136 (499)
...+|++|.+.+++++++.++... +...|.+|+|+|+++.++ .....+.+.+....+.+...|..+|+..++|+++.+
T Consensus 35 ~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (497)
T 3mc6_A 35 FPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVS 114 (497)
T ss_dssp CSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHH
Confidence 357899999999999999998753 567889999999875543 344555566666555577788899999999999999
Q ss_pred HHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeE
Q 010842 137 WLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIR 216 (499)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~ 216 (499)
|+++++|++... ..+++++|||+|+.+++.++++..... .|.++.+|+++..+|.++.++++.+|+ +++
T Consensus 115 ~la~~~g~~~~~-----~~~~~~~ggt~a~~~a~~a~~~~~~~~---~g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~~ 183 (497)
T 3mc6_A 115 MVLRMFNAPSDT-----GCGTTTSGGTESLLLACLSAKMYALHH---RGITEPEIIAPVTAHAGFDKAAYYFGM---KLR 183 (497)
T ss_dssp HHHHHTTCCTTT-----CCEEEESSHHHHHHHHHHHHHHHHHHH---SCCSSCEEEEETTSCHHHHHHHHHSCC---EEE
T ss_pred HHHHHhCCCCCC-----CeEEEcCcHHHHHHHHHHHHHHHHHhc---CCCCCceEEEeCCccHHHHHHHHHcCC---eEE
Confidence 999999998211 257999999999999999998754332 244456899999999999999999999 999
Q ss_pred EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc-----
Q 010842 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI----- 291 (499)
Q Consensus 217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~----- 291 (499)
.||++++ ++++|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...
T Consensus 184 ~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~ 256 (497)
T 3mc6_A 184 HVELDPT-TYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKA 256 (497)
T ss_dssp EECBCTT-TCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTT
T ss_pred EEecCcc-cCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhh
Confidence 9999862 4699999999998653 568999999999999999999999999999999999999976542
Q ss_pred ----CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 292 ----CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 292 ----~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.|.+.. ...++|++++++|||+++|.++|+++++++......+...+.|.... +...++. +++
T Consensus 257 ~~~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-g~~ 323 (497)
T 3mc6_A 257 GYKNLPLLDF---RVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL---------YGSPTLA-GSR 323 (497)
T ss_dssp TCCSCCCCST---TSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC---------BCCSSSC-SSC
T ss_pred cccCCccccc---cCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC---------cCCcCcc-cCC
Confidence 111221 22358999999999999999999999988654322122222232221 1122333 344
Q ss_pred CC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 368 FK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 368 ~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
+. .+.+|++++.++.+++++++++..++++++.+.|++ +|+++++.++..++++|+..... ..++.+
T Consensus 324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~----------~~~l~~ 393 (497)
T 3mc6_A 324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLN----------IHELSD 393 (497)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTT----------HHHHHH
T ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCC----------HHHHHH
Confidence 44 456999999999999999999999999999999999 79999988888899999764322 467888
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.|.++|+.+... .....+|++++ .+|++|+++++++|+++.+++.+.
T Consensus 394 ~L~~~Gi~v~~~---~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 394 RLSKKGWHFNAL---QKPVALHMAFT--RLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp HHHTTTCBCEEC---CSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred HHHhCCEEEecC---CCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 888889644221 22235899985 578999999999999998877543
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=1.3e-40 Score=349.85 Aligned_cols=391 Identities=17% Similarity=0.173 Sum_probs=310.0
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCC-CCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHH
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPA-TVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWL 138 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~l 138 (499)
..+|++|.+.+++++++.+.+.++...|.+|+|+|++.. .+..+..+.+.+....+.+...+..+|...++|.++.+|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 567899999999999999988888888999999998754 4556778888888888888888889999999999999999
Q ss_pred HHHcCCCC---ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842 139 ATMLKLPK---TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI 215 (499)
Q Consensus 139 a~l~g~~~---~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v 215 (499)
++++|++. . .+|++|+|||+||..++.++++..... .|.++.+|+++..+|.++.++++.+|+ ++
T Consensus 149 a~~~g~~~~~~~------v~~~~t~ggt~a~~~al~a~~~~g~~~---~g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v 216 (514)
T 3mad_A 149 AHMLGGDAAGGT------VCGTVTSGGTESLLLAMKTYRDWARAT---KGITAPEAVVPVSAHAAFDKAAQYFGI---KL 216 (514)
T ss_dssp HHHTTGGGGTSC------CEEEEESSHHHHHHHHHHHHHHHHHHH---HCCSSCEEEEETTSCTHHHHHHHHHTC---EE
T ss_pred HHHcCCCCccCC------cceEEcCcHHHHHHHHHHHHHHHhhhh---cCCCCCeEEEeCccchHHHHHHHHcCC---ee
Confidence 99999973 3 256999999999999999998754322 234557899999999999999999999 99
Q ss_pred EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc----
Q 010842 216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI---- 291 (499)
Q Consensus 216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~---- 291 (499)
+.||+++ ++++|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++...
T Consensus 217 ~~v~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~ 288 (514)
T 3mad_A 217 VRTPLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER 288 (514)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHH
T ss_pred EEeeeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHh
Confidence 9999986 4699999999998653 458999999999999999999999999999999999999987542
Q ss_pred ----CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842 292 ----CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR 367 (499)
Q Consensus 292 ----~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 367 (499)
.+.+.. ...++|++++++|||+++|.++|+++++++......+.....|..+ .+...++.+++.
T Consensus 289 ~g~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~gs~~ 356 (514)
T 3mad_A 289 LGYPVPPFDF---RLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG---------LYFSPTFAGSRP 356 (514)
T ss_dssp TTCCCCCCST---TSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC---------SEEESSSCSSCC
T ss_pred cCCCCCcccc---cCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC---------cccCCccCCCCc
Confidence 111111 2335899999999999999999999999875432111111122111 111223344444
Q ss_pred CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 368 FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 368 ~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
.. .+++|++++.++.+++++++++..++++++.+.|+++|+++++.++. ++++|...... ..++.++|
T Consensus 357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~~~~----------~~~l~~~L 425 (514)
T 3mad_A 357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPL-WVIAVASDELN----------IYQVMEEM 425 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCS-SEEEEECSSSC----------HHHHHHHH
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCe-EEEEEeCCCCC----------HHHHHHHH
Confidence 43 57899999999999999999999999999999999999999886654 56777653322 45678888
Q ss_pred HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
.++|+.+ .+. ....++|++++++.+++++|++++++|+++.+++.+.
T Consensus 426 ~~~Gi~v-~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 426 AGRGWRL-NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp HTTTCBC-EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCEe-ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 8889654 322 2234699999878888899999999999999887644
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=4e-39 Score=324.74 Aligned_cols=380 Identities=13% Similarity=0.094 Sum_probs=269.8
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCC-----------------CCccccccCCCCCChHHHHHHHHHHHcccCCcccc
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHW-----------------LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL 122 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~-----------------~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 122 (499)
..+|++|.+.++|...|.++-..+..+| ..||||||+++. +..+|++.. |. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 4689999999999998887654444444 247999999886 455677776 33 788
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
.+|+...+|+++..|+.+++|+|..+ ++++++|+| +++.++|.++|.... ++..|++++.+|.|+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~~--------~~~~viv~r~aHkSv 157 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKRP--------KAKYIIWPRIDQKSC 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT--------TCCEEEEECCCCHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhhc--------CCCEEEEECCcHHHH
Confidence 89999999999999999999999874 568999998 888888888887421 234567778899999
Q ss_pred HHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 202 AKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.|++.++|+ .++.|+... +..+.||+++|+++|+++.. ..+++|+.+.+++.+|++|||++|+++|++||+|+|
T Consensus 158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~ 232 (450)
T 3bc8_A 158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV 232 (450)
T ss_dssp HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence 999999999 666665421 12479999999999988642 246778888777778899999999999999999999
Q ss_pred eeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 281 VDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
||+|||+...+.++... .++ ++||+++.|+|||+.+|++++++++|+++.+.+.. ..|....
T Consensus 233 VD~A~G~~~~~~~~l~~--~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~----------- 296 (450)
T 3bc8_A 233 VNNAYGLQSSKCMHLIQ--QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRA----------- 296 (450)
T ss_dssp EECTTTTTCHHHHHHHH--HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCB-----------
T ss_pred EECCCchhhhhhHhHHH--HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCC-----------
Confidence 99999986543322111 222 57999999999999999999999999887664432 2233111
Q ss_pred CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCce-EEEEEecCCCCCCcch
Q 010842 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFA-LVCFRLNPYPHSGSAD 434 (499)
Q Consensus 359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~-~v~f~~~~~~~~~~~~ 434 (499)
.+ ..++.+|++++.+|.+++++.+++..++++++++.|++++ +++++..+..+ ..++.+.... ...+
T Consensus 297 -----s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~~~ 367 (450)
T 3bc8_A 297 -----SA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID--GHHD 367 (450)
T ss_dssp -----CS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTS--SSSS
T ss_pred -----cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccc--cccc
Confidence 00 1259999999999999999999999999999999999988 88887644322 2233232110 0000
Q ss_pred hHHHHHHHHHHHHhc---CCEEEEe--------ee---------ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 435 TEMLNRKLLDWVNST---GRVYLTH--------TI---------VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~---g~~~~~~--------~~---------~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+ ..+|.-.+... |.-+..+ .. .....++=+.+ ....+++|+++++++|+++.+++.
T Consensus 368 ~D--~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~-sig~~~~di~~l~~~L~~~~~~~~ 444 (450)
T 3bc8_A 368 KA--VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA-AIGMKMQDVDLFIKRLDKCLNIVR 444 (450)
T ss_dssp CH--HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CC--CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 22333333333 3322200 00 11223454454 478999999999999999877664
Q ss_pred c
Q 010842 495 K 495 (499)
Q Consensus 495 ~ 495 (499)
+
T Consensus 445 ~ 445 (450)
T 3bc8_A 445 K 445 (450)
T ss_dssp H
T ss_pred h
Confidence 4
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.9e-35 Score=299.23 Aligned_cols=382 Identities=17% Similarity=0.169 Sum_probs=290.9
Q ss_pred CCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHH
Q 010842 61 SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLAT 140 (499)
Q Consensus 61 ~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~ 140 (499)
.+|+.|.+.+++++.+.+.. +....+.+|+|+|+.++++.+ . +.+.+...+..+...+...|...+++.++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57899999999999999865 555667899999999765543 3 45666666665444455567889999999999999
Q ss_pred HcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe
Q 010842 141 MLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL 218 (499)
Q Consensus 141 l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v 218 (499)
++|.+.+ .+++|+|||+|+..++.+++....... +..+.++..|+++..+|+++.++++..|+ +++.|
T Consensus 81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v 150 (397)
T 3f9t_A 81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA 150 (397)
T ss_dssp HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence 9999765 469999999999999998876422110 00111467899999999999999999999 99999
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccch--
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR-- 296 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~-- 296 (499)
|++++ +.+|+++|++++++. .+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+++.+......
T Consensus 151 ~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 151 PIKED--YTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp CBCTT--SSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred eeCCC--CcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 99864 699999999999872 134788899999999999999999999999999999999987654211100
Q ss_pred ------hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-C
Q 010842 297 ------HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-K 369 (499)
Q Consensus 297 ------~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~ 369 (499)
...... .+|++++++||+++.|.++|+++++++... +.+....+|+.... .....+++.. .
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 291 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR----------QATILGTRVGFG 291 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE----------ECSSCSSCCSHH
T ss_pred cccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC----------ccccccccccch
Confidence 000112 589999999999999999999999887543 33333344544321 0112233332 4
Q ss_pred cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
.+.+|+++..++..+++++.++..++++++.+.|++. +++++.++..++++|.... ..++.+.|.++
T Consensus 292 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~ 358 (397)
T 3f9t_A 292 GACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED------------YKEVCKKLRDR 358 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT------------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC------------HHHHHHHHHhC
Confidence 5788889998888999999999999999999999998 8887777888888887643 35677888888
Q ss_pred CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 450 GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 450 g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
|+.+ .+.. ...++|+++. ..+|++|+++++++|+++.+
T Consensus 359 gi~v-~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 359 GIYV-SVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp TCBC-EECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred CeEE-eccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence 8643 3322 2367999995 78899999999999988753
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=1.3e-36 Score=314.47 Aligned_cols=398 Identities=12% Similarity=0.083 Sum_probs=279.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccc
Q 010842 14 FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFF 93 (499)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~ 93 (499)
.+.+-++.|.+.+.++++...++++.+-. ...+|++|.+.+++.+.+.+....+. ..|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~-----~~yl 84 (456)
T 2z67_A 26 IEGLIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDT-----DKDP 84 (456)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBG-----GGCT
T ss_pred hhccCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhccc-----cccc
Confidence 33444688899999988877777665421 13578889998888887776543322 1233
Q ss_pred ccCCCCCChHHHHHHHHH--------------HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc
Q 010842 94 AFFPATVSTAGFLGEMLC--------------ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ 159 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~--------------~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t 159 (499)
.+...++.++.++..+.. ..+..|. .|..+|...++++++++|+++++|++.. +++|
T Consensus 85 d~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~~t 155 (456)
T 2z67_A 85 KSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNVH--------AIAT 155 (456)
T ss_dssp TCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCCE--------EEEE
T ss_pred cccccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCCC--------EEEe
Confidence 333222222222211111 1111222 4566778899999999999999999753 5999
Q ss_pred CChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHH
Q 010842 160 NTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAV 237 (499)
Q Consensus 160 ~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i 237 (499)
+||| ++|+.++.+++... ++.+|+++..+|+++.++++..|+ +++.||+.+ ++++.+|+++|+++|
T Consensus 156 ~g~te~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i 223 (456)
T 2z67_A 156 PISTGMSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAI 223 (456)
T ss_dssp SSCHHHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHH
Confidence 9999 67777888766432 234566677799999999999999 899888731 234799999999999
Q ss_pred HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc-cCccchhhhcCCCCCceeEecccccc
Q 010842 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC-ICPEFRHYLNGIERVDSFSFSPHKWL 316 (499)
Q Consensus 238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l 316 (499)
+++..++ .+++|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+ ++|++++++|||+
T Consensus 224 ~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~ 300 (456)
T 2z67_A 224 KKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNL 300 (456)
T ss_dssp HHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHH
T ss_pred HHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCc
Confidence 4332222 467788999999999999999999999999999999999987654 22332222333 5999999999999
Q ss_pred cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842 317 LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLA 396 (499)
Q Consensus 317 ~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a 396 (499)
++|.++|++++|++..+.. + .+.|..... ...++.+|+++..+|.++++++.++..+++
T Consensus 301 ~~p~g~G~l~~~~~~~~~~-l--~~~~~g~~~------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~ 359 (456)
T 2z67_A 301 LTPIGGGLVYSTDAEFIKE-I--SLSYPGRAS------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSK 359 (456)
T ss_dssp CCCSSCEEEEESCHHHHHH-H--HTTSCSCBC------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEcCHHHHhh-c--CcCCCCCCC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987654432 2 233331100 002678999999999999999999999999
Q ss_pred HHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCE--EEE-------eee--ECCE
Q 010842 397 KMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRV--YLT-------HTI--VGGL 462 (499)
Q Consensus 397 ~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~-------~~~--~~g~ 462 (499)
+++.+.|+++| ++.++ +|. ++++|++.... . ..++.++|.++|.. -+. +.. ....
T Consensus 360 ~~l~~~L~~~~~~~g~~v~-~~~-~~v~~~~~~~~------~---~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~ 428 (456)
T 2z67_A 360 KLLDELLNDLSKKTGGKFL-DVE-SPIASCISVNS------D---PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTH 428 (456)
T ss_dssp HHHHHHHHHHHHHSSCCBC-CCC-CSSEEEEECSS------C---HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSC
T ss_pred HHHHHHHHhcccccCCEec-CCC-CeEEEEEeccc------H---HHHHHHHHHHcCCCcceEEeecCccccccccccCc
Confidence 99999999886 76655 444 88888873211 0 24566667777631 111 000 1123
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 463 YMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 463 ~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.++|+++. ..+|++||++++++|+++
T Consensus 429 ~~vr~s~~-~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 429 DYIVMNAA-IGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp CEEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred chhhhhhh-cCCCHHHHHHHHHHHHHH
Confidence 67999984 889999999999999865
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=5.9e-31 Score=273.31 Aligned_cols=391 Identities=13% Similarity=0.059 Sum_probs=267.1
Q ss_pred hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc-cChhhHH
Q 010842 51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL-ASPASTE 129 (499)
Q Consensus 51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~ 129 (499)
|++++...+..+| +.+..++++++.++...+...+.+..|+| .......|.++.++.....+-+..... .+++..+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 4555555455778 78999999999998777665455667777 333344466555555442221222222 5788899
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc--cCCeEEEcCCCCchhHHHHHHH
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--MHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g--~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
++.++.+|+++++|++.. .++++|||+|+..++.+++.....+ | .++..|+++..+|.++.++++.
T Consensus 108 l~~~l~~~la~~~g~~~~--------~~~~~ggt~a~~~al~~~~~~~~~~----Gd~~~r~~Vlv~~~~h~~~~~~~~~ 175 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAI--------TLEPAAGAHGELTGILIIRAYHEDR----GEGRTRRVVLVPDSAHGSNPATASM 175 (474)
T ss_dssp HHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHHHHHHHT----TCTTTCCEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCce--------eecChHHHHHHHHHHHHHHHHHHhc----CCccCCCEEEEeCCcChhhHHHHHH
Confidence 999999999999999754 3688999999999998887543221 2 1344788899999999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeecccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.|+ +++.||++++ +.+|+++|+++|++++ .+|+++.+ |++|.+ +|+++|+++|++||+|+|+|++|+
T Consensus 176 ~G~---~vv~v~~~~~--~~~d~~~L~~~i~~~t------~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~ 243 (474)
T 1wyu_B 176 AGY---QVREIPSGPE--GEVDLEALKRELGPHV------AALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANL 243 (474)
T ss_dssp TTC---EEEEECBCTT--SSBCHHHHHHHCSTTE------EEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGG
T ss_pred CCC---EEEEecCCCC--CCcCHHHHHHhhCCCc------eEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchh
Confidence 999 9999999754 6999999999986543 36777777 469999 899999999999999999999997
Q ss_pred chhccCccchhhhcCCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC----
Q 010842 287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF---- 357 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~---- 357 (499)
.+... ..+.... ++|++++++||+++.|. ++|+++++++. . +.+.. .++...... ...++
T Consensus 244 ~~~~g--~~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l-~-~~l~~--~~~~~~g~~--~~~~~~~~~ 312 (474)
T 1wyu_B 244 NAIMG--WARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL-A-PYLPV--PLVERGEEG--FYLDFDRPK 312 (474)
T ss_dssp GGTTT--TCCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG-G-GGCCS--CEEEECSSC--EEEECCCTT
T ss_pred hhhcc--CCCcccC---CCcEEEEeCccccccCCCCCCCCeEEEEEcHHH-H-HhCCC--CeeeccCCe--eEecccCcc
Confidence 65431 1111111 38999999999999996 68999998752 2 22221 111000000 00000
Q ss_pred --CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCcch
Q 010842 358 --KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 358 --~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~ 434 (499)
......++........|..++.+|.+++++..++..++++++.+.|++. ++++..++ .++.+.+.+ +..
T Consensus 313 ~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~------ 384 (474)
T 1wyu_B 313 SIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEG------ 384 (474)
T ss_dssp CCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STT------
T ss_pred cCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCC------
Confidence 0000001111124566777777888999999999999999999999987 88764332 333234444 211
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
....++.++|.++|+.+ ....+. ...++|++++ ..+|++|+++++++|+++.+
T Consensus 385 --~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~-~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 385 --FRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp --CCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHCCccc-cccccccccCCEEEEEee-cCCCHHHHHHHHHHHHHHHH
Confidence 01456777888888653 221121 2467999995 77899999999999998764
No 16
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=251.43 Aligned_cols=389 Identities=12% Similarity=0.071 Sum_probs=247.7
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHH-c------ccCCcccccCh-------
Q 010842 60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCAC-F------NSVGFNWLASP------- 125 (499)
Q Consensus 60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~------n~~~~~~~~~p------- 125 (499)
..+|++|-+.+.|.-.|.++-..++.+ |.+.+--+---.-+...++... + ...+..-+.-|
T Consensus 39 r~~P~~g~~d~~ie~~l~~la~mdsnn-----~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssl 113 (501)
T 3hl2_A 39 GKCPENGWDESTLELFLHELAIMDSNN-----FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 113 (501)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTTBGGG-----CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHH
T ss_pred CCCCccCCCHHHHHHHHHHHHhhccCC-----CcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHH
Confidence 488999999888877777765555544 3332211111111111122211 1 11111111112
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
....-|..+.+||+.+ |+|... ..++++|+|.+++..++++..+..+ .+..|++++.+|.|+.+++
T Consensus 114 l~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~rp-------g~d~VIvpRn~HKSv~kAl 179 (501)
T 3hl2_A 114 LNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHKRP-------KAKYIIWPRIDQKSCFKSM 179 (501)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT-------TCCEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCcccC-------CCCEEEEecchHHHHHHHH
Confidence 2234466778899888 999762 4688999996666665555443111 1256778999999999999
Q ss_pred HHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-CcccccCChhHHHHHHHHhCCEEEeec
Q 010842 206 KLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-TSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
.++|+ .+++|+... +..+.+|+++|+++|++. +....+++++..+ +..+.++||++|+++|++||+|+|||+
T Consensus 180 iL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDe 253 (501)
T 3hl2_A 180 ITAGF---EPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNN 253 (501)
T ss_dssp HHTTC---EEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred HHcCC---eEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeC
Confidence 99999 999887621 124799999999999986 2123334444433 334577999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
|||+...++++........++||.++.|+||++.+|.+++++++++++.+.+.. ..|....
T Consensus 254 AhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~---~~yPGr~---------------- 314 (501)
T 3hl2_A 254 AYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS---KMYPGRA---------------- 314 (501)
T ss_dssp TTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---HTSCSCB----------------
T ss_pred cchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHH---HhCCCCC----------------
Confidence 999976544332221112336999999999999999999999999987665432 2222110
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCC-ceEEEEEecCCCCCCcchhHHHH
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRH-FALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
..+.++.+|++++.+|.+||+++++++.+++++|++.|+++. +-+++..+. .-.+++.+..........+..+.
T Consensus 315 --S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~g 392 (501)
T 3hl2_A 315 --SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLG 392 (501)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHH
Confidence 123468899999999999999999999999999999999853 345554332 22344444332101112233333
Q ss_pred HHHHHHHHhcCCEEEEee--------eECC---------EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 440 RKLLDWVNSTGRVYLTHT--------IVGG---------LYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~--------~~~g---------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
..|..+-. +|-=++.++ .+.+ ..++=++.. ..++++|||.+++.|.++..++.++
T Consensus 393 s~Lf~r~v-sG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~a-iG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 393 SMLFTRQV-SGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASA-IGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp HHHHHTTC-CSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCC-CcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 33333321 121122221 1211 245666654 7789999999999999999887654
No 17
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.97 E-value=8.2e-29 Score=254.72 Aligned_cols=377 Identities=15% Similarity=0.103 Sum_probs=245.8
Q ss_pred ChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHH--HHHcccC-CcccccChh
Q 010842 50 EPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEML--CACFNSV-GFNWLASPA 126 (499)
Q Consensus 50 ~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l--~~~~n~~-~~~~~~~p~ 126 (499)
-|++++.. +.++| +|.+..++++++..+..++.. ..-.|.|.-..+...|..+.+++ ...+... ......+++
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g 105 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP--AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQG 105 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC--CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHH
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC--ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhh
Confidence 37778777 78899 889999999999887655432 01113332222223445554444 2333222 111245788
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH-
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC- 205 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~- 205 (499)
..+++.++.+++++++|.+.. .+++++|+|.++..++.+.+.. ++..|+++..+|.++..++
T Consensus 106 ~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~~~~ 168 (438)
T 1wyu_A 106 VLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRAVLR 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHHHHH
Confidence 889999999999999999754 3578999984433333332211 5668999999999987655
Q ss_pred ---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 206 ---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 206 ---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
+..|+ +++.||++ + +.+|+++ |++ .+.+|+++++ |++|.++|+++|+++|+++|+|+|||
T Consensus 169 ~~a~~~G~---~v~~v~~~-~--~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd 231 (438)
T 1wyu_A 169 AYLEAVGA---KLLTLPLE-G--GRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAV 231 (438)
T ss_dssp HHHHHTTC---EEEEECCB-T--TBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCC---EEEEEcCc-C--CccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEE
Confidence 45899 99999973 3 4888776 332 2568888998 99999999999999999999999966
Q ss_pred cc-ccchhccCccchhhhcCCCCCceeEecccc-----cccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 283 AA-YAGSACICPEFRHYLNGIERVDSFSFSPHK-----WLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 283 ~A-~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK-----~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+. ++.+.+..+ .. .++|++++++|| |+++| ++|+++++++. . +.+ +.++.+...+..+...
T Consensus 232 ~d~~a~g~~~~~--~~-----~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~-~-~~l---~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 232 ADPLSLGVLKPP--GA-----YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKAF-V-RQL---PGRLVSETVDVEGRRG 298 (438)
T ss_dssp CCTTGGGTBCCH--HH-----HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGGG-G-GGC---CSCCEEEEEBTTSCEE
T ss_pred echhhccCcCCC--cc-----CCCCEEEECCcccCCCccCCCC-CeeEEEEcHHH-H-HhC---CCceeccccccCCCcc
Confidence 43 322222222 11 148999999888 77788 89999987642 2 222 2222111000000000
Q ss_pred CC------Cc--c-cCCCCCC---Cc-HHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEE
Q 010842 357 FK------DW--Q-VGTGRRF---KS-LRL--WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALV 420 (499)
Q Consensus 357 ~~------~~--~-~~~sr~~---~a-l~~--~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v 420 (499)
+. +. . ...+... .+ ..+ ++.+..++.+|++++.++..++++++.+.|+++||++++.+ +.+..+
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 378 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEF 378 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEE
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEE
Confidence 00 00 0 0011111 11 233 33477788899999999999999999999999999998865 455666
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE-EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY-LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+|+... . ..++.++|.++|+.+ +.++.+.+..++|++++ +.+|++|+++++++|+++
T Consensus 379 ~~~~~~-~----------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 379 ALALPK-D----------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKEV 436 (438)
T ss_dssp EEECSS-C----------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred EEeCCC-C----------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHHH
Confidence 666431 1 456778888888654 12333233568999996 889999999999999875
No 18
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=2e-28 Score=249.35 Aligned_cols=359 Identities=12% Similarity=0.015 Sum_probs=249.3
Q ss_pred CCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842 86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS 165 (499)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A 165 (499)
...+|.++-+.|++..++..+.+.+...+. .. .++....+..++.+++++++|.+... ..++++|||+|
T Consensus 8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~a 76 (411)
T 3nnk_A 8 QLNPPSRLLMGPGPINADPRVLRAMSSQLI---GQ--YDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAG 76 (411)
T ss_dssp SCCCCCCEEESSSCCCCCHHHHHHHTSCCC---CT--TCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHH
T ss_pred ccCCccceeecCCCCCCCHHHHHHhhcccc---cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHH
Confidence 346888888888887776666555544221 11 24666678888999999999997642 25788899999
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc
Q 010842 166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA 243 (499)
Q Consensus 166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 243 (499)
+..++.+..+ ++..|+++..+|++ +.++++..|+ +++.+|++.+ +.+|+++|+++|++.
T Consensus 77 l~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~--- 137 (411)
T 3nnk_A 77 IEAILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPWG--EVFTPDQVEDAVKRI--- 137 (411)
T ss_dssp HHHHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH---
T ss_pred HHHHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCCC--CCCCHHHHHHHHhhC---
Confidence 9988887632 56778889999988 8889999999 9999999754 589999999999863
Q ss_pred CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842 244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC 323 (499)
Q Consensus 244 g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g 323 (499)
.+.+|++++++|++|.+.|+++|+++|++||+|+|+|++++.+....+. . . ..+|++++++|||+++|.++|
T Consensus 138 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~----~-~~~d~~~~s~~K~l~~~~g~g 209 (411)
T 3nnk_A 138 --RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-D----V-WGLDAVSAGMQKCLGGPSGTS 209 (411)
T ss_dssp --CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-T----T-TTCSEEECCSTTTTCCCSSEE
T ss_pred --CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-h----c-cCCcEEEecCccccCCCCceE
Confidence 1347889999999999999999999999999999999998765432211 1 1 148999999999998899999
Q ss_pred EEEEeCchhHHHhhcC----CccCCCCCCCC---CCCcccCCC----------cccCC-CCCC-CcHHHHHHHHHhcHHH
Q 010842 324 CLWVKQPGLLVKALST----DPEYLKNKPSE---SNSVVDFKD----------WQVGT-GRRF-KSLRLWMVLRSYGVLN 384 (499)
Q Consensus 324 ~l~~r~~~~l~~~~~~----~~~yl~~~~~~---~~~~~~~~~----------~~~~~-sr~~-~al~~~~~l~~~g~~g 384 (499)
+++++++. . +.+.. .+.|....... ......+.+ ..... +... ....+..++..+...|
T Consensus 210 ~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g 287 (411)
T 3nnk_A 210 PITLSARM-E-EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEG 287 (411)
T ss_dssp EEEECHHH-H-HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECHHH-H-HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99987643 2 22211 12222211100 000000000 00011 1111 1234555666666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC
Q 010842 385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG 460 (499)
Q Consensus 385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~ 460 (499)
++++.++..++++++.+.|++. +++++.++. .++++|.+.... ...++.+.|.++ |+.+..+....
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~~~ 357 (411)
T 3nnk_A 288 LDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI---------NGDQARKLMLEDFGIEIGTSFGPL 357 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC---------CHHHHHHHHHHHHSEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC---------CHHHHHHHHHHhcCeEEeCccCCC
Confidence 8999999999999999999987 887765432 466777764211 135677777666 75443332222
Q ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
...++|++++++.+|++||++++++|+++.+++.
T Consensus 358 ~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 358 HGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 3357999985467799999999999999987653
No 19
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.2e-27 Score=240.68 Aligned_cols=342 Identities=12% Similarity=0.103 Sum_probs=237.3
Q ss_pred ccccCCCCCChHHHHHHHHHHHccc----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNS----VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
|+++..+.+.++.++.. +...+.. ....+..+.....+..++.+++++++|.+.+ ..++|+|||+|+.
T Consensus 3 yld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~ 74 (382)
T 4hvk_A 3 YFDYTSAKPVDERILEA-MLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANN 74 (382)
T ss_dssp BCBTTTCCCCCHHHHHH-HHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHH
T ss_pred eecCCCcCCCCHHHHHH-HHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHH
Confidence 55555555555544433 3333321 1123444456678888899999999999754 3699999999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
.++.+....... ++..|+++..+|+++..++..+ |+ +++.||++++ +.+|+++|+++++++
T Consensus 75 ~~~~~~~~~~~~-------~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~---- 138 (382)
T 4hvk_A 75 LAIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKY--GEVDVSFIDQKLRDD---- 138 (382)
T ss_dssp HHHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCTT--SCBCHHHHHHHCCTT----
T ss_pred HHHHHhhhhhcC-------CCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCCC--CCcCHHHHHHHhccC----
Confidence 988876532111 5678999999999998877664 88 9999999854 599999999998653
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
+.+|+++.++|++|.+.|+++|.++|++||+ +|+|++|+.+....+. .. . .+|++++++||++ +|.|+|+
T Consensus 139 --~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~-~~--~---~~d~~~~s~~K~~-g~~g~g~ 208 (382)
T 4hvk_A 139 --TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDV-EK--I---GADMLTISSNDIY-GPKGVGA 208 (382)
T ss_dssp --EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCH-HH--H---TCSEEEEESGGGT-SCTTCEE
T ss_pred --ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCc-hh--c---CCCEEEEeHHHhc-CCCceEE
Confidence 3589999999999999999999999999999 9999998765432221 10 1 3799999999975 4778999
Q ss_pred EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
++++++..+ ..++..... ......+.. . ....+..++.. ..++++++.++..++++++.+.
T Consensus 209 ~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 209 LWIRKEAKL-------QPVILGGGQ---------ENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp EEEETTCCC-------CCSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCccCc-------CcccccCCC---------cCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH
Confidence 999875311 112211100 000111111 0 11223333332 3468889999999999999999
Q ss_pred HhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-------------C-----
Q 010842 403 VKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-------------G----- 461 (499)
Q Consensus 403 L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------g----- 461 (499)
|+++|++++..++. .++++|.+.... ..++.+.|.++|+.+..+..+. +
T Consensus 272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~ 341 (382)
T 4hvk_A 272 VLKIEESYLNGHPEKRLPNNVNVRFSYIE----------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEE 341 (382)
T ss_dssp HTTSTTEEECSCSSSBCTTEEEEEETTCC----------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHH
T ss_pred HhcCCCeEEeCCccccCCCEEEEEECCCC----------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhh
Confidence 99999999875432 357788775432 3567777877886543322111 0
Q ss_pred -EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 462 -LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 462 -~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
..++|+++. +.+|++|+++++++|+++.+++.+
T Consensus 342 ~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 342 AHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 468999995 788999999999999999887754
No 20
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=4.6e-28 Score=247.03 Aligned_cols=357 Identities=12% Similarity=0.063 Sum_probs=240.8
Q ss_pred CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
..+|+++.+.|++...+..+.+.+.. ... ...++....+..++.+++++++|.+.+. ..++++|||+|+
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~---~~~--~~~~~~~~~~~~~l~~~la~~~g~~~~~------~~~~~~s~t~al 75 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMST---PVV--GQFDPAFTGIMNETMEMLRELFQTKNRW------AYPIDGTSRAGI 75 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTS---CCC--CTTSHHHHHHHHHHHHHHHHHTTCCCSE------EEEEESCHHHHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhcc---cCC--CCccHHHHHHHHHHHHHHHHHhCCCCCc------EEEecCcHHHHH
Confidence 44677777777776666555444433 111 1223556788889999999999987652 124789999999
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
..++.+... ++..|+++..+|++ +.++++..|+ +++.+|++.++ .+|+++|+++|++..
T Consensus 76 ~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~--~~d~~~l~~~i~~~~--- 136 (416)
T 3isl_A 76 EAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEWGT--VFDPEDIIREIKKVK--- 136 (416)
T ss_dssp HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCHHHHHHHHHHHC---
T ss_pred HHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCCCC--CCCHHHHHHHHhhCC---
Confidence 888776521 56678888899998 8888999999 99999998654 899999999998431
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
+.+|++++++|++|.+.|+++|+++|++||+++|+|++|+.+....+. .. ..+|++++++|||+++|.++|+
T Consensus 137 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~-~~~d~~~~s~~K~l~g~~g~g~ 208 (416)
T 3isl_A 137 --PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-----DE-WKIDAAIGGTQKCLSVPSGMAP 208 (416)
T ss_dssp --CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-----TT-TTCSEEECCSSSTTCCCSSEEE
T ss_pred --CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-----hh-cCCCEEEecCccccCCCCCeEE
Confidence 348899999999999999999999999999999999998755432211 01 1389999999999998999999
Q ss_pred EEEeCchhHHHhhcCC----ccC--------CCCCCCCCCCcccC-------CCcccCC-CCCC-CcHHHHHHHHHhcHH
Q 010842 325 LWVKQPGLLVKALSTD----PEY--------LKNKPSESNSVVDF-------KDWQVGT-GRRF-KSLRLWMVLRSYGVL 383 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~----~~y--------l~~~~~~~~~~~~~-------~~~~~~~-sr~~-~al~~~~~l~~~g~~ 383 (499)
++++++. . +.+... .+| ..+.........+. ....... +... ....++.++..+...
T Consensus 209 ~~~~~~~-~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (416)
T 3isl_A 209 ITYNERV-A-DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE 286 (416)
T ss_dssp EEECHHH-H-HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECHHH-H-HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 9987642 2 222211 011 11000000000000 0001111 1111 123455666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE
Q 010842 384 NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV 459 (499)
Q Consensus 384 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~ 459 (499)
+++++.++..++++++.+.|++. ++++..++. ..+++|.+.... ...++.+.|.++ |+.+..+...
T Consensus 287 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~~g~~~ 356 (416)
T 3isl_A 287 GLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI---------DGESVRDMLLAQFGIEIASSFGP 356 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECBCCCST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC---------CHHHHHHHHHHhCCEEEecCCCC
Confidence 78999999999999999999985 888775432 467778774211 145677777766 7443322211
Q ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 460 GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+..++|+++....+++++|++++++|+++.+++
T Consensus 357 ~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 357 LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 2346899999534445555999999999998765
No 21
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=2.9e-27 Score=238.23 Aligned_cols=342 Identities=12% Similarity=0.094 Sum_probs=233.7
Q ss_pred ccccCCCCCChHHHHHHHHHHHccc---CCc-ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNS---VGF-NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~~-~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
|+.+..+++.++.++.. +...+.. +.. .|..++.......++.+++++++|.+.+ ..++|+|||+|+.
T Consensus 3 yld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~ 74 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEA-MLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANN 74 (382)
T ss_dssp BCBTTTCCCCCHHHHHH-HHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHH
T ss_pred eeccCCCCCCCHHHHHH-HHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHH
Confidence 45555444445544433 3333321 111 2444455677888899999999998643 3689999999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
.++.+.+..... ++..|+++..+|.++..++.. .|+ +++.||++++ +.+|+++|+++|+++
T Consensus 75 ~~~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~---- 138 (382)
T 4eb5_A 75 LAIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKY--GEVDVSFIDQKLRDD---- 138 (382)
T ss_dssp HHHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCTT--SCBCHHHHHHHCCTT----
T ss_pred HHHHHHHhhccC-------CCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCCC--CccCHHHHHHHhcCC----
Confidence 998887632111 456788999999999888775 477 8999998754 589999999988643
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
+.+|++++++|++|.+.|+++|.++|++||+| |+|++|+.+....+ ... . .+|++++++||++ +|.|+|+
T Consensus 139 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~----~-~~di~~~s~sK~~-g~~g~G~ 208 (382)
T 4eb5_A 139 --TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEK----I-GADMLTISSNDIY-GPKGVGA 208 (382)
T ss_dssp --EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHH----H-TCSEEEEETGGGT-CCSSCEE
T ss_pred --CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-ccc----c-CCCEEEeehHHhc-CCCceEE
Confidence 45789999999999999999999999999999 99999985432111 111 1 3799999999985 4778999
Q ss_pred EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
++++++..+ ..++..... ......+... ....+..++..+ .++++++.++..++++++.+.
T Consensus 209 ~~~~~~~~l-------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 209 LWIRKEAKL-------QPVILGGGQ---------ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp EEEETTCCC-------CCSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccc-------CceecCCCc---------cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 998875211 111111000 0001111111 112334444443 357888999999999999999
Q ss_pred HhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------------C
Q 010842 403 VKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-------------------G 460 (499)
Q Consensus 403 L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------~ 460 (499)
|+++|++++..++ ..++++|++.+.. ..++.+.|.+.|+.+..+..+ .
T Consensus 272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~ 341 (382)
T 4eb5_A 272 VLKIEESYLNGHPEKRLPNNVNVRFSYIE----------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEE 341 (382)
T ss_dssp HTTSTTEEECSCSSSBCTTEEEEEETTSC----------HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHH
T ss_pred HhhCCCeEEeCCcccCCCCEEEEEeCCcC----------HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhc
Confidence 9999899887543 1457778775322 345667777778654332210 0
Q ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+..++|+++. ..+|++|+++++++|+++.+++.+
T Consensus 342 ~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 342 AHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1357999984 778999999999999999887764
No 22
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=1.7e-27 Score=240.73 Aligned_cols=358 Identities=11% Similarity=0.023 Sum_probs=240.9
Q ss_pred CCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 88 LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
..|+++.+.|++..++..+.+.+..... .. ..+.......++.+++++++|.+... ..++|+|||+|+.
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~ 88 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGSLRMI---GH--MQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAME 88 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTCCCC---CT--TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHH
T ss_pred CCccceeccCCCCCCCHHHHHHhccccc---Cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHH
Confidence 4577888888877766666555443221 11 23555677888899999999987541 3589999999998
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCch--hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHS--TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~--s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 245 (499)
.++.+..+ ++..|+++..+|+ .+...++..|. +++.+|++.++ .+|+++|++++++.
T Consensus 89 ~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~--~~d~~~l~~~i~~~----- 147 (393)
T 3kgw_A 89 TALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKPGE--HYTLQEVEEGLAQH----- 147 (393)
T ss_dssp HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCHHHHHHHHHHH-----
T ss_pred HHHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCCC--CCCHHHHHHHHhhC-----
Confidence 88887632 4667777777876 34778888999 99999998654 89999999999873
Q ss_pred ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL 325 (499)
Q Consensus 246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 325 (499)
.+.+|+++.++|++|.+.|+++|.++|++||+|+++|++|+.+....+. . -..+|++++++||++++|.|+|++
T Consensus 148 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-----~-~~~~d~~~~s~sK~~~~~~g~g~~ 221 (393)
T 3kgw_A 148 KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-----D-QQGIDIMYSSSQKVLNAPPGISLI 221 (393)
T ss_dssp CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-----T-TTTCCEEEEESSSTTCCCSSCEEE
T ss_pred CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-----h-hcCCCEEEecCcccccCCCceeEE
Confidence 1347899999999999999999999999999999999998744322110 0 113799999999999888899999
Q ss_pred EEeCchhHHHhhcCCcc---C-CCCCCCCCCCcccC-CCcccC-CCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPE---Y-LKNKPSESNSVVDF-KDWQVG-TGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~---y-l~~~~~~~~~~~~~-~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
+++++. .......... + +..... ...... ...... .+... ....+..++..+..++++++.++..+++++
T Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 298 (393)
T 3kgw_A 222 SFNDKA-KYKVYSRKTKPVSFYTDITYL--AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAH 298 (393)
T ss_dssp EECHHH-HHHHHTCSSCCSCSTTCHHHH--HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EECHHH-HHHHhccCCCCCceeecHHHH--HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 987642 2222111111 1 000000 000000 000000 01111 123444556666667789999999999999
Q ss_pred HHHHHhcCCCeEEEcCC---C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCC
Q 010842 399 FEGFVKSDPRFEIVVPR---H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASL 473 (499)
Q Consensus 399 l~~~L~~~~~~~~~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~ 473 (499)
+.+.|+++ ++++..+. . ..+++|.+.... ...++.++|.++ |+.+..+....+..++|++++...
T Consensus 299 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~ 368 (393)
T 3kgw_A 299 LHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY---------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYN 368 (393)
T ss_dssp HHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGG
T ss_pred HHHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC---------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccC
Confidence 99999998 88776322 1 244556664211 135677777777 754333222233467999984355
Q ss_pred CcHHHHHHHHHHHHHHHHHHhcc
Q 010842 474 TDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
+|++|+++++++|+++.+++.+.
T Consensus 369 ~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 369 ATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCBC
T ss_pred CCHHHHHHHHHHHHHHHHhhhhc
Confidence 69999999999999999877544
No 23
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=5.5e-27 Score=236.50 Aligned_cols=349 Identities=13% Similarity=0.027 Sum_probs=238.6
Q ss_pred cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVT 169 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~a 169 (499)
.|+.+-...+.++. +.+.+...+.. .| ++....+.+++.+++++++|.+ .. ..++|+|||+|+..+
T Consensus 21 ~~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~-------~v~~~~g~t~a~~~~ 87 (386)
T 2dr1_A 21 YKLFTAGPVACFPE-VLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKGE-------VLLVPSSGTGIMEAS 87 (386)
T ss_dssp SEECCSSSCCCCHH-HHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSSE-------EEEESSCHHHHHHHH
T ss_pred ceeecCCCcCCcHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc-------EEEEeCChHHHHHHH
Confidence 46665433333343 44444443321 22 3455788899999999999997 22 358999999999988
Q ss_pred HHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842 170 LIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP 247 (499)
Q Consensus 170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 247 (499)
+.+..+ ++..|+++..+|++ +..+++..|+ +++.+|++.+ +.+|+++|++++++. ..+
T Consensus 88 ~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~----~~~ 147 (386)
T 2dr1_A 88 IRNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEPG--KAVKPEDLDDALRKN----PDV 147 (386)
T ss_dssp HHHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHC----TTC
T ss_pred HHHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCCC--CCCCHHHHHHHHhcC----CCC
Confidence 887632 45678889999998 8889999999 9999999763 589999999999641 124
Q ss_pred EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842 248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV 327 (499)
Q Consensus 248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~ 327 (499)
.+|+++.++|++|.+.|+++|+++|++||+++|+|++|+.+....+ +... .+|++++++||+++.|.++|++++
T Consensus 148 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~G~~~~ 221 (386)
T 2dr1_A 148 EAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGLAIGAF 221 (386)
T ss_dssp CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSCEEEEE
T ss_pred cEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCceEEEEE
Confidence 5788889999999999999999999999999999999986643221 1111 479999999999999888999998
Q ss_pred eCchhHHHhhcCC--ccCCCCCCCCCCCcccCC-CcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 010842 328 KQPGLLVKALSTD--PEYLKNKPSESNSVVDFK-DWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 328 r~~~~l~~~~~~~--~~yl~~~~~~~~~~~~~~-~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~ 402 (499)
+++ .. +.+... ..+...... ...... ......+... ....+..+++.+... +++++.++..++++++.+.
T Consensus 222 ~~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 296 (386)
T 2dr1_A 222 SER-FL-EIAEKMPERGWYFDIPL---YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREG 296 (386)
T ss_dssp CHH-HH-HHHTTCTTCCSTTCHHH---HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHH-HH-HHHhcCCCCceEEeHHH---HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 754 22 222210 111000000 000000 0000111111 123444556555445 6888999999999999999
Q ss_pred HhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHH
Q 010842 403 VKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHV 479 (499)
Q Consensus 403 L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di 479 (499)
|++. ++++..+. ..++++|++.... ...++.++|.++|+.+..+....+..++|+++. ..+|++|+
T Consensus 297 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~~~~~i 365 (386)
T 2dr1_A 297 VREI-GLDILAEPGHESPTITAVLTPPGI---------KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM-GYMKFEDI 365 (386)
T ss_dssp HHHT-TCCBSSCTTCBCSSEEEEECCTTC---------CHHHHHHHHHHTTEECEECCGGGTTTEEEEECC-SSCCHHHH
T ss_pred HHHc-CCeeCcCccccCCceEEEEcCCCC---------CHHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCCCHHHH
Confidence 9988 88776442 3567777774211 145677888888754433322223457999995 67899999
Q ss_pred HHHHHHHHHHHHHHh
Q 010842 480 VAAWELIMEGADRLF 494 (499)
Q Consensus 480 ~~l~~~l~~~~~~l~ 494 (499)
++++++|+++.+++.
T Consensus 366 ~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 366 QEMLDNLREVINELK 380 (386)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999987764
No 24
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=2.1e-27 Score=236.27 Aligned_cols=341 Identities=13% Similarity=0.043 Sum_probs=230.0
Q ss_pred cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
+.|++..++..+.+.+...+.. ..++.......++.+++++++|.+... ...++|+|||+|+..++.+..
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence 4455544555555555444432 134666778888999999999986110 146899999999988877653
Q ss_pred HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
+ ..|+++...|++. .+.++..|+ +++.+|++++ +.+|+++|++++++. .+.+|++
T Consensus 74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~-----~~~~v~~ 130 (353)
T 2yrr_A 74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPPG--EPVDPEAVARALKRR-----RYRMVAL 130 (353)
T ss_dssp ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCTT--SCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHHHHHHhC-----CCCEEEE
Confidence 1 3477778888884 566788899 9999999864 589999999999762 2347888
Q ss_pred ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842 253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL 332 (499)
Q Consensus 253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~ 332 (499)
+.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ .. .. .+|++++++|||+++|.|+|+++++++.
T Consensus 131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~- 203 (353)
T 2yrr_A 131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MR----AM-GVDYAFTGSQKCLSAPPGLAPIAASLEA- 203 (353)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HH----HH-TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-cc----cc-CceEEEecCcccccCCCceEEEEECHHH-
Confidence 99999999999999999999999999999999964432211 11 11 3799999999999888899999987642
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCC-CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFK-DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~-~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
+ +.+...+.+..... ...... .....++... ....+..++..+...+++++.++..++++++.+.|++. +++
T Consensus 204 ~-~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 277 (353)
T 2yrr_A 204 R-KAFTGKRGWYLDLA----RVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFR 277 (353)
T ss_dssp H-HHCCCCSCSTTCHH----HHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred H-HHhccCCCccccHH----HHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 33321111110000 000000 0000111111 12334456666656678899999999999999999988 888
Q ss_pred EEcCC--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHH-HHHHHHH
Q 010842 411 IVVPR--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVV-AAWELIM 487 (499)
Q Consensus 411 ~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~-~l~~~l~ 487 (499)
++.++ ...+++|++.... ...++.++|.++|+.+..+.......++|+++. ...+++|++ +++++|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~~~l~ 347 (353)
T 2yrr_A 278 PYPKASPLPTVLVVRPPEGV---------DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLM-GEGARREAYQAFLKALD 347 (353)
T ss_dssp ESCSSSBCTTEEEEECCTTC---------CHHHHHHHHHHTTEECEECCGGGTTTCEEEECS-GGGSCHHHHHHHHHHHH
T ss_pred cccCccCCCeEEEEECCCCC---------CHHHHHHHHHHCCEEEeCCccccCCCeEEEecC-ccCCHHHHHHHHHHHHH
Confidence 87543 3455677764211 145677888888855443332333467999994 667888898 9999999
Q ss_pred HHHH
Q 010842 488 EGAD 491 (499)
Q Consensus 488 ~~~~ 491 (499)
++.+
T Consensus 348 ~~l~ 351 (353)
T 2yrr_A 348 RALA 351 (353)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 25
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=5.4e-27 Score=237.32 Aligned_cols=353 Identities=12% Similarity=0.050 Sum_probs=234.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHH
Q 010842 89 SPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILV 168 (499)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~ 168 (499)
.|+.+.+.+++..++..+.+.+...+.. .| ++.......++.+++++++|.+.+. ..++|+|||+|+..
T Consensus 17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~ 85 (393)
T 2huf_A 17 TPNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEA 85 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHH
T ss_pred CCCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHH
Confidence 4455556666555555555555544432 22 4555677788899999999986531 35899999999999
Q ss_pred HHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842 169 TLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 169 al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 246 (499)
++.+... ++..|+++..+|++. .+.++..|. +++.+|++++ +.+|+++|+++|++. .
T Consensus 86 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~-----~ 144 (393)
T 2huf_A 86 TLCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKVG--QSLSLDEIRDALLIH-----K 144 (393)
T ss_dssp HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH-----C
T ss_pred HHHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCCC--CCCCHHHHHHHHhcc-----C
Confidence 8887632 456788888899883 345566788 9999999764 489999999999762 1
Q ss_pred cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
+.+|++++++|++|.+.|+++|+++|++||+++|+|++++.+....+ +.. ..+|++++++||++++|.|+|+++
T Consensus 145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~sK~l~g~~G~G~~~ 218 (393)
T 2huf_A 145 PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDR-WEIDAMYTGSQKVLGAPPGITPVS 218 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTT-TTCSEEECCSSSTTCCCSSCEEEE
T ss_pred CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhh-cCccEEEECCCcccccCCCeEEEE
Confidence 33788899999999999999999999999999999999865432211 111 138999999999998888999999
Q ss_pred EeCchhHHHhhcCC----ccCCCCCCCCCCCccc-CC---CcccC-CCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842 327 VKQPGLLVKALSTD----PEYLKNKPSESNSVVD-FK---DWQVG-TGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLA 396 (499)
Q Consensus 327 ~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~-~~---~~~~~-~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a 396 (499)
+++ +.. +.+... .+|..+.. ...+ +. ..... ++.... ...+..+++.+...+++++.++..+++
T Consensus 219 ~~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 292 (393)
T 2huf_A 219 FSH-RAV-ERYKRRNTKVKVYYWDMS----LVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCA 292 (393)
T ss_dssp ECH-HHH-HHHHTCSSCCSCGGGCHH----HHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECH-HHH-HHHhhcCCCCceEEEchH----HHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 864 333 333221 22211100 0000 00 00000 111111 122333555554456888899999999
Q ss_pred HHHHHHHhcCCCeEEEcCC--Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCC
Q 010842 397 KMFEGFVKSDPRFEIVVPR--HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGAS 472 (499)
Q Consensus 397 ~~l~~~L~~~~~~~~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~ 472 (499)
+++.+.|+++ +++++.++ .. .+++|++.... ...++.++|.++ |+.+..+....+..++|++++.+
T Consensus 293 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~ 362 (393)
T 2huf_A 293 KRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV---------DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQ 362 (393)
T ss_dssp HHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGG
T ss_pred HHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC---------CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccC
Confidence 9999999988 88776443 22 36777764211 034567777654 74432222222446799999535
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhc
Q 010842 473 LTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 473 ~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.++++|+++++++|+++.+++..
T Consensus 363 ~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 363 NATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCC
Confidence 57899999999999999887643
No 26
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=2.1e-26 Score=235.45 Aligned_cols=343 Identities=15% Similarity=0.147 Sum_probs=233.5
Q ss_pred cccccCCCCCChHHHHHHHHHHHcc--cC-C---c-ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFN--SV-G---F-NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 163 (499)
.|+++..+++.++.+ .+.+...+. .. . . .+..+........++.+++++++|.+.+ ..++|+|||
T Consensus 24 iyld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggt 95 (423)
T 3lvm_A 24 IYLDYSATTPVDPRV-AEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGAT 95 (423)
T ss_dssp EECBTTTCCCCCHHH-HHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSHH
T ss_pred EeecCCCcCCCCHHH-HHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCChH
Confidence 456665444444444 444444333 11 1 1 2333345567778889999999999754 369999999
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 240 (499)
+|+..++.+..+...+ ++..|+++..+|.++..++..+ |+ +++.+|++++ +.+|+++|+++++++
T Consensus 96 ~a~~~a~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 96 ESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQRN--GIIDLKELEAAMRDD 163 (423)
T ss_dssp HHHHHHHHHHHHHHTT-------TCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCTT--SCCCHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHhhcc-------CCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCCC--CccCHHHHHHhcCCC
Confidence 9999999887653211 4678899999999998888655 88 9999998864 589999999998653
Q ss_pred HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL 320 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 320 (499)
+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+. ... .+|++++++||++ +|.
T Consensus 164 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-----~~~-~~di~~~s~sK~~-g~~ 230 (423)
T 3lvm_A 164 ------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDL-----SQL-KVDLMSFSGHKIY-GPK 230 (423)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCT-----TTS-CCSEEEEESTTTT-SCS
T ss_pred ------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcCh-----hhc-CCCEEEechHHhc-CCC
Confidence 458889999999999999999999999999999999999875432211 111 3899999999965 577
Q ss_pred cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
++|+++++++.. .....+....... .....+. .. ....+..++..+. +.++++.++..+++++
T Consensus 231 g~G~~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~ 295 (423)
T 3lvm_A 231 GIGALYVRRKPR-----VRIEAQMHGGGHE---------RGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNR 295 (423)
T ss_dssp SCEEEEECBTTB-----CCCCCSSCSSCTT---------TTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecccc-----CCCCccccCCccc---------ccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 799999876421 1111111111000 0000111 11 1122334444432 3478899999999999
Q ss_pred HHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---------------C
Q 010842 399 FEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---------------G 460 (499)
Q Consensus 399 l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------------~ 460 (499)
+.+.|+++|+++++.++. .+.++|++.... ...+.+.|.+ +.+.+... .
T Consensus 296 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g 362 (423)
T 3lvm_A 296 LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE----------GESLIMALKD---LAVSSGSACTSASLEPSYVLRALG 362 (423)
T ss_dssp HHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC----------HHHHHHHTTT---EECBCCCC-----CCCCHHHHHHT
T ss_pred HHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC----------HHHHHHHHhh---heeccCccccCCCccccHHHHHhC
Confidence 999999999999886543 357778774432 3445555544 33332211 0
Q ss_pred -----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 461 -----GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 461 -----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
...++|+++. ..+|++||++++++|+++.+++.+
T Consensus 363 ~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 363 LNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 0367999995 788999999999999999887654
No 27
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=2e-27 Score=239.46 Aligned_cols=317 Identities=15% Similarity=0.078 Sum_probs=225.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--H
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--F 201 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~ 201 (499)
++....+..++.+++++++|.+... ...++|+|||+|+. ++.+... ++..|+++..+|++ +
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~ 92 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW 92 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence 4556778888999999999997620 14699999999998 7765421 46678888889876 6
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
...++..|+ +++.+|++.+ +.+|+++|++++++. .+.+|+++.++|++|.+.|+++|.++|++||+|+|+
T Consensus 93 ~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 93 EQIFKRYPV---NVKVLRPSPG--DYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVV 162 (384)
T ss_dssp HHHHTTSSC---EEEEECCSTT--CCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHcCC---cEEEecCCCC--CCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence 666778898 9999999864 489999999999762 145889999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHh-hc-CCccCCCCCCCCCCCcccCCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA-LS-TDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~-~~-~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|++|+.+....+. .. ..+|++++++||++++|.|+|+++++++. +.+. .. ....+.... ..+..
T Consensus 163 D~a~~~~~~~~~~-----~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~ 228 (384)
T 3zrp_A 163 DGVSSVGAEEVKA-----EE-WNVDVYLTASQKALGSAAGLGLLLLSPKA-LSILDSQNSIAGYYLDL-------RNWLP 228 (384)
T ss_dssp ECTTTTTTSCCCT-----TT-TTCSEEEEETTSTTCCCSSEEEEEECHHH-HHHHHHCCCSCCSTTCH-------HHHHH
T ss_pred ECcccccCccccc-----cc-cCCCEEEecCcccccCCCceEEEEECHHH-HHHhcCCCCCCcccccH-------HHHHH
Confidence 9999765432111 11 14899999999999888899999987643 2221 11 011111000 00000
Q ss_pred cccC----CCCCC------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----CceEEEEEec
Q 010842 360 WQVG----TGRRF------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----HFALVCFRLN 425 (499)
Q Consensus 360 ~~~~----~sr~~------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~ 425 (499)
.... ...++ ....+..++..+...+++++.++..++++++.+.|+++ +++++.++ ...+++|++.
T Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 307 (384)
T 3zrp_A 229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILK 307 (384)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECS
T ss_pred HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECC
Confidence 0000 11111 12345566666666778999999999999999999998 88876544 3566677775
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
... ..++.+.|.++|+.+..+..... .++|+++. ..+|++|+++++++|+++.+++.
T Consensus 308 ~~~----------~~~~~~~l~~~gi~v~~g~~~~~-~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 308 VAD----------PQKVLAGTVNEGVEFAPGVHPAF-KYFRIGHM-GWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSC----------HHHHHHHHHTTTCCCEECCCTTC-CEEEEECC-SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCC----------HHHHHHHHHHCCEEEecCCCCCc-CEEEEecc-ccCCHHHHHHHHHHHHHHHHHcC
Confidence 422 45678888888865443221111 67999985 66899999999999999988764
No 28
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=2.6e-26 Score=232.24 Aligned_cols=353 Identities=11% Similarity=-0.001 Sum_probs=235.9
Q ss_pred CCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 88 LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
.++.|+.+....+.++. +.+.+...+.. . .++.......++.+++++++|.+.+ ..++|+|||+|+.
T Consensus 7 ~~~~yl~~~~~~~~~~~-v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~ 73 (392)
T 2z9v_A 7 ADPVITLTAGPVNAYPE-VLRGLGRTVLY---D--YDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLE 73 (392)
T ss_dssp SCCSEECSSSCCCCCHH-HHHHTTSCCCC---T--TSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHH
T ss_pred CCcceeecCCCcCCCHH-HHHHHhccccc---c--ccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHH
Confidence 35567776543343443 44444443432 1 2355566777888999999998643 3689999999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 245 (499)
.++.+... ++..|+++..+|++. ...++..|+ +++.+|++++ +.+|+++|++++++. .
T Consensus 74 ~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~----~ 133 (392)
T 2z9v_A 74 AAAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPYN--EAIDPQAVADMLKAH----P 133 (392)
T ss_dssp HHHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCTT--SCCCHHHHHHHHHHC----T
T ss_pred HHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCCC--CCCCHHHHHHHHhcC----C
Confidence 88887632 456788888899875 344566899 9999999865 489999999999641 1
Q ss_pred ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL 325 (499)
Q Consensus 246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 325 (499)
.+.+|+++.++|+||.+.|+++|.++|++||+|+|+|++|+.+....+ . ... .+|++++++|||+++|.|+|++
T Consensus 134 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~----~~~-~~d~~~~s~sK~~~~~~g~G~l 207 (392)
T 2z9v_A 134 EITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-P----EDC-KADIYVTGPNKCLGAPPGLTMM 207 (392)
T ss_dssp TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-G----GGG-TCSEEEECSSSTTCCCSCCEEE
T ss_pred CCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-c----ccc-cceEEEecCcccccCCCceeEE
Confidence 245788999999999999999999999999999999999976433221 1 111 3799999999999988899999
Q ss_pred EEeCchhHHHhhcC-C--cc-CCCCCCCCCCCcccCCCccc-CCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALST-D--PE-YLKNKPSESNSVVDFKDWQV-GTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 326 ~~r~~~~l~~~~~~-~--~~-yl~~~~~~~~~~~~~~~~~~-~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l 399 (499)
+++++. . +.+.. . +. +..+..... ..+..... .++.... ...+..++..+...|++++.++..++++++
T Consensus 208 ~~~~~~-~-~~l~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 208 GVSERA-W-AKMKANPLAPRASMLSIVDWE---NAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp EECHHH-H-HHHHTCTTSCCSSTTCSGGGT---TTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EECHHH-H-HHhhhccCCCCceeccHHHHH---hhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 987642 2 22211 1 11 111100000 00000000 1111111 123455666655556888999999999999
Q ss_pred HHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCC
Q 010842 400 EGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLT 474 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~ 474 (499)
.+.|+++ +++++.++ ..++++|++.... ...++.++|.++ |+.+..+....+..++|+++..+.+
T Consensus 283 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~ 352 (392)
T 2z9v_A 283 RAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV---------DEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTA 352 (392)
T ss_dssp HHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC
T ss_pred HHHHHHc-CCeeccCCccccCCceEEEECCCCC---------CHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccccc
Confidence 9999987 88876523 3566778774211 135677778776 8554433322344679999643478
Q ss_pred cHHHHHHHHHHHHHHHHHHh
Q 010842 475 DERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~~l~ 494 (499)
|++|+++++++|+++.+++.
T Consensus 353 ~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 353 QPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp SHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999887653
No 29
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=5.1e-27 Score=233.69 Aligned_cols=340 Identities=14% Similarity=0.029 Sum_probs=229.1
Q ss_pred cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
+.|++..++..+.+.+...+.. ..++.......++++++++++|.+.+ ..++|+|||+|+..++.+..
T Consensus 5 ~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~ 72 (352)
T 1iug_A 5 LTPGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLF 72 (352)
T ss_dssp CSSSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHC
T ss_pred ccCCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhcc
Confidence 3445544455555666655542 13455566777888999999998743 46999999999999888763
Q ss_pred HHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 175 DRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
. ++..|+++..+|++.. +.++..|+ +++.+|++.+ +.+|+++|++ + .+.+|++
T Consensus 73 ~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~---~------~~~~v~~ 127 (352)
T 1iug_A 73 A-----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPYG--DTPRPEDVAK---E------GYAGLLL 127 (352)
T ss_dssp C-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCTTTSCC---S------SCSEEEE
T ss_pred C-----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHhc---c------CCcEEEE
Confidence 2 4567888889999965 45566788 9999999764 4899998877 1 2447888
Q ss_pred ecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842 253 TVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 253 t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
++++|+||.+.|+++|.++|++| |+|+|+|++|+.+....+ .. .. .+|++++++|||+++|.|+|+++++++
T Consensus 128 ~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~ 201 (352)
T 1iug_A 128 VHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LE----AM-GVDAAASGSQKGLMCPPGLGFVALSPR 201 (352)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SG----GG-TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred EEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-cc----cc-CeeEEEecCcccccCCCceeEEEECHH
Confidence 99999999999999999999999 999999999975432221 11 11 389999999999999989999998654
Q ss_pred hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
. + +.+.. ..+...... ............+.... ...+..++..+... ++++.++..++++++.+.|++. ++
T Consensus 202 ~-~-~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~ 273 (352)
T 1iug_A 202 A-L-ERLKP-RGYYLDLAR---ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GL 273 (352)
T ss_dssp H-H-HTCCC-CSSTTCHHH---HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred H-H-HHhhC-CCceeeHHH---HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 2 2 22211 111000000 00000000000111111 12334455544433 7888999999999999999998 88
Q ss_pred EEEcCC-CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 410 EIVVPR-HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 410 ~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
+++.++ ..++++|++.... ...++.++|.++|+.+..+....+..++|+++. ..+|++|+++++++|++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~ 343 (352)
T 1iug_A 274 RPVPKRFSPAVAAFYLPEGV---------PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLM-GAYDRYEALGVAGMFRE 343 (352)
T ss_dssp EESCSSBCTTCEEEECCTTC---------CHHHHHHHHHTTTEECEECCGGGTTTEEEECCC-SSCCHHHHHHHHHHHHH
T ss_pred cccccccCCeEEEEEcCCCC---------CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEcc-ccCCHHHHHHHHHHHHH
Confidence 877543 4567788775211 145677888888854433322123467999995 67889999999999999
Q ss_pred HHHHHhc
Q 010842 489 GADRLFK 495 (499)
Q Consensus 489 ~~~~l~~ 495 (499)
+.+++..
T Consensus 344 ~~~~~~~ 350 (352)
T 1iug_A 344 VLEEILP 350 (352)
T ss_dssp HHHHHC-
T ss_pred HHHHhcC
Confidence 9887743
No 30
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=7.9e-27 Score=241.81 Aligned_cols=357 Identities=11% Similarity=0.053 Sum_probs=238.2
Q ss_pred cccccCCCCCChH---HHHHHHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 91 NFFAFFPATVSTA---GFLGEMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 91 ~~~~~~~~~~~~~---~~~~~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
.|+...+.++.+. ..+.+.+....+.+...|.. .+....+.+++.+++++++|.+.+ ..++|+|+|+++
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al 141 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-------EIALMNALTVNL 141 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHH
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHH
Confidence 3555554443332 33445554433333333332 233455666788999999999754 468999999988
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCe-----EEeeCCCCCCCccCHHHHHHHH
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANI-----RALPTSVDANFSLSPQLLRRAV 237 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v-----~~v~~~~~~~~~~d~~~L~~~i 237 (499)
..++.+..+. +.++.+|+++..+|++ +...++..|+ ++ ..+|.+. ++.+|+++|+++|
T Consensus 142 ~~~~~~~~~~--------~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~---~~~~~~v~~~~~~~--~~~~d~~~l~~~i 208 (465)
T 3e9k_A 142 HLLMLSFFKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---NIEESMRMIKPREG--EETLRIEDILEVI 208 (465)
T ss_dssp HHHHHHHCCC--------CSSSCEEEEETTCCHHHHHHHHHHHHHTTC---CHHHHEEEECCCTT--CSSCCHHHHHHHH
T ss_pred HHHHHHhccc--------cCCCCEEEEcCCcCCchHHHHHHHHHHcCC---cceeeeEEEecCCC--CCccCHHHHHHHH
Confidence 8777765321 2245679999999988 4456778898 64 3345543 4699999999999
Q ss_pred HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc
Q 010842 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL 317 (499)
Q Consensus 238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~ 317 (499)
++.. ..+.+|++++++|+||.+.|+++|.++|++||+++|+|+||+.+....+-.. . .+|++++++||+++
T Consensus 209 ~~~~---~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~---~---~~D~~~~s~~K~l~ 279 (465)
T 3e9k_A 209 EKEG---DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD---W---GVDFACWCSYKYLN 279 (465)
T ss_dssp HHHG---GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH---H---TCCEEEECSSSTTC
T ss_pred HhcC---CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh---c---CCCEEEECcccccc
Confidence 8642 1356899999999999999999999999999999999999987654332111 1 38999999999994
Q ss_pred -CCCcceEEEEeCchhHHHhhc-CCccCCCCCC---C--CCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHH
Q 010842 318 -SYLDCCCLWVKQPGLLVKALS-TDPEYLKNKP---S--ESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSH 388 (499)
Q Consensus 318 -~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~---~--~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~ 388 (499)
.|.++|+++++++. . +.+. ....|..... . .....+......++.+... ....+++++..+...+++++
T Consensus 280 ~gp~~~g~l~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~ 357 (465)
T 3e9k_A 280 AGAGGIAGAFIHEKH-A-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKAL 357 (465)
T ss_dssp CCTTCCCEEEECGGG-T-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cCCCceEEEEEcHHH-H-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHH
Confidence 78888999987642 1 1111 1111111100 0 0000000001112222222 24566777777777778999
Q ss_pred HHHHHHHHHHHHHHHhcC----------CCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE
Q 010842 389 IRSDIRLAKMFEGFVKSD----------PRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL 454 (499)
Q Consensus 389 ~~~~~~~a~~l~~~L~~~----------~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 454 (499)
.++..++++++.+.|+++ ++++++.+. ..++++|++... ..++.+.|.++|+++.
T Consensus 358 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~-----------~~~l~~~L~~~Gi~v~ 426 (465)
T 3e9k_A 358 RKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP-----------NKDVFQELEKRGVVCD 426 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT-----------TCCHHHHHHTTTEECE
T ss_pred HHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC-----------HHHHHHHHHHCCEEEe
Confidence 999999999999999885 789988654 267788887521 2356777888885432
Q ss_pred EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 455 THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 455 ~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.+..++|+++++..+|++||++++++|+++.++.
T Consensus 427 ----~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 427 ----KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp ----EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ----cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 33446899998668899999999999999987643
No 31
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=1.1e-27 Score=239.48 Aligned_cols=343 Identities=13% Similarity=0.043 Sum_probs=232.7
Q ss_pred cccccCCCCCChHHHHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT 169 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a 169 (499)
+++.+.|++..+|..+.+.+...+.... .....++....+.+++.+++++++|.+... ..++|+|||+|+..+
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~ 77 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERI 77 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHH
Confidence 3566777776665555544444443222 122346777788899999999999986421 468999999999888
Q ss_pred HHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842 170 LIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP 247 (499)
Q Consensus 170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 247 (499)
+.+... + .+++....|++ +...++..|+ +++.||.+.+ +.+|+++|+ +.+ .+
T Consensus 78 ~~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~--~~~------~~ 131 (362)
T 3ffr_A 78 IQNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAFG--KGFYPADIT--VPA------DA 131 (362)
T ss_dssp HHHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCGGGCC--CCT------TC
T ss_pred HHhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCCC--CCCCHHHHh--ccC------Cc
Confidence 876631 3 34444556666 4456778899 9999998753 589999998 332 34
Q ss_pred EEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 248 LFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
.+|++++++|++|.+.|+++|+++|++| |+|+|+|++|+.+.... .+..+|++++++|||+++|.|+|+++
T Consensus 132 ~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~--------~~~~~d~~~~s~~K~~~~~~G~g~~~ 203 (362)
T 3ffr_A 132 EIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKF--------DWTKIDSVFFSVQKCFGLPAGLGVWI 203 (362)
T ss_dssp CEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCC--------CTTSCSEEEEETTSTTCCCSCCEEEE
T ss_pred cEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCccc--------ChhHCcEEEEecccccCCCCceEEEE
Confidence 5888999999999999999999999999 99999999987653221 12238999999999999888999988
Q ss_pred EeCchhHHHhhcCC-----ccCCCCCCCCCCCccc-CCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842 327 VKQPGLLVKALSTD-----PEYLKNKPSESNSVVD-FKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 327 ~r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~-~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l 399 (499)
++++. +.+..... ..+..... ...+ ........+... ....+..+++.+...+++++.++..++++++
T Consensus 204 ~~~~~-~~~~~~~~~gg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l 278 (362)
T 3ffr_A 204 LNDRV-IEKSKALLAKRKSIGTYHTIP----SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALI 278 (362)
T ss_dssp EEHHH-HHHHHHHHHTTCCCCSTTSHH----HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ECHHH-HHHhhhccccCCCCcccccHH----HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 87642 21111110 11110000 0000 000000111111 1234555666655667899999999999999
Q ss_pred HHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842 400 EGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t 475 (499)
.+.|+++|+++++.+. ...+++|.+.. . ..++.+.|.++|+.+..+....+..++|+++. ..++
T Consensus 279 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~-~~~~ 346 (362)
T 3ffr_A 279 NTYIESSKVFSFGVEDAKLRSMTTIVANTTM-L----------PGEINKILEPFDMAVGAGYGSKKETQIRIANF-PAHS 346 (362)
T ss_dssp HHHHHHCSSEEESSSCGGGBCSSEEEEEESS-C----------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECC-TTSC
T ss_pred HHHHHHccCceeccCChhhcCCceEEEecCC-C----------HHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCCC
Confidence 9999999999987521 34567777654 2 56788888888865544333334567999995 6789
Q ss_pred HHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGA 490 (499)
Q Consensus 476 ~~di~~l~~~l~~~~ 490 (499)
++||++++++|+++.
T Consensus 347 ~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 347 LEQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998763
No 32
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.3e-26 Score=234.61 Aligned_cols=317 Identities=14% Similarity=0.031 Sum_probs=222.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FA 202 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ 202 (499)
+....+.+++.+++++++|.+.+. ..++|+|||+|+..++.++.+ ++..|+++..+|++ +.
T Consensus 63 ~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~ 125 (393)
T 1vjo_A 63 PAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIANAVE-----------PGDVVLIGVAGYFGNRLV 125 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHHHHCC-----------TTCEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHHhccC-----------CCCEEEEEcCChhHHHHH
Confidence 446678889999999999996430 259999999999998887742 45678888899998 99
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.+++..|+ +++.+|++.+ +.+|+++|++++++. .+.+|+++.++|++|.+.|+++|.++|+++|+++++|
T Consensus 126 ~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 195 (393)
T 1vjo_A 126 DMAGRYGA---DVRTISKPWG--EVFSLEELRTALETH-----RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVD 195 (393)
T ss_dssp HHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEE
T ss_pred HHHHHcCC---ceEEEecCCC--CCCCHHHHHHHHhhC-----CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEE
Confidence 99999999 9999999864 589999999999763 1337888999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC----ccCCCCCCCCCCCcccC-
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD----PEYLKNKPSESNSVVDF- 357 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~~- 357 (499)
++|+.+....+ +.. ..+|+++.++||+++.|.++|+++++++. . +.+... .++..+... ..++
T Consensus 196 ea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~ 263 (393)
T 1vjo_A 196 TVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSRA-I-EKLQRRRTKVANWYLDMNL----LGKYW 263 (393)
T ss_dssp CTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHHH-H-HHHHTCSSCCSCSTTCHHH----HHHHH
T ss_pred CCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECHHH-H-HHHhccCCCCCceecCcHh----hhhhh
Confidence 99984322111 111 24799999999999999889999987642 2 222111 111110000 0000
Q ss_pred CCcccCC-CCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCc
Q 010842 358 KDWQVGT-GRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGS 432 (499)
Q Consensus 358 ~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~ 432 (499)
....... +.. .....+..+++.+..++++++.++..++++++.+.|++. ++++..+.. .++++|++....
T Consensus 264 ~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---- 338 (393)
T 1vjo_A 264 GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDGV---- 338 (393)
T ss_dssp STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTTC----
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCCC----
Confidence 0000111 111 112344555665555678889999999999999999988 887764432 356777763211
Q ss_pred chhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 433 ADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
...++.++|.++ |+.+..+....+..++|+++....++++++++++++|+++.
T Consensus 339 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 339 -----DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp -----CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 145677788777 86544433333456799996445678889999999998764
No 33
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.8e-26 Score=235.48 Aligned_cols=321 Identities=12% Similarity=0.073 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HH
Q 010842 128 TELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FA 202 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ 202 (499)
.....++.+++++++|. +.+ ..++|+|||+|+..++.+++..... ++..|+++..+|.+ +.
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~Vl~~~~~~~~~~~~~~ 136 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPR-------EIVYTRNATEAINLVAYSWGMNNLK-------AGDEIITTVMEHHSNLVPWQ 136 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHHHHHHHHHHhhhcccC-------CCCEEEECcchhHHHHHHHH
Confidence 45556677889999998 433 4699999999999998887421111 45678889999988 66
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
..++..|+ +++.+|++. ++.+|+++|+++++++ +.+|+++.++|++|.+.|+++|.++|++||+|+|+|
T Consensus 137 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 205 (420)
T 1t3i_A 137 MVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVD 205 (420)
T ss_dssp HHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEE
Confidence 77888999 999999874 3689999999998643 458889999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc-cCCCCCC-CCCCCcccCCCc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP-EYLKNKP-SESNSVVDFKDW 360 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~-~~~~~~~~~~~~ 360 (499)
++|+.+.... .... . ..|++++++||.+ +|.|+|+++++++ .. +.+.... .+..... ......+....+
T Consensus 206 ~a~~~~~~~~-~~~~----~-~~di~~~s~sK~~-~~~g~G~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
T 1t3i_A 206 ACQSAPHYPL-DVQL----I-DCDWLVASGHKMC-APTGIGFLYGKEE-IL-EAMPPFFGGGEMIAEVFFDHFTTGELPH 276 (420)
T ss_dssp CTTTTTTSCC-CHHH----H-TCSEEEEEGGGTT-SCTTCEEEEECHH-HH-HHSCCCSCSTTSEEEECSSCEEECCTTG
T ss_pred hhhccCCccC-chhh----c-CCCEEEEehhhhc-CCCceEEEEEchH-HH-hhcCceecCCCccccccccccCCCCchh
Confidence 9998654321 1111 1 3799999999954 5677999888643 22 3332111 0000000 000000000001
Q ss_pred ccCCCCC-CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcc
Q 010842 361 QVGTGRR-FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSA 433 (499)
Q Consensus 361 ~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~ 433 (499)
....+.. .. .+.++.+++.+...+++++.++..++++++.+.|+++|+++++.++ ..++++|.+.+..
T Consensus 277 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 351 (420)
T 1t3i_A 277 KFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH----- 351 (420)
T ss_dssp GGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC-----
T ss_pred hccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC-----
Confidence 1111111 11 1223335565655578889999999999999999999999988654 3677888764321
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEee-------eECC-EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 434 DTEMLNRKLLDWVNSTGRVYLTHT-------IVGG-LYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..++.+.|.+.|+.+..+. ...+ ..++|+++. ..++++|+++++++|+++.+.+
T Consensus 352 -----~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 352 -----ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp -----HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 3456777778885432221 1112 568999995 7789999999999999998876
No 34
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=1.1e-26 Score=235.44 Aligned_cols=358 Identities=12% Similarity=0.012 Sum_probs=237.6
Q ss_pred CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
...++.+.+.+++..++..+.+.+...+.. .| ++.......++.+++++++|.+.+. ..++|+|||+|+
T Consensus 14 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al 82 (396)
T 2ch1_A 14 LIIPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGM 82 (396)
T ss_dssp CCCCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHH
T ss_pred CCCCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHH
Confidence 345666777777666665555555443321 23 4444456677888899999987541 258999999999
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
..++.+... ++..|+++..+|.++. +.++..|+ +++.||++.+ +.+|+++|++++++.
T Consensus 83 ~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~---- 142 (396)
T 2ch1_A 83 EAMLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPD--RPFSLETLARAIELH---- 142 (396)
T ss_dssp HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--SCCCHHHHHHHHHHH----
T ss_pred HHHHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCCC--CCCCHHHHHHHHHhC----
Confidence 988877632 4567888889998874 57888999 9999998753 589999999999763
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
.+.+|+++.++|+||.+.|+++|.++|+++|+++|+|++|+.+....+ +... .+|++++++||+++.|.++|+
T Consensus 143 -~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~ 215 (396)
T 2ch1_A 143 -QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITP 215 (396)
T ss_dssp -CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEE
T ss_pred -CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEE
Confidence 133788899999999999999999999999999999999984422111 1111 379999999999999989999
Q ss_pred EEEeCchhHHHhhcCC----ccCCCCCCCC--CCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTD----PEYLKNKPSE--SNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAK 397 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~----~~yl~~~~~~--~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~ 397 (499)
+++++. .+ ..+... ..+..+.... .-.......+ ...+... ....+..++..+..++++++.++..++++
T Consensus 216 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 292 (396)
T 2ch1_A 216 ISISPK-AL-DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQ 292 (396)
T ss_dssp EEECHH-HH-HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEECHH-HH-HhhhhccCcccceEechHHHHHhhhhhcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 988763 23 222211 1111100000 0000000000 0111111 11334445655555678889999999999
Q ss_pred HHHHHHhcCCCeEEEcCCC----ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCC
Q 010842 398 MFEGFVKSDPRFEIVVPRH----FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGAS 472 (499)
Q Consensus 398 ~l~~~L~~~~~~~~~~~~~----~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~ 472 (499)
++.+.|+++ +++++.+.. ..+++|++.... ...++.++|.++ |+.+..+.......++|++++.+
T Consensus 293 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~ 362 (396)
T 2ch1_A 293 ILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV---------DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGE 362 (396)
T ss_dssp HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGG
T ss_pred HHHHHHHHC-CCeeccCCccccCCceEEEEcCCCC---------CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCC
Confidence 999999988 887764432 136777764210 135677777665 86443222222346799999545
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhc
Q 010842 473 LTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 473 ~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.++++|+++++++|+++.+++..
T Consensus 363 ~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 363 CSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHHHHHHHhCc
Confidence 67999999999999999887754
No 35
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=2.5e-25 Score=224.01 Aligned_cols=341 Identities=14% Similarity=0.101 Sum_probs=227.0
Q ss_pred ccccCCCCCChHHHHHHHHHHHccc---CC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 92 FFAFFPATVSTAGFLGEMLCACFNS---VG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
|+++...++.++.++ +.+...+.. +. ..+..+........++.+++++++|.+.+ ..++|+|||+|+.
T Consensus 4 yld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~ 75 (384)
T 1eg5_A 4 YFDNNATTRVDDRVL-EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESIN 75 (384)
T ss_dssp ECBTTTCCCCCHHHH-HHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHH
T ss_pred EEecCccCCCCHHHH-HHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHHH
Confidence 555554444445444 333433321 11 11222334456677788889999998754 3699999999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
.++.+++.... .++..|+++..+|.++...+ +..|+ +++.+|++++ +.+|+++|+++++++
T Consensus 76 ~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~---- 139 (384)
T 1eg5_A 76 WILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDSR--GVVKLEELEKLVDED---- 139 (384)
T ss_dssp HHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCTT--SCBCHHHHHHHCCTT----
T ss_pred HHHHhhhhhcc-------CCCCEEEECCCCchHHHHHHHHHHhcCC---EEEEEccCCC--CccCHHHHHHHhCCC----
Confidence 99888763100 04567888999999987766 67788 9999998753 589999999988643
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhC--CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYG--IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~--~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+.+|+++.++|++|.+.|+++|.++|++|| +++|+|++|+.+.... . +... .+|++++++||+++ |.|+
T Consensus 140 --~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~-~----~~~~-~~di~~~s~sK~~g-~~G~ 210 (384)
T 1eg5_A 140 --TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPF-S----LEKL-EVDYASFSAHKFHG-PKGV 210 (384)
T ss_dssp --EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCC-C----CTTT-CCSEEEEEGGGGTS-CTTC
T ss_pred --CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCccc-C----chhc-CCCEEEecHHHhcC-CCce
Confidence 457888999999999999999999999999 9999999987332111 1 1122 48999999999865 5568
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH---HHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL---RLWMVLRSYGVLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~~a~~l 399 (499)
|+++++++. ... .++...... .....+ ....+ .++.+++.. .+++++..++..++++++
T Consensus 211 G~~~~~~~~------~~~-~~~~~~~~~---------~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 211 GITYIRKGV------PIR-PLIHGGGQE---------RGLRSG-TQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp EEEEECTTS------CCC-CSBCSSCTT---------TTTBCS-CCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC------ccc-cccccCccc---------ccccCC-CCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 999987642 011 111111000 000011 11222 233444432 356788899999999999
Q ss_pred HHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----------------
Q 010842 400 EGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG---------------- 460 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------- 460 (499)
.+.|++ ++++++.++ ....+.|.+.... ..++.+.|.+.|+.+..+..+.
T Consensus 273 ~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~ 341 (384)
T 1eg5_A 273 VSGLMN-LGAHIITPLEISLPNTLSVSFPNIR----------GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVD 341 (384)
T ss_dssp HHHHHT-TTCEECSCTTSBCTTEEEEECTTCC----------HHHHHHHHHHTTEECBC------------CHHHHTTCC
T ss_pred HHHhCC-CCeEEeCCcccCCCCEEEEEeCCCC----------HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCC
Confidence 999998 689887543 2356777765321 3466777777785433222121
Q ss_pred ---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 461 ---GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 461 ---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+..++|+++. +.+|++|+++++++|+++.+++.+
T Consensus 342 ~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 342 RRIAQGAIRISLC-KYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHHHHHEEEEECC-TTCCHHHHHHHHHHHHHHHHHC--
T ss_pred hhhcCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1368999984 778999999999999999887644
No 36
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=1.7e-25 Score=227.07 Aligned_cols=319 Identities=16% Similarity=0.140 Sum_probs=218.8
Q ss_pred hHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----
Q 010842 127 STELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF---- 201 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~---- 201 (499)
......++.+++++++|. +.+ ..++|+|||+|+..++.+++..... ++..|+++..+|++.
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~vl~~~~~~~~~~~~~ 130 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAE-------ELVFVRGTTEGINLVANSWGNSNVR-------AGDNIIISQMEHHANIVPW 130 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhHHHHHHHHHhhhhcCC-------CCCEEEEecccchHHHHHH
Confidence 345566677889999998 333 4689999999999999887532111 456788888998764
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
...++..|+ +++.+|++++ +.+|+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++++
T Consensus 131 ~~~~~~~g~---~~~~~~~~~~--~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 131 QMLCARVGA---ELRVIPLNPD--GTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV 199 (406)
T ss_dssp HHHHHHHTC---EEEEECBCTT--SCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCC---EEEEEecCCC--CCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence 345778899 9999998753 589999999998643 45888999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC-C---CC--Ccc
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS-E---SN--SVV 355 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~---~~--~~~ 355 (499)
|++|+.+....+ ... . ..|+++.++||++ +|.|+|+++++++ .. +.+... ..+... . .. ...
T Consensus 200 D~~~~~g~~~~~-~~~----~-~~d~~~~s~~K~~-g~~G~G~~~~~~~-~~-~~~~~~---~~~~~~~~~~~~~~~~~~ 267 (406)
T 1kmj_A 200 DGAQAVMHHPVD-VQA----L-DCDFYVFSGHKLY-GPTGIGILYVKEA-LL-QEMPPW---EGGGSMIATVSLSEGTTW 267 (406)
T ss_dssp ECTTTTTTSCCC-HHH----H-TCSEEEEEGGGTT-SCTTCEEEEECHH-HH-HHCCCS---SCSTTSEEEEETTTEEEE
T ss_pred EchhhcCCCCCc-ccc----c-CCCEEEEEchhcc-CCCCcEEEEEeHH-HH-hhcCCc---ccCCCceeeccccccccc
Confidence 999987543221 111 1 3899999999988 5667999998643 22 333211 100000 0 00 000
Q ss_pred cCCCcccCCCCC-CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCc
Q 010842 356 DFKDWQVGTGRR-FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGS 432 (499)
Q Consensus 356 ~~~~~~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~ 432 (499)
....+..+.+.. .. ...+..++..+...+++++.++..++++++.+.|+++|+++++.++ ..++++|.+.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---- 343 (406)
T 1kmj_A 268 TKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH---- 343 (406)
T ss_dssp CCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC----
T ss_pred CCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC----
Confidence 000011111111 11 1222244555544578888899999999999999999999987553 6678888764321
Q ss_pred chhHHHHHHHHHHHHhcCCEEEEeee--------ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..++.+.|.++|+.+..+.. ++...++|+++. ..+|++|+++++++|+++.+.+
T Consensus 344 ------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 344 ------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ------HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence 34567777788855433321 122468999995 7789999999999999987754
No 37
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.94 E-value=6.2e-26 Score=228.11 Aligned_cols=340 Identities=12% Similarity=0.023 Sum_probs=224.9
Q ss_pred cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar 174 (499)
+.|++..+|..+.+.+...+.. . .++....+..++.+++++++|.+.+. ...++|+|||+|+..++.+..
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHC
T ss_pred ecCCCCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhcc
Confidence 4566655555555555443321 1 24566678888999999999997531 023458999999998887764
Q ss_pred HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
. ++..|+++...+++. ...+...|. +++.+|++.+ +.+|+++|+++++++ +.+|++
T Consensus 93 ~-----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~ 150 (376)
T 3f0h_A 93 T-----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEHG--KKLTKEKLYEYDNQN------FTGLLV 150 (376)
T ss_dssp C-----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCTT--CCCCHHHHHTTTTSC------CCEEEE
T ss_pred C-----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHHHhhccC------ceEEEE
Confidence 2 455566666655553 345677788 9999998753 589999999876432 447888
Q ss_pred ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842 253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL 332 (499)
Q Consensus 253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~ 332 (499)
+.++|++|.+.|+++|+++|++||+++|+|++++.+....+ ... . .+|++++++||++++|.|+|+++++++.
T Consensus 151 ~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~--~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~- 223 (376)
T 3f0h_A 151 NVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNE--C---GADVMITGSQKVLACPPGISVIVLAPRG- 223 (376)
T ss_dssp ESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHH--H---TCSEEEEETTTTTCCCSSCEEEEECHHH-
T ss_pred ecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-ccc--c---CccEEEecCcccccCCCceEEEEECHHH-
Confidence 88999999999999999999999999999999987643321 111 1 3799999999999988899998876642
Q ss_pred HHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCC--Cc---HHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhc
Q 010842 333 LVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRF--KS---LRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 333 l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~a---l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
...... ....+..... .........+..+ .. ..+..++..+... +++++.++..++++++.+.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (376)
T 3f0h_A 224 VERVEKSKVRTMYFDLK-------DALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD 296 (376)
T ss_dssp HHHHHTCCCCCSTTCHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhhcCCCCceeecHH-------HHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 222211 1111111000 0000000011111 12 3455566666555 6899999999999999999998
Q ss_pred CCCeEEEcCCC-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842 406 DPRFEIVVPRH-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 406 ~~~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
+ ++++..+.. ..++.+...+.. ..++.++|.++ |+.+..+....+..++|+++. ..+|++|+++++
T Consensus 297 ~-~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~-~~~t~e~i~~~~ 364 (376)
T 3f0h_A 297 L-PFELVSESPANGVTSVHPTTAN----------AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI-GALTHEDNTTLV 364 (376)
T ss_dssp S-SEEECCSSBBTTEEEEEESSSC----------HHHHHHHHHHHSSEECEECCGGGTTTCEEEECC-SSCCHHHHHHHH
T ss_pred c-CCccCccccCceEEEEeCCCCC----------HHHHHHHHHHhCCEEEecCccccCCCEEEEecC-CCCCHHHHHHHH
Confidence 7 677765433 334444432221 45677888887 754333322223467999995 678999999999
Q ss_pred HHHHHHHHH
Q 010842 484 ELIMEGADR 492 (499)
Q Consensus 484 ~~l~~~~~~ 492 (499)
++|+++.++
T Consensus 365 ~~l~~~l~~ 373 (376)
T 3f0h_A 365 NAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999988653
No 38
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.94 E-value=1e-25 Score=227.69 Aligned_cols=335 Identities=11% Similarity=0.070 Sum_probs=229.3
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|... ..++++++.+++++.+|.+... ...++|+|||+|+..++.+...
T Consensus 43 ~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~-------- 107 (391)
T 3dzz_A 43 PEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS-------- 107 (391)
T ss_dssp HHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC--------
Confidence 344555555555433444333 6889999999999999954221 1468999999999888877632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|. +++.+|++ .+++|.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 108 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~ 176 (391)
T 3dzz_A 108 ---PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYA 176 (391)
T ss_dssp ---TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBC
T ss_pred ---CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcc
Confidence 466799999999999999999999 99999986 3455779999999998631 24578889999999999
Q ss_pred ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCc--eeEeccccccc-CCCcceEEEEeCchhHHH
Q 010842 263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVD--SFSFSPHKWLL-SYLDCCCLWVKQPGLLVK 335 (499)
Q Consensus 263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aD--si~~~~hK~l~-~p~~~g~l~~r~~~~l~~ 335 (499)
+++++|+++|++||+++|+|++|+++.............. ...| .++.+.||+++ .+..+|++++++++...
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~- 255 (391)
T 3dzz_A 177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA- 255 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH-
T ss_pred cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH-
Confidence 8899999999999999999999987654321111111111 1245 88999999996 44678999887654332
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP 414 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~ 414 (499)
.+........ ...........+..++.. +.+.++++.++..++++++.+.|++ +|++++..+
T Consensus 256 ~~~~~~~~~~----------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 318 (391)
T 3dzz_A 256 RAEESFFLAG----------------IGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS 318 (391)
T ss_dssp HHHHHHHHHT----------------CSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC
T ss_pred HHHHHHHhhc----------------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc
Confidence 2211000000 000111112233333333 4566888899999999999999998 899988754
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.....+++.+.... ....++.++|. +.|+.+..+..+. +..++|++++ +++++|++++++|.++.+
T Consensus 319 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 319 NASYLAWVDISALG--------MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp CBSSEEEEECGGGC--------SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEehhhcC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 44334445554311 01456777775 6786544433332 3478999985 689999999999999877
Q ss_pred HH
Q 010842 492 RL 493 (499)
Q Consensus 492 ~l 493 (499)
++
T Consensus 388 ~~ 389 (391)
T 3dzz_A 388 NL 389 (391)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 39
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=6.4e-26 Score=229.15 Aligned_cols=332 Identities=16% Similarity=0.104 Sum_probs=227.5
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+..+
T Consensus 46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------- 112 (388)
T 1j32_A 46 KHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE-------- 112 (388)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence 344555555554333456555678999999999999998874221 2468999999999988887632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
++..|+++..+|.++..+++..|. +++.+|.+++.+|.+|+++|+++++++ +.+|+++.++|++|.+
T Consensus 113 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 180 (388)
T 1j32_A 113 ---PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVY 180 (388)
T ss_dssp ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence 456788899999999999999999 999999875434789999999998643 4478888899999999
Q ss_pred --CChhHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
+++++|+++|++||+++|+|++|+++...... ...........|.++.++||+++.| ..+|+++.+++ +.+.
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--~~~~ 258 (388)
T 1j32_A 181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP--LVKA 258 (388)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH--HHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH--HHHH
Confidence 45999999999999999999999876432111 1111000123789999999999644 33899887653 2222
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+. +.....+..+++...+ +.+.+++..++..++++++.+.|+++|++++..+
T Consensus 259 l~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 318 (388)
T 1j32_A 259 ATKIQGHS--------------------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP 318 (388)
T ss_dssp HHHHHHTT--------------------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC
T ss_pred HHHHHhhc--------------------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 21100000 0011234444444443 4566788888999999999999999889887643
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.....+++.+...+ ....++.++|.+ .|+.+..+..+....++|+++. +++++|+++++.|.++.+++
T Consensus 319 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 319 DGAFYMFPSIAKTG--------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CBTTEECCBCGGGT--------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCCCC--------CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 33222333332100 013567777765 5865444333433467999985 68999999999999988765
No 40
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.94 E-value=2.4e-26 Score=233.14 Aligned_cols=352 Identities=11% Similarity=0.038 Sum_probs=209.4
Q ss_pred CCccccccCCCCCChHHHHHHHHHHHc----ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842 88 LSPNFFAFFPATVSTAGFLGEMLCACF----NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS 163 (499)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 163 (499)
.+..|+++...++.++.++.. +...+ ......+..+.....+..++.+++++++|.+.+ ..++|+|||
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t 90 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADI-VLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGAT 90 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHH-HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHH
T ss_pred CCcEEecCCCCCCCCHHHHHH-HHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHH
Confidence 344566666555544544433 33322 111123444455667788899999999999754 469999999
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842 164 DSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEA 239 (499)
Q Consensus 164 ~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~ 239 (499)
+|+..++.+....... ++. .|+++...|+++...+..+ |+ +++.||++++ +.+|+++|+++|++
T Consensus 91 ~al~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~ 158 (400)
T 3vax_A 91 ESNNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGPS--GRISVEGVMERLRP 158 (400)
T ss_dssp HHHHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCTT--CCCCHHHHHTTCCT
T ss_pred HHHHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCCC--CCcCHHHHHHhcCC
Confidence 9999998877532111 355 7888999999988777664 77 8999998864 58999999999865
Q ss_pred HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842 240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319 (499)
Q Consensus 240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 319 (499)
+ +.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+.... ..... +|+++.++||+ ++|
T Consensus 159 ~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~--~d~~~~s~~K~-~g~ 224 (400)
T 3vax_A 159 D------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTP--IDMISISGHKI-GAP 224 (400)
T ss_dssp T------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSC--CSEEEEETGGG-TSC
T ss_pred C------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc-----Chhhc--CcEEEEeHHHh-CCC
Confidence 3 4589999999999999999999999999999999999997543211 12223 89999999995 557
Q ss_pred CcceEEE-EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHH
Q 010842 320 LDCCCLW-VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRL 395 (499)
Q Consensus 320 ~~~g~l~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~ 395 (499)
.|+|+++ ++++...... .....++..... ......+ ......+ ..++..+ .++++++.++..++
T Consensus 225 ~g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~ 292 (400)
T 3vax_A 225 KGVGALVTRRREEMDDER-VPLEPIMFGGGQ---------ERKLRPG-TLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDL 292 (400)
T ss_dssp SSCEEEEECBCSSSTTCB-CCCCCSSCSSCT---------GGGTSCS-CCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHH
T ss_pred CceEEEEEecchhccccc-cccCceecCCCc---------eeeeecC-CCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 7899999 8874221000 000111111000 0000111 1112222 2333332 35788899999999
Q ss_pred HHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeee----------EC-
Q 010842 396 AKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTI----------VG- 460 (499)
Q Consensus 396 a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~----------~~- 460 (499)
++++.+.|+ .+++++..++. .+++.|.+.... ...+.+.+. .-+...|..+..... ..
T Consensus 293 ~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~ 365 (400)
T 3vax_A 293 RSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD------AEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPE 365 (400)
T ss_dssp HHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC------HHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTTTCCH
T ss_pred HHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC------HHHHHHHHhcCcEEEecccccCCCCCccHHHHHcCCCc
Confidence 999999999 88999876543 357777765422 122333332 112233433332210 00
Q ss_pred --CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 461 --GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 461 --g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...++|+++++..+|++|+++++++|+++.++
T Consensus 366 ~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 366 EAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHTSEEEEEEEEC--------------------
T ss_pred cccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 02679999922778999999999999987653
No 41
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=3.2e-25 Score=221.12 Aligned_cols=322 Identities=12% Similarity=0.058 Sum_probs=220.0
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
++..+.+.+...+.. |..+.+...+++++.+|+++++|.+.+ ..++|+|||+|+..++.++++
T Consensus 26 ~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~------ 88 (359)
T 1svv_A 26 MHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR------ 88 (359)
T ss_dssp CCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC------
T ss_pred CCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHHHHhC------
Confidence 334455556665543 333445677889999999999997654 468999999999999888743
Q ss_pred hhhccCCeEEEcCCCCchhHHH--HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCccEEEEEecCCCc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAK--VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVPLFLCATVGTTS 258 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~vv~t~gtt~ 258 (499)
++..|+++..+|.++.. .++..|. +++.+|.+ ++.+|+++|++.++++. +.+..+.+|+++.+ |+
T Consensus 89 -----~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~p 156 (359)
T 1svv_A 89 -----PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TE 156 (359)
T ss_dssp -----TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CT
T ss_pred -----CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CC
Confidence 46689999999999888 4788899 99999985 36899999999997641 12334567888877 68
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCch--h
Q 010842 259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPG--L 332 (499)
Q Consensus 259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~--~ 332 (499)
+|.+.| +++|+++|++||+|+|+|++|.++.+..........++ ..+|++++++||+++ |.++|+++++++. .
T Consensus 157 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~-~~~~g~l~~~~~~~~~ 235 (359)
T 1svv_A 157 VGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG-MFGEALIILNDALKPN 235 (359)
T ss_dssp TSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC-SSCEEEEECSGGGCTT
T ss_pred CceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC-CCceEEEEEcccHHHH
Confidence 999988 99999999999999999999955432111110000000 148999999999855 7888998886532 1
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
+...... ..+.. ..+. ..... ....+...++++..++..++++++.+.| +.+++++.
T Consensus 236 ~~~~~~~-~~~~~-----------------~~~~--~~~~~--~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~ 292 (359)
T 1svv_A 236 ARHLIKQ-RGALM-----------------AKGW--LLGIQ--FEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLA 292 (359)
T ss_dssp HHHHHHH-TTCCC-----------------TTTH--HHHHH--HHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBS
T ss_pred HHHHHhc-CCccc-----------------ccch--hhHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEc
Confidence 1110000 00000 0000 01111 1223445667888899999999999999 56788876
Q ss_pred cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.+...+.+++.+. .++.++|.++ |+.+.. ....+..++|+++ +..++++|+++++++|+++.+
T Consensus 293 ~~~~~~~~~~~~~--------------~~~~~~l~~~~gi~v~~-~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 293 WPSASNQLFPILE--------------NTMIAELNNDFDMYTVE-PLKDGTCIMRLCT-SWATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp SCCSSSEECBEEE--------------HHHHHHHTTTEECEEEE-EETTTEEEEEEEC-CTTCCHHHHHHHHHHHHHC--
T ss_pred cCCccceEEEEcC--------------HHHHHHHHHhcCEEEEe-cccCCCceEEEEc-cCcCCHHHHHHHHHHHHHHHh
Confidence 5555555554431 3577888888 876522 1123568899997 477899999999999998765
Q ss_pred H
Q 010842 492 R 492 (499)
Q Consensus 492 ~ 492 (499)
+
T Consensus 357 ~ 357 (359)
T 1svv_A 357 S 357 (359)
T ss_dssp -
T ss_pred c
Confidence 4
No 42
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=1.9e-25 Score=223.36 Aligned_cols=314 Identities=12% Similarity=0.081 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~ 207 (499)
....++.+++++++|.+.+. ...++|+|||+|+..++.+++.. .+.+++.+...|.+ +..++..
T Consensus 37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~ 101 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL 101 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence 34455667789999843211 13699999999999988876421 12345555677876 6678888
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|+ +++.+|++.+ +.+|+++|+++|+++. .+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.
T Consensus 102 ~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~ 172 (366)
T 1m32_A 102 MGI---AHHAYDCGEV--ARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF 172 (366)
T ss_dssp HTC---CEEEEECCTT--SCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred hCC---ceEEEeCCCC--CCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 9999998754 5899999999997631 234677889999999999999999999999999999999975
Q ss_pred hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCCCc-ccCCC
Q 010842 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFKDW-QVGTG 365 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~-~~~~s 365 (499)
+....+ +... .+|+++.++||+++.|.|+|++++++. +.+.+... ..|..... ..+..+ .....
T Consensus 173 ~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 238 (366)
T 1m32_A 173 GGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVIAREQ--KLAACKGHSRSLSLDLY------AQWRCMEDNHGK 238 (366)
T ss_dssp TTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEEEEHH--HHTTCTTCCSCSTTCHH------HHHHHHHHTTTC
T ss_pred cCcCcc-----cccc-CccEEEecCcccccCCCceEEEEECHH--HHHhhcCCCCCccccHH------HHHhhhcccCCC
Confidence 533211 1111 379999999999988888999999864 22222111 11111000 000000 00011
Q ss_pred CCC--Cc---HHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCce-EEEEEecCC-CCCCcchh
Q 010842 366 RRF--KS---LRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFA-LVCFRLNPY-PHSGSADT 435 (499)
Q Consensus 366 r~~--~a---l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~-~v~f~~~~~-~~~~~~~~ 435 (499)
+++ .. ..+..++..+...| ++++.++..++++++.+.|++. +++++.+ +..+ +++|++... .
T Consensus 239 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------- 310 (366)
T 1m32_A 239 WRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ------- 310 (366)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-------
Confidence 112 11 23445555554455 7888999999999999999988 7776644 2334 677776530 1
Q ss_pred HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
....++.+.|.++|+.+ .+....+..++|+++. ..++++|+++++++|+++.+
T Consensus 311 -~~~~~~~~~l~~~gi~v-~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 311 -YRFSEFYRRLKEQGFVI-YPGKVSQSDCFRIGNI-GEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp -CCHHHHHHHHHHTTEEC-EECCCSSSCEEEEECC-SSCCHHHHHHHHHHHHHHCT
T ss_pred -CCHHHHHHHHHHCCEEE-ECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 01456777888888543 3332224567999995 77899999999999988754
No 43
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=2e-25 Score=226.80 Aligned_cols=342 Identities=11% Similarity=0.091 Sum_probs=222.8
Q ss_pred cccccCCCCCChHHHHHHHHHHHccc----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNS----VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI 166 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~ 166 (499)
.|+.+...++.++.+ .+.+...+.. ....|..++.......++.+++++++|.+.+ ..++|+|||+++
T Consensus 28 ~~ld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al 99 (406)
T 3cai_A 28 VHFDAPAGMLIPDSV-ATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVLL 99 (406)
T ss_dssp EECBGGGCCCCCHHH-HHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHHH
T ss_pred EEEeCCCcCCCCHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHHH
Confidence 466655444444443 3444443321 1123333344566777788889999998644 368999999988
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
..++.+.... . .++..|+++..+|.++..++.. .|. +++.+|++++ ++.+|+++|+++|+++
T Consensus 100 ~~~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~l~~~-- 165 (406)
T 3cai_A 100 SLLAEASSSR-A-------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIE-TGELPTWQWESLISKS-- 165 (406)
T ss_dssp HHHHHHTGGG-G-------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTT-TCCCCGGGHHHHCCTT--
T ss_pred HHHHHHHhhc-c-------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcc-cCCcCHHHHHHHhCCC--
Confidence 7766543110 0 1456788899999987665544 688 9999998732 3589999999998643
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+.+|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+....+ ... . .+|++++++||+++ |. +
T Consensus 166 ----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~--~---~~d~~~~s~~K~~g-~~-~ 233 (406)
T 3cai_A 166 ----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRE--T---DADVVTVNAHAWGG-PP-I 233 (406)
T ss_dssp ----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHH--H---CCSEEEEEGGGGTS-CS-C
T ss_pred ----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chh--c---CCCEEEeehhhhcC-CC-c
Confidence 45888999999999999999999999999999999999986543222 111 1 38999999999875 65 8
Q ss_pred e-EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CCCc-HHHHHHHHHhcHH--------------HH
Q 010842 323 C-CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RFKS-LRLWMVLRSYGVL--------------NL 385 (499)
Q Consensus 323 g-~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~~a-l~~~~~l~~~g~~--------------g~ 385 (499)
| +++++++ +.+.+.....+. +. . .......+. ...+ ..+..++..+... ++
T Consensus 234 G~~~~~~~~--~~~~l~~~~~~~-~~-----~----~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~ 301 (406)
T 3cai_A 234 GAMVFRDPS--VMNSFGSVSTNP-YA-----T----GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSM 301 (406)
T ss_dssp EEEEESCHH--HHHTSCCCCSCT-TC-----C----GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHH
T ss_pred CeEEEEehH--HHhhcCCcccCC-CC-----C----ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhH
Confidence 8 8877653 222222111011 00 0 000111111 1111 1223344433221 47
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee------
Q 010842 386 QSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT------ 457 (499)
Q Consensus 386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------ 457 (499)
+++.++..++++++.+.|+++|+++++.+. ..++++|++.... ..++.+.|.+.|+.+..+.
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~L~~~gi~v~~g~~~~~~~ 371 (406)
T 3cai_A 302 QSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP----------ADRVVQRLADNGILAIANTGSRVLD 371 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC----------HHHHHHHHHHTTEECEECCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC----------HHHHHHHHHHCCcEEecCChHHHHH
Confidence 888889999999999999999999887543 3567888775322 3567777777785443322
Q ss_pred eE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 458 IV---GGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 458 ~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+ .+..++|+++. ..+|++|+++++++|+++
T Consensus 372 ~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 372 VLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred HcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence 11 12467999995 778999999999998764
No 44
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=3.2e-25 Score=223.88 Aligned_cols=315 Identities=13% Similarity=0.117 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH---
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV--- 204 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka--- 204 (499)
.....++.+.+++++|.+.+ ..++|+|||+|+..++.+.+-. ++..|+++..+|.++..+
T Consensus 58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~ 120 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA 120 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence 34556677779999998654 3689999999998888776311 456788899999986543
Q ss_pred -HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHH----HhCCEE
Q 010842 205 -CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVAN----EYGIWV 279 (499)
Q Consensus 205 -~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~----~~~~~l 279 (499)
++..|. +++.+|++...++.+|+++|+++|+++ +.+|+++.++|++|.+.|+++|.++|+ ++|+++
T Consensus 121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l 191 (390)
T 1elu_A 121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV 191 (390)
T ss_dssp HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence 677899 999999863224689999999988643 457889999999999999999999999 999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~ 358 (499)
|+|++|+.+....+ +.. ...|+++.++|||+++|.++|+++++++. . +.+... ..+-...........++.
T Consensus 192 i~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~ 263 (390)
T 1elu_A 192 LVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC-L-GEINPTYVGWRSITYGAKGEPTGWA 263 (390)
T ss_dssp EEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTTT-G-GGCCCCSCCTTTEEECTTSCEEEEC
T ss_pred EEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEEECHHh-H-hhcCCccccCCcccccccCcccccc
Confidence 99999975432211 111 24799999999999999999999997642 2 222110 000000000000000000
Q ss_pred C--cccCCCCCC--CcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCC
Q 010842 359 D--WQVGTGRRF--KSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSG 431 (499)
Q Consensus 359 ~--~~~~~sr~~--~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~ 431 (499)
+ .....+... ....+..++..+...+ ++++.++..++++++.+.|+++|+++++.+ +..++++|++....
T Consensus 264 ~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 340 (390)
T 1elu_A 264 EGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL--- 340 (390)
T ss_dssp SGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS---
T ss_pred cchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC---
Confidence 0 011111111 1123445666554445 888999999999999999999989988753 45678888774211
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...++.++|.++|+.+..+. +..++|+++ +..++++|+++++++|+++
T Consensus 341 ------~~~~~~~~l~~~gi~v~~~~---~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 341 ------GHRAIVQKLEEQRIYLRTIA---DPDCIRACC-HYITDEEEINHLLARLADF 388 (390)
T ss_dssp ------CHHHHHHHHHHTTEECEEET---TTTEEEEEC-CTTCCHHHHHHHHHHHTTC
T ss_pred ------CHHHHHHHHHHCCEEEEecC---CCCeEEEec-ccCCCHHHHHHHHHHHHhh
Confidence 13567777777785443322 346799998 4778999999999998764
No 45
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.7e-24 Score=218.79 Aligned_cols=332 Identities=12% Similarity=0.103 Sum_probs=220.1
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|..++...++|++ +++++|.+.. +++++||+|+..++.+.+-.
T Consensus 18 ~~~~a~~~~l~~~~~~~~~~~~~~~l~~~----la~~~~~~~~---------i~~~sGt~al~~~l~~l~~~-------- 76 (388)
T 1b9h_A 18 AERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAHA---------LAVTNGTHALELALQVMGVG-------- 76 (388)
T ss_dssp HHHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSEE---------EEESCHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHcCCC--------
Confidence 34445555554332345556667777776 7788887643 66666799999888776211
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++..+|.++..+++..|+ +++.+|++++ +|.+|+++|+++|++++ .+|+ +++++|.+.|
T Consensus 77 --~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~ 141 (388)
T 1b9h_A 77 --PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRT------KVIM---PVHMAGLMAD 141 (388)
T ss_dssp --TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTE------EEEC---CBCGGGCCCC
T ss_pred --CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCc------eEEE---EeCCccCcCC
Confidence 456789999999999999999999 9999999864 37899999999986432 2444 7889999999
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh--HHHhhcCCcc
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL--LVKALSTDPE 342 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~--l~~~~~~~~~ 342 (499)
+++|+++|++||+++|+|++|+.+...... . ...+..+++.+++.||++.++ .+|+++.+++.. +....... .
T Consensus 142 l~~i~~la~~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~ 216 (388)
T 1b9h_A 142 MDALAKISADTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-S 216 (388)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-B
T ss_pred HHHHHHHHHHcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-h
Confidence 999999999999999999999865432111 1 112224788889999999765 568888776533 32221111 0
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-----C-C
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-----R-H 416 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-----~-~ 416 (499)
+ .... ....+.......+.+...+..++.+.. .+.+++.+++..++++++.+.|+++|++++..+ + .
T Consensus 217 ~-~~~~----~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 289 (388)
T 1b9h_A 217 C-GRPR----DDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNS 289 (388)
T ss_dssp T-TCCT----TCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCC
T ss_pred C-CCCc----cCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccc
Confidence 0 0000 000010001111112334444444333 356778888888999999999999999987752 2 2
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eE--C--------------------------CEEEEEE
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IV--G--------------------------GLYMLRF 467 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~--------------------------g~~~lRi 467 (499)
.+++++++.+.. .....++.+.|.++|+.+.... .. . ....+|+
T Consensus 290 ~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 362 (388)
T 1b9h_A 290 HYMAMFRIPGLT-------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWL 362 (388)
T ss_dssp CSEEEEECTTCC-------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEE
T ss_pred eEEEEEEeCCcC-------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEe
Confidence 467777775421 1224667888888887543321 10 0 0136999
Q ss_pred eccCCCC-cHHHHHHHHHHHHHHHHH
Q 010842 468 AVGASLT-DERHVVAAWELIMEGADR 492 (499)
Q Consensus 468 ~~~~~~~-t~~di~~l~~~l~~~~~~ 492 (499)
++. +.+ |++||++++++|+++.++
T Consensus 363 ~~~-~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 363 HHR-VLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp EGG-GGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 994 788 999999999999988754
No 46
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=2.9e-24 Score=220.00 Aligned_cols=301 Identities=12% Similarity=0.070 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.....++.+++++++|.+.. +++++||+||..++.+... ++..|+++...|.++..+++.
T Consensus 108 ~~~~~~l~~~la~~~g~~~~---------i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~ 167 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTGA---------IVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ 167 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCce---------EEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 45666677778999988643 8888899999887776522 466788899999999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|. +++.+| .+|+++|++++++... ..+.+|+++.++|++|.+.|+++|+++|++||+++++|++|++
T Consensus 168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~ 235 (427)
T 2w8t_A 168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM 235 (427)
T ss_dssp SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence 998 888776 3589999999875211 1456888889999999999999999999999999999999988
Q ss_pred hhccCccchhhh--cCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCCCcccC
Q 010842 288 SACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 288 ~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+.+. +..+... .++ ..+|+++.++||+++.| | |+++.++. .. +.+... ..|...
T Consensus 236 ~~~~-~~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v~~~~~-l~-~~l~~~~~~~~~~----------------- 293 (427)
T 2w8t_A 236 GFFG-PNGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFVVSNHP-KF-EAVRLACRPYIFT----------------- 293 (427)
T ss_dssp TTSS-TTSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEEEECCT-TG-GGGGGTCHHHHSS-----------------
T ss_pred cccC-CCCCchHhhcCCCcCCcEEEecchhhhccC-C-CEEEeCHH-HH-HHHHHhccccccc-----------------
Confidence 6543 1111111 222 35799999999999843 4 88877643 22 222211 112111
Q ss_pred CCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCcchhHHHH
Q 010842 364 TGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 364 ~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
+ ....+.+ ..+++.+ +.++++.++..++++++.+.|++. ++++..++ ..+++++.+.. ....
T Consensus 294 ~--~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---------~~~~ 359 (427)
T 2w8t_A 294 A--SLPPSVVATATTSIRKL--MTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED---------QEQA 359 (427)
T ss_dssp C--CCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS---------HHHH
T ss_pred C--CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC---------HHHH
Confidence 1 1122222 2344443 224678888899999999999987 88876455 66777777743 2335
Q ss_pred HHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 440 RKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
.++.++|.++|+.+..... ..+..++|+++. ..+|++||++++++|+++.+++.+..
T Consensus 360 ~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~-~~~t~e~i~~~~~~l~~~l~~~~~~~ 419 (427)
T 2w8t_A 360 AMMWQALLDGGLYVNMARPPATPAGTFLLRCSIC-AEHTPAQIQTVLGMFQAAGRAVGVIG 419 (427)
T ss_dssp HHHHHHHHHTTEECEEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeC-CCCCHHHHHHHHHHHHHHHHHhCccc
Confidence 6788888888854433221 124578999995 77899999999999999988876543
No 47
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.94 E-value=4.2e-25 Score=224.71 Aligned_cols=330 Identities=11% Similarity=0.043 Sum_probs=224.1
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|...++..++++++.+|+.+.+|++... ...++|+|||+|+..++.+...
T Consensus 58 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~--------- 123 (406)
T 1xi9_A 58 HMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD--------- 123 (406)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC---------
Confidence 34444444444333345555667899999999999988764321 2569999999999988877632
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++..+|.++..+++..|+ +++.+|++++++|.+|+++|+++++++ +.+|+++.++|++|.+-|
T Consensus 124 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~ 192 (406)
T 1xi9_A 124 --PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYD 192 (406)
T ss_dssp --TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcC
Confidence 456788899999999999999999 999999875334789999999998642 446778889999999855
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCC-ceeEecccccccCC-CcceEEE--EeCc---hhH
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERV-DSFSFSPHKWLLSY-LDCCCLW--VKQP---GLL 333 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~a-Dsi~~~~hK~l~~p-~~~g~l~--~r~~---~~l 333 (499)
+++|+++|++||+|+++|++|+++.. ...... +..+ ... |.++.++||+++.| ..+|+++ .++. +..
T Consensus 193 ~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~ 270 (406)
T 1xi9_A 193 KKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHIS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR 270 (406)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCC-HHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHH
Confidence 99999999999999999999988654 211111 1111 235 77888999999743 3478888 4331 322
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 411 (499)
+.+.....+.. + ...+..+++...+ +.++++++.++..++++++.+.|+++|++++
T Consensus 271 -~~l~~~~~~~~-------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 328 (406)
T 1xi9_A 271 -EAIDRLARIRL-------------------C--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 328 (406)
T ss_dssp -HHHHHHHHHTC-------------------C--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred -HHHHHHHHhhc-------------------C--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 22211111100 0 0123333333333 4456788888899999999999999989887
Q ss_pred EcCCCceEEEE-EecCC-CCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 412 VVPRHFALVCF-RLNPY-PHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 412 ~~~~~~~~v~f-~~~~~-~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
.. +..+.++| .+... + . ...++.++|. +.|+.+..+..+. +..++|+++. +++++|++++++|
T Consensus 329 ~~-~~~~~~~~~~~~~~~~----~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~~~~l 396 (406)
T 1xi9_A 329 TK-PQGAFYIFPKIEVGPW----K----NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRF 396 (406)
T ss_dssp CC-CCBSSEECCEECSCSC----S----SHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHH
T ss_pred ec-CCeeEEEEEecCccCC----C----CHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHHHHHH
Confidence 64 44344443 45321 1 0 1355677776 6785544433332 2467999985 7899999999999
Q ss_pred HHHHHHHhc
Q 010842 487 MEGADRLFK 495 (499)
Q Consensus 487 ~~~~~~l~~ 495 (499)
.++.+++.+
T Consensus 397 ~~~l~~~~~ 405 (406)
T 1xi9_A 397 EKFMKERLK 405 (406)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhc
Confidence 999877643
No 48
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=2.3e-25 Score=224.49 Aligned_cols=352 Identities=13% Similarity=0.070 Sum_probs=227.3
Q ss_pred ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT 169 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a 169 (499)
|+++.+.|++...+..+.+.+...... .+ +|.......+++++++++++..... .....++|+|||+|+..+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence 456777777776665555555443321 12 5555556666788899998874210 001468999999999998
Q ss_pred HHHHHHHHHhHhhhhccCCeEEEcCCC--CchhHHHHHHHhCCCCCCeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842 170 LIAARDRALDAVGAENMHKLVVYGSDQ--THSTFAKVCKLAGVSPANIRALPT-SVDANFSLSPQLLRRAVEADVEAGLV 246 (499)
Q Consensus 170 l~~ar~~~~~~~~~~g~~~~~i~~s~~--~H~s~~ka~~~~G~g~~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~ 246 (499)
+.+..... .++..|++... .|.++.++++..|+ +++.||+ +. ++.+|+++|+++|++. .
T Consensus 76 ~~~~~~~~--------~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~ 137 (385)
T 2bkw_A 76 ASNFILSK--------APNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S 137 (385)
T ss_dssp HHHHSCTT--------CSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred HHHHhccC--------CCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence 88763100 13445544433 34455577888899 9999998 64 3589999999999761 1
Q ss_pred cEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842 247 PLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC 324 (499)
Q Consensus 247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 324 (499)
+.+|++++++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+ +... .+|++++++|||+++|.|+|+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~ 211 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSI 211 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceE
Confidence 34788899999999999999999999999 999999999975433211 1111 379999999999998889999
Q ss_pred EEEeCchhHHHhhc-----CCccCCCCCCCCCCCcccC-CCcccC-CCC--CCC---cHHHHHHHHHhcHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALS-----TDPEYLKNKPSESNSVVDF-KDWQVG-TGR--RFK---SLRLWMVLRSYGVLNLQSHIRSD 392 (499)
Q Consensus 325 l~~r~~~~l~~~~~-----~~~~yl~~~~~~~~~~~~~-~~~~~~-~sr--~~~---al~~~~~l~~~g~~g~~~~~~~~ 392 (499)
++++++. +.+.+. ....|..... ..... ..+... ..+ ... ...+..+++.+...+++++.++.
T Consensus 212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 286 (385)
T 2bkw_A 212 SLCSSRF-MDYALNDSKNGHVHGYFSSLR----RWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLH 286 (385)
T ss_dssp EEECHHH-HHHHTCHHHHCCCSCSTTCHH----HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred EEEcHHH-HHHHHhhccCCCCCceeecHH----HHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 9987643 221221 0111110000 00000 000000 001 011 12344555555455688889999
Q ss_pred HHHHHHHHHHH-hcCCCeEEEcC-C----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--CCEEE
Q 010842 393 IRLAKMFEGFV-KSDPRFEIVVP-R----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--GGLYM 464 (499)
Q Consensus 393 ~~~a~~l~~~L-~~~~~~~~~~~-~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~ 464 (499)
.++++++.+.| +++ +++++.+ + ..++++|++.. ..++.++|.++|+. +.+... .+..+
T Consensus 287 ~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~-v~~g~~~~~~~~~ 352 (385)
T 2bkw_A 287 REMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD------------PPDVIAFLKSHGVV-IAGGIHKDIGPKY 352 (385)
T ss_dssp HHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC------------HHHHHHHHHHTTEE-CBCCCCTTTGGGE
T ss_pred HHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC------------HHHHHHHHHHCCeE-EeCCCCcccCCCE
Confidence 99999999999 888 8887742 1 35677777632 35677777777744 333221 13468
Q ss_pred EEEe-cc-C-CCCcHHHHHHHHHHHHHHHHH
Q 010842 465 LRFA-VG-A-SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 465 lRi~-~~-~-~~~t~~di~~l~~~l~~~~~~ 492 (499)
+|++ +. + ..+|++|+++++++|+++.++
T Consensus 353 iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 353 IRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 9999 53 1 247999999999999987543
No 49
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=3.4e-25 Score=225.63 Aligned_cols=327 Identities=13% Similarity=0.082 Sum_probs=228.7
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+ ..+......|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 60 ~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~--------- 124 (409)
T 2gb3_A 60 VFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN--------- 124 (409)
T ss_dssp HHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC---------
Confidence 345555 6665433456656667899999999999988864321 2469999999999998887632
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC-
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD- 263 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id- 263 (499)
++..|+++..+|.++..+++..|. +++.+|.++++++.+ +++|+++++++ +.+|+++.++|++|.+-
T Consensus 125 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~ 192 (409)
T 2gb3_A 125 --PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYG 192 (409)
T ss_dssp --TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcC
Confidence 456788899999999999999999 999999875334666 88998887542 44778889999999984
Q ss_pred --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
++++|+++|++||+++++|++|+++.... .....+.++...|+++.++||+++.| ..+|++++++++.. +.+...
T Consensus 193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~-~~l~~~ 270 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELI-SHAMKL 270 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHH-HHHHHH
Confidence 58999999999999999999998764321 11222334445799999999999744 34899988773322 222110
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
..+. + ....+..+++...+ +.++++++.++..++++++.+.|++. +++++..+..+
T Consensus 271 ~~~~--------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 328 (409)
T 2gb3_A 271 AQGR--------------------L-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGA 328 (409)
T ss_dssp HHHS--------------------C-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBS
T ss_pred Hhcc--------------------C-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCee
Confidence 0000 0 11233344444444 56778888899999999999999988 78772234433
Q ss_pred E-EEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCEEEEeeeE-----CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 419 L-VCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRVYLTHTIV-----GGLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 419 ~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
. +++++.... ..++.++|.++ |+.+..+..+ .+..++|+++. +++++|++++++|
T Consensus 329 ~~~~~~~~~~~----------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~~~~~l 395 (409)
T 2gb3_A 329 FYITAELPVED----------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDVL 395 (409)
T ss_dssp SEEEEECSSSC----------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHHH
T ss_pred EEEEEEeCCCC----------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHHHHHHH
Confidence 3 444553211 35677777766 7544433333 23568999985 7999999999999
Q ss_pred HHHHHHHhc
Q 010842 487 MEGADRLFK 495 (499)
Q Consensus 487 ~~~~~~l~~ 495 (499)
+++.+++.+
T Consensus 396 ~~~l~~~~~ 404 (409)
T 2gb3_A 396 MEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhh
Confidence 999887754
No 50
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.93 E-value=1.9e-25 Score=222.60 Aligned_cols=303 Identities=15% Similarity=0.090 Sum_probs=207.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH--
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-- 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-- 204 (499)
...++.++.+|+++++| ++. ..++|+|||+|+..++.+++. ++..|+++..+|++...+
T Consensus 41 ~~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~ 101 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGA 101 (356)
T ss_dssp CSHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTH
T ss_pred cchHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchH
Confidence 34567778888999999 432 358999999999998887642 567888899999998877
Q ss_pred HHHh--CCCCCCeEEeeCCCCCCCccCHHHHHH-HHHHHH-HcCCccEEEEEecCCCcccc---cCChhHHHHHHHHhCC
Q 010842 205 CKLA--GVSPANIRALPTSVDANFSLSPQLLRR-AVEADV-EAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANEYGI 277 (499)
Q Consensus 205 ~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~-~~g~~p~~vv~t~gtt~~G~---id~l~~I~~ia~~~~~ 277 (499)
+..+ |. +++.+|.+ ++.+|+++|++ ++++.. ..+.++.+|+++.+++ +|. .+++++|+++|++||+
T Consensus 102 ~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~ 174 (356)
T 1v72_A 102 PEFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSL 174 (356)
T ss_dssp HHHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCC
Confidence 7777 88 89999875 25899999999 886421 1122466788888664 999 6789999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
|+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++.++ +...+ +.....+. +.
T Consensus 175 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~-~~~~~-~~~~~~~~-~~--------- 241 (356)
T 1v72_A 175 GLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNT-SLATE-MSYRRKRA-GH--------- 241 (356)
T ss_dssp EEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSG-GGHHH-HHHHHHHT-TC---------
T ss_pred eEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECH-HHHhh-HHHHhhcc-Cc---------
Confidence 9999999975432111111111111 2589999999999 5688888887743 32221 11000000 00
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
. ...........+..+..+.+.++.++..++++++.+.|++++++++..++..+.+++++.
T Consensus 242 -------~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----------- 302 (356)
T 1v72_A 242 -------L-SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----------- 302 (356)
T ss_dssp -------C-CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----------
T ss_pred -------h-hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----------
Confidence 0 000122233344555445566778888999999999999988999876666677766652
Q ss_pred HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++.++|.++|+.+..+. +. ..++|+++ +..+|++|+++++++|+++.++.
T Consensus 303 ---~~~~~~l~~~gi~v~~g~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 303 ---SAMIDALLKAGFGFYHDR-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ---HHHHHHHHHTTCBCBCSS-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC---
T ss_pred ---HHHHHHHHhcCeEEeccc-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 146677777786543322 32 46799997 47889999999999999876543
No 51
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.93 E-value=1.4e-24 Score=219.39 Aligned_cols=324 Identities=11% Similarity=0.087 Sum_probs=223.8
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
..+.+.+...+......|.. ...++++++.+++++.+|. +.+ ..++|+|||+|+..++.+..+
T Consensus 48 ~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~-------~v~~~~g~~~a~~~~~~~~~~------ 112 (391)
T 4dq6_A 48 PCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE-------WLIYSPGVIPAISLLINELTK------ 112 (391)
T ss_dssp HHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG-------GEEEESCHHHHHHHHHHHHSC------
T ss_pred HHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH-------HeEEcCChHHHHHHHHHHhCC------
Confidence 34455555555543344433 3588999999999999994 333 469999999999888877632
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++..|+++..+|.++..+++..|. +++.+|++ .+++|.+|+++|++++++ +.+|+++.++|++
T Consensus 113 -----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~npt 177 (391)
T 4dq6_A 113 -----ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPV 177 (391)
T ss_dssp -----TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTT
T ss_pred -----CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCC
Confidence 456788999999999999999999 99999988 556688999999999865 3478888999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC----CCCceeEecccccccC-CCcceEEEEeCch
Q 010842 260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI----ERVDSFSFSPHKWLLS-YLDCCCLWVKQPG 331 (499)
Q Consensus 260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~----~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~ 331 (499)
|.+ +++++|+++|++||+++++|++|+.+......... +..+ .....++.+.||+++. ...+|+++.+++.
T Consensus 178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 256 (391)
T 4dq6_A 178 GRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK 256 (391)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence 999 78999999999999999999999875432111111 1111 0133778899999973 4568888887644
Q ss_pred hHHHhhcCC-ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010842 332 LLVKALSTD-PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DP 407 (499)
Q Consensus 332 ~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~ 407 (499)
.. +.+... ..+... ....+...++...+ +.+.++++.++..++++++.+.|++ +|
T Consensus 257 ~~-~~~~~~~~~~~~~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 315 (391)
T 4dq6_A 257 DY-KLLDDAFTRIDIK--------------------RNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMP 315 (391)
T ss_dssp HH-HHHHHHHHHTTCC--------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HH-HHHHHHHHhhcCC--------------------CCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 32 222110 000000 01223333333322 3456788888999999999999988 78
Q ss_pred CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHH
Q 010842 408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
++++..+.....+++.+.... ....++.++|.++ |+.+..+..+. +..++|++++ +++++|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~ 384 (391)
T 4dq6_A 316 KLKVRKPEGTYLLWVDFSALG--------LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA---CPRSMLEEALI 384 (391)
T ss_dssp TSEECCCSBSSEEEEECGGGC--------CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC---SCHHHHHHHHH
T ss_pred CCEecCCCccEEEEEEhhhcC--------CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc---CCHHHHHHHHH
Confidence 998875443333345654311 0145678888887 75444433332 3478999986 68899999999
Q ss_pred HHHHHH
Q 010842 485 LIMEGA 490 (499)
Q Consensus 485 ~l~~~~ 490 (499)
+|.++.
T Consensus 385 ~l~~~l 390 (391)
T 4dq6_A 385 RIKNAI 390 (391)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 52
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.93 E-value=1.4e-25 Score=224.92 Aligned_cols=300 Identities=14% Similarity=0.117 Sum_probs=212.4
Q ss_pred hHHHHHHHHHH-HHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 127 STELEIVVMDW-LATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 127 ~~~lE~~~~~~-la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
......++.++ +++++|.+ . .++|+|||+|+..++.++.. ++..|+++..+|+++..++
T Consensus 51 ~~~~~~~l~~~~la~~~~~~-~--------v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~ 110 (371)
T 2e7j_A 51 KTPPIHDFIHNQLPKFLGCD-V--------ARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAA 110 (371)
T ss_dssp --CCHHHHHHTHHHHHTTSS-E--------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCC-E--------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHH
Confidence 34456677888 99999987 4 48999999999998887732 4668999999999999999
Q ss_pred HHhCCCCCCeEEee--CCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 206 KLAGVSPANIRALP--TSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 206 ~~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
+..|+ +++.+| .+++ +.+|+++|++++++.... ..+.+|+++.++|++|.+.|+++|.++|++||+|+|+|+
T Consensus 111 ~~~g~---~~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~ 184 (371)
T 2e7j_A 111 ERAGL---NIALVPKTDYPD--YAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNG 184 (371)
T ss_dssp HHTTC---EEEEECCCCTTT--CCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC
T ss_pred HHcCC---eEEEeecccCCC--CCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEEC
Confidence 99999 999999 7653 699999999999754221 245689999999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHh-hcCC-ccCCCCCCCCCCCcccCCCcc
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA-LSTD-PEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~-~~~~-~~yl~~~~~~~~~~~~~~~~~ 361 (499)
+|+.+....+ ... . .+|++++++||+++.|.++|+++++++. . +. +... ..+.. +..
T Consensus 185 a~~~~~~~~~-~~~--~---~~di~~~s~sK~~~~~~~~G~~~~~~~~-~-~~~~~~~~~~~~~-------------~~~ 243 (371)
T 2e7j_A 185 AYAIGRMPVS-LKE--I---GADFIVGSGHKSMAASGPIGVMGMKEEW-A-EIVLRRSEKYKNK-------------EVE 243 (371)
T ss_dssp TTTBTTBCCC-HHH--H---TCSEEEEEHHHHSSCCSSCEEEEECTTT-T-TTTTCBCSSCTTS-------------BGG
T ss_pred ccccCCCCCC-hhh--c---CCCEEEecCCcCCCCCCCcEEEEEechh-h-hhhccccccCccc-------------ccc
Confidence 9988654211 111 1 3789999999999998899999998642 1 11 1110 00110 000
Q ss_pred cCCCCCCCcH---HHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842 362 VGTGRRFKSL---RLWMVLRSYGVLNLQSHIRSD--IRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 362 ~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~--~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~ 434 (499)
...+. .... .+..+++.+.. ++.++. .++++++.+.|++. +++++.++ ..+++++++. .
T Consensus 244 ~~~~~-~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~------ 309 (371)
T 2e7j_A 244 LLGCT-ARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V------ 309 (371)
T ss_dssp GTTCC-CCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H------
T ss_pred cccCC-cCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C------
Confidence 01111 1122 22233433321 566677 88999999999988 89887553 4667777663 1
Q ss_pred hHHHHHHHHHHHHhcCCEEEEeeeE-C---C--EEEEE-EeccCCC-CcHHHHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVNSTGRVYLTHTIV-G---G--LYMLR-FAVGASL-TDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 435 ~~~~~~~l~~~l~~~g~~~~~~~~~-~---g--~~~lR-i~~~~~~-~t~~di~~l~~~l~~~~~~l 493 (499)
..++.+.|.+.|+.+. +... . + ..++| +++. .. ++++|+++++++|+++.+++
T Consensus 310 ----~~~~~~~l~~~gi~~~-~~~~~~~~~g~~~~~iRii~~~-~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 310 ----LYEISKKAKGGRFFLY-RELKSRKIHGIKPGLTRYFKLS-TYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp ----HHHHHHHSSSGGGHHH-HHHHHTTEECSCTTCCSEEEEE-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHCCEEEE-eccccccccCCCCCceEEEEee-ccCCCHHHHHHHHHHHHHHHHhc
Confidence 3556777777775432 2111 0 2 45799 9995 55 89999999999999987653
No 53
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=1e-24 Score=220.46 Aligned_cols=331 Identities=13% Similarity=0.053 Sum_probs=225.1
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCcc-EEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGG-GVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~-g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... .. .++|+|||+|+..++.+..+
T Consensus 42 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------- 109 (389)
T 1gd9_A 42 QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK------- 109 (389)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC-------
Confidence 345555555554333445555567899999999999988863211 14 69999999999888876532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|+ +++.+|++++++|.+|+++|+++++++ +.+|+++.++|+||.+
T Consensus 110 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~ 176 (389)
T 1gd9_A 110 ----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAV 176 (389)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcC
Confidence 456788899999999999999999 999999875334789999999988642 4467788999999999
Q ss_pred C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
- ++++|+++|++||+++++|++|+++.......... +.+....|.++.++||+++.| ..+|++++++ ... +.
T Consensus 177 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~ 254 (389)
T 1gd9_A 177 LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WII-ER 254 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHH-HH
Confidence 6 59999999999999999999998865421111111 112234789999999998744 4479988864 222 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVL--NLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
+.....+... ....+..+++...+ +.+ +++++.++..++++++.+.|++. ++++.
T Consensus 255 l~~~~~~~~~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 313 (389)
T 1gd9_A 255 MVKFQMYNAT--------------------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTV 313 (389)
T ss_dssp HHHHHTTTTC--------------------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCC
T ss_pred HHHHHhhhcc--------------------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 2111111000 01123333333333 234 67888888999999999999988 77766
Q ss_pred cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+.....+++.+.... ....++.++|. +.|+.+..+..+. +..++|++++ .++++|+++++.|.++
T Consensus 314 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~ 382 (389)
T 1gd9_A 314 KPKGAFYIFPRIRDTG--------LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA---TAYEKLEEAMDRMERV 382 (389)
T ss_dssp CCCBTTEECCBCGGGT--------CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHH
T ss_pred CCCeeeEEEEeccCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 4333333444553211 01356777776 6785544433332 2467999986 2889999999999988
Q ss_pred HHHH
Q 010842 490 ADRL 493 (499)
Q Consensus 490 ~~~l 493 (499)
.++.
T Consensus 383 ~~~~ 386 (389)
T 1gd9_A 383 LKER 386 (389)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 7653
No 54
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=2.1e-24 Score=218.89 Aligned_cols=334 Identities=11% Similarity=0.048 Sum_probs=225.6
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|... ..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 47 ~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~-------- 111 (399)
T 1c7n_A 47 PELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK-------- 111 (399)
T ss_dssp HHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence 345555555543323344433 7889999999999988853211 1468999999999888876632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|. +++.+|.+ ++++|.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 112 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~ 180 (399)
T 1c7n_A 112 ---PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRV 180 (399)
T ss_dssp ---TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBC
T ss_pred ---CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcC
Confidence 456788899999999999999999 99999986 3345779999999998621 24467788999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC----CCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI----ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~----~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
-| +++|+++|++||+++++|++|+++......... +..+ ...+.++.+.+|+++.| ..+|++++++++...
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 259 (399)
T 1c7n_A 181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRE 259 (399)
T ss_dssp CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHH
Confidence 88 999999999999999999999876432111111 1111 12457788999999744 457999987654332
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEI 411 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~ 411 (499)
........+-. + ....+..+++...+ +.+.+++..++..++++++.+.|++ +|++++
T Consensus 260 ~l~~~~~~~~~-------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 319 (399)
T 1c7n_A 260 RFTKSRDATSG-------------------M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA 319 (399)
T ss_dssp HHHHHHHHTTC-------------------C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred HHHHHHhhccc-------------------C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 21111111100 0 01233444443333 3567888888899999999999998 888876
Q ss_pred EcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 412 VVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 412 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
.. +..+.+ ++.+.... ....++.+.|. +.|+.+..+..+. +..++|++++. ++++|+++++.|.
T Consensus 320 ~~-~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~l~~~l~~l~ 387 (399)
T 1c7n_A 320 PL-IEGTYLQWIDFRALK--------MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA---PSSVIQESLERLN 387 (399)
T ss_dssp CC-CSBSSEEEEECGGGC--------CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHH
T ss_pred ec-CCceEEEEEEcccCC--------CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc---CHHHHHHHHHHHH
Confidence 54 444444 45664310 01356777886 6787655443332 34689999963 3789999999999
Q ss_pred HHHHHHhcc
Q 010842 488 EGADRLFKG 496 (499)
Q Consensus 488 ~~~~~l~~~ 496 (499)
++.+++.+.
T Consensus 388 ~~l~~~~~~ 396 (399)
T 1c7n_A 388 KALKDLKNR 396 (399)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhc
Confidence 998877543
No 55
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=6.4e-24 Score=215.05 Aligned_cols=301 Identities=12% Similarity=0.080 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.....++.+++++++|.+.. +++++||+|+..++.+..+ ++..|+++..+|.++..+++.
T Consensus 87 ~~~~~~l~~~la~~~~~~~~---------i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~ 146 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDDT---------ILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL 146 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHCCCcE---------EEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 45556667779999998753 7777789999887765532 567899999999999999999
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|. +++.+|. +|+++|++.+++....+..+.+|+.+.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~ 216 (399)
T 3tqx_A 147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV 216 (399)
T ss_dssp CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 8888875 477899999988665555678899999999999999999999999999999999999974
Q ss_pred hhccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 288 SACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 288 ~~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
+... ..... ...++ ...|+++.+.||+++++.| |+++.++. ...........|....
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~-~~~~~~~~~~~~~~~~----------------- 276 (399)
T 3tqx_A 217 GFIG-ENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKE-IIEWLRNRSRPYLFSN----------------- 276 (399)
T ss_dssp TTSS-TTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHH-HHHHHHHHCHHHHSSC-----------------
T ss_pred cccC-CCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHH-HHHHHHHhCcceeccC-----------------
Confidence 3321 11111 12222 3579999999999985544 77776543 2222212122222110
Q ss_pred CCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 365 GRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 365 sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
....+.+.+.+..+. .+++++..++..++++++.+.|++. ++++. ++..+++++.+.. .....++
T Consensus 277 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~~ 343 (399)
T 3tqx_A 277 --TVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD---------AQLATNM 343 (399)
T ss_dssp --CCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC---------HHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHH
Confidence 112233333333322 1567888899999999999999987 77765 5666777777653 2235678
Q ss_pred HHHHHhcCCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.++|.++|+.+. +.. ..+..++|+++. ..++++|+++++++|+++.+++
T Consensus 344 ~~~l~~~gi~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 344 ADHLLQEGIYVV-GFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHTTEECC-EECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCEEe-eeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence 888888885443 332 234578999995 7889999999999999998765
No 56
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1.4e-24 Score=219.52 Aligned_cols=324 Identities=12% Similarity=0.051 Sum_probs=224.4
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 57 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~v~~~~g~t~al~~~~~~l~~-------- 123 (389)
T 1o4s_A 57 EPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD-------- 123 (389)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEEecCHHHHHHHHHHHhCC--------
Confidence 445555665554433456555678899999999999988874111 1469999999999988877632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++..+++..|. +++.+|.+++++|.+|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 191 (389)
T 1o4s_A 124 ---PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVY 191 (389)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCC
Confidence 456788899999999999999999 999999875334789999999988643 34677889999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
| +++|+++|+++|+++++|++|+.+....+ .... +.+....|.++.++||+++.| ..+|+++++++ +.+.+
T Consensus 192 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~--~~~~l 268 (389)
T 1o4s_A 192 RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK--VATAV 268 (389)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH--HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH--HHHHH
Confidence 6 99999999999999999999987653211 1111 222235799999999999744 34899888643 22222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
.....+.. .....+..+++...+.. ++++..++..++++++.+.|++. ++++..+...
T Consensus 269 ~~~~~~~~--------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 326 (389)
T 1o4s_A 269 SKIQSHTT--------------------SCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGA 326 (389)
T ss_dssp HHHHHHHT--------------------CSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBS
T ss_pred HHHhhhcc--------------------cCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcc
Confidence 11100000 00123445555555543 37778888889999999999987 7776543333
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+++.+. .. ..++.++|. +.|+.+..+..+....++|++++ +++++|+++++.|.++.+
T Consensus 327 ~~~~~~~~-~~----------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~---~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 327 FYLFFKVR-GD----------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp SEEEEECS-SC----------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCC-CC----------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe---CCHHHHHHHHHHHHHHHh
Confidence 33444553 21 355677776 67865444433332348999996 388999999999987653
No 57
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=4.9e-24 Score=217.27 Aligned_cols=311 Identities=17% Similarity=0.156 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHH-
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCK- 206 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~- 206 (499)
....++.+++++++|.+.+ ..++|+|||+++..++.+++..... +.++ .+|+++...|.++..++.
T Consensus 71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~-----~~~gd~vii~~~~~~~~~~~~~~~ 138 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQAT-----RSPERRVIVTETSNFPTDLYIAEG 138 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHH-----HSTTCCEEEEETTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhcccccc-----cCCCCcEEEEcCCCCCchHHHHHH
Confidence 4556677889999998643 3588999999887787776521100 0033 357777889998766543
Q ss_pred ---Hh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 207 ---LA--GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 207 ---~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.. |+ +++.||+ +++|+++|++ .+.+|++++++|++|.+.|+++|+++|++||+|+|+
T Consensus 139 ~~~~~~~g~---~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 139 LADMLQQGY---TLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIW 200 (416)
T ss_dssp HHHHHCSSC---EEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCCc---eEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEE
Confidence 34 88 8888875 5678887753 245899999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcc-eEEEEeCchhHHHhhcC-CccCCCCCC-CCCCCcccCC
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC-CCLWVKQPGLLVKALST-DPEYLKNKP-SESNSVVDFK 358 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-g~l~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~~ 358 (499)
|++|+.+....+ ... . .+|++++++||+++.+.++ |+++++++. . +.+.. ...|..... .+......+.
T Consensus 201 D~a~~~g~~~~~-~~~----~-~~d~~~~s~~K~l~~g~~~~g~l~~~~~~-~-~~l~~~~~g~~g~~~~~~~~~~~~~~ 272 (416)
T 1qz9_A 201 DLAHSAGAVPVD-LHQ----A-GADYAIGCTYKYLNGGPGSQAFVWVSPQL-C-DLVPQPLSGWFGHSRQFAMEPRYEPS 272 (416)
T ss_dssp ECTTTTTTSCCC-HHH----H-TCSEEEECSSSTTCCCTTCCCEEEECTTT-T-TTSCCSCCCGGGBCTTSCCCSSCCBC
T ss_pred EccccccCcCCC-hhh----c-CCCEEEecCcccCCCCCCCeEEEEECHHH-H-hccCCCccccCccccccCCCCccCCC
Confidence 999975433221 111 1 3899999999998777787 999987652 1 11111 111110000 0000000000
Q ss_pred --CcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcCC----CceEEEEEecCC
Q 010842 359 --DWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVPR----HFALVCFRLNPY 427 (499)
Q Consensus 359 --~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~----~~~~v~f~~~~~ 427 (499)
......+.. . ....+..+++.+..++++++.++..++++++.+.|++. | +++++.+. ..++++|++..
T Consensus 273 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 351 (416)
T 1qz9_A 273 NGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE- 351 (416)
T ss_dssp SSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-
T ss_pred cchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC-
Confidence 001111111 1 12344556666655688899999999999999999885 6 88887553 35677776632
Q ss_pred CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 428 PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 428 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..++.+.|.++|+. +. ..+..++|+++.++.+|++|+++++++|+++.++.
T Consensus 352 -----------~~~l~~~l~~~gi~-~~---~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 352 -----------GYAVIQALIDRGVI-GD---YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp -----------HHHHHHHHHTTTEE-CE---EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -----------HHHHHHHHHhCCcE-ec---cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 35677888888843 22 22446799999534789999999999999988764
No 58
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=2.7e-24 Score=219.87 Aligned_cols=332 Identities=13% Similarity=0.083 Sum_probs=224.2
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|... ..++++++.+|+++.+|++... ...++|+||++|+..++.++..
T Consensus 78 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~--------- 141 (421)
T 3l8a_A 78 EIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE--------- 141 (421)
T ss_dssp HHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC---------
Confidence 34455555554333344433 3789999999999999954221 1469999999999999887642
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV- 262 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 262 (499)
++..|+++..+|.++..++...|. +++.+|++ .+++|.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 142 --~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~ 211 (421)
T 3l8a_A 142 --KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVW 211 (421)
T ss_dssp --TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcC
Confidence 456788899999999999999999 99999987 4556889999999999741 23478889999999999
Q ss_pred --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842 263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~ 336 (499)
+++++|+++|++||+++++|++|+++........... ......+.++.+++|+++ ....+|++++++++.. +.
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~-~~ 290 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR-RK 290 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH-HH
Confidence 7899999999999999999999987643221111111 111234577889999997 4467899988865433 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
+....... +......+....+..++.. +.+.+++..++..++++++.+.|++.|+++++.+..
T Consensus 291 ~~~~~~~~----------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~ 353 (421)
T 3l8a_A 291 FQYRQLAN----------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEG 353 (421)
T ss_dssp HHHHHHHT----------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSB
T ss_pred HHHHHHhc----------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCe
Confidence 21110000 0001111112222333332 566788888999999999999998888998875444
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
...+++.+.... ....++.+.|.++ |..+..+..+ .+..++|++++ +++++|++++++|+++.+
T Consensus 354 ~~~~~v~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 354 TYLVWLDFSAYA--------IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp SSEEEEECGGGT--------CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHC-
T ss_pred eEEEEEeccccC--------CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence 333435554311 0024567777644 7544333333 23478999985 689999999999988753
No 59
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.93 E-value=1.2e-24 Score=221.21 Aligned_cols=318 Identities=12% Similarity=0.065 Sum_probs=218.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|...++..++.+++.+++++.+|.+.+. ....++|+|||+|+..++.+... ++..|+++..+|.
T Consensus 73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~ 137 (407)
T 3nra_A 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF 137 (407)
T ss_dssp HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence 45556677899999999999999984210 01368999999999888776532 4667888999999
Q ss_pred hHHHHHHHhCCCCCCeEEeeCCC----CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842 200 TFAKVCKLAGVSPANIRALPTSV----DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA 272 (499)
Q Consensus 200 s~~ka~~~~G~g~~~v~~v~~~~----~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia 272 (499)
++..+++..|. +++.+|++. +.++.+|+++|+++++++ +.+|+++.++|++|.+-| +++|+++|
T Consensus 138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 208 (407)
T 3nra_A 138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALA 208 (407)
T ss_dssp HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence 99999999999 999999842 134789999999999763 336788999999999988 99999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhc---CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLN---GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~---g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
++||+++++|++|+++.+.......... .....+.++.+++|+++.| ..+|+++.+. ... +.+.....+...
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~~~-- 284 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR-AII-ARMEKLQAIVSL-- 284 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-HHH-HHHHHHHHHHTS--
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-HHH-HHHHHHHhhhcc--
Confidence 9999999999999876532211111110 1123557888999999844 5678887643 222 222111000000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 426 (499)
....+..+++...+ +.+.+++..++..++++++.+.|+++|++++..+.....+.+.+..
T Consensus 285 ------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 285 ------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPK 346 (407)
T ss_dssp ------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCC
T ss_pred ------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCC
Confidence 00122333333333 2356788888899999999999999989887644443445444433
Q ss_pred CCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 427 YPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.. ....++.+.|.+ .|+.+..+..+. +..++|++++ +++++|++++++|.++.+++.
T Consensus 347 ~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 347 LA--------VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS---QDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp BS--------SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHHB
T ss_pred CC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence 11 013456677754 475444333332 4578999996 389999999999999887653
No 60
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.93 E-value=1.7e-24 Score=217.40 Aligned_cols=332 Identities=11% Similarity=0.054 Sum_probs=212.7
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+... .+..++...++++ .+++++|.+ . .++|+|||+|+..++.+++.. ..
T Consensus 14 ~v~~a~~~~~~~~--~~~~~~~~~~l~~----~la~~~~~~-~--------v~~~~ggt~al~~~~~~~~~~-~~----- 72 (375)
T 2fnu_A 14 EDKKAVLEVLNSK--QLTQGKRSLLFEE----ALCEFLGVK-H--------ALVFNSATSALLTLYRNFSEF-SA----- 72 (375)
T ss_dssp HHHHHHHHHHTSS--CCSSSHHHHHHHH----HHHHHHTCS-E--------EEEESCHHHHHHHHHHHSSCC-CT-----
T ss_pred HHHHHHHHHHHcC--cccCChHHHHHHH----HHHHHhCCC-e--------EEEeCCHHHHHHHHHHHhccc-CC-----
Confidence 3445555555432 1223454444554 488888876 2 499999999999888876310 00
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++..+|.++..++...|+ +++.+|+++++ .+|+++|+++++++ +.+|+.+++ +|.+.|
T Consensus 73 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~--~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~ 136 (375)
T 2fnu_A 73 --DRNEIITTPISFVATANMLLESGY---TPVFAGIKNDG--NIDELALEKLINER------TKAIVSVDY---AGKSVE 136 (375)
T ss_dssp --TSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTTS--SBCGGGSGGGCCTT------EEEEEEECG---GGCCCC
T ss_pred --CCCEEEECCCccHhHHHHHHHCCC---EEEEeccCCCC--CCCHHHHHhhcCcC------ceEEEEeCC---cCCccC
Confidence 456899999999999999999999 99999998654 89999999988643 235566554 899999
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC-chhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ-PGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~-~~~l~~~~~~~~~y 343 (499)
+++|.++|++||+++|+|++|+.+...... .+.....+++.++++||+++ | |+|++++++ ++.. +.+.. +
T Consensus 137 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~-~~~~~---~ 207 (375)
T 2fnu_A 137 VESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELH-EKMKL---F 207 (375)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHH-HHHHH---H
T ss_pred HHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHH-HHHHH---H
Confidence 999999999999999999999865432111 11122236677888899995 5 788888853 4332 21111 0
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----Cce
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFA 418 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~ 418 (499)
......+. ....+. ....+.++....+.+++.....++++++.++..++++++.+.|+++|++++..++ ...
T Consensus 208 ~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 284 (375)
T 2fnu_A 208 RSHGMLKK-DFFEGE--VKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNH 284 (375)
T ss_dssp TBTTEEES-SSSCEE--ESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCS
T ss_pred HhcCCccc-cccccc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceE
Confidence 00000000 000000 0011212222233333333345778889999999999999999999999886541 223
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-e------EC--------------CEEEEEEeccCCCCcHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-I------VG--------------GLYMLRFAVGASLTDER 477 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~------~~--------------g~~~lRi~~~~~~~t~~ 477 (499)
.+.+.+.... .. ...++.+.|.++|+.+.... . +. +..++|+++. +.+|++
T Consensus 285 ~~~~~~~~~~------~~-~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~~~t~~ 356 (375)
T 2fnu_A 285 LYPILMHQKF------FT-CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCH-ANLNLE 356 (375)
T ss_dssp CEEEEECGGG------GG-GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCC-TTCCHH
T ss_pred EEEEEeCccc------cc-hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCC-CCCCHH
Confidence 3455554310 00 14567777877785432110 0 00 1257999984 889999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 478 HVVAAWELIMEGADRL 493 (499)
Q Consensus 478 di~~l~~~l~~~~~~l 493 (499)
|+++++++|+++.+++
T Consensus 357 ~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 357 SVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988765
No 61
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=1.2e-23 Score=211.96 Aligned_cols=326 Identities=10% Similarity=0.056 Sum_probs=220.1
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
..+.+.+...+......|... ..++++++.+++++.+|. +.+ ..++|+|||+|+..++.+..+
T Consensus 40 ~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~-------~v~~~~g~~~a~~~~~~~l~~------ 104 (383)
T 3kax_A 40 QPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKE-------WIVFSAGIVPALSTSIQAFTK------ 104 (383)
T ss_dssp HHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGG-------GEEEESCHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChh-------hEEEcCCHHHHHHHHHHHhCC------
Confidence 344555555554433344333 578999999999999994 333 469999999999888877632
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++..+|.++...++..|. +++.+|++.+ ++|.+|+++|+++++++ +.+|+++.++|++|
T Consensus 105 -----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG 170 (383)
T 3kax_A 105 -----ENESVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIG 170 (383)
T ss_dssp -----TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTT
T ss_pred -----CCCEEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCC
Confidence 466788999999999999999999 9999998743 34779999999999433 33677889999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC---CCCceeEeccccccc-CCCcceEEEEeCchhH
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI---ERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLL 333 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~---~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l 333 (499)
.+-| +++|+++|++||+++++|++|+.+............-. ...+.++.+.||+++ ....+|+++.+++...
T Consensus 171 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 250 (383)
T 3kax_A 171 RVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLR 250 (383)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHH
Confidence 9966 56667779999999999999987543221111111110 134577889999998 4456888887655433
Q ss_pred HHhhcCC-ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCe
Q 010842 334 VKALSTD-PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRF 409 (499)
Q Consensus 334 ~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~ 409 (499)
+.+... ..+.. .....+..+++...+ +.+.++++.++..++++++.+.|++ +|++
T Consensus 251 -~~~~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 309 (383)
T 3kax_A 251 -QAFTSIQYRQGF--------------------HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTL 309 (383)
T ss_dssp -HHHHHHHHHTTC--------------------CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred -HHHHHHHhhccc--------------------CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 222110 00000 011234444444444 3456788888899999999999988 7899
Q ss_pred EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
+++.+.....+++.+...+ ....++.++|. +.|+.+..+..+. +..++|++++ +++++|++++++|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l 378 (383)
T 3kax_A 310 SVMKPEGSFLLWIDCSALN--------LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG---CPRSVLEEILNRL 378 (383)
T ss_dssp EECCCSBSSEEEEECGGGC--------CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS---SCHHHHHHHHHHH
T ss_pred eEecCCceEEEEEEccccC--------CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc---CCHHHHHHHHHHH
Confidence 8874433333335554311 01456778887 5675444333332 3478999986 5889999999999
Q ss_pred HHHH
Q 010842 487 MEGA 490 (499)
Q Consensus 487 ~~~~ 490 (499)
.++.
T Consensus 379 ~~~l 382 (383)
T 3kax_A 379 RHTF 382 (383)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 62
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.92 E-value=4.1e-24 Score=218.24 Aligned_cols=323 Identities=14% Similarity=0.091 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
+...+..++.+++++++|.+.. +++++||+|+..++.+.+-. ++..|+++..+|.++..++
T Consensus 39 g~~~l~~~l~~~la~~~g~~~~---------i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~ 99 (418)
T 2c81_A 39 GEESMERKFAKAFADFNGVPYC---------VPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAV 99 (418)
T ss_dssp SSCCHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHH
Confidence 3344556666779999998743 88899999999888876211 4567899999999999999
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+..|+ +++.+|++++ ++.+|+++|+++++++ +.+|++ ++++|.+.|+++|.++|+++|+++|+|++|
T Consensus 100 ~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~ 166 (418)
T 2c81_A 100 LNVNA---LPVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQ 166 (418)
T ss_dssp HHTTC---EEEEECBCTT-TCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCC---EEEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcc
Confidence 99999 9999998753 4799999999988643 234544 357999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC-CCCCcccCCC-----
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNSVVDFKD----- 359 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~----- 359 (499)
+.+...... . ...+..+++.++++||+++.+ .+|+++.+++.......... .+...... .......+.+
T Consensus 167 ~~~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (418)
T 2c81_A 167 SHGSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLR-ADSRVYCDDSSELMHGDMQLVKKG 241 (418)
T ss_dssp CTTCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHH-BTTEEECSCGGGCCTTCBSEEECC
T ss_pred cccCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHH-HhCccccccccccccchhhccccc
Confidence 877532111 1 111223667777789999874 67777775554322111100 00000000 0000000110
Q ss_pred cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc------eEEEEEecCCCCCCcc
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF------ALVCFRLNPYPHSGSA 433 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~------~~v~f~~~~~~~~~~~ 433 (499)
..+..+.+...+..+..+. ..++++++.++..++++++.+.|+++|++++..++.. .++++.+.+.. ..
T Consensus 242 ~~~g~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 316 (418)
T 2c81_A 242 DIQGSNYCLSEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVK-FG-- 316 (418)
T ss_dssp SSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGG-TT--
T ss_pred cccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccc-cc--
Confidence 0011222233443333332 3366788889999999999999999999998744332 35556664200 00
Q ss_pred hhHHHHHHHHHHHHhc-CCE---EEEee-eE------C--------------------C---------EEEEEEeccCCC
Q 010842 434 DTEMLNRKLLDWVNST-GRV---YLTHT-IV------G--------------------G---------LYMLRFAVGASL 473 (499)
Q Consensus 434 ~~~~~~~~l~~~l~~~-g~~---~~~~~-~~------~--------------------g---------~~~lRi~~~~~~ 473 (499)
.....++.+.|.++ |+. +..+. .. . + ...+|+++ ++.
T Consensus 317 --~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~ 393 (418)
T 2c81_A 317 --GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHH-AIL 393 (418)
T ss_dssp --TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEG-GGG
T ss_pred --ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecC-Ccc
Confidence 00135677777777 865 32211 00 0 1 25799999 588
Q ss_pred C-cHHHHHHHHHHHHHHHHHH
Q 010842 474 T-DERHVVAAWELIMEGADRL 493 (499)
Q Consensus 474 ~-t~~di~~l~~~l~~~~~~l 493 (499)
+ |++||++++++|+++.+++
T Consensus 394 ~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 394 LAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp GSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 9 9999999999999987654
No 63
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=5.6e-24 Score=217.91 Aligned_cols=340 Identities=10% Similarity=0.027 Sum_probs=225.2
Q ss_pred hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
++..+.+.+...+... ...|...++..++++++.+++.+. | .+.+ ..++|+|||+|+..++.+..+
T Consensus 72 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~-------~v~~t~g~t~al~~~~~~l~~--- 140 (427)
T 3dyd_A 72 TDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAK-------DVILTSGCSQAIDLCLAVLAN--- 140 (427)
T ss_dssp CCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGG-------GEEEESSHHHHHHHHHHHHCC---
T ss_pred CCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChH-------HEEEecCcHHHHHHHHHHhcC---
Confidence 3344555555544332 235655667778888854444332 2 2222 469999999999988887642
Q ss_pred hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
++..|+++.++|..+...++..|+ +++.+|.++++++.+|+++|+++++++ +.+|+++.++|+
T Consensus 141 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~np 203 (427)
T 3dyd_A 141 --------PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNP 203 (427)
T ss_dssp --------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTT
T ss_pred --------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCC
Confidence 466788899999999999999999 999999876556899999999988653 347888899999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCc---
Q 010842 259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQP--- 330 (499)
Q Consensus 259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~--- 330 (499)
||.+-| +++|+++|+++|+++++|++|+++............--...+ .++.+.+|.++.| ..+|+++++++
T Consensus 204 tG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~ 283 (427)
T 3dyd_A 204 CGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDI 283 (427)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchh
Confidence 999999 999999999999999999999876542211111111001123 4456999986544 55899998864
Q ss_pred --hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842 331 --GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR 408 (499)
Q Consensus 331 --~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 408 (499)
..+...+......... ........+..++.....+.++++.++..++++++.+.|+++|+
T Consensus 284 ~~~~i~~~l~~~~~~~~~------------------~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 345 (427)
T 3dyd_A 284 FGNEIRDGLVKLSQRILG------------------PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPG 345 (427)
T ss_dssp SHHHHHHHHHHHHHHHCC------------------SCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHhccCC------------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1122221110000000 00011222333344334677889999999999999999999999
Q ss_pred eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
++++.+.....+.+.+........ ....++.++|. +.|+.+..+..+....++|++++ +++++|++++++|.
T Consensus 346 ~~~~~p~~g~~~~~~l~~~~~~~~----~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 346 LRPVRPSGAMYLMVGIEMEHFPEF----ENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACSRIQ 418 (427)
T ss_dssp EEEECCSBTTEEEEEECGGGCTTC----SSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHHHHH
T ss_pred ceecCCCeeEEEEEecCHhhcCCC----CCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHHHHH
Confidence 987755555555556542100000 01345666664 56765555545555678999985 68999999999999
Q ss_pred HHHHHHh
Q 010842 488 EGADRLF 494 (499)
Q Consensus 488 ~~~~~l~ 494 (499)
++.+++.
T Consensus 419 ~~l~~~~ 425 (427)
T 3dyd_A 419 EFCEQHY 425 (427)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9987764
No 64
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=1.4e-23 Score=212.20 Aligned_cols=332 Identities=11% Similarity=0.001 Sum_probs=221.9
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHH-HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTE-LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~-lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...++.....|... ..+ +++++.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 43 ~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~------ 109 (390)
T 1d2f_A 43 APCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE------ 109 (390)
T ss_dssp CHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC------
T ss_pred CHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC------
Confidence 3445566666665433445433 567 9999999999988853221 1469999999999888876532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++..+|.++..+++..|. +++.+|++.+ ++|.+|+++|++++++. .+.+|+++.++|++|
T Consensus 110 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG 176 (390)
T 1d2f_A 110 -----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTG 176 (390)
T ss_dssp -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTC
T ss_pred -----CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCC
Confidence 456788899999999999999999 9999998754 25779999999998641 245677789999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CC-ceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RV-DSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
.+-| +++|+++|++||+++++|++|+.+.......... ..+. .. |. ..+.+|+++.| ..+|+++++++....
T Consensus 177 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~ 254 (390)
T 1d2f_A 177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW-SNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRD 254 (390)
T ss_dssp CCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCG-GGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCH-HHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHH
Confidence 9966 8999999999999999999998764321111111 1121 12 56 88999999744 457999887654332
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEI 411 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~ 411 (499)
.+.....+ .. + .+ ....+..+++...+ +.+.+++..++..++++++.+.|++ +|++++
T Consensus 255 -~~~~~~~~--~~-------------~--~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 315 (390)
T 1d2f_A 255 -AYLSALKG--RD-------------G--LS-SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNW 315 (390)
T ss_dssp -HHHHHHHT--TS-------------C--CC-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred -HHHHHHhh--hc-------------c--cC-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 22110000 00 0 00 01233334333333 3566788888889999999999998 788876
Q ss_pred EcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842 412 VVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM 487 (499)
Q Consensus 412 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~ 487 (499)
. ++..+.+ ++.+...+ ....++.+.|. +.|+.+..+..+. +..++|++++. ++++|+++++.|.
T Consensus 316 ~-~~~~~~~~~~~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~ 383 (390)
T 1d2f_A 316 Q-IPQSTYLAWLDLRPLN--------IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVAGLI 383 (390)
T ss_dssp C-CCSBCSEEEEECGGGC--------CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHH
T ss_pred e-cCCccEEEEEEccccC--------CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence 5 3444444 45654310 01356778887 5675544433332 34679999963 5789999999999
Q ss_pred HHHHHH
Q 010842 488 EGADRL 493 (499)
Q Consensus 488 ~~~~~l 493 (499)
++.+++
T Consensus 384 ~~l~~~ 389 (390)
T 1d2f_A 384 NAIRAV 389 (390)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 887654
No 65
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=3.1e-23 Score=210.36 Aligned_cols=303 Identities=13% Similarity=0.073 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+.+++++|.+.. +++++||+|+..++.+... ++..|+++...|.++..+++..
T Consensus 90 ~~~~~l~~~la~~~g~~~~---------i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 149 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGMEDA---------ILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC 149 (401)
T ss_dssp HHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCcE---------EEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence 3445555668888898732 7778889999887776532 4567888999999999999988
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc-c
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA-G 287 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g-~ 287 (499)
|. .++.+|. +|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+ +
T Consensus 150 g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g 219 (401)
T 1fc4_A 150 KA---KRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG 219 (401)
T ss_dssp CS---EEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred CC---ceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence 98 8888762 48999999998754433346688889999999999999999999999999999999996 4
Q ss_pred hhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 288 SACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
+............++ ...|+++.++||+++.+.+ |+++.++ +...........|... .
T Consensus 220 ~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~~-~~~~~l~~~~~~~~~~-------------------~ 278 (401)
T 1fc4_A 220 FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARK-EVVEWLRQRSRPYLFS-------------------N 278 (401)
T ss_dssp TSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECH-HHHHHHHHHCHHHHHS-------------------C
T ss_pred ccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcCH-HHHHHHHHhCcCceeC-------------------C
Confidence 421111110111222 2479999999999965655 8888753 3332211111111100 0
Q ss_pred CCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW 445 (499)
Q Consensus 367 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~ 445 (499)
....+.+++++..+.. +..++..++..++++++.+.|++. ++++. ++..+++++.+.. .....++.+.
T Consensus 279 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~l~~~ 347 (401)
T 1fc4_A 279 SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD---------AVVAQKFARE 347 (401)
T ss_dssp CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC---------HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC---------hHHHHHHHHH
Confidence 1123333443333321 114677888889999999999987 77766 5566777777743 1235677888
Q ss_pred HHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 446 VNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 446 l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
|.++|+.+.....+ .+..++|+++. ..++++|+++++++|+++.+++.
T Consensus 348 l~~~gi~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 348 LQKEGIYVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHTTEECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCcEEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 88888543322211 23578999995 77899999999999999987763
No 66
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=215.24 Aligned_cols=310 Identities=10% Similarity=0.007 Sum_probs=208.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
.++.+.++-+++++.+++++|.++.. ..+| |+|||+|+-+++...... .++..+++....|++.
T Consensus 52 r~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a~~~l~~~---------~~Gd~v~~~~~g~~~~ 116 (377)
T 3e77_A 52 RSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAVPLNLIGL---------KAGRCADYVVTGAWSA 116 (377)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHHHGGG---------STTCEEEECCCSHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHHHHhccCC---------CCCCeEEEEECCHHHH
Confidence 35667788888999999999997531 3577 689999988777654321 0234555555677663
Q ss_pred --HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 202 --AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 202 --~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.+.++..|. .++.+|++.+ +..++++++.+++++++ +|.+++.+|.+|.+.|+ +|+++|+++
T Consensus 117 ~~~~~a~~~G~---~~~~~~~~~~--~~~~~~~~~~~i~~~t~------lV~~~h~et~tG~~~pi-----i~~~~~~~~ 180 (377)
T 3e77_A 117 KAAEEAKKFGT---INIVHPKLGS--YTKIPDPSTWNLNPDAS------YVYYCANETVHGVEFDF-----IPDVKGAVL 180 (377)
T ss_dssp HHHHHHTTTSE---EEECSCCCSS--SCSCCCGGGCCCCTTCS------CEEEESEETTTTEECSS-----CCCCTTCCE
T ss_pred HHHHHHHHhCC---ceEEeccCCC--cCCCCChHHhccCCCcc------EEEEeCccCchheEchh-----hhccCCCEE
Confidence 334445566 7777887643 36777777666655443 78899999999999999 478899999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|||++++.+....+- ...|.+++++|||++ |.|.|++++|++.. .+.-...+.|+. +..
T Consensus 181 ~vD~~q~~g~~~id~--------~~~~~~~~s~~K~~g-p~G~g~l~~~~~~l-~~~~~~~p~~~~-----------~~~ 239 (377)
T 3e77_A 181 VCDMSSNFLSKPVDV--------SKFGVIFAGAQKNVG-SAGVTVVIVRDDLL-GFALRECPSVLE-----------YKV 239 (377)
T ss_dssp EEECTTTTTSSCCCG--------GGCSEEEEEGGGTTS-CTTCEEEEEETTSC-SCCCTTSCGGGC-----------HHH
T ss_pred EEEcccccCCCCCch--------hhcCEEEEecccccC-CCccEEEEEcHHHH-hhccCCCCchhh-----------HHH
Confidence 999999877654432 124568999999995 99999999997532 111011122221 000
Q ss_pred cccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC--Cc-eEEEEEecCCCC
Q 010842 360 WQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR--HF-ALVCFRLNPYPH 429 (499)
Q Consensus 360 ~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~ 429 (499)
+.-...+.+ ....+-.+++.+-.. |++++.++..++++++++.|+++|++++.. ++ .. .+++|.+.....
T Consensus 240 ~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~ 319 (377)
T 3e77_A 240 QAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG 319 (377)
T ss_dssp HHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTC
T ss_pred HhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCC
Confidence 000011111 123555667777667 899999999999999999999999998643 22 33 368999875320
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+ .++...+.+.+.+.|++...+ ......+|+|+. ..+|++|||+++++|+++.++
T Consensus 320 --~---~~~~~~~l~~l~~~Gi~~~~g--~~~~g~iRiS~~-~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 320 --D---DALEKRFLDKALELNMLSLKG--HRSVGGIRASLY-NAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp --C---HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred --c---hhHHHHHHHHHHHCCcEEeCC--CCcCCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 0 123345677777788543222 122345999995 789999999999999998765
No 67
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.92 E-value=2e-23 Score=212.14 Aligned_cols=337 Identities=14% Similarity=0.109 Sum_probs=223.1
Q ss_pred hHHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
++..+.+.+...+... .. |...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.++.+
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~--- 120 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID--- 120 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC---
Confidence 3445555555544322 23 5555567899999999998888853211 1468999999999988887742
Q ss_pred hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCC
Q 010842 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTT 257 (499)
Q Consensus 179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt 257 (499)
++..|+++..+|.++..+++..|. +++.+|++++ .+|+++|++++++....+..+.+| +...++|
T Consensus 121 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~n 186 (407)
T 2zc0_A 121 --------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186 (407)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCC
Confidence 456788899999999999999999 9999998753 399999999997433232234455 5678899
Q ss_pred cccccCChh---HHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchh
Q 010842 258 STTAVDNVE---PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGL 332 (499)
Q Consensus 258 ~~G~id~l~---~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~ 332 (499)
++|.+.|++ +|+++|++||+++|+|++|+++.+....... +..+ ...+.++.+.+|+++....+|++++++ +.
T Consensus 187 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~-~~ 264 (407)
T 2zc0_A 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG-EI 264 (407)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH-HH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecCH-HH
Confidence 999998886 9999999999999999999886432111111 1111 123456778899999334589988863 32
Q ss_pred HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--c--H-HHHHHHHHHHHHHHHHHHHHHhc-C
Q 010842 333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--G--V-LNLQSHIRSDIRLAKMFEGFVKS-D 406 (499)
Q Consensus 333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~-~g~~~~~~~~~~~a~~l~~~L~~-~ 406 (499)
. +.+....... +.....+..+++...+ + . +.+++..++..++++++.+.|++ .
T Consensus 265 ~-~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 323 (407)
T 2zc0_A 265 L-KKVLMQKQPI--------------------DFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHL 323 (407)
T ss_dssp H-HHHHHHHTTT--------------------TSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHhh--------------------cCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2221110000 0011223333333333 2 2 34566777788889999999987 5
Q ss_pred CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHH
Q 010842 407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG----GLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~ 481 (499)
|++++..+.....+++++.... ...++.+.|.++ |+.+..+..+. +..++|+++. .. |+++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~-~~-~~~~i~~ 392 (407)
T 2zc0_A 324 PNAEFTKPIAGMFVMFFLPEGA---------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS-RP-SKEEIPI 392 (407)
T ss_dssp TTSCBCCCSBSSEEEEECSTTC---------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECS-SS-CTTHHHH
T ss_pred CCCEEecCCCcEEEEEEcCCCC---------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeC-CC-CHHHHHH
Confidence 7777654444456667764311 135677888877 75443332221 3468999996 33 7999999
Q ss_pred HHHHHHHHHHHHhc
Q 010842 482 AWELIMEGADRLFK 495 (499)
Q Consensus 482 l~~~l~~~~~~l~~ 495 (499)
++++|.++.+++.+
T Consensus 393 ~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 393 GIKKLAKLYKEKFG 406 (407)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887754
No 68
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=2.1e-23 Score=214.07 Aligned_cols=324 Identities=12% Similarity=0.051 Sum_probs=221.9
Q ss_pred cccChhhHHHHHHHHHHHHHHcCC----CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842 121 WLASPASTELEIVVMDWLATMLKL----PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ 196 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~----~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~ 196 (499)
|....+..++++++.+|+.+..|. +.+ ..++|+|||+||..++.+.++ ++..|+++..
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-------~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~p 143 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-------HLVLTAGATSANETFIFCLAD-----------PGEAVLIPTP 143 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-------GEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEES
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-------HEEEcCChHHHHHHHHHHhcC-----------CCCeEEECCC
Confidence 444556689999998988877663 232 469999999999988887643 4567888999
Q ss_pred CchhHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842 197 THSTFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA 272 (499)
Q Consensus 197 ~H~s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia 272 (499)
.|.++..++. ..|. +++.+|.+++++|.+|+++|+++|++..+.+..+.+|+++.++|++|.+-+ +++|+++|
T Consensus 144 ~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~ 220 (435)
T 3piu_A 144 YYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV 220 (435)
T ss_dssp CCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999998887 7888 999999987666889999999999886666666778899999999999944 68888999
Q ss_pred HHhCCEEEeeccccchhccCccchh---hhcCC--------CCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRH---YLNGI--------ERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~---~~~g~--------~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
++||+++++|++|+++.+....... ..... .....++.+.||+++. ...+|+++.+++... +.+...
T Consensus 221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~ 299 (435)
T 3piu_A 221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKM 299 (435)
T ss_dssp HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHH
T ss_pred HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHH
Confidence 9999999999999875443221111 11110 1123678899999974 456899888665432 222211
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
..+.. ...+...+....+. .+.+++..++..++++++.+.|++. ++++..+.
T Consensus 300 ~~~~~----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 356 (435)
T 3piu_A 300 SSFGL----------------------VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGN 356 (435)
T ss_dssp GGGSC----------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCC
T ss_pred hhcCC----------------------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence 11110 01222222222221 2345667778888899999999987 88876544
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...++.+.+.... ... ......++.++|.++ |..+..+..+ .+..++|+++. .. ++++|++++++|.++.++
T Consensus 357 ~g~~~~~~l~~~~--~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~-~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 357 AGLFCWVDMRHLL--RSN-TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA-NL-PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp SSSEEEEECGGGS--SSS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECS-SS-CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEccccc--ccC-CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEee-CC-CHHHHHHHHHHHHHHHHH
Confidence 4356666664321 000 111245677788777 7544433332 34578999985 33 899999999999999877
Q ss_pred Hh
Q 010842 493 LF 494 (499)
Q Consensus 493 l~ 494 (499)
+.
T Consensus 432 ~~ 433 (435)
T 3piu_A 432 YY 433 (435)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 69
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.3e-23 Score=215.75 Aligned_cols=343 Identities=10% Similarity=0.008 Sum_probs=224.1
Q ss_pred HHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH--HHHHhHh
Q 010842 105 FLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR--DRALDAV 181 (499)
Q Consensus 105 ~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar--~~~~~~~ 181 (499)
.+.+.+...+.... ..|....+..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+.. .
T Consensus 61 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~i~~t~g~t~al~~~~~~l~~~~------ 129 (437)
T 3g0t_A 61 IGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-----RACVPTVGSMQGCFVSFLVANRTH------ 129 (437)
T ss_dssp HHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHTTSC------
T ss_pred HHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc-----ccEEEeCCHHHHHHHHHHHHhcCC------
Confidence 34444444444233 455555556899999999999888875321 256999999999988887764 2
Q ss_pred hhhccCCe--EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 182 GAENMHKL--VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 182 ~~~g~~~~--~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++. .|+++..+|.++..+++..|. +++.+|++++ ++.+|+++|+++++.. .+.+|+++.++|+|
T Consensus 130 -----~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~-----~~~~v~l~~p~npt 195 (437)
T 3g0t_A 130 -----KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFEY-RGEKLREKLESYLQTG-----QFCSIIYSNPNNPT 195 (437)
T ss_dssp -----TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGGG-CTTHHHHHHHHHHTTT-----CCCEEEEESSCTTT
T ss_pred -----CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecCC-CCccCHHHHHHHHhcC-----CceEEEEeCCCCCC
Confidence 455 688889999999999999999 9999999744 4789999999998321 23467788999999
Q ss_pred cccCC---hhHHHHHHHHhCCEEEeeccccchhccCccch-------hhhcCCCCCceeEeccccccc-CCCcceEEEEe
Q 010842 260 TAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFR-------HYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVK 328 (499)
Q Consensus 260 G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~-------~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r 328 (499)
|.+-| +++|+++|++||+++|+|++|+.+.+...... ..+.+....+.++.+.||+++ ....+|+++.+
T Consensus 196 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 275 (437)
T 3g0t_A 196 WQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS 275 (437)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC
T ss_pred CCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC
Confidence 99976 77789999999999999999986543210000 111222346688899999997 44568888876
Q ss_pred CchhHHH-hhc-CCccCCCCCCCCCCCccc-CCCcccCCCCCCCcHHHHHHHHHhcHH--H---HHHHHHHHHHHHHHHH
Q 010842 329 QPGLLVK-ALS-TDPEYLKNKPSESNSVVD-FKDWQVGTGRRFKSLRLWMVLRSYGVL--N---LQSHIRSDIRLAKMFE 400 (499)
Q Consensus 329 ~~~~l~~-~~~-~~~~yl~~~~~~~~~~~~-~~~~~~~~sr~~~al~~~~~l~~~g~~--g---~~~~~~~~~~~a~~l~ 400 (499)
++ .. + .+. ....+..... ... +.......+.....+..+++...+... + ++++.++..++++++.
T Consensus 276 ~~-~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (437)
T 3g0t_A 276 GK-LY-EREYPDLEESFGRLRF-----GEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMK 348 (437)
T ss_dssp HH-HH-HCBCGGGHHHHSCSBH-----HHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHH
T ss_pred HH-Hh-hhhhhcccccccccch-----hHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHH
Confidence 42 22 2 100 0000000000 000 000000000011234444444444322 2 7888899999999999
Q ss_pred HHHhcCCCeEEE------cC-CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECC--EEEEEEeccC
Q 010842 401 GFVKSDPRFEIV------VP-RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGG--LYMLRFAVGA 471 (499)
Q Consensus 401 ~~L~~~~~~~~~------~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g--~~~lRi~~~~ 471 (499)
+.|+++ ++++. .+ .....+++.+.+.. ..++.++|.++|+.+.....+.. ..++|++++
T Consensus 349 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~- 416 (437)
T 3g0t_A 349 KMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD----------SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS- 416 (437)
T ss_dssp HHHHTT-TEEESSCEETTEECCSSSEEEEEETTCC----------HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-
T ss_pred HHHHHc-CCEEeccccCCCCCceeEEEEEecCCCC----------HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-
Confidence 999998 88887 24 45556666665322 45677888888855443322221 156999995
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~ 492 (499)
. .+++||++++++|+++.++
T Consensus 417 ~-~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 417 L-LPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp S-SCGGGHHHHHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHhc
Confidence 3 4899999999999987653
No 70
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=1.7e-23 Score=214.56 Aligned_cols=358 Identities=13% Similarity=0.079 Sum_probs=224.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHccc---C-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842 89 SPNFFAFFPATVSTAGFLGEMLCACFNS---V-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164 (499)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 164 (499)
...|+++...++.++.++. .+...+.. + ...|..++.......++++++++++|.+.+ ..++|+|||+
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~ 89 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQ-AVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTE 89 (432)
T ss_dssp CCEECBTTTCCCCCHHHHH-HHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHH
T ss_pred CcEEeeCCccCCCCHHHHH-HHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHH
Confidence 3456666554444554443 33333321 1 123444556677888999999999998644 4699999999
Q ss_pred HHHHHHHHHHHHHHh---Hhhhh------cc-CCeEEEcCCCCchhHHHHHHH----hCCCCCCeEEeeCCCCCCCccCH
Q 010842 165 SILVTLIAARDRALD---AVGAE------NM-HKLVVYGSDQTHSTFAKVCKL----AGVSPANIRALPTSVDANFSLSP 230 (499)
Q Consensus 165 A~~~al~~ar~~~~~---~~~~~------g~-~~~~i~~s~~~H~s~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~ 230 (499)
|+..++.+..+.... ..+.+ +. ....|+++..+|.++.++... .|. +++.||++++ ++.+|+
T Consensus 90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~ 165 (432)
T 3a9z_A 90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKV-NGQVEV 165 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTT-TSSCCH
T ss_pred HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcc-cCCcCH
Confidence 999998887532111 00000 00 114788899999998776543 577 8999998752 358999
Q ss_pred HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC----------CEEEeeccccchhccCccchhhhc
Q 010842 231 QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG----------IWVHVDAAYAGSACICPEFRHYLN 300 (499)
Q Consensus 231 ~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~----------~~lhvD~A~g~~~~~~~~~~~~~~ 300 (499)
++|+++++++ +.+|+++.++|+||.+.|+++|.++|+++| +|+|+|++|+.+....+ ...
T Consensus 166 ~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~--- 235 (432)
T 3a9z_A 166 EDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED--- 235 (432)
T ss_dssp HHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH---
T ss_pred HHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh---
Confidence 9999988643 458899999999999999999999999999 99999999976532211 111
Q ss_pred CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC-CCCCC-cHHHHHHHH
Q 010842 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT-GRRFK-SLRLWMVLR 378 (499)
Q Consensus 301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-sr~~~-al~~~~~l~ 378 (499)
. .+|++++++||+++ |. +|+++++++... ....+.+.... . . ...+. +.... ...+..++.
T Consensus 236 -~-~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~---~~~~~~~~~~~-~----~-----~~~~~~~~~~~~~~a~~aal~ 298 (432)
T 3a9z_A 236 -L-GVDFLTIVGHKFYG-PR-IGALYVRGVGKL---TPLYPMLFGGG-Q----E-----RNFRPGTENTPMIAGLGKAAD 298 (432)
T ss_dssp -H-CCSEEEEEGGGTTC-CS-CEEEEETTBTTT---BCCCCSCCSSC-G----G-----GGTSCSCCCHHHHHHHHHHHH
T ss_pred -c-CCCEEEEehhHhcC-Cc-ceEEEEcccccc---CCcCceeecCC-c----c-----ccccCCCcCHHHHHHHHHHHH
Confidence 1 38999999999975 66 999999865311 11112111110 0 0 00011 11111 122333444
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cC-----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH----
Q 010842 379 SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VP-----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN---- 447 (499)
Q Consensus 379 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~---- 447 (499)
.+ .++++++.++..++++++.+.|++++++++. .+ ....+++|.+.... . + ...+.+.+.
T Consensus 299 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~--~~~~~~~l~~i~~ 369 (432)
T 3a9z_A 299 LV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----L--R--GYMVLAQCQTLLA 369 (432)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----C--C--HHHHHHHCSSEEC
T ss_pred HH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----C--c--HHHHHHHhcCeEE
Confidence 33 3578889999999999999999886665443 22 12236778776421 0 0 123333321
Q ss_pred hcCCEEEEee------e--ECC------EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 448 STGRVYLTHT------I--VGG------LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 448 ~~g~~~~~~~------~--~~g------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
+.|..+.... . ..| ..++|+++. ..+|++|+++++++|+++.+++.+
T Consensus 370 ~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 370 SVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp BSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred eccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1121110000 0 001 257999995 778999999999999999887643
No 71
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.1e-23 Score=212.26 Aligned_cols=318 Identities=10% Similarity=0.035 Sum_probs=211.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF-- 201 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~-- 201 (499)
++...++.+++.+++++++|.+.. .++|+|||+|+..++... . ++..|+++...|++.
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~~--------v~~~~sgt~a~~~~~~~~-~-----------~gd~vi~~~~~~~~~~~ 89 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAEAA--------VIIPGSGTYGMEAVARQL-T-----------IDEDCLIIRNGWFSYRW 89 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSEE--------EEEESCHHHHHHHHHHHH-C-----------TTCEEEEEECSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCE--------EEEcCChhHHHHHHHHhC-C-----------CCCeEEEEeCCchhHHH
Confidence 666778888899999999998743 488999999988766432 1 455677777788763
Q ss_pred HHHHHHhCCCCCCeEEeeCCCCC------C-CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842 202 AKVCKLAGVSPANIRALPTSVDA------N-FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV 271 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~~~~~------~-~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i 271 (499)
...+...|++. +++.++++..+ . ..+|+++|++++++.. +.+|++++++|++|.+.| +++|+++
T Consensus 90 ~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~~ 163 (379)
T 3ke3_A 90 TQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSEA 163 (379)
T ss_dssp HHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred HHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHHH
Confidence 34566666532 56777765311 1 2589999999996531 237888999999999999 9999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSE 350 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~ 350 (499)
|++||+++|+|++++ +....+- . .. ++|.+++++|||+++|.|+|+++++++. +..... ...++..+..
T Consensus 164 ~~~~~~~li~D~~~~-g~~~~~~-~--~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~-~~~l~~~~~~~~~~~~~-- 233 (379)
T 3ke3_A 164 VHSVGGLLVIDCIAS-GCVWLDM-K--EL---GIDVLISAPQKGWSSTPCAGLVMLSAAA-IKKVESTESNCFSLDLK-- 233 (379)
T ss_dssp HHHTTCEEEEECTTC-TTCCCCH-H--HH---TCSEEEECTTTTTCSCCCEEEEEECHHH-HHHHHTCCCSCSTTCHH--
T ss_pred HHHcCCEEEEEeccc-CCccccc-c--cc---CCCEEEecchhhcCCCCceEEEEECHHH-HHhhhcCCCCceeecHH--
Confidence 999999999999987 4322211 1 01 3899999999999999999999987653 222211 1112211000
Q ss_pred CCCcccCCCc--cc-CCCCCC-------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--Cce
Q 010842 351 SNSVVDFKDW--QV-GTGRRF-------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFA 418 (499)
Q Consensus 351 ~~~~~~~~~~--~~-~~sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~ 418 (499)
.+.+. .. .+++.+ ....+..++..+..+|++++.++..++++++++.|+++ +++++.++ ..+
T Consensus 234 -----~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~ 307 (379)
T 3ke3_A 234 -----QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAP 307 (379)
T ss_dssp -----HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCS
T ss_pred -----HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCc
Confidence 00000 00 011111 11234456666666788999999999999999999988 78876543 234
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.....+. .. ..+.+.|.++|+.+..+.. ..+..++|++++ ..+|++||++++++|+++.+++
T Consensus 308 ~i~~~~~~~--------~~--~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~-~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 308 GVVVSYTER--------DD--MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLF-GLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp SEEEEECSC--------HH--HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECC-SHHHHTCHHHHHHHHHHHHHHH
T ss_pred eEEEEccCC--------cc--hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCC-cCCCHHHHHHHHHHHHHHHHHh
Confidence 333322221 11 1124566777865433321 112467999995 7789999999999999998877
Q ss_pred h
Q 010842 494 F 494 (499)
Q Consensus 494 ~ 494 (499)
.
T Consensus 377 ~ 377 (379)
T 3ke3_A 377 L 377 (379)
T ss_dssp H
T ss_pred c
Confidence 5
No 72
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.92 E-value=1e-23 Score=212.86 Aligned_cols=326 Identities=10% Similarity=0.074 Sum_probs=221.2
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... . ..++|+|||+|+..++.+..+
T Consensus 46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------- 113 (386)
T 1u08_A 46 RYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA-----DSDITVTAGATEALYAAITALVR------- 113 (386)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT-----TTTEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCCEEEcCChHHHHHHHHHHhCC-------
Confidence 445566665554333456555668899999999999998864221 1 369999999999888877632
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|. +++.+|.+.+ +|.+|+++|++++.++ +.+|+++.++|++|.+
T Consensus 114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~ 179 (386)
T 1u08_A 114 ----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATV 179 (386)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCcc
Confidence 456788899999999999999999 9999998754 4789999999988532 4577788999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
-| +++|+++|++||+|+++|++|+.+.+......... .+....|.++.++||+++.| ..+|+++++++ +.+.
T Consensus 180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~ 257 (386)
T 1u08_A 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP--ISAE 257 (386)
T ss_dssp CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHH--HHHH
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHH--HHHH
Confidence 65 78999999999999999999987543221111111 11124789999999999744 34899888643 2222
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+.. .+ ...+...++...+ +.+++++..++..++++++.+.|++. ++++..+
T Consensus 258 l~~~~~~~~------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 316 (386)
T 1u08_A 258 IRKVHQYLT------------------FS--VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES-RLEILPC 316 (386)
T ss_dssp HHHHHHHHT------------------SS--CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCC
T ss_pred HHHHHHhhc------------------cC--CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 211100000 00 0122222222222 25667888889999999999999987 8887644
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.....+++.+.... .. ...++.++|. +.|+.+..+..+ .+..++|+++. +++++|++++++|++
T Consensus 317 ~~g~~~~~~~~~~~---~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 317 EGTYFLLVDYSAVS---TL----DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERLRQ 385 (386)
T ss_dssp CBSSEEEEECTTTC---CS----CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHHTT
T ss_pred CceEEEEEecCCCC---CC----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHHHHhh
Confidence 44456667665320 00 1345667666 467554433333 24578999996 489999999998864
No 73
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.92 E-value=6.2e-23 Score=207.50 Aligned_cols=329 Identities=13% Similarity=0.033 Sum_probs=218.7
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|....+..++++++.+++.+.+|.+... ...++|+|||+|+..++.+..+
T Consensus 47 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~-------- 113 (391)
T 3h14_A 47 RGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-----GRVVITPGSSGGFLLAFTALFD-------- 113 (391)
T ss_dssp HHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEecChHHHHHHHHHHhcC--------
Confidence 345556666665444556555667899999999999998864321 2579999999999888876632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++...++..|. +++.+|++++++|.+|+++|+++ .+.+|+++.++|++|.+-
T Consensus 114 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~~p~nptG~~~ 178 (391)
T 3h14_A 114 ---SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---------DLAGLMVASPANPTGTML 178 (391)
T ss_dssp ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---------CCeEEEECCCCCCCCccC
Confidence 456788899999999999999999 99999998766688999999876 234788889999999997
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcC
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~ 339 (499)
| +++|+++|++||+++|+|++|+.+..... .... ......+.++.+.+|+++ ....+|+++.+++. . +.+..
T Consensus 179 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~-~-~~~~~ 254 (391)
T 3h14_A 179 DHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWMVVPEDQ-V-RVVER 254 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEEECCGGG-H-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEEEeCHHH-H-HHHHH
Confidence 7 88999999999999999999987543221 1111 112235577778999997 44668888876542 2 22211
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc-
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF- 417 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~- 417 (499)
...+. +-....+..++++..+ +.+.+++..++..++++++.+.|++.+ +..+.++..
T Consensus 255 ~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~ 313 (391)
T 3h14_A 255 IAQNM--------------------FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAG-FTRIAPPDGA 313 (391)
T ss_dssp HHHHT--------------------TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCBCCCCBT
T ss_pred HHhhh--------------------ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CCcccCCCee
Confidence 00000 0001233333333333 567788888999999999999999874 443334443
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
..+++.+.... ....++.++|.++ |+.+..+..+. +..++|++++ . ++++|++++++|.++.++.
T Consensus 314 ~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~-~--~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 314 FYVYADVSDLT--------DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA-R--ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp TEEEEECTTTC--------SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC-S--CHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCccC--------CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHHHHh
Confidence 33444554311 0135667776665 85544433332 3578999996 2 7899999999999998876
Q ss_pred hcc
Q 010842 494 FKG 496 (499)
Q Consensus 494 ~~~ 496 (499)
...
T Consensus 383 ~~~ 385 (391)
T 3h14_A 383 GEG 385 (391)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 74
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.92 E-value=1.5e-23 Score=212.57 Aligned_cols=299 Identities=12% Similarity=0.061 Sum_probs=211.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
.+...+.+++.+++++++|.+. .++|+|||+|+..++.+..+ ++..|+++..+|.++..+
T Consensus 84 ~g~~~~~~~l~~~la~~~g~~~---------v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~ 143 (398)
T 3a2b_A 84 NGTLDIHVELEEKLSAYVGKEA---------AILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDG 143 (398)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHH
Confidence 3456788888999999999742 49999999999988887632 566889999999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
++..|. +++.+|. +|+++|++++++... ..+.+|+.+.++|++|.+.|+++|.++|++||+++++|++
T Consensus 144 ~~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~ 211 (398)
T 3a2b_A 144 SRLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDA 211 (398)
T ss_dssp HHHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECC
Confidence 999999 8888875 589999999865211 1356788899999999999999999999999999999999
Q ss_pred ccchhccCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842 285 YAGSACICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 285 ~g~~~~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 360 (499)
|+.+.+. ...... ..++ +++|.++.++||+++ |.| |+++.++ +.. +.+.. ...+....
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~-~~l~~~~~~~~~~~------------- 273 (398)
T 3a2b_A 212 HSLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDA-DVI-DFLKHNARSVMFSA------------- 273 (398)
T ss_dssp TTTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECH-HHH-HHHHHHCHHHHSSB-------------
T ss_pred CcccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCH-HHH-HHHHHhcccceecC-------------
Confidence 9765431 111111 1132 247999999999998 555 8888754 322 22211 11111110
Q ss_pred ccCCCCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842 361 QVGTGRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 361 ~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
....+. +..+++.+ +.++++.++..++++++.+.|++. ++++. ++..+++++.+.. ..
T Consensus 274 ------~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~---------~~ 334 (398)
T 3a2b_A 274 ------SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS---------NE 334 (398)
T ss_dssp ------CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC---------HH
T ss_pred ------CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC---------HH
Confidence 011122 22344432 335677888889999999999987 77765 4455667776632 22
Q ss_pred HHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...++.++|.++|+.+.....+. +..++|+++. ..++++++++++++|+++.+++
T Consensus 335 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 335 KTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLM-ATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEe-CCCCHHHHHHHHHHHHHHHHHh
Confidence 35678888888885543332221 3568999995 6689999999999999988765
No 75
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.92 E-value=2.8e-24 Score=217.45 Aligned_cols=309 Identities=13% Similarity=0.088 Sum_probs=208.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
.++...+++++ +++++|.+. +++++|||+|+..++.+++-. ++..|+++..+|.++.
T Consensus 54 ~~~~~~~l~~~----la~~~~~~~---------~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~ 110 (391)
T 3dr4_A 54 VGRFIVEFEKA----FADYCGVKH---------AIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASA 110 (391)
T ss_dssp CSHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHH
T ss_pred CChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHH
Confidence 45666677766 777788763 499999999999888876211 4667999999999999
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
.+++..|+ +++.+|++++ ++.+|+++|++++++++ .+|+ .++++|.+.|+++|+++|+++|+++++|
T Consensus 111 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D 177 (391)
T 3dr4_A 111 NSVTYCGA---TPVLVDNDPR-TFNLDAAKLEALITPRT------KAIM---PVHLYGQICDMDPILEVARRHNLLVIED 177 (391)
T ss_dssp HHHHHTTC---EEEEECBCTT-TCSBCGGGSGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCC---EEEEEecCcc-ccCcCHHHHHHhcCCCc------eEEE---EECCCCChhhHHHHHHHHHHcCCEEEEE
Confidence 99999999 9999999854 47999999999886432 2444 4679999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV 362 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 362 (499)
++|+.+....+... ..+..+++++++.||+++++ .+|+++.+++.... .+.....+-.... . .+ +..
T Consensus 178 ~a~~~g~~~~~~~~---~~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~-~~~~~~~~g~~~~----~--~~--~~~ 244 (391)
T 3dr4_A 178 AAEAVGATYRGKKS---GSLGDCATFSFFGNAIITTG-EGGMITTNDDDLAA-KMRLLRGQGMDPN----R--RY--WFP 244 (391)
T ss_dssp CTTCTTCEETTEET---TSSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHH-HHHHHHBTTCCTT----S--TT--CCS
T ss_pred CcccccceECCeee---cccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHH-HHHHHHhcCCCCC----C--cc--ccc
Confidence 99986544332211 11223566777799999763 46777676654321 1111000000000 0 00 011
Q ss_pred CCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--C-----CceEEEEEecCCCCCCcchh
Q 010842 363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--R-----HFALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 363 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~-----~~~~v~f~~~~~~~~~~~~~ 435 (499)
..+..+....+.+++.....++++++.++..++++++.+.|++. ++++..+ + ...++.+.+....
T Consensus 245 ~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~------- 316 (391)
T 3dr4_A 245 IVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL------- 316 (391)
T ss_dssp SCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC-------
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc-------
Confidence 12233344455555555555788899999999999999999998 8877654 1 2234556554310
Q ss_pred HHHHHHHHHHHHhcCCEEEEeee-------E-------------CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHTI-------V-------------GGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~~-------~-------------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.....++.+.|.++|+.+..+.. + .....+|+++ ++.+|++||++++++|+++
T Consensus 317 ~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 317 STTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT-HAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp SSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHH
Confidence 00145678888888865433210 0 0135799998 5899999999999999864
No 76
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=6.9e-25 Score=220.46 Aligned_cols=323 Identities=14% Similarity=0.088 Sum_probs=211.3
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
+..+.+.+...+... .|..++...++|++ +++++|.+. +++++|||+|+..++.++.-.
T Consensus 16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sgt~al~~~l~~l~~~------ 74 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQE----FADYCNVNY---------CIGCGNGLDALHLILKGYDIG------ 74 (373)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHTSSE---------EEEESCHHHHHHHHHHHTTCC------
T ss_pred CHHHHHHHHHHHHCC--CccCCchHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCCC------
Confidence 334444455444432 24556777777777 777788753 499999999999888876211
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++++++ +.+|+ +++++|.+
T Consensus 75 ----~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~ 137 (373)
T 3frk_A 75 ----FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEK------TKAII---AVHLYGQP 137 (373)
T ss_dssp ----TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTT------EEEEE---EECCTTCC
T ss_pred ----CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCC------CeEEE---EECCCcCc
Confidence 466899999999999999999999 9999999854 4799999999988653 33454 56789999
Q ss_pred CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 263 DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 263 d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
.|+++|.++|+++|+++|+|+||+.+...... . .+ ..+|.++++ +||+++.+..+|+++.+++....+.....
T Consensus 138 ~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~--~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~ 212 (373)
T 3frk_A 138 ADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM--K--VG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALS 212 (373)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTE--E--TT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCEECCE--e--cc-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999865432211 1 11 125777766 77999764456777776654322111000
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---c
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---F 417 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~ 417 (499)
.+-... .+. ....+..+....+.+++.....+++++..++..++++++.+.|++++ +++...+. .
T Consensus 213 -~~g~~~--------~~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 280 (373)
T 3frk_A 213 -NYGSEK--------KYH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKH 280 (373)
T ss_dssp -BTTCSB--------TTB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEEC
T ss_pred -hcCccc--------CCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCce
Confidence 000000 000 01112222333444444444457788899999999999999999987 76543221 1
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eEC---------------------CEEEEEEeccCCCC
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVG---------------------GLYMLRFAVGASLT 474 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~---------------------g~~~lRi~~~~~~~ 474 (499)
+.+.|.+.... ...+.+.|.++|+.+-... ... ....+|+++ ++.+
T Consensus 281 ~~~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~ 349 (373)
T 3frk_A 281 VWYTFVIRSEK----------RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPI-WYGM 349 (373)
T ss_dssp CCSSEEEEESS----------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECC-CTTC
T ss_pred eeEEEEEEeCC----------HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccC-CCCC
Confidence 11222222211 4567788888886432111 000 115799999 5999
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEGAD 491 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~ 491 (499)
|++||++++++|++...
T Consensus 350 t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 350 KNEEIEYVIDKINAWKL 366 (373)
T ss_dssp CHHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999987644
No 77
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.92 E-value=2.4e-23 Score=226.00 Aligned_cols=313 Identities=14% Similarity=0.103 Sum_probs=211.9
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
+..+.+++++|.+.. .++++|+|+||..++.+... ++..|+++...|.|+..++...|+
T Consensus 209 ~~ee~la~l~G~d~~--------i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~-- 267 (755)
T 2vyc_A 209 ESEKYAARVFGADRS--------WSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA-- 267 (755)
T ss_dssp HHHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhCCCce--------EEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC--
Confidence 344669999998754 26777777888888877632 567899999999999999999999
Q ss_pred CCeEEeeCCCCCCC----cc-----CHHHHHHHHHHH--HH--cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 213 ANIRALPTSVDANF----SL-----SPQLLRRAVEAD--VE--AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 213 ~~v~~v~~~~~~~~----~~-----d~~~L~~~i~~~--~~--~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.++.++.+.+ +| .+ |+++|+++|++. ++ .+.+|.+|+++++ |++|.+.|+++|+++|++||+++
T Consensus 268 -~~v~v~~~~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~l 344 (755)
T 2vyc_A 268 -KPVYMVPSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRL 344 (755)
T ss_dssp -EEEEECCCBC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEE
T ss_pred -EEEEEeCCCC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEE
Confidence 9999988643 22 35 999999999863 22 4556667888887 68999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCC--Cce------eEecccccccCCCcceEEEEeCc--hhHHHhhcCCccCCCCCCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIER--VDS------FSFSPHKWLLSYLDCCCLWVKQP--GLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~--aDs------i~~~~hK~l~~p~~~g~l~~r~~--~~l~~~~~~~~~yl~~~~~ 349 (499)
|||+||+++..+.+.++... .+.. +|+ ++.++||++++|.++|++++++. ..-...+......+
T Consensus 345 ivDeA~~~~~~~~~~~~~~~-~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~----- 418 (755)
T 2vyc_A 345 HFDEAWYGYARFNPIYADHY-AMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH----- 418 (755)
T ss_dssp EEECTTCTTGGGCGGGTTSS-SSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT-----
T ss_pred EEECcCchhcccCcccCCcc-hhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh-----
Confidence 99999987654444332111 1123 676 99999999999988999999875 11000010000000
Q ss_pred CCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEEcCCCc-
Q 010842 350 ESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR---------FEIVVPRHF- 417 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---------~~~~~~~~~- 417 (499)
+.+.+. ....+-++++.+..+|.++++++..++++++++.|+++++ ++++.+...
T Consensus 419 -------------~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~ 485 (755)
T 2vyc_A 419 -------------ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVT 485 (755)
T ss_dssp -------------SCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEE
T ss_pred -------------CCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcc
Confidence 111111 1234445666665565678899999999999999998877 777654311
Q ss_pred ------------------------------------------------eEEEEEecCCCCCCc-chhHHHHHHHHHHHHh
Q 010842 418 ------------------------------------------------ALVCFRLNPYPHSGS-ADTEMLNRKLLDWVNS 448 (499)
Q Consensus 418 ------------------------------------------------~~v~f~~~~~~~~~~-~~~~~~~~~l~~~l~~ 448 (499)
..++|...+.+..+. .+.......+.+.|.+
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~ 565 (755)
T 2vyc_A 486 DPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGR 565 (755)
T ss_dssp CTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHT
T ss_pred ccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHH
Confidence 244555542110000 0000112455566666
Q ss_pred cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 449 TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 449 ~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.|+.. .. .+.+.+|+++ ++.+|++++++++++|.++.+..
T Consensus 566 ~gI~~-e~---~~~~~v~~~~-~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 566 HGIVP-TR---TTDFQIMFLF-SMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TTCCC-SE---ECSSEEEEEC-CTTCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCEE-ee---cCCCeEEEEE-CCCCCHHHHHHHHHHHHHHHHhh
Confidence 67432 11 2446689988 58899999999999999997655
No 78
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=1.3e-22 Score=207.67 Aligned_cols=323 Identities=11% Similarity=0.047 Sum_probs=219.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC----CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLP----KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD 195 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~----~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~ 195 (499)
.|....+..++++++.+|+.+.+|.+ .+ ..++++|+|+++..++.+..+ ++..|+++.
T Consensus 78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~-------~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~ 139 (428)
T 1iay_A 78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-------RVVMAGGATGANETIIFCLAD-----------PGDAFLVPS 139 (428)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-------SCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEES
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh-------hEEEccChHHHHHHHHHHhCC-----------CCCeEEEcc
Confidence 34433457899999999999888843 32 358999999999888877642 456788899
Q ss_pred CCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842 196 QTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV 271 (499)
Q Consensus 196 ~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i 271 (499)
.+|.++...+ ...|+ +++.+|.+.+++|.+|+++|++++++....+..+.+|+++.++|++|.+.| +++|+++
T Consensus 140 p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 216 (428)
T 1iay_A 140 PYYPAFNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF 216 (428)
T ss_dssp SCCTTHHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCcchHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHH
Confidence 9999988755 46788 899999875445789999999999876555555677888999999999999 9999999
Q ss_pred HHHhCCEEEeeccccchhccCccc---hhhhcC----CCCCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEF---RHYLNG----IERVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~---~~~~~g----~~~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
|++||+++++|++|+++.+..... ...... --..| .++.+.||+++.| ..+|+++..++... +.+....
T Consensus 217 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~-~~~~~~~ 295 (428)
T 1iay_A 217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVV-NCARKMS 295 (428)
T ss_dssp HHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHH-HHHHHHH
T ss_pred HHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHH-HHHHHHH
Confidence 999999999999998854321111 111111 00157 6789999999754 45799888655433 2221110
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
.+. ....+...++...+.. +.+++..++..++++++.+.|+++ +++++.+..
T Consensus 296 ~~~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 352 (428)
T 1iay_A 296 SFG----------------------LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNA 352 (428)
T ss_dssp TTS----------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSS
T ss_pred hcc----------------------cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCe
Confidence 000 0123344444444422 256777888889999999999988 777654334
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+.+++++.... ... ......++.++|.++ |+.+..+..+. +..++|+++. ..+++++++++++|+++.++
T Consensus 353 g~~~~~~~~~~~--~~~-~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 353 GLFCWMDLRPLL--RES-TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp SSEEEEECGGGC--SSS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEechhhc--CCC-chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHHhc
Confidence 556667764311 000 012345678888876 75544433332 2468999995 37999999999999987653
No 79
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=3.7e-24 Score=222.39 Aligned_cols=326 Identities=13% Similarity=0.066 Sum_probs=205.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST 200 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s 200 (499)
|..++...++|+.+++++++++|.+.+.+ ...+++++|++||+.++.+..+ ++..|+++...|.+
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~~----~~~V~~~sGs~an~~~~~all~-----------pGD~Vl~~~~~~~~ 146 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQCW----GVNVQPYSGSPANFAVYTALVE-----------PHGRIMGLDLPDGG 146 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHTC-----------TTCEEEEECGGGTC
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCcccC----ceEEEECCcHHHHHHHHHHhcC-----------CCCEEEEecCccCc
Confidence 45566778999999999999999974310 0125556666888777765532 57788888888876
Q ss_pred HHH--------HHHHhCCCCCCeEEeeC--CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842 201 FAK--------VCKLAGVSPANIRALPT--SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE 270 (499)
Q Consensus 201 ~~k--------a~~~~G~g~~~v~~v~~--~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ 270 (499)
+.. .+...|. .++.+++ +++ ++.+|+++|++++++. +|.+|++ ++++++ .+.|+++|++
T Consensus 147 ~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~~-~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~ 215 (483)
T 1rv3_A 147 HLTHGFMTDKKKISATSI---FFESMAYKVNPD-TGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRK 215 (483)
T ss_dssp CGGGCCBCSSCBCSHHHH---HSEEEEECBCTT-TCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHH
T ss_pred CcchhhhhcccCcccccc---eEEEEECccccC-CCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHH
Confidence 543 2334443 2455554 533 4799999999999742 1336666 666666 8899999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh-HHHhhcCCccCCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL-LVKALSTDPEYLKNKPS 349 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~-l~~~~~~~~~yl~~~~~ 349 (499)
+|+++|+++|+|+||+.+....+.....+ ..+|++++++||++.+|.+ |+++++++.. +...-.....| .
T Consensus 216 ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y--~--- 286 (483)
T 1rv3_A 216 IADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILY--N--- 286 (483)
T ss_dssp HHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBC--C---
T ss_pred HHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhh--H---
Confidence 99999999999999875543322211111 2589999999999988987 9999987521 00000000000 0
Q ss_pred CCCCcccCC-CcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecC
Q 010842 350 ESNSVVDFK-DWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNP 426 (499)
Q Consensus 350 ~~~~~~~~~-~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~ 426 (499)
.....+.. ....+++.... ...+..++......+++++.++..++++++.+.|++. +++++.+. ....+.+.+.+
T Consensus 287 -~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~ 364 (483)
T 1rv3_A 287 -LESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRS 364 (483)
T ss_dssp -HHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGG
T ss_pred -HHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccC
Confidence 00000000 00011111111 2344556666656788999999999999999999988 89987542 22344444433
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEE---eee--ECCEEEEEEeccCCCCc----HHHHHHHHHHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTI--VGGLYMLRFAVGASLTD----ERHVVAAWELIMEGADR 492 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~--~~g~~~lRi~~~~~~~t----~~di~~l~~~l~~~~~~ 492 (499)
.+ . ...++.+.|.+.|+.+.. +.. ..+..++|+++. ..+| ++|++++++.|.++.+.
T Consensus 365 ~g------~--~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~-~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 365 KG------T--DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTP-ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp GT------C--CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECH-HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC------C--CHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecC-CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 11 0 033455666667754331 221 113467999995 5556 99999999999988765
No 80
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=2e-23 Score=209.85 Aligned_cols=312 Identities=11% Similarity=0.087 Sum_probs=212.6
Q ss_pred cCCcccccChhhHHHHHHHHHHHHHHc-CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842 116 SVGFNWLASPASTELEIVVMDWLATML-KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS 194 (499)
Q Consensus 116 ~~~~~~~~~p~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s 194 (499)
.....|...++..+++++ +++++ +.+.+ ..++|+|||+|+..++.+..+ ++..|+++
T Consensus 54 ~~~~~y~~~~g~~~l~~~----la~~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~ 111 (375)
T 3op7_A 54 GTKLNYGWIEGSPAFKKS----VSQLYTGVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISL 111 (375)
T ss_dssp TSCCSSCCTTCCHHHHHH----HHTTSSSCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred cCCcCCCCCCChHHHHHH----HHHHhccCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEe
Confidence 334456556667788888 55555 34433 469999999999988876632 56678889
Q ss_pred CCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842 195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV 271 (499)
Q Consensus 195 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i 271 (499)
..+|.++..+++..|. +++.+|++.+++|.+|+++|+++++++ +.+|+++.++|++|.+-| +++|+++
T Consensus 112 ~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~l 182 (375)
T 3op7_A 112 YPTYQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEI 182 (375)
T ss_dssp ESSCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 999999885555789999999998643 337788899999999999 9999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
|++||+++++|++|+.+... ...... .....+.+..+.+|+++.| ..+|+++. +++.. +.+.....+..
T Consensus 183 a~~~~~~li~De~~~~~~~~--~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~-~~~~~~~~~~~----- 252 (375)
T 3op7_A 183 ASEVGAYILSDEVYRSFSEL--DVPSII-EVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVT-DILRDYRDYTM----- 252 (375)
T ss_dssp HHTTTCEEEEECCSCCCSSS--CCCCHH-HHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHH-HHHTTTGGGTT-----
T ss_pred HHHcCCEEEEEccccccccc--CCCchh-hhcCCEEEEeEChhhcCCcccceEEEEe-CHHHH-HHHHHHHhhhc-----
Confidence 99999999999999875432 111111 1112457788899999744 55788877 44333 33322211110
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCC
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYP 428 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~ 428 (499)
.....+..+++...+. .+.+++..++..++++++.+.|++.|++++..+.....+.+.+....
T Consensus 253 ---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (375)
T 3op7_A 253 ---------------ICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM 317 (375)
T ss_dssp ---------------SCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS
T ss_pred ---------------cCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC
Confidence 0112333333333332 34456666777888999999999988998765444334444443211
Q ss_pred CCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 429 HSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
...++.+++ .+.|+.+..+..+....++|++++ .+.++|++++++|.++.+++.+
T Consensus 318 ---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 318 ---------PMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFA---CEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp ---------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCC---SCHHHHHHHHHHHHHHHGGGC-
T ss_pred ---------CHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHHhh
Confidence 134566666 466865544444444578999986 3458999999999998876643
No 81
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=6.7e-24 Score=213.14 Aligned_cols=321 Identities=14% Similarity=0.099 Sum_probs=214.5
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+.+...+... .|...+...+++++ +++++|.+. .++++|||+|+..++.+++-.
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~~~~~~~~~--------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFEKR----FAALHNAPH---------AIGVGTGTDALAMSFKMLNIG--------- 76 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcC--CcccChhHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 555555555432 34456666666666 888888763 489999999998888766211
Q ss_pred cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh
Q 010842 186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV 265 (499)
Q Consensus 186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l 265 (499)
++..|+++..+|.++..+++..|+ +++.+|++. ++.+|+++|+++++++ +.+|+ ++|++|.+.|+
T Consensus 77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~ 141 (374)
T 3uwc_A 77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADM 141 (374)
T ss_dssp -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCH
Confidence 466789999999999999999999 999999873 4699999999988653 22444 77899999999
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
++|+++|++||+++|+|++|+.+........ + ..+|.+++++| |+++.+..+|+++.+++.............
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~----~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~ 216 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKFV----G-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHG 216 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEET----T-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCeec----c-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcC
Confidence 9999999999999999999986543221111 1 12699999977 999864457777777654332111111000
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEcCCCc---eE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIVVPRHF---AL 419 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~~---~~ 419 (499)
... .+. ....+..+....+.+++.....++++++.++..++++++.+.|+++++ +++...+.. ..
T Consensus 217 ~~~---------~~~--~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 285 (374)
T 3uwc_A 217 LIN---------RDV--CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF 285 (374)
T ss_dssp EEE---------TTE--ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred ccc---------cCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence 000 000 001112223334444554445577888999999999999999999988 887543321 11
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eE------C---------------CEEEEEEeccCCCCcH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IV------G---------------GLYMLRFAVGASLTDE 476 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~---------------g~~~lRi~~~~~~~t~ 476 (499)
+.|...... ..++.+.|.++|+.+.... .. . ....+|+++ ++.+|+
T Consensus 286 ~~~~~~~~~----------~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~ 354 (374)
T 3uwc_A 286 HIYVLRVKY----------RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPA-HPYLTE 354 (374)
T ss_dssp SSEEEEETT----------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECC-CTTSCH
T ss_pred EEEEEEcCC----------HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccC-CCCCCH
Confidence 122222111 4567777888886432221 00 0 126799998 588999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEGADR 492 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~ 492 (499)
+||++++++|+++.++
T Consensus 355 edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 355 EEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 82
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.8e-22 Score=210.70 Aligned_cols=330 Identities=12% Similarity=0.052 Sum_probs=223.1
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~ 197 (499)
...|..+++...+++++.+|+.+..|.+... ...++|+|+|+|+..++.+.... ++..|+++.++
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~~----------~gd~Vlv~~p~ 191 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDGFPANA-----DDIFLTDGASPGVHLMMQLLIRN----------EKDGILVPIPQ 191 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-----GGEEEESSSHHHHHHHHHHHCCS----------TTEEEEEEESC
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC----------CCCEEEEeCCC
Confidence 4577788888999999999999988865321 25699999999998888765311 56789999999
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANE 274 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~ 274 (499)
|.++..+++..|. +++.+|++++++|.+|+++|+++|++..+.+..+.+|+++.++||||.+ +++++|+++|++
T Consensus 192 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~ 268 (500)
T 3tcm_A 192 YPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKN 268 (500)
T ss_dssp CTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred cHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999987678999999999999877667677788888999999999 457778888999
Q ss_pred hCCEEEeeccccchhccCc----cchhhhcCC----CCCcee-Eecccccc-cCC-CcceEEEEe--CchhHHHhhcCCc
Q 010842 275 YGIWVHVDAAYAGSACICP----EFRHYLNGI----ERVDSF-SFSPHKWL-LSY-LDCCCLWVK--QPGLLVKALSTDP 341 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~----~~~~~~~g~----~~aDsi-~~~~hK~l-~~p-~~~g~l~~r--~~~~l~~~~~~~~ 341 (499)
||+++++|++|+.+.+... ........+ .....+ ..+.+|.+ +.| ..+|++.+. ++... +.+....
T Consensus 269 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~-~~l~~~~ 347 (500)
T 3tcm_A 269 EGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR-EQIYKIA 347 (500)
T ss_dssp HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH-HHHHHHH
T ss_pred cCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH-HHHHHHH
Confidence 9999999999987644211 111111111 122333 45889998 333 457888763 33332 2221100
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKSDPRF 409 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 409 (499)
.... ++ ..+..+++...+. .+..+++.++..++++++.+.|+++|++
T Consensus 348 ~~~~------------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~ 406 (500)
T 3tcm_A 348 SVNL------------------CS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGI 406 (500)
T ss_dssp HTTC------------------CC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred hccc------------------CC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 0000 00 1222232222221 1345666777888999999999999999
Q ss_pred EEEcCCCceEEEE-EecCCCCCCcchhHH-------HHHHH-HHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHH
Q 010842 410 EIVVPRHFALVCF-RLNPYPHSGSADTEM-------LNRKL-LDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDER 477 (499)
Q Consensus 410 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~-------~~~~l-~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~ 477 (499)
++. +|+.+++.| ++..+. ..++. ....+ .+.|.+.|+.+..+..+ .+..++|++++ ++++
T Consensus 407 ~~~-~~~g~~~~~~~~~lp~----~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~---~~~e 478 (500)
T 3tcm_A 407 TCN-EAEGAMYVFPQICLPQ----KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL---PQED 478 (500)
T ss_dssp ECC-CCCBTTEECCEECCCH----HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC---SCTT
T ss_pred EEe-cCCeEEEEeeeecCch----hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC---CCHH
Confidence 876 455555544 232110 00000 01222 34455568655544333 34568999996 7889
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 010842 478 HVVAAWELIMEGADRLFK 495 (499)
Q Consensus 478 di~~l~~~l~~~~~~l~~ 495 (499)
+|++++++|.++.+++.+
T Consensus 479 ~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 479 KIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887754
No 83
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.91 E-value=9.4e-24 Score=209.85 Aligned_cols=335 Identities=12% Similarity=0.038 Sum_probs=219.9
Q ss_pred cccccCCCCCChHHHHHHHHHHHcc---cC-Cccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCCh
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFN---SV-GFNW---LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTT 162 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n---~~-~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~gg 162 (499)
+.+.|.|++...|..+.+.+...+. .| ...+ ..++.+.++-+++++.+++++|.++.. ..+| |+||
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcH
Confidence 4456777777776666666665442 12 1111 125566777788899999999996431 3477 9999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
|+|+-+++.... . |....+|+.+..+|.++ +.++..|+ ++..+++++++.+.++++. + |+++++
T Consensus 79 T~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~~~-~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t~ 142 (361)
T 3m5u_A 79 SLQFAMIPMNLA-L--------NGVCEYANTGVWTKKAI-KEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNAD 142 (361)
T ss_dssp HHHHHHHHHHHC-C--------SSCEEEEECSHHHHHHH-HHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTSS
T ss_pred HHHHHHHHHhcC-C--------CCeEEEEeCCHHHHHHH-HHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCCC
Confidence 999887776542 1 11223455555555433 44566788 9999999876523256665 3 655443
Q ss_pred cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+|.+++.+|.+|.+.|. +++ +|+++|||++++.+....+ +...|.+++++|||++ |.|+
T Consensus 143 ------lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id--------~~~~d~~~~s~~K~~g-p~G~ 201 (361)
T 3m5u_A 143 ------YAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD--------FSNIALFYGGVQKNAG-ISGL 201 (361)
T ss_dssp ------EEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC--------CTTEEEEEEETTTTSS-CTTC
T ss_pred ------EEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC--------cccCCEEEEechhccC-CCcc
Confidence 78889999999998552 334 4999999999987755433 2237999999999996 9999
Q ss_pred eEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRL 395 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~ 395 (499)
|++++|++.. .+... ..+.|+.... ..-...+.+ ....+..+++.+-.. |++++.++..++
T Consensus 202 g~l~~~~~~~-~~~~~~~~p~~~~~~~-----------~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l 269 (361)
T 3m5u_A 202 SCIFIRKDML-ERSKNKQIPSMLNYLT-----------HAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQK 269 (361)
T ss_dssp EEEEEEHHHH-HHHHTCCCCGGGCHHH-----------HHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEEcHHHH-hhhcCCCCCceeehHH-----------HhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 9999987542 22211 2233321100 000011111 124556667766666 799999999999
Q ss_pred HHHHHHHHhcCCCe-EEEcCC--C-ceEEEEEecC-CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEecc
Q 010842 396 AKMFEGFVKSDPRF-EIVVPR--H-FALVCFRLNP-YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVG 470 (499)
Q Consensus 396 a~~l~~~L~~~~~~-~~~~~~--~-~~~v~f~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~ 470 (499)
++++++.|++++++ +++.++ . ..+++|.+.+ .. .+ ..+...|.++|+....+ ......+|++++
T Consensus 270 ~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~------~~---~~~~~~L~~~gI~~~~g--~~~~g~iRiS~~ 338 (361)
T 3m5u_A 270 ATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD------LE---PLFVKEAEEAGMIGLKG--HRILGGIRASIY 338 (361)
T ss_dssp HHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT------HH---HHHHHHHHHTTEECCBC--CTTTCSEEEECC
T ss_pred HHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh------hh---HHHHHHHHHCCCEEecC--CCccCeEEEEcc
Confidence 99999999999876 654332 2 3578898864 21 12 35667777788543222 112245999996
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~~~~~~ 492 (499)
..+|++|||+++++|+++.++
T Consensus 339 -~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 339 -NALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp -TTSCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHh
Confidence 779999999999999998765
No 84
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=3.1e-23 Score=209.41 Aligned_cols=325 Identities=14% Similarity=0.089 Sum_probs=217.6
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|....+..++++++.+|+.+.+|.+.+. ...++|+|||+|+..++.+..+
T Consensus 48 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~l~~--------- 113 (385)
T 1b5p_A 48 HVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD--------- 113 (385)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HHEEEcCChHHHHHHHHHHhcC---------
Confidence 34444444443323345555567899999999999888864211 1468999999999888876532
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++.++|..+..+++..|. +++.+|++++++|.+|+++|+++++++ +.+|+.+.++||||.+-+
T Consensus 114 --~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~ 182 (385)
T 1b5p_A 114 --PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYP 182 (385)
T ss_dssp --TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcC
Confidence 466788899999999999999999 999999985335789999999988643 347888899999999855
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
+++|+++|++||+++++|++|+.+.... .... +..+. ..+.+..+++|+++.| ..+|+++.++. .. +.+..
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~-~~-~~l~~ 258 (385)
T 1b5p_A 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE-VI-KAMAS 258 (385)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHH-HH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCHH-HH-HHHHH
Confidence 8999999999999999999998754311 1111 11111 3467788999999755 34888887542 22 22211
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
...+. +.....+..+++...+ +.+.+++..++..++++++.+.|+++ ++++..+
T Consensus 259 ~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 317 (385)
T 1b5p_A 259 VSRQS--------------------TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRP 317 (385)
T ss_dssp HHHTT--------------------TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCC
T ss_pred HHhhc--------------------cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 00000 0011233444443333 34557778888888899999999887 7776543
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.....+...+...+ ....++.+.|.++|+.+..+..+....++|++++ +++++|+++++.|.++.
T Consensus 318 ~~~~~~~~~~~~~~--------~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 318 SGAFYVLMDTSPIA--------PDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARVL 382 (385)
T ss_dssp SBTTEEEEECTTTC--------SSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGGC
T ss_pred CeeEEEEEecCCCC--------CCHHHHHHHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 33233344443111 0135677777777865544444432457999985 68889999999887654
No 85
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.1e-23 Score=214.51 Aligned_cols=334 Identities=13% Similarity=0.085 Sum_probs=223.5
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... . ..++|+|||+|+..++.+..+
T Consensus 41 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~------- 108 (411)
T 2o0r_A 41 PKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE------- 108 (411)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC-------
Confidence 345555555554333456555667899999999999998864221 1 368999999999988877632
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++..+|.++..+++..|. +++.+|++.+ ++|.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 109 ----~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~ 175 (411)
T 2o0r_A 109 ----PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGA 175 (411)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred ----CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCC
Confidence 456788899999999999999999 9999998753 23679999999988642 447788899999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK 335 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~ 335 (499)
+-| +++|+++|++||+++++|++|+++.+........ +.+....|.++.++||+++.| ..+|++++++ +.. +
T Consensus 176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~ 253 (411)
T 2o0r_A 176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA-ELI-A 253 (411)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH-HHH-H
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH-HHH-H
Confidence 955 5999999999999999999998764321111111 111234789999999998744 3489988853 322 2
Q ss_pred hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.+.....+.. + .........+..++.. +.+++++..++..++++++.+.|++. ++++..+.
T Consensus 254 ~l~~~~~~~~--------------~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 314 (411)
T 2o0r_A 254 GVRAAKQYLS--------------Y---VGGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSY 314 (411)
T ss_dssp HHHHHHHHHT--------------S---CCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCC
T ss_pred HHHHHHhhcc--------------C---CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCC
Confidence 2211111100 0 0001111223333432 35678888889999999999999887 78876443
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-C------------CEEEEEEeccCCCCcHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV-G------------GLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-~------------g~~~lRi~~~~~~~t~~di~~ 481 (499)
....+++.+.... .. ...++.++|. +.|+.+..+..+ . +..++|+++. .++++|++
T Consensus 315 ~g~~~~~~~~~~~---~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~---~~~e~i~~ 384 (411)
T 2o0r_A 315 GTYFLCADPRPLG---YD----DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC---KRDDTLDE 384 (411)
T ss_dssp BSSEEEEECGGGT---CC----CHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC---SCHHHHHH
T ss_pred eeEEEEEecCCCC---CC----CHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec---CCHHHHHH
Confidence 3335667765310 00 0345666665 457654443333 1 3468999985 37899999
Q ss_pred HHHHHHHHHHHH
Q 010842 482 AWELIMEGADRL 493 (499)
Q Consensus 482 l~~~l~~~~~~l 493 (499)
++++|.++.++.
T Consensus 385 ~~~~l~~~~~~~ 396 (411)
T 2o0r_A 385 AIRRLSVLAERP 396 (411)
T ss_dssp HHHHHGGGGC--
T ss_pred HHHHHHHHHhcc
Confidence 999998865543
No 86
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.91 E-value=5.8e-23 Score=208.13 Aligned_cols=327 Identities=9% Similarity=0.056 Sum_probs=219.7
Q ss_pred HHHHHHHHHHcccC----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 104 GFLGEMLCACFNSV----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 104 ~~~~~~l~~~~n~~----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
..+.+.+...+... ...|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+..+
T Consensus 51 ~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~~~g~~~al~~~~~~l~~---- 121 (398)
T 3ele_A 51 QIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA-----DNLYMTMGAAASLSICFRALTS---- 121 (398)
T ss_dssp HHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh-----HHEEEccCHHHHHHHHHHHHcC----
Confidence 34445555444332 2345555667899999999999999864221 2469999999999988887632
Q ss_pred HhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 180 AVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 180 ~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
++ ..|+++.++|.++...++..|. +++.+|++++ ++.+|+++|+++++++ +.+|+++.++|+
T Consensus 122 -------~g~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~np 184 (398)
T 3ele_A 122 -------DAYDEFITIAPYFPEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNNP 184 (398)
T ss_dssp -------STTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCTT
T ss_pred -------CCCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCCC
Confidence 45 6788899999999999999999 9999999865 4899999999988643 447888899999
Q ss_pred ccccCC---hhHHHHHHHH------hCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEe
Q 010842 259 TTAVDN---VEPLAEVANE------YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVK 328 (499)
Q Consensus 259 ~G~id~---l~~I~~ia~~------~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r 328 (499)
||.+-| +++|+++|++ ||+++++|++|+.+....... .........+.++.+.+|+++ .+..+|+++++
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 263 (398)
T 3ele_A 185 SGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKV-PFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVP 263 (398)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCC-CCGGGTCSSEEEEEESTTTSSCTTTCCEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCc-CChHhhcCCeEEEEehhhcCCCccceeEEEEEc
Confidence 999977 7777789999 999999999998754321111 111122235678889999997 44678999887
Q ss_pred Cchh----HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842 329 QPGL----LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 329 ~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~ 404 (499)
+... +...+........ ......+..++....+.... ..++..++++++.+.|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~ 321 (398)
T 3ele_A 264 DEVYDKAELYAAVCGAGRALG-------------------YVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLT 321 (398)
T ss_dssp TTSTTHHHHHHHHHHHHHHTT-------------------CCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhhhcc-------------------ccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHH
Confidence 6521 1111100000000 00011233333333222111 34566677888888888
Q ss_pred cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
+. ++++..+.....+++.+.... ..++.+.|.++|+.+..+..+....++|++++ +++++|+++++
T Consensus 322 ~~-g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~ 387 (398)
T 3ele_A 322 RI-GYHCFKPDGAFYMFVKALEDD----------SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMP 387 (398)
T ss_dssp HH-TCCEECCSBSSEEEEECSSSC----------HHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHH
T ss_pred Hc-CCeecCCCeeEEEEEEcCCCC----------HHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHH
Confidence 76 777764443333566654321 45677778788865544444444568999984 68999999999
Q ss_pred HHHHHHHHH
Q 010842 485 LIMEGADRL 493 (499)
Q Consensus 485 ~l~~~~~~l 493 (499)
+|.++.+++
T Consensus 388 ~l~~~l~~~ 396 (398)
T 3ele_A 388 AFEKIYKKY 396 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988765
No 87
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.91 E-value=3.9e-22 Score=205.41 Aligned_cols=336 Identities=11% Similarity=0.075 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
+..+.+.+...+... ...|...++..++++++.+++.+.+|.+ .+ ..++|+|+|+|+..++.+..+
T Consensus 93 ~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~v~~t~G~~~al~~~~~~l~~--- 162 (448)
T 3aow_A 93 KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDN-------DIMITSGSQQALDLIGRVFLN--- 162 (448)
T ss_dssp HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTS-------EEEEESSHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChh-------hEEEeCcHHHHHHHHHHHHcC---
Confidence 445555555554332 1345555678899999889888888984 22 469999999999888877632
Q ss_pred hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCC
Q 010842 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTT 257 (499)
Q Consensus 179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt 257 (499)
++..|++...+|.++..+++..|. +++.||.+++ .+|+++|+++++.....+.++.+| +...++|
T Consensus 163 --------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N 228 (448)
T 3aow_A 163 --------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228 (448)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence 466788899999999999999999 9999998764 499999999997432232345565 5678899
Q ss_pred cccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842 258 STTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL 333 (499)
Q Consensus 258 ~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l 333 (499)
+||.+-+ +++|+++|++||+++++|++|+.+.+.......... +....+.+..+.+|+++....+|+++.+++ ..
T Consensus 229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~-l~ 307 (448)
T 3aow_A 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPG-II 307 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHH-HH
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHH-HH
Confidence 9999965 579999999999999999999876432111111110 112245677888999983245899988643 22
Q ss_pred HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhc-CC-
Q 010842 334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKS-DP- 407 (499)
Q Consensus 334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~-~~- 407 (499)
+.+....... +. ++ ..+..+++...+. .+.++++.++..++++++.+.|++ .|
T Consensus 308 -~~l~~~~~~~----------------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 366 (448)
T 3aow_A 308 -RKMEIAKQST----------------DL-CT---NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE 366 (448)
T ss_dssp -HHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred -HHHHHHHHHh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2221110000 00 00 2333344433332 244666677777888999999986 57
Q ss_pred CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHH
Q 010842 408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
++++..+.....+++++.... ...++.++|.++|+.+..+..+ .+..++|+++. . .++++|++++
T Consensus 367 g~~~~~p~~g~~~~v~~~~~~---------~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~-~-~~~e~i~~~~ 435 (448)
T 3aow_A 367 GVKWTKPEGGMFIWVTLPDGI---------DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFT-Y-VDEDKIMEGI 435 (448)
T ss_dssp TCEECCCSBSSEEEEECSTTC---------CHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECS-S-SCTHHHHHHH
T ss_pred CeEEeCCCccEEEEEEcCCCC---------CHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeC-C-CCHHHHHHHH
Confidence 688764444555666664311 1356778888888655544433 24578999996 3 4889999999
Q ss_pred HHHHHHHHHHhc
Q 010842 484 ELIMEGADRLFK 495 (499)
Q Consensus 484 ~~l~~~~~~l~~ 495 (499)
++|.++.+++.+
T Consensus 436 ~~L~~~l~~~~~ 447 (448)
T 3aow_A 436 KRLAETIKEELK 447 (448)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
No 88
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=1.8e-23 Score=210.72 Aligned_cols=318 Identities=14% Similarity=0.081 Sum_probs=213.7
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+.. ...|...+...++++. +++++|.+.+ ..++|+|||+|+..++.+...
T Consensus 41 ~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~-------- 100 (381)
T 1v2d_A 41 PFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG-------- 100 (381)
T ss_dssp HHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC--------
Confidence 3455555555543 2345544456667766 6666887654 369999999999988887632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++..+|.++..+++..|+ +++.+|++ ++ ++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 101 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~ 167 (381)
T 1v2d_A 101 ---PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTGL 167 (381)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCCC
Confidence 456788899999999999999999 99999987 33 3689999999988532 457888899999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
+-| +++|+++|++||+++|+|++|+++.+ .........-....|.++.++||+++.| ..+|+++++++ .. +.+
T Consensus 168 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~~ 244 (381)
T 1v2d_A 168 VFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FM-PRL 244 (381)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-TH-HHH
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HH-HHH
Confidence 965 89999999999999999999987643 1111111110235899999999998744 34899888653 22 222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--G--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.....+.. + + ...+..+++...+ + .++++++.++..++++++.+.|++. ++++..
T Consensus 245 ~~~~~~~~--------------~----~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 303 (381)
T 1v2d_A 245 AGMRQWTS--------------F----S--APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYV 303 (381)
T ss_dssp HHHHHHHT--------------S----S--CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred HHHHhhcc--------------c----C--CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC
Confidence 11000000 0 0 0122222222222 2 4567888899999999999999985 888775
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+.....+++.+.+. + +.+.+.+.|+.+..+..+. +..++|+++. . ++++|+++++.|.++
T Consensus 304 ~~~~~~~~~~~~~~------------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~-~--~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 304 PEGTYFLMAELPGW------------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFC-K--TEEELHLALERLGRV 367 (381)
T ss_dssp CSBSSEEEEECTTC------------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECC-S--CHHHHHHHHHHHHHH
T ss_pred CCcceEEEEecChH------------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeC-C--CHHHHHHHHHHHHHH
Confidence 44344555655331 1 4455566786544433332 3468999996 3 899999999999988
Q ss_pred HHHHh
Q 010842 490 ADRLF 494 (499)
Q Consensus 490 ~~~l~ 494 (499)
.++..
T Consensus 368 l~~~r 372 (381)
T 1v2d_A 368 VNSPR 372 (381)
T ss_dssp C----
T ss_pred Hhhcc
Confidence 76543
No 89
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=9e-23 Score=208.80 Aligned_cols=337 Identities=10% Similarity=0.060 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCC---CccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842 103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLP---KTFMFSGTGGGVIQNTTSDSILVTLIAARDR 176 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~ 176 (499)
+..+.+.+...+..+ ...|...++..++++++.+|+.+.+|.+ .+ ..++|+|||+|+..++.+..+
T Consensus 60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~-------~v~~t~G~~~al~~~~~~l~~- 131 (425)
T 1vp4_A 60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDED-------NLIFTVGSQQALDLIGKLFLD- 131 (425)
T ss_dssp HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGG-------GEEEEEHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcc-------cEEEeccHHHHHHHHHHHhCC-
Confidence 445555555555432 2345555567899999999998887853 33 468999999998888776532
Q ss_pred HHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--CCccEEE-EEe
Q 010842 177 ALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--GLVPLFL-CAT 253 (499)
Q Consensus 177 ~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g~~p~~v-v~t 253 (499)
++..|+++..+|.++..+++..|. +++.+|++++ .+|+++|++++++..++ +..+.+| +.+
T Consensus 132 ----------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~ 195 (425)
T 1vp4_A 132 ----------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVS 195 (425)
T ss_dssp ----------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEEC
T ss_pred ----------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECC
Confidence 456788899999999999999999 9999998753 39999999999863221 1234455 577
Q ss_pred cCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh-cCCCCCceeEecccccccCCCcceEEEEeC
Q 010842 254 VGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQ 329 (499)
Q Consensus 254 ~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~ 329 (499)
.++|+||.+-| +++|+++|++||+++++|++|+.+........... .+....+.++.+.+|+++....+|++++++
T Consensus 196 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 275 (425)
T 1vp4_A 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK 275 (425)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH
Confidence 89999999965 67899999999999999999987643211111110 011235677889999998334579988864
Q ss_pred chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
+.. +.+....... +. ....+..+++...+. .+.+++..++..++++++.+.|++
T Consensus 276 -~~~-~~l~~~~~~~----------------~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 333 (425)
T 1vp4_A 276 -EFI-RKIVQAKQSA----------------DL----CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE 333 (425)
T ss_dssp -HHH-HHHHHHHHHH----------------HS----SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHH-HHHHHHhhhh----------------cC----CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 2221100000 00 012344444444442 345667777778889999999987
Q ss_pred C-C---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHH
Q 010842 406 D-P---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDER 477 (499)
Q Consensus 406 ~-~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~ 477 (499)
. | ++++..+...+.+++++.... + ..++.+.|.++|+.+..+..+. +..++|+++.. .+++
T Consensus 334 ~~~~~~g~~~~~~~~g~~~~~~~~~~~--~-------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~e 402 (425)
T 1vp4_A 334 YFSDIPGVKWVKSEGGLFIWLTLPEGF--D-------TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL--PPDE 402 (425)
T ss_dssp HSTTSTTCEECCCSBSSEEEEECCTTC--C-------TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS--SCHH
T ss_pred hCCCCCceEEecCCccEEEEEEcCCCC--C-------HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC--CCHH
Confidence 3 5 688765544556777764310 0 2346667777786544433331 35689999963 3899
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 010842 478 HVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 478 di~~l~~~l~~~~~~l~~~ 496 (499)
++++++++|.++.+++.++
T Consensus 403 ~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 403 KIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999998876544
No 90
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.91 E-value=1.6e-23 Score=212.65 Aligned_cols=324 Identities=18% Similarity=0.146 Sum_probs=213.0
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+..+ .|..++...+++++ +++++|.+. .+++++||+|+..++.+++-.
T Consensus 45 ~v~~a~~~~~~~~--~y~~~~~~~~l~~~----la~~~~~~~---------~v~~~~Gt~a~~~~l~~~~~~-------- 101 (399)
T 2oga_A 45 ETDAAIARVLDSG--RYLLGPELEGFEAE----FAAYCETDH---------AVGVNSGMDALQLALRGLGIG-------- 101 (399)
T ss_dssp HHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHTTSSE---------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHhcC--CCCCchhHHHHHHH----HHHHHCCCe---------EEEecCHHHHHHHHHHHhCCC--------
Confidence 3444455444332 34445666666665 788888763 388999999998888776211
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|+++ +.+|+ +++++|.+.|
T Consensus 102 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~ 166 (399)
T 2oga_A 102 --PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPAD 166 (399)
T ss_dssp --TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCC
T ss_pred --CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccC
Confidence 456788899999999999999999 9999998753 4789999999998653 23444 4678999999
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPE 342 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~ 342 (499)
+++|.++|+++|+++++|++|+.+..... .. . + ...|.++++.| |+++.|..+|+++.++++......... .
T Consensus 167 l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~-~-~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~-~ 240 (399)
T 2oga_A 167 MDALRELADRHGLHIVEDAAQAHGARYRG--RR-I-G-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLR-N 240 (399)
T ss_dssp HHHHHHHHHHHTCEECEECTTCTTCEETT--EE-T-T-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHH-B
T ss_pred HHHHHHHHHHcCCEEEEECcccccCccCC--ee-c-c-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHH-h
Confidence 99999999999999999999976533211 11 1 1 12588888885 999865456777776554332211100 0
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc-eE--
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF-AL-- 419 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-~~-- 419 (499)
+ ... ..+.......+.+...+..++++..+ +.++++.++..++++++.+.|+++|++++...+.. +.
T Consensus 241 ~--g~~------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 310 (399)
T 2oga_A 241 Y--GSR------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVW 310 (399)
T ss_dssp T--TCS------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCC
T ss_pred c--Ccc------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccee
Confidence 0 000 00100011122244556666665544 55667788888999999999999888876543322 21
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--EC--------C-------------EEEEEEeccCCCCcH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--VG--------G-------------LYMLRFAVGASLTDE 476 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~--------g-------------~~~lRi~~~~~~~t~ 476 (499)
+.|.+.... ..++.+.|.++|+.+..... .. + ..++|+++ ++.+|+
T Consensus 311 ~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~-~~~~t~ 379 (399)
T 2oga_A 311 HLFTVRTER----------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPI-GPHLER 379 (399)
T ss_dssp SSEEEECSS----------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECC-STTCCH
T ss_pred EEEEEECCC----------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccC-CCCCCH
Confidence 123332211 35677778888864422110 00 0 25799998 488999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEGADRL 493 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~l 493 (499)
+|+++++++|+++.+++
T Consensus 380 edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 380 PQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987764
No 91
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=1.1e-24 Score=224.24 Aligned_cols=291 Identities=13% Similarity=0.060 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+++++ +|.+.. .++|+|+|+||..++.++.. ++..|+++..+|.++.+++...
T Consensus 57 ~~~~~~~~~la~-~g~~~~--------v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~ 116 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDYDG--------YFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDIS 116 (446)
T ss_dssp SHHHHHHHHHCS-CTTEEE--------EEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHh-cCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHc
Confidence 344566777999 998743 48899999999998887632 5667999999999999999999
Q ss_pred CCCCCCeEEeeC--CCCCC--CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 209 GVSPANIRALPT--SVDAN--FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 209 G~g~~~v~~v~~--~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
|+ .++.++. +++.. +.+|+++| +.++ +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+|
T Consensus 117 G~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea 183 (446)
T 2x3l_A 117 QQ---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEA 183 (446)
T ss_dssp TC---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECT
T ss_pred CC---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcch
Confidence 99 9999998 53200 47898887 3322 33677777 56699999999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
|++...+.+...... .. .+|+++.++||+++++.++|+++++++..-...+.....+ .+.
T Consensus 184 ~~~~~~f~~~~~~~~-~~-g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~------------------~~~ 243 (446)
T 2x3l_A 184 HGAHFGLQGFPDSTL-NY-QADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSY------------------FQT 243 (446)
T ss_dssp TCTTTTSTTSCCCGG-GG-TCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHH------------------HSC
T ss_pred hhhhhccCCCCCChH-Hc-CCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHH------------------HcC
Confidence 987332222100111 11 3799999999999988899999998753100111100000 011
Q ss_pred CCCC-C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 365 GRRF-K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 365 sr~~-~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
+.+. . ...+..+++.+...+.+++.++..++++++++. +++++.+.....+++.+.+.. ..++
T Consensus 244 ~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~----------~~~l 308 (446)
T 2x3l_A 244 SSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT----------GHDI 308 (446)
T ss_dssp SSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC----------HHHH
T ss_pred CCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC----------HHHH
Confidence 1111 1 123444555554445555778888888888777 677775433335666664322 3567
Q ss_pred HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.|.++|+.+ .. .+..++|++++ ..+|++|+ +++++|+++.+++
T Consensus 309 ~~~L~~~GI~v-~~---~g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 309 QNWFMNAHIYL-EL---ADDYQALAILP-LWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp HHHHHHTTEEE-SE---ECSSCEEEECC-CCCTTCCC-CHHHHHHHHHTCC
T ss_pred HHHHHHCCCEE-Ee---cCCCEEEEEee-cCCCHHHH-HHHHHHHHHHHhh
Confidence 77787787443 21 13357999995 77899999 9999999987644
No 92
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=1e-22 Score=207.56 Aligned_cols=341 Identities=15% Similarity=0.077 Sum_probs=222.8
Q ss_pred HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHc------CCCCccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842 104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATML------KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDR 176 (499)
Q Consensus 104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~------g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~ 176 (499)
..+.+.+...+... ...|...++..++++++.+|+.+.+ |.+... ...++|+|||+|+..++.+..+
T Consensus 53 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~-----~~v~~~~g~~~al~~~~~~l~~- 126 (416)
T 1bw0_A 53 AAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVK-----DNVVLCSGGSHGILMAITAICD- 126 (416)
T ss_dssp HHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG-----GGEEEESHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCc-----ceEEEeCChHHHHHHHHHHhCC-
Confidence 34444455444322 2345444567889999888887432 322110 2469999999999888877632
Q ss_pred HHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC
Q 010842 177 ALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT 256 (499)
Q Consensus 177 ~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt 256 (499)
++..|+++..+|.++..+++..|+ +++.+|++++++|.+|+++|+++++++ +.+|+++.++
T Consensus 127 ----------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~ 187 (416)
T 1bw0_A 127 ----------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPS 187 (416)
T ss_dssp ----------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSC
T ss_pred ----------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCC
Confidence 456788899999999999999999 999999875434789999999988643 3467788899
Q ss_pred CcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCc----cchhhhcCCCC--CceeEecccccccCC-CcceEEE
Q 010842 257 TSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP----EFRHYLNGIER--VDSFSFSPHKWLLSY-LDCCCLW 326 (499)
Q Consensus 257 t~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~----~~~~~~~g~~~--aDsi~~~~hK~l~~p-~~~g~l~ 326 (499)
|++|.+.| +++|+++|++||+++++|++|+.+.+... .... +..+.. .+.++.+.+|+++.| ..+|+++
T Consensus 188 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~ 266 (416)
T 1bw0_A 188 NPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWLL 266 (416)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEEE
T ss_pred CCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEEE
Confidence 99999988 99999999999999999999987532211 1111 122211 235677899998765 4589998
Q ss_pred EeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842 327 VKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGF 402 (499)
Q Consensus 327 ~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~ 402 (499)
++++ ..+.........+. . ...+ ...+...+ ++...+.+++++..++..++++++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~-~---------------~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (416)
T 1bw0_A 267 YVDPHGNGPSFLEGLKRVG-M---------------LVCG--PCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNH 328 (416)
T ss_dssp EECTTCSCHHHHHHHHHHH-H---------------HHTC--SCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCchhhHHHHHHHHHHHh-c---------------cccC--CCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 8775 21111100000000 0 0000 11233333 333334677888999999999999999
Q ss_pred HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842 403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~ 481 (499)
|+++|+++++.+...+.+.+++......... ...++.++|. ++|+.+..+..+....++|++++ +++++|++
T Consensus 329 L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~ 401 (416)
T 1bw0_A 329 IGECIGLAPTMPRGAMYLMSRIDLEKYRDIK----TDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYRE 401 (416)
T ss_dssp HTTSTTEEECCCCBTTEEEEEECGGGBSSCC----SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHH
T ss_pred HHhCCCCcccCCCeeEEEEEeCCHHHcCCCC----CHHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHH
Confidence 9998899876544455566666421000000 1345666664 66865544444443468999994 67899999
Q ss_pred HHHHHHHHHHHHhc
Q 010842 482 AWELIMEGADRLFK 495 (499)
Q Consensus 482 l~~~l~~~~~~l~~ 495 (499)
+++.|.++.++..+
T Consensus 402 ~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 402 AVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998876543
No 93
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.91 E-value=3.3e-22 Score=199.98 Aligned_cols=308 Identities=12% Similarity=0.100 Sum_probs=212.2
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+.. ...| ..+...+++ +++++++|.+.+ ..++|+|||+|+..++.+...
T Consensus 48 ~~v~~a~~~~~~~-~~~y-~~~~~~~lr----~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~-------- 106 (363)
T 3ffh_A 48 KKVAAIQANSSVE-TEIY-PDGWASSLR----KEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD-------- 106 (363)
T ss_dssp HHHHHHHHTCBSC-CCBC-----CHHHH----HHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS--------
T ss_pred HHHHHHHHHHHHH-hhcC-CCcchHHHH----HHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc--------
Confidence 3444555554432 2222 233444444 458888887654 469999999999888876532
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++...++..|. +++.+|.+++ +.+|+++|+++++++ +.+|+++.++|++|.+.
T Consensus 107 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~ 172 (363)
T 3ffh_A 107 ---TTTNTVMATPTFVQYRQNALIEGA---EVREIPLLQD--GEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYI 172 (363)
T ss_dssp ---TTCEEEEEESSCHHHHHHHHHHTC---EEEEEECCTT--SCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCCC--CCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCc
Confidence 456788888999999999999999 9999999863 699999999998653 44788899999999999
Q ss_pred ChhHHHHHHHHh--CCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 264 NVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 264 ~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
|+++|.++|+.+ |+++|+|++|+.+.. +...... ......+.+..+.+|+++.| ..+|+++++ ++.. +.+.
T Consensus 173 ~~~~l~~l~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l~ 248 (363)
T 3ffh_A 173 ELADIQAFLDRVPSDVLVVLDEAYIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KEII-RQLN 248 (363)
T ss_dssp CHHHHHHHHTTSCTTSEEEEECTTGGGCS--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HHHH-HHHH
T ss_pred CHHHHHHHHHhCCCCcEEEEeCchHhhcC--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HHHH-HHHH
Confidence 999999999888 999999999987643 1111111 11122346677889999743 456888884 3332 2221
Q ss_pred C-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 339 T-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 339 ~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
. ...| ....+..+++...+ ..+++++..++..++++++.+.|++++++++. ++.
T Consensus 249 ~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~ 304 (363)
T 3ffh_A 249 IVRPPF-----------------------NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PAN 304 (363)
T ss_dssp HTCCSC-----------------------CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCC
T ss_pred HhCCCC-----------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCC
Confidence 1 1000 11234444444444 23667888889999999999999997799876 455
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+.+++.+.. . ..++.+.|.++|+.+..+..+....++|++++ +++|+++++++|+++
T Consensus 305 ~~~~~~~~~~-~----------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 305 GNFVLIDLGI-E----------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp SSEEEEECSS-C----------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred CeEEEEECCC-C----------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence 5667776643 1 45677788888855444333333568999984 899999999999875
No 94
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.91 E-value=5.5e-23 Score=210.58 Aligned_cols=339 Identities=12% Similarity=0.076 Sum_probs=223.0
Q ss_pred HHHHHHHHHHccc---CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 104 GFLGEMLCACFNS---VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 104 ~~~~~~l~~~~n~---~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
..+.+.+...++. ....|...++..++++++.+|+.+.+|.+... . ..++|+|||+|+..++.+...
T Consensus 53 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~---- 123 (429)
T 1yiz_A 53 KYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP-----MTEVLVTVGAYEALYATIQGHVD---- 123 (429)
T ss_dssp HHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT-----TTSEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cCCEEEecChHHHHHHHHHHhcC----
Confidence 3455666665543 22345545567899999999999988864211 1 368999999999988887632
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC--------CCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA--------NFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
++..|+++..+|.++..+++..|. +++.+|.+.+. +|.+|+++|+++++++ +.+|+
T Consensus 124 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~ 187 (429)
T 1yiz_A 124 -------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMII 187 (429)
T ss_dssp -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEE
T ss_pred -------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEE
Confidence 456788888999999999999999 99999987642 4689999999988532 45777
Q ss_pred EecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEE
Q 010842 252 ATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCL 325 (499)
Q Consensus 252 ~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l 325 (499)
++.++|++|.+-| +++|+++|++||+++++|++|+++.+........ +.+....|.++.++||+++.| ..+|++
T Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~ 267 (429)
T 1yiz_A 188 INTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWA 267 (429)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred ECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEE
Confidence 7899999999974 9999999999999999999998764322111111 111234788999999998744 348998
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh----c--HHHHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY----G--VLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g--~~g~~~~~~~~~~~a~~l 399 (499)
+++++ .. +.+.....+.. + .........+..++... + .+.+++..++..++++++
T Consensus 268 ~~~~~-~~-~~l~~~~~~~~--------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (429)
T 1yiz_A 268 YGPEA-LL-KNLQMVHQNCV--------------Y---TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYM 328 (429)
T ss_dssp ESCHH-HH-HHHHHHHHTTT--------------C---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHH
T ss_pred EeCHH-HH-HHHHHHHhhcc--------------c---CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHH
Confidence 88643 22 22211100000 0 00000111223333331 3 455778888888999999
Q ss_pred HHHHhcCCCeEEEcCCCceEEEEEecCCCCC---CcchhHHHHHHHHHHHH-hcCCEEEEeeeEC-------CEEEEEEe
Q 010842 400 EGFVKSDPRFEIVVPRHFALVCFRLNPYPHS---GSADTEMLNRKLLDWVN-STGRVYLTHTIVG-------GLYMLRFA 468 (499)
Q Consensus 400 ~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~~lRi~ 468 (499)
.+.|++. ++++..+.....+++++...... ..........++.++|. ++|+.+..+..+. +..++|++
T Consensus 329 ~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis 407 (429)
T 1yiz_A 329 ASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYC 407 (429)
T ss_dssp HHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEE
T ss_pred HHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEE
Confidence 9999887 78876554445677776532000 00000011356677776 5675443332332 24689999
Q ss_pred ccCCCCcHHHHHHHHHHHHHHH
Q 010842 469 VGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 469 ~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+. +++++|++++++|.++.
T Consensus 408 ~~---~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 408 FF---KKDENLQKAAEILRKWK 426 (429)
T ss_dssp CC---SCHHHHHHHHHHHHHHS
T ss_pred ec---CCHHHHHHHHHHHHHhc
Confidence 96 48999999999998764
No 95
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=8.7e-23 Score=204.54 Aligned_cols=284 Identities=14% Similarity=0.100 Sum_probs=201.2
Q ss_pred HHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 134 VMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 134 ~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
+.+++++++|. +.+ ..++|+|||+|+..++.+... ++..|+++..+|.++..+++..|.
T Consensus 72 l~~~la~~~g~~~~~-------~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 131 (367)
T 3euc_A 72 LRAKLKEVMQVPAGM-------EVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL-- 131 (367)
T ss_dssp HHHHHHHHHTCCTTC-------EEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC--
T ss_pred HHHHHHHHhCCCCcc-------eEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 44458888898 332 468999999999888776532 456788899999999999999999
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHh--CCEEEeeccccc
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEY--GIWVHVDAAYAG 287 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~--~~~lhvD~A~g~ 287 (499)
+++.+|+++ ++.+|+++|++++++. .+.+|+++.++|++|.+ +++++|+++|++| |+++++|++|+.
T Consensus 132 -~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~ 203 (367)
T 3euc_A 132 -EFVGVPLRA--DFTLDRGAMLAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP 203 (367)
T ss_dssp -EEEEEECCT--TSCCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC
T ss_pred -eEEEecCCC--CCCCCHHHHHHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh
Confidence 999999986 4699999999999872 12377788999999999 5678888889999 999999999987
Q ss_pred hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
+.. ........ ....+.++.+.+|++.....+|+++.++ ... +.+.. ...|
T Consensus 204 ~~~--~~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~~-~~~-~~~~~~~~~~----------------------- 255 (367)
T 3euc_A 204 FAQ--ESWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAGDP-QWL-EQLDKVRPPY----------------------- 255 (367)
T ss_dssp SSS--CCSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEECH-HHH-HHHGGGCCSS-----------------------
T ss_pred hcc--cchHHHHh-hCCCEEEEecchhhcccccCceeeeeCH-HHH-HHHHHhCCCC-----------------------
Confidence 532 11111111 1234577889999944445678888743 322 22211 1100
Q ss_pred CCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW 445 (499)
Q Consensus 367 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~ 445 (499)
....+..+++...+. .+.+++..++..++++++.+.|+++|++++. ++..+.+.+.+. . ..++.+.
T Consensus 256 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~--~----------~~~l~~~ 322 (367)
T 3euc_A 256 NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP--D----------AAQTFDR 322 (367)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--C----------HHHHHHH
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--C----------HHHHHHH
Confidence 012344444444432 4567888899999999999999999999854 555566666664 2 4567777
Q ss_pred HHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 446 VNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 446 l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
|.++|+.+..+..+. +..++|++++ +++|+++++++|+++.
T Consensus 323 l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 323 LLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp HHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 888886544333321 2468999984 8999999999998864
No 96
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=7.1e-23 Score=205.46 Aligned_cols=316 Identities=12% Similarity=0.048 Sum_probs=216.1
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+......|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+..+
T Consensus 45 ~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------- 111 (370)
T 2z61_A 45 KPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID-------- 111 (370)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC--------
Confidence 445555555554333455555567899999999999888864321 2469999999999988887632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++..+++..|. +++.+| +|+++|++++++ .+.+|+++.++|++|.+.
T Consensus 112 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~ 171 (370)
T 2z61_A 112 ---DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSD------KTKAIIINSPSNPLGEVI 171 (370)
T ss_dssp ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCS------SEEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhccc------CceEEEEcCCCCCcCccc
Confidence 456788899999999999999999 888887 589999988854 244677889999999999
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
|++ |.++|++||+++++|++|+.+.... ..... +.+....|.++.+.||+++.| ..+|+++.+++ +.+.+...
T Consensus 172 ~~~-l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~ 247 (370)
T 2z61_A 172 DRE-IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE--IIEAILKL 247 (370)
T ss_dssp CHH-HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHH--HHHHHHHH
T ss_pred CHH-HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHH--HHHHHHHH
Confidence 999 9999999999999999998764321 11111 112235788999999999744 34888887763 22222110
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 417 (499)
..... .....+..+++...+ +.+.+++..++..++++++.+.|++. ++++..+...
T Consensus 248 ~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 306 (370)
T 2z61_A 248 QQNLF--------------------ISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGA 306 (370)
T ss_dssp HHHHT--------------------SSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBT
T ss_pred Hhhcc--------------------cCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcc
Confidence 00000 001234444444444 45667788888899999999999987 7776543322
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+.+.+.. . ..++.++|. +.|+.+..+..+. +..++|++++ +++++|+++++.|.++.+
T Consensus 307 ~~~~~~~~~-~----------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 307 YYVFPNIGE-D----------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp TEECCBCSS-C----------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHHHHHC
T ss_pred eEEEEecCC-C----------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHHHHHh
Confidence 233334432 1 355677776 5685544433332 3568999995 688999999999988753
No 97
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=3.5e-22 Score=199.01 Aligned_cols=292 Identities=11% Similarity=0.051 Sum_probs=206.3
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS 211 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g 211 (499)
.++++++++++|.+.+ ..++|+|||+|+..++.+..+ ++..|+++..+|.++...++..|.
T Consensus 54 ~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~- 114 (354)
T 3ly1_A 54 LMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS-----------LEAQLVIPELTYGDGEHFAKIAGM- 114 (354)
T ss_dssp HHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-----------CCCeEEECCCCchHHHHHHHHcCC-
Confidence 4556668999998654 468999999999888876532 456788899999999999999999
Q ss_pred CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchh
Q 010842 212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSA 289 (499)
Q Consensus 212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~ 289 (499)
+++.+|.+++ +.+|+++|++++++. ..+.+|+++.++|++|.+-|++++.++++. +|+++++|++|+.+.
T Consensus 115 --~~~~~~~~~~--~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~ 186 (354)
T 3ly1_A 115 --KVTKVKMLDN--WAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFV 186 (354)
T ss_dssp --EEEEECCCTT--SCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGC
T ss_pred --EEEEecCCCC--CCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhc
Confidence 9999998753 699999999999731 124578888999999999999998888887 999999999998764
Q ss_pred ccCc--cchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 290 CICP--EFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 290 ~~~~--~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
.... ............+.++.++||+++ .+..+|+++.++ ... +.+...... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~~~~~~~~-~--------------------- 242 (354)
T 3ly1_A 187 NDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP-TVI-ALMGRYVAG-E--------------------- 242 (354)
T ss_dssp CCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH-HHH-HHHGGGTTC-S---------------------
T ss_pred cccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH-HHH-HHHHHhcCC-C---------------------
Confidence 3211 111112222135588889999997 446688888743 322 332221110 0
Q ss_pred CCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW 445 (499)
Q Consensus 367 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~ 445 (499)
....+..+++...+. .+.++++.++..++++++.+.|++. ++++. ++..+.+++.+.. . ..++.+.
T Consensus 243 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~-~----------~~~~~~~ 309 (354)
T 3ly1_A 243 KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLVV-P----------LKDYQTH 309 (354)
T ss_dssp CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECSS-C----------HHHHHHH
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECCC-C----------HHHHHHH
Confidence 112344444444442 3567888888999999999999887 77765 4555666666643 1 4567777
Q ss_pred HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 446 VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 446 l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
|.++|+. +.+....+..++|++++ +++|+++++++|+++.++
T Consensus 310 l~~~gi~-v~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 310 MADAGVL-IGRAFPPADNWCRISLG----TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp HHHTTEE-CCCCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred HHHCCEE-EeecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHh
Confidence 7778854 33222234578999984 789999999999987653
No 98
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=1.1e-21 Score=196.81 Aligned_cols=293 Identities=14% Similarity=0.046 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
..++++++.+|+.+.+|++... ...++|+|+++|+..++.+..+ ++..|+++..+|.++..+++
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~ 134 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYSMHPILAK 134 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHH
Confidence 3689999999999887764211 1468899999988777776532 45678889999999999999
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
..|. +++.+|.+. +|.+|+++|++++++. .+.+|+++.++|++|.+.|++++.++|+.+++++++|++|+
T Consensus 135 ~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~ 204 (369)
T 3cq5_A 135 GTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYA 204 (369)
T ss_dssp HTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTG
T ss_pred HcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCch
Confidence 9999 999999764 4689999999999762 13367778999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
.+... +............+.++.+.||+++.| ..+|+++++++ .. +.+...... + +
T Consensus 205 ~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~l~~~~~~----------------~----~ 261 (369)
T 3cq5_A 205 EFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FI-DAVMLVRLP----------------Y----H 261 (369)
T ss_dssp GGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HH-HHHHTTSCT----------------T----C
T ss_pred hhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HH-HHHHHcCCC----------------C----C
Confidence 76532 111111122111457889999999744 45799888653 22 333221110 0 0
Q ss_pred CCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 366 RRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 366 r~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
...+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+++++.+. .. ..++.+
T Consensus 262 --~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~----------~~~l~~ 326 (369)
T 3cq5_A 262 --LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDF-SD----------QHAAWQ 326 (369)
T ss_dssp --SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECC-SS----------HHHHHH
T ss_pred --CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECC-CC----------HHHHHH
Confidence 12344444444442 3457778888889999999999884 78876 555567777664 11 345677
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+|.++|+.+ .+. ....++|+++. +++|+++++++|+++.
T Consensus 327 ~l~~~gi~v-~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 327 AFLDRGVLI-RDV--GIAGHLRTTIG----VPEENDAFLDAAAEII 365 (369)
T ss_dssp HHHHTTEEC-BCC--SCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEE-EEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHH
Confidence 777778543 333 22467999984 7899999999998875
No 99
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.90 E-value=4e-23 Score=209.56 Aligned_cols=341 Identities=14% Similarity=0.019 Sum_probs=213.7
Q ss_pred ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHH
Q 010842 90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILV 168 (499)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~ 168 (499)
|..+.+.+++..+|..+.+.+....+........+|....+.+++++++++++|.+... ..++ |+|||+|+..
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~ 112 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDA 112 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHH
Confidence 33444555555555444444443211111111235666677888999999999997421 3577 9999999998
Q ss_pred HHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842 169 TLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLA--GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 169 al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 245 (499)
++.+..+ ++ +++++...|.. +...+... |. .++.||++ ++ +..+.+ +. .
T Consensus 113 ~~~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-~g-~~~~~~-----i~------~ 164 (398)
T 2fyf_A 113 AAFGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSD-PG-SAPEPQ-----TD------P 164 (398)
T ss_dssp HHHHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECC-TT-CCCCCC-----CC------T
T ss_pred HHHHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecC-CC-CCCCcc-----cc------C
Confidence 8877631 33 23334444532 23345666 56 88899987 33 333321 22 2
Q ss_pred ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL 325 (499)
Q Consensus 246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 325 (499)
++.+|++++++|+||.+.|+++|.++ +|+|+|+|++|+.+....+ +..+|++++++||+++.|.++|++
T Consensus 165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l 233 (398)
T 2fyf_A 165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA 233 (398)
T ss_dssp TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence 34578888999999999999999887 8999999999986643221 123899999999999988678888
Q ss_pred EEeCchhHHHhh------cCCccCCCCCCCCCCCcccC--CCcccCCCCCC-CcHHHHHHHHHhcHHH-HHHHHHHHHHH
Q 010842 326 WVKQPGLLVKAL------STDPEYLKNKPSESNSVVDF--KDWQVGTGRRF-KSLRLWMVLRSYGVLN-LQSHIRSDIRL 395 (499)
Q Consensus 326 ~~r~~~~l~~~~------~~~~~yl~~~~~~~~~~~~~--~~~~~~~sr~~-~al~~~~~l~~~g~~g-~~~~~~~~~~~ 395 (499)
+++++. +.... ...+.|+..... ... ..... .+... ....+..+++.+...| ++++.++..++
T Consensus 234 ~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 306 (398)
T 2fyf_A 234 IMSPAA-LSRIEAIAATGRWVPDFLSLPIA-----VENSLKNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADS 306 (398)
T ss_dssp EECHHH-HHHHHHHHHTTCCCCGGGCHHHH-----HHHHTTTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred EECHHH-HHHhhcccccCCCCCcEEehHHH-----hhhcccCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 887642 22111 001223221100 000 00000 11111 1224455666555555 88999999999
Q ss_pred HHHHHHHHhcCCCeEEEc-CC--Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842 396 AKMFEGFVKSDPRFEIVV-PR--HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA 471 (499)
Q Consensus 396 a~~l~~~L~~~~~~~~~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~ 471 (499)
++++.+.|+++|+++++. +| ..+ +++|++.... ...++.++|.++|+.+..+....+..++|+++.
T Consensus 307 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~- 376 (398)
T 2fyf_A 307 SQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV---------DAGTVAKILRANGIVDTEPYRKLGRNQLRVAMF- 376 (398)
T ss_dssp HHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS---------CHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC-
T ss_pred HHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC---------CHHHHHHHHHHCCcEEecCcccCCCCEEEEEec-
Confidence 999999999998999874 23 345 7888874310 145677888888865433211123467999996
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 010842 472 SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~ 492 (499)
..+|++|+++++++|+++.++
T Consensus 377 ~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 377 PAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp TTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 678999999999999988654
No 100
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=2.8e-22 Score=200.70 Aligned_cols=309 Identities=12% Similarity=0.067 Sum_probs=212.1
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+.. ...|.... ..++++ .+++++|.+.+ ..++|+|||+|+..++.+..+
T Consensus 46 ~~v~~a~~~~~~~-~~~y~~~~-~~~lr~----~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-------- 104 (365)
T 3get_A 46 PKAIECLRQNANK-AHLYPDDS-MIELKS----TLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN-------- 104 (365)
T ss_dssp HHHHHHHHHHGGG-TTSCCCTT-CHHHHH----HHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHh-hccCCCCC-hHHHHH----HHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC--------
Confidence 3444555555542 23333222 244444 48888887654 469999999999888776532
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++...++..|. +++.+|++. .++ +|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 105 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~-~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 170 (365)
T 3get_A 105 ---SKNAFLQAGVTFAMYEIYAKQCGA---KCYKTQSIT-HNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECL 170 (365)
T ss_dssp ---TTCEEEECSSCCTHHHHHHHHHTC---EEEECSSSS-CCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecCC-CCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCc
Confidence 466788999999999999999999 999999832 357 9999999998643 44788889999999999
Q ss_pred ChhHHHHHHH--HhCCEEEeeccccchhc--cCcc---chhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHH
Q 010842 264 NVEPLAEVAN--EYGIWVHVDAAYAGSAC--ICPE---FRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVK 335 (499)
Q Consensus 264 ~l~~I~~ia~--~~~~~lhvD~A~g~~~~--~~~~---~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~ 335 (499)
|++++.++++ ++|+++++|++|+.+.+ .... ..... +....+.++.+.||+++. +..+|+++. +++.. +
T Consensus 171 ~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~-~ 247 (365)
T 3get_A 171 DASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI-KEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANII-S 247 (365)
T ss_dssp CHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH-HHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHH-H
T ss_pred CHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh-ccCCCEEEEeecchHhcCcchheEEEEc-CHHHH-H
Confidence 9999999888 67999999999986652 1111 11111 111356788899999974 456888887 43332 2
Q ss_pred hhcC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 336 ALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 336 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
.+.. ...| ....+..+++...+ ..+++++..++..++++++.+.|++. ++++.
T Consensus 248 ~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~- 302 (365)
T 3get_A 248 AFYKLRAPF-----------------------NVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII- 302 (365)
T ss_dssp HHHHHSCTT-----------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-
T ss_pred HHHHhcCCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-
Confidence 2211 1100 01234444444443 23668888899999999999999998 88875
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
++..+.+.+.+.... ..++.+.|.++|+.+..+..+. ..++|++++ +++|+++++++|+++.
T Consensus 303 ~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 303 DSYTNFITYFFDEKN----------STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CCSSSEEEEECSSSC----------HHHHHHHHHTTTEECEECGGGT-CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCC----------HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 455566666664311 4567788888885544433333 678999984 7899999999998864
No 101
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.90 E-value=1.2e-22 Score=204.04 Aligned_cols=323 Identities=11% Similarity=0.018 Sum_probs=216.7
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+......|.. .. .++++++.+++.+.+|.+... ...++|+|||+|+..++.+..+
T Consensus 40 ~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~--------- 103 (377)
T 3fdb_A 40 AVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP--------- 103 (377)
T ss_dssp HHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC---------
Confidence 3445555555433344544 34 789999999999888864321 2469999999999888876532
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++..+|.++..+++..|. +++.+|++.+ +|+++|++++++++ .+|+++.++|++|.+-|
T Consensus 104 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 104 --AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATGG----INLHDVEKGFQAGA------RSILLCNPYNPLGMVFA 168 (377)
T ss_dssp --TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTTS----CCHHHHHHHHHTTC------CEEEEESSBTTTTBCCC
T ss_pred --CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCCC----CCHHHHHHHhccCC------CEEEEeCCCCCCCCCCC
Confidence 456688888999999999999999 9999998753 99999999997643 37888899999999964
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccC-ccchhhhcCC--CCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHYLNGI--ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~~~g~--~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
+++|+++|++||+++++|++|+.+.... ...... ..+ ...+.+..+.+|+++.| ..+|++++.++... +.+
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~-~~~ 246 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAG-VSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDA-EHW 246 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGG-SCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccH-HHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHH-HHH
Confidence 6777788999999999999998754322 111111 111 11346788999999644 56787777665433 222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP 414 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~ 414 (499)
.....+.. .....+..+++...+ +.+.++++.++..++++++.+.|++ +|++++..+
T Consensus 247 ~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (377)
T 3fdb_A 247 QQLSPVIK--------------------DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM 306 (377)
T ss_dssp HHSCHHHH--------------------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC
T ss_pred HHHHHhhc--------------------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence 11111100 011233344433333 3466788889999999999999988 889988744
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.....+++.+..... ..++.+.+.++ |+.+..+..+. +..++|++++ +++++|++++++|.++.+
T Consensus 307 ~~~~~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 307 QATYLMWIDFRDTTI---------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA---TSREVLEEAIDRMAKAVS 374 (377)
T ss_dssp SBCSEEEEECTTSCC---------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred CeeEEEEEECcccCC---------CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHh
Confidence 433333455544210 12345555554 75444333332 2478999986 489999999999998765
Q ss_pred H
Q 010842 492 R 492 (499)
Q Consensus 492 ~ 492 (499)
+
T Consensus 375 ~ 375 (377)
T 3fdb_A 375 H 375 (377)
T ss_dssp T
T ss_pred h
Confidence 4
No 102
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.90 E-value=7.4e-22 Score=197.15 Aligned_cols=291 Identities=12% Similarity=0.027 Sum_probs=204.5
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV 204 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka 204 (499)
+...++++. +++++|.+.+ ..++|+|||+|+..++.++ ..|+++..+|.++..+
T Consensus 61 ~~~~~l~~~----la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~ 114 (361)
T 3ftb_A 61 VNYRRLNKS----IENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEIN 114 (361)
T ss_dssp TTCHHHHHH----HHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHH
T ss_pred ccHHHHHHH----HHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHH
Confidence 444555554 7777887654 3689999999998887755 2488888999999999
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEe
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHV 281 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhv 281 (499)
++..|. +++.+|+++++ .+++++|++++++ + .+|+++.++|++|.+-| +++|+++|++||+++++
T Consensus 115 ~~~~g~---~~~~~~~~~~~--~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 115 AKKHGV---SVVFSYLDENM--CIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp HHHTTC---EEEEEECCTTS--CCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCC---eEEEeecCccc--CCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence 999999 99999998765 6788999998865 3 37888999999999965 67788888899999999
Q ss_pred eccccchhccCccchh-hhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 282 DAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|++|+.+... ..... ...+......++.+.+|+++.| ..+|++++.++... +.+.......
T Consensus 183 De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~-~~~~~~~~~~--------------- 245 (361)
T 3ftb_A 183 DEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIA-AKIKAKQNPW--------------- 245 (361)
T ss_dssp ECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHH-HHHHTTSCTT---------------
T ss_pred ECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHH-HHHHhhCCCC---------------
Confidence 9999876542 11110 0111112346677999999744 56788875665543 2222111000
Q ss_pred cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEEEEEecCCCCCCcchhHH
Q 010842 360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
....+..+++...+. .+++++..++..++++++.+.|+++|+++ +. ++..+.+.+++....
T Consensus 246 -------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~--------- 308 (361)
T 3ftb_A 246 -------NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS--------- 308 (361)
T ss_dssp -------CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC---------
T ss_pred -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC---------
Confidence 112344444444442 46678888899999999999999999998 65 555667777775422
Q ss_pred HHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
..++.+.|.++|+.+..+..+. +..++|++++ +.+++++++++|+++.+.
T Consensus 309 -~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 309 -GEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp -HHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhc
Confidence 4567888888885544433332 2468999984 788999999999887653
No 103
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=5e-22 Score=202.16 Aligned_cols=290 Identities=12% Similarity=0.098 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+++++++|.+.. +++++||+||..++.+..+ ++..|+++...|.++..++...
T Consensus 104 ~~~~~l~~~la~~~g~~~~---------i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~ 163 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDEC---------LLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYA 163 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCeE---------EEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHc
Confidence 3444556668888888654 7778889999888876532 5678889999999999999999
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
|. +++.++. +|+++|++++++.. +.+|+++.++|++|.+.|+++|+++|++||+|+++|++|+++
T Consensus 164 g~---~~~~~~~-------~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g 228 (409)
T 3kki_A 164 NA---QAHPFMH-------NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG 228 (409)
T ss_dssp TC---EEEEECT-------TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CC---eEEEecC-------CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 98 7777653 58999999998642 247888899999999999999999999999999999999875
Q ss_pred hccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842 289 ACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 289 ~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
.+. +.... ...++ ...|.++.+.+|+++.+ .|+++.++. .. +.+.. ...+... .
T Consensus 229 ~~g-~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~~-~~-~~~~~~~~~~~~~-----------------~ 286 (409)
T 3kki_A 229 THG-PNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNNE-VN-RCVPFISYPAIFS-----------------S 286 (409)
T ss_dssp TSS-GGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESSS-GG-GTHHHHCHHHHHS-----------------B
T ss_pred ccC-CCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECHH-HH-HHHHHhCcCcccc-----------------C
Confidence 431 11111 11122 35789999999999866 477666543 22 11111 1111111 0
Q ss_pred CCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHH
Q 010842 365 GRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRK 441 (499)
Q Consensus 365 sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 441 (499)
....+. +..++..+ +..+++.++..++++++.+.|++. ++++. +..+++.+.+.. .....+
T Consensus 287 --~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~---------~~~~~~ 350 (409)
T 3kki_A 287 --TLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGD---------ERNTEK 350 (409)
T ss_dssp --CCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEES---------HHHHHH
T ss_pred --CCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCC---------HHHHHH
Confidence 112222 23334333 222567778889999999999987 67654 355667777654 223456
Q ss_pred HHHHHHhcCCEEEEee---eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 442 LLDWVNSTGRVYLTHT---IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 442 l~~~l~~~g~~~~~~~---~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+.++|.++|+.+.... ...+..++|+++. ..+|++||++++++|+++.+.
T Consensus 351 ~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 351 VRDYLESNGVFGSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHTTEECEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCceEeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 8888888885432211 1235688999995 778999999999999998765
No 104
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=2.2e-23 Score=211.71 Aligned_cols=307 Identities=13% Similarity=0.059 Sum_probs=204.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH---
Q 010842 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--- 201 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--- 201 (499)
+....+|+.+++++++++|.+... +++++||+|+..++.++.. ++..|+++..+|.++
T Consensus 65 ~~~~~~e~~ar~~la~~~g~~~~~--------i~~~sGt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~ 125 (407)
T 2dkj_A 65 EVIDRVESLAIERAKALFGAAWAN--------VQPHSGSQANMAVYMALME-----------PGDTLMGMDLAAGGHLTH 125 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred hHHHHHHHHHHHHHHHHhCCCcce--------EEecchHHHHHHHHHHhcC-----------CCCEEEEecccccCccch
Confidence 434477877778999999987542 5666778898888877632 456788888899877
Q ss_pred HHHHHHhCCCCCCeEEeeC--CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 202 AKVCKLAGVSPANIRALPT--SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 202 ~ka~~~~G~g~~~v~~v~~--~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
..+++..|. .++.+++ ++ .++.+|+++|++++++. .+.+|+++.+++ |.+.|+++|.++|++||+++
T Consensus 126 ~~~~~~~g~---~~~~~~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~l 194 (407)
T 2dkj_A 126 GSRVNFSGK---LYKVVSYGVRP-DTELIDLEEVRRLALEH-----RPKVIVAGASAY--PRFWDFKAFREIADEVGAYL 194 (407)
T ss_dssp TCTTSHHHH---HSEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEE
T ss_pred HHHHHhcCc---eEEEEecCCCc-ccCccCHHHHHHHHhhc-----CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEE
Confidence 455556665 4455555 32 24789999999999752 123566655555 47889999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
++|++|+.+....+.... .++..|.++.++||++.++.+ |++++++++...........+..
T Consensus 195 i~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~-------------- 256 (407)
T 2dkj_A 195 VVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ-------------- 256 (407)
T ss_dssp EEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC--------------
T ss_pred EEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc--------------
Confidence 999999874433222111 122479999999999987765 88888754433211111101100
Q ss_pred cccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHH
Q 010842 360 WQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 360 ~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
.+.... ...+..++..+..++++++.++..++++++.+.|++. +++++.+ +..+++++.+.... .
T Consensus 257 ----~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------~ 323 (407)
T 2dkj_A 257 ----GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG--------L 323 (407)
T ss_dssp ----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------C
T ss_pred ----CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccC--------C
Confidence 000001 1133445555445778899999999999999999998 8888753 45677777775311 0
Q ss_pred HHHHHHHHHHhcCCEEEEeee------ECCEEEEEEeccCC---CCcHHHHHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLTHTI------VGGLYMLRFAVGAS---LTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~~~~------~~g~~~lRi~~~~~---~~t~~di~~l~~~l~~~~~~ 492 (499)
....+.+.|.+.|+.+..+.. .....++|+++..+ ..|++|+++++++|+++.++
T Consensus 324 ~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 324 TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 134567777777854433221 11245799998521 37899999999999998776
No 105
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.90 E-value=1.4e-22 Score=206.55 Aligned_cols=335 Identities=12% Similarity=0.068 Sum_probs=219.3
Q ss_pred HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+... ...|...++..++++++.+|+.+.+|.+... ....++|+|||+|+..++.+...
T Consensus 53 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~------- 121 (412)
T 2x5d_A 53 PHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD------- 121 (412)
T ss_dssp HHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC-------
Confidence 34555555555432 2345545667899999999998888863110 00369999999999988877532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++...++..|. +++.+|.+++++|.+|+++|+++++++ +.+|+++.++|+||.+
T Consensus 122 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 122 ----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQC 188 (412)
T ss_dssp ----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCc
Confidence 456788899999999999999999 999999986534678999999887532 3367778999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
-| +++|+++|++||+++++|++|+.+.+........ +.+....|.++.++||+++.| ..+|+++.++ ... +.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~ 266 (412)
T 2x5d_A 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP-ELV-SA 266 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH-HHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH-HHH-HH
Confidence 65 6889999999999999999998865322111111 111124688899999999744 4579988753 222 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+.....+.. .....+..+++...+ +.+.++++.++..++++++.+.|++. ++++. +
T Consensus 267 l~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 324 (412)
T 2x5d_A 267 LARIKSYHD--------------------YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-N 324 (412)
T ss_dssp HHHHHHHHC--------------------CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-C
T ss_pred HHHHHhhhc--------------------cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-C
Confidence 211100000 001233334433333 34667888888899999999999887 77765 3
Q ss_pred CCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 415 RHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 415 ~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+..+ .+++.+...- . .....++.++|.+ .|+.+..+..+. +..++|++++ . ++++|+++++.|.++.
T Consensus 325 ~~~g~~~~~~~~~~~--~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~--~~~~l~~~l~~l~~~l 395 (412)
T 2x5d_A 325 PKASMYVWAKIPEPY--A----HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI-E--NRDRLRQAVRGIKAMF 395 (412)
T ss_dssp CSBSSEEEEECCTTT--G----GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-S--CHHHHHHHHHHHHHHH
T ss_pred CCeeeEEEEEcCCcc--C----CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHH
Confidence 4434 4555663210 0 0013566777754 586544433332 2467999996 3 7899999999999998
Q ss_pred HHHhc
Q 010842 491 DRLFK 495 (499)
Q Consensus 491 ~~l~~ 495 (499)
+++..
T Consensus 396 ~~~~~ 400 (412)
T 2x5d_A 396 RADGL 400 (412)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 77543
No 106
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=1.3e-22 Score=205.19 Aligned_cols=330 Identities=15% Similarity=0.111 Sum_probs=210.0
Q ss_pred HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842 107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186 (499)
Q Consensus 107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~ 186 (499)
.+.+...+... .+..++...+++++ +++++|.+. +++|+|||+|+..++.+.+-.
T Consensus 23 ~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~al~~~~~~~~~~---------- 77 (393)
T 1mdo_A 23 LAAVKTVLDSG--WITTGPKNQELEAA----FCRLTGNQY---------AVAVSSATAGMHIALMALGIG---------- 77 (393)
T ss_dssp HHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHCCSE---------EEEESCHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHhcC--CcCCChHHHHHHHH----HHHHhCCCc---------EEEecChHHHHHHHHHHcCCC----------
Confidence 34455555432 12345666666666 777777653 489999999999888876211
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++++++ +.+|+++ +++|.+.|++
T Consensus 78 ~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~ 144 (393)
T 1mdo_A 78 EGDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLD 144 (393)
T ss_dssp TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHH
T ss_pred CCCEEEeCCCccHhHHHHHHHCCC---EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHH
Confidence 456789999999999999999999 9999999864 3789999999998643 3355544 4799999999
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl 344 (499)
+|.++|+++|+++++|++|+.+..... +.. +. .|.+++++| |+++.+ .+|+++.++++.............
T Consensus 145 ~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~ 217 (393)
T 1mdo_A 145 AIYALGERYGIPVIEDAAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGL 217 (393)
T ss_dssp HHHHHHHHHTCCBCEECTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHcCCeEEEECccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCC
Confidence 999999999999999999985433221 111 11 799999999 999754 567777765543322111110000
Q ss_pred CCCCCCCCCcccCCCccc---CCC--CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----
Q 010842 345 KNKPSESNSVVDFKDWQV---GTG--RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR---- 415 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~---~~s--r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---- 415 (499)
.... .........+.. ..+ .+...+...+++.. .+++++..++..++++++.+.|++.+ +++...+
T Consensus 218 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~ 292 (393)
T 1mdo_A 218 GVDA--WDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQ--LQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEH 292 (393)
T ss_dssp ECC-------------CCEESSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCE
T ss_pred cccc--hhhhcccccccccccccCccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCC
Confidence 0000 000000000111 111 12334444444433 36678888999999999999999986 8875322
Q ss_pred --CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----------------C-----CEEEEEEeccCC
Q 010842 416 --HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----------------G-----GLYMLRFAVGAS 472 (499)
Q Consensus 416 --~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----------------~-----g~~~lRi~~~~~ 472 (499)
...++++++.+.. ......++.+.|.++|+.+..+... . +..++|+++. +
T Consensus 293 ~~~~~~~~v~~~~~~------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~ 365 (393)
T 1mdo_A 293 IHAWHLFIIRVDEAR------CGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF-P 365 (393)
T ss_dssp ECCCSCEEEECCHHH------HSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC-T
T ss_pred CceeEEEEEEecccc------cccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCC-C
Confidence 2335677764200 0001456778888888643221110 0 1236999984 8
Q ss_pred CCcHHHHHHHHHHHHHHHHHH
Q 010842 473 LTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 473 ~~t~~di~~l~~~l~~~~~~l 493 (499)
.+|++|+++++++|+++.+..
T Consensus 366 ~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 366 DMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp TCCHHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHHhcC
Confidence 899999999999999886543
No 107
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=1.8e-22 Score=203.59 Aligned_cols=291 Identities=10% Similarity=0.051 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+.+++++|.+.. +++++||+|+..++.+..+ ++..|+++...|.++..+++..
T Consensus 84 ~~~~~l~~~la~~~g~~~~---------i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 143 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSRA---------LLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS 143 (384)
T ss_dssp HHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCcE---------EEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence 3445555668888888643 7777789999888776522 4567888999999999999999
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~ 288 (499)
|. +++.+|. +|+++|++.+++.. ..+.+|+...++|++|.+.|+++|.++|++||+++++|++|+.+
T Consensus 144 g~---~~~~~~~-------~d~~~l~~~l~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 210 (384)
T 1bs0_A 144 PS---QLRRFAH-------NDVTHLARLLASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG 210 (384)
T ss_dssp SS---EEEEECT-------TCHHHHHHHHHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CC---CEEEeCC-------CCHHHHHHHHHhcC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence 98 8888873 48899999886531 12457788889999999999999999999999999999999755
Q ss_pred hccCccchh--hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCC
Q 010842 289 ACICPEFRH--YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 289 ~~~~~~~~~--~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
... +.... ...+ ...|.++.++||+++ |.| |+++.++ +.. +.+.. ...|.. +
T Consensus 211 ~~~-~~~~~~~~~~~-~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~-~~l~~~~~~~~~-------------------~ 265 (384)
T 1bs0_A 211 VIG-EQGRGSCWLQK-VKPELLVVTFGKGFG-VSG-AAVLCSS-TVA-DYLLQFARHLIY-------------------S 265 (384)
T ss_dssp TSS-GGGCCHHHHTT-CCCSEEEEESSSTTS-SCC-EEEEECH-HHH-HHHHHHCHHHHS-------------------S
T ss_pred eec-CCCCchHHhcC-CCCcEEEeeccchhh-ccC-cEEEeCH-HHH-HHHHHhchhhhc-------------------C
Confidence 321 01111 1112 247899999999998 545 8888753 322 22211 111111 0
Q ss_pred CCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 366 RRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 366 r~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
.....+... .+++.+...++++..++..++++++.+.|++. ++++. ++..+++++.+.. .....++
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~l 334 (384)
T 1bs0_A 266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD---------NSRALQL 334 (384)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES---------HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC---------HHHHHHH
Confidence 011223333 34443321156788888999999999999988 68776 3455566666642 1235678
Q ss_pred HHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.++|.++|+.+.....+ .+..++|+++. ..+|++++++++++|+++
T Consensus 335 ~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 335 AEKLRQQGCWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHTTEECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 88888887543322211 24578999995 778999999999999875
No 108
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.90 E-value=1.5e-22 Score=205.10 Aligned_cols=325 Identities=13% Similarity=0.059 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
+..+.+.+...+... ...|...++..+++++ +++++|.+.+ ..++|+|+|+|+..++.+..+
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~g~~~~-------~v~~~~g~~~al~~~~~~~~~---- 113 (397)
T 2zyj_A 49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAF----VAEWIGVRPE-------EVLITTGSQQALDLVGKVFLD---- 113 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH----HHHHhCCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence 344555555444321 1344444566777777 5555576543 468999999998888776532
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCCc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTTS 258 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt~ 258 (499)
++..|+++..+|.++...++..|. +++.+|.+++ .+|+++|++++++. .+.+| +...++|+
T Consensus 114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~---~~d~~~l~~~l~~~-----~~~~v~~~~~~~np 175 (397)
T 2zyj_A 114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGEE---GPDLDALEEVLKRE-----RPRFLYLIPSFQNP 175 (397)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHC-----CCSCEEECCBSCTT
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCCC---CCCHHHHHHHHhhc-----CCeEEEECCCCcCC
Confidence 456788888999999999999999 9999998753 39999999999751 12244 56788999
Q ss_pred ccccCCh---hHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCC---CCceeEecccccccCCCcceEEEEeC
Q 010842 259 TTAVDNV---EPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIE---RVDSFSFSPHKWLLSYLDCCCLWVKQ 329 (499)
Q Consensus 259 ~G~id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~---~aDsi~~~~hK~l~~p~~~g~l~~r~ 329 (499)
+|.+-|. ++|+++|++||+++++|++|+.+...... .... +.. ....++.+.||+++....+|++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 253 (397)
T 2zyj_A 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP 253 (397)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH--HHHHTCCCEEEEEESTTTTCGGGCCEEEECCH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh--CcccCCCeEEEEecccccccccceeEEEecCH
Confidence 9999765 48999999999999999999876432111 1111 101 12367889999999335689998864
Q ss_pred chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHHHhc-
Q 010842 330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV---LNLQSHIRSDIRLAKMFEGFVKS- 405 (499)
Q Consensus 330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~- 405 (499)
+ +.+.+....... +. ++ ..+...++...+.. +.+++..++..++++++.+.|++
T Consensus 254 ~--~~~~l~~~~~~~----------------~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 254 E--ALQKLVQAKQGA----------------DL-HT---PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE 311 (397)
T ss_dssp H--HHHHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHhh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222221110000 00 00 23334444444321 45677778888889999999987
Q ss_pred CC-CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHH
Q 010842 406 DP-RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHVV 480 (499)
Q Consensus 406 ~~-~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~ 480 (499)
.| ++++..+.....+++++.... ...++.++|.++|+.+..+..+. +..++|+++.. .++++|+
T Consensus 312 ~~~g~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~~i~ 380 (397)
T 2zyj_A 312 VPKEVRYTRPKGGMFVWMELPKGL---------SAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYAT--LDREGIA 380 (397)
T ss_dssp SCTTSEECCCSBSSEEEEECSTTC---------CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSS--SCHHHHH
T ss_pred CCCCeEEccCCccEEEEEEcCCCC---------CHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCC--CCHHHHH
Confidence 57 688765555556667664311 14567888888886554433332 34689999963 3899999
Q ss_pred HHHHHHHHHHHHHhc
Q 010842 481 AAWELIMEGADRLFK 495 (499)
Q Consensus 481 ~l~~~l~~~~~~l~~ 495 (499)
+++++|.++.+++.+
T Consensus 381 ~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 381 EGVRRLGRALKGLLA 395 (397)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887653
No 109
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.90 E-value=2.9e-22 Score=215.64 Aligned_cols=323 Identities=12% Similarity=0.019 Sum_probs=207.3
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-HHHhCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-CKLAGVS 211 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-~~~~G~g 211 (499)
++.+.+++++|.+.. .++++|+|+||..++.+... ++..|+++...|.|+..+ +++.|+
T Consensus 177 e~e~~lA~~~gae~~--------i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga- 236 (730)
T 1c4k_A 177 AAEKHAARVYNADKT--------YFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG- 236 (730)
T ss_dssp HHHHHHHHHTTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC-
T ss_pred HHHHHHHHHHCCCcE--------EEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC-
Confidence 344559999998765 26777777999888877532 567899999999999998 888888
Q ss_pred CCCeEEeeCCCCC---CCccCHHHH-----HHHHHHH-HH--cCCcc-EEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 212 PANIRALPTSVDA---NFSLSPQLL-----RRAVEAD-VE--AGLVP-LFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 212 ~~~v~~v~~~~~~---~~~~d~~~L-----~~~i~~~-~~--~g~~p-~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
.++.++.+.+. .+.+|+++| +++|+++ .+ ....| .+|+++.+ |++|.+.|+++|+++|+++|+++
T Consensus 237 --~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~l 313 (730)
T 1c4k_A 237 --RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYI 313 (730)
T ss_dssp --EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEE
T ss_pred --EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeE
Confidence 88888765321 124788888 7777543 11 01123 46777777 57999999999999999999999
Q ss_pred EeeccccchhccCccchh--hh-cCCCCCc----eeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 280 HVDAAYAGSACICPEFRH--YL-NGIERVD----SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~--~~-~g~~~aD----si~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
|||+||+++..+.+..+. .+ ....++| +++.++||++++|.++|+++++++.. .....++...
T Consensus 314 ivDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-----~g~~~~i~~~----- 383 (730)
T 1c4k_A 314 EFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-----KGQLRYCDHK----- 383 (730)
T ss_dssp EEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-----TTSTTCCCHH-----
T ss_pred EEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-----cCcccccCHH-----
Confidence 999999865444443321 11 1011367 99999999999998899999988642 0111111100
Q ss_pred CcccCCCcccCCCCCCC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCCC-------------
Q 010842 353 SVVDFKDWQVGTGRRFK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPRH------------- 416 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~------------- 416 (499)
..+..-...+.+.+.- ...+-.+++.+..++..+++++..++++++++.|++ +++++++.+..
T Consensus 384 -~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~ 462 (730)
T 1c4k_A 384 -HFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTED 462 (730)
T ss_dssp -HHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHH
T ss_pred -HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccccccccccccccc
Confidence 0000000111122211 123334555554434467789999999999999998 78999865421
Q ss_pred -----------------------c---eE----EEEEecCC--CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842 417 -----------------------F---AL----VCFRLNPY--PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM 464 (499)
Q Consensus 417 -----------------------~---~~----v~f~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 464 (499)
. .+ +.|...+. ..+.-.........+.+.|.++|+.. .. . +...
T Consensus 463 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v-~~--~-~~~~ 538 (730)
T 1c4k_A 463 MANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP-EK--S-DLNS 538 (730)
T ss_dssp HTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC-SE--E-CSSE
T ss_pred ccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE-EE--C-CCCe
Confidence 0 01 45554210 00000000011455677777778532 22 1 3456
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 465 LRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 465 lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
+|+++ ++.+|++++++++++|.++.+.+.
T Consensus 539 ir~~~-s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 539 ILFLM-TPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp EEEEC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe-CCCCCHHHHHHHHHHHHHHHHhcc
Confidence 89988 588999999999999999987663
No 110
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.90 E-value=1e-21 Score=200.18 Aligned_cols=300 Identities=13% Similarity=0.116 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH---
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK--- 206 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~--- 206 (499)
...++.+++++++|.+. .++|+|||+|+..++.+... ++..|+++...|.++...+.
T Consensus 57 ~~~~l~~~la~~~g~~~---------~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~~~ 116 (412)
T 2cb1_A 57 TAKALEERLKALEGALE---------AVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQVL 116 (412)
T ss_dssp HHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence 34445556889998753 48999999999998886521 45678889999988776643
Q ss_pred -HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 207 -LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 207 -~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
..|+ +++.+|. |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 117 ~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 117 SLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp TTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred HHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 4677 7888875 378898888653 347888999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCC-----CCCCcccCC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPS-----ESNSVVDFK 358 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~-----~~~~~~~~~ 358 (499)
+.+..... ... ..+|++++++||+++.|.+ .|.++++++. .+.+.....++....... .........
T Consensus 180 ~~~~~~~~---~~~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r 253 (412)
T 2cb1_A 180 GAAGALCR---PLA---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVR 253 (412)
T ss_dssp GTTTTSCC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHH
T ss_pred ccccccCC---ccc---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHH
Confidence 87622111 111 1489999999999998876 6777766532 110000001111000000 000000000
Q ss_pred Ccc-cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceEE
Q 010842 359 DWQ-VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFALV 420 (499)
Q Consensus 359 ~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v 420 (499)
.++ ...+....+...|+.+..+ +.+.+++++..++++++.+.|.+.|+++.+..| ..+++
T Consensus 254 ~~~~~~~g~~~~~~~a~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv 331 (412)
T 2cb1_A 254 TLGLSLCGMALSPFNAYLLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPIL 331 (412)
T ss_dssp HHHTTTTCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEE
T ss_pred HHHHHhcCCCCChHHhHHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEE
Confidence 011 0112233456666666544 666778888889999999999999998855222 34688
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee---------eE---------------CC--EEEEEEeccCCCC
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT---------IV---------------GG--LYMLRFAVGASLT 474 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---------~~---------------~g--~~~lRi~~~~~~~ 474 (499)
+|.+ + . .+.+.+.+.+.|... .+. .. .| ...+|+|++ ..+
T Consensus 332 ~~~~-~-~----------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g-~~~ 397 (412)
T 2cb1_A 332 TLDL-G-D----------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG-LED 397 (412)
T ss_dssp EEEC-S-S----------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC-SSC
T ss_pred EEEe-C-C----------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec-cCC
Confidence 8988 4 2 233444455557654 321 00 01 468999995 889
Q ss_pred cHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIME 488 (499)
Q Consensus 475 t~~di~~l~~~l~~ 488 (499)
++++|+.+.++|++
T Consensus 398 ~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 398 PLDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 111
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.90 E-value=1.8e-22 Score=206.14 Aligned_cols=339 Identities=13% Similarity=0.061 Sum_probs=222.8
Q ss_pred HHHHHHHHHHcccCC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 104 GFLGEMLCACFNSVG--FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
..+.+.+...+.... ..|....+..++++++.+|+.+.+|.+... ....++|+|||+|+..++.+...
T Consensus 44 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------ 113 (422)
T 3fvs_A 44 DFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD------ 113 (422)
T ss_dssp HHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC------
Confidence 344555555554322 355555567899999999999999875320 01369999999999888876632
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC----CC------CCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV----DA------NFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~----~~------~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
++..|+++..+|.++...++..|. +++.+|++. +| +|.+|+++|+++++++ +.+|+
T Consensus 114 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~ 179 (422)
T 3fvs_A 114 -----EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALV 179 (422)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEE
T ss_pred -----CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEE
Confidence 456788889999999999999999 999999886 22 5789999999988643 44788
Q ss_pred EecCCCcccccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEE
Q 010842 252 ATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCL 325 (499)
Q Consensus 252 ~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l 325 (499)
++.++|++|.+- ++++|+++|++||+++++|++|+.+........... ......+.+..+.+|+++.| ..+|++
T Consensus 180 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 259 (422)
T 3fvs_A 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWV 259 (422)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred ECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEE
Confidence 889999999997 599999999999999999999987543221111111 11112446778899999744 668888
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---------cHHHHHHHHHHHHHHH
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---------GVLNLQSHIRSDIRLA 396 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~~~~~a 396 (499)
+.+++ .+ +.+....... +.....+..+++...+ ..+.++++.++..+++
T Consensus 260 ~~~~~-~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (422)
T 3fvs_A 260 LGPDH-IM-KHLRTVHQNS--------------------VFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317 (422)
T ss_dssp ECCHH-HH-HHHHHHHHTT--------------------TCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHH
T ss_pred EeCHH-HH-HHHHHHHhhc--------------------cCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHH
Confidence 77653 22 2221100000 0001223333333333 2456788888999999
Q ss_pred HHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CC---cchhHHHHHHHHHHHH-hcCCEEEEeeeE-------CCEEE
Q 010842 397 KMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SG---SADTEMLNRKLLDWVN-STGRVYLTHTIV-------GGLYM 464 (499)
Q Consensus 397 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~---~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g~~~ 464 (499)
+++.+.|++. ++++..+.....+++.+..... .. .........++.+.+. +.|+.+..+..+ .+..+
T Consensus 318 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~ 396 (422)
T 3fvs_A 318 DHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHY 396 (422)
T ss_dssp HHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSE
T ss_pred HHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCe
Confidence 9999999988 8887765555555555532100 00 0000000235555544 457554444433 24678
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 465 LRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 465 lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+|++++ .++++|++++++|+++.++
T Consensus 397 iRis~~---~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 397 IRFCFV---KDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEECC---CCHHHHHHHHHHHHHHHHC
T ss_pred EEEEec---CCHHHHHHHHHHHHHHHhh
Confidence 999986 3999999999999987654
No 112
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.90 E-value=4.7e-22 Score=201.36 Aligned_cols=316 Identities=13% Similarity=0.081 Sum_probs=203.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
+|...+++++ +++++|.+ ..++++|||+|+..++.+.+-. ++..|+++..+|.++..
T Consensus 31 g~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~ 87 (394)
T 1o69_A 31 GEFVNRFEQS----VKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVA 87 (394)
T ss_dssp THHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTH
T ss_pred ChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHH
Confidence 4556666666 77777763 2599999999999888876211 45678999999999999
Q ss_pred HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
+++..|+ +++.+|+++ +|.+|+++|+++|++.. ..+.+|+++. ++|...|+++|.++|+++|+++|+|+
T Consensus 88 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~De 156 (394)
T 1o69_A 88 PICYLKA---KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDA 156 (394)
T ss_dssp HHHHTTC---EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEEC
Confidence 9999999 999999884 46999999999997521 1133555554 78999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+|+.+...... . ...+..+|.++++.||.++ |.++|+++++++............+.... ..+ . ..+
T Consensus 157 a~~~g~~~~~~--~-~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-------~~~-~-~~~ 223 (394)
T 1o69_A 157 AEALGSFYKNK--A-LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC-------LHY-E-HLD 223 (394)
T ss_dssp TTCTTCEETTE--E-TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS-------SSC-C-CSS
T ss_pred cCcccceeCCc--c-cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC-------ccc-c-ccc
Confidence 99833322211 1 1112348899999999876 66899999876553322211111111000 000 0 112
Q ss_pred CCCCCCc--HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCC--------
Q 010842 364 TGRRFKS--LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYP-------- 428 (499)
Q Consensus 364 ~sr~~~a--l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~-------- 428 (499)
.+.+++. +...+++.. .+.+++.+++..++++++.+.|++. ++++.++ .+.++++.+.+..
T Consensus 224 ~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 299 (394)
T 1o69_A 224 YGYNYRLSNVLGAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQK 299 (394)
T ss_dssp CCCBCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCE
T ss_pred cCcccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccc
Confidence 2333333 333333333 3567888899999999999999887 6665432 2235677765310
Q ss_pred ----CCCcchhHHHHHHHHHHHHhcCCEEEEee-------eECC-------------EEEEEEeccCCCCcHHHHHHHHH
Q 010842 429 ----HSGSADTEMLNRKLLDWVNSTGRVYLTHT-------IVGG-------------LYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 429 ----~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g-------------~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
............++.+.|.++|+.+-.+. .+.. ...+|+.. ++.+|++||+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~edi~~~~~ 378 (394)
T 1o69_A 300 DINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKDDVYEISK 378 (394)
T ss_dssp EEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHHHHHHHHH
T ss_pred cccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHHHHHHHHH
Confidence 00000001124567888888886432220 1111 02355555 68999999999999
Q ss_pred HHHHHHH
Q 010842 485 LIMEGAD 491 (499)
Q Consensus 485 ~l~~~~~ 491 (499)
+|+++.+
T Consensus 379 ~l~~~~~ 385 (394)
T 1o69_A 379 LILKSIK 385 (394)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988754
No 113
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=6.9e-22 Score=198.71 Aligned_cols=323 Identities=13% Similarity=0.059 Sum_probs=216.3
Q ss_pred HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
..+.+.+...+... ...|...++..++++++.+|+.+.+|.+.+. ....++|+|||+|+..++.+..+
T Consensus 41 ~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~------- 109 (376)
T 2dou_A 41 EAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE------- 109 (376)
T ss_dssp HHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC-------
Confidence 34555666655432 2344443567889999999998888986210 01369999999999888876532
Q ss_pred hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..|+++..+|.++..+++..|. +++.+|+ ++ ++.+|+++|+++++++ +.+|+++.++|++|.+
T Consensus 110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~-~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~ 174 (376)
T 2dou_A 110 ----PEDLLLLPEVAYPSYFGAARVASL---RTFLIPL-RE-DGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAV 174 (376)
T ss_dssp ----TTCEEEEESSCCHHHHHHHHHTTC---EEEEECB-CT-TSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCC
T ss_pred ----CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeC-CC-CCCCCHHHHHHhhccC------ceEEEECCCCCCcCcc
Confidence 456788899999999999999999 9999998 33 4789999999999654 3477778899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842 263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~ 336 (499)
-| +++|+++|++||+++++|++|+.+.... ....... +....+.++.+.+|+++.| ..+|+++.++ +.. +.
T Consensus 175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~ 251 (376)
T 2dou_A 175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE-EAL-AR 251 (376)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH-HHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH-HHH-HH
Confidence 66 7889999999999999999998764321 1111111 1123567788999999744 4578887643 322 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
+........ . ....+...++...+ +.+.+++..++..++++++.+.|++. +++..+
T Consensus 252 l~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~ 309 (376)
T 2dou_A 252 LERVKGVID------------------F--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPP 309 (376)
T ss_dssp HHHHHHHHC------------------C--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCC
T ss_pred HHHHHHhcc------------------c--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCC
Confidence 211100000 0 00123333343333 35667888888889999999999887 776533
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.....+++++.... ...++.++|.++|+.+..+..+. +..++|++++ .++++|+++++.|.++
T Consensus 310 ~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 310 RATMYLWGRLPEGV---------DDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALV---RPLEELLEAAKRIREA 374 (376)
T ss_dssp CBSSEEEEECCTTC---------CHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHT
T ss_pred CeeEEEEEECCCCC---------CHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 33334556664311 13567788888885544433332 2468999986 2789999999998875
No 114
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.90 E-value=2.2e-23 Score=209.09 Aligned_cols=336 Identities=11% Similarity=0.004 Sum_probs=204.9
Q ss_pred cCCCCCChHHHHHHHHHHHc----ccCCcc---cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHH
Q 010842 95 FFPATVSTAGFLGEMLCACF----NSVGFN---WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSI 166 (499)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~----n~~~~~---~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~ 166 (499)
+.|++...|..+.+.+...+ ++.... ...++.+.++-+++++.+++++|.++.. ..+| |+|||+|+
T Consensus 31 ~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~ 104 (386)
T 3qm2_A 31 FSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQF 104 (386)
T ss_dssp CCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHH
Confidence 44555555555555554333 111111 1124555666677888999999997531 3477 69999998
Q ss_pred HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh-CCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHc
Q 010842 167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA-GVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEA 243 (499)
Q Consensus 167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~ 243 (499)
.+++..... ++..+++....|++. ++...+ ..| ++..+|++ ++| ..+++++++.+|+++++
T Consensus 105 n~ai~~l~~-----------~gd~v~~~~~~~~~~-~~~~~a~~~G--~v~~v~~~~~~~G-~~~~~~~~~~~l~~~t~- 168 (386)
T 3qm2_A 105 AGVPLNLLG-----------DKTTADYVDAGYWAA-SAIKEAKKYC--APQIIDAKITVDG-KRAVKPMREWQLSDNAA- 168 (386)
T ss_dssp HHHHHHHCT-----------TCCEEEEEESSHHHH-HHHHHHTTTS--EEEEEECEEEETT-EEEECCGGGCCCCTTCS-
T ss_pred HHHHHhccC-----------CCCeEEEEeCCHHHH-HHHHHHHHhC--CeEEEecCcccCC-CCCCchHHHhhcCCCCc-
Confidence 887765421 223333333345553 222222 234 58889987 444 23788888877766544
Q ss_pred CCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842 244 GLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC 322 (499)
Q Consensus 244 g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 322 (499)
+|++++.+|.+|.+ +|+++|+ +|+++|||++++.+....+- ...|.+++++|||++ |.|+
T Consensus 169 -----lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv--------~~~~~~~~s~hK~lG-P~G~ 229 (386)
T 3qm2_A 169 -----YLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDV--------SRYGVIYAGAQKNIG-PAGL 229 (386)
T ss_dssp -----CEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTC-CTTE
T ss_pred -----EEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCc--------cccCEEEEecccccC-CCcc
Confidence 68899999999995 9999996 89999999999877654432 124568899999996 9999
Q ss_pred eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 010842 323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFE 400 (499)
Q Consensus 323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~ 400 (499)
|++++|++.. .+.....+.++.... ..... .. .++... ....+-.+++.+... |++++.++..+++++++
T Consensus 230 g~l~v~~~~~-~~~~~~~p~~~~~~~-----~~~~~-~~-~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~ 301 (386)
T 3qm2_A 230 TLVIVREDLL-GKAHESCPSILDYTV-----LNDND-SM-FNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLY 301 (386)
T ss_dssp EEEEEEGGGC-SCCCTTSCGGGCHHH-----HHHC---------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHH-hhhcccCCcHHHHHH-----HhhcC-CC-CCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999997531 110011121211000 00000 00 011111 234566777777677 89999999999999999
Q ss_pred HHHhcCCCe-EEEcCC--C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842 401 GFVKSDPRF-EIVVPR--H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476 (499)
Q Consensus 401 ~~L~~~~~~-~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~ 476 (499)
+.|+++ ++ ....++ . ..+++|.+.+.. . ...+...|.+.|++...+ ......+|+|+. ..+|+
T Consensus 302 ~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~------~---~~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~-~~~t~ 368 (386)
T 3qm2_A 302 GVIDNS-DFYRNDVAQANRSRMNVPFQLADNT------L---DKVFLEESFAAGLHALKG--HRVVGGMRASIY-NAMPI 368 (386)
T ss_dssp HHHHTC-SSEECCBCGGGBCSSEEEEEESSGG------G---HHHHHHHHHHTTEECCBC--CTTTCSEEEECC-TTSCH
T ss_pred HHHHHC-CCcccCCCHHHcCceEEEEECCCcc------c---cHHHHHHHHHCCCEEeCC--CCCcCeEEEEcC-CCCCH
Confidence 999988 55 332222 2 358899886421 1 245666677788543222 111234999995 78999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEGADR 492 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~ 492 (499)
+|||+++++|+++.++
T Consensus 369 edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 369 EGVKALTDFMIDFERR 384 (386)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 115
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.89 E-value=2e-21 Score=196.41 Aligned_cols=337 Identities=11% Similarity=0.090 Sum_probs=208.2
Q ss_pred CChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 100 VSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 100 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
+..+..+.+.+...+... .|..++...++|++ +++++|.+. .+++++||+|+..++.+++...
T Consensus 11 ~~~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sGt~a~~~al~~~~~~~-- 73 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDSK--MFTMGEYVKQYETQ----FAKTFGSKY---------AVMVSSGSTANLLMIAALFFTK-- 73 (390)
T ss_dssp CCCCHHHHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHTTSSS--
T ss_pred CCCCHHHHHHHHHHHHcC--CCCCChHHHHHHHH----HHHHHCCCc---------EEEECCHHHHHHHHHHHHHhhh--
Confidence 333333444455444322 24456666777766 777788763 3899999999998888763100
Q ss_pred Hhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 180 AVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 180 ~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
..+. ++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|+++ +.+|+++ ++
T Consensus 74 ---~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~ 137 (390)
T 3b8x_A 74 ---KPRLKKGDEIIVPAVSWSTTYYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDS------TKAILTV---NL 137 (390)
T ss_dssp ---SCSCCTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTT------EEEEEEE---CG
T ss_pred ---hcCCCCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcC------CeEEEEE---CC
Confidence 0001 456789999999999999999999 9999999865 4799999999998653 2355554 36
Q ss_pred ccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHH--
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVK-- 335 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~-- 335 (499)
+|...|+++|+++|+++|+++|+|++|+.+..... .. .+. ....++++.+.|.+.+|.| |+++++++....+
T Consensus 138 ~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~ 212 (390)
T 3b8x_A 138 LGNPNNFDEINKIIGGRDIILLEDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILL 212 (390)
T ss_dssp GGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHH
T ss_pred ccChhhHHHHHHHHHHcCCEEEEECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHH
Confidence 78999999999999999999999999985543311 11 121 1223444444455555544 8888776443211
Q ss_pred hhcCCccCCCCCC--------CCCCCcccCCCcccCCCCC--CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 336 ALSTDPEYLKNKP--------SESNSVVDFKDWQVGTGRR--FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 336 ~~~~~~~yl~~~~--------~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
.+... .+..+.. ...........+. ..+.+ ...+..++++..+ +.+++..++..++++++.+.|++
T Consensus 213 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~ 288 (390)
T 3b8x_A 213 CIRAH-GWTRNLPKKNKVTGVKSDDQFEESFKFV-LPGYNVRPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKD 288 (390)
T ss_dssp HHTBT-TBSTTSCSEETTTEECCSCTTTSSSCBC-SCCCBCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhc-CCCcccccccccccccccccccccccee-ccccccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111 1000000 0000000000011 12222 3456667666654 77889999999999999999999
Q ss_pred CCCeEEEcCC-CceE--EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---ee-----e-EC--C----------
Q 010842 406 DPRFEIVVPR-HFAL--VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HT-----I-VG--G---------- 461 (499)
Q Consensus 406 ~~~~~~~~~~-~~~~--v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~-----~-~~--g---------- 461 (499)
+|++++..++ ..+. +.+.+.+.. .. ...++.+.|.++|+.+-. ++ . +. +
T Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~~~---~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (390)
T 3b8x_A 289 HPYLDVQQETGESSWFGFSFIIKKDS---GV----IRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNA 361 (390)
T ss_dssp CSSEEECCCCSBCCCCEEEEEECTTS---CC----CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHH
T ss_pred CCCcccCCCCCCcccEEEEEEecCcC---cc----cHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHH
Confidence 9999876532 2232 444554210 00 135677777777854322 11 1 11 0
Q ss_pred ----EEEEEEeccCCCCcHHHHHHHHHHH
Q 010842 462 ----LYMLRFAVGASLTDERHVVAAWELI 486 (499)
Q Consensus 462 ----~~~lRi~~~~~~~t~~di~~l~~~l 486 (499)
...+|+++ ++.+|++||++++++|
T Consensus 362 ~~~~~~~l~l~~-~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 362 EYLDKNGLFVGN-HQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHHEEEEEC-CSSCCHHHHHHHHHHT
T ss_pred HHHhcCEEEeeC-CCCCCHHHHHHHHHhh
Confidence 13699998 5999999999999876
No 116
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.89 E-value=3.3e-23 Score=207.76 Aligned_cols=318 Identities=15% Similarity=0.129 Sum_probs=209.4
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
..+.+.+...+... .|..++...++|++ +++++|.+. +++++|||+|+..++.+++-.
T Consensus 16 ~~v~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~sGt~al~~al~~~~~~------- 73 (367)
T 3nyt_A 16 DKIDAGIQRVLRHG--QYILGPEVTELEDR----LADFVGAKY---------CISCANGTDALQIVQMALGVG------- 73 (367)
T ss_dssp HHHHHHHHHHHHHC--CCSSCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHhcC--CccCChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHhCCC-------
Confidence 34444455544432 34456777777776 778888763 499999999999988876311
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++..++...|+ +++.++++++ ++.+|+++|+++|++++ .+|+ +++++|...
T Consensus 74 ---~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~~~~G~~~ 137 (367)
T 3nyt_A 74 ---PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPRT------KAII---PVSLYGQCA 137 (367)
T ss_dssp ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTTE------EEEC---CBCGGGCCC
T ss_pred ---CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcCC------cEEE---eeCCccChh
Confidence 466899999999999999999999 9999999865 37999999999985432 2444 677999999
Q ss_pred ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842 264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
|+++|.++|+++|+++|+|++|+.+....... .+. ..|.++++ +||+++.+..+|+++.+++...........
T Consensus 138 ~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~----~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~ 212 (367)
T 3nyt_A 138 DFDAINAIASKYGIPVIEDAAQSFGASYKGKR----SCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIAR 212 (367)
T ss_dssp CHHHHHHHHHHTTCCBEEECTTTTTCEETTEE----TTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTB
T ss_pred hHHHHHHHHHHcCCEEEEECccccCCeECCee----ccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999997544322111 111 12777777 699998744577777766544322111110
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----C
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----H 416 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~ 416 (499)
+ .. ...+....+..+.+...+..++.+..+ +.+++..++..++++++.+.|++. ++.+...+ .
T Consensus 213 -~---g~-----~~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~ 280 (367)
T 3nyt_A 213 -H---GQ-----DRRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISV 280 (367)
T ss_dssp -T---TE-----EETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECC
T ss_pred -c---CC-----CcCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCcee
Confidence 0 00 000000011223334455555555554 567888889999999999999987 45543222 1
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--e------EC------------CEEEEEEeccCCCCcH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--I------VG------------GLYMLRFAVGASLTDE 476 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~~------------g~~~lRi~~~~~~~t~ 476 (499)
...+.+... . .+.+.+.|.++|+.+.... . +. ....+|+.+ ++.+|+
T Consensus 281 ~~~~~~~~~--~----------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~-~~~~t~ 347 (367)
T 3nyt_A 281 YAQYTVRMD--N----------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPM-HPYLDT 347 (367)
T ss_dssp CSSEEEECS--S----------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECC-CTTCCH
T ss_pred eEEEEEEeC--C----------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccC-CCCCCH
Confidence 223333332 1 3567777777786332111 0 11 135799998 699999
Q ss_pred HHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEG 489 (499)
Q Consensus 477 ~di~~l~~~l~~~ 489 (499)
+||+++++.|++.
T Consensus 348 ~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 348 ASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999764
No 117
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.89 E-value=1.1e-21 Score=198.97 Aligned_cols=299 Identities=14% Similarity=0.102 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV 210 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~ 210 (499)
..++.+.+++++|.+.. +++++|+++|+.++.+..... ++..|+++...|.++..+++..|.
T Consensus 93 ~~~l~~~la~~~~~~~~---------i~~~sG~~a~~~~~~~l~~~~---------~gd~Vl~~~~~~~~~~~~~~~~g~ 154 (401)
T 2bwn_A 93 HRRLEAEIAGLHQKEAA---------LVFSSAYNANDATLSTLRVLF---------PGLIIYSDSLNHASMIEGIKRNAG 154 (401)
T ss_dssp HHHHHHHHHHHTTCSEE---------EEESCHHHHHHHHHHHHHHHS---------TTCEEEEETTCCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCCcE---------EEECCcHHHHHHHHHHHhcCC---------CCCEEEECchhhHHHHHHHHHcCC
Confidence 33445558888887543 444556668877766542210 456788899999999999999999
Q ss_pred CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842 211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC 290 (499)
Q Consensus 211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~ 290 (499)
+++.+|.+ |+++|++.++.... ..+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+.+
T Consensus 155 ---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 155 ---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY 222 (401)
T ss_dssp ---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred ---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc
Confidence 99999864 78999998864210 2356899999999999999999999999999999999999984432
Q ss_pred cCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842 291 ICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR 366 (499)
Q Consensus 291 ~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 366 (499)
.+..... ..++ +..|.+..+.+|+++.|. |+++.+ +... +.+.. ...+.... .+.
T Consensus 223 -~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~~-~~~~-~~l~~~~~~~~~~~----------------~~~ 281 (401)
T 2bwn_A 223 -GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAAS-ARMV-DAVRSYAPGFIFST----------------SLP 281 (401)
T ss_dssp -STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEEC-HHHH-HHHHHHCHHHHTSB----------------CCC
T ss_pred -CCCCceeeeccCccccCcEEEeechhhccCCC--CEEecC-HHHH-HHHHHhCcCceecC----------------CCC
Confidence 1111111 1222 246888889999998653 776654 3222 22211 11111100 010
Q ss_pred CCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV 446 (499)
Q Consensus 367 ~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l 446 (499)
......+..+++.+...+++++.++..++++++.+.|++. +++++. +..++++|.+.. .....++.++|
T Consensus 282 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~L 350 (401)
T 2bwn_A 282 PAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD---------PVHTKAVSDML 350 (401)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC---------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC---------hHHHHHHHHHH
Confidence 1122344556666655667888999999999999999987 777663 455677776642 12245677777
Q ss_pred H-hcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 447 N-STGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 447 ~-~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
. +.|+.+.....+ .+..++|+++. ..+|++||++++++|+++.++
T Consensus 351 ~~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 351 LSDYGVYVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp HHHHCEECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred HhcCCEEEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence 5 667543222211 23458999995 778999999999999987654
No 118
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.3e-23 Score=211.37 Aligned_cols=338 Identities=11% Similarity=0.065 Sum_probs=222.4
Q ss_pred hHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 102 TAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
+|..+.+.+...+.. ....|....+..++++++.+|+.+.+|.+.+. ...++|+|||+|+..++.+..+
T Consensus 71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~----- 140 (447)
T 3b46_A 71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN----- 140 (447)
T ss_dssp CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC-----
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC-----
Confidence 344566666666654 23456555567899999999998888864221 1469999999999988887632
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC----------CCccCHHHHHHHHHHHHHcCCccEEE
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA----------NFSLSPQLLRRAVEADVEAGLVPLFL 250 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~----------~~~~d~~~L~~~i~~~~~~g~~p~~v 250 (499)
++..|+++...|.++..+++..|. +++.||+++++ +|.+|+++|+++++++ +.+|
T Consensus 141 ------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v 205 (447)
T 3b46_A 141 ------AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAV 205 (447)
T ss_dssp ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEE
T ss_pred ------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEE
Confidence 456788888999999999999999 99999987542 4789999999988632 4478
Q ss_pred EEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceE
Q 010842 251 CATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCC 324 (499)
Q Consensus 251 v~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~ 324 (499)
+++.++|+||.+ +++++|+++|++||+++++|++|+.+.+..+ .......+....|.++.+.+|+++.| ..+|+
T Consensus 206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~ 285 (447)
T 3b46_A 206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGW 285 (447)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEE
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEE
Confidence 888999999999 5799999999999999999999987543211 11111011124788999999999744 45899
Q ss_pred EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhc-HHHHHHHHHHHHHHHHHHH
Q 010842 325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYG-VLNLQSHIRSDIRLAKMFE 400 (499)
Q Consensus 325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g-~~g~~~~~~~~~~~a~~l~ 400 (499)
++.++++.. +.+.....+.. .+ ...+...+ ++.... .+.++++.++..++++++.
T Consensus 286 ~~~~~~~l~-~~l~~~~~~~~------------------~~--~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~ 344 (447)
T 3b46_A 286 VLSLNAELL-SYAAKAHTRIC------------------FA--SPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT 344 (447)
T ss_dssp EECSCHHHH-HHHHHHHHHHT------------------SS--CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHH-HHHHHHHhhcc------------------CC--CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence 988444333 22211000000 00 01222222 333221 3457778888889999999
Q ss_pred HHHhcCCCeEEEcCCCceEEEEEecCCCCCCcc----hh--HHHHHHHHHHHHh-cCCEEEEeeeEC-------CEEEEE
Q 010842 401 GFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA----DT--EMLNRKLLDWVNS-TGRVYLTHTIVG-------GLYMLR 466 (499)
Q Consensus 401 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~----~~--~~~~~~l~~~l~~-~g~~~~~~~~~~-------g~~~lR 466 (499)
+.|++. ++++..+.....+++.+.....-... .. .....++.++|.+ .|+.+..+..+. +..++|
T Consensus 345 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iR 423 (447)
T 3b46_A 345 SIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLR 423 (447)
T ss_dssp HHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEE
T ss_pred HHHHHC-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEE
Confidence 999987 78776444444555666431000000 00 0123467777764 675444333332 246899
Q ss_pred EeccCCCCcHHHHHHHHHHHHHH
Q 010842 467 FAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 467 i~~~~~~~t~~di~~l~~~l~~~ 489 (499)
++++ .++++|++++++|.++
T Consensus 424 ls~~---~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 424 FAVC---KDDAYLENAVERLKLL 443 (447)
T ss_dssp EECC---SCHHHHHHHHHHGGGG
T ss_pred EEEe---CCHHHHHHHHHHHHHH
Confidence 9996 3789999999998763
No 119
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=3.5e-22 Score=202.74 Aligned_cols=311 Identities=12% Similarity=0.087 Sum_probs=203.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..+...++|+++++++++++|.+... +++++||+|+..++.++.. ++..|+++..+|.++.
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~--------i~~~sGt~a~~~a~~~~~~-----------~gd~Vl~~~~~~~~~~ 123 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHAN--------VQPHSGAQANMAVYFTVLE-----------HGDTVLGMNLSHGGHL 123 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCT
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceE--------EEecCcHHHHHHHHHHhcC-----------CCCEEEEecccccchh
Confidence 34667789988999999999987542 5556779999988887732 4567888888887764
Q ss_pred H-H--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 203 K-V--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 203 k-a--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
. . +...|.+. .++.++++++ ++.+|+++|++++++.. +.+|++ .+ +..|...|+++|.++|++||+++
T Consensus 124 ~~~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~-~~-~~~~~~~~l~~i~~l~~~~~~~l 194 (405)
T 2vi8_A 124 THGSPVNFSGVQY-NFVAYGVDPE-THVIDYDDVREKARLHR-----PKLIVA-AA-AAYPRIIDFAKFREIADEVGAYL 194 (405)
T ss_dssp TTTCTTSHHHHHS-EEEEECBCTT-TCSBCHHHHHHHHHHHC-----CSEEEE-CC-SSCCSCCCHHHHHHHHHHHTCEE
T ss_pred cccchhhhcccee-EEEecccccc-cCCcCHHHHHHHHHhcC-----CeEEEE-eC-CCCCccCCHHHHHHHHHHcCCEE
Confidence 3 1 12323211 5667776533 46899999999997631 224444 33 34577789999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~ 358 (499)
|+|++|+.+....+... ..+...|+++.++||++++|.| |++++++ +.. +.+... ..+..
T Consensus 195 i~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~-~~l~~~~~~~~~------------- 255 (405)
T 2vi8_A 195 MVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQE-QFA-KQIDKAIFPGIQ------------- 255 (405)
T ss_dssp EEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEECH-HHH-HHHHHHHTTTTC-------------
T ss_pred EEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEcH-HHH-HHHHhhhccccc-------------
Confidence 99999985433221111 1233589999999999987777 8888763 322 222111 01100
Q ss_pred CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhH
Q 010842 359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
++... ....+..++..+..++++++.++..++++++.+.|++. +++++.+ ...+.+++.+....
T Consensus 256 -----~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------- 321 (405)
T 2vi8_A 256 -----GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQ-------- 321 (405)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------
T ss_pred -----CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCC--------
Confidence 01011 11223344554444678899999999999999999998 8888754 34567777765311
Q ss_pred HHHHHHHHHHHhcCCEEEEee------eECCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHHHh
Q 010842 437 MLNRKLLDWVNSTGRVYLTHT------IVGGLYMLRFAVGA---SLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.....+.+.|.++|+.+..+. ...+..++|+++.. +.++++|+++++++|+++.+++.
T Consensus 322 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 322 LTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred CCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 013456667777785443321 01123569999852 14689999999999999876543
No 120
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.89 E-value=3.3e-21 Score=197.13 Aligned_cols=327 Identities=16% Similarity=0.087 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
|..+.+.+...+..+ .|.. ++...+++++ +++++|.+. .++|+|||+|+..++.+..
T Consensus 31 p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~----la~~~~~~~---------v~~~~ggt~al~~~l~~l~------- 88 (424)
T 2po3_A 31 RARLYERLDRALDSQ--WLSNGGPLVREFEER----VAGLAGVRH---------AVATCNATAGLQLLAHAAG------- 88 (424)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSCHHHHHHHHH----HHHHHTSSE---------EEEESCHHHHHHHHHHHHT-------
T ss_pred hHHHHHHHHHHHhcC--CcccCCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcC-------
Confidence 444555555555432 2444 5666667666 677777642 4999999999998888763
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++..+|.++..++...|+ +++.+|++++ ++.+|+++|+++++++ +.+|+++ +++|.
T Consensus 89 -----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~ 150 (424)
T 2po3_A 89 -----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGV---HLWGR 150 (424)
T ss_dssp -----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEE---CGGGC
T ss_pred -----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEE---CCCCC
Confidence 235788899999999999999999 9999999863 4789999999988643 3355554 37999
Q ss_pred cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcC
Q 010842 262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~ 339 (499)
+.++++|+++|+++|+++++|++|+.+..... .. +.. ..|.++.++| |+++. ..+|+++.++++........
T Consensus 151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~~--~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~ 224 (424)
T 2po3_A 151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AGS--LGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRAL 224 (424)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TTS--SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-ccc--ccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999984322211 11 111 1466666665 88875 56787777654433221111
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH--- 416 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--- 416 (499)
. .+.... .+... ......++..+..++++.. .++++++.++..++++++.+.|+++|++++..++.
T Consensus 225 ~-~~~~~~------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 293 (424)
T 2po3_A 225 H-NFGFDL------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGL 293 (424)
T ss_dssp H-BTTTTC------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSC
T ss_pred H-hcCccc------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCc
Confidence 0 000000 00000 1112224445555555543 36788888999999999999999988998875332
Q ss_pred --ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eEC------C------E-------EEEEEeccCCC
Q 010842 417 --FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVG------G------L-------YMLRFAVGASL 473 (499)
Q Consensus 417 --~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~------g------~-------~~lRi~~~~~~ 473 (499)
+.++.+.+.+.. ......++.+.|.+.|+.+.... ... + . ..+|+++ +..
T Consensus 294 ~~~~~~~i~~~~~~------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~-~~~ 366 (424)
T 2po3_A 294 NNHQYVIVEIDEAT------TGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPT-GTA 366 (424)
T ss_dssp CCCCCEEEEECHHH------HSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECC-STT
T ss_pred cccEEEEEEECCcc------chhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeC-CCC
Confidence 245556554200 00013567777777785432211 000 0 0 1277776 588
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l 493 (499)
+|++|+++++++|+++.++.
T Consensus 367 ~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 367 IGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999887654
No 121
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=3.2e-22 Score=203.32 Aligned_cols=326 Identities=10% Similarity=-0.011 Sum_probs=218.1
Q ss_pred HHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 105 FLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 105 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
.+.+.+...+... ...|...++..++++++.+|+.+.+|.+.+. ....++|+|+|+|+..++.+..+
T Consensus 64 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~-------- 131 (404)
T 2o1b_A 64 GIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN-------- 131 (404)
T ss_dssp HHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC--------
Confidence 4555555555321 2235444567899999999999988975110 01368999999999888877632
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++..+++..|. +++.+|.+++ ++.+|+++|++++++++ .+|+++.++|++|.+-
T Consensus 132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~~ 198 (404)
T 2o1b_A 132 ---PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEPP-HYLPDWSKVDSQIIDKT------KLIYLTYPNNPTGSTA 198 (404)
T ss_dssp ---TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCTT-TCCCCGGGSCHHHHHHE------EEEEECSSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCcc-cCcCCHHHHHHhhccCc------eEEEEcCCCCCCCccC
Confidence 456788888999999999999999 9999998863 47899999999997543 3677788999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC--CCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG--IERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g--~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~ 337 (499)
| +++|+++|+++|+++++|++|+.+.+.. .......- ....+.++.++||+++.| ..+|+++.++ +.. +.+
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l 275 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK-DMI-QAL 275 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH-HHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH-HHH-HHH
Confidence 5 7899999999999999999998764321 11111111 112467889999999744 4578887743 322 222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
.....+.. . ....+..+++...+ +.+.+++..++..++++++.+.|++. ++++.. +
T Consensus 276 ~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~ 333 (404)
T 2o1b_A 276 KKYQTHTN------------------A--GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-A 333 (404)
T ss_dssp HHHHHHHC------------------C--CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-C
T ss_pred HHHHhhcc------------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-C
Confidence 11100000 0 01233344444433 35667888888889999999999988 787764 4
Q ss_pred Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 416 HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 416 ~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
..+ .+++++.... ...++.++|. +.|+.+..+..+. +..++|++++ . ++++|+++++.|.++.+
T Consensus 334 ~~g~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~--~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 334 KGGIYVWLETPPGY---------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA-L--DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp CBSSEEEEECCTTC---------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC-S--CTTHHHHHHHHHHGGGG
T ss_pred CcceEEEEeCCCCC---------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc-C--CHHHHHHHHHHHHHHHH
Confidence 434 3556664210 0345666665 4575544433332 2467999996 3 67899999999987754
Q ss_pred H
Q 010842 492 R 492 (499)
Q Consensus 492 ~ 492 (499)
+
T Consensus 402 ~ 402 (404)
T 2o1b_A 402 L 402 (404)
T ss_dssp G
T ss_pred h
Confidence 3
No 122
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.89 E-value=6.1e-22 Score=204.23 Aligned_cols=316 Identities=12% Similarity=0.052 Sum_probs=188.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..+...++|+.+++++++++|.+.+.+ +..++++|||+||..++.+..+ ++..|+++...|.+..
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~-----------pGD~Vl~~~~~h~g~l 158 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGGHL 158 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC-----------SCEECCC---------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC-----------CCCEecccCccccccc
Confidence 345567999999999999999986410 0125667999999998887642 6788988887775421
Q ss_pred --------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842 203 --------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE 274 (499)
Q Consensus 203 --------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~ 274 (499)
+.+...|... .++.++++++ ++.+|+++|++++.+.. |.+|++..+ .+|.+.|+++|+++|++
T Consensus 159 ~h~~~~~~~~i~~~g~~~-~~~~~~vd~~-~~~iD~d~le~~l~~~~-----~klIi~~~s--~~~~~~dl~~i~~ia~~ 229 (490)
T 2a7v_A 159 THGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGTS--AYARLIDYARMREVCDE 229 (490)
T ss_dssp -----------------------CCBCTT-TCSBCHHHHHHHHHHHC-----CSEEEECCS--SCCSCCCHHHHHHHHHH
T ss_pred cchhhhcchhHHHcCCeE-EEEecccccc-cCCcCHHHHHHHHhhcC-----CcEEEEcCC--CCCCcccHHHHHHHHHH
Confidence 1334556511 2334445533 47999999999997531 335555443 34667899999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch-------------hHHHhhcCCc
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG-------------LLVKALSTDP 341 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~-------------~l~~~~~~~~ 341 (499)
||+++|+|+||+.+....+.....+ ..+|++++++||++++|.| |+++.++.. .+.+.+..
T Consensus 230 ~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~-- 303 (490)
T 2a7v_A 230 VKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINF-- 303 (490)
T ss_dssp TTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHH--
T ss_pred cCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHH--
Confidence 9999999999875543322211112 2589999999999988865 888887641 01111100
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceE
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFAL 419 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~ 419 (499)
.++. +.+++..... ..+..+++..-.+.++++.++..+++++|++.|++. |++++.+ ...++
T Consensus 304 -~~~~--------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~l 367 (490)
T 2a7v_A 304 -AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp -HHTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred -Hhcc--------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeE
Confidence 0010 0112211111 222334444333466888899999999999999986 8998753 45567
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~ 491 (499)
+.+.+.+.+ . ...++.+.|.+.|+.+-..+... ....+|+++ ++...+++|++++++.|.++..
T Consensus 368 v~vdl~~~g------~--~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 368 VLVDLRPKG------L--DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEEECTTTT------C--CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC------C--CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 777765432 0 13446666667775433221111 124699965 2344689999999999988775
Q ss_pred H
Q 010842 492 R 492 (499)
Q Consensus 492 ~ 492 (499)
.
T Consensus 440 ~ 440 (490)
T 2a7v_A 440 I 440 (490)
T ss_dssp H
T ss_pred h
Confidence 3
No 123
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.89 E-value=2.8e-21 Score=201.45 Aligned_cols=334 Identities=15% Similarity=0.084 Sum_probs=215.8
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCC
Q 010842 118 GFNWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSD 195 (499)
Q Consensus 118 ~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~ 195 (499)
...|..+.+...+++++.+|+.+..| ++.+. ...++|+|+++|+.+++.+..+. |. ++..|+++.
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-----~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~ 188 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADP-----DNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI 188 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCG-----GGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence 35677778888999999999999985 64221 25699999999998887765321 11 235899999
Q ss_pred CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHH
Q 010842 196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVA 272 (499)
Q Consensus 196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia 272 (499)
+.|.++..+++..|. .++.++++++++|.+|+++|++++++... +..+.+|+++.++||||.+ +++++|+++|
T Consensus 189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la 264 (498)
T 3ihj_A 189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264 (498)
T ss_dssp SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence 999999999999999 99999999876799999999999987532 2245678888999999999 5578899999
Q ss_pred HHhCCEEEeeccccchhccCc-c---chhhhcCC-----CCCce-eEeccccccc--CCCcceEEEE--eCchhHHHhhc
Q 010842 273 NEYGIWVHVDAAYAGSACICP-E---FRHYLNGI-----ERVDS-FSFSPHKWLL--SYLDCCCLWV--KQPGLLVKALS 338 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~-~---~~~~~~g~-----~~aDs-i~~~~hK~l~--~p~~~g~l~~--r~~~~l~~~~~ 338 (499)
++||+++++|.+|+.+.+... . .......+ ..... +..+.+|.+. ....+|++.+ .++... +.+.
T Consensus 265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~-~~l~ 343 (498)
T 3ihj_A 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIK-GQLV 343 (498)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHH-HHHH
T ss_pred HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHH-HHHH
Confidence 999999999999987654211 1 11111111 11223 4558899984 3456788775 444332 2221
Q ss_pred CC-ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 339 TD-PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 339 ~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
.. ..++. ...+..++....+. .+..+++.++..++++++.+.|++
T Consensus 344 ~~~~~~~~----------------------~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 401 (498)
T 3ihj_A 344 KLLSVRLC----------------------PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ 401 (498)
T ss_dssp HHHHHSCC----------------------CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccCC----------------------CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 01110 01233333333331 122345667788899999999999
Q ss_pred CCCeEEEcCCCceEEEE-EecCCCCCCc--chhHHHHHH--HHHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHH
Q 010842 406 DPRFEIVVPRHFALVCF-RLNPYPHSGS--ADTEMLNRK--LLDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDER 477 (499)
Q Consensus 406 ~~~~~~~~~~~~~~v~f-~~~~~~~~~~--~~~~~~~~~--l~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~ 477 (499)
+|++++. +|..+++.| ++..+..... ...+..... +.+.|.+.|+.+..+..+ .+..++|+++. .+++
T Consensus 402 ~~g~~~~-~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~e 477 (498)
T 3ihj_A 402 VPGIHCN-PLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPVE 477 (498)
T ss_dssp STTEECC-CCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCHH
T ss_pred CCCcEec-CCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCHH
Confidence 9999876 555555555 4432100000 000000122 234455678766654443 34568999994 6899
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 010842 478 HVVAAWELIMEGADRLFK 495 (499)
Q Consensus 478 di~~l~~~l~~~~~~l~~ 495 (499)
++++++++|.++.+++.+
T Consensus 478 ~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 478 KLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887754
No 124
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.89 E-value=6.5e-22 Score=200.62 Aligned_cols=287 Identities=16% Similarity=0.175 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH--
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC-- 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~-- 205 (499)
.....++.+++++++|.+. .+++++||+|+..++.+... ++..|+++...|.++...+
T Consensus 63 ~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 122 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGEA---------GLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLSH 122 (398)
T ss_dssp CHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHH
Confidence 4455666677999999863 37888899999988887632 4567888999999988876
Q ss_pred --HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842 206 --KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 206 --~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
+..|. +++.+|.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 123 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 186 (398)
T 2rfv_A 123 SMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDN 186 (398)
T ss_dssp HHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 77888 88888863 789999888643 4588889999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
+|+.+....+ ... .+|+++.++||+++.|.+ +|+++.+++. +...+........
T Consensus 187 ~~~~~~~~~~----~~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~~~-~~~~~~~~~~~~~---------------- 242 (398)
T 2rfv_A 187 TFMSPYCQQP----LQL---GADIVVHSVTKYINGHGDVIGGIIVGKQEF-IDQARFVGLKDIT---------------- 242 (398)
T ss_dssp TTTCTTTCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHTHHHHTT----------------
T ss_pred CCcccccCCc----hhh---CCcEEEEeCcccccCCCCceEEEEEECHHH-HHHHHHHHHHhCC----------------
Confidence 9986644221 111 389999999999988876 6888877542 2211111000000
Q ss_pred cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--------------cC---CCceEEEEEe
Q 010842 362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--------------VP---RHFALVCFRL 424 (499)
Q Consensus 362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--------------~~---~~~~~v~f~~ 424 (499)
+-....+..|+.++.+ +.+..++++..++++.+.+.|++.+.++-+ .+ ...++++|.+
T Consensus 243 ---~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 317 (398)
T 2rfv_A 243 ---GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI 317 (398)
T ss_dssp ---CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred ---CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 0011345566666655 345566677777888888888876543322 11 2467888877
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-e---------------------ECC--EEEEEEeccCCCCcHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-I---------------------VGG--LYMLRFAVGASLTDERHVV 480 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~---------------------~~g--~~~lRi~~~~~~~t~~di~ 480 (499)
.+. .....++.+++...|.. ++.+ . ..| ..++|++++ ..+++++|+
T Consensus 318 ~~~--------~~~~~~l~~~~~~~~i~-~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~~~~~i~ 387 (398)
T 2rfv_A 318 AGG--------LEAGRRMINSVELCLLA-VSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVG-LEDPEDIIN 387 (398)
T ss_dssp TTH--------HHHHHHHHTTCSSSEEC-SCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECC-SSCHHHHHH
T ss_pred cCC--------HHHHHHHHHhCCcceec-cCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEec-CCCHHHHHH
Confidence 531 12234455544333321 1111 0 012 468999996 788999999
Q ss_pred HHHHHHHHH
Q 010842 481 AAWELIMEG 489 (499)
Q Consensus 481 ~l~~~l~~~ 489 (499)
+++++|+++
T Consensus 388 ~l~~al~~~ 396 (398)
T 2rfv_A 388 DLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998764
No 125
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.89 E-value=1.3e-21 Score=196.69 Aligned_cols=311 Identities=9% Similarity=0.045 Sum_probs=203.0
Q ss_pred ChhhHHHHHHHHHHH-HHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 124 SPASTELEIVVMDWL-ATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 124 ~p~~~~lE~~~~~~l-a~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
+|...++|++ + ++++|... ..++++|||+|+..++.+..-. ++..|+++..+|.++.
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~~--------~~v~~~sgt~al~~al~~l~~~----------~Gd~Vi~~~~~~~~~~ 92 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNRG--------AVTTVANATLGLMAAIQLKKRK----------KGKYALMPSFTFPATP 92 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTCS--------EEEEESCHHHHHHHHHHHHSCT----------TCCEEEEESSSCTHHH
T ss_pred CHHHHHHHHH----HHHHHhCCCC--------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHH
Confidence 6777888887 7 88888322 2499999999999888765111 5778999999999999
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHH-HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV-EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i-~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.++...|+ +++.++++++ +|.+|+++|++++ +++. ++.+|+ +++++|.+.|+++|+++|+ +|+++|+
T Consensus 93 ~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~ 160 (377)
T 3ju7_A 93 LAAIWCGL---EPYFIDISID-DWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVV 160 (377)
T ss_dssp HHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEE
T ss_pred HHHHHcCC---EEEEEecCCc-cCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEEE
Confidence 99999999 9999999854 5899999999998 4430 122444 5668999999999999999 9999999
Q ss_pred eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
|++|+.+..... +........++.+++++||++++ ...|++++++++...+...... +-... .+....
T Consensus 161 D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~-~g~~~--------~~~~~~ 228 (377)
T 3ju7_A 161 DAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGN-FGFDT--------NRECTM 228 (377)
T ss_dssp ECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTB-TTBCT--------TSCBCS
T ss_pred ECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHh-cCCCC--------CCceee
Confidence 999975543211 11101122356677778999987 4677777777653322211110 00000 000001
Q ss_pred cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EcCC----Cc-eEEEEEecCCCCCCcchh
Q 010842 362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI-VVPR----HF-ALVCFRLNPYPHSGSADT 435 (499)
Q Consensus 362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~----~~-~~v~f~~~~~~~~~~~~~ 435 (499)
.....+...+..++.+..+ +.+++++++..++++++.+.|++++++.+ +.++ .. ..+.++.....
T Consensus 229 ~g~~~~~~~~~aa~~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 299 (377)
T 3ju7_A 229 MGFNCKMSEYAAAIGIATM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------- 299 (377)
T ss_dssp SCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS-------
T ss_pred ccccCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh-------
Confidence 1122233455555555544 78889999999999999999998875421 1111 11 12344443210
Q ss_pred HHHHHHHHHHHHhcCCEEEEee--e------EC-------------CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 436 EMLNRKLLDWVNSTGRVYLTHT--I------VG-------------GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 436 ~~~~~~l~~~l~~~g~~~~~~~--~------~~-------------g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
..+++.+.|.++|+..-.+. . +. ....+|+.+ ++.+|++|++++++.|+++...
T Consensus 300 --~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 300 --RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-WEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp --CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHTC----
T ss_pred --hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-CCCCCHHHHHHHHHHHHHHHhc
Confidence 14678888888886332211 1 01 135799998 6999999999999999877653
No 126
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.89 E-value=1.1e-21 Score=198.83 Aligned_cols=286 Identities=15% Similarity=0.112 Sum_probs=194.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+ .+++++|.+. .+++++||+|+..++.+... ++..|+++...|.++.
T Consensus 63 ~~~~~~~l~~----~la~~~g~~~---------~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~ 118 (398)
T 1gc0_A 63 SNPTLNLLEA----RMASLEGGEA---------GLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTF 118 (398)
T ss_dssp CCHHHHHHHH----HHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHH
T ss_pred CChHHHHHHH----HHHHHhCCCc---------EEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHH
Confidence 3344444554 5888888763 37888889999988887632 4567888999999987
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+ ...|+ +++.++.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 182 (398)
T 1gc0_A 119 AFLHHGIGEFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGAT 182 (398)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCE
Confidence 776 55677 88888753 889999988653 45888899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+|+|++|+.+....+. .. .+|.++.+.||+++.|.+ +|+++.+++. +.+.+.....++.
T Consensus 183 li~D~~~~~~~~~~~~----~~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~----------- 243 (398)
T 1gc0_A 183 VVVDNTYCTPYLQRPL----EL---GADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMT----------- 243 (398)
T ss_dssp EEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHT-----------
T ss_pred EEEECCCcccccCCch----hh---CceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccC-----------
Confidence 9999999876543221 11 389999999999998876 6888776542 2212211111100
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--------------cC---CCceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--------------VP---RHFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--------------~~---~~~~~ 419 (499)
+.....+..|+.++.+ +.+..+.++..++++++.+.|+++|.++-+ .+ ...++
T Consensus 244 --------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~ 313 (398)
T 1gc0_A 244 --------GAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGM 313 (398)
T ss_dssp --------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTE
T ss_pred --------CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceE
Confidence 1111345566666554 556777888888899999999887665421 11 24677
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---e---------ee------------ECC--EEEEEEeccCCC
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---H---------TI------------VGG--LYMLRFAVGASL 473 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~---------~~------------~~g--~~~lRi~~~~~~ 473 (499)
++|.+.+. . ....+.+.+.+..... + .. ..| ..++|+++. ..
T Consensus 314 ~~~~l~~~--------~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g-~~ 381 (398)
T 1gc0_A 314 IAFELKGG--------I---GAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVG-LE 381 (398)
T ss_dssp EEEEETTH--------H---HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECC-SS
T ss_pred EEEEECCC--------H---HHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeC-cC
Confidence 88877531 1 2223333334433222 1 00 011 368999996 78
Q ss_pred CcHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEG 489 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~ 489 (499)
+++++|+.+.++|+++
T Consensus 382 ~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 382 DIDDLLADVQQALKAS 397 (398)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 8999999999998865
No 127
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=4.4e-21 Score=192.00 Aligned_cols=312 Identities=11% Similarity=0.012 Sum_probs=205.4
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+.. ...|. .+...+++++ +++++|.+.+ ..++|+|||+|+..++.+. .
T Consensus 41 ~v~~a~~~~~~~-~~~y~-~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~-------- 97 (364)
T 1lc5_A 41 SVKRALIDNLDC-IERYP-DADYFHLHQA----LARHHQVPAS-------WILAGNGETESIFTVASGL--K-------- 97 (364)
T ss_dssp HHHHHHHHTGGG-GGSCC-CTTCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C--------
T ss_pred HHHHHHHHHHHH-hhcCC-CCCHHHHHHH----HHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C--------
Confidence 345555555532 22342 2345566665 6777787644 3589999999998887766 1
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
+ ..|++...+|.++..+++..|. +++.+|.+.++++.+ ++++.+.+.+ .+.+|+++.++|++|.+-|
T Consensus 98 --g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~ 164 (364)
T 1lc5_A 98 --P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPE 164 (364)
T ss_dssp --C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCC
T ss_pred --C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCC
Confidence 2 4577788899999999999999 999999875332443 3434333321 2346777899999999988
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST- 339 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~- 339 (499)
+++|+++|++||+++++|++|+.+........... +....+.++.+.||+++.| ..+|++++.+++.. +.+..
T Consensus 165 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~~l~~~ 242 (364)
T 1lc5_A 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAM-ARMRRQ 242 (364)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHH-HHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHH-HHHHHh
Confidence 89999999999999999999987643111111111 1123678889999999755 45788883344333 22211
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 418 (499)
...| ....+..+++...+.. +.+++..++..++++++.+.|++.|++++. ++..+
T Consensus 243 ~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~ 298 (364)
T 1lc5_A 243 QMPW-----------------------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRAN 298 (364)
T ss_dssp SCTT-----------------------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSS
T ss_pred CCCC-----------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCe
Confidence 1000 1134555555555532 457778888888999999999998899876 45556
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.+.+... ..++.+.|.++|+.+..+..+. +..++|++++ +.+|+++++++|+++.+++
T Consensus 299 ~~~~~~~~~-----------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 299 YLLLRCERE-----------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp EEEEEESCT-----------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC---
T ss_pred EEEEECCCc-----------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhcc
Confidence 677766431 2346777777885544433332 2468999984 5889999999999887654
No 128
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.88 E-value=3.7e-21 Score=195.35 Aligned_cols=282 Identities=15% Similarity=0.176 Sum_probs=196.0
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH----HHHHh
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK----VCKLA 208 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k----a~~~~ 208 (499)
++.+.+++++|.+. .++++||++|+..++.+..+ ++..|+++...|.++.. .++..
T Consensus 66 ~l~~~ia~~~g~~~---------~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~ 125 (404)
T 1e5e_A 66 NLEGKIAFLEKTEA---------CVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHALTKF 125 (404)
T ss_dssp HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHhCCCc---------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHHHHc
Confidence 34445888888763 38888999998888776532 46678889999999888 78888
Q ss_pred CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccc
Q 010842 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAG 287 (499)
Q Consensus 209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~ 287 (499)
|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++ +|+++++|++|+.
T Consensus 126 g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~ 189 (404)
T 1e5e_A 126 GI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS 189 (404)
T ss_dssp TC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred CC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence 99 99998864 678898888653 3478899999999999999999999999 9999999999987
Q ss_pred hhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
+....+. .. ++|.++.++||+++.|.+ +|+++.+++. +.+.+.....++. +
T Consensus 190 ~~~~~~~----~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~~-~~~~l~~~~~~~~-------------------g 242 (404)
T 1e5e_A 190 PMITNPV----DF---GVDVVVHSATKYINGHTDVVAGLICGKADL-LQQIRMVGIKDIT-------------------G 242 (404)
T ss_dssp TTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHTCCCCCC-------------------C
T ss_pred hhhCCcc----cc---CCEEEEEcCccccCCCCCCeEEEEEECHHH-HHHHHHHHHHhCC-------------------C
Confidence 6543221 11 489999999999998876 6888887643 3212322111110 0
Q ss_pred CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC------------C----CceEEEEEecCCC
Q 010842 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP------------R----HFALVCFRLNPYP 428 (499)
Q Consensus 366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~------------~----~~~~v~f~~~~~~ 428 (499)
.....+..|+++..+ +.+..++++..++++.+.+.+++.+.+. ++.+ + ..++++|.+..
T Consensus 243 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~-- 318 (404)
T 1e5e_A 243 SVISPHDAWLITRGL--STLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS-- 318 (404)
T ss_dssp CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--
T ss_pred CCCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--
Confidence 112345667776665 3456677777888888888888876553 2211 1 26778887643
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------------------CC--EEEEEEeccCCCCcHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-------------------------GG--LYMLRFAVGASLTDERHVVA 481 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------------~g--~~~lRi~~~~~~~t~~di~~ 481 (499)
. ...+.+.+.+.|. +..+..+ .| ..++|++++. +|+++
T Consensus 319 -------~--~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-----e~~~~ 383 (404)
T 1e5e_A 319 -------G--FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-----EDADE 383 (404)
T ss_dssp -------H--HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-----SCHHH
T ss_pred -------C--HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-----CCHHH
Confidence 1 1223344445565 3332211 12 4689999962 78999
Q ss_pred HHHHHHHHHHHHhcc
Q 010842 482 AWELIMEGADRLFKG 496 (499)
Q Consensus 482 l~~~l~~~~~~l~~~ 496 (499)
+++.|+++.+.+++.
T Consensus 384 li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 384 LIADFKQGLDALLRS 398 (404)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998877653
No 129
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.88 E-value=4.3e-21 Score=192.78 Aligned_cols=317 Identities=11% Similarity=0.014 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842 103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~ 182 (499)
|..+.+.+...+. ....|....+..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 38 ~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~~~~------- 104 (376)
T 3ezs_A 38 PKFIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELKE-----NELISTLGSREVLFNFPSFVLF------- 104 (376)
T ss_dssp CHHHHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCG-----GGEEEESSSHHHHHHHHHHHTT-------
T ss_pred CHHHHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEECcCcHHHHHHHHHHHcC-------
Confidence 3445555555442 23345544567899999999999999973111 1469999999999888877642
Q ss_pred hhccC--CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 183 AENMH--KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 183 ~~g~~--~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
+ +..|+++..+|.++...++..|. +++.+|.++++ .+++ +|++++.++++ +|+++.++|++|
T Consensus 105 ----~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~~------~v~~~~p~nptG 168 (376)
T 3ezs_A 105 ----DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEVD------LVILNSPNNPTG 168 (376)
T ss_dssp ----TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHCS------EEEECSSCTTTC
T ss_pred ----CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCCC------EEEEcCCCCCcC
Confidence 4 56788899999999999999999 99999998654 3444 77777776543 677789999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC-------CCCCceeEeccccccc-CCCcceEEEEeC
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG-------IERVDSFSFSPHKWLL-SYLDCCCLWVKQ 329 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g-------~~~aDsi~~~~hK~l~-~p~~~g~l~~r~ 329 (499)
.+-| +++|+++|++||+++++|++|+.+.... ........ ....+.+..+.+|+++ ....+|+++.+.
T Consensus 169 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 247 (376)
T 3ezs_A 169 RTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS 247 (376)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH
Confidence 9966 6777888999999999999998764422 11111110 1246788899999996 446678877643
Q ss_pred chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842 330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR 408 (499)
Q Consensus 330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~ 408 (499)
+.. +.+.....+. +.....+..+++...+. .+.+++..++..++++++.+.|+ +
T Consensus 248 -~~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~ 302 (376)
T 3ezs_A 248 -RLL-EKYKAFRAYL--------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---N 302 (376)
T ss_dssp -HHH-HHHHHHHTTT--------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---T
T ss_pred -HHH-HHHHHHHhhh--------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---C
Confidence 322 2221110000 00112333344333332 34577888888888999998887 4
Q ss_pred eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHH
Q 010842 409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~ 483 (499)
+. .+.....+.+.+. . ..++.++|.+ .|+.+..+..+. +..++|++++ .|+++|++++
T Consensus 303 ~~--~~~~~~~~~~~~~--~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~---~~~~~i~~~l 365 (376)
T 3ezs_A 303 TL--IYPYSFYVYLPVQ--N----------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV---YDTPLLEKPL 365 (376)
T ss_dssp CC--CCSBSSEEEEECS--C----------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC---SCHHHHHHHH
T ss_pred CC--CCCcceEEEEECC--C----------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc---CCHHHHHHHH
Confidence 54 2334445555554 1 3566777776 687655443332 4578999986 3899999999
Q ss_pred HHHHHHHH
Q 010842 484 ELIMEGAD 491 (499)
Q Consensus 484 ~~l~~~~~ 491 (499)
++|.++.+
T Consensus 366 ~~l~~~l~ 373 (376)
T 3ezs_A 366 EIIETYRE 373 (376)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99998764
No 130
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.88 E-value=9.5e-22 Score=196.64 Aligned_cols=306 Identities=13% Similarity=0.014 Sum_probs=196.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCcc-EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGG-GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-- 200 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~-g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-- 200 (499)
+|...++.+++.+++++++|.+++. . .++|+|||+|+..++.+..+ ++..|++....|++
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~------~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~ 106 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASK 106 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc------EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHH
Confidence 5666777888999999999997521 2 35779999999888776532 44556655556666
Q ss_pred HHHHHHHhCCCCCCeEEeeCCC--CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCC
Q 010842 201 FAKVCKLAGVSPANIRALPTSV--DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGI 277 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~ 277 (499)
+...++..| +++.||++. +.+..+|.++++ +++ .+.+|++++++|+||.+ .|+++| +|+
T Consensus 107 ~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~ 168 (362)
T 2c0r_A 107 ALKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSV 168 (362)
T ss_dssp HHHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTS
T ss_pred HHHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCC
Confidence 335555554 477788762 111235666553 322 35589999999999995 899987 899
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
|+|+|++|+.+.... .+...|++++++|||++ |.|+|+++++++. . +.+....+++.+.. ...
T Consensus 169 ~vivD~a~~~~~~~~--------~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~-~-~~l~~~~~~~~~~~----~~~-- 231 (362)
T 2c0r_A 169 PLIGDMSSDILSRPF--------DLNQFGLVYAGAQKNLG-PSGVTVVIVREDL-V-AESPKHLPTMLRYD----TYV-- 231 (362)
T ss_dssp CEEEECTTTTTSSCC--------CGGGCSEEEEETTTTTC-CSSCEEEEEEGGG-S-SSCCTTSCGGGCHH----HHH--
T ss_pred EEEEEChhhccCCcc--------chhHCcEEEEecccccc-CcCcEEEEEcHHH-H-hhccccCchHHhHH----HHh--
Confidence 999999997654321 12235999999999997 7789999997642 1 11111101111000 000
Q ss_pred CCcccCCCCC-CCcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEEcCC---CceEEEEEecCCCCCC
Q 010842 358 KDWQVGTGRR-FKSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRF-EIVVPR---HFALVCFRLNPYPHSG 431 (499)
Q Consensus 358 ~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~---~~~~v~f~~~~~~~~~ 431 (499)
......++.. .....+..+++.+... +++++.++..++++++.+.|++++++ ++..++ ...+++|.+..
T Consensus 232 ~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 306 (362)
T 2c0r_A 232 KNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS----- 306 (362)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-----
T ss_pred hccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-----
Confidence 0000001111 1123445555554444 78999999999999999999998646 775432 34567776642
Q ss_pred cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.....++.+.|.++|+++..+... ..++|++++ ..++++|+++++++|+++.++.
T Consensus 307 ----~~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~-~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 307 ----EELEKEFVKASEQEGFVGLKGHRS--VGGLRASIY-NAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp ----HHHHHHHHHHHHHTTEESCBCCTT--TCSEEEECC-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----cchHHHHHHHHHHCCCeeccCCCC--CCEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 123567788888888643322211 246999995 6788999999999999987653
No 131
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.88 E-value=3.4e-22 Score=198.59 Aligned_cols=304 Identities=15% Similarity=0.139 Sum_probs=190.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|...+...+++++ +++++|.+. .++++|||+|+..++.+..+ ++..|+++..+|.
T Consensus 33 ~y~~~~~~~~l~~~----la~~~g~~~---------~~~~~~gt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~ 88 (347)
T 1jg8_A 33 VYGEDPTINELERL----AAETFGKEA---------ALFVPSGTMGNQVSIMAHTQ-----------RGDEVILEADSHI 88 (347)
T ss_dssp GGTCCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCHH
T ss_pred ccCCChHHHHHHHH----HHHHhCCce---------EEEecCcHHHHHHHHHHhcC-----------CCCEEEEcCcchh
Confidence 45556666666655 888888754 38899999999887765422 5677888999998
Q ss_pred hHHH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccCC---hhHHHHHH
Q 010842 200 TFAK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVDN---VEPLAEVA 272 (499)
Q Consensus 200 s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id~---l~~I~~ia 272 (499)
+... .+...|+ +++.+ .++ ++.+|+++|+++|++....+.++.+|+.+.++|++ |.+-| +++|+++|
T Consensus 89 ~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a 162 (347)
T 1jg8_A 89 FWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIA 162 (347)
T ss_dssp HHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHH
T ss_pred hhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHH
Confidence 7543 5677888 88888 443 35799999999885310001135578889999999 99855 57889999
Q ss_pred HHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
++||+++|+|+||.-+.. .......+. ..+|++++++||+++.|. |.+++.+++...+...... ++..
T Consensus 163 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~-~~~~---- 232 (347)
T 1jg8_A 163 KEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAPV--GSVVVGDRDFIERARKARK-MLGG---- 232 (347)
T ss_dssp HHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHH-HHTC----
T ss_pred HHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCCc--eEEEEcCHHHHHHHHHHHH-HcCC----
Confidence 999999999998742211 111111111 247889999999998774 4444444433322111100 1100
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEecCCCC
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRLNPYPH 429 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~ 429 (499)
+.+..++..+++...+ +...+.+++..++++++.+.|++. ++++. .++..+++++++....
T Consensus 233 --------------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~- 294 (347)
T 1jg8_A 233 --------------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLK- 294 (347)
T ss_dssp --------------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSS-
T ss_pred --------------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccccc-
Confidence 0011223223332222 111122344456778888888877 67643 3455677777764211
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
. ...++.++|.++|+.+... +..++|+++ +..++++|+++++++|+++.+++
T Consensus 295 ---~----~~~~~~~~l~~~gi~v~~~----~~~~iRl~~-~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 295 ---V----NAHGFIEALRNSGVLANAV----SDTEIRLVT-HKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp ---S----CHHHHHHHHHHHTEECEEE----ETTEEEEEC-CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---C----CHHHHHHHHHHCCCEEecC----CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 0 1356777777778544322 134699998 47789999999999999987653
No 132
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=2.1e-21 Score=197.82 Aligned_cols=311 Identities=13% Similarity=0.045 Sum_probs=194.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842 122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF 201 (499)
Q Consensus 122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~ 201 (499)
...+....+|+.+.+++++++|.+.+. +++++||+|+..++.+..+ ++..|+++..+|.++
T Consensus 64 ~~~~~~~~~~~~~~~~la~~~g~~~~~--------i~~~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~ 124 (417)
T 3n0l_A 64 GGCEFVDEIETLAIERCKKLFNCKFAN--------VQPNSGSQANQGVYAALIN-----------PGDKILGMDLSHGGH 124 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHSC-----------TTCEEEEECC-----
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCcc--------eEeccHHHHHHHHHHHhcC-----------CCCEEEecccccccc
Confidence 344566789999999999999986542 5556669999988877632 567788898999876
Q ss_pred HH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 202 AK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 202 ~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
.. .+...|.+. .++.++++ .++.+|+++|++++++.. +.+|+.+.++ +|.+.|+++|.++|++||++
T Consensus 125 ~~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~ 194 (417)
T 3n0l_A 125 LTHGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAY 194 (417)
T ss_dssp -----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCE
T ss_pred cchhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCE
Confidence 55 344445411 34555555 346899999999997431 2366666655 39999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 358 (499)
+|+|++|+.+......... .+..+|++++++||++.+|. +|+++.+++...............
T Consensus 195 li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~------------- 257 (417)
T 3n0l_A 195 LFADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAKKINSAIFPGIQ------------- 257 (417)
T ss_dssp EEEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCS-CEEEEESCHHHHHHHHHHHTTTTC-------------
T ss_pred EEEECccchhhhhcccCCC---ccccceEEEeeCccccCCCC-eeEEEECCHHHHHHHhhhhCCccc-------------
Confidence 9999997654433222111 12247999999999997776 488887754433221111000000
Q ss_pred CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhH
Q 010842 359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
++... ....+..++.....++++++.++..++++++.+.|++ ++++++.. ...+.+.+.+.+.+
T Consensus 258 -----~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~-------- 323 (417)
T 3n0l_A 258 -----GGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDRE-------- 323 (417)
T ss_dssp -----SSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSS--------
T ss_pred -----CCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCC--------
Confidence 01000 1123344454444567889999999999999999998 58887652 34455666654321
Q ss_pred HHHHHHHHHHHhcCCEEEEeee------ECCEEEEEEecc---CCCCcHHHHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTI------VGGLYMLRFAVG---ASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.....+.+.|.+.|+.+..... ......+|+++. ....++++|++++++|.++.++
T Consensus 324 ~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 324 FSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp SCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 0134556666677854322111 112245899863 1235689999999999988754
No 133
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.88 E-value=1.4e-21 Score=194.90 Aligned_cols=331 Identities=12% Similarity=0.021 Sum_probs=206.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842 89 SPNFFAFFPATVSTAGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL 167 (499)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~ 167 (499)
+..|+|.-+. +..+..+.+++.... ......|...|...++|+. +++++|.+.. ++++|||+|+.
T Consensus 11 ~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~~~~~~---------i~~~~G~~a~~ 76 (357)
T 3lws_A 11 QTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQK----FADVLGMDDA---------VFFPSGTMAQQ 76 (357)
T ss_dssp TCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHH----HHHHHTCSEE---------EEESCHHHHHH
T ss_pred hhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHHHH----HHHHhCCCcE---------EEecCcHHHHH
Confidence 4456666544 345555555554321 1112344445666666655 8888887543 77799999999
Q ss_pred HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
.++.+..... ++.+|+++...|++... .+...|. +++.+|.+ ++.+|+++|+++.+
T Consensus 77 ~al~~~~~~g---------d~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~------ 135 (357)
T 3lws_A 77 VALRIWSDET---------DNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD------ 135 (357)
T ss_dssp HHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS------
T ss_pred HHHHHHhhcC---------CCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC------
Confidence 8888765431 22267788888887655 3456677 88888743 35899999998721
Q ss_pred CccEEEEEecCCCcc-cccCC---hhHHHHHHHHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccC
Q 010842 245 LVPLFLCATVGTTST-TAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLS 318 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~-G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 318 (499)
+.+|+++.++|++ |.+.+ +++|+++|++||+|+|+|+||+.... ......... ..+|+++.++||+++.
T Consensus 136 --~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~ 210 (357)
T 3lws_A 136 --IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGG 210 (357)
T ss_dssp --CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCC
T ss_pred --cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCC
Confidence 2368888888888 88764 89999999999999999999862211 111111222 3478999999999977
Q ss_pred CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
|.+ |+++. +++.......... .+... .+.......+++..+ +...+.+++..+++++
T Consensus 211 ~~g-g~~~~-~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~ 267 (357)
T 3lws_A 211 IAG-AILAG-PAAFCQTARIWKR-RYGGD------------------LISLYPYIVSADYYY--ELRKDRMGQYYEQAKQ 267 (357)
T ss_dssp SSC-EEEEE-CHHHHHHHHHHHH-HTTCC------------------CSCCHHHHHHHHHHH--HHHTTCHHHHHHHHHH
T ss_pred Cce-EEEEc-CHHHHHHHHHHHH-HhcCC------------------cccchHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 877 66655 4433322111110 00000 000111111122222 2233445556788899
Q ss_pred HHHHHhcCCCeEEE-cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-CCEEEEEEeccCC--CC
Q 010842 399 FEGFVKSDPRFEIV-VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-GGLYMLRFAVGAS--LT 474 (499)
Q Consensus 399 l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lRi~~~~~--~~ 474 (499)
+.+.|+++|++++. .++..+.+++++.... .....++.+.|.++|+.+..+... .+..++|+++... ..
T Consensus 268 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~ 340 (357)
T 3lws_A 268 LAEQFNALPGVHTTPEVPVSNMFHLHFDGQA-------ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGEL 340 (357)
T ss_dssp HHHHHHTSTTEEEESSSCSSSEEEEEEESCH-------HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGS
T ss_pred HHHHHHhCCCCeeccCCCcceEEEEEecCCh-------HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhc
Confidence 99999999999985 4667788888775421 122456777888888544332222 4667899988533 35
Q ss_pred cHHHHHHHHHHHHHH
Q 010842 475 DERHVVAAWELIMEG 489 (499)
Q Consensus 475 t~~di~~l~~~l~~~ 489 (499)
+++++++.++.|.+.
T Consensus 341 ~~~~l~~al~~l~~a 355 (357)
T 3lws_A 341 DQQTRDAGFARLRQA 355 (357)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 788899888888765
No 134
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.88 E-value=2.5e-21 Score=195.84 Aligned_cols=285 Identities=15% Similarity=0.096 Sum_probs=197.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+. .++++|||+|+..++.+... ++..|+++...|.+..
T Consensus 64 ~~~~~~~l~~~----la~~~g~~~---------~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~ 119 (392)
T 3qhx_A 64 GNPTRTALEAA----LAAVEDAAF---------GRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTF 119 (392)
T ss_dssp CCHHHHHHHHH----HHHHTTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred CChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 34554555554 889998764 38999999999988876632 4567888999998877
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
..+ ...|+ +++.+|.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||++
T Consensus 120 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~ 183 (392)
T 3qhx_A 120 RLIDKVFTGWNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAK 183 (392)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCE
T ss_pred HHHHHHHHhcCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCE
Confidence 666 55688 88888764 899999998754 34788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+|+|++|+.+....+. .. .+|.++.+.||+++.+.+ +|+++.+++.... .+....
T Consensus 184 li~D~~~~~~~~~~~~----~~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~--------------- 240 (392)
T 3qhx_A 184 VLVDNTFASPALQQPL----SL---GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQ--------------- 240 (392)
T ss_dssp EEEECTTTCTTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHH---------------
T ss_pred EEEECCCcccccCChH----Hh---CCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHH---------------
Confidence 9999999865332221 11 389999999999997743 7888877654332 211100
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------ceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------FAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~ 419 (499)
...+.....+..|+.++.+ +.+..++++..++++++.+.|++.|.+..+..|. ..+
T Consensus 241 -----~~~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~ 313 (392)
T 3qhx_A 241 -----NGAGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGM 313 (392)
T ss_dssp -----HHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred -----HhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceE
Confidence 0112233456777777654 5577788889999999999999999886543221 457
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---------EEeeeE-----------CCEEEEEEeccCCCCcHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---------LTHTIV-----------GGLYMLRFAVGASLTDERHV 479 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---------~~~~~~-----------~g~~~lRi~~~~~~~t~~di 479 (499)
++|.+.+. ....+++.+.+...|... ..+... -....+|+|++ ..+++++|
T Consensus 314 ~~~~l~~~--------~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e~~~~~i 384 (392)
T 3qhx_A 314 VSVRMRAG--------RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG-IEDVADLL 384 (392)
T ss_dssp EEEEETTC--------HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECC-SSCHHHHH
T ss_pred EEEEeCCc--------HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEec-cCCHHHHH
Confidence 88888652 233556666665443211 111100 12356999996 66777777
Q ss_pred HHHHHHH
Q 010842 480 VAAWELI 486 (499)
Q Consensus 480 ~~l~~~l 486 (499)
+.+.++|
T Consensus 385 ~~l~~al 391 (392)
T 3qhx_A 385 DDLKQAL 391 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777665
No 135
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=2e-22 Score=201.14 Aligned_cols=333 Identities=13% Similarity=0.006 Sum_probs=209.5
Q ss_pred CCCChHHHHHHHHHHHccc----CCccccc---ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh-HHHHHHH
Q 010842 98 ATVSTAGFLGEMLCACFNS----VGFNWLA---SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT-SDSILVT 169 (499)
Q Consensus 98 ~~~~~~~~~~~~l~~~~n~----~~~~~~~---~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg-t~A~~~a 169 (499)
++..+|..+.+.+...+.. ....|.. ++....+..++.+++++++|.+.. ...++|+|+ |+|+..+
T Consensus 10 g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~------~~v~~~~g~gt~al~~~ 83 (360)
T 1w23_A 10 GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND------YQILFLQGGASLQFTML 83 (360)
T ss_dssp SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC------ceEEEECCcchHHHHHH
Confidence 3334444555555555532 1222333 667777888899999999999632 135888888 8998877
Q ss_pred HHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH-HHHHHHHcCCccE
Q 010842 170 LIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR-AVEADVEAGLVPL 248 (499)
Q Consensus 170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~~~g~~p~ 248 (499)
+.+.... |.++.+|+++..+|++... ++. .| +++.||++++. +.+|+++|++ +++++ +.
T Consensus 84 ~~~l~~~--------~~~g~~vi~~~~~~~~~~~-~~~--~g--~~~~v~~~~~~-~~~d~~~l~~~~i~~~------~k 143 (360)
T 1w23_A 84 PMNLLTK--------GTIGNYVLTGSWSEKALKE-AKL--LG--ETHIAASTKAN-SYQSIPDFSEFQLNEN------DA 143 (360)
T ss_dssp HHHHCCT--------TCEEEEEECSHHHHHHHHH-HHT--TS--EEEEEEECGGG-TSCSCCCGGGCCCCTT------EE
T ss_pred HHHhcCC--------CCcccEEEecchhHHHHHH-HHH--hC--CeEEeeccccc-CcCCccchHhhccCCC------CC
Confidence 7655321 1135578888778877433 333 34 58889987521 3589999988 77432 45
Q ss_pred EEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842 249 FLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK 328 (499)
Q Consensus 249 ~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r 328 (499)
+|++++++|+||.+-| + |+++||+++++|++|+.+....+ +...|++++++||+++ |.|+|+++++
T Consensus 144 ~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~--------~~~~di~~~s~sK~~~-~~G~G~~~~~ 209 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLK--------VNQFGMIYAGAQKNLG-PSGVTVVIVK 209 (360)
T ss_dssp EEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTS-CTTCEEEEEE
T ss_pred EEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcC--------cccCCEEEEEcccccC-CCCcEEEEEc
Confidence 7888999999999854 2 23389999999999987643211 1123899999999887 6689999987
Q ss_pred CchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccC-CCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHh
Q 010842 329 QPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVG-TGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 329 ~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~ 404 (499)
++. + +.+.. .+.++... ........ .+... ....+..++..+... +++++.++..++++++.+.|+
T Consensus 210 ~~~-~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 279 (360)
T 1w23_A 210 KDL-L-NTKVEQVPTMLQYA--------THIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTID 279 (360)
T ss_dssp HHH-H-CSCCTTCCGGGCHH--------HHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-H-hhcccCCcchhhhh--------hhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 542 1 21211 11111000 00000000 11111 112344455554444 788999999999999999999
Q ss_pred cCCCe-EEEcCC--Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHH
Q 010842 405 SDPRF-EIVVPR--HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVV 480 (499)
Q Consensus 405 ~~~~~-~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~ 480 (499)
+++++ ....++ ..+ +++|++.+ .....++.++|.++|+.+..+.. ...++|+++. ..+++++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~-~~~~~~~i~ 347 (360)
T 1w23_A 280 ESNGFYVGHAEKGSRSLMNVTFNLRN---------EELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIY-NAVPIDACI 347 (360)
T ss_dssp TTTTSSEESSCGGGBCSSEEEEECSS---------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECC-TTSCHHHHH
T ss_pred HccCcccccCCchhccCcEEEEEcCC---------CccHHHHHHHHHHCCeeeecCCC--CCCeEEEEec-CCCCHHHHH
Confidence 98765 554222 234 67777643 12245677778888854422211 1357999995 778999999
Q ss_pred HHHHHHHHHHHH
Q 010842 481 AAWELIMEGADR 492 (499)
Q Consensus 481 ~l~~~l~~~~~~ 492 (499)
+++++|+++.++
T Consensus 348 ~~~~~l~~~~~~ 359 (360)
T 1w23_A 348 ALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999987653
No 136
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.88 E-value=4.7e-21 Score=198.37 Aligned_cols=357 Identities=11% Similarity=0.088 Sum_probs=204.3
Q ss_pred cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTL 170 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al 170 (499)
.|+.+.++.+. +. +.+.+...+......|...+...+++++ +++++|.+. .++|+|||+|+..++
T Consensus 44 ~ylD~~~~~~~-~~-v~~a~~~~~~~~~~~y~~~~~~~~l~~~----la~~~~~~~---------v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 44 VYIDLLTDSGT-NA-MSDHQWAAMITGDEAYAGSRNYYDLKDK----AKELFNYDY---------IIPAHQGRGAENILF 108 (467)
T ss_dssp CSEECSCSSSC-CC-EEHHHHHHHHTCCCCSSSCHHHHHHHHH----HHHHHCCCE---------EEEESSHHHHHHHHH
T ss_pred eeeecccCcCC-HH-HHHHHHHHHhhcccccccCccHHHHHHH----HHHHcCCCc---------EEEcCCcHHHHHHHH
Confidence 46666544433 22 2233333333323356556666666655 777777642 599999999999999
Q ss_pred HHHHHHHHhHhhhhccCCeEEEcCCCCc-hhHHHHHHHhCCCCCCeEEeeCCC----C----CCCccCHHHHHHHHHHHH
Q 010842 171 IAARDRALDAVGAENMHKLVVYGSDQTH-STFAKVCKLAGVSPANIRALPTSV----D----ANFSLSPQLLRRAVEADV 241 (499)
Q Consensus 171 ~~ar~~~~~~~~~~g~~~~~i~~s~~~H-~s~~ka~~~~G~g~~~v~~v~~~~----~----~~~~~d~~~L~~~i~~~~ 241 (499)
.++++..... |..+..|+++ ..| .++..++...|. .++.++.+. + .++.+|+++|+++|++..
T Consensus 109 ~~~~~~~~~~----Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~ 180 (467)
T 1ax4_A 109 PVLLKYKQKE----GKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG 180 (467)
T ss_dssp HHHHHHHHHT----TCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred HHHHHhhccC----CCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHHhcC
Confidence 9887532110 1111115556 566 455677888888 777765431 0 124799999999998641
Q ss_pred HcCCccEEEEEecCCCcc-ccc---CChhHHHHHHHHhCCEEEeeccccc-hhcc--------Cc-cchhhhcC-CCCCc
Q 010842 242 EAGLVPLFLCATVGTTST-TAV---DNVEPLAEVANEYGIWVHVDAAYAG-SACI--------CP-EFRHYLNG-IERVD 306 (499)
Q Consensus 242 ~~g~~p~~vv~t~gtt~~-G~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~~--------~~-~~~~~~~g-~~~aD 306 (499)
...+.+|+++.++|++ |.+ +++++|+++|++||+|+|+|++++. ...+ .+ ....+... ...+|
T Consensus 181 --~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (467)
T 1ax4_A 181 --ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD 258 (467)
T ss_dssp --GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS
T ss_pred --CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc
Confidence 0124578888889999 775 6688999999999999999998654 1110 00 00011000 02478
Q ss_pred eeEecccccccCCCcceEEEEeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHHHHHHhcHHH
Q 010842 307 SFSFSPHKWLLSYLDCCCLWVKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWMVLRSYGVLN 384 (499)
Q Consensus 307 si~~~~hK~l~~p~~~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g 384 (499)
++++++||+++.|.| |+++.+++ +...........+ .... .+ .+.....+ .+..++...- +
T Consensus 259 ~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~~----------~~---~~~~~~~~~a~~~~l~~~~-~- 321 (467)
T 1ax4_A 259 ALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGFV----------TY---GGLAGRDMAAMVQGLEEGT-E- 321 (467)
T ss_dssp EEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCST----------TT---TTCCHHHHHHHHHHHHHTT-C-
T ss_pred eEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-cccc----------cc---CCccchHHHHHHHHHHHhh-h-
Confidence 999999999987744 66666645 4332211111111 0000 00 01110111 1111232221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHH-HhcCCEEEEeeeE---
Q 010842 385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWV-NSTGRVYLTHTIV--- 459 (499)
Q Consensus 385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~--- 459 (499)
++.+++..++++++.+.|++ ++++++.+.....+.+....... .... .....++.++| .+.|..+...+.+
T Consensus 322 -~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~v~~~g~~~~~ 397 (467)
T 1ax4_A 322 -EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIPGD--QFPAQAVINALYLESGVRAVEIGSFLLG 397 (467)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSCGG--GCHHHHHHHHHHHHHCEECEEESHHHHC
T ss_pred -hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccccccC--CCCHHHHHHHHHHhcCceeeecCccccc
Confidence 23455556778889999987 57776655555556555211000 0000 11145677777 6778654431211
Q ss_pred -----C-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 460 -----G-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 460 -----~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+ ...++|+++....+|++||++++++|+++.+++
T Consensus 398 ~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 398 RDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp BCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred cccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 1 136899998534589999999999999988764
No 137
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.87 E-value=8.9e-21 Score=191.82 Aligned_cols=321 Identities=12% Similarity=0.060 Sum_probs=211.8
Q ss_pred HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC---CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842 104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP---KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~ 180 (499)
..+.+.+...+. ....|....+..++++++.+|+.+.+|.+ .+ ...++|+|||+|+..++.+...
T Consensus 46 ~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~------~~i~~t~g~~~al~~~~~~~~~----- 113 (396)
T 3jtx_A 46 KVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDAD------NEILPVLGSREALFSFVQTVLN----- 113 (396)
T ss_dssp HHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTT------TSEEEESSHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC------CeEEEcCCcHHHHHHHHHHHhC-----
Confidence 344555555443 23345444557899999999999999964 22 0368999999999888877642
Q ss_pred hhhhccCC-----eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC
Q 010842 181 VGAENMHK-----LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG 255 (499)
Q Consensus 181 ~~~~g~~~-----~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g 255 (499)
++ ..|+++..+|.++..+++..|. +++.+|++++ ++.+|+++|++++.++ +.+|+++.+
T Consensus 114 ------~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-g~~~d~~~l~~~~~~~------~~~v~l~~p 177 (396)
T 3jtx_A 114 ------PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPAP-SFNPDWRSISEEVWKR------TKLVFVCSP 177 (396)
T ss_dssp ------C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCTT-TCCCCGGGSCHHHHHT------EEEEEEESS
T ss_pred ------CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCCC-CCccCHHHHHHhhccC------cEEEEEECC
Confidence 22 5788899999999999999999 9999999654 4789999999999764 347777899
Q ss_pred CCcccccCChhH---HHHHHHHhCCEEEeeccccchhccCccchhhhc-----C-CCCCceeEecccccccCC-CcceEE
Q 010842 256 TTSTTAVDNVEP---LAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----G-IERVDSFSFSPHKWLLSY-LDCCCL 325 (499)
Q Consensus 256 tt~~G~id~l~~---I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g-~~~aDsi~~~~hK~l~~p-~~~g~l 325 (499)
+|+||.+-|.++ |+++|++||+++++|++|+.+............ + -...+.++.+.+|.++.| ..+|++
T Consensus 178 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (396)
T 3jtx_A 178 NNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV 257 (396)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence 999999966555 999999999999999999875432211111110 0 123678888999975544 567887
Q ss_pred EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHh
Q 010842 326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVK 404 (499)
Q Consensus 326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~ 404 (499)
+.. +... +.+.....+.. .....+...++...+. .+.+++..++..++.+++.+.|+
T Consensus 258 ~~~-~~~~-~~~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 315 (396)
T 3jtx_A 258 AGD-AELL-KNFLLYRTYHG--------------------SAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQ 315 (396)
T ss_dssp EEC-HHHH-HHHHHHHHHHT--------------------CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeC-HHHH-HHHHHHHhhcc--------------------cCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654 3322 22211100000 0112233333333332 35677888888889999999998
Q ss_pred cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeE--------CCEEEEEEeccCCCCc
Q 010842 405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIV--------GGLYMLRFAVGASLTD 475 (499)
Q Consensus 405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--------~g~~~lRi~~~~~~~t 475 (499)
+. +.+..+.....+++.+.... ..++.++|.+ .|+.+..+..+ .+..++|++++ . +
T Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~-~--~ 380 (396)
T 3jtx_A 316 QV--FDVKLPDASFYIWLKVPDGD----------DLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV-A--D 380 (396)
T ss_dssp TT--SCCCCCSSSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC-S--C
T ss_pred hc--CCccCCCeeEEEEEECCCCC----------HHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc-C--C
Confidence 75 33333333345555654321 3456666644 47554443322 23478999986 2 8
Q ss_pred HHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEG 489 (499)
Q Consensus 476 ~~di~~l~~~l~~~ 489 (499)
+++|++++++|.++
T Consensus 381 ~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 381 VATCVKAAEDIVSL 394 (396)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 138
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.87 E-value=1.4e-21 Score=198.66 Aligned_cols=336 Identities=10% Similarity=0.020 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
+..+.+.+...+... ...|....+..++++++.+|+.+.+|.+... ....++|+|||+|+..++.+..+
T Consensus 38 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------ 107 (410)
T 3e2y_A 38 PSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD------ 107 (410)
T ss_dssp CHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC------
Confidence 344555555555432 2345555557899999999999988874210 01469999999999988877632
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC---------CCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV---------DANFSLSPQLLRRAVEADVEAGLVPLFLCA 252 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---------~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~ 252 (499)
++..|+++..+|.++...+...|. +++.+|++. +.+|.+|+++|+++++++ +.+|++
T Consensus 108 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~ 173 (410)
T 3e2y_A 108 -----PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIIL 173 (410)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEE
T ss_pred -----CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEE
Confidence 456788889999999999999999 999999862 124679999999988543 447888
Q ss_pred ecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEeccccccc-CCCcceEEE
Q 010842 253 TVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLL-SYLDCCCLW 326 (499)
Q Consensus 253 t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~-~p~~~g~l~ 326 (499)
+.++|++|.+ +++++|+++|++||+++++|++|+.+........... .+....+.+..+.+|.++ ....+|+++
T Consensus 174 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~ 253 (410)
T 3e2y_A 174 NTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI 253 (410)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEE
Confidence 8999999999 6899999999999999999999987543221111111 111123467778999997 446688887
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---------cHHHHHHHHHHHHHHHH
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---------GVLNLQSHIRSDIRLAK 397 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~~~~~a~ 397 (499)
.+++ .+ +.+....... +.....+...++...+ ..+.++++.++..++++
T Consensus 254 ~~~~-~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (410)
T 3e2y_A 254 GPAH-LI-KHLQTVQQNS--------------------FYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRD 311 (410)
T ss_dssp CCHH-HH-HHHHHHHHTT--------------------TCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHH
T ss_pred ECHH-HH-HHHHHHHHhh--------------------ccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHH
Confidence 7553 22 2221100000 0001223333333332 24567888888899999
Q ss_pred HHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcch-hHHHHHHHHHHHH-hcCCEEEEeeeEC-------CEEEEEE
Q 010842 398 MFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSAD-TEMLNRKLLDWVN-STGRVYLTHTIVG-------GLYMLRF 467 (499)
Q Consensus 398 ~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~-~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~~lRi 467 (499)
++.+.|+++ ++++..+.....+++.+..... .+... ......++.+++. +.|+.+..+..+. +..++|+
T Consensus 312 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRi 390 (410)
T 3e2y_A 312 RMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRF 390 (410)
T ss_dssp HHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEE
T ss_pred HHHHHHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEE
Confidence 999999988 8887755554555555543110 00000 0001224455443 4575544444342 2478999
Q ss_pred eccCCCCcHHHHHHHHHHHHH
Q 010842 468 AVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 468 ~~~~~~~t~~di~~l~~~l~~ 488 (499)
+++ .++++|++++++|++
T Consensus 391 s~~---~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 391 CFI---KKDSTLDAAEEIFRA 408 (410)
T ss_dssp ECC---CCHHHHHHHHHHHHT
T ss_pred EEc---CCHHHHHHHHHHHHh
Confidence 986 399999999999875
No 139
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.87 E-value=5.8e-21 Score=190.80 Aligned_cols=307 Identities=11% Similarity=0.051 Sum_probs=204.5
Q ss_pred HHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 105 FLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 105 ~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
.+.+.+...+... ...|. .+...+++++ +++++|.+.+ ..++|+|||+|+..++.+..+
T Consensus 43 ~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~----la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~------ 104 (360)
T 3hdo_A 43 EVVKAILEELGPDGAALRIYP-SASSQKLREV----AGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA------ 104 (360)
T ss_dssp HHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHH----HHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhcccchhhcCC-CCchHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC------
Confidence 3445555555432 22332 2333445544 7788887554 469999999999888876532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..|+++..+|.++...++..|. +++.+|.+++ +.+ +++++.+ .+.+|+++.++|++|.
T Consensus 105 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~--~~~--~~l~~~~--------~~~~v~i~~p~nptG~ 164 (360)
T 3hdo_A 105 -----EGEEIGYVHPSYSYYGTLAEVQGA---RVRTFGLTGD--FRI--AGFPERY--------EGKVFFLTTPNAPLGP 164 (360)
T ss_dssp -----TTCEEEEESSSCTHHHHHHHHHTC---EEEEECBCTT--SSB--TTCCSSB--------CSSEEEEESSCTTTCC
T ss_pred -----CCCEEEEcCCChHHHHHHHHHCCC---EEEEeeCCCC--CCH--HHHHhhc--------CCCEEEEeCCCCCCCC
Confidence 456788899999999999999999 9999998753 455 4443322 1237888899999999
Q ss_pred cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
+-|+++|.++|+++|+++++|++|+.+.. ......... ...+.++.+++|+++.| ..+|+++.+ ++.. +.+...
T Consensus 165 ~~~~~~l~~l~~~~~~~li~De~~~~~~~--~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~~~~~ 239 (360)
T 3hdo_A 165 SFPLEYIDELARRCAGMLVLDETYAEFAE--SNALELVRR-HENVVVTRTLSKSYSLAGMRIGLAIAR-PEVI-AALDKI 239 (360)
T ss_dssp CCCHHHHHHHHHHBSSEEEEECTTGGGSS--CCCTHHHHH-CSSEEEEEESTTTTSCTTSCCEEEECC-HHHH-HHHHHH
T ss_pred CcCHHHHHHHHHHCCCEEEEECChHhhCC--cchhHHhcc-CCCEEEEecchHhhcCCccceeeEeeC-HHHH-HHHHHh
Confidence 99999999999999999999999987421 111111111 12457788999998744 567888773 3322 222111
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 419 (499)
... + ....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.
T Consensus 240 ~~~----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~ 295 (360)
T 3hdo_A 240 RDH----------------Y------NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNY 295 (360)
T ss_dssp SCS----------------C------CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSE
T ss_pred CCC----------------C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccE
Confidence 000 0 012344444443332 3567888889999999999999988 88875 556566
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+.+.+.... ..++.+.|.++|+.+.......+..++|++++ +++|+++++++|+++.+.
T Consensus 296 ~~~~~~~~~----------~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 296 LFATPPDRD----------GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp EEEECTTCC----------HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCC----------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHhcc
Confidence 666654322 45677778888854332222233478999984 899999999999988653
No 140
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.87 E-value=8.3e-21 Score=194.42 Aligned_cols=314 Identities=10% Similarity=0.051 Sum_probs=210.8
Q ss_pred cccccChhhHHHHHHHHHHHHHHc-CCCCccccCCCcc---EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842 119 FNWLASPASTELEIVVMDWLATML-KLPKTFMFSGTGG---GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS 194 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~---g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s 194 (499)
..|....+..++++++.+|+.+.. +.+.+ . .++|+|||+|+..++.+..+ ++..|+++
T Consensus 82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~ 143 (430)
T 2x5f_A 82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP 143 (430)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence 345544567889999888887663 33322 3 59999999999888877632 45678889
Q ss_pred CCCchhHHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHH
Q 010842 195 DQTHSTFAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAE 270 (499)
Q Consensus 195 ~~~H~s~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ 270 (499)
..+|..+...++. .|. +++.+|+++++ +.+|+++|++++++. +..+.+|+++.++|+||.+-| +++|++
T Consensus 144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 216 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGA---NLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE 216 (430)
T ss_dssp SSCCTHHHHHHTTTTCC---EEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCC---eEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence 9999999999998 999 99999987643 689999999999752 223457788999999999988 899999
Q ss_pred HHHH-----hCCEEEeeccccchhccCccchh---hhcCCCCC---ceeEecccccccCC-CcceEEEE--eCchhHHHh
Q 010842 271 VANE-----YGIWVHVDAAYAGSACICPEFRH---YLNGIERV---DSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKA 336 (499)
Q Consensus 271 ia~~-----~~~~lhvD~A~g~~~~~~~~~~~---~~~g~~~a---Dsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~ 336 (499)
+|++ ||+++++|++|+.+......... .+.+.... +.+..+.||+++.| ..+|++++ +++... +.
T Consensus 217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~-~~ 295 (430)
T 2x5f_A 217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTK-EV 295 (430)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHH-HH
T ss_pred HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHH-HH
Confidence 9999 99999999999876432211111 12222234 56688999999755 34799888 233322 22
Q ss_pred hcCCccC-CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHh----cC
Q 010842 337 LSTDPEY-LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVK----SD 406 (499)
Q Consensus 337 ~~~~~~y-l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~----~~ 406 (499)
+...... ... .+.....+..+++...+. .+.+++..++..++++++.+.|+ +.
T Consensus 296 l~~~~~~~~~~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 358 (430)
T 2x5f_A 296 LEAKVKGLIRS-----------------NISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS 358 (430)
T ss_dssp HHHHHHHHHHT-----------------TTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHhhhhhc-----------------ccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 2110000 000 000112344444444432 12233377778888899999998 44
Q ss_pred CCeEEEcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842 407 PRFEIVVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484 (499)
Q Consensus 407 ~~~~~~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~ 484 (499)
++++.. +..+ .+++.+.+.. ..++.++|.+ .|+.+ .+. +..++|++++ . +++++|+++++
T Consensus 359 -g~~~~~-~~~g~~~~~~~~~~~----------~~~~~~~l~~~~gi~v-~~g---~~~~iRis~~-~-~~~e~i~~~~~ 420 (430)
T 2x5f_A 359 -HWQAYD-FNSGYFMAIKVHDVD----------PEALRKHLIDKYSIGV-IAL---NATDIRIAFS-C-VEKDDIPHVFD 420 (430)
T ss_dssp -TEEECC-CCBSSEEEEEESSSC----------HHHHHHHHHHHHCEEC-EEC---SSSEEEEEGG-G-SCGGGHHHHHH
T ss_pred -CceeeC-CCceEEEEeCCCCCC----------HHHHHHHHHHhCCEEE-ecC---CCCeEEEEEe-c-CCHHHHHHHHH
Confidence 787764 4433 4666665211 3567777776 78544 332 4467999996 3 58899999999
Q ss_pred HHHHHHHHH
Q 010842 485 LIMEGADRL 493 (499)
Q Consensus 485 ~l~~~~~~l 493 (499)
+|+++.+++
T Consensus 421 ~l~~~l~~~ 429 (430)
T 2x5f_A 421 SIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999988764
No 141
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=3e-20 Score=183.67 Aligned_cols=300 Identities=11% Similarity=0.063 Sum_probs=203.6
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...... ...| ..+...++++. +++++|.+.+ ..++|+|+|+++..++.+.
T Consensus 33 ~v~~a~~~~~~~-~~~y-~~~~~~~lr~~----la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~----------- 88 (337)
T 3p1t_A 33 RVQAAIAAAAAR-INRY-PFDAEPRVMRK----LAEHFSCPED-------NLMLVRGIDECFDRISAEF----------- 88 (337)
T ss_dssp HHHHHHHHHGGG-TTSC-CTTHHHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHS-----------
T ss_pred HHHHHHHHhhhh-hccC-CCCchHHHHHH----HHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc-----------
Confidence 344555554432 2334 34555555555 7888888654 3588999998887776654
Q ss_pred ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
++..|+++.++|.++...++..|+ +++.+|++++ +.+|+++|+++. .+.+|+++.++|+||.+.|
T Consensus 89 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~ 153 (337)
T 3p1t_A 89 --SSMRFVTAWPGFDGYRARIAVSGL---RHFEIGLTDD--LLLDPNDLAQVS--------RDDCVVLANPSNPTGQALS 153 (337)
T ss_dssp --TTSEEEEESSSCSHHHHHHTTSCC---EEEEECBCTT--SSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCC
T ss_pred --CCCeEEEeCCCcHHHHHHHHHcCC---EEEEecCCCC--CCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCC
Confidence 244688899999999999999999 9999998753 699999998751 2358899999999999999
Q ss_pred hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccC
Q 010842 265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
+++|.++|+++++ +++|++|+.+....+ ........+.++.+.+|+++ .+..+|+++.++. .. +.+.....+
T Consensus 154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~----~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~-~~l~~~~~~ 226 (337)
T 3p1t_A 154 AGELDQLRQRAGK-LLIDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSE-LI-AAMKRKQWF 226 (337)
T ss_dssp HHHHHHHHHHCSE-EEEECTTGGGSSCSS----SCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHH-HH-HHHHTTSCT
T ss_pred HHHHHHHHHhCCc-EEEECCChhhccccc----cccccCCCEEEEeeCchhccCcchheEEEEeCHH-HH-HHHHhhcCC
Confidence 9999999999997 666999986432111 11122346788899999997 4466788876543 22 222211000
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF 422 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 422 (499)
. ....+...+....+. .+.+++.+++..++++++.+.|++. ++++. ++..+.+.+
T Consensus 227 ~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~ 282 (337)
T 3p1t_A 227 C----------------------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLV 282 (337)
T ss_dssp T----------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSEEEE
T ss_pred C----------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCeEEEE
Confidence 0 012233333333432 2456777888888899999999987 77765 555566666
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.... ...+.+.|.++|+.+..+..+....++|++++ +++|+++++++|+++.
T Consensus 283 ~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 283 ENAA------------GERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYS 334 (337)
T ss_dssp ECTT------------THHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred EcCC------------HHHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 5532 13455667777865544444444568999985 6899999999998864
No 142
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=3.5e-20 Score=191.27 Aligned_cols=320 Identities=13% Similarity=0.043 Sum_probs=201.1
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH- 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H- 198 (499)
.|..++...+++++ +++++|.+. .++|+|||+|+..++.++.+ ++. +++..+|
T Consensus 70 ~y~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~ 123 (456)
T 2ez2_A 70 AYAGSENFYHLERT----VQELFGFKH---------IVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF 123 (456)
T ss_dssp CSSSCHHHHHHHHH----HHHHHCCSE---------EEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred hcccChhHHHHHHH----HHHHhCCCc---------EEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence 46667777777777 777777653 49999999999998877632 333 4566777
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCC----C----CCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC---hh
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVD----A----NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN---VE 266 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~----~----~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~---l~ 266 (499)
.++..++...|. .++.++++++ . ++.+|+++|+++|+++++ ..+.+|+++.++| ++|.+-| ++
T Consensus 124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~ 198 (456)
T 2ez2_A 124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR 198 (456)
T ss_dssp HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence 788899999999 9999998732 1 268999999999987541 1234677777877 9999866 99
Q ss_pred HHHHHHHHhCCEEEeeccccch---------hccCccch-hh--hcCCCCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842 267 PLAEVANEYGIWVHVDAAYAGS---------ACICPEFR-HY--LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV 334 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~---------~~~~~~~~-~~--~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~ 334 (499)
+|+++|++||+|+|+|++|+.+ ........ .. ..+ ...|.+++++||+++.| .+|+++.++++...
T Consensus 199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~ 276 (456)
T 2ez2_A 199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF-SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFS 276 (456)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-TTCSEEEEETTTTTCCS-SCEEEEESCHHHHH
T ss_pred HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-ccCCEEEEeCcccCCCC-ceeEEEECCHHHHH
Confidence 9999999999999999999763 11111110 00 001 13688888899998755 46777775554332
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
........+. +.. ...+.....+.. +++... +.+ ++..++..++++++.+.|++. +++++.
T Consensus 277 ~~~~~~~~~~-~~~-------------~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 338 (456)
T 2ez2_A 277 SAKELVVVYE-GMP-------------SYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVE 338 (456)
T ss_dssp HHHHHHHHHT-CCT-------------TTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCS
T ss_pred HHHHHHhhcc-Ccc-------------cccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCcccc
Confidence 2111111110 000 000111112211 122221 333 467777888889999999885 777655
Q ss_pred CCCceEEEEEecC--CCCCCcchhHHH-HHHHHHHH-HhcCCEEEEeee-------------ECCEEEEEEeccCCCCcH
Q 010842 414 PRHFALVCFRLNP--YPHSGSADTEML-NRKLLDWV-NSTGRVYLTHTI-------------VGGLYMLRFAVGASLTDE 476 (499)
Q Consensus 414 ~~~~~~v~f~~~~--~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------------~~g~~~lRi~~~~~~~t~ 476 (499)
+.....+.+.+.. .. .+ ...+ .+.+.++| .+.|+..+.... ..+..++|+++....+++
T Consensus 339 p~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~ 414 (456)
T 2ez2_A 339 PVGGHAVFLDARRFCEH-LT---QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTY 414 (456)
T ss_dssp SCCSSEEEEEHHHHTTT-SC---GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCH
T ss_pred CCCceEEEEEhHHhcCC-CC---hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCH
Confidence 5444555555421 11 01 1222 45556666 466754433221 112367999996333799
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 010842 477 RHVVAAWELIMEGADRLF 494 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~l~ 494 (499)
+||++++++|+++.++..
T Consensus 415 e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 415 AHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999999887643
No 143
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.87 E-value=1.4e-21 Score=199.14 Aligned_cols=308 Identities=12% Similarity=0.047 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH---
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA--- 202 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~--- 202 (499)
....+++.+.+++++++|.+... +++++||+|+..++.+... ++..|+++..+|.++.
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~~--------v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~ 133 (420)
T 3gbx_A 73 YVDVVEQLAIDRAKELFGADYAN--------VQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG 133 (420)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred HHHHHHHHHHHHHHHHhCCCCce--------eEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence 34567888889999999997653 5566779999888776532 5667888888898743
Q ss_pred HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842 203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD 282 (499)
......|.+. ..+.++.+. ++.+|+++|++++++.. +.+|+++.+++ |...|+++|+++|++||+++++|
T Consensus 134 ~~~~~~g~~~-~~~~~~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D 203 (420)
T 3gbx_A 134 SPVNFSGKLY-NIVPYGIDE--SGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD 203 (420)
T ss_dssp ----CHHHHS-EEEEEEECT--TCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhcccce-eEEeccCCc--cCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence 2222334310 334455553 46899999999998741 23666666655 56889999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
++|+.+......+.. .+..+|+++.++||++++|.| |+++.++. ..+.+.+.. +.....
T Consensus 204 e~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~---~~~~~~------------- 263 (420)
T 3gbx_A 204 MAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNS---AVFPSA------------- 263 (420)
T ss_dssp CTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHH---HHC----------------
T ss_pred CCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhh---hcCCCC-------------
Confidence 998655432222111 123489999999999977764 77777651 112222211 000000
Q ss_pred cCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHH
Q 010842 362 VGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLN 439 (499)
Q Consensus 362 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~ 439 (499)
..+... ....+..++.....++++++.++..++++++.+.|++ .+++++.+ +..+.+.+.+.+.. ...
T Consensus 264 -~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------~~~ 333 (420)
T 3gbx_A 264 -QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVSGGTENHLFLLDLVDKN--------LTG 333 (420)
T ss_dssp --CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGT--------CCH
T ss_pred -CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh-cCCeeccCCCCCeEEEEEcCCCC--------CCH
Confidence 000000 1123344454444577888999999999999999988 48888753 45566666664321 013
Q ss_pred HHHHHHHHhcCCEEEEe------eeECCEEEEEEeccCC---CCcHHHHHHHHHHHHHHHHH
Q 010842 440 RKLLDWVNSTGRVYLTH------TIVGGLYMLRFAVGAS---LTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 440 ~~l~~~l~~~g~~~~~~------~~~~g~~~lRi~~~~~---~~t~~di~~l~~~l~~~~~~ 492 (499)
..+.+.|.+.|+.+... ....+...+|+++... ..++++|++++++|+++.++
T Consensus 334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 334 KEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 45566676778654331 1112234499988421 24589999999999887654
No 144
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=2.9e-20 Score=187.69 Aligned_cols=283 Identities=16% Similarity=0.176 Sum_probs=193.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.|...+++++ +++++|.+.. +++++||+|+..++.++.. ++..|+++...|.++..
T Consensus 51 ~~~~~~l~~~----la~~~~~~~~---------i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~ 106 (386)
T 1cs1_A 51 NPTRDVVQRA----LAELEGGAGA---------VLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYR 106 (386)
T ss_dssp CHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHH
T ss_pred CccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHHH
Confidence 3555555555 7788887633 6667779999988877632 45678888899988555
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
. ++..|+ +++.+|.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++
T Consensus 107 ~~~~~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 170 (386)
T 1cs1_A 107 LFDSLAKRGCY---RVLFVDQG-------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVS 170 (386)
T ss_dssp HHHHHHTTTSC---EEEEECTT-------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCC---EEEEeCCC-------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEE
Confidence 4 355677 88888753 889999999753 347888999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc--eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC--CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~--g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
|+|++|+++....+. . ..+|.++.++||+++.|.+. |++++++++... .+.......
T Consensus 171 i~De~~~~~~~~~~~----~---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~~~~~~------------- 229 (386)
T 1cs1_A 171 VVDNTFLSPALQNPL----A---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAWWANNI------------- 229 (386)
T ss_dssp EEECTTTCTTTCCGG----G---GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHH-------------
T ss_pred EEECCCcccccCCcc----c---cCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHHHHHhc-------------
Confidence 999999887543221 1 14899999999999988764 888887643322 221100000
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C----------------CCceEE
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P----------------RHFALV 420 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~----------------~~~~~v 420 (499)
+.....+..|++++.+ +.+.++.++..++++++.+.|++++.+.-.. + ...+++
T Consensus 230 -------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (386)
T 1cs1_A 230 -------GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML 300 (386)
T ss_dssp -------TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEE
T ss_pred -------CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEE
Confidence 0011234445544443 4566677788888999999998887764331 1 125678
Q ss_pred EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC---------------------------CEEEEEEeccCCC
Q 010842 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG---------------------------GLYMLRFAVGASL 473 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------g~~~lRi~~~~~~ 473 (499)
+|.+... ...+.+.|.+.|+.. .+..+. ...++|+++. ..
T Consensus 301 ~~~~~~~-----------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~ 367 (386)
T 1cs1_A 301 SFELDGD-----------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-IE 367 (386)
T ss_dssp EEEESSC-----------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC-SS
T ss_pred EEEECCC-----------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEc-cC
Confidence 8877531 234566666777643 321111 1368999996 67
Q ss_pred CcHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEG 489 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~ 489 (499)
+++++|+.+.++|+++
T Consensus 368 ~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 368 DGEDLIADLENGFRAA 383 (386)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8888899888888765
No 145
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.87 E-value=1.9e-20 Score=186.82 Aligned_cols=284 Identities=13% Similarity=0.088 Sum_probs=196.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~ 205 (499)
..+++++ +++++|.+.+ ..++|+|+|+++..++.+..+ ++ ..|+++..+|.++..++
T Consensus 60 ~~~lr~~----la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~ 117 (356)
T 1fg7_A 60 PKAVIEN----YAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSA 117 (356)
T ss_dssp CHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHH
T ss_pred HHHHHHH----HHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHH
Confidence 4555555 7777788654 358999999998888776632 44 67888999999999999
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH---HHHHHhCCEEEee
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA---EVANEYGIWVHVD 282 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~---~ia~~~~~~lhvD 282 (499)
+..|. +++.+|.++ +|.+|+++|+++++ + +.+|+++.++|+||.+-|.++|. ++|+ +|+++++|
T Consensus 118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~D 184 (356)
T 1fg7_A 118 ETIGV---ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVAD 184 (356)
T ss_dssp HHHTC---EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEE
T ss_pred HHcCC---EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEE
Confidence 99999 999999874 46899999998875 2 34788889999999997765554 5555 89999999
Q ss_pred ccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842 283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW 360 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 360 (499)
++|+.+.. ......... ....+.+..+.+|+++.| ..+|+++.++ +.. +.+.. ...|
T Consensus 185 e~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~----------------- 243 (356)
T 1fg7_A 185 EAYIEFCP-QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLANE-EVI-NLLMKVIAPY----------------- 243 (356)
T ss_dssp CTTGGGSG-GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEECH-HHH-HHHHHHSCSS-----------------
T ss_pred ccchhhcC-CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeCH-HHH-HHHHHhcCCC-----------------
Confidence 99987641 111111111 112567788999999744 4578888843 322 22211 1111
Q ss_pred ccCCCCCCCcHHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842 361 QVGTGRRFKSLRLWMVLRSYGVLN---LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM 437 (499)
Q Consensus 361 ~~~~sr~~~al~~~~~l~~~g~~g---~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 437 (499)
....+..+++...+...+ +++..++..++++++.+.|++++++..+.++..+.+.+++. .
T Consensus 244 ------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~--------- 306 (356)
T 1fg7_A 244 ------PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--A--------- 306 (356)
T ss_dssp ------CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--T---------
T ss_pred ------CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--C---------
Confidence 112455566666665444 67788888899999999999987654444556666777664 2
Q ss_pred HHHHHHHHHHhcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 438 LNRKLLDWVNSTGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 438 ~~~~l~~~l~~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
..++.++|.++|+.+.. +..+....++|+++. +++|+++++++|++
T Consensus 307 -~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 307 -SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRA 353 (356)
T ss_dssp -HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHh
Confidence 35677778777855433 222222347999985 58999999999875
No 146
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.87 E-value=1.5e-20 Score=187.62 Aligned_cols=301 Identities=12% Similarity=0.013 Sum_probs=189.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST 200 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s 200 (499)
|...+...+++ +++++++|.+.. ++++|||+|+..++.+..... ++.+|+++...|++
T Consensus 44 ~~~~~~~~~l~----~~la~~~~~~~~---------i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~ 101 (359)
T 3pj0_A 44 YGNGAVIEDFE----TKIAKILGKQSA---------VFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLE 101 (359)
T ss_dssp TTBSHHHHHHH----HHHHHHHTCSEE---------EEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHH
T ss_pred ccCCHHHHHHH----HHHHHHhCCCcE---------EEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceee
Confidence 44445555555 458888988654 777999999999888776531 23357777778876
Q ss_pred HHHH---HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccCChhHH---HHHHH
Q 010842 201 FAKV---CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVDNVEPL---AEVAN 273 (499)
Q Consensus 201 ~~ka---~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id~l~~I---~~ia~ 273 (499)
.... +...|. .++.+|.+ ++.+|+++|+++ .+ .+.+|+++.++|++ |.+.|++++ +++|+
T Consensus 102 ~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~ 168 (359)
T 3pj0_A 102 IHEQDGLKELQQI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCH 168 (359)
T ss_dssp HSSTTHHHHHHCC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred ehhcchHHHhcCc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence 5432 356788 88888873 358999999987 22 24477888887777 788665555 99999
Q ss_pred HhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
+||+|+|+|++|..+... ........ ..+|++++++||+++.|.+ |+++ .+++... .+..........
T Consensus 169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~~-~~~~l~~-~~~~~~~~~~~~---- 238 (359)
T 3pj0_A 169 EQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AILA-GNDDFVQ-EAKIWKRRYGGD---- 238 (359)
T ss_dssp HHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEEE-ECHHHHH-HHHHHHHHTTCC----
T ss_pred HcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEEE-CCHHHHH-HHHHHHHHhCCC----
Confidence 999999999998644311 11111222 3489999999999988855 5544 4444332 221100000000
Q ss_pred CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEecCCCCC
Q 010842 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRLNPYPHS 430 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~ 430 (499)
... ......+++..+ +...+.+++..++++++.+.|+++|++++. .++..+.+.+++....
T Consensus 239 -------------~~~-~~~~~~a~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-- 300 (359)
T 3pj0_A 239 -------------LIS-LYPYILSADYYF--EKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA-- 300 (359)
T ss_dssp -------------CSC-CHHHHHHHHHHH--HHHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH--
T ss_pred -------------cch-hHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc--
Confidence 000 011111111122 112245566788899999999999999986 4566777777775421
Q ss_pred CcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEeccCC--CCcHHHHHHHHHHHHHH
Q 010842 431 GSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAVGAS--LTDERHVVAAWELIMEG 489 (499)
Q Consensus 431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~~~~--~~t~~di~~l~~~l~~~ 489 (499)
......+.+.|.++|+.+..+.. ..+..++|+++... ..+.+++++.++.|.+.
T Consensus 301 -----~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 301 -----DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp -----HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred -----chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 22356778888888865433322 25678899988522 35788888888887654
No 147
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=1.1e-20 Score=193.44 Aligned_cols=282 Identities=13% Similarity=0.134 Sum_probs=191.8
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----HHH
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----CKL 207 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~~~ 207 (499)
.++.+++++++|.+.. +++++|++|+..++.+..+ ++..|+++...|.++... +..
T Consensus 117 ~~l~~~lA~l~g~~~~---------v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~~ 176 (445)
T 1qgn_A 117 VVLEEKISALEGAEST---------LLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETILPK 176 (445)
T ss_dssp HHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHHH
Confidence 3344458888888643 7777888999888875532 456788888899887664 455
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~ 287 (499)
.|+ +++.||.+ |+++|+++|++++ +.+|++..++|++|.+.|+++|+++|+++|+++|+|++|+.
T Consensus 177 ~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~ 241 (445)
T 1qgn_A 177 MGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT 241 (445)
T ss_dssp GTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC
T ss_pred cCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence 788 88888753 8999999998643 24788899999999999999999999999999999999986
Q ss_pred hhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
+....+ . . .++|.++.+.||+++.+. .+|+++.++. .+ +.+.. +... .+
T Consensus 242 ~~~~~~----~--~-~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~-~~l~~---~~~~-----------------~g 292 (445)
T 1qgn_A 242 PLNQKA----L--A-LGADLVLHSATKFLGGHNDVLAGCISGPLK-LV-SEIRN---LHHI-----------------LG 292 (445)
T ss_dssp TTTCCT----T--T-TTCSEEEECTTTTTTCSSSCCCEEEEECHH-HH-HHHHH---HHHH-----------------HC
T ss_pred cccCCc----c--c-cCCEEEEECCcccccccccceEEEEEECHH-HH-HHHHH---HHHH-----------------hC
Confidence 543221 1 1 148999999999998553 2888887653 22 22210 0000 01
Q ss_pred CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEcC-----C-----------CceEEEEEecCCC
Q 010842 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-EIVVP-----R-----------HFALVCFRLNPYP 428 (499)
Q Consensus 366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~-----~-----------~~~~v~f~~~~~~ 428 (499)
.....+..|+.++.+ +.+..++++..++++++.+.|++.|++ .+..+ | ..++++|.+.+.
T Consensus 293 ~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~- 369 (445)
T 1qgn_A 293 GALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD- 369 (445)
T ss_dssp CCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-
T ss_pred CCCCHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-
Confidence 112345556665544 667778888888999999999999988 44433 1 357889988642
Q ss_pred CCCcchhHHHHHHHHHHHHhcC------CEE---EEeee------------ECC--EEEEEEeccCCCCcHHHHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTG------RVY---LTHTI------------VGG--LYMLRFAVGASLTDERHVVAAWEL 485 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g------~~~---~~~~~------------~~g--~~~lRi~~~~~~~t~~di~~l~~~ 485 (499)
.....++++.+...+ .++ ..+.. ..| ...+|+|++ .||++.+++.
T Consensus 370 -------~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG-----~Edid~li~~ 437 (445)
T 1qgn_A 370 -------LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG-----VEDFDDLKAD 437 (445)
T ss_dssp -------HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC-----SSCHHHHHHH
T ss_pred -------HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHH
Confidence 122455666553212 111 10000 012 368999996 3589999999
Q ss_pred HHHHHHH
Q 010842 486 IMEGADR 492 (499)
Q Consensus 486 l~~~~~~ 492 (499)
|+++.+.
T Consensus 438 L~~al~~ 444 (445)
T 1qgn_A 438 ILQALDS 444 (445)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9988764
No 148
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.87 E-value=3.5e-21 Score=196.37 Aligned_cols=257 Identities=14% Similarity=0.125 Sum_probs=179.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. +++++|++|+..++.+... ++..|+++...|.+..
T Consensus 80 ~~p~~~~le~~----lA~l~g~~~~---------v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~ 135 (430)
T 3ri6_A 80 SNPTVEDLEQR----LKNLTGALGV---------LALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTL 135 (430)
T ss_dssp CCHHHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred CCHHHHHHHHH----HHHHHCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence 45666666666 8888887653 8888999998888876632 5678889999998877
Q ss_pred H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
. .+...|+ +++.||.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus 136 ~~~~~~~~~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~ 199 (430)
T 3ri6_A 136 SLFQKTLPSFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIP 199 (430)
T ss_dssp HHHHTHHHHTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 7 6678898 89998864 899999998654 34888999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHH---------HhhcCCccCCCCC
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLV---------KALSTDPEYLKNK 347 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~---------~~~~~~~~yl~~~ 347 (499)
+++|++|+.+....+. .. ++|.++.+++|+++.| .-+|+++.+....+. +.+.. ..|+...
T Consensus 200 livD~a~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~-~~~i~~~ 271 (430)
T 3ri6_A 200 LVVDTTMTPPYLLEAK----RL---GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGP-MAFLYKA 271 (430)
T ss_dssp EEEECTTSCTTTCCGG----GG---TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGG-GHHHHHH
T ss_pred EEEECCCcccccCChH----Hc---CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhch-hhHHHHH
Confidence 9999999866542221 12 3899999999999876 246666654432110 00000 0000000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH----------- 416 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------- 416 (499)
...+....+.....+..|+.++ |.+.+..++++..++++++.+.|++.|+++.+..|.
T Consensus 272 ---------~~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~ 340 (430)
T 3ri6_A 272 ---------RKEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAK 340 (430)
T ss_dssp ---------HHTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHH
T ss_pred ---------HHHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHH
Confidence 0000001122234566676665 457888899999999999999999999988554333
Q ss_pred -----ce-EEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842 417 -----FA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN 447 (499)
Q Consensus 417 -----~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~ 447 (499)
.+ +++|.+.. .....++.+.+.
T Consensus 341 ~~~g~Gg~~lsf~l~~---------~~~~~~~~~~l~ 368 (430)
T 3ri6_A 341 RQFRYAGSILTFELES---------KEASYRFMDALK 368 (430)
T ss_dssp HHCSSCCSEEEEECSS---------HHHHHHHHHHCS
T ss_pred HhCCCCceEEEEEECC---------HHHHHHHHHhCC
Confidence 34 88888863 234566666654
No 149
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.5e-20 Score=191.92 Aligned_cols=307 Identities=12% Similarity=0.082 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~ 206 (499)
..+++...+++++++|.+... ++++|||+|+..++.+... ++..|+++..+|.+ +...+.
T Consensus 77 ~~~~~~a~~~~~~~~~~~~~~--------v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~ 137 (425)
T 3ecd_A 77 DEVEALAIERVKRLFNAGHAN--------VQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAK 137 (425)
T ss_dssp CHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC-----------
T ss_pred HHHHHHHHHHHHHHhCCCCce--------eecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchh
Confidence 355666668899999987642 5689999999888876632 56678889999987 323333
Q ss_pred --HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 207 --LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 207 --~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
..|.+. .++.++.+++ ++.+|+++|++++.+.. +.+|+++.+++ |...++++|.++|++||+++|+|++
T Consensus 138 ~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 138 PALSGKWF-NALQYGVSRD-TMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp -------C-EEEEECCCTT-TSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred hhhcccce-eeeecCCCcc-cCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECc
Confidence 444411 3345555543 47999999999997531 23666665554 7889999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
|+.+....+..... +..+|+++.++||++.+|. +|+++.+++... +.+.. +.... ...
T Consensus 209 ~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~-~~~~~---~~~~~--------------~~~ 266 (425)
T 3ecd_A 209 HIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIA-KKINS---AVFPG--------------LQG 266 (425)
T ss_dssp GGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHH-HHHHH---HHC-------------------
T ss_pred ChHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHH-HHHHh---hhCcc--------------ccC
Confidence 76554432222111 2237999999999997665 588777754332 22211 00000 000
Q ss_pred CCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842 365 GRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKL 442 (499)
Q Consensus 365 sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l 442 (499)
+... ....+++++.....++++++.++..++++++.+.|++. +++++.+ +..+++.+.+.+.. .....+
T Consensus 267 ~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 337 (425)
T 3ecd_A 267 GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKG--------LKGAQV 337 (425)
T ss_dssp CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------CCHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCC--------CCHHHH
Confidence 0000 12334445544455778889999999999999999985 7888753 35566766665321 013456
Q ss_pred HHHHHhcCCEEEEee---e---ECCEEEEEEecc---CCCCcHHHHHHHHHHHHHHHHHH
Q 010842 443 LDWVNSTGRVYLTHT---I---VGGLYMLRFAVG---ASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 443 ~~~l~~~g~~~~~~~---~---~~g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.|.++|+.+.... . ......+|+++. ....++++|++++++|+++.++.
T Consensus 338 ~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 338 EQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 666767785443211 0 112346999853 23345999999999999887765
No 150
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.86 E-value=6.1e-20 Score=189.03 Aligned_cols=307 Identities=12% Similarity=0.005 Sum_probs=202.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
..|...++..++++++.+|+. .|++... ...++|+|+++++..+ .+..+ ++..|+++..+|
T Consensus 105 ~~y~~~~g~~~lr~~ia~~~~--~g~~~~~-----~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~~ 165 (449)
T 3qgu_A 105 SGYGAEQGQGALREAVASTFY--GHAGRAA-----DEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPSY 165 (449)
T ss_dssp CCSTTTTCCHHHHHHHHHHHH--TTTTCCG-----GGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESCC
T ss_pred CCCCCCCCcHHHHHHHHHHHH--cCCCCCH-----HHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCCC
Confidence 455555667889999887776 5543221 2468999999887665 33221 466788899999
Q ss_pred hhHHHHHHHhCCCCCC----------eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---h
Q 010842 199 STFAKVCKLAGVSPAN----------IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---V 265 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~----------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l 265 (499)
.++..+++..|. + ++.+|++.++.+..|++++ ..+.+|+++.++|+||.+-+ +
T Consensus 166 ~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l 231 (449)
T 3qgu_A 166 PVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQL 231 (449)
T ss_dssp THHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHH
T ss_pred hhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHH
Confidence 999999999998 7 9999998765566665432 12346777799999999955 8
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccccc-CCCcceEEEEeCchhH------HHh
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLL------VKA 336 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l------~~~ 336 (499)
++|+++|++||+++++|++|+++.......... +.+....+.++.+.+|+++ ....+|+++.+++..- ...
T Consensus 232 ~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 311 (449)
T 3qgu_A 232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHAD 311 (449)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHH
T ss_pred HHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHH
Confidence 888999999999999999998864321111111 1112245688899999997 4467899887654210 000
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 413 (499)
+.....+ .......+...++...+. .+.++++.++..++++++.+.|++. ++++..
T Consensus 312 ~~~~~~~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 370 (449)
T 3qgu_A 312 WNRVMTT--------------------CFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYG 370 (449)
T ss_dssp HHHHHHH--------------------SCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred HHHHhhc--------------------ccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeC
Confidence 0000000 000112344555555543 3567788888999999999999988 788775
Q ss_pred CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+.....+.+.+.... ..++.++|.++ |+.+..+..+ .+..++|+++. .++++|++++++|+++.
T Consensus 371 ~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~---~~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 371 GDDAPYIWVGFPGKP----------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF---GSRENILEAVRRFKEAY 437 (449)
T ss_dssp SSSSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEECCCCC----------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 544566666664211 34566666665 7544443333 23478999975 48999999999999876
Q ss_pred HH
Q 010842 491 DR 492 (499)
Q Consensus 491 ~~ 492 (499)
++
T Consensus 438 ~~ 439 (449)
T 3qgu_A 438 GK 439 (449)
T ss_dssp C-
T ss_pred Hh
Confidence 54
No 151
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.86 E-value=1.6e-20 Score=191.49 Aligned_cols=333 Identities=8% Similarity=-0.005 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV 181 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~ 181 (499)
++..+.+.+..........|....+..++++++.+|+.+..+.+.. ...++|+|||+|+..++.+..+
T Consensus 57 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~------ 124 (418)
T 3rq1_A 57 FLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE------ 124 (418)
T ss_dssp CCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC------
T ss_pred ccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC------
Confidence 3344555555544323345655667889999988888777664311 1358999999999988876532
Q ss_pred hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccc
Q 010842 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTT 260 (499)
Q Consensus 182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G 260 (499)
++..|+++.++|.++...++..|. +++.+|+++++ +.+|+++|++++++..... ...+|+++.+ +|+||
T Consensus 125 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG 194 (418)
T 3rq1_A 125 -----PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDEH-NNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTG 194 (418)
T ss_dssp -----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCTT-SSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTC
T ss_pred -----CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCCC-CCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCC
Confidence 567788999999999999999999 99999986543 7999999999998642211 1236777778 89999
Q ss_pred ccCChhHHH---HHHH------HhCCEEEeeccccchhccCccchhh---hcCCCCCc---eeEecccccccCC-CcceE
Q 010842 261 AVDNVEPLA---EVAN------EYGIWVHVDAAYAGSACICPEFRHY---LNGIERVD---SFSFSPHKWLLSY-LDCCC 324 (499)
Q Consensus 261 ~id~l~~I~---~ia~------~~~~~lhvD~A~g~~~~~~~~~~~~---~~g~~~aD---si~~~~hK~l~~p-~~~g~ 324 (499)
.+-|.+++. ++|+ +||+++++|++|.++.......... ..++. -| .++.+.+|.++.| ...|+
T Consensus 195 ~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~ 273 (418)
T 3rq1_A 195 YSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLP-KEILTCVCYSLSKGFTMYGQRVGA 273 (418)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCC-TTEEEEEEEESTTTTTCCSSCCEE
T ss_pred CCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcC-CCceEEEEEeCCCCCcCcCCcceE
Confidence 997765555 5555 8999999999997654321111111 11221 23 5667899998754 55788
Q ss_pred EEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHH
Q 010842 325 LWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIR 394 (499)
Q Consensus 325 l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~ 394 (499)
++. ++++.. +.+.....+.... .......+...++...+.. +..+++.++..+
T Consensus 274 ~~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (418)
T 3rq1_A 274 MIGISDDEEIA-DEFFEVNKSTSRA----------------TWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRD 336 (418)
T ss_dssp EEEEESSHHHH-HHHHHHHHHHHHH----------------HTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHH-HHHHHHHHHHHhh----------------ccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 876 244332 2221111110000 0001123444444444422 123345566777
Q ss_pred HHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842 395 LAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT 474 (499)
Q Consensus 395 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~ 474 (499)
+++++.+.|+++ ++++. ++..+.+.|.-.+ . ..++.+.|.++|+.+..+ ..++|++++ ..
T Consensus 337 ~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-~----------~~~~~~~l~~~gi~v~~g-----~~~iRis~~--~~ 396 (418)
T 3rq1_A 337 RADIFKQEAAQV-GLPML-PYRGGFFITIPTD-S----------ANAICEELKKEHIYVIAL-----ANGIRIAAC--GI 396 (418)
T ss_dssp HHHHHHHHHHHH-TCCCC-CCCSSSEEEEECT-T----------HHHHHHHHHHTTEECEEC-----SSEEEEEGG--GS
T ss_pred HHHHHHHHHHhc-CCCCC-CCCceEEEEcCCC-C----------HHHHHHHHHhCCEEEecC-----CCCeEEEEe--cC
Confidence 888888888887 77765 3444444332112 1 345667777778544332 346999974 35
Q ss_pred cHHHHHHHHHHHHHHHHHHh
Q 010842 475 DERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 475 t~~di~~l~~~l~~~~~~l~ 494 (499)
++++|++++++|.++.+++.
T Consensus 397 ~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 397 PKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp CHHHHTTHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999987763
No 152
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.86 E-value=2.2e-20 Score=193.40 Aligned_cols=353 Identities=11% Similarity=0.039 Sum_probs=201.1
Q ss_pred cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHH
Q 010842 91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTL 170 (499)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al 170 (499)
.|+.+.++.+. +. +.+.+...+......|..++...+++++ +++++|.+. +++|+|||+||..++
T Consensus 42 ~ylD~~~~~~~-~~-v~~a~~~~l~~~~~~y~~~~~~~~l~~~----la~~~~~~~---------v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 42 VFIDLLTDSGT-GA-VTQSMQAAMMRGDEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYI 106 (467)
T ss_dssp CSEECSCCSSC-SC-CCHHHHHHTTSCCCCSSSCHHHHHHHHH----HHHHHCCSE---------EEEEC--CCSHHHHH
T ss_pred eeEecccCCCc-HH-HHHHHHHHhccCcceeccCchhHHHHHH----HHHHhCcCc---------EEEcCCcHHHHHHHH
Confidence 56666554443 33 3333444454333456666766666665 777777643 599999999999999
Q ss_pred HHHHHHHHhHhhhhccCC-eEEEcCCCCchhH-HHHHHHhCCCCCCeEEe------eCCC--CCCCccCHHHHHHHHHHH
Q 010842 171 IAARDRALDAVGAENMHK-LVVYGSDQTHSTF-AKVCKLAGVSPANIRAL------PTSV--DANFSLSPQLLRRAVEAD 240 (499)
Q Consensus 171 ~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~-~ka~~~~G~g~~~v~~v------~~~~--~~~~~~d~~~L~~~i~~~ 240 (499)
.++++..... .|.++ ..|+++ ..|+.. .......|. .++.. +.+. ..++.+|+++|+++|++.
T Consensus 107 ~~~~~~~~~~---~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~ 179 (467)
T 2oqx_A 107 PVLIKKREQE---KGLDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_dssp HHHHHHHHHH---HCCCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred HHHhcccccc---CCCCccceEEec-ccccccchhhhhccCc---ceeeccccccccCCCCCCccCCcCHHHHHHHHHhc
Confidence 9887531110 02111 335555 577553 333344454 44332 2220 013589999999999863
Q ss_pred HHcCCccEEEEEecCCCcc-ccc---CChhHHHHHHHHhCCEEEeeccccc-hhc--------cCcc-chhhh-cCCCCC
Q 010842 241 VEAGLVPLFLCATVGTTST-TAV---DNVEPLAEVANEYGIWVHVDAAYAG-SAC--------ICPE-FRHYL-NGIERV 305 (499)
Q Consensus 241 ~~~g~~p~~vv~t~gtt~~-G~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~--------~~~~-~~~~~-~g~~~a 305 (499)
. ..++.+|+++.++|++ |.+ +++++|+++|++||+|||+|++++. ... ..+. ..... ...+.+
T Consensus 180 ~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 257 (467)
T 2oqx_A 180 G--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA 257 (467)
T ss_dssp C--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC
T ss_pred C--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC
Confidence 1 0123468888888887 665 5689999999999999999987755 221 1111 11111 001347
Q ss_pred ceeEecccccccCCCcceEEEEeCc---hhHHHhhcCCccCC--CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh
Q 010842 306 DSFSFSPHKWLLSYLDCCCLWVKQP---GLLVKALSTDPEYL--KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY 380 (499)
Q Consensus 306 Dsi~~~~hK~l~~p~~~g~l~~r~~---~~l~~~~~~~~~yl--~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~ 380 (499)
|++++++||+++.|.| |+++.+++ +.+.. +. .+. .... .+.+. ..+..+ .++...
T Consensus 258 d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~~---~~~~~~~~~-------------~~~~~-~~~~~~-~al~~~ 317 (467)
T 2oqx_A 258 DMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-CR---TLCVVQEGF-------------PTYGG-LEGGAM-ERLAVG 317 (467)
T ss_dssp SEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-HH---HHHHHTTSS-------------CCCCC-CCHHHH-HHHHHH
T ss_pred CeEEEecccccCCCCc-eEEEecChhHHHHHHH-HH---HhhhccCCc-------------ccccc-hhhhHH-HHHHHh
Confidence 8899999999988754 66666655 22211 11 110 0000 00000 011111 122211
Q ss_pred cHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC--CCCCCcchhHHH-HHHHHHHH-HhcCCEEEE
Q 010842 381 GVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP--YPHSGSADTEML-NRKLLDWV-NSTGRVYLT 455 (499)
Q Consensus 381 g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~--~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~ 455 (499)
-.+.+ ++.+++..++++++.+.|++. ++++. +.....+.+.+.. .. .+. ..+ ..++.++| .+.|+.+..
T Consensus 318 l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~l~~~L~~~~gv~~~~ 391 (467)
T 2oqx_A 318 LYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPH-IPA---DQFPAQALACELYKVAGIRAVE 391 (467)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTT-SCG---GGCHHHHHHHHHHHHHCEECEE
T ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhccc-CCc---ccccHHHHHHHHHHhcCceecc
Confidence 01222 235566678889999999887 77776 5455566666631 11 011 122 45667777 677865443
Q ss_pred eeeE-------------CCEEEEEEeccCCC-CcHHHHHHHHHHHHHHHHHHh
Q 010842 456 HTIV-------------GGLYMLRFAVGASL-TDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 456 ~~~~-------------~g~~~lRi~~~~~~-~t~~di~~l~~~l~~~~~~l~ 494 (499)
...+ .+..++|+++. .. +|++||++++++|+++.+++.
T Consensus 392 ~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 392 IGSFLLGRDPKTGKQLPCPAELLRLTIP-RATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp ESHHHHCBCTTTCSBCCCSCCEEEECCC-TTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccccccccccccCccCeEEEEec-CCCCCHHHHHHHHHHHHHHHhhhh
Confidence 2211 02368999985 66 899999999999999887643
No 153
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.86 E-value=1e-20 Score=191.48 Aligned_cols=358 Identities=11% Similarity=0.035 Sum_probs=214.8
Q ss_pred HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH-Hccc-CCcccccChhhHHHHHHHHHHHHHHcCC---
Q 010842 70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA-CFNS-VGFNWLASPASTELEIVVMDWLATMLKL--- 144 (499)
Q Consensus 70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--- 144 (499)
-.+.+.+.+.-.++........|+..-...+.++ .+.+.+.. .+.. ....|...++..++.+++.+|+.+..+.
T Consensus 14 ~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~-~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~ 92 (397)
T 3fsl_A 14 LTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQ-AVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK 92 (397)
T ss_dssp HHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCH-HHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcH-HHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence 3444445444334444443333333222222224 44555555 5544 3345666667788999887777655442
Q ss_pred CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
++.. ..++|+|||+|+..++...... . ++..|+++..+|.++...++..|. +++.+|+..+.
T Consensus 93 ~~~~------~i~~t~g~~~a~~~~~~~~~~~--~-------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~ 154 (397)
T 3fsl_A 93 QQRV------ATIQTLGGSGALKVGADFLKRY--F-------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEA 154 (397)
T ss_dssp TTCE------EEEEESHHHHHHHHHHHHHHHH--C-------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETT
T ss_pred ccce------EEEEcCCcHHHHHHHHHHHHhc--C-------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeecc
Confidence 2300 2589999999998886433211 0 456788899999999999999999 99999984323
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-ccchhh--
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHY-- 298 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~-- 298 (499)
++.+|+++|++++++. .....+++.+.++|+||.+ +++++|+++|++||+++++|++|+.+.... ......
T Consensus 155 ~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (397)
T 3fsl_A 155 TNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA 231 (397)
T ss_dssp TTEECHHHHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred CCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHH
Confidence 4799999999998742 1224578888999999999 566799999999999999999998765421 111111
Q ss_pred hcCCCCCceeEecccccccCC-CcceEEEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH
Q 010842 299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM 375 (499)
Q Consensus 299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~ 375 (499)
+.+...-..+..+.+|.++.| ..+|++++ .++..+.+.......+..... .. ...+...+
T Consensus 232 ~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~ 294 (397)
T 3fsl_A 232 IASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY--------------SS---PPNFGAQV 294 (397)
T ss_dssp HHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT--------------SS---CCSHHHHH
T ss_pred HHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc--------------CC---CCHHHHHH
Confidence 112223456777889999844 45788875 343333222111000000000 00 01222222
Q ss_pred HHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 376 VLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 376 ~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
+...+. .+.++++.++..++++++.+.|++.+ ++++.. |..+.+.|. ... .+.+.+
T Consensus 295 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~ 361 (397)
T 3fsl_A 295 VAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLL-NQRGMFSYT--GLS----------AAQVDR 361 (397)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH-HCCSSEEEC--CCC----------HHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeec-CCceEEEec--CCC----------HHHHHH
Confidence 222221 45577788888899999999998864 565442 333333331 111 233555
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+.+.|+. +.+. + |++++ . .++++|++++++|+++
T Consensus 362 ~l~~~gi~-v~~g---~----Ris~~-~-~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 362 LREEFGVY-LIAS---G----RMCVA-G-LNTANVQRVAKAFAAV 396 (397)
T ss_dssp HHHTTCEE-CCTT---C----EEEGG-G-CCTTTHHHHHHHHHHH
T ss_pred HHHhCCEE-ECCC---C----eEEEE-e-cCHhhHHHHHHHHHhh
Confidence 56666743 3332 1 99885 2 3557799999999875
No 154
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.86 E-value=2.2e-20 Score=191.98 Aligned_cols=322 Identities=12% Similarity=0.088 Sum_probs=198.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe---------
Q 010842 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL--------- 189 (499)
Q Consensus 119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~--------- 189 (499)
..|....+..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+... ++.
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~ 140 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTS-----ENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKES 140 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHSSE-----------EEECC-------
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecCcHHHHHHHHHHHhC-----------CCcccccccccc
Confidence 346666677899999999999888864321 2579999999999988876532 122
Q ss_pred -----EEEcC-CCCchhHHHHH------HHhCCCCCCeEEeeCCC-CC--CCccCHHHHHHHHHHHHHcCCccEEEEEec
Q 010842 190 -----VVYGS-DQTHSTFAKVC------KLAGVSPANIRALPTSV-DA--NFSLSPQLLRRAVEADVEAGLVPLFLCATV 254 (499)
Q Consensus 190 -----~i~~s-~~~H~s~~ka~------~~~G~g~~~v~~v~~~~-~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~ 254 (499)
.|+++ ..+|..+..++ ...|. .++.+|++. ++ +|.+|+++|++++...+ ..+.+|+++.
T Consensus 141 ~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~ 214 (444)
T 3if2_A 141 KSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSR 214 (444)
T ss_dssp CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEES
T ss_pred ccccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCC
Confidence 45544 66777666533 22344 677788764 22 36899999999864321 1345788888
Q ss_pred CCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842 255 GTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG 331 (499)
Q Consensus 255 gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~ 331 (499)
++|++|.+-| +++|+++|++||+++|+|++|+.+.... .+..........+.++.++||++....++|+++.+.+
T Consensus 215 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~- 292 (444)
T 3if2_A 215 PTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAK- 292 (444)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHH-
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEECHH-
Confidence 9999999988 8899999999999999999997532111 1111111223467888999998555567787766432
Q ss_pred hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHH----HHH-HHHHHHHHHHHHHHHHhc-
Q 010842 332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLN----LQS-HIRSDIRLAKMFEGFVKS- 405 (499)
Q Consensus 332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g----~~~-~~~~~~~~a~~l~~~L~~- 405 (499)
+...+....... +.....+...++...+.... ..+ +.++..++.+++.+.|.+
T Consensus 293 -l~~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (444)
T 3if2_A 293 -VIEAVSAMNAVV--------------------NLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQA 351 (444)
T ss_dssp -HHHHHHHHHHHH--------------------HSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc--------------------cCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222221100000 00112233333333322111 122 334445555666666654
Q ss_pred CC--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----------CEEEEEEeccCCC
Q 010842 406 DP--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----------GLYMLRFAVGASL 473 (499)
Q Consensus 406 ~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------g~~~lRi~~~~~~ 473 (499)
++ ++++..+.....+++.+.... ....++.+.|.++|+.+..+..+. +..++|++++ .
T Consensus 352 l~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~-~- 421 (444)
T 3if2_A 352 LGDYPLMIHKPEGAIFLWLWFKDLP--------ISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA-A- 421 (444)
T ss_dssp SSSSSEEEECCCBSSEEEEEETTCS--------SCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS-S-
T ss_pred cccCCceEecCCccEEEEEEcCCCC--------CCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEe-C-
Confidence 44 466664544555666665311 014567777877886554433321 1258999996 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHhcc
Q 010842 474 TDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
++++|++++++|.++.+++..+
T Consensus 422 -~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 422 -DEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHHHHHHHHHHHHcc
Confidence 8999999999999999887653
No 155
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.86 E-value=9.4e-20 Score=186.34 Aligned_cols=324 Identities=13% Similarity=0.068 Sum_probs=207.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
|....+..++.+++.+|+.+.+|.+..... .+....++|+|+++|+..++.+..+ ++..|++..++|
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y 142 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY 142 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence 444556678999999999999998641000 0001468999999999888877632 466788899999
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH------HcCCccEEEEE-ecCCCcccccCChh---HH
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV------EAGLVPLFLCA-TVGTTSTTAVDNVE---PL 268 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~------~~g~~p~~vv~-t~gtt~~G~id~l~---~I 268 (499)
..+...++..|. +++.||++++ .+|+++|++++++.. ..+..+.+|++ ..++|+||.+-+.+ +|
T Consensus 143 ~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 143 SGTLQSLHPLGC---NIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp HHHHHHHGGGTC---EEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHcCC---EEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 999999999999 9999998753 599999999986310 00112335544 67899999997755 99
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
+++|++||+++++|++|+.+.+.......... +....+.+..+.+|+++....+|+++.+++ +.+.+........
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~--l~~~l~~~~~~~~-- 292 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP--LIERVILHIQVST-- 292 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH--HHHHHHHHHHTTT--
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH--HHHHHHHHHHHhc--
Confidence 99999999999999999865432111111110 111245777899999973344799888753 2222211000000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cH----HHHHHHHHHHHHHHHHHHHHHhc-CCCeE-EEcCCCce
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GV----LNLQSHIRSDIRLAKMFEGFVKS-DPRFE-IVVPRHFA 418 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~----~g~~~~~~~~~~~a~~l~~~L~~-~~~~~-~~~~~~~~ 418 (499)
.....+..+++...+ +. +.++++.++..++++++.+.|++ .|++. +..+....
T Consensus 293 ------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~ 354 (425)
T 2r2n_A 293 ------------------LHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM 354 (425)
T ss_dssp ------------------CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSS
T ss_pred ------------------CCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceE
Confidence 001223333333333 22 33555666777888889899987 67774 44344445
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+++.+.... + . .+.+.+.+.++|+.+..+..+. +..++|++++ . .++++|++++++|.++.++.
T Consensus 355 ~~~~~~~~~~--~---~---~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~-~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 355 FLWIKVKGIN--D---V---KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS-S-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EEEEEETTCS--C---C---HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECS-S-CCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCC--C---H---HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeC-C-CCHHHHHHHHHHHHHHHHHh
Confidence 5666664321 0 0 1224566667786554443332 2468999985 3 58999999999999987654
No 156
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.86 E-value=1e-20 Score=186.65 Aligned_cols=277 Identities=14% Similarity=0.137 Sum_probs=183.3
Q ss_pred HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH----HHhC
Q 010842 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC----KLAG 209 (499)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~----~~~G 209 (499)
+.+.+++++|.+.. +++++||+|+..++.+... ++..|+++..+|.++...+ +..|
T Consensus 3 l~~~la~~~g~~~~---------i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~g 62 (331)
T 1pff_A 3 LEGKIAKLEHAEAC---------AATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKFG 62 (331)
T ss_dssp HHHHHHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHhCCCeE---------EEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhcC
Confidence 34558899998733 7777789999888876521 4567888999999987765 4578
Q ss_pred CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccch
Q 010842 210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAGS 288 (499)
Q Consensus 210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~~ 288 (499)
+ +++.+|. +|+++|+++++++ +.+|+++.++|++|.+.|+++|.++|++ +|+++++|++|+.+
T Consensus 63 ~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~ 126 (331)
T 1pff_A 63 V---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASP 126 (331)
T ss_dssp C---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHH
T ss_pred C---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCccc
Confidence 8 8888875 3778888887643 4478889999999999999999999999 99999999999876
Q ss_pred hccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCC
Q 010842 289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTG 365 (499)
Q Consensus 289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 365 (499)
....+. . ..+|.+++++||+++.|.+ +|+++.++++.. +.+.. ...|. +
T Consensus 127 ~~~~~~----~---~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~-~~l~~~~~~~~--------------------~ 178 (331)
T 1pff_A 127 ILTNPL----D---LGVDIVVHSATKYINGHTDVVAGLVCSRADIIA-KVKSQGIKDIT--------------------G 178 (331)
T ss_dssp HHCCGG----G---GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHH-HHHHTCCCCCC--------------------C
T ss_pred ccCChh----h---cCCcEEEEECccccCCCCCceEEEEEeCcHHHH-HHHHHHHHhhc--------------------C
Confidence 543221 1 1389999999999998876 788887763333 22221 11100 0
Q ss_pred CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CeEEEcC---CCceEEEEEecCCC
Q 010842 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP--------------RFEIVVP---RHFALVCFRLNPYP 428 (499)
Q Consensus 366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--------------~~~~~~~---~~~~~v~f~~~~~~ 428 (499)
.....+..|..+..+ +.+..+.++..++++.+.+.+++.+ ++++..+ ...++++|.+.+
T Consensus 179 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (331)
T 1pff_A 179 AIISPHDAWLITRGT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG-- 254 (331)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS--
T ss_pred CCCCHHHHHHHHcCc--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--
Confidence 011234445443333 3344445555556666666655433 2322211 135677887652
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEee------------------------eECC--EEEEEEeccCCCCcHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHT------------------------IVGG--LYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------------------~~~g--~~~lRi~~~~~~~t~~di~~l 482 (499)
...+.+.+.+.|+...... ...| ..++|+++. ..+++++|+.+
T Consensus 255 ----------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~t~~~i~~l 323 (331)
T 1pff_A 255 ----------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVG-CENVQDIIDDL 323 (331)
T ss_dssp ----------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECC-SSCHHHHHHHH
T ss_pred ----------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEe-cCCHHHHHHHH
Confidence 2345666667776332210 0011 368999995 78999999999
Q ss_pred HHHHHHH
Q 010842 483 WELIMEG 489 (499)
Q Consensus 483 ~~~l~~~ 489 (499)
+++|+++
T Consensus 324 ~~~l~~~ 330 (331)
T 1pff_A 324 KQALDLV 330 (331)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9998753
No 157
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.85 E-value=1e-19 Score=184.10 Aligned_cols=293 Identities=13% Similarity=0.068 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+++++++|.+.+ ..++|+|||+|+..++.+++... + ++.+|+.+...|.++..++...
T Consensus 87 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~-~-------~~~vi~~~~~y~~~~~~~~~~~ 151 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT-G-------RKKFVAAMRGFSGRTMGSLSVT 151 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh-C-------CCeEEEEcCCcCCCchhhhhhc
Confidence 4555666779999876543 46999999999999998765321 0 2334444444466676677776
Q ss_pred CCCCCCeE---EeeCCCCCC-C-ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEE
Q 010842 209 GVSPANIR---ALPTSVDAN-F-SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWV 279 (499)
Q Consensus 209 G~g~~~v~---~v~~~~~~~-~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~l 279 (499)
|. .++ .+|+..+-. . ..|+++|+++|+++ +.+|+++..++++|.+.| +++|+++|++||+++
T Consensus 152 g~---~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~l 222 (395)
T 1vef_A 152 WE---PKYREPFLPLVEPVEFIPYNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALL 222 (395)
T ss_dssp CC---HHHHGGGCSCSSCEEEECTTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEE
T ss_pred CC---cccccccCCCCCCeeEeCCCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEE
Confidence 66 321 112211100 0 25899999988642 446777777788999877 999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 359 (499)
|+|++|+++............++ ..|++++ ||+++.+.++|+++++++ +.+.+... .+
T Consensus 223 i~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~g~~~G~~~~~~~--~~~~l~~~-~~---------------- 280 (395)
T 1vef_A 223 ILDEIQTGMGRTGKRFAFEHFGI-VPDILTL--AKALGGGVPLGVAVMREE--VARSMPKG-GH---------------- 280 (395)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCEEEEEEHH--HHHTSCTT-SS----------------
T ss_pred EEEecccCCccCCchhHhhhcCC-CCCEEEE--cccccCCCceEEEEehHH--HHhhhccC-Cc----------------
Confidence 99999986422111111111222 3687754 999998888999998764 32322210 00
Q ss_pred cccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEcCCCceEEEEEecCCCCCCcch
Q 010842 360 WQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR--FEIVVPRHFALVCFRLNPYPHSGSAD 434 (499)
Q Consensus 360 ~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~--~~~~~~~~~~~v~f~~~~~~~~~~~~ 434 (499)
..+.....+.. ..+++.+.. +++.++..++++++.+.|++++. +... ++..+++++.+...
T Consensus 281 ---~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~------- 346 (395)
T 1vef_A 281 ---GTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEK------- 346 (395)
T ss_dssp ---CCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSC-------
T ss_pred ---CCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcCh-------
Confidence 00111123333 333443322 34677888899999999988743 2111 23445677776432
Q ss_pred hHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 435 TEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 435 ~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..++.+.|. ++|+.+ .+. +..++|+++. ..++++|+++++++|+++.
T Consensus 347 ----~~~l~~~l~~~~gi~v-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 347 ----AAPYIARLEKEHRVLA-LQA---GPTVIRFLPP-LVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ----SHHHHHHHHHHHCEEC-EES---STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHCCeEE-ecC---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHh
Confidence 245667777 678543 332 3467999984 7789999999999998764
No 158
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.76 E-value=3.9e-23 Score=209.16 Aligned_cols=327 Identities=12% Similarity=0.093 Sum_probs=211.9
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+.+...+......|... ..++++++.+|+.+.+|.+... ...++|+||++|+..++.+..+
T Consensus 49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~---------- 111 (392)
T 3b1d_A 49 VKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK---------- 111 (392)
Confidence 4444444443323334332 6789999999999888843211 1358999999999888877643
Q ss_pred cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccC
Q 010842 186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..|+++..+|.++..+++..|. +++.+|.+ .+++|.+|+++|++++++ ++ .+|+++.++|++|.+-
T Consensus 112 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~ 181 (392)
T 3b1d_A 112 -EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVENDV------KLYLLCNPHNPGGRVW 181 (392)
Confidence 345688899999999999999999 99999985 334578999999999873 33 2566788999999985
Q ss_pred C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842 264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA 336 (499)
Q Consensus 264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~ 336 (499)
+ +++|+++|++||+++++|++|+.+........... ......+.++.+.+|+++ ....+|+++.+++... +.
T Consensus 182 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~~ 260 (392)
T 3b1d_A 182 EREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC-AQ 260 (392)
Confidence 4 99999999999999999999987653221111111 111124567788999997 4456888887654322 22
Q ss_pred hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEc
Q 010842 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVV 413 (499)
Q Consensus 337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~ 413 (499)
+....... +.... ..+..+++...+ +.+.+++..++..++++++.+.|++ +|++++..
T Consensus 261 ~~~~~~~~----------------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 321 (392)
T 3b1d_A 261 FKHQQLVN----------------NHHEV---SSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK 321 (392)
Confidence 21110000 00000 112222222222 3456777778888889999999987 78887653
Q ss_pred CCCceEEE-EEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 414 PRHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 414 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+..+.+. +.+.... ....++.++|. +.|+.+..+..+. +..++|++++ .++++|++++++|.++
T Consensus 322 -~~~~~~~~i~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 322 -PQGTYLIWLDFSDYG--------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA---APKSLVEEICKRIVCC 389 (392)
Confidence 4444443 4443210 11345677775 5676554433332 4578999986 3578999999999876
Q ss_pred HH
Q 010842 490 AD 491 (499)
Q Consensus 490 ~~ 491 (499)
.+
T Consensus 390 l~ 391 (392)
T 3b1d_A 390 LP 391 (392)
Confidence 54
No 159
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.85 E-value=5.7e-20 Score=188.68 Aligned_cols=326 Identities=11% Similarity=0.051 Sum_probs=193.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST 200 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s 200 (499)
|..++...++|++ +++++|.+. .+++++||+|+..++.+.+....... ...++..|+++..+|.+
T Consensus 58 ~~~~~~~~~l~~~----la~~~g~~~---------~i~~~sGt~a~~~al~~l~~~~~~~~--~~~~gd~Vi~~~~~~~~ 122 (437)
T 3bb8_A 58 LTTGRFNDAFEKK----LGEYLGVPY---------VLTTTSGSSANLLALTALTSPKLGVR--ALKPGDEVITVAAGFPT 122 (437)
T ss_dssp CBSCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHTTCGGGGGG--SCCTTCEEEECSSSCHH
T ss_pred cCCChHHHHHHHH----HHHHHCCCc---------EEEeCCHHHHHHHHHHHhhhcccccc--cCCCcCEEEECCCCcHH
Confidence 3445666666666 778888763 38999999999988877621000000 00145678999999999
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
+..++...|+ +++.+|++++ ++.+|+++|+++++++ +.+|++++ ++|...|+++|+++|+++|+++|
T Consensus 123 ~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li 189 (437)
T 3bb8_A 123 TVNPTIQNGL---IPVFVDVDIP-TYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLI 189 (437)
T ss_dssp HHHHHHHTTC---EEEECCEETT-TTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCC---EEEEEeccCc-cCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEE
Confidence 9999999999 9999998753 4799999999988653 33566654 46888999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccCCCC----CCCC-----
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEYLKN----KPSE----- 350 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~yl~~----~~~~----- 350 (499)
+|+||+.+.... ... . + ...|.++++.+|....|.+ +|+++.+++ .+...+.....+-.. ...+
T Consensus 190 ~D~a~~~g~~~~--~~~-~-~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (437)
T 3bb8_A 190 EDCCDALGSTYD--GKM-A-G-TFGDIGTVSFYPAKHITMGEGGAVFTQSA-ELKSIIESFRDWGRDCYCAPGCDNTCKK 263 (437)
T ss_dssp EECTTCTTCEET--TEE-T-T-SSSSEEEEECSTTSSSCCSSCEEEEESCH-HHHHHHHHHHBTTBCC------------
T ss_pred EECccccCceEC--Cee-c-c-cccCEEEEECcCCcCCCCCCeEEEEeCCH-HHHHHHHHHHHhCccccccccccccccc
Confidence 999998543321 111 1 1 1257766663322222333 455555433 332221110011000 0000
Q ss_pred -----CCCcc-cC-CCcc---cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----
Q 010842 351 -----SNSVV-DF-KDWQ---VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----- 415 (499)
Q Consensus 351 -----~~~~~-~~-~~~~---~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----- 415 (499)
..... .+ ..++ ....-+...+...+++..+ +.+.+.+++..++++++.+.|++++++.++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 341 (437)
T 3bb8_A 264 RFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSD 341 (437)
T ss_dssp ----CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEE
T ss_pred ccccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCc
Confidence 00000 00 0000 1111122344444444443 555777888899999999999998887665321
Q ss_pred -CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------EC--C--------------EEEEEEecc
Q 010842 416 -HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VG--G--------------LYMLRFAVG 470 (499)
Q Consensus 416 -~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~--g--------------~~~lRi~~~ 470 (499)
....+.+.+.... +....++.+.|.++|+.+-.... +. + ...+|+++
T Consensus 342 ~~~~~~~~~~~~~~-------~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~- 413 (437)
T 3bb8_A 342 PSWFGFPITLKEDS-------GVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGI- 413 (437)
T ss_dssp CCCSSEEEEECGGG-------SSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECC-
T ss_pred eeeEEEEEEECCcC-------cCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecC-
Confidence 1112333332110 00145677888888864322100 10 0 13599998
Q ss_pred CCCCcHHHHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~~~~ 490 (499)
++.+|++||++++++|+++.
T Consensus 414 ~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 414 YPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp STTCCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999998864
No 160
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.85 E-value=1.1e-19 Score=183.55 Aligned_cols=217 Identities=12% Similarity=0.139 Sum_probs=156.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.|...++| +++++++|.+. .+++++||+|+..++.+... ++..|+++...|.+...
T Consensus 58 ~~~~~~l~----~~la~~~g~~~---------~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~ 113 (389)
T 3acz_A 58 NPTVEQFE----EMVCSIEGAAG---------SAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVS 113 (389)
T ss_dssp CHHHHHHH----HHHHHHHTCSE---------EEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHH
T ss_pred ChHHHHHH----HHHHHHhCCCe---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence 44444444 45888888863 37888899999888776521 45678889999998766
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV 279 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l 279 (499)
. ++..|+ +++.+|. .|+++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++|+++
T Consensus 114 ~~~~~~~~~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l 177 (389)
T 3acz_A 114 LFTHWLPRFGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARL 177 (389)
T ss_dssp HHHHHHHHTTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHcCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence 5 577888 8888875 3889999988653 347888999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842 280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357 (499)
Q Consensus 280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 357 (499)
++|++|+.+....+ .. ..+|.++.+.||+++.|.+ +|+++.++++.. +.+.....+.
T Consensus 178 ivD~~~~~~~~~~~----~~---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~-~~l~~~~~~~------------- 236 (389)
T 3acz_A 178 VVDATFTSPCFLKP----LE---LGADIALHSVSKYINGHGDVIGGVSSAKTAEDI-ATIKFYRKDA------------- 236 (389)
T ss_dssp EEECTTTCTTTCCG----GG---TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHH-HHHHHHHHHH-------------
T ss_pred EEECCCccccccCc----cc---cCCeEEEECChhhccCCCCceeEEEEECcHHHH-HHHHHHHHhc-------------
Confidence 99999987643221 11 1489999999999999877 688888762322 2111100000
Q ss_pred CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE 410 (499)
Q Consensus 358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 410 (499)
+........|+.++.+ +.+..++++..++++.+.+.|++.+.++
T Consensus 237 -------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~ 280 (389)
T 3acz_A 237 -------GSLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIV 280 (389)
T ss_dssp -------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred -------CCCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 0011345667666655 4566677888888899999998876654
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=8.4e-20 Score=185.86 Aligned_cols=347 Identities=11% Similarity=0.049 Sum_probs=211.3
Q ss_pred CCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh
Q 010842 83 GITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT 162 (499)
Q Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg 162 (499)
...+..+..+.+.-+..+.++ .+.+.+..........|...++..++.+++.+|+.+..+.... ...++|+||
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~-~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~------~~i~~t~g~ 110 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALP-SVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY------ISAIATPGG 110 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCH-HHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHH
T ss_pred ceEeccccCccCCCCCcCChH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc------CcEEEcCcc
Confidence 344555555554433333333 4455555533222345655667788999988888777654311 146999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
|+|+..++.+..+ ++..|+++.++|.++...++..|. +++.+|++++ +|.+|+++|++++++...
T Consensus 111 ~~al~~~~~~~~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~~ 175 (413)
T 3t18_A 111 TGAIRSAIFSYLD-----------EGDPLICHDYYWAPYRKICEEFGR---NFKTFEFFTD-DFAFNIDVYKEAIDEGIR 175 (413)
T ss_dssp HHHHHHHHHHHCC-----------SSCEEEEESSCCTHHHHHHHHHTC---EEEEECCBCT-TSSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------CCCEEEECCCCcccHHHHHHHhCC---eEEEeeccCC-CCCcCHHHHHHHHHHHhh
Confidence 9999888876532 567788899999999999999999 9999998544 379999999999986422
Q ss_pred cCCccEEEEEecC-CCcccccCChhHHH---HHHH------HhCCEEEeeccccchhccCccchhhh---cCCCCCc---
Q 010842 243 AGLVPLFLCATVG-TTSTTAVDNVEPLA---EVAN------EYGIWVHVDAAYAGSACICPEFRHYL---NGIERVD--- 306 (499)
Q Consensus 243 ~g~~p~~vv~t~g-tt~~G~id~l~~I~---~ia~------~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aD--- 306 (499)
.+ ...+++++.+ +|+||.+-|.+++. ++|+ +||+++++|++|+++........... .++. .+
T Consensus 176 ~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~ 253 (413)
T 3t18_A 176 DS-DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLP-RNLFV 253 (413)
T ss_dssp HC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCC-TTEEE
T ss_pred cC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcC-CCeeE
Confidence 11 1236777777 89999997766555 5555 89999999999977654322112211 2221 23
Q ss_pred eeEecccccccCC-CcceEEEEe--CchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-
Q 010842 307 SFSFSPHKWLLSY-LDCCCLWVK--QPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV- 382 (499)
Q Consensus 307 si~~~~hK~l~~p-~~~g~l~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~- 382 (499)
.++.+.+|.++.| ..+|+++.. +++.. +.+.....+.... .......+...+....+..
T Consensus 254 i~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 254 VVAFSMSKSHTAYGLRSGAAVGISSSKEII-EEFEASLAHSARC----------------NWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEEEESCHHHH-HHHHHHHHHHHHH----------------HTSSCCHHHHHHHHHTTSHH
T ss_pred EEEEecCccCCCcCcCcEEEEEecCCHHHH-HHHHHHHHHhhhc----------------cccCCChHHHHHHHHHhcCh
Confidence 5566999999844 557888762 43322 2221110110000 0001123444444444432
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE-EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE
Q 010842 383 ------LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT 455 (499)
Q Consensus 383 ------~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 455 (499)
+..+++.++..++++++.+.|++. ++++.. +..+.+. +... . ..++.+.|.++|+.+ .
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~~~~~~~~~~--~----------~~~~~~~l~~~gv~v-~ 381 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIP-YFGGFFTFIPTD--K----------AFDIVKDLEKENIFT-I 381 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBC-CCSSSCEEEECS--C----------HHHHHHHHHHTTEEC-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccC-CCceEEEEeCCC--C----------HHHHHHHHHhCCEEE-e
Confidence 233455667778888899999887 777653 4434333 3331 1 345667777778544 3
Q ss_pred eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 456 HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 456 ~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
+ +..++|++++ .. +++++ ++.|.++.+++.
T Consensus 382 ~----g~~~iRis~~-~~-~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 382 P----SAKGIRVAIC-GV-GEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp E----CSSEEEECTT-TS-CGGGH---HHHHHHHHHHHH
T ss_pred c----CCCceEEEEe-eC-CHHHH---HHHHHHHHHHHh
Confidence 3 2457999985 32 33343 556665555543
No 162
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.84 E-value=2.3e-19 Score=183.74 Aligned_cols=308 Identities=12% Similarity=0.043 Sum_probs=201.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS 199 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~ 199 (499)
.|...++..++++++.+|+.+.++.+.+ ..++|+|+++++.. +....+ ++..|+++...|.
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y~ 153 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSYP 153 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCCT
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCCH
Confidence 4555566789999988888865555543 46899999887654 332211 4667888999999
Q ss_pred hHHHHHHHhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhH
Q 010842 200 TFAKVCKLAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEP 267 (499)
Q Consensus 200 s~~ka~~~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~ 267 (499)
++..+++..|... .+++.+|++.++++..|++. ...+.+|+++.++|+||.+- ++++
T Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~ 222 (432)
T 3ei9_A 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLTQ 222 (432)
T ss_dssp HHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999999888411 16888998765445555432 11234677789999999985 4677
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccccc-CCCcceEEEEeCchh------HHHhhc
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGL------LVKALS 338 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~------l~~~~~ 338 (499)
|+++|++||+++++|++|+.+.... ..... ..+....+.++.+++|+++ ....+|+++.++... +...+.
T Consensus 223 l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 301 (432)
T 3ei9_A 223 LVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFN 301 (432)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHH
Confidence 7888999999999999998764321 11111 1122235678899999997 445689888776431 011111
Q ss_pred CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842 339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415 (499)
Q Consensus 339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 415 (499)
....+.. .....+...+++..+ +.+.++++.++..++++++.+.|++. ++++..+.
T Consensus 302 ~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 360 (432)
T 3ei9_A 302 RIICTCF--------------------NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGK 360 (432)
T ss_dssp HHHHHSC--------------------CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECS
T ss_pred HHhcccc--------------------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCC
Confidence 0000000 011234444444444 33567788888999999999999988 88877555
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
....+.+.+.... ..++.+++.++ |+.+..+..+. +..++|+++. +++++|+++++.|++....
T Consensus 361 ~~~~~~~~~~~~~----------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~l~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 361 NAPYVWVHFPNQS----------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF---GHRENILEACRRFKQLYKH 427 (432)
T ss_dssp SSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHTT
T ss_pred cceEEEEECCCCC----------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHhhh
Confidence 5566666665322 34556666554 75444433332 3578999985 5899999999999886543
No 163
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=1.4e-20 Score=192.08 Aligned_cols=360 Identities=11% Similarity=-0.009 Sum_probs=216.2
Q ss_pred HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC---
Q 010842 69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL--- 144 (499)
Q Consensus 69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--- 144 (499)
.-.+.+.+.+.-.++..+.....|...-...+.+ ..+.+.+...+.. ....|....+..++.+++.+++....+.
T Consensus 36 i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~-~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 114 (420)
T 4f4e_A 36 ILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLL-RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA 114 (420)
T ss_dssp HHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCC-HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCc-HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc
Confidence 3455555554333444444333322222122222 3445555555543 3345666677788999988887655442
Q ss_pred CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
++. ...++|+|||+|+..++...... . ++..|+++.++|.++...++..|. +++.+|+..+.
T Consensus 115 ~~~------~~i~~t~G~t~al~~~~~~~~~~--~-------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~ 176 (420)
T 4f4e_A 115 AGR------VVTAQALGGTGALKIGADFLRTL--N-------PKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAK 176 (420)
T ss_dssp TTC------EEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETT
T ss_pred cCc------eEEEECCccHHHHHHHHHHHHHh--C-------CCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccc
Confidence 220 03589999999998885432111 0 466788899999999999999999 99999983223
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchh--h
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRH--Y 298 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~--~ 298 (499)
++.+|+++|++.+++. .....+++.+.++|+||.+ +++++|+++|++||+++++|++|+++....+ .... .
T Consensus 177 ~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 253 (420)
T 4f4e_A 177 TNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRL 253 (420)
T ss_dssp TTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred cCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHH
Confidence 4799999999998632 1224578889999999999 5577999999999999999999987654321 1111 1
Q ss_pred hcCCCCCceeEecccccccCC-CcceEEEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH
Q 010842 299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM 375 (499)
Q Consensus 299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~ 375 (499)
..+....+.++.+.+|.++.| ..+|++++ .++....+.......+..... .. ...+..++
T Consensus 254 ~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~ 316 (420)
T 4f4e_A 254 FAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNY--------------SN---PPTHGGAI 316 (420)
T ss_dssp HHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT--------------SS---CCSHHHHH
T ss_pred HHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc--------------CC---CCHHHHHH
Confidence 112233567788999999843 55788764 333322111111000000000 00 01222232
Q ss_pred HHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842 376 VLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD 444 (499)
Q Consensus 376 ~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~ 444 (499)
+...+. .+.++++.++..++++++.+.|+++ +++++.. |..+.+.|. ... .+.+.+
T Consensus 317 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~--~~~----------~~~~~~ 383 (420)
T 4f4e_A 317 VAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFIN-AQRGMFSYS--GLT----------SAQVDR 383 (420)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH-HSCSSEEEC--CCC----------HHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEC-CCccEEEEe--CCC----------HHHHHH
Confidence 222221 3446778888889999999999887 4565443 333434331 111 133445
Q ss_pred HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+.+.|+. +.+. .|++++ ..++++|++++++|+++.
T Consensus 384 ~l~~~gI~-v~~~-------~Ris~~--~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 384 LREEFGIY-AVST-------GRICVA--ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp HHHHHCEE-CCTT-------SEEEGG--GCCTTTHHHHHHHHHHHH
T ss_pred HHHhCCEE-ecCC-------CeEEEe--cCCHHHHHHHHHHHHHHh
Confidence 55566743 3331 399985 236677999999998864
No 164
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.84 E-value=3.2e-19 Score=177.35 Aligned_cols=280 Identities=9% Similarity=-0.039 Sum_probs=190.4
Q ss_pred HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842 133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP 212 (499)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~ 212 (499)
++++++++++|.+.+ ..++|+|+|+|+..++.+.. +..|+++..+|.++..+++..|.
T Consensus 54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~-- 111 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH-- 111 (350)
T ss_dssp HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence 345568889998654 36899999999988877653 33588888999999999999999
Q ss_pred CCeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-CEEEeeccccchhc
Q 010842 213 ANIRALPT-SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-IWVHVDAAYAGSAC 290 (499)
Q Consensus 213 ~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-~~lhvD~A~g~~~~ 290 (499)
+++.+|+ ++.+ .+++ + .+.+|+++.++|+||.+-|+++|.++++.++ .++++|++|+.+..
T Consensus 112 -~~~~v~~~~~~~--~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~ 174 (350)
T 3fkd_A 112 -EVCFYPSNEDIG--EADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT 174 (350)
T ss_dssp -EEEEEETTSCGG--GSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred -eEEEEecCCccc--cCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence 9999999 6533 3444 1 2346788999999999999999999999876 79999999976543
Q ss_pred cCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842 291 ICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK 369 (499)
Q Consensus 291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 369 (499)
..+.... ..+....+.++.+++|+++. ...+|+++. +++.. +.+....... ...
T Consensus 175 ~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~~~----------------------~~~ 229 (350)
T 3fkd_A 175 EEVIRPA-DIKGRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFM-KRVAAFSTPW----------------------AVN 229 (350)
T ss_dssp SCCCCGG-GGTTCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHH-HHHHTTCCTT----------------------CSC
T ss_pred CcchhhH-HhhcCCCEEEEecCchhccCcchheEeEEe-CHHHH-HHHHHhCCCC----------------------CCC
Confidence 2211111 11122345778899999984 466888887 44433 2222111000 112
Q ss_pred cHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh
Q 010842 370 SLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS 448 (499)
Q Consensus 370 al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~ 448 (499)
.+..+++...+.... +.+.+++..++++++.+.|+++|++++. ++..+.+.+++.... ..++.++|.+
T Consensus 230 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~l~~~L~~ 298 (350)
T 3fkd_A 230 ALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGT----------AAELKKYMLE 298 (350)
T ss_dssp HHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCC----------HHHHHHHHHH
Confidence 344455544442222 3334445558889999999999999875 555566667775421 4567788887
Q ss_pred -cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842 449 -TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD 491 (499)
Q Consensus 449 -~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~ 491 (499)
.|+.+..+..+. +..++|++++ +.+++++++++|+++.+
T Consensus 299 ~~gi~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 299 EYNMLIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLE 340 (350)
T ss_dssp TTCEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred HCCEEEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 775544433332 2568999985 78899999999988764
No 165
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.84 E-value=5.5e-20 Score=186.86 Aligned_cols=287 Identities=11% Similarity=0.088 Sum_probs=194.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|++ +++++|.+.. ++++|||+|+..++.+... ++..|+++...|.+..
T Consensus 80 ~~p~~~~le~~----lA~l~g~~~~---------i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~ 135 (415)
T 2fq6_A 80 GTLTHFSLQQA----MCELEGGAGC---------VLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQ 135 (415)
T ss_dssp CCHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHH
T ss_pred CCchHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 45666667666 8888887543 7889999999888775421 4667888999998877
Q ss_pred HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hC
Q 010842 203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YG 276 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~ 276 (499)
..+ +..|+ +++.++.+ |+++|+++|++++ .+|++..++|++|.+.|+++|+++|++ +|
T Consensus 136 ~~~~~~l~~~G~---~v~~v~~~-------d~~~le~ai~~~t------klV~~e~~~NptG~v~dl~~I~~la~~~~~g 199 (415)
T 2fq6_A 136 DFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIVAAVRSVVPD 199 (415)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------CGGGGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhhccCC------cEEEEECCCCCCCEeecHHHHHHHHHhhcCC
Confidence 655 34678 88888753 7889999886543 478889999999999999999999999 99
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
+++|+|++|+.+....| ... .+|.++.++||+++.+.+ .|+++.++. .+. .+......
T Consensus 200 ~~livD~a~a~~~~~~p----~~~---g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~-~l~~~~~~----------- 259 (415)
T 2fq6_A 200 AIIMIDNTWAAGVLFKA----LDF---GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWE-QLRENAYL----------- 259 (415)
T ss_dssp CEEEEECTTTTTTSSCG----GGG---TCSEEEEETTTTTTCSSSCCCEEEEECTT-THH-HHHHHHHH-----------
T ss_pred CEEEEECCCcccccCCc----ccc---CCeEEEEeCccccCCCCCceEEEEEeCHH-HHH-HHHHHHHh-----------
Confidence 99999999986532222 111 489999999999997754 688877654 222 11110000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC----------------CCc
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP----------------RHF 417 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~----------------~~~ 417 (499)
.+........|..++. .+.+..++++..++++.+.+.|++.|.+.-+ .+ ...
T Consensus 260 ---------~G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g 328 (415)
T 2fq6_A 260 ---------MGQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSS 328 (415)
T ss_dssp ---------TTCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCC
T ss_pred ---------cCCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCc
Confidence 0111123455655544 3677788888899999999999998876533 21 135
Q ss_pred eEEEEEecCC-CCCCcchhHHHHHHHHHHHHhc------CCE---EEE--e---ee-E----CC--EEEEEEeccCCCCc
Q 010842 418 ALVCFRLNPY-PHSGSADTEMLNRKLLDWVNST------GRV---YLT--H---TI-V----GG--LYMLRFAVGASLTD 475 (499)
Q Consensus 418 ~~v~f~~~~~-~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~--~---~~-~----~g--~~~lRi~~~~~~~t 475 (499)
++++|.+.+. . .....++++.+... |.+ ... + +. . .| ...+|+|++ ..++
T Consensus 329 ~i~sf~l~g~~~-------~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G-~e~~ 400 (415)
T 2fq6_A 329 GLFSFVLKKKLN-------NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG-LEDV 400 (415)
T ss_dssp SEEEEEESSCCC-------HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECC-SSCH
T ss_pred eEEEEEECCCCC-------HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEec-CCCH
Confidence 6888888642 1 12244555544211 211 111 1 00 0 12 368999996 8889
Q ss_pred HHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIME 488 (499)
Q Consensus 476 ~~di~~l~~~l~~ 488 (499)
+++|+.+.++|++
T Consensus 401 ~d~i~~l~~al~~ 413 (415)
T 2fq6_A 401 DDLIADLDAGFAR 413 (415)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988864
No 166
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.84 E-value=1.4e-19 Score=186.30 Aligned_cols=308 Identities=13% Similarity=0.039 Sum_probs=191.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FA 202 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ 202 (499)
.+....+|...++++++++|.+... ++++|||+||..++.+.++ ++..|+++..+|.+ +.
T Consensus 86 ~~~~~~~e~~a~~~la~~~g~~~~~--------v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~ 146 (447)
T 3h7f_A 86 CEHVDVVENLARDRAKALFGAEFAN--------VQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLT 146 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGG
T ss_pred cHHHHHHHHHHHHHHHHHcCCCceE--------EEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccc
Confidence 3444456665558999999987642 4488999999988877643 56678888888765 21
Q ss_pred HH--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 203 KV--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 203 ka--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.. ....|.+. .++.+|++++ ++.+|+++|++++.+.+ |.+|+++.++++++. ++++|+++|++||+++|
T Consensus 147 ~~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli 217 (447)
T 3h7f_A 147 HGMRLNFSGKLY-ENGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLL 217 (447)
T ss_dssp GTCTTSHHHHSS-EEEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEE
T ss_pred hhhhhhhcCCee-EEEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEE
Confidence 11 12222210 4556666643 47899999999997532 236666677776665 99999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842 281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD 359 (499)
Q Consensus 281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 359 (499)
+|++|+.+......+... ++.+|+++.++||++++|.+ |+++.++. .. +.+.. ..++..
T Consensus 218 ~Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~~-~~-~~l~~~~~~~~~-------------- 277 (447)
T 3h7f_A 218 VDMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQQ-YA-KAINSAVFPGQQ-------------- 277 (447)
T ss_dssp EECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECGG-GH-HHHHHHHTTTTC--------------
T ss_pred EECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECHH-HH-HHHhhhcCCccc--------------
Confidence 999975543322211111 23589999999999987765 77777653 22 22211 011110
Q ss_pred cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcC-CCceEEEEEecCCCCCCc
Q 010842 360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVP-RHFALVCFRLNPYPHSGS 432 (499)
Q Consensus 360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~-~~~~~v~f~~~~~~~~~~ 432 (499)
+... ....+.+++.....++++++.++..++++++.+.|++. ++++++.. ...+.+.+.+.+.+.
T Consensus 278 -----~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 349 (447)
T 3h7f_A 278 -----GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL--- 349 (447)
T ss_dssp -----SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC---
T ss_pred -----CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC---
Confidence 0011 12333444444445578889999999999999999876 58888752 344556666544220
Q ss_pred chhHHHHHHHHHHHHhcCCEEEE---ee---eECCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHH
Q 010842 433 ADTEMLNRKLLDWVNSTGRVYLT---HT---IVGGLYMLRFAVGA---SLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 433 ~~~~~~~~~l~~~l~~~g~~~~~---~~---~~~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~ 492 (499)
....+.+.+.+.|..+.. +. ......++|+++.. ...+++|++++++.|.++.++
T Consensus 350 -----~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 350 -----DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp -----CHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred -----CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 023344445555744321 11 11223569998631 125789999999999887654
No 167
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=2.7e-19 Score=180.75 Aligned_cols=295 Identities=13% Similarity=0.104 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCCchhHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~H~s~~ka~~ 206 (499)
....++.+++++++|. +. .++++|||+|+..++.+++...... .|. ++..|++...+|.+....+.
T Consensus 78 ~~~~~l~~~la~~~g~-~~--------v~~~~~gt~a~~~al~~~~~~~~~~---~~~~~~~~~vi~~~~~~~~~~~~~~ 145 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTNK-EM--------VLPMNTGAEAVETAIKTARRWAYDV---KKVEANRAEIIVCEDNFHGRTMGAV 145 (392)
T ss_dssp TTHHHHHHHHHHHHTC-SE--------EEEESSHHHHHHHHHHHHHHHHHHT---SCCCTTCCEEEEETTCCCCSSHHHH
T ss_pred HHHHHHHHHHHHhcCC-CE--------EEEeCcHHHHHHHHHHHHHHhhhhc---cCCCCCCcEEEEEcCCcCCCCHhhh
Confidence 3445566779999983 32 4999999999999998876531110 011 24467777777765444443
Q ss_pred HhCCC-C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHH
Q 010842 207 LAGVS-P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVA 272 (499)
Q Consensus 207 ~~G~g-~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia 272 (499)
.++.. . ..+..++. .|+++|+++++++ +.+|+++.++|++|.+.| +++|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~ 212 (392)
T 3ruy_A 146 SMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVC 212 (392)
T ss_dssp HTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHH
T ss_pred hccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHH
Confidence 33221 0 01333332 2899999998733 458888889999999988 99999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
++||+++|+|++|+++............++ ..|.++++ |++... ...|+++.+++ +.+.+.. ....
T Consensus 213 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~~--~~~~~~~---~~~~----- 279 (392)
T 3ruy_A 213 KKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANRD--ILGVFEP---GSHG----- 279 (392)
T ss_dssp HTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECHH--HHTTCCT---TSSC-----
T ss_pred HHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECHH--HHhhhcc---CCcC-----
Confidence 999999999999975432211111111222 36888876 987653 45888887552 2121111 0000
Q ss_pred CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEcCCCceEEEEEecCCCC
Q 010842 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD--PRFEIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~ 429 (499)
.+.....+...++...+.....++..++..++++++.+.|+++ +.+... ++..+++.+.+.. .
T Consensus 280 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~-~- 344 (392)
T 3ruy_A 280 ------------STFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNE-P- 344 (392)
T ss_dssp ------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESS-C-
T ss_pred ------------CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcc-h-
Confidence 0111223444444433322122567788889999999999887 334433 3445666676643 2
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
..++.+.|.++|+. +.+. +..++|+++. ..+|++|+++++++|+++.
T Consensus 345 ---------~~~l~~~l~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 345 ---------ARPYCEQLKAAGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ---------SHHHHHHHHTTTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHCCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 35677778888843 3322 2467999984 7789999999999998864
No 168
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.84 E-value=9.9e-20 Score=185.10 Aligned_cols=249 Identities=14% Similarity=0.106 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL--- 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~--- 207 (499)
..++.+++++++|.+. .++++||++|+..++.+... ++..|+++...|.+....+..
T Consensus 83 ~~~l~~~la~~~g~~~---------~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~ 142 (414)
T 3ndn_A 83 VSVFEERLRLIEGAPA---------AFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSEILP 142 (414)
T ss_dssp HHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHHHHH
Confidence 3344455889998753 38999999998887776532 566788899999987776644
Q ss_pred -hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 208 -AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 208 -~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.|+ +++.||.+ |+++|++++++++ .+|++..++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus 143 ~~g~---~~~~v~~~-------d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~ 206 (414)
T 3ndn_A 143 RWGV---QTVFVDGD-------DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFA 206 (414)
T ss_dssp HTTC---EEEEECTT-------CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCc---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCc
Confidence 888 89888864 8899999986543 378889999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842 287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364 (499)
Q Consensus 287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 364 (499)
.+....+. .. ++|.++.+.+|+++.+.. +|+++.+++. +.+.+...... .
T Consensus 207 ~~~~~~~~----~~---g~div~~S~sK~l~~~G~~~~G~vv~~~~~-~~~~l~~~~~~--------------------~ 258 (414)
T 3ndn_A 207 TPLLQQGF----PL---GVDVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQKLMRH--------------------T 258 (414)
T ss_dssp HHHHCCCG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HTTHHHHHHHH--------------------H
T ss_pred ccccCCch----hc---CCCeEeccCCccccCCCCceEEEEEECHHH-HHHHHHHHHHH--------------------c
Confidence 65433221 11 379999999999986543 7887776542 21111100000 0
Q ss_pred CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------ceEEEEEecCC
Q 010842 365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------FALVCFRLNPY 427 (499)
Q Consensus 365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~v~f~~~~~ 427 (499)
+.....+..|+.++. .+.+..++++..++++++.+.|++.|++..+..|. ..+++|.+.+.
T Consensus 259 g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~ 336 (414)
T 3ndn_A 259 GPAMSAFNAWVLLKG--LETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCP 336 (414)
T ss_dssp CCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSC
T ss_pred CCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCC
Confidence 112245666766664 47788889999999999999999999886543332 35788887542
Q ss_pred CCCCcchhHHHHHHHHHHHHhc
Q 010842 428 PHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 428 ~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
. ........++.+.+...
T Consensus 337 ~----~~~~~~~~~~~~~l~~~ 354 (414)
T 3ndn_A 337 E----DVAKQRAFEVLDKMRLI 354 (414)
T ss_dssp G----GGHHHHHHHHHHHCSSS
T ss_pred c----cccHHHHHHHHHhCccc
Confidence 0 00023356677766543
No 169
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.84 E-value=7.5e-19 Score=179.35 Aligned_cols=255 Identities=15% Similarity=0.139 Sum_probs=169.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. +++++|.+.. +++++||+|+..++.+... ++..|+++...|.+..
T Consensus 56 ~~~~~~~l~~~----la~~~g~~~~---------v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~ 111 (421)
T 2ctz_A 56 MNPTVDVLEKR----LAALEGGKAA---------LATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTF 111 (421)
T ss_dssp BCHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHH
T ss_pred CChHHHHHHHH----HHHHhCCCce---------EEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 34444555555 8888887643 7777889999988876521 4667899999999887
Q ss_pred HHH----HHhCCCCCCeEEe-eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 203 KVC----KLAGVSPANIRAL-PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 203 ka~----~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
..+ +..|+ +++.+ +.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++|+
T Consensus 112 ~~~~~~~~~~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~ 175 (421)
T 2ctz_A 112 NQFKVTLKRLGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGV 175 (421)
T ss_dssp HHHHTHHHHTTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 765 67788 88888 643 889999988653 3478899999999999999999999999999
Q ss_pred EEEeeccc-cchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeC--chh----HHHhhcCCccCCCCCCC
Q 010842 278 WVHVDAAY-AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQ--PGL----LVKALSTDPEYLKNKPS 349 (499)
Q Consensus 278 ~lhvD~A~-g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~--~~~----l~~~~~~~~~yl~~~~~ 349 (499)
++|+|++| +.+.. .. .... .+|++++++||+++.|.+ .|.+++++ ... +.........|......
T Consensus 176 ~livD~~~~~~g~~-~~---~~~~---~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~ 248 (421)
T 2ctz_A 176 ALIVDNTFGMGGYL-LR---PLAW---GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLT 248 (421)
T ss_dssp EEEEECGGGGGGTS-CC---GGGG---TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHH
T ss_pred EEEEECCccccccc-CC---cccc---CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhh
Confidence 99999999 65421 11 1111 389999999999998764 66666652 111 11111111111100000
Q ss_pred CCCCcccCC-----CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----------
Q 010842 350 ESNSVVDFK-----DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP---------- 414 (499)
Q Consensus 350 ~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---------- 414 (499)
.......+. ......+.....+..|+.++.+ +.+..++++..++++++.+.|+++|+++.+..
T Consensus 249 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~ 326 (421)
T 2ctz_A 249 EAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGM--ETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHD 326 (421)
T ss_dssp HHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHH
T ss_pred hhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc--chHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHH
Confidence 000000000 0000122344556666665543 56777788888999999999999999987631
Q ss_pred --------CCceEEEEEecC
Q 010842 415 --------RHFALVCFRLNP 426 (499)
Q Consensus 415 --------~~~~~v~f~~~~ 426 (499)
...++++|.+.+
T Consensus 327 ~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 327 RAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp HHHHHHTTCCCSEEEEEETT
T ss_pred HHHHhccCCCceEEEEEeCC
Confidence 235678888864
No 170
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.84 E-value=1e-19 Score=185.29 Aligned_cols=338 Identities=14% Similarity=0.107 Sum_probs=200.5
Q ss_pred HHHHHHHHHHcccCC-----cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842 104 GFLGEMLCACFNSVG-----FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178 (499)
Q Consensus 104 ~~~~~~l~~~~n~~~-----~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~ 178 (499)
..+.+.+...+..+. ..|...++..++++++.+|+.+.+|.+... ...++|+|||+|+..++.+....-
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~~g- 122 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-----QNIALTNGSQSAFFYLFNLFAGRR- 122 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSBC--
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCCcHHHHHHHHHHHcCCC-
Confidence 455555555543221 256666677899999999998888864321 257999999999998888764210
Q ss_pred hHhhhhccCCeEEEcC-CCCchhHHHHHHHh----CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842 179 DAVGAENMHKLVVYGS-DQTHSTFAKVCKLA----GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253 (499)
Q Consensus 179 ~~~~~~g~~~~~i~~s-~~~H~s~~ka~~~~----G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t 253 (499)
.+| .+..|+++ ..+|..+...+... +.+. .+..++.+.. ++.+|+++|+ +.+ .+.+|+.+
T Consensus 123 ----d~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~d~~~l~--~~~------~~~~v~~~ 187 (417)
T 3g7q_A 123 ----ADG-STKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQF-KYHVDFEHLH--IGE------ETGMICVS 187 (417)
T ss_dssp --------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGEE-EEECCGGGCC--CCT------TEEEEEEE
T ss_pred ----ccC-CcceEEEeCCCccccchhhccchhhhccccC-cccccCCccc-ccccCHHHhc--ccc------CceEEEEC
Confidence 000 11157776 77787776665432 2311 3333443211 3678999988 332 24578889
Q ss_pred cCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842 254 VGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP 330 (499)
Q Consensus 254 ~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~ 330 (499)
.++|+||.+-| +++|+++|++||+++++|++|+.+.... .+..........+.++.+.+|++.....+|+++.+.
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~- 265 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAND- 265 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCH-
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEeCH-
Confidence 99999999977 8999999999999999999997532111 111111122346778889999755556688876643
Q ss_pred hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH----HH-HHHHHHHHHHHHHHHHhc
Q 010842 331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL----QS-HIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~----~~-~~~~~~~~a~~l~~~L~~ 405 (499)
+.. +.+....... +.....+...++...+....+ .+ +.++..++.+++.+.|++
T Consensus 266 ~~~-~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 266 KTI-TAIANMNGII--------------------SLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp HHH-HHHHHHHHHH--------------------CCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHhhcce--------------------eeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 2221100000 001122333333333321112 22 344555666677777765
Q ss_pred -CC--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-C--------EEEEEEeccCCC
Q 010842 406 -DP--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-G--------LYMLRFAVGASL 473 (499)
Q Consensus 406 -~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g--------~~~lRi~~~~~~ 473 (499)
++ ++++..+.....+++.+.... ....++.+.|.++|+.+..+..+. + ..++|++++ .
T Consensus 325 ~l~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~-~- 394 (417)
T 3g7q_A 325 YLSEERCLIHKPEGAIFLWLWFKDLP--------ITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV-P- 394 (417)
T ss_dssp HCCTTTCEEECCCBSSEEEEECTTCS--------SCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESC-S-
T ss_pred hcccCCceeeCCCcceEEEEEcCCCC--------CCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEec-C-
Confidence 45 467665544555666664311 013567777777886554433321 1 468999995 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHhcc
Q 010842 474 TDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
++++|++++++|.++.+++.++
T Consensus 395 -~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 395 -EPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999998877543
No 171
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.83 E-value=3.3e-19 Score=180.72 Aligned_cols=356 Identities=10% Similarity=0.003 Sum_probs=215.0
Q ss_pred HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCC--C
Q 010842 70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLP--K 146 (499)
Q Consensus 70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~--~ 146 (499)
-.+.+.+...-.++..+.....|+.+...++..+. +.+.+..... .....|....+..++.+++.+|+.+..|.+ +
T Consensus 16 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 94 (401)
T 7aat_A 16 LGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNC-VRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS 94 (401)
T ss_dssp HHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred HHHHHHHhhCCCCCceeeeeeeEECCCCCEechHH-HHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence 44445554433344444444444444433333333 3443444332 234456666677889999888887766642 2
Q ss_pred ccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842 147 TFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224 (499)
Q Consensus 147 ~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 224 (499)
+ ..++ |+|||+|+..++.+.+... .++..|+++.++|..+...++..|. +++.+|++.+.
T Consensus 95 ~-------~i~~v~t~G~~~al~~~~~~l~~~~--------~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~ 156 (401)
T 7aat_A 95 G-------RYVTVQGISGTGSLRVGANFLQRFF--------KFSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPK 156 (401)
T ss_dssp T-------CEEEEEEEHHHHHHHHHHHHHHHHC--------TTCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETT
T ss_pred C-------ceEEEecCcchHHHHHHHHHHHHhc--------cCCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeeccc
Confidence 2 2455 9999999998877654211 1466788899999999999999999 99999986434
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCcc--chhh-
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPE--FRHY- 298 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~--~~~~- 298 (499)
++.+|++++++.+++ . ...+.+|+.+.++||||.+ +++++|+++|++||+++++|.+|+.+...... ....
T Consensus 157 ~~~~d~~~l~~~l~~-~--~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 233 (401)
T 7aat_A 157 TCSLDFTGAMEDISK-I--PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALR 233 (401)
T ss_dssp TTEECHHHHHHHHTT-S--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred cCccCHHHHHHHHHh-C--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHH
Confidence 579999999988865 1 2235678889999999976 55889999999999999999999876542210 0000
Q ss_pred -hcCCCCCceeEecccccccCC-CcceEEEEe--Cchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842 299 -LNGIERVDSFSFSPHKWLLSY-LDCCCLWVK--QPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL 371 (499)
Q Consensus 299 -~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r--~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 371 (499)
......-..++.+++|.++.| ..+|++++. ++.. +...+.. +.... . . ...+.
T Consensus 234 ~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~---~~~~~--------------~-~--~~~~~ 293 (401)
T 7aat_A 234 HFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKI---LIRPM--------------Y-S--NPPMN 293 (401)
T ss_dssp HHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH---HHHHH--------------H-S--SCCHH
T ss_pred HHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHH---HHHhc--------------c-C--CCChH
Confidence 112223456789999999755 347887762 3321 1111110 00000 0 0 00122
Q ss_pred HHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842 372 RLWMVLRSY--G------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR 440 (499)
Q Consensus 372 ~~~~~l~~~--g------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 440 (499)
...++...+ + .+.+++..++..++++++.+.|++.. ++++. +|..+.+.|. +.. .+
T Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~--~~~----------~~ 360 (401)
T 7aat_A 294 GARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFT--GLK----------PE 360 (401)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEEC--CCC----------HH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEec--CCC----------HH
Confidence 333332222 1 34466777788889999999998862 34433 2343444442 211 12
Q ss_pred HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+...+.+.|+. +.+ .+|++++ ..++ ++|++++++|+++.
T Consensus 361 ~~~~ll~~~gi~-v~~-------~~Ris~~-~~~~-~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 361 QVERLTKEFSIY-MTK-------DGRISVA-GVAS-SNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHCEE-CCT-------TCEEEGG-GCCT-TTHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEe-ccC-------CCeEEec-cCCh-hhHHHHHHHHHHHh
Confidence 222223445743 332 2799996 4444 45999999998864
No 172
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.83 E-value=6.6e-19 Score=176.71 Aligned_cols=287 Identities=10% Similarity=0.042 Sum_probs=179.9
Q ss_pred HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCC-chhHHHHHHHhC
Q 010842 132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQT-HSTFAKVCKLAG 209 (499)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~-H~s~~ka~~~~G 209 (499)
.++.+++++++|.++ ..++|+|||+|+..++.+++..... +.++ ..|+++..+ |.+...+....|
T Consensus 73 ~~l~~~la~~~g~~~--------~v~~~~g~t~a~~~~~~~~~~~~~~-----~~~g~~~vl~~~~~y~~~~~~~~~~~~ 139 (375)
T 2eh6_A 73 EELAHKLVKHFWTEG--------KVFFANSGTESVEAAIKLARKYWRD-----KGKNKWKFISFENSFHGRTYGSLSATG 139 (375)
T ss_dssp HHHHHHHHHTSSSCE--------EEEEESSHHHHHHHHHHHHHHHHHH-----TTCCCCEEEEEBTCCCCSSHHHHHHCB
T ss_pred HHHHHHHHhhcCCCC--------eEEEeCchHHHHHHHHHHHHHHhcc-----CCCCCCEEEEECCCcCCCchhhhhhcC
Confidence 344566888899853 3599999999999998865432100 0133 567777666 444444444333
Q ss_pred C-----CCC----CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhC
Q 010842 210 V-----SPA----NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYG 276 (499)
Q Consensus 210 ~-----g~~----~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~ 276 (499)
. |.. .+..+|. +|+++|+++++++ +.+|+++.++|++|.+.| +++|+++|++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~ 206 (375)
T 2eh6_A 140 QPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD 206 (375)
T ss_dssp CGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHT
T ss_pred CccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 2 000 1223321 5899999888642 457888889999999977 999999999999
Q ss_pred CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|+|++|+++............+. ..|+++++ |+++.+.++|+++++++ +.+.+... ...
T Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~--~~~~~~~~---~~~---------- 268 (375)
T 2eh6_A 207 VLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE--VAQSFTPG---SHG---------- 268 (375)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH--HHTTCCTT---SCC----------
T ss_pred CEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH--HHhhhcCC---CCC----------
Confidence 99999999986422111111111121 37888877 88887888999998763 22222110 000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE 436 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 436 (499)
.+.....+...+++..+. .+++..++..++++++.+.|++++...+ ++..+++++.+...
T Consensus 269 -------~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~--------- 328 (375)
T 2eh6_A 269 -------STFGGNPLACRAGTVVVD--EVEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELERE--------- 328 (375)
T ss_dssp -------CSSTTCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSC---------
T ss_pred -------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCc---------
Confidence 000112344444443332 1226778888899999999988754222 23445666666432
Q ss_pred HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
..++.+.|.++|+.+ .+. +..++|+++. ..++++|+++++++|+++
T Consensus 329 --~~~~~~~l~~~gi~~-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 329 --CKDYVLKALEKGLLI-NCT---AGKVLRFLPP-LIIQKEHIDRAISVLREI 374 (375)
T ss_dssp --CHHHHHHHHHTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCEE-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence 245667777778543 322 3457999984 678999999999999875
No 173
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.83 E-value=5.8e-19 Score=188.39 Aligned_cols=239 Identities=13% Similarity=0.126 Sum_probs=164.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC 205 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~ 205 (499)
...++|+. +++++|.+..+ ++++|+|.||..++.+..+ ++..|++++.+|.|+..++
T Consensus 196 ~i~eaE~~----lA~~fGa~~a~--------~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l 252 (715)
T 3n75_A 196 PHKEAEQY----IARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLM 252 (715)
T ss_dssp HHHHHHHH----HHHHHTCSEEE--------EESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHH
T ss_pred HHHHHHHH----HHHHhCCCCce--------EECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHH
Confidence 34455555 99999998763 5566667898877776532 6788999999999999999
Q ss_pred HHhCCCCCCeEEeeCCCCCCCcc---------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842 206 KLAGVSPANIRALPTSVDANFSL---------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~---------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~ 276 (499)
.+.|+ .+++++.+.+ .|.+ |+++|+++|++..+ .+.|.+|+++.+ |++|.+.|+++|+++|+++
T Consensus 253 ~lsGa---~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~- 325 (715)
T 3n75_A 253 MMSDV---TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK- 325 (715)
T ss_dssp HHSCC---EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-
T ss_pred HHcCC---EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC-
Confidence 99999 9999987643 3443 89999999986432 123557888888 8999999999999999876
Q ss_pred CEEEeeccccchhccCccchhh--hcCCCCCcee---EecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 277 IWVHVDAAYAGSACICPEFRHY--LNGIERVDSF---SFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 277 ~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi---~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
+++||+||+++..+.+.+... +..-..+|.+ +.++||+++++.++|++++++.... ..+.....++..
T Consensus 326 -~livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~-~~~~~~~~~~~S----- 398 (715)
T 3n75_A 326 -SIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNE-ETFNEAYMMHTT----- 398 (715)
T ss_dssp -EEEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCH-HHHHHHHHHTSC-----
T ss_pred -cEEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhH-HHHHHHHHhhcC-----
Confidence 489999999876455543311 1110126776 8999999999889999999875211 111111111111
Q ss_pred CCcccCCCcccCCCCCCC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcC
Q 010842 352 NSVVDFKDWQVGTGRRFK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVP 414 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~ 414 (499)
+.+.- ...+-++++.+-.+.-+++.++..++++++++.|+++++ ++++.+
T Consensus 399 -------------TSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~ 456 (715)
T 3n75_A 399 -------------TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQP 456 (715)
T ss_dssp -------------SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSC
T ss_pred -------------CCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCc
Confidence 11111 123334455543222355788999999999999988764 566543
No 174
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.83 E-value=2.7e-19 Score=182.67 Aligned_cols=315 Identities=10% Similarity=-0.013 Sum_probs=195.8
Q ss_pred cc-ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH--HHHHHHHHHHHhHhhhhcc------CCeE
Q 010842 120 NW-LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL--VTLIAARDRALDAVGAENM------HKLV 190 (499)
Q Consensus 120 ~~-~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~--~al~~ar~~~~~~~~~~g~------~~~~ 190 (499)
.| ...++..+++++ ++++++.+.+ ..++|+|+++++. .++.+..... + |. .+..
T Consensus 64 ~Yp~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~-~-----g~~~~~~~~gd~ 126 (423)
T 3ez1_A 64 NYPGGVAGLPSARAL----FAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHGV-R-----GSTGPWLSQTPK 126 (423)
T ss_dssp SSCSCTTCCHHHHHH----HHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTCC-T-----TCSSCGGGGCCE
T ss_pred CCCCCCCChHHHHHH----HHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhccC-C-----CccccccCCCCE
Confidence 44 444556667766 6677787654 4689999999986 5655543200 0 00 0467
Q ss_pred EEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---
Q 010842 191 VYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE--- 266 (499)
Q Consensus 191 i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~--- 266 (499)
|+++.++|..+...++..|. +++.||++.+ .+|+++|++++++ ...+.+|+++ .++|+||.+-|.+
T Consensus 127 Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~ 196 (423)
T 3ez1_A 127 MIVTVPGYDRHFLLLQTLGF---ELLTVDMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKAR 196 (423)
T ss_dssp EEEEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHH
T ss_pred EEEcCCCcHHHHHHHHHcCC---EEEeccCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHH
Confidence 88899999999999999999 9999999864 4999999999852 1123455444 7899999997776
Q ss_pred HHHHHH-HHhCCEEEeeccccchhccC---ccchhhh-----cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842 267 PLAEVA-NEYGIWVHVDAAYAGSACIC---PEFRHYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL 337 (499)
Q Consensus 267 ~I~~ia-~~~~~~lhvD~A~g~~~~~~---~~~~~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~ 337 (499)
+|+++| ++||+++++|++|+...+.. +...... .+....+.+..+.+|++..+..+|+++.+++ .. +.+
T Consensus 197 ~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~-~~-~~~ 274 (423)
T 3ez1_A 197 RLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED-NI-RWL 274 (423)
T ss_dssp HHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH-HH-HHH
T ss_pred HHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH-HH-HHH
Confidence 888888 99999999999998532221 1111111 1222356788899998766678888877653 22 222
Q ss_pred cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH------HHHHHHHHHHHHH----HHHHHHHHhcCC
Q 010842 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV------LNLQSHIRSDIRL----AKMFEGFVKSDP 407 (499)
Q Consensus 338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------~g~~~~~~~~~~~----a~~l~~~L~~~~ 407 (499)
.....+. +.....+..+++...+.. +.+++..+...+. .+.+.+.|..++
T Consensus 275 ~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 334 (423)
T 3ez1_A 275 SKYLGAQ--------------------SIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGG 334 (423)
T ss_dssp HHHHHHS--------------------CSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHhhh--------------------ccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Confidence 1110000 001123334444333322 2233333333333 344445555554
Q ss_pred -CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeE-----CCEEEEEEeccCCCCcHHHHH
Q 010842 408 -RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIV-----GGLYMLRFAVGASLTDERHVV 480 (499)
Q Consensus 408 -~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----~g~~~lRi~~~~~~~t~~di~ 480 (499)
++++..+.....+.+.+.... ...+.+.+.++|+.+.. +..+ .+..++|+++. .. ++++|+
T Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~-~~-~~~~i~ 402 (423)
T 3ez1_A 335 EYATWTLPKGGYFISLDTAEPV----------ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPT-RP-PVEEVR 402 (423)
T ss_dssp SSEEECCCSBSSCEEEEESSSC----------HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCS-SS-CHHHHH
T ss_pred CceEEeCCCccEEEEEECCCCc----------HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcC-CC-CHHHHH
Confidence 477664545556666765421 35566777778854433 2112 23578999995 33 899999
Q ss_pred HHHHHHHHHHHHHhc
Q 010842 481 AAWELIMEGADRLFK 495 (499)
Q Consensus 481 ~l~~~l~~~~~~l~~ 495 (499)
+++++|.++.+++..
T Consensus 403 ~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 403 TAMQVVAACIRLATE 417 (423)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998876643
No 175
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.83 E-value=6.2e-19 Score=178.45 Aligned_cols=295 Identities=12% Similarity=0.034 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.+++++++|.+ ..++|+|||+|+..++.+++..... +..| ++.+|+.+...|.+...++...
T Consensus 82 ~~~~~l~~~la~~~g~~---------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~~ 149 (397)
T 2ord_A 82 RPQMELAELLSKNTFGG---------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTAT 149 (397)
T ss_dssp HHHHHHHHHHHHTTTSC---------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhcc
Confidence 45556667788888842 2499999999999998887642110 0001 2234445555677777777777
Q ss_pred CCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc----cCChhHHHHHHHHh
Q 010842 209 GVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA----VDNVEPLAEVANEY 275 (499)
Q Consensus 209 G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~----id~l~~I~~ia~~~ 275 (499)
|.. ...++.+|. .|+++|+++++++ +.+|+++.++|++|. .+++++|+++|++|
T Consensus 150 g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~ 216 (397)
T 2ord_A 150 GQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEY 216 (397)
T ss_dssp BCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHc
Confidence 761 001666664 2899999988642 458888889999999 38899999999999
Q ss_pred CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842 276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 355 (499)
|+++++|++|+++............+. ..|.+++ +|+++.+..+|+++++++. . .+.. . ...
T Consensus 217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~~--~--~~~-------- 278 (397)
T 2ord_A 217 DALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLEP--G--DHG-------- 278 (397)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCCT--T--SSC--------
T ss_pred CCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--ccCC--C--CcC--------
Confidence 999999999976432111111111122 2687765 7999976779999887641 1 1110 0 000
Q ss_pred cCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCC
Q 010842 356 DFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYP 428 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~ 428 (499)
.+.....+..++ +++.+.. +++.++..++++++.+.|++. +.+... ++..+++++.+....
T Consensus 279 --------~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 346 (397)
T 2ord_A 279 --------TTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV 346 (397)
T ss_dssp --------CSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS
T ss_pred --------CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH
Confidence 000112333333 3433322 356677778888888888654 332222 234466777765321
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...++.+.|.++|..+... +..++|+++. ..++++|+++++++|+++.++
T Consensus 347 ---------~~~~l~~~l~~~gi~v~~~----~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 347 ---------SNREVATKCFENKLLVVPA----GNNTIRFLPP-LTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp ---------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred ---------HHHHHHHHHHHCCCEEccC----CCCEEEEECC-cCCCHHHHHHHHHHHHHHHhh
Confidence 1356777777778543322 3457999973 678999999999999988654
No 176
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=1.2e-19 Score=183.47 Aligned_cols=285 Identities=13% Similarity=0.110 Sum_probs=188.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.+...++++ .+++++|.+.. +++++||+|+..++. ... ++..|+++...|.+...
T Consensus 54 ~~~~~~lr~----~la~~~g~~~~---------i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~ 108 (393)
T 1n8p_A 54 NPNRENLER----AVAALENAQYG---------LAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHR 108 (393)
T ss_dssp CHHHHHHHH----HHHHHTTCSEE---------EEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHH
T ss_pred ChhHHHHHH----HHHHHhCCCcE---------EEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHH
Confidence 344444554 48889988643 777778999988877 321 45678888888886555
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh----
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---- 275 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---- 275 (499)
. ++..|+ +++.+|++ | ++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++
T Consensus 109 ~~~~~~~~~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~ 171 (393)
T 1n8p_A 109 YFTKVANAHGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQ 171 (393)
T ss_dssp HHHHTSTTTCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHcCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCC
Confidence 3 445677 88888864 6 7888877543 45788899999999999999999999999
Q ss_pred CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cc-eEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DC-CCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
|+++|+|++|+.+.... ... + .+|.++.++||+++.+. .. |+++.+++..+....... ..
T Consensus 172 ~~~livD~a~~~~~~~~--~~~----~-~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-~~---------- 233 (393)
T 1n8p_A 172 DVILVVDNTFLSPYISN--PLN----F-GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-NA---------- 233 (393)
T ss_dssp TCEEEEECTTTHHHHCC--GGG----G-TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-HH----------
T ss_pred CCEEEEeCCccccccCC--HHH----c-CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-Hh----------
Confidence 99999999998775421 111 1 38999999999998553 14 777776544332211110 00
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE-cC-----C-----------
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIV-VP-----R----------- 415 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~-~~-----~----------- 415 (499)
.+........|+.++.+ +.+...+++..++++.+.+.|++.|. +.-+ .+ +
T Consensus 234 ----------~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~ 301 (393)
T 1n8p_A 234 ----------IGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRD 301 (393)
T ss_dssp ----------HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGG
T ss_pred ----------cCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCC
Confidence 01112345555555444 45667778888889999999988876 5432 22 1
Q ss_pred -C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---------EEee-eE-----------CC--EEEEEEecc
Q 010842 416 -H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---------LTHT-IV-----------GG--LYMLRFAVG 470 (499)
Q Consensus 416 -~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---------~~~~-~~-----------~g--~~~lRi~~~ 470 (499)
. .++++|.+.+. ......+++.+...++.+ ..+. .. .| ...+|+|++
T Consensus 302 ~~~~~i~~~~l~~~--------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g 373 (393)
T 1n8p_A 302 ALGGGMISFRIKGG--------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVG 373 (393)
T ss_dssp GCCCSEEEEEESSC--------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECC
T ss_pred CCCccEEEEEeCCc--------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEc
Confidence 2 56788888542 223455666553222111 1000 00 12 368999996
Q ss_pred CCCCcHHHHHHHHHHHHHH
Q 010842 471 ASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 471 ~~~~t~~di~~l~~~l~~~ 489 (499)
..+++++|+.+.++|+++
T Consensus 374 -~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 374 -IEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp -SSCHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHh
Confidence 889999999999999875
No 177
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.83 E-value=2.6e-19 Score=182.11 Aligned_cols=325 Identities=13% Similarity=0.043 Sum_probs=204.0
Q ss_pred HHHHHHHHHHc-c-cCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEE--cCChHHHHHHHHHHHHHHH
Q 010842 104 GFLGEMLCACF-N-SVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRA 177 (499)
Q Consensus 104 ~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~ 177 (499)
..+.+.+...+ + .....|...++..++++++.+|+....|. +.+ ..++ |+|||+|+..++..++..
T Consensus 51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~t~gg~~a~~~~~~~~~~~- 122 (412)
T 1ajs_A 51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-------RVGGVQSLGGTGALRIGAEFLARW- 122 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEEEHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-------cEEEEECCCcHHHHHHHHHHHHHh-
Confidence 44555555555 2 12334655566788888877776544443 222 3588 999999998886543321
Q ss_pred HhHhhhhccCC-----eEEEcCCCCchhHHHHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842 178 LDAVGAENMHK-----LVVYGSDQTHSTFAKVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC 251 (499)
Q Consensus 178 ~~~~~~~g~~~-----~~i~~s~~~H~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv 251 (499)
. ++ ..|+++..+|.++...++..|. + ++.+|.+.++++.+|+++|++++++. +....+|+
T Consensus 123 -~-------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~ 188 (412)
T 1ajs_A 123 -Y-------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL 188 (412)
T ss_dssp -S-------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred -C-------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence 0 34 5688888999999999999999 9 99999853235789999999998752 11235677
Q ss_pred EecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC--ccchhh--hcCCCCCceeEecccccccCC-Ccce
Q 010842 252 ATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC--PEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCC 323 (499)
Q Consensus 252 ~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g 323 (499)
.+.++|+||.+ +++++|+++|++||+++++|++|.++.... ...... +.....-+.++.+.+|.++.+ ..+|
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 268 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVG 268 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceE
Confidence 89999999999 456789999999999999999998764321 011111 111111237788999988763 3478
Q ss_pred EEEEe--Cchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHH
Q 010842 324 CLWVK--QPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIR 390 (499)
Q Consensus 324 ~l~~r--~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~ 390 (499)
++++. +++. +...+.....+.. .+ ...+..+++...+. .+.+++..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 328 (412)
T 1ajs_A 269 NLTVVAKEPDSILRVLSQMQKIVRVTW-----------------SN---PPAQGARIVARTLSDPELFHEWTGNVKTMAD 328 (412)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHTTT-----------------SS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHHHHHhccc-----------------CC---CChHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence 88882 4432 1111110000000 00 01233333333332 236677888
Q ss_pred HHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEE
Q 010842 391 SDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRF 467 (499)
Q Consensus 391 ~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi 467 (499)
+..++++++.+.|++.+ ++++.. +..+.+.|. ... ...+...+.+.|+ ++.+ .+|+
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~~l~~~gv-~v~~-------~~Ri 387 (412)
T 1ajs_A 329 RILSMRSELRARLEALKTPGTWNHIT-DQIGMFSFT--GLN----------PKQVEYLINQKHI-YLLP-------SGRI 387 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHH-HCCSSEEEC--CCC----------HHHHHHHHHTTCE-ECCT-------TSEE
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeEEc-CCCceEEEe--CCC----------HHHHHHHHHhCCE-EecC-------CcEE
Confidence 88899999999999874 365543 333333332 111 2233344456674 3333 2699
Q ss_pred eccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 468 AVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 468 ~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+++ . .+++++++++++|+++.+++
T Consensus 388 s~~-~-~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 388 NMC-G-LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp EGG-G-CCTTTHHHHHHHHHHHHHHC
T ss_pred Eee-e-CCHHHHHHHHHHHHHHHHhc
Confidence 986 2 48899999999999987653
No 178
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.83 E-value=6.9e-18 Score=172.29 Aligned_cols=313 Identities=12% Similarity=0.072 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHc-CCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 131 EIVVMDWLATML-KLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 131 E~~~~~~la~l~-g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
..++.+.+++++ | +. + ..++|+||++|+..++..++... . ++.+|+.+...|.+...++...
T Consensus 86 ~~~l~~~la~~~~~-~~~~-------~v~~~~g~~~a~~~~~~~a~~~~-~-------~~~vi~~~p~y~~~~~~~~~~~ 149 (426)
T 1sff_A 86 YLELCEIMNQKVPG-DFAK-------KTLLVTTGSEAVENAVKIARAAT-K-------RSGTIAFSGAYHGRTHYTLALT 149 (426)
T ss_dssp HHHHHHHHHHHSSC-SSCE-------EEEEESSHHHHHHHHHHHHHHHH-T-------CCEEEEETTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHhCCc-cccc-------EEEEeCchHHHHHHHHHHHHHhh-C-------CCeEEEECCCcCCCchHhhhhc
Confidence 344455578877 5 22 2 36999999999999988654321 1 3434444455566676777776
Q ss_pred CCC--------C--CCeEEeeCCC---CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHH
Q 010842 209 GVS--------P--ANIRALPTSV---DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEV 271 (499)
Q Consensus 209 G~g--------~--~~v~~v~~~~---~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~i 271 (499)
|.. . ..++.+|++. +..+.+|+++|++++++.. .+..+.+|+++...+++|.+.+ +++|.++
T Consensus 150 g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l 228 (426)
T 1sff_A 150 GKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRAL 228 (426)
T ss_dssp SCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHH
T ss_pred CCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence 651 0 1277788753 1134689999999987410 0112445655443334997777 9999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 351 (499)
|++||+++++|++|+++....+.......++ ..|.++ .+|+++....+|+++.+++ +.+.+... ..
T Consensus 229 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~s--~sK~~~~GlriG~~~~~~~--~~~~l~~~----~~----- 294 (426)
T 1sff_A 229 CDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTT--FAKSIAGGFPLAGVTGRAE--VMDAVAPG----GL----- 294 (426)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEE--ECGGGGTSSCCEEEEEEHH--HHTTSCTT----SB-----
T ss_pred HHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEEE--EcccccCCCceEEEEEcHH--HHhhhccC----Cc-----
Confidence 9999999999999986432111111011122 267664 4699985455799988753 22222110 00
Q ss_pred CCcccCCCcccCCCCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842 352 NSVVDFKDWQVGTGRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL 424 (499)
Q Consensus 352 ~~~~~~~~~~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~ 424 (499)
..+.....+. +..+++.+..+ ++.++..++++++.+.|++ .+.+..+ ++..+++++.+
T Consensus 295 -----------~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~ 359 (426)
T 1sff_A 295 -----------GGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIEL 359 (426)
T ss_dssp -----------CCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEE
T ss_pred -----------CcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEE
Confidence 0011112333 33344444322 3556667777777777765 4444333 23456777777
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+...... .......++.++|.++|+.+..+.. ...++|+++. ..++++++++++++|+++.+++
T Consensus 360 ~~~~~~~~-~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 360 FEDGDHNK-PDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp BGGGCTTS-BCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccC-CChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 42100000 0022356788888888854433322 2467999984 6789999999999999988765
No 179
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=1.6e-19 Score=183.77 Aligned_cols=357 Identities=9% Similarity=-0.022 Sum_probs=215.5
Q ss_pred HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH-HcccC-CcccccChhhHHHHHHHHHHHHHHcCC--
Q 010842 69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA-CFNSV-GFNWLASPASTELEIVVMDWLATMLKL-- 144 (499)
Q Consensus 69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~-- 144 (499)
...+.+.+.+.-.+......+..++++..... ++..+.+.+.. .+... ...|...++..++++++.+|+.+..|.
T Consensus 16 ~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~ 94 (412)
T 1yaa_A 16 LFGIKQRYGQDQRATKVDLGIGAYRDDNGKPW-VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL 94 (412)
T ss_dssp THHHHHHHHTCCCSSCEECSSCCCBCTTSCBC-CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCC-CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence 34555555443123334444444444432223 33445555555 55422 234555566788999988887665553
Q ss_pred CCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeC-C
Q 010842 145 PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT-S 221 (499)
Q Consensus 145 ~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~-~ 221 (499)
+.+ ..++ |+|||+|+..++...+.. . ++..|+++.++|.++...++..|. +++.+|. +
T Consensus 95 ~~~-------~i~~~~t~g~~~a~~~~~~~~~~~--~-------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~ 155 (412)
T 1yaa_A 95 QED-------RVISVQSLSGTGALHISAKFFSKF--F-------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWA 155 (412)
T ss_dssp HTT-------CEEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEE
T ss_pred Ccc-------eEEEEeccchHhHHHHHHHHHHHh--C-------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeec
Confidence 122 3578 999999988775433221 0 455688888999999999999999 9999998 5
Q ss_pred CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEEEeeccccchhccC--ccch
Q 010842 222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAYAGSACIC--PEFR 296 (499)
Q Consensus 222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~~~~ 296 (499)
++ ++.+|+++|++++++. .....+++.+.++|+||.+- ++++|+++|++||+++++|++|+++.... ....
T Consensus 156 ~~-~~~~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 231 (412)
T 1yaa_A 156 NE-TKSLDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAY 231 (412)
T ss_dssp TT-TTEECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTH
T ss_pred CC-CCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhH
Confidence 33 4689999999999753 11124556699999999995 46788999999999999999997654321 0111
Q ss_pred hh--hcCCCC---CceeEecccccccCC-CcceEEE--E----eCchh---HHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 297 HY--LNGIER---VDSFSFSPHKWLLSY-LDCCCLW--V----KQPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 297 ~~--~~g~~~---aDsi~~~~hK~l~~p-~~~g~l~--~----r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
.. +..... -+.++.+.+|.++.+ ..+|+++ . +++.. +.+.+.....+..
T Consensus 232 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------------- 295 (412)
T 1yaa_A 232 AVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEV---------------- 295 (412)
T ss_dssp HHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTT----------------
T ss_pred HHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhcc----------------
Confidence 11 111111 246677889998742 3368887 4 24331 2222211000000
Q ss_pred cCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCC
Q 010842 362 VGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHS 430 (499)
Q Consensus 362 ~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~ 430 (499)
+ ....+...++...+. .+.++++.++..++++++.+.|++.+ ++++.. +..+.+.|. ...
T Consensus 296 ---~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~-- 366 (412)
T 1yaa_A 296 ---S-NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIV-NQCGMFSFT--GLT-- 366 (412)
T ss_dssp ---S-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH-HCCSSEEEC--CCC--
T ss_pred ---C-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec-cCceEEEee--CCC--
Confidence 0 001233333333331 24677888888889999999998864 365543 333444432 211
Q ss_pred CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...+...+.+.|+. +.+ ++|++++ . .+++++++++++|+++.+.
T Consensus 367 --------~~~~~~~l~~~gi~-v~~-------~~Ris~~-~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 367 --------PQMVKRLEETHAVY-LVA-------SGRASIA-G-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp --------HHHHHHHHHHHCEE-CCT-------TSEEEGG-G-CCTTTHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhCCEE-ecc-------CcEEEEc-c-CCHhHHHHHHHHHHHHHHh
Confidence 12343334456743 333 4899996 2 5899999999999988764
No 180
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.82 E-value=3.1e-19 Score=181.07 Aligned_cols=283 Identities=16% Similarity=0.142 Sum_probs=185.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
.|...++|+. +++++|.+.. +++++|++|+..++. ... ++..|+++...|.+...
T Consensus 66 ~p~~~~l~~~----la~~~g~~~~---------i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~~ 120 (403)
T 3cog_A 66 NPTRNCLEKA----VAALDGAKYC---------LAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTNR 120 (403)
T ss_dssp CHHHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHH
T ss_pred CchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHHH
Confidence 4666677776 7777887643 677778888877765 321 45678889999987555
Q ss_pred H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-CE
Q 010842 204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-IW 278 (499)
Q Consensus 204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-~~ 278 (499)
. ++..|+ +++.+|.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++| ++
T Consensus 121 ~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~ 184 (403)
T 3cog_A 121 YFRQVASEFGL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDII 184 (403)
T ss_dssp HHHHTGGGGTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCE
T ss_pred HHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCE
Confidence 4 356788 88888864 789999888653 347888999999999999999999999999 99
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 356 (499)
+++|++|+.+....+ . . -.+|.++.+.||+++.|.+ +|+++.+++.... .+.......
T Consensus 185 livD~~~~~~~~~~~----~--~-~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~-~l~~~~~~~------------ 244 (403)
T 3cog_A 185 LVVDNTFMSPYFQRP----L--A-LGADISMYSATKYMNGHSDVVMGLVSVNCESLHN-RLRFLQNSL------------ 244 (403)
T ss_dssp EEEECTTTCTTTCCT----T--T-TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHH-HHHHHHHHH------------
T ss_pred EEEECCCcccccCCc----c--c-cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHH-HHHHHHHhc------------
Confidence 999999987653221 1 1 1489999999999998876 5888887654322 211100000
Q ss_pred CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--------------EcC---CCceE
Q 010842 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI--------------VVP---RHFAL 419 (499)
Q Consensus 357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--------------~~~---~~~~~ 419 (499)
+-....+..|+.++.+ +.+..++++..+++..+.+.+++.|.++- ..+ ...++
T Consensus 245 --------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~ 314 (403)
T 3cog_A 245 --------GAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGM 314 (403)
T ss_dssp --------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSE
T ss_pred --------CCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceE
Confidence 0011245666666554 44566677777777777777776654332 111 12567
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE------------ee-----eE-------CC--EEEEEEeccCCC
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT------------HT-----IV-------GG--LYMLRFAVGASL 473 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~------------~~-----~~-------~g--~~~lRi~~~~~~ 473 (499)
++|.+.+. .. ...+.+.+.|.+... +. .. .| ..++|++++ ..
T Consensus 315 ~~~~l~~~--------~~---~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e 382 (403)
T 3cog_A 315 VTFYIKGT--------LQ---HAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVG-LE 382 (403)
T ss_dssp EEEEESSC--------HH---HHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECC-SS
T ss_pred EEEEecCC--------HH---HHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeC-CC
Confidence 88876532 11 222333334542211 10 00 02 468999996 66
Q ss_pred CcHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEG 489 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~ 489 (499)
+++++|+.+.++|+++
T Consensus 383 ~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 383 DEEDLLEDLDQALKAA 398 (403)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7777788777777654
No 181
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.82 E-value=3.5e-19 Score=182.19 Aligned_cols=318 Identities=12% Similarity=-0.012 Sum_probs=195.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH--HHHHHHHHHHHhH--hhhhccCCeEEEcCC
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL--VTLIAARDRALDA--VGAENMHKLVVYGSD 195 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~--~al~~ar~~~~~~--~~~~g~~~~~i~~s~ 195 (499)
.|....+..+++++ ++++++.+.+ ..++|+|+++++. .++.+..+.. +. ......++..|+++.
T Consensus 73 ~Y~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~-~g~~~~~~~~~gd~V~v~~ 140 (427)
T 3ppl_A 73 NYGGLDGIVDIRQI----WADLLGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN-NDSVQPWSKEETVKWICPV 140 (427)
T ss_dssp SSCCSSCCHHHHHH----HHHHHTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC-TTCSSCGGGSSCCEEEEEE
T ss_pred CCCCCCCcHHHHHH----HHHHhCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC-CcccccccCCCCCEEEEcC
Confidence 34444455667776 5555577654 4689999999884 5555443200 00 000000156788999
Q ss_pred CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---HHHHH
Q 010842 196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE---PLAEV 271 (499)
Q Consensus 196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~---~I~~i 271 (499)
++|.++...++..|. +++.||++++ .+|+++|+++++. ..+.+|+++ .++|+||.+-|.+ +|+++
T Consensus 141 p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~ 209 (427)
T 3ppl_A 141 PGYDRHFSITERFGF---EMISVPMNED---GPDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAM 209 (427)
T ss_dssp SCCHHHHHHHHHTTC---EEEEEEEETT---EECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHC
T ss_pred CCcHHHHHHHHHcCC---EEEEeCCCCC---CCCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 999999999999999 9999999864 3999999998832 123355545 7899999998777 88888
Q ss_pred H-HHhCCEEEeeccccchhccCcc-----chhhh--cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 272 A-NEYGIWVHVDAAYAGSACICPE-----FRHYL--NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 272 a-~~~~~~lhvD~A~g~~~~~~~~-----~~~~~--~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
| ++||+++|+|++|+.+.+.... ...+. .+....+.+..+.+|++..+..+|+++.+.. .. ..+.....+
T Consensus 210 a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~-l~-~~~~~~~~~ 287 (427)
T 3ppl_A 210 ETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAE-NR-KWYTGHAGI 287 (427)
T ss_dssp CCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHH-HH-HHHHHHHHH
T ss_pred HhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHH-HH-HHHHHHhhc
Confidence 8 9999999999999875332111 11110 1223356788899999666677888776532 22 222111000
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcC
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVP 414 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~ 414 (499)
. +.....+..+++...+.. +.+++..+...+..+.+.+.| ...+++++..+
T Consensus 288 ~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p 347 (427)
T 3ppl_A 288 R--------------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP 347 (427)
T ss_dssp H--------------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC
T ss_pred c--------------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC
Confidence 0 011123444444444432 223344444444444555544 44445766555
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E-----CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V-----GGLYMLRFAVGASLTDERHVVAAWELIME 488 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lRi~~~~~~~t~~di~~l~~~l~~ 488 (499)
.....+++.+.... ..++.+.+.++|+.+..++. + .+..++|++++ . .++++|++++++|.+
T Consensus 348 ~~g~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~-~-~~~~~i~~~~~~l~~ 415 (427)
T 3ppl_A 348 AGGYFISLDVVPGT----------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPS-L-PPVEELEVAMDGVAT 415 (427)
T ss_dssp SBSSCEEEECSTTC----------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHHHHHHH
T ss_pred CccEEEEEECCcch----------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECC-C-CCHHHHHHHHHHHHH
Confidence 45555666664421 35567777778854433121 1 24578999995 3 389999999999999
Q ss_pred HHHHHh
Q 010842 489 GADRLF 494 (499)
Q Consensus 489 ~~~~l~ 494 (499)
+.+++.
T Consensus 416 ~l~~~~ 421 (427)
T 3ppl_A 416 CVLLAA 421 (427)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 182
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.82 E-value=2e-18 Score=175.06 Aligned_cols=304 Identities=14% Similarity=0.072 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-C-CeEEEcCCCCchhHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-H-KLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~-~~~i~~s~~~H~s~~ka~~ 206 (499)
....++.+++++++|.+. .++|+|||+|+..++.+++...... |. + +.+|+.+...|.+...+..
T Consensus 81 ~~~~~l~~~la~~~~~~~---------v~~~~gg~~a~~~al~~~~~~~~~~----~~~g~~~vi~~~~~y~~~~~~~~~ 147 (406)
T 4adb_A 81 EPVLRLAKKLIDATFADR---------VFFCNSGAEANEAALKLARKFAHDR----YGSHKSGIVAFKNAFHGRTLFTVS 147 (406)
T ss_dssp HHHHHHHHHHHHHSSCSE---------EEEESSHHHHHHHHHHHHHHHHHHH----TCTTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHHhhCCCCe---------EEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCCcHHHhh
Confidence 345566777999998653 4999999999999998876532111 11 2 3344444445555555555
Q ss_pred HhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-----CChhHHHHHH
Q 010842 207 LAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-----DNVEPLAEVA 272 (499)
Q Consensus 207 ~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-----d~l~~I~~ia 272 (499)
..|... .++..+|. .|+++|+++++++ +.+|+++ +++++|.+ +++++|+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~ 213 (406)
T 4adb_A 148 AGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELC 213 (406)
T ss_dssp HSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHH
T ss_pred ccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHH
Confidence 544210 13333332 4899999988633 3467777 88888854 5799999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
++||+++|+|++|+++............++ ..|.+++ +|+++....+|+++.+++ +.+.+... ...
T Consensus 214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~--~~~~~~~~---~~~------ 279 (406)
T 4adb_A 214 NRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE--CARVMTVG---THG------ 279 (406)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH--HHHTCCTT---SSC------
T ss_pred HHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH--HHhhhccC---CcC------
Confidence 999999999999986432221111112232 2677766 999985556888877543 22222111 000
Q ss_pred CcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCC
Q 010842 353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYP 428 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~ 428 (499)
.+.....+...+++..+..-..++..++..++++++.+.|++. +.+.-. +....++.+.+....
T Consensus 280 -----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 347 (406)
T 4adb_A 280 -----------TTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADY 347 (406)
T ss_dssp -----------CSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTT
T ss_pred -----------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCc
Confidence 0011123444444433321111566777788888888888764 222111 123345666665421
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS 497 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~ 497 (499)
.....++.+.|.++|..+.. .+..++|+++ +..+|++|+++++++|+++.+++.++.
T Consensus 348 -------~~~~~~~~~~l~~~gi~v~~----~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~l~~~~~~~ 404 (406)
T 4adb_A 348 -------AGQAKQISQEAAKAGVMVLI----AGGNVVRFAP-ALNVSEEEVTTGLDRFAAACEHFVSRG 404 (406)
T ss_dssp -------TTCHHHHHHHHHHTTEECEE----SSTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred -------HHHHHHHHHHHHHCCcEEee----cCCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 01145677888888854433 2356799987 477899999999999999998876543
No 183
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.82 E-value=4.1e-18 Score=175.32 Aligned_cols=356 Identities=11% Similarity=0.034 Sum_probs=215.5
Q ss_pred CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHc---ccCCcccccChhhHHHHHHHHHHHHHHcCC
Q 010842 68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACF---NSVGFNWLASPASTELEIVVMDWLATMLKL 144 (499)
Q Consensus 68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~lE~~~~~~la~l~g~ 144 (499)
..-.+.+.+...-.+..++.....|+.+-..++..++ +.+.+.... ......|...++..++.+++.+|+ +|.
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~ 110 (448)
T 3meb_A 35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGK 110 (448)
T ss_dssp TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCT
T ss_pred hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCC
Confidence 4456666666554444455555556555444443444 334333333 123345666667778888866665 366
Q ss_pred C-----CccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH----HhCCCCC
Q 010842 145 P-----KTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK----LAGVSPA 213 (499)
Q Consensus 145 ~-----~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~----~~G~g~~ 213 (499)
+ ++ ..++ |+|||+|+..++...... .++..|+++.++|.++...++ ..|+
T Consensus 111 ~~~~~~~~-------~i~~~~t~ggt~al~l~~~~~~~~---------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~--- 171 (448)
T 3meb_A 111 DSKAAQEG-------RIASCQSLSGTGSLHIGFEFLHLW---------MPKAEFYMPSTTWPNHYGIYDKVFNKLKV--- 171 (448)
T ss_dssp TCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH---------CTTCCEEEESSCCTHHHHHHHHHHCTTTS---
T ss_pred CccccCcC-------cEEEEECCcHHHHHHHHHHHHHHh---------CCCCEEEECCCCCHhHHHHHHhhHHhCCC---
Confidence 5 22 3577 999999987654322111 045678899999999999999 8999
Q ss_pred CeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchh
Q 010842 214 NIRALPT-SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 214 ~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
+++.+|+ ++++++.+|+++|++++++. .....+++.+.++|+||.+-+ +++|+++|++||+++++|++|+++.
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~ 248 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFA 248 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTS
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 9999998 54324799999999999752 122457788899999999966 5569999999999999999998765
Q ss_pred ccCc-----cchhhhcCCCCCceeEecccccccCC-CcceEE--EE--------eCch---hHHHhhcCCccCCCCCCCC
Q 010842 290 CICP-----EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCL--WV--------KQPG---LLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 290 ~~~~-----~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l--~~--------r~~~---~l~~~~~~~~~yl~~~~~~ 350 (499)
.... ...... ....-..++.+++|.++.| ..+|++ +. .++. .+...+.....+...
T Consensus 249 ~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---- 323 (448)
T 3meb_A 249 TGSFEADAFAVRMFV-DAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS---- 323 (448)
T ss_dssp SSCHHHHTHHHHHHH-HTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS----
T ss_pred CCCcccCchhHHHHh-hcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC----
Confidence 3221 011111 1112335688899999754 447877 45 3431 121111110000000
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcC--CC------eEEEcC
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKMFEGFVKSD--PR------FEIVVP 414 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~--~~------~~~~~~ 414 (499)
....+..+++...+.. +.++++.++..++++++.+.|+++ |+ ++.. .
T Consensus 324 ----------------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~-~ 386 (448)
T 3meb_A 324 ----------------MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI-L 386 (448)
T ss_dssp ----------------SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-H
T ss_pred ----------------CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-C
Confidence 0113344444444322 346777788889999999999886 44 4333 2
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
|..+.+.|. +.. .++..++ .+.|+ ++.++. .|++++ . .++++|++++++|.++.+++
T Consensus 387 ~~~g~~~~~--~~~-----------~~~~~~ll~~~gV-~v~~G~------gRis~a-~-~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 387 TAIGMFTFT--GLT-----------PEHVDYLKEKWSI-YLVKAG------GRMSMC-G-LTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp HCCSSEEEC--CCC-----------HHHHHHHHHHHCE-EECSGG------GEEEGG-G-CCTTTHHHHHHHHHHHHHHS
T ss_pred CCceEEEec--CCC-----------HHHHHHHHHhCCE-EEeCCC------cEEEEe-c-CCHHHHHHHHHHHHHHHHhc
Confidence 333334432 211 2334444 34464 444422 299985 2 35567999999999988754
No 184
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.82 E-value=3.2e-18 Score=173.14 Aligned_cols=300 Identities=13% Similarity=0.037 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCK 206 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~ 206 (499)
.....++.+++++++|. + ..++++|||+|+..++.+++...... |.++..|++...+ |.+...+..
T Consensus 77 ~~~~~~l~~~la~~~~~-~--------~v~~~~gg~ea~~~al~~~~~~~~~~----g~~~~~vi~~~~~yhg~~~~~~~ 143 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL-E--------RVFFTNSGTESIEGAMKTARKYAFNK----GVKGGQFIAFKHSFHGRTLGALS 143 (395)
T ss_dssp CHHHHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCEEEEETTCCCCSSHHHHT
T ss_pred CHHHHHHHHHHHHhcCC-C--------eEEEeCCHHHHHHHHHHHHHHHhhcc----CCCCCEEEEEcCCcCCCCHHHHh
Confidence 45666677789999883 2 25999999999999998887542211 1233445554444 444433332
Q ss_pred HhCC---------CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHH
Q 010842 207 LAGV---------SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVAN 273 (499)
Q Consensus 207 ~~G~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~ 273 (499)
..+- -..++..+|.+ |+++|+++++++ +.+|++...++++|.+.| +++|+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~ 210 (395)
T 3nx3_A 144 LTANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCD 210 (395)
T ss_dssp TCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHH
T ss_pred hcCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence 2220 00145555532 799999988633 346777777788899877 999999999
Q ss_pred HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
+||+++|+|++|.++......+.....++ ..|.++++ |.++.+..+|+++.+++. +.+.+... ...
T Consensus 211 ~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~~-~~~~~~~~---~~~------- 276 (395)
T 3nx3_A 211 EKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQKV-ASNSLEAG---DHG------- 276 (395)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHHH-HHHHSCTT---CCS-------
T ss_pred HcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchhh-hhhhcCCc---ccC-------
Confidence 99999999999986532211111111222 26777765 888777788988876542 12333211 000
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEEecCCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~ 429 (499)
.+.....+...+++..+..-.-++..++..++.+++++.|+ +.|.+..+ ++..+++.+.+....
T Consensus 277 ----------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~- 344 (395)
T 3nx3_A 277 ----------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV- 344 (395)
T ss_dssp ----------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc-
Confidence 01111344444444443211112344555555555555554 45655443 334456667665421
Q ss_pred CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
...++.+.|.++|..+... +..++|+++ +..+|++|+++++++|+++.++
T Consensus 345 --------~~~~~~~~l~~~Gi~v~~~----~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 345 --------KVAKVIQKCQENALLLISC----GENDLRFLP-PLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp --------CHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred --------hHHHHHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 1456777888888544332 346799998 4778999999999999988653
No 185
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.82 E-value=5.3e-19 Score=179.26 Aligned_cols=305 Identities=15% Similarity=0.055 Sum_probs=187.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842 120 NWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH 198 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H 198 (499)
.|...++..++++++.+++. .| .+.+ ..++|+|+++++..++... . ++..|+++.++|
T Consensus 70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~~~~-~-----------~gd~Vl~~~p~y 128 (400)
T 3asa_A 70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLLSFF-G-----------PNQTVAIQDPSY 128 (400)
T ss_dssp CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHHHHH-C-----------SSCEEEEEESCC
T ss_pred CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHHHHc-C-----------CCCEEEECCCCc
Confidence 45444566777777444432 56 4433 4689999999876643221 1 456788888999
Q ss_pred hhHHHHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842 199 STFAKVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE 274 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~ 274 (499)
.++..+++..|. . ++.+|.++++.+..|++++ ..+.+|+++.++|+||.+-| +++|+++|++
T Consensus 129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~~~-----------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFPED-----------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194 (400)
T ss_dssp HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCCTT-----------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---cceEecccchhcCcccChhhc-----------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999 8 9999987554455553221 12446777789999999976 6678999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCC---CCceeEecccccccCC-CcceEEEEeCchh------HHHhhcCCccCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIE---RVDSFSFSPHKWLLSY-LDCCCLWVKQPGL------LVKALSTDPEYL 344 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~---~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~------l~~~~~~~~~yl 344 (499)
+|+++++|++|+.+... +.....+..+. ..+.+..+.+|+++.| ..+|+++++++.. +...........
T Consensus 195 ~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (400)
T 3asa_A 195 HEILILFDAAYSTFISD-PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT 273 (400)
T ss_dssp TTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHH
T ss_pred cCCEEEEEchhhhhhcC-CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccC
Confidence 99999999999865321 11111111221 2347788999999744 4579988765431 111110000000
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE-
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR- 423 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~- 423 (499)
.+ ....+...++...+....+++..++..++++++.+.|++. ++++..+...+.++++
T Consensus 274 -------------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 332 (400)
T 3asa_A 274 -------------------FN-GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKP 332 (400)
T ss_dssp -------------------CC-CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEEC
T ss_pred -------------------cc-CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEec
Confidence 00 0122333333333322246677788888999999999987 7887755445666676
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.... + ..++.++|.++ |+.+..+..+. +..++|+++. ++++++++++++|+++.++.
T Consensus 333 ~~~~~--~-------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 333 TQANI--S-------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL---GKREDILAACERLQMAPALQ 393 (400)
T ss_dssp CCTTC--C-------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC---SCHHHHHHHHHHHHC-----
T ss_pred cCCCC--C-------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee---CCHHHHHHHHHHHHHHHHhh
Confidence 43210 0 12355556544 75444333332 3467999953 68999999999998887654
No 186
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.82 E-value=4.1e-19 Score=179.48 Aligned_cols=319 Identities=13% Similarity=0.046 Sum_probs=197.4
Q ss_pred HHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhH
Q 010842 104 GFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDA 180 (499)
Q Consensus 104 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~ 180 (499)
..+.+.+...+.. ....|....+..++++++.+|+... +.+.+ ..++ |+|||+|+..++.+.+...
T Consensus 47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~--- 115 (394)
T 2ay1_A 47 RAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN--- 115 (394)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC---
Confidence 3445555544322 2334555566788888877766322 22333 3467 9999999998887765321
Q ss_pred hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
++..|+++..+|.++...++..|. +++.+|.+..+++.+|+++|++++++. .....+++.+.++|+||
T Consensus 116 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG 183 (394)
T 2ay1_A 116 ------PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTG 183 (394)
T ss_dssp ------TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTC
T ss_pred ------CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence 345688888999999999999999 999999863234789999999998642 11235677799999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccchhccC--c--cchhhhcCCCCCceeEecccccccCC-CcceEEEE--eCc
Q 010842 261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACIC--P--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQP 330 (499)
Q Consensus 261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~ 330 (499)
.+-| +++|+++|++||+++++|++|+++.... + ..... .....-..+..+.+|+++.| ..+|++++ +++
T Consensus 184 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 262 (394)
T 2ay1_A 184 ANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI-ASRIPEVLIAASCSKNFGIYRERTGCLLALCADA 262 (394)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH-HHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHH-hhcCCCEEEEEeccCCCcCcCCccceEEEEeCCH
Confidence 9965 6688999999999999999998754310 0 01111 11111235577889999743 44699887 344
Q ss_pred hhH---HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842 331 GLL---VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 331 ~~l---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l 399 (499)
+.+ ...+... .... ..+ ...+..+++...+. .+.++++.++..++++++
T Consensus 263 ~~~~~l~~~~~~~---~~~~--------------~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 322 (394)
T 2ay1_A 263 ATRELAQGAMAFL---NRQT--------------YSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL 322 (394)
T ss_dssp HHHHHHHHHHHHH---HHTT--------------TSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---Hhhh--------------cCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 1111100 0000 000 02233333333331 246777788888889999
Q ss_pred HHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842 400 EGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476 (499)
Q Consensus 400 ~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~ 476 (499)
.+.|++.. ++++..+.....+.+.+ + ...+.+.+.+.|+. +.+ .+|+++. .+++
T Consensus 323 ~~~L~~~~~~~~~~~~~~~~g~~~~~~~-~------------~~~~~~~l~~~gi~-v~~-------~~Ris~~--~~~~ 379 (394)
T 2ay1_A 323 AGELRDLSGSDRFGFVAEHRGMFSRLGA-T------------PEQVKRIKEEFGIY-MVG-------DSRINIA--GLND 379 (394)
T ss_dssp HHHHHHHHTSSTTTHHHHCCSSEEECCC-C------------HHHHHHHHHHHCEE-CCT-------TCEEEGG--GCCT
T ss_pred HHHHHhcCCCCCeeEEcCCceEEEeeCC-C------------HHHHHHHHHhCCEE-ecC-------CCeEEee--cCCH
Confidence 99888763 35544322222322222 1 12344555566743 333 2699985 3789
Q ss_pred HHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEG 489 (499)
Q Consensus 477 ~di~~l~~~l~~~ 489 (499)
+++++++++|+++
T Consensus 380 ~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 380 NTIPILARAIIEV 392 (394)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHc
Confidence 9999999999876
No 187
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.81 E-value=1.8e-17 Score=170.00 Aligned_cols=320 Identities=13% Similarity=-0.013 Sum_probs=189.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842 125 PASTELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK 203 (499)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k 203 (499)
........++.++++++++... + ..++|+|||+|+..++.+++... + ++.+|+.....|.+...
T Consensus 82 ~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~-~-------~~~vi~~~~~yhg~~~~ 146 (439)
T 3dxv_A 82 SASNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT-G-------RSGVIAFAGAYHGCTVG 146 (439)
T ss_dssp SSEEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-C-------CCEEEEECCCCCCCcHH
Confidence 3445677788888999985432 2 35999999999999999886432 0 34455556666777666
Q ss_pred HHHHhCCCC-----------CCeEEeeCCCCCCCcc-----CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842 204 VCKLAGVSP-----------ANIRALPTSVDANFSL-----SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--- 264 (499)
Q Consensus 204 a~~~~G~g~-----------~~v~~v~~~~~~~~~~-----d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--- 264 (499)
++...|... ..+..+|.+.. +.. |+++|+++|++ .....+.+|++...++++|.+.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~ 222 (439)
T 3dxv_A 147 SMAFSGHSVQADAAKADGLILLPYPDPYRPY--RNDPTGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDG 222 (439)
T ss_dssp HHCC-------------CEEEECCCCSSSCB--TTBTTSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTT
T ss_pred HHhhcCCCchhhccccCCCCCCcEEcCCCcc--cccccHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHH
Confidence 655544310 01234454321 122 79999999851 11234567777777888999988
Q ss_pred -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842 265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY 343 (499)
Q Consensus 265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y 343 (499)
+++|+++|++||+++++|++|+++............++ ..|.+++ .|.++..+..|+++.+.+ +.+.+...
T Consensus 223 ~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~riG~~~~~~~--~~~~~~~~--- 294 (439)
T 3dxv_A 223 FLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILVL--GKGLGGGLPLSAVIAPAE--ILDCASAF--- 294 (439)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSCCEEEEEEHH--HHTSCSSS---
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEEE--cchhcCCcceEEEEECHH--HHhhhcCC---
Confidence 99999999999999999999986422111111111222 2677755 599886566888887643 22222110
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceE
Q 010842 344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFAL 419 (499)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~ 419 (499)
. ...+. ...+.+.+++..+..-.-+++.++..++.+++++.|++ .|.+..+ ++...+
T Consensus 295 ~-----------------~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~ 355 (439)
T 3dxv_A 295 A-----------------MQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLA 355 (439)
T ss_dssp S-----------------CCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTE
T ss_pred C-----------------cCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEE
Confidence 0 00111 23444444444432111134555666666666666654 4555443 334455
Q ss_pred EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
+.+.+.... ...........++.+.+.++|..+.... ....++|+++. ...|++++++++++|+++.+++.
T Consensus 356 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 356 CGMELVCDR-QSREPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTPP-LTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEEEEEEET-TTTEECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEEEecCc-cccCCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 556553211 0000013345677888888886543332 12367999984 77899999999999999987763
No 188
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.81 E-value=2.8e-18 Score=175.04 Aligned_cols=300 Identities=13% Similarity=0.092 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~ 205 (499)
.....++.+++++++|.+ ..++|+|||+|+..++.+++...... |. .+..|++ +...|.+...++
T Consensus 98 ~~~~~~l~~~la~~~g~~---------~v~~~~ggteA~~~al~~~~~~~~~~----~~~g~~~vi~~~~~yh~~~~~~~ 164 (420)
T 2pb2_A 98 NEPALRLGRKLIDATFAE---------RVLFMNSGTEANETAFKLARHYACVR----HSPFKTKIIAFHNAFHGRSLFTV 164 (420)
T ss_dssp CHHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred CHHHHHHHHHHHhhCCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhc----cCCCCCEEEEEeCCcCCcCHHHH
Confidence 345566667788888843 24999999999999999887532111 11 2224444 445566666666
Q ss_pred HHhCCC-------C--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc----cCChhHHHHHH
Q 010842 206 KLAGVS-------P--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA----VDNVEPLAEVA 272 (499)
Q Consensus 206 ~~~G~g-------~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~----id~l~~I~~ia 272 (499)
...|.. . ..+..+|. .|+++|+++|+++ +.+|+++.+++++|. .+++++|.++|
T Consensus 165 ~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~ 231 (420)
T 2pb2_A 165 SVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLC 231 (420)
T ss_dssp HHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHH
T ss_pred HhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHH
Confidence 666541 0 02445543 2899999988642 446777766666675 37899999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 352 (499)
++||+++++|++|.++......+.....++ ..|.+++ +|+++.+..+|+++++++ +.+.+... ...
T Consensus 232 ~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~--l~~~l~~~----~~~----- 297 (420)
T 2pb2_A 232 DEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE--IASAFHVG----SHG----- 297 (420)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH--HHTTCC--------C-----
T ss_pred HHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH--HHHhhcCC----CcC-----
Confidence 999999999999976432111111111233 3687765 699986677999988763 32222110 000
Q ss_pred CcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEec
Q 010842 353 SVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLN 425 (499)
Q Consensus 353 ~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~ 425 (499)
.+. ....+... .+++.+.. +++.++..++++++.+.|+++ |.+..+ ++...++.+.+.
T Consensus 298 -------~t~----~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~ 362 (420)
T 2pb2_A 298 -------STY----GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELK 362 (420)
T ss_dssp -------CEE----CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEEC
T ss_pred -------ccc----CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEEC
Confidence 001 11233333 34444432 456777778888888888764 433322 334456667664
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
... .....++.+.|.++|..+. +. +..++|+++. ..+|++|+++++++|+++.+++.
T Consensus 363 ~~~-------~~~~~~l~~~l~~~Gi~v~-~~---~~~~iRl~~~-~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 363 PKY-------KGRARDFLYAGAEAGVMVL-NA---GADVMRFAPS-LVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp GGG-------TTCHHHHHHHHHHTTEECE-ES---STTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCc-------hHHHHHHHHHHHHCCCEEE-eC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 310 0014567778888885433 32 2457999973 67899999999999999887764
No 189
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.81 E-value=2.3e-18 Score=174.24 Aligned_cols=233 Identities=15% Similarity=0.162 Sum_probs=164.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA 202 (499)
Q Consensus 123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ 202 (499)
..|...++|+. ++++.|.+. .+++++|++|+.. +..... ++..|+++...|.+..
T Consensus 65 ~~p~~~~l~~~----la~l~g~~~---------~~~~~sG~~Ai~~-~~~l~~-----------~gd~Vi~~~~~y~~~~ 119 (400)
T 3nmy_A 65 HNPTRFAYERC----VAALEGGTR---------AFAFASGMAATST-VMELLD-----------AGSHVVAMDDLYGGTF 119 (400)
T ss_dssp CCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHH-HHTTSC-----------TTCEEEEESSCCHHHH
T ss_pred CCHHHHHHHHH----HHHHhCCCC---------EEEecCHHHHHHH-HHHHcC-----------CCCEEEEeCCCchHHH
Confidence 45666666666 888888764 3888888888775 322111 4567888889998665
Q ss_pred HHHH-----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842 203 KVCK-----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI 277 (499)
Q Consensus 203 ka~~-----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~ 277 (499)
..+. ..|+ +++.++.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||+
T Consensus 120 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~ 183 (400)
T 3nmy_A 120 RLFERVRRRTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGL 183 (400)
T ss_dssp HHHHHTHHHHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred HHHHHhhHhhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence 5543 3588 88888764 889999988654 3488889999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cce-EEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCC-CLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354 (499)
Q Consensus 278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g-~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 354 (499)
++++|++|+.+....+. .. ++|.++.+.+|+++.|. -+| ++++++++.. +.+.....+
T Consensus 184 ~livDe~~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~-~~l~~~~~~----------- 244 (400)
T 3nmy_A 184 LTVVDNTFASPMLQRPL----SL---GADLVVHSATKYLNGHSDMVGGIAVVGDNAELA-EQMAFLQNS----------- 244 (400)
T ss_dssp EEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH-HHHHHHHHH-----------
T ss_pred EEEEECCCcccccCChh----hc---CCcEEEecCccccCCCCCcceeEEEEeCCHHHH-HHHHHHHHh-----------
Confidence 99999999865443221 11 48999999999998773 245 4555555433 222111000
Q ss_pred ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------c
Q 010842 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------F 417 (499)
Q Consensus 355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~ 417 (499)
.+.....+..|+.++.+ +.+..++++..++++++.+.|++.|.++-+..|. .
T Consensus 245 ---------~g~~~~~~~a~~~l~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G 313 (400)
T 3nmy_A 245 ---------IGGVQGPFDSFLALRGL--KTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFG 313 (400)
T ss_dssp ---------HCCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred ---------cCCCCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCC
Confidence 11122456677777654 6678889999999999999999999887553332 3
Q ss_pred eEEEEEecC
Q 010842 418 ALVCFRLNP 426 (499)
Q Consensus 418 ~~v~f~~~~ 426 (499)
.+++|.+.+
T Consensus 314 ~~~~~~l~~ 322 (400)
T 3nmy_A 314 GIVSIVLKG 322 (400)
T ss_dssp SEEEEEETT
T ss_pred ceEEEEeCC
Confidence 578888754
No 190
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=1.3e-19 Score=186.62 Aligned_cols=282 Identities=14% Similarity=0.148 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----H
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----C 205 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~ 205 (499)
..+++.+++++++|.+. .+++++|++|+..++. .. . ++..|+++...|.++... +
T Consensus 134 ~~~~l~~~la~~~g~~~---------~i~~~sGt~al~~~l~-~~----~-------~Gd~Vi~~~~~y~~~~~~~~~~~ 192 (464)
T 1ibj_A 134 TRDALESLLAKLDKADR---------AFCFTSGMAALSAVTH-LI----K-------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_dssp HHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHT-TS----C-------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHH-Hh----C-------CCCEEEEECCCchhHHHHHHHHH
Confidence 56778888999999763 3888899988765543 11 1 466788899999888764 4
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+..|. +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus 193 ~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~ 256 (464)
T 1ibj_A 193 PRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI 256 (464)
T ss_dssp GGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred HHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence 56788 88888763 889999988643 458889999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCceeEecccccccCCCcc--eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC--CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~--g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
+.+....+. . . ++|.++.++||++++|.|+ |+++++++... +.+.....+.
T Consensus 257 ~~g~~~~~~-----~-~-~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~-~~l~~~~~~~------------------- 309 (464)
T 1ibj_A 257 MSPVLSRPL-----E-L-GADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYFLQNSE------------------- 309 (464)
T ss_dssp TCTTTCCGG-----G-T-TCSEEEEETTTTTTCSSCCCCEEEEECSHHHH-HHHHHHHHHT-------------------
T ss_pred cccccCChh-----h-c-CCEEEEECCcccccCCCCCcEEEEEEChHHHH-HHHHHHHHhc-------------------
Confidence 765332111 1 1 4899999999999988765 99988864432 2221100000
Q ss_pred CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc--------------CCCeEEEcCC---CceEEEEEecC
Q 010842 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS--------------DPRFEIVVPR---HFALVCFRLNP 426 (499)
Q Consensus 364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~--------------~~~~~~~~~~---~~~~v~f~~~~ 426 (499)
+.....+..|++++.+ +.+..+.++..+++..+.+.|++ +|++++..+. ..++++|.+.+
T Consensus 310 -g~~~~~~~~~a~~~al--~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~ 386 (464)
T 1ibj_A 310 -GSGLAPFDCWLCLRGI--KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_dssp -TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred -CCCCCHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence 0011245566666554 23333344444444444444443 3444443322 24678887732
Q ss_pred CCCCCcchhHHHHHHHHHHHHhcCCEEEEee------------e---------ECC--EEEEEEeccCCCCcHHHHHHHH
Q 010842 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHT------------I---------VGG--LYMLRFAVGASLTDERHVVAAW 483 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------~---------~~g--~~~lRi~~~~~~~t~~di~~l~ 483 (499)
.....++.+.|...|+.+..+. . ..| ..++|+++. . +|+++++
T Consensus 387 ---------~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg-~----edi~~li 452 (464)
T 1ibj_A 387 ---------VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG-I----EDVDDLI 452 (464)
T ss_dssp ---------HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC-S----SCHHHHH
T ss_pred ---------HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC-C----CCHHHHH
Confidence 1223456666544432211110 0 011 357999996 2 7899999
Q ss_pred HHHHHHHHH
Q 010842 484 ELIMEGADR 492 (499)
Q Consensus 484 ~~l~~~~~~ 492 (499)
+.|+++.++
T Consensus 453 ~~L~~al~~ 461 (464)
T 1ibj_A 453 SDLDIAFKT 461 (464)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 999988654
No 191
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.81 E-value=1.8e-18 Score=176.55 Aligned_cols=316 Identities=12% Similarity=0.008 Sum_probs=193.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH-HHHHHHHHHHHhHhhhhcc------CCeEEE
Q 010842 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL-VTLIAARDRALDAVGAENM------HKLVVY 192 (499)
Q Consensus 120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~-~al~~ar~~~~~~~~~~g~------~~~~i~ 192 (499)
.|....+..+++++ +++++|.+.+ ..++|+|++++++ ..+..+... + ...|. ++..|+
T Consensus 71 ~Y~~~~G~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~--~~~g~~~~~~~d~~~Vl 135 (422)
T 3d6k_A 71 NYGGLLGIADIREL----WAEALGLPAD-------LVVAQDGSSLNIMFDLISWSYTW--G--NNDSSRPWSAEEKVKWL 135 (422)
T ss_dssp SSCCSSCCHHHHHH----HHHHHTCCGG-------GEEECSSCHHHHHHHHHHHHHHH--C--CTTCSSCGGGSSCCEEE
T ss_pred CCCCCCCCHHHHHH----HHHHhCCChh-------HEEEecchHHHHHHHHHHHHhcC--c--ccccccccccCCCCEEE
Confidence 56555557777777 5555577654 4688999999873 333222211 0 00000 123688
Q ss_pred cCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE-EecCCCcccccCChh---HH
Q 010842 193 GSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC-ATVGTTSTTAVDNVE---PL 268 (499)
Q Consensus 193 ~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv-~t~gtt~~G~id~l~---~I 268 (499)
++.++|..+..+++..|. +++.+|++++ .+|+++|++++++. .+.+|+ ...++|+||.+-+.+ +|
T Consensus 136 ~~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l 204 (422)
T 3d6k_A 136 CPVPGYDRHFTITEHFGF---EMINVPMTDE---GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCREL 204 (422)
T ss_dssp EEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred EeCCccHHHHHHHHHcCC---EEEecCCCCC---CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHH
Confidence 889999999999999999 9999999864 39999999988531 233555 678899999998776 78
Q ss_pred HHHHH-HhCCEEEeeccccchhccCc--cchhhh-----cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 269 AEVAN-EYGIWVHVDAAYAGSACICP--EFRHYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 269 ~~ia~-~~~~~lhvD~A~g~~~~~~~--~~~~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
+++|+ +||+++++|++|+...+..+ ...... .+....+.+..+++|++.....+|+++.+. +.. +.+...
T Consensus 205 ~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~-~l~-~~l~~~ 282 (422)
T 3d6k_A 205 AEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK-ENI-EWYASH 282 (422)
T ss_dssp HHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH-HHH-HHHHHH
T ss_pred HHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH-HHH-HHHHHH
Confidence 88888 99999999999974211111 111110 122235677888999944335689988763 222 222211
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHh----cCCCeEE
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVK----SDPRFEI 411 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~ 411 (499)
..... .....+...++...+.. +.+++..++..+..+++.+.|. +.+++++
T Consensus 283 ~~~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~ 342 (422)
T 3d6k_A 283 ANVRG--------------------IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKW 342 (422)
T ss_dssp HHHHC--------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred HHhhc--------------------CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEE
Confidence 00000 01123444555555533 2344444444445555555554 3444666
Q ss_pred EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E-----CCEEEEEEeccCCCCcHHHHHHHHHH
Q 010842 412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V-----GGLYMLRFAVGASLTDERHVVAAWEL 485 (499)
Q Consensus 412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lRi~~~~~~~t~~di~~l~~~ 485 (499)
..+.....+++.+.... ...+.+.+.++|+.+...+. + .+..++|+++. . ++++++++++++
T Consensus 343 ~~p~~g~~~~~~~~~~~----------~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~-~-~~~e~i~~~~~~ 410 (422)
T 3d6k_A 343 TSPTGGYFISVDVVPGT----------ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPS-L-PPVAELEVAMDG 410 (422)
T ss_dssp CCCSBSSCEEEEESTTC----------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHHHH
T ss_pred eCCCcceEEEEECCCCC----------HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecC-C-CCHHHHHHHHHH
Confidence 54445555666664311 34566677777854433122 2 13578999996 4 899999999999
Q ss_pred HHHHHHHHhc
Q 010842 486 IMEGADRLFK 495 (499)
Q Consensus 486 l~~~~~~l~~ 495 (499)
|+++.+++..
T Consensus 411 l~~~l~~~~~ 420 (422)
T 3d6k_A 411 FATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 192
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.80 E-value=1.3e-18 Score=182.66 Aligned_cols=363 Identities=7% Similarity=0.025 Sum_probs=215.7
Q ss_pred hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHc-C-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATML-K-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~-g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
+|.++.++....... ..+....+..++++++.+++.+.+ + .+... ....++|+|||+|+..++.+...+..-
T Consensus 117 ~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~l~ 190 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENHLL 190 (533)
T ss_dssp HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhhcc
Confidence 566776666555432 122345577899999999997773 3 32110 014689999999998887763221100
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC--CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV--DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
.++..|+++..+|.++..+++..|. .++.+|++. +.++.+|+++|++++.++ +.+|+++.++|
T Consensus 191 ------~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~N 255 (533)
T 3f6t_A 191 ------KKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTN 255 (533)
T ss_dssp ------CTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCT
T ss_pred ------CCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCC
Confidence 1467899999999999999999999 999999864 445899999999988543 34788889999
Q ss_pred cccccCChh---HHHHHHH-HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchh
Q 010842 258 STTAVDNVE---PLAEVAN-EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL 332 (499)
Q Consensus 258 ~~G~id~l~---~I~~ia~-~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~ 332 (499)
++|.+-+.+ +|+++|+ +||+++++|.+|+.+.......... ....+.++.+.+|.++.| ..+|+++.++...
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence 999997665 8888888 5899999999998764322221111 123568889999999744 3489998887643
Q ss_pred HHHhhcCCcc---------CCCCCCCCCCCcccC--------CCcccCCCCCCCcHHHHH----HHHHh--------cHH
Q 010842 333 LVKALSTDPE---------YLKNKPSESNSVVDF--------KDWQVGTGRRFKSLRLWM----VLRSY--------GVL 383 (499)
Q Consensus 333 l~~~~~~~~~---------yl~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l~~~--------g~~ 383 (499)
+.+....-++ |-..... .....+ .......+.........+ ++..+ ..+
T Consensus 333 ~~~li~~l~~~~~~~~~~~~~~~~~~--p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~ 410 (533)
T 3f6t_A 333 FDDNIAHLDKVELRQLHKRYSSVVLD--PDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDP 410 (533)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHTTCSC--GGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCH
T ss_pred HHHHHHhcchhhHHHHHhhhhccccC--cchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHH
Confidence 3222211100 0000000 000000 000000000111222222 33333 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE-EEecCCCCC-Ccchh------HHHHHHHHHHHH-hcCCEEE
Q 010842 384 NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC-FRLNPYPHS-GSADT------EMLNRKLLDWVN-STGRVYL 454 (499)
Q Consensus 384 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~-f~~~~~~~~-~~~~~------~~~~~~l~~~l~-~~g~~~~ 454 (499)
.++++.++..++++++.+.|. . ++++. .+..+.+. +.+...... ..... +....++..++. +.|+.+.
T Consensus 411 ~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~ 487 (533)
T 3f6t_A 411 YIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLV 487 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEe
Confidence 567777888888999999997 5 45433 34433333 333210000 00000 001224444444 5676544
Q ss_pred EeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 455 THTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 455 ~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
.+..+. +..++|+++++ .++++|++++++|.++.+++.+
T Consensus 488 pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 488 DGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp TTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHHHHH
Confidence 433332 24689999953 5788999999999999887643
No 193
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.80 E-value=3.1e-19 Score=180.46 Aligned_cols=320 Identities=12% Similarity=0.053 Sum_probs=198.7
Q ss_pred HHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHh
Q 010842 105 FLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 105 ~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~ 179 (499)
.+.+.+...+.. ....|...++..++++++.+|+.+..+. +.+ ..++ |+|||+|+..++.+.+...
T Consensus 48 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~-- 118 (396)
T 2q7w_A 48 SVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKNT-- 118 (396)
T ss_dssp HHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHhC--
Confidence 344455544322 2335655666788888877776543222 122 2466 9999999988887654210
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
++..|+++..+|..+...++..|. +++.+|.++.+++.+|+++|++++++. .....+++.+.++|+|
T Consensus 119 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~npt 185 (396)
T 2q7w_A 119 -------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPT 185 (396)
T ss_dssp -------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTT
T ss_pred -------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence 456788889999999999999999 999999853224789999999998642 1123567789999999
Q ss_pred cccCC---hhHHHHHHHHhCCEEEeeccccchhccC-ccchhh--hcCCCCCceeEecccccccCC-CcceEEEE--eCc
Q 010842 260 TAVDN---VEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQP 330 (499)
Q Consensus 260 G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~ 330 (499)
|.+-+ +++|+++|++||+++++|++|+++.... ...... +......+.++.+.+|+++.| ..+|++++ +++
T Consensus 186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 265 (396)
T 2q7w_A 186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS 265 (396)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence 99954 6689999999999999999998754311 011111 111112346788899999743 34788886 344
Q ss_pred h---hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842 331 G---LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 331 ~---~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l 399 (499)
+ .+...+......... . ...+..+++...+. .+.+++..++..++++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-----------------~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 266 ETVDRAFSQMKAAIRANYS-----------------N---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp HHHHHHHHHHHHHHHTTTS-----------------S---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccC-----------------C---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 122211110000000 0 12344444444442 245667777888899999
Q ss_pred HHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842 400 EGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476 (499)
Q Consensus 400 ~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~ 476 (499)
.+.|++.. ++++.. |..+.+.+. ... ...+.+.+.+.|.. +.+ .+|++++ . .|+
T Consensus 326 ~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~~l~~~gv~-v~~-------~~Ris~~-~-~~~ 382 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFII-KQNGMFSFS--GLT----------KEQVLRLREEFGVY-AVA-------SGRVNVA-G-MTP 382 (396)
T ss_dssp HHHHHHTTCCSCCTHHH-HCCSSEEEC--CCC----------HHHHHHHHHHHCEE-CCT-------TCEEEGG-G-CCT
T ss_pred HHHHHhcCCCCCcceec-CCCceEEEe--cCC----------HHHHHHHHHhcCee-ecC-------CceEEEe-e-cCH
Confidence 99998874 355442 333334332 111 12344445566743 333 2799996 3 388
Q ss_pred HHHHHHHHHHHHH
Q 010842 477 RHVVAAWELIMEG 489 (499)
Q Consensus 477 ~di~~l~~~l~~~ 489 (499)
+++++++++|+++
T Consensus 383 e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 383 DNMAPLCEAIVAV 395 (396)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 194
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.80 E-value=4.9e-17 Score=166.28 Aligned_cols=309 Identities=9% Similarity=-0.014 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHHHHhC
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVCKLAG 209 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~~~~G 209 (499)
..++.+.++++++.+.+ ..++|+|||+|+..++.+++..... .|.++..|+++.. .|.+...++...|
T Consensus 88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~~~----~g~~~~~vi~~~~~yh~~~~~~~~~~~ 156 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQA----KGEARQRFLTFRNGYHGDTFGAMSVCD 156 (429)
T ss_dssp HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHH----HTCCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCCCCCchhhhhhcC
Confidence 34455668888886543 4699999999999999877642210 0223445555554 4655444444333
Q ss_pred CC----------CCCeEEeeCCCC---CCC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCcccccCC----hhHHHH
Q 010842 210 VS----------PANIRALPTSVD---ANF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAVDN----VEPLAE 270 (499)
Q Consensus 210 ~g----------~~~v~~v~~~~~---~~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~ 270 (499)
.. ...+..++++.. +.+ .+|+++|+++|++. ...+.+|+++.. ++++|.+.| +++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~ 233 (429)
T 1s0a_A 157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK 233 (429)
T ss_dssp TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 10 114566666421 123 68999999999752 112345665555 688998766 999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYLKNKP 348 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~ 348 (499)
+|++||+++|+|++|+++............++ ..|.++++ |+++.+ .++|+++.+++ .. +.+.... ..+..
T Consensus 234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~~-~~-~~l~~~~~~~~~~-- 306 (429)
T 1s0a_A 234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTRE-VA-ETISNGEAGCFMH-- 306 (429)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECHH-HH-HHHHTSTTSSCSC--
T ss_pred HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCHH-HH-HHhhcCCCccccc--
Confidence 99999999999999976432111111111122 36877765 888877 78999988653 22 3332210 00000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEE
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCF 422 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f 422 (499)
..+.....+...+ +++.+.. ++..++..++++++.+.|+++ |++..+ ++..+++.+
T Consensus 307 --------------~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~ 368 (429)
T 1s0a_A 307 --------------GPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVV 368 (429)
T ss_dssp --------------CCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEE
T ss_pred --------------CCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEE
Confidence 0011112333333 3333322 245677778888999888775 566533 233446666
Q ss_pred EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.+.... + ..++.+.|.++|+. +.+. + .++|+++. ..+|++|+++++++|+++.+++
T Consensus 369 ~~~~~~-------~--~~~l~~~l~~~Gi~-v~~~---~-~~iRis~~-~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 369 ETTHPV-------N--MAALQKFFVEQGVW-IRPF---G-KLIYLMPP-YIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp EESSCB-------C--HHHHHHHHHHTTEE-CCCB---T-TEEEECCC-TTCCHHHHHHHHHHHHHHTSSG
T ss_pred EECCcc-------c--HHHHHHHHHHCCCE-Eecc---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 664310 0 34577777777843 3332 2 57999973 6789999999999999876543
No 195
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.80 E-value=9.7e-18 Score=165.69 Aligned_cols=293 Identities=11% Similarity=0.059 Sum_probs=193.6
Q ss_pred HHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcC---CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842 104 GFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLK---LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179 (499)
Q Consensus 104 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g---~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~ 179 (499)
..+.+.+...+. .....|.. +...+++++ +++++| .+.+ ..++|+|+|+|+..++.+.
T Consensus 35 ~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~----la~~~~~~~~~~~-------~v~~~~G~~~al~~~~~~~------ 96 (335)
T 1uu1_A 35 EDLVDEVFRRLNSDALRIYYD-SPDEELIEK----ILSYLDTDFLSKN-------NVSVGNGADEIIYVMMLMF------ 96 (335)
T ss_dssp HHHHHHHHHTCCGGGGGSCCC-SSCHHHHHH----HHHHHTCSSCCGG-------GEEEESSHHHHHHHHHHHS------
T ss_pred HHHHHHHHHHhhhhhhhcCCC-CchHHHHHH----HHHHcCCCCCCHH-------HEEEcCChHHHHHHHHHHh------
Confidence 344555555552 12223322 335566666 666666 5443 4689999999988777654
Q ss_pred HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
+..|+++ .+|..+...++..|. +++.+|.++ +|.+|+++| + .+.+|+++.++|+|
T Consensus 97 --------gd~Vl~~-p~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~npt 151 (335)
T 1uu1_A 97 --------DRSVFFP-PTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPT 151 (335)
T ss_dssp --------SEEEECS-SSCHHHHHHHHHHTC---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTT
T ss_pred --------CCcEEEC-CCcHHHHHHHHHcCC---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCC
Confidence 2358888 999999999999999 999999864 368888887 1 24477778999999
Q ss_pred cccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842 260 TAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 260 G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~ 338 (499)
|.+-|.++|.++++.+| ++++|++|+.+... ...... +....+.++.+.+|+++.| ..+|+++.++ +.. +.+.
T Consensus 152 G~~~~~~~l~~l~~~~~-~li~De~~~~~~~~--~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~ 225 (335)
T 1uu1_A 152 GHVFEREEIERILKTGA-FVALDEAYYEFHGE--SYVDFL-KKYENLAVIRTFSKAFSLAAQRVGYVVASE-KFI-DAYN 225 (335)
T ss_dssp CCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC--CCGGGG-GTCSSEEEEEESTTTTTCGGGCCEEEEECH-HHH-HHHH
T ss_pred CCCCCHHHHHHHHHhCC-EEEEECcchhhcch--hHHHHh-hhCCCEEEEecchhhcCCcccCeEEEEeCH-HHH-HHHH
Confidence 99999999999999989 99999999865321 111111 1123567889999999744 4579988843 322 2221
Q ss_pred C-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 339 T-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 339 ~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
. ...| ....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++.
T Consensus 226 ~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~ 280 (335)
T 1uu1_A 226 RVRLPF-----------------------NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR 280 (335)
T ss_dssp HHSCTT-----------------------CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred HhcCCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCC
Confidence 1 1000 112334444444432 2467788888899999999999887 67653 445
Q ss_pred ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
.+.+.+.+.. ....++.+.|.++|+.+ .+ +..++|++++ +.+|+++++++|+++
T Consensus 281 ~~~~~~~~~~----------~~~~~~~~~l~~~gi~v-~~----~~~~iRis~~----~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 281 GNFVFVFMEK----------EEKERLLEHLRTKNVAV-RS----FREGVRITIG----KREENDMILRELEVF 334 (335)
T ss_dssp SSEEEEECCT----------HHHHHHHHHHHHHTEEE-EE----ETTEEEEECC----CHHHHHHHHHHHHCC
T ss_pred CeEEEEECCC----------CCHHHHHHHHHHCCEEE-EE----CCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 5566665532 11456777777778544 33 2347999985 367899999988753
No 196
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.80 E-value=2.5e-17 Score=168.69 Aligned_cols=300 Identities=9% Similarity=0.030 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CC-eEEEcCC-CCchhHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HK-LVVYGSD-QTHSTFAKV 204 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~-~~i~~s~-~~H~s~~ka 204 (499)
.....++.+.+++++|.+. .++++|||+||..++.+++...... .|. ++ ..|++.+ ..|.+...+
T Consensus 106 ~~~~~~l~~~la~~~g~~~---------v~~~~sGseA~~~al~~a~~~~~~~---~g~~~gr~~vi~~~~~yhg~~~~~ 173 (433)
T 1z7d_A 106 SVPLGICERYLTNLLGYDK---------VLMMNTGAEANETAYKLCRKWGYEV---KKIPENMAKIVVCKNNFSGRTLGC 173 (433)
T ss_dssp EHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHT---SCCCTTCCEEEEETTC--------
T ss_pred CHHHHHHHHHHHhhcCCCe---------EEEeCCHHHHHHHHHHHHHHHhhhc---cCCCCCCCeEEEEeCCcCCcchhh
Confidence 3444555566888887432 4999999999999999887432110 011 12 4455554 445555555
Q ss_pred HHHhCC-------CC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHH
Q 010842 205 CKLAGV-------SP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEV 271 (499)
Q Consensus 205 ~~~~G~-------g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~i 271 (499)
+...|. +. ..++.+|. .|+++|+++|+. ..+.+|+++...+++|.+. ++++|.++
T Consensus 174 ~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l 241 (433)
T 1z7d_A 174 ISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDI 241 (433)
T ss_dssp ------------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHH
T ss_pred hcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHH
Confidence 555441 10 14555553 289999999851 1244666665556688764 79999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842 272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE 350 (499)
Q Consensus 272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 350 (499)
|++||++|++|++|.++......+.....++ ..|.+++ .|+++.. ...|+++.+++ +.+.+.. ....
T Consensus 242 ~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~~G~v~~~~~--~~~~l~~---~~~~---- 309 (433)
T 1z7d_A 242 CKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVILL--GKALSGGHYPISAVLANDD--IMLVIKP---GEHG---- 309 (433)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEECHH--HHTTCCT---TCCC----
T ss_pred HHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEEE--CccccCCCCCeEEEEECHH--HHhhhcc---cccc----
Confidence 9999999999999976432111111111232 3687755 5999865 56899888753 2222211 0000
Q ss_pred CCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEE
Q 010842 351 SNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFR 423 (499)
Q Consensus 351 ~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~ 423 (499)
.+-....+...+ +++.+.. +++.++..++++++.+.|+++ |.+..+ ++..+++.+.
T Consensus 310 -------------~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~ 372 (433)
T 1z7d_A 310 -------------STYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIE 372 (433)
T ss_dssp -------------CTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEE
T ss_pred -------------ccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEE
Confidence 000112333333 3443322 245667777888888887653 433322 2344566776
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+.... ....++.+.|.++|..+ .+. +..++|+++. ..+|++||++++++|+++.+++
T Consensus 373 ~~~~~--------~~~~~~~~~l~~~Gv~v-~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 373 FKNEL--------VNVLDICLKLKENGLIT-RDV---HDKTIRLTPP-LCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp ECTTT--------CCHHHHHHHHHHTTEEC-CEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred EccCh--------hHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHH
Confidence 65320 01356778888888543 332 3457999884 7789999999999999988775
No 197
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.79 E-value=2.7e-17 Score=168.27 Aligned_cols=330 Identities=13% Similarity=0.042 Sum_probs=179.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHH-
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKV- 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka- 204 (499)
......++.+|+++.++.+.+ ..++|+|||+|+..++.+++...... |. ++..|++.+.+++.....
T Consensus 70 ~~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~ 138 (430)
T 3i4j_A 70 SSDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER----GEPGRFKVITRVPSYHGASLGS 138 (430)
T ss_dssp EEHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTC--------
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCcEEEEEeCCcCCCCccc
Confidence 345667778889999987543 36999999999999999887543221 21 244555555554443332
Q ss_pred HHHhCCCC---------C--CeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC----hhH
Q 010842 205 CKLAGVSP---------A--NIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN----VEP 267 (499)
Q Consensus 205 ~~~~G~g~---------~--~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~----l~~ 267 (499)
....|... . .+..+|.+.. .....|+++|+++|++.. ...+.+|+++..++ ++|.+-+ +++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~ 216 (430)
T 3i4j_A 139 LAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYER 216 (430)
T ss_dssp -----------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHH
T ss_pred ccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHH
Confidence 22222100 0 3344554321 002457899999997531 02345666666667 8888776 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYL 344 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl 344 (499)
|+++|++||+++|+|++|.++......+..... ++ ..|.++++ |.++.. ...|+++.+++ .. +.+.... .+.
T Consensus 217 l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~G~~r~G~~~~~~~-i~-~~~~~~~~~~~ 291 (430)
T 3i4j_A 217 VRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAAGYAPLAGLLAAPQ-VY-ETVMGGSGAFM 291 (430)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTTTSSCCEEEEECHH-HH-HHHHHTTCBCC
T ss_pred HHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccCCccccEEEEECHH-HH-HHHhccCCccc
Confidence 999999999999999999875332111111111 32 25777765 998765 55788877443 22 3332211 111
Q ss_pred CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEE
Q 010842 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALV 420 (499)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v 420 (499)
.. .+.....+...+++..+..-.-+++.++..++.+++++.| .+.|.+..+ ++..+++
T Consensus 292 ~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~ 353 (430)
T 3i4j_A 292 HG-----------------FTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLL 353 (430)
T ss_dssp CC-----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEE
T ss_pred cc-----------------CCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEE
Confidence 11 0111234444444444321011233444444444444444 456766654 3444566
Q ss_pred EEEecCCCCCCcchh-HHHHHHHHHHHHhcCCEEEEee-eE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 421 CFRLNPYPHSGSADT-EMLNRKLLDWVNSTGRVYLTHT-IV--GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 421 ~f~~~~~~~~~~~~~-~~~~~~l~~~l~~~g~~~~~~~-~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+.+.+.. ...... .....++.+.+.++|.++.... .. .+..++|+++. ...|++++++++++|+++.+++.
T Consensus 354 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 354 GVVLGDLA-TGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp EEEEC-------------CHHHHHHHHHHTTEECC-----------CEEEECCC-TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecccc-ccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHhh
Confidence 66654211 000000 1113567888888886543321 11 13467999984 67899999999999999987653
No 198
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.79 E-value=6.4e-17 Score=164.95 Aligned_cols=299 Identities=10% Similarity=-0.002 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCK 206 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~ 206 (499)
....++.+.+++++|.+ .+ ..++|+||++|+..++.+++.. .+..|++.. ..|.+...++.
T Consensus 86 ~~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~----------~~~~vi~~~p~yh~~~~~~~~ 148 (419)
T 2eo5_A 86 IPQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNT----------GRKYIIAFLGGFHGRTFGSIS 148 (419)
T ss_dssp HHHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTT----------SCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHh----------hCCcEEEECCCcCCCCHhhHh
Confidence 34455667799999985 33 3599999999999999887642 133455544 45656655555
Q ss_pred HhCC--------C--CCCeEEeeCCCCCCCc----------------cCHHHHH-HHHHHHHHcCCccEEEEEecCCCcc
Q 010842 207 LAGV--------S--PANIRALPTSVDANFS----------------LSPQLLR-RAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 207 ~~G~--------g--~~~v~~v~~~~~~~~~----------------~d~~~L~-~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
..|. + ...++.+|.+. .|+ +|+++|+ +++++.. ....+.+|+++..++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~t 225 (419)
T 2eo5_A 149 LTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEG 225 (419)
T ss_dssp HCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTT
T ss_pred hcCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCC
Confidence 4331 1 12577888753 233 4788999 8887420 00123455555545668
Q ss_pred cccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842 260 TAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV 334 (499)
Q Consensus 260 G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~ 334 (499)
|.+-+ +++|+++|++||+++|+|++|.++............++ ..|.++++ |.++.+ ..+|+++.+++- .
T Consensus 226 G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~riG~~~~~~~~-~- 300 (419)
T 2eo5_A 226 GYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVITLA--KALGGGIMPIGATIFRKDL-D- 300 (419)
T ss_dssp TSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEEEGGG-C-
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEEec--ccccCCccceEEEEEchHh-h-
Confidence 98666 99999999999999999999986532211111111122 35777654 888866 788999887631 1
Q ss_pred HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842 335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414 (499)
Q Consensus 335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 414 (499)
.+ . ... ..+-....+...+++..+. .+++..++..++++++.+.|+++ +..+ +
T Consensus 301 -~~-~--~~~------------------~~t~~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~-~ 353 (419)
T 2eo5_A 301 -FK-P--GMH------------------SNTFGGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDV-R 353 (419)
T ss_dssp -CC---------------------------CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEE-E
T ss_pred -cC-C--ccc------------------CCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhhe-E
Confidence 11 0 000 0011112344444444431 22337778888999999999876 2222 3
Q ss_pred CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+..+++.+.+.+. ..... +.+.|.++|..+... +..++|+++ +..+|++++++++++|+++.+++
T Consensus 354 ~~g~~~~i~~~~~--------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~-~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 354 GIGLAWGLEYNEK--------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIP-PLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EETTEEEEECSCH--------HHHHH-HHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred eeeEEEEEEEecC--------ccHHH-HHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 3445666666331 12245 778888888544332 235799988 47789999999999999987653
No 199
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.78 E-value=1.3e-17 Score=169.21 Aligned_cols=252 Identities=10% Similarity=0.060 Sum_probs=171.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTF 201 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~ 201 (499)
+..++|+. +++++|.+.. ++ ++|||+||..++.+..+ ++..|+++. ..|...
T Consensus 74 ~~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~ 129 (427)
T 3i16_A 74 GRDSLDAV----YARVFNTESA---------LVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTL 129 (427)
T ss_dssp HHHHHHHH----HHHHHTCSEE---------EEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGG
T ss_pred HHHHHHHH----HHHHhCCcce---------EEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHH
Confidence 34556654 9999998764 66 89999999888776532 567788887 777766
Q ss_pred H-----------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChh
Q 010842 202 A-----------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVE 266 (499)
Q Consensus 202 ~-----------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~ 266 (499)
. +.++..|+ +++.+|.++++ .+|+++|++++++. ..+.+|+++. ++|++|.+.|++
T Consensus 130 ~~~~g~~~~~~~~~l~~~G~---~~~~v~~~~~g--~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~ 200 (427)
T 3i16_A 130 HDVIGITENSNMGSLKEFGI---NYKQVDLKEDG--KPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIK 200 (427)
T ss_dssp HHHHTCSCCCSSCCTGGGTC---EEEECCCCTTS--SCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHH
T ss_pred HHHHhccccchHHHHHHcCC---EEEEecCccCC--CcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHH
Confidence 5 33455688 89999987654 89999999999720 1234788887 899999999999
Q ss_pred HHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcC--C
Q 010842 267 PLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALST--D 340 (499)
Q Consensus 267 ~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~--~ 340 (499)
+|+++|++ +|+++|||++|+.+..... .... .+|.++.+.||+++.+. .+|+++.++ +.. +.+.. .
T Consensus 201 ~i~~la~~~~~g~~livD~a~~~~~~~~~---p~~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~-~li-~~l~~~~~ 272 (427)
T 3i16_A 201 SIVDCVKNIRKDIICFVDNCYGEFMDTKE---PTDV---GADLIAGSLIKNIGGGIAPTGGYLAGTK-DCI-EKTSYRLT 272 (427)
T ss_dssp HHHHHHHHHCTTSEEEEECTTTTTSSSSC---GGGG---TCSEEEEETTSGGGTTTCCSCEEEEECH-HHH-HHHHHHHS
T ss_pred HHHHHHHHhCCCCEEEEECCCccccccCC---cccc---CCeEEEecCcccCCCCCCceEEEEEECH-HHH-HHHHHhcc
Confidence 99999999 9999999999987642211 1111 48999999999998742 347776653 332 22211 1
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce--
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-- 418 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-- 418 (499)
...+. ...+..+. ..|..++.+ ..+..++++..+++.++++.|+++ ++++... ...
T Consensus 273 ~~~~g----------------~~~~~~~~--~a~~~l~gl--~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~ 330 (427)
T 3i16_A 273 VPGIG----------------GECGSTFG--VVRSMYQGL--FLAPHISMEALKGAILCSRIMELA-GFEVMPK-YDEKR 330 (427)
T ss_dssp CTTTG----------------GGCCCCTT--CHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCC
T ss_pred cCccC----------------ccCCccHH--HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCC
Confidence 11111 11111111 135554433 556788899999999999999998 5677532 333
Q ss_pred ---EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 419 ---LVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 419 ---~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
++.|.+.. .+...++++.|...
T Consensus 331 ~~~i~~i~l~~---------~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 331 SDIIQSIKFND---------KDKLIEFCKGIQTG 355 (427)
T ss_dssp SSSCEEEECSS---------HHHHHHHHHHHHHT
T ss_pred ccEEEEEEECC---------HHHHHHHHHHHhhc
Confidence 67777753 33456677776654
No 200
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.78 E-value=6.3e-17 Score=166.00 Aligned_cols=297 Identities=11% Similarity=0.037 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--C-CeEEEcCCCCchhHHHHHHH
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--H-KLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~-~~~i~~s~~~H~s~~ka~~~ 207 (499)
..++.+++++++|.+. .++++|||+|+..++.+++...... .|. . +.+|+.....|.+...++..
T Consensus 120 ~~~l~~~la~~~g~~~---------v~~~~sGseA~~~al~~~~~~~~~~---~g~~~g~~~vi~~~~~yhg~~~~~~~~ 187 (439)
T 2oat_A 120 LGEYEEYITKLFNYHK---------VLPMNTGVEAGETACKLARKWGYTV---KGIQKYKAKIVFAAGNFWGRTLSAISS 187 (439)
T ss_dssp HHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHT---TCCCTTCCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHHHhcCCCE---------EEEeCCHHHHHHHHHHHHHHHhhhc---cCCCCCCCeEEEEcCCCCCCCHhHhhc
Confidence 3444455777777432 4899999999999999887532110 011 1 23444444556666666655
Q ss_pred hC-------CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHHHHH
Q 010842 208 AG-------VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEVANE 274 (499)
Q Consensus 208 ~G-------~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~ia~~ 274 (499)
.| .+. ..++.+|. .|+++|+++|+. ..+.+|++...++++|.+. ++++|.++|++
T Consensus 188 ~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 255 (439)
T 2oat_A 188 STDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTR 255 (439)
T ss_dssp CCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 44 111 15666664 289999998851 1244666665556688765 79999999999
Q ss_pred hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
||+++++|++|.++......+.....++ ..|.+++ .|+++.. ...|+++.+++ +.+.+.. ....
T Consensus 256 ~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~t~--sK~l~~G~~~~G~v~~~~~--~~~~l~~---~~~~------- 320 (439)
T 2oat_A 256 HQVLFIADEIQTGLARTGRWLAVDYENV-RPDIVLL--GKALSGGLYPVSAVLCDDD--IMLTIKP---GEHG------- 320 (439)
T ss_dssp TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEECHH--HHTTSCT---TSSC-------
T ss_pred cCCEEEEeccccCCccCCcchhHHHhCC-CCcEEEe--cccccCCCCCeEEEEECHH--HHhccCC---CCcc-------
Confidence 9999999999976432111111111233 3687754 6999865 56899988753 2222211 0000
Q ss_pred cccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCceEEEEEecCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFALVCFRLNPYP 428 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~ 428 (499)
.+-....+... .+++.+.. ++..++..++++++.+.|+++ ++.++ .++...++.+.+....
T Consensus 321 ----------~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~ 386 (439)
T 2oat_A 321 ----------STYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK 386 (439)
T ss_dssp ----------CSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS
T ss_pred ----------cCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc
Confidence 00011233333 34444322 256778888999999999876 33211 1233456666664320
Q ss_pred CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
. ....++.++|.++|..+ .+ .+..++|+++. ..+|++||++++++|+++.++
T Consensus 387 ---~----~~~~~l~~~l~~~Gv~v-~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 387 ---D----WDAWKVCLRLRDNGLLA-KP---THGDIIRFAPP-LVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ---S----CCHHHHHHHHHHTTEEC-CB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred ---c----HHHHHHHHHHHHCCeEE-ec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHHh
Confidence 0 01346777888888543 33 23467999884 778999999999999988653
No 201
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.78 E-value=8.7e-18 Score=169.93 Aligned_cols=249 Identities=12% Similarity=0.039 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFA 202 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ 202 (499)
..++|+. +++++|.+.. ++ ++|||+||..++.+..+ ++..|+++. ..|....
T Consensus 61 ~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~ 116 (409)
T 3jzl_A 61 RDTLERV----YATVFKTEAA---------LVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLE 116 (409)
T ss_dssp HHHHHHH----HHHHHTCSEE---------EEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHH
T ss_pred HHHHHHH----HHHHhCCCcE---------EEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHH
Confidence 4556654 8999998764 55 89999999888776532 566788887 7787777
Q ss_pred HH----------HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHH
Q 010842 203 KV----------CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPL 268 (499)
Q Consensus 203 ka----------~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I 268 (499)
.. ++..|+ +++.+|.+++ +.+|+++|+++++++ +.+|++.. ++|++|.+.|+++|
T Consensus 117 ~~~~~~g~~~~~l~~~G~---~~~~v~~~~~--g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I 185 (409)
T 3jzl_A 117 EIVGIRKQGQGSLKDFHI---GYSSVPLLEN--GDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEM 185 (409)
T ss_dssp HHHTSSSSSSSCTGGGTC---EEEECCCCTT--SCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHH
T ss_pred HHHhcccchhhHHHHcCC---EEEEeCCCCC--CCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHH
Confidence 53 355678 8999998764 589999999998654 34788888 99999999999999
Q ss_pred HHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcC--Ccc
Q 010842 269 AEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALST--DPE 342 (499)
Q Consensus 269 ~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~--~~~ 342 (499)
+++|++ +|+++|||++|+.+..... .... ++|.++.+.||+++.+. ..|+++.+ ++.. +.+.. ...
T Consensus 186 ~~la~~~~~~~~livD~a~~~~~~~~~---p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li-~~l~~~~~~~ 257 (409)
T 3jzl_A 186 IVFVKNINPEVIVFVDNCYGEFVEYQE---PPEV---GADIIAGSLIKNPGGGLAKTGGYIAGK-EALV-DLCGYRLTTP 257 (409)
T ss_dssp HHHHHHHCTTCEEEEECTTCTTTSSCC---SGGG---TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHH-HHHHHHHSCT
T ss_pred HHHHHhhCCCCEEEEeCCcccccccCC---cccc---CCeEEEECccccCCccCCceEEEEEeC-HHHH-HHHHHHhccc
Confidence 999999 9999999999987642211 1111 38999999999998753 24666664 4333 22211 112
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce----
Q 010842 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA---- 418 (499)
Q Consensus 343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~---- 418 (499)
++... .+..... .|+.++. ......++++..++++++++.|+++ ++++... ...
T Consensus 258 ~~g~~----------------~g~~~~~--~~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~-~~~~~~~ 315 (409)
T 3jzl_A 258 GIGRE----------------AGASLYS--LLEMYQG--FFLAPHVTAQAIKGARFTAAMLAEF-GVEADPV-WDAPRTD 315 (409)
T ss_dssp TTGGG----------------CCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSS
T ss_pred ccccc----------------ccccHHH--HHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCCCcc
Confidence 22110 1111111 2333333 3556778889999999999999998 5677532 223
Q ss_pred -EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 419 -LVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 419 -~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+++|.+.. .+...++++.|...
T Consensus 316 ~i~~i~l~~---------~~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 316 LIQSVSFHN---------KEKMVAFAQAIQAA 338 (409)
T ss_dssp SCCEEECSC---------HHHHHHHHHHHHHT
T ss_pred EEEEEEeCC---------HHHHHHHHHHHHhc
Confidence 66776642 33455666666654
No 202
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.78 E-value=2e-18 Score=173.40 Aligned_cols=298 Identities=14% Similarity=0.052 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---CchhHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---THSTFAKV 204 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~H~s~~ka 204 (499)
..+|+++.+++++++|.++. ...++|+|||+|+..++.+. ++..|+++.. .|+++.+.
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~------~~~~~~~ggt~a~~~~~~~~-------------~gd~Vl~~~~~y~~~~~~~~~ 117 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN------DKCVGFNRTSSAILATILAL-------------KPKKVIHYLPELPGHPSIERS 117 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHHHHH-------------CCSEEEEECSSSSCCTHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCc------ceEEEEcChHHHHHHHHHhC-------------CCCEEEEecCCCCccHHHHHH
Confidence 45677888888999998411 03589999999999888765 2345777777 46666667
Q ss_pred HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE-EEEecCCCccc-ccCChhHHHHHHHHhCCEEEee
Q 010842 205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF-LCATVGTTSTT-AVDNVEPLAEVANEYGIWVHVD 282 (499)
Q Consensus 205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~-vv~t~gtt~~G-~id~l~~I~~ia~~~~~~lhvD 282 (499)
++..|+ +++.+ +|+++|+++ ++ .+.+ |+.+.++|++| ...|+++|+++|++||+++|+|
T Consensus 118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D 178 (374)
T 2aeu_A 118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD 178 (374)
T ss_dssp HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence 888898 88777 278888776 32 2456 77888999999 8999999999999999999999
Q ss_pred ccccchhccCccchh-hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842 283 AAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361 (499)
Q Consensus 283 ~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 361 (499)
++|+.+.. .+.... ... . ..|.++.++||++++| .+|+++.+++ .. +.+.....+.
T Consensus 179 e~~~~~~~-~~~~~~~~~~-~-~~di~~~S~sK~l~g~-~~G~~~~~~~-~~-~~l~~~~~~~----------------- 235 (374)
T 2aeu_A 179 DASGARVR-LLFNQPPALK-L-GADLVVTSTDKLMEGP-RGGLLAGKKE-LV-DKIYIEGTKF----------------- 235 (374)
T ss_dssp CTTHHHHH-HHTTCCCHHH-H-TCSEEEEETTSSSSSC-SCEEEEEEHH-HH-HHHHHHHHTT-----------------
T ss_pred CCcccccc-cccccCCccc-c-CCcEEEecCcccccCc-ceEEEEECHH-HH-HHHHHhhccc-----------------
Confidence 99977631 011010 111 1 3799999999998765 7888877653 22 2221110000
Q ss_pred cCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHH----HHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCC
Q 010842 362 VGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRL----AKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSG 431 (499)
Q Consensus 362 ~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~----a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~ 431 (499)
+.....+.++++ +..+..+.+++..++...+ .+.+.+.|..+ +++.+...+.. .+.+......
T Consensus 236 ---~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g-~~~~~~~~~~--- 308 (374)
T 2aeu_A 236 ---GLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTG-FVIKRVYKDD--- 308 (374)
T ss_dssp ---TCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSE-EEEEEEESSH---
T ss_pred ---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCce-EEEEeecccc---
Confidence 001122333333 3333222334444444444 35556656554 45665444443 3333322110
Q ss_pred cchhH-HHHHHHHHHH-HhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 432 SADTE-MLNRKLLDWV-NSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 432 ~~~~~-~~~~~l~~~l-~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
..+ ....++..++ .+.|+.+..+..+ .+..++|++++....++.+++++.++|+++.+++.+
T Consensus 309 --~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 309 --TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp --HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred --cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 001 0112244333 3567544333222 234579999975555666699999999998887754
No 203
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.78 E-value=1.2e-16 Score=164.64 Aligned_cols=346 Identities=12% Similarity=0.065 Sum_probs=190.5
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+.+...+..... ...........++.++++++++.+.+ .++|+|||+|+..|+.+++...... |
T Consensus 70 v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~~~--------v~~~~ggseA~~~al~~~~~~~~~~----g 135 (452)
T 3n5m_A 70 LAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGEYV--------IFFSNSGSEANETAFKIARQYYAQK----G 135 (452)
T ss_dssp HHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSCEE--------EEEESSHHHHHHHHHHHHHHHHHTT----T
T ss_pred HHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCCce--------EEEeCchHHHHHHHHHHHHHHHHhc----C
Confidence 44444554543222 11223456777788889999876543 4999999999999999988532111 1
Q ss_pred c-CCeEEEcCC-CCchhHHHHHHHhCCC---------CCCeEEeeCCCCCCCc----------cCHHHHHHHHHHHHHcC
Q 010842 186 M-HKLVVYGSD-QTHSTFAKVCKLAGVS---------PANIRALPTSVDANFS----------LSPQLLRRAVEADVEAG 244 (499)
Q Consensus 186 ~-~~~~i~~s~-~~H~s~~ka~~~~G~g---------~~~v~~v~~~~~~~~~----------~d~~~L~~~i~~~~~~g 244 (499)
. ++..|++.+ ..|.....+....|.. ...+..+|....-.+. .++++|+++|++. ..
T Consensus 136 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~ 213 (452)
T 3n5m_A 136 EPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LS 213 (452)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CG
T ss_pred CCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CC
Confidence 1 233444444 4454443333333321 0134455542110011 1189999999731 11
Q ss_pred CccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842 245 LVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319 (499)
Q Consensus 245 ~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 319 (499)
..+.+|++... ++ +|.+-| +++|+++|++||++|++|++|.++......+.....++ ..|.++++ |.++..
T Consensus 214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~~G 289 (452)
T 3n5m_A 214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGITSA 289 (452)
T ss_dssp GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTT
T ss_pred CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--ccccCC
Confidence 23456666666 68 998876 99999999999999999999987532221111112233 26777765 888766
Q ss_pred -CcceEEEEeCchhHHHhhcC---CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842 320 -LDCCCLWVKQPGLLVKALST---DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL 395 (499)
Q Consensus 320 -~~~g~l~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~ 395 (499)
...|+++.+++ +.+.+.. ...++.. .+.....+...+++..+..-.-+++.++..++
T Consensus 290 ~~~ig~~~~~~~--i~~~~~~~~~~~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 350 (452)
T 3n5m_A 290 YLPLSATAVKRE--IYEAFKGKGEYEFFRHI-----------------NTFGGNPAACALALKNLEIIENENLIERSAQM 350 (452)
T ss_dssp SSCCEEEEEEHH--HHGGGCSSSTTCSCCCC-----------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcceEEEEECHH--HHHHHhhccCCCCcccc-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 67888887653 3333322 1111110 11122344444444443211112344555555
Q ss_pred HHHHHHHHh----cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEec
Q 010842 396 AKMFEGFVK----SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAV 469 (499)
Q Consensus 396 a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~ 469 (499)
.+++++.|+ +.|.+..+. +...++.+.+................++.+.+.++|.++..... ..+..++|+++
T Consensus 351 ~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~ 429 (452)
T 3n5m_A 351 GSLLLEQLKEEIGEHPLVGDIR-GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAP 429 (452)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEE-ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECC
T ss_pred HHHHHHHHHHHHhcCCCeEEEE-EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEEC
Confidence 555555554 456554442 33334444442211000000022345678888888965443221 11246899987
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHH
Q 010842 470 GASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 470 ~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
. ...|+++|++++++|+++.++
T Consensus 430 ~-~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 430 P-LVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp C-TTCCHHHHHHHHHHHHHHHTT
T ss_pred C-CCCCHHHHHHHHHHHHHHHHh
Confidence 4 678999999999999987653
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.77 E-value=8.2e-17 Score=164.82 Aligned_cols=318 Identities=13% Similarity=0.042 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHHH
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCKL 207 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~~ 207 (499)
....++.+.+++++|.+.+ ..++|+||++|+..++.+++... ++..|++.. ..|.+...+...
T Consensus 85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~---------~~~~vi~~~~~yhg~~~~~~~~ 148 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT---------GKYEIVGFAQSWHGMTGAAASA 148 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH---------TCCEEEEETTCCCCSSHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCeEEEECCCcCCCChhHHhh
Confidence 4455666778999886543 36999999999999998876421 233344444 456555544443
Q ss_pred hCC------C--CCCeEEeeCCCC--CCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----h
Q 010842 208 AGV------S--PANIRALPTSVD--ANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----V 265 (499)
Q Consensus 208 ~G~------g--~~~v~~v~~~~~--~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l 265 (499)
.+. + ...++.++++.. ..| .+|+++|++++++. ....+.+|+++..++++|.+-+ +
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l 226 (433)
T 1zod_A 149 TYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYM 226 (433)
T ss_dssp CCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHH
T ss_pred cCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHH
Confidence 221 0 114566655321 011 25799999998753 1123445655544567897655 9
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
++|+++|++||+++++|++|+++............++ ..|.++++ |+++.+...|+++.+++ +.+.+... .+..
T Consensus 227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~ig~~~~~~~--~~~~~~~~-~~~~ 300 (433)
T 1zod_A 227 AALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTLS--KTLGAGLPLAAIVTSAA--IEERAHEL-GYLF 300 (433)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--HHHHTTSSCEEEEECHH--HHHHHHHT-TCCC
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEec--ccccCCCCeeEEEEhHH--HHHhhccC-CCCC
Confidence 9999999999999999999986532211111111232 25766654 99887777899988753 22333211 1110
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCce
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFA 418 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~ 418 (499)
. .+-....+...+ +++.+..+ +..++..++++++.+.|++ .|.+..+ ++..+
T Consensus 301 ~-----------------~t~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~ 359 (433)
T 1zod_A 301 Y-----------------TTHVSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGL 359 (433)
T ss_dssp C-----------------CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred C-----------------CCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence 0 000112333333 33333222 3456666777777777765 3544433 33445
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.+.+..... ..........++.+.+.++|..+.....+.+..++|+++ +..+|+++|++++++|+++.+++
T Consensus 360 ~~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~-~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 360 LLGVEIVKDRR-TKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAP-PLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EEEEEEEEETT-TTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcc-ccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHh
Confidence 56665542100 000001124567788888885443333223246799987 47789999999999999987765
No 205
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.77 E-value=4.6e-16 Score=159.99 Aligned_cols=327 Identities=9% Similarity=0.044 Sum_probs=180.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC-chhHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT-HSTFAKV 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~-H~s~~ka 204 (499)
......++.++++++++...+ ..++|+|||+|+..|+.+++...... |. .+..|++.+.+ |.+...+
T Consensus 85 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~----G~~~~~~vi~~~~~yhg~~~~~ 153 (448)
T 3dod_A 85 TNVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI----GKPEKQKFIAMKNGYHGDTIGA 153 (448)
T ss_dssp EEHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEEC----------
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh----CCCCCCEEEEECCCCCCccHHH
Confidence 445667778889999865433 35999999999999999998642211 11 13456555555 4433333
Q ss_pred HHHhCCC---------CCCeEEeeCCCCCCCcc-----------CHHHHHHHHHHHHHcCCccEEEEEecCC-CcccccC
Q 010842 205 CKLAGVS---------PANIRALPTSVDANFSL-----------SPQLLRRAVEADVEAGLVPLFLCATVGT-TSTTAVD 263 (499)
Q Consensus 205 ~~~~G~g---------~~~v~~v~~~~~~~~~~-----------d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G~id 263 (499)
....|.. ...+..+|.+. .|+. |+++|+++|+... ..+.+|++.-.. ++.|.+-
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~ 228 (448)
T 3dod_A 154 VSVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIV 228 (448)
T ss_dssp -------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEE
T ss_pred HHhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeec
Confidence 3322210 01345565542 2343 4899999997321 224456665555 7778775
Q ss_pred C----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhc
Q 010842 264 N----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALS 338 (499)
Q Consensus 264 ~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~ 338 (499)
+ +++|+++|++||++|++|++|.++......+.....++ ..|.++++ |.++..+ ..|+++.+++ +.+.+.
T Consensus 229 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~--~~~~~~ 303 (448)
T 3dod_A 229 MPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED--IYKAFY 303 (448)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH--HHHHhh
Confidence 5 99999999999999999999987533221111112233 26777765 9987763 7888887653 323332
Q ss_pred CC---ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh---cCCCeEEE
Q 010842 339 TD---PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK---SDPRFEIV 412 (499)
Q Consensus 339 ~~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~---~~~~~~~~ 412 (499)
.. ...+. ...+.....+.+.+++..+..-.-+++.++..++.+++++.|+ ..|.+..+
T Consensus 304 ~~~~~~~~~~----------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 367 (448)
T 3dod_A 304 DDYENLKTFF----------------HGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI 367 (448)
T ss_dssp SCGGGCCCCC----------------CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred hccccCCccc----------------ccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 20 00000 0011122344444444443211112344555555555555554 44444332
Q ss_pred cCCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+...++.+.+........ ........++.+.+.++|..+ .+. + .++|+++ +...|+++|++++++|+++.
T Consensus 368 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~-~~~~t~e~i~~~l~~l~~~l 440 (448)
T 3dod_A 368 -RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLT-RPL---G-DVIAFLP-PLASTAEELSEMVAIMKQAI 440 (448)
T ss_dssp -EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEEC-CEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred -EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEE-ecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 2333455666543210000 000011356778888888543 332 2 5799987 47789999999999999999
Q ss_pred HHHhccC
Q 010842 491 DRLFKGS 497 (499)
Q Consensus 491 ~~l~~~~ 497 (499)
+++...+
T Consensus 441 ~~~~~~~ 447 (448)
T 3dod_A 441 HEVTSLE 447 (448)
T ss_dssp HHHHTTC
T ss_pred HHHhccc
Confidence 8876543
No 206
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.77 E-value=3e-17 Score=166.81 Aligned_cols=348 Identities=12% Similarity=0.012 Sum_probs=206.6
Q ss_pred HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC----
Q 010842 70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP---- 145 (499)
Q Consensus 70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~---- 145 (499)
-.+.+.+...-.+...+.....++++-+.+.. .+.+..........|...++..++++++.+|+. |..
T Consensus 29 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v-----~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~---~~~~~~~ 100 (409)
T 4eu1_A 29 LGLGQDFRMDPAKRKVNLSIGVYRDDADQPFV-----LECVKQATLGTNMDYAPVTGIASFVEEAQKLCF---GPTCAAL 100 (409)
T ss_dssp HHHHHHHHHCCCSSCEECCCSSCCCTTSCCCC-----CHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHH---CSSCHHH
T ss_pred HHHHHHHhhCCCcCceeeeeeEEECCCCCEee-----cHHHHhcCccccccCCCCCCcHHHHHHHHHHHc---CCCchhh
Confidence 34555555544444445544444444322221 222333333334566666677889998777763 443
Q ss_pred -CccccCCCccE--EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC
Q 010842 146 -KTFMFSGTGGG--VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV 222 (499)
Q Consensus 146 -~~~~~~~~~~g--~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~ 222 (499)
++ .. ..|.||++|+..+...++.. ..++..|+++.++|.++...++..|. +++.+|++.
T Consensus 101 ~~~-------~i~~~~~~~g~ga~~~~~~~~~~~--------~~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~ 162 (409)
T 4eu1_A 101 RDG-------RIASCQTLGGTGALRIGGDLLNRF--------VANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYD 162 (409)
T ss_dssp HTT-------CEEEEEESHHHHHHHHHHHHGGGT--------SSSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCEE
T ss_pred ccC-------ceeeeecccchHHHHHHHHHHHHh--------cCCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeec
Confidence 22 12 34888998877655443221 01457889999999999999999999 999999853
Q ss_pred CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCc--cchh
Q 010842 223 DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP--EFRH 297 (499)
Q Consensus 223 ~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~ 297 (499)
++++.+|+++|++.+++. .....+++.+.++||||.+-+ +++|+++|++||+++++|.+|+++..... ....
T Consensus 163 ~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 239 (409)
T 4eu1_A 163 PATKGLNLAGMLECLDKA---PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFV 239 (409)
T ss_dssp TTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred CcCCcCcHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHH
Confidence 345799999999999642 112456777889999999966 55699999999999999999987654221 0111
Q ss_pred h--hcCCCCCceeEecccccccCC-CcceEE--EEeCchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842 298 Y--LNGIERVDSFSFSPHKWLLSY-LDCCCL--WVKQPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK 369 (499)
Q Consensus 298 ~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l--~~r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 369 (499)
. ..+...-..++.+..|.++.| ..+|++ ++.++.. +.+.+.....+.. .. ..
T Consensus 240 ~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~-----------------~~---~~ 299 (409)
T 4eu1_A 240 PRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY-----------------NN---PP 299 (409)
T ss_dssp HHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH-----------------SS---CC
T ss_pred HHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc-----------------CC---CC
Confidence 1 112212224566788998755 457886 6666541 1111111000000 00 01
Q ss_pred cHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842 370 SLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEML 438 (499)
Q Consensus 370 al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 438 (499)
.+..+++...+. .+.++++.++..++++++.+.|++.+. +++. +|..+.+.| .+..
T Consensus 300 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~--~~~~---------- 366 (409)
T 4eu1_A 300 LYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAY--TGLT---------- 366 (409)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEE--CCCC----------
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEE--eCCC----------
Confidence 334444443332 234677788888999999999988631 4443 234444444 1211
Q ss_pred HHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 439 NRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 439 ~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.++..++. +.|+ ++.+. .|++++ . .++++|++++++|+++.
T Consensus 367 -~~~~~~ll~~~gv-~v~p~-------~Ri~~~-~-~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 367 -REQVELLRSEYHI-YMTLN-------GRAAVS-G-LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -HHHHHHHHHHHCE-ECCTT-------CEEEGG-G-CCTTTHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCE-EEcCC-------CEEEEE-e-cCHhhHHHHHHHHHHHh
Confidence 12334444 4464 34432 488885 3 45667999999998764
No 207
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.77 E-value=1.3e-16 Score=164.48 Aligned_cols=317 Identities=11% Similarity=-0.028 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~ 205 (499)
.....++.++++++++.+.+ ..++++|||+||..|+.+++...... |. ++..|++ ....|....-+.
T Consensus 117 ~~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~----g~~g~~~ii~~~~~yhg~~~~~~ 185 (457)
T 3tfu_A 117 HEPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR----GLPGKRRLMTWRGGYHGDTFLAM 185 (457)
T ss_dssp CHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCceEEEEcCCcCCccHHhh
Confidence 34455666779999975433 35999999999999999988643221 11 2334444 444454433333
Q ss_pred HHhC-C---------CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccCC----hhHHHH
Q 010842 206 KLAG-V---------SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVDN----VEPLAE 270 (499)
Q Consensus 206 ~~~G-~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id~----l~~I~~ 270 (499)
...+ . ....+..+|....+....|+++|+++|++.. ..+.+|++.. .++++|.+-| +++|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~ 262 (457)
T 3tfu_A 186 SICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRD 262 (457)
T ss_dssp TTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHH
T ss_pred cccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHH
Confidence 2211 0 0114455555433222468999999997532 1345666666 6788898866 999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcC-CccCCCCCC
Q 010842 271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALST-DPEYLKNKP 348 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~-~~~yl~~~~ 348 (499)
+|++||++|++|++|.++......+.....++ ..|.++++ |.++..+ ..|+++.+++ +.+.+.. .+.-+..
T Consensus 263 l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~s--K~l~gG~~~lG~v~~~~~--i~~~~~~~~~~~~~~-- 335 (457)
T 3tfu_A 263 ICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCVG--KALTGGYLSLAATLCTAD--VAHTISAGAAGALMH-- 335 (457)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHHHHHSSSCSCCC--
T ss_pred HHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEEC--hhhhCCCcceEEEEEcHH--HHHHhhccCCCceeE--
Confidence 99999999999999987532211111111233 36878664 8887653 6888888754 2233321 1110000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEec
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLN 425 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~ 425 (499)
..+.....+.+.+++..+..-.-+++.++..++.+++++.|+++ |.+..+ .+...++.+.+.
T Consensus 336 --------------~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~ 400 (457)
T 3tfu_A 336 --------------GPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECD 400 (457)
T ss_dssp --------------CCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEES
T ss_pred --------------ecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEEC
Confidence 01111234444444444321111245666777888888888764 455433 233455666664
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
... + ..++.++|.++|.++ .+ . + .++|+++. ...|++||++++++|+++.+++..
T Consensus 401 ~~~-------~--~~~~~~~l~~~Gv~v-~~--~-~-~~lRi~p~-~~~t~eei~~~l~~L~~~l~~~~~ 455 (457)
T 3tfu_A 401 RPV-------D--LAVATPAALDRGVWL-RP--F-R-NLVYAMPP-YICTPAEITQITSAMVEVARLVGS 455 (457)
T ss_dssp SCC-------C--HHHHHHHHHHTTEEC-CC--B-T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC--
T ss_pred Ccc-------c--HHHHHHHHHHCCeEE-Ee--c-C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHhcc
Confidence 321 1 456778888888543 32 1 2 46999873 667999999999999999887643
No 208
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.77 E-value=3.6e-16 Score=160.88 Aligned_cols=327 Identities=13% Similarity=0.081 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~ 205 (499)
.....++.+.++++++.+.+ ..++|+|||+|+..++.+++..... .|. ++..|++ +...|.+...++
T Consensus 92 ~~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~~----~g~~~~~~vi~~~~~yhg~~~~~~ 160 (449)
T 3a8u_X 92 HPLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWRL----KGQATKTKMIGRARGYHGVNIAGT 160 (449)
T ss_dssp CHHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHH----TTCTTCCEEEEETTCCCCSSHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHHh----cCCCCCCEEEEECCCcCCCChhhh
Confidence 33445566678888865433 3599999999999999888753211 011 2334444 555566666666
Q ss_pred HHhCC-------C--CCCeEEeeCCCC--CCC-ccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842 206 KLAGV-------S--PANIRALPTSVD--ANF-SLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN- 264 (499)
Q Consensus 206 ~~~G~-------g--~~~v~~v~~~~~--~~~-~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~- 264 (499)
...|. + ...+..++++.. .+| .+| +++|+++|++.. ...+.+|+++..++++|.+-|
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~ 238 (449)
T 3a8u_X 161 SLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPP 238 (449)
T ss_dssp HHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCC
T ss_pred hccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCC
Confidence 65542 1 014566665421 000 256 999999997531 012446666655567998888
Q ss_pred ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
+++|.++|++||+++++|++|.++......+.....++ ..|.+++ .|+++.. ...|++++++ +.. +.+...
T Consensus 239 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~~~~~-~~~-~~l~~~ 313 (449)
T 3a8u_X 239 EGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAVIAST-EIY-QTFMNQ 313 (449)
T ss_dssp TTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HHH-HHHHTC
T ss_pred HHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCceEEEEECH-HHH-HHhhcc
Confidence 99999999999999999999965432211111111232 2677755 4998753 3488888875 322 333221
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCce
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFA 418 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~ 418 (499)
... ... . .+ ....+.....+.+.+++..+..-.-+++.++..++.+++.+.|++++++.++ .++..+
T Consensus 314 ~~~--~~~----~--~~---~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~ 382 (449)
T 3a8u_X 314 PTP--EYA----V--EF---PHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGL 382 (449)
T ss_dssp SSC--TTS----C--SS---CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT
T ss_pred Ccc--ccc----c--cc---cccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEE
Confidence 000 000 0 00 0001111223433333333311001246777888888999888774332211 123445
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
++.+.+.... ..... ...++.+.|.++|+.+ .+. + .++|+++. ..+|++|+++++++|+++.+++
T Consensus 383 ~~~i~~~~~~--~~~~~--~~~~~~~~l~~~Gv~v-~~~---g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 383 AGAIQIAPRD--GDAIV--RPFEAGMALWKAGFYV-RFG---G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEEEEECCBT--TBSSH--HHHHHHHHHHHHTEEC-EEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCc--ccccc--cHHHHHHHHHHCCcEE-ecC---C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHHH
Confidence 6777665321 00000 1224777777778543 332 3 67999974 6789999999999999987764
No 209
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.76 E-value=7e-16 Score=159.54 Aligned_cols=323 Identities=11% Similarity=0.044 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~ 205 (499)
.....++.+.++++++.+.+ ..++++|||+||..|+.+++...... |. ++..|++ ....|....-+.
T Consensus 98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~----g~~~~~~ii~~~~~yHg~t~~~~ 166 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK----GQPEKTVIISRKNAYHGSTVASS 166 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc----CCCCCCEEEEEcCcCCCccHHhh
Confidence 44555666778888865433 35999999999999999998743211 21 2333444 444455444333
Q ss_pred HHhCC--------CCCCeEEeeCCC--C-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 206 KLAGV--------SPANIRALPTSV--D-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 206 ~~~G~--------g~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
...|. ....+..+|... . +++ +| +++|++.|++.. ...+.+|++.-.+++.|.+-|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~ 243 (472)
T 3hmu_A 167 ALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPD 243 (472)
T ss_dssp HHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCT
T ss_pred hccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCH
Confidence 33221 111455666432 0 111 34 788888886421 123456777667777888877
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+++|.++|++||++|++|++|.++......+.....++ ..|.++++ |.++.. ...|+++.+++ +.+.+..
T Consensus 244 ~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~--i~~~~~~-- 316 (472)
T 3hmu_A 244 SYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE--VAHVIGK-- 316 (472)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHTT--
T ss_pred HHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH--HHHhccc--
Confidence 99999999999999999999987643222111112243 36888876 988765 46788887653 3234421
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhc---CCCeEEEcCCCc
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI-RLAKMFEGFVKS---DPRFEIVVPRHF 417 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~---~~~~~~~~~~~~ 417 (499)
..+.. ..+.....+...+++..+..-.-+++.++.. ++.+++++.|++ .|.+..+ .+..
T Consensus 317 ~~~~~----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G 379 (472)
T 3hmu_A 317 DEFNH----------------GYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVG 379 (472)
T ss_dssp SCBCC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEET
T ss_pred CCccc----------------cCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecC
Confidence 11111 0111223455455444442111134556666 666777776654 3444433 2344
Q ss_pred eEEEEEecCCCCC-Cc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 418 ALVCFRLNPYPHS-GS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 418 ~~v~f~~~~~~~~-~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.++.+.+...... .. .........+.+.|.++|.++... + .++|+++ ....|++||++++++|+++.+++.
T Consensus 380 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 380 MMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV----G-DRMIISP-PLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5566666432100 00 000233567888888889654432 2 6799997 367899999999999998876653
No 210
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.76 E-value=6.5e-16 Score=159.07 Aligned_cols=325 Identities=13% Similarity=0.050 Sum_probs=179.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc-CCCCchhHHHH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG-SDQTHSTFAKV 204 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~-s~~~H~s~~ka 204 (499)
.......++.++++++++.+.. ...+||+|||+||..|+.+++... ++..|++ ....|....-+
T Consensus 104 ~~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~---------g~~~ii~~~~~yhg~~~~~ 168 (453)
T 4ffc_A 104 TPYEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT---------GRPAVVAFDNAYHGRTNLT 168 (453)
T ss_dssp SCCHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc---------CCCEEEEEcCccCCcchHH
Confidence 3456667777889999874321 135999999999999999887532 2333444 44446554444
Q ss_pred HHHhCCC----------CCCeEEeeCCCC--CCCccC-HHHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----h
Q 010842 205 CKLAGVS----------PANIRALPTSVD--ANFSLS-PQLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----V 265 (499)
Q Consensus 205 ~~~~G~g----------~~~v~~v~~~~~--~~~~~d-~~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l 265 (499)
....|.. ...+..+|.... +.+.++ .+.++..++.-.+ ....+.+|++.-.++..|.+-| +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l 248 (453)
T 4ffc_A 169 MALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFL 248 (453)
T ss_dssp HHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred HhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHH
Confidence 4443321 114666665421 111233 2333332222111 1123444555444444566655 9
Q ss_pred hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842 266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK 345 (499)
Q Consensus 266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~ 345 (499)
++|.++|++||++|++|++|.++......+.....++ ..|.++++ |.++.....|+++.+++ +.+.+... .
T Consensus 249 ~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~--i~~~~~~~---~- 319 (453)
T 4ffc_A 249 ATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE--LMDAVYAG---G- 319 (453)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH--HHTTSCTT---S-
T ss_pred HHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH--HHhhhccc---C-
Confidence 9999999999999999999987533221111112233 36777765 99877677888877543 22222110 0
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEEE
Q 010842 346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALVC 421 (499)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~ 421 (499)
. ..+.....+...+++..+..-.-+++.++..++.+++++.| .+.|.+..+ .+...++.
T Consensus 320 ~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~ 382 (453)
T 4ffc_A 320 L----------------GGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAMLA 382 (453)
T ss_dssp S----------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTEEE
T ss_pred c----------------CCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceEEE
Confidence 0 01111234444444444321111234444455555555544 445655443 23344566
Q ss_pred EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
+.+.... ..........++.+.+.++|.++.....+ ..++|+++ +...|+++|++++++|+++.+++.+.
T Consensus 383 ~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 383 IEIVKPG--TLEPDAALTKSIAAEALSQGVLILTCGTF--GNVIRLLP-PLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp EEEBCTT--SCCBCHHHHHHHHHHHHHTTEECCEECTT--SCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEecCc--ccCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6554311 00111344677888888899554333221 25699988 37789999999999999999887643
No 211
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.76 E-value=3.8e-16 Score=161.14 Aligned_cols=325 Identities=11% Similarity=0.026 Sum_probs=185.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC-chhHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT-HSTFAKV 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~-H~s~~ka 204 (499)
......++.++++++++.+.+ ..++++|||+|+..++.+++...... |. ++..|++...+ |....-+
T Consensus 92 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~ 160 (459)
T 4a6r_A 92 THPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ----GKPEKKTLIGRWNGYHGSTIGG 160 (459)
T ss_dssp CCHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCccHHH
Confidence 456667788889999876443 35999999999999999998643211 21 23445444444 5444333
Q ss_pred HHHhCCC---------CCCeEEeeCCC--C-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 205 CKLAGVS---------PANIRALPTSV--D-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 205 ~~~~G~g---------~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
....|.. ...+..++... . +++ +| +++|+++|++.. ...+.+|++...+++.|.+-+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~ 237 (459)
T 4a6r_A 161 ASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVP 237 (459)
T ss_dssp HHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCC
T ss_pred HhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccC
Confidence 3333321 11445555332 0 112 45 788988886521 123456666666667788777
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
+++|.++|++||+++++|++|.++......+.....++ ..|.++++ |.++.. ...|+++.+++ +.+.+..
T Consensus 238 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~~--i~~~~~~ 312 (459)
T 4a6r_A 238 PATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGKR--VAEGLIA 312 (459)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECHH--HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCHH--HHHHhhc
Confidence 99999999999999999999987533221111112233 36888875 988765 46788877543 2222221
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH-HHHHHHH----HHHhcCCCeEEEcC
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI-RLAKMFE----GFVKSDPRFEIVVP 414 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~----~~L~~~~~~~~~~~ 414 (499)
...+... .+.....+...+++..+..-.-++++++.. ++.++++ +.|.+.|.+..+ .
T Consensus 313 ~~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~ 374 (459)
T 4a6r_A 313 GGDFNHG-----------------FTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-R 374 (459)
T ss_dssp HCTTHHH-----------------HHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-E
T ss_pred CCCcccC-----------------CCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-E
Confidence 0000000 001112344444444432100123344444 4444444 444556655544 3
Q ss_pred CCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 415 RHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 415 ~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+...++.+.+........ ........++.+.+.++|.++... + .++|+++ +...|++++++++++|+++.++
T Consensus 375 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 375 GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAP-PLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 344556666543210000 001233567788888888554332 2 6799997 3678999999999999998877
Q ss_pred Hh
Q 010842 493 LF 494 (499)
Q Consensus 493 l~ 494 (499)
+.
T Consensus 449 ~~ 450 (459)
T 4a6r_A 449 FE 450 (459)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 212
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=4e-17 Score=165.68 Aligned_cols=251 Identities=10% Similarity=0.048 Sum_probs=167.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhH
Q 010842 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTF 201 (499)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~ 201 (499)
...++|+. +++++|.+.. ++ ++|||+||..++.+..+ ++..|+++. ..|...
T Consensus 75 g~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~ 130 (427)
T 3hvy_A 75 GRDSLDRV----YANIFNTESA---------FVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTL 130 (427)
T ss_dssp HHHHHHHH----HHHHHTCSEE---------EEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGG
T ss_pred hHHHHHHH----HHHHhCCCce---------EEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhH
Confidence 34556654 8999998764 66 89999999887776532 567788887 777655
Q ss_pred H-----------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChh
Q 010842 202 A-----------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVE 266 (499)
Q Consensus 202 ~-----------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~ 266 (499)
. ..++..|+ +++.||. ++ +.+|+++|++++++. .++.+|+++. ++|++|.+.|++
T Consensus 131 ~~~~g~~~~~~~~~l~~~G~---~~~~v~~-~~--~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~ 200 (427)
T 3hvy_A 131 HDIIGMDDSKKVGSLREYGV---KYKMVDL-KD--GKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIA 200 (427)
T ss_dssp HHHHTCCTTCCSCCTGGGTC---EEEECCC-BT--TBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHH
T ss_pred HHHhccccchhhhHHHHcCC---EEEEecC-CC--CCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHH
Confidence 4 33455688 8888887 33 589999999999731 1245788888 899999999999
Q ss_pred HHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHHHhhcC--C
Q 010842 267 PLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLVKALST--D 340 (499)
Q Consensus 267 ~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~~~~~~--~ 340 (499)
+|+++|++ +|++++||+||+.+..... .... ++|.++.+.||+++.+ ...|+++.+ ++.. +.+.. .
T Consensus 201 ~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li-~~l~~~~~ 272 (427)
T 3hvy_A 201 EIIKSIREVNENVIVFVDNCYGEFVEEKE---PTDV---GADIIAGSLIKNIGGGIATTGGYIAGK-EEYV-TQATFRVT 272 (427)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCTTTSSSC---GGGG---TCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHS
T ss_pred HHHHHHHHhCCCCEEEEECCccccccCCC---Cccc---CCeEEEECCcccccccccceEEEEEEC-HHHH-HHHHHHhh
Confidence 99999999 8999999999987652211 1111 3899999999999873 234777665 3332 22211 1
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce--
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-- 418 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-- 418 (499)
...+. ...+-.+.. .|+.++. ......++++..+++.++++.|+++ ++++... ...
T Consensus 273 ~~~~g----------------~~~~~~~~~--a~~~~~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~ 330 (427)
T 3hvy_A 273 VPGIG----------------GECGSTFGV--MRSLYEG--LFMAPHVTIEAVKGAVFCARIMELA-GFDVLPK-YNDKR 330 (427)
T ss_dssp CTTTG----------------GGCCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCC
T ss_pred cCCcc----------------cccCCCHHH--HHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCC
Confidence 11111 011111111 3444433 3555678889999999999999998 5677533 223
Q ss_pred ---EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 419 ---LVCFRLNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 419 ---~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+++|.+.. .+...++++.|...
T Consensus 331 ~~li~~~~l~~---------~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 331 TDIIQAIKFND---------EKKLIDFIKGIQTA 355 (427)
T ss_dssp SSSEEEEECSS---------HHHHHHHHHHHHHT
T ss_pred ceEEEEEeCCC---------HHHHHHHHHHhccc
Confidence 67777743 23455666666553
No 213
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.75 E-value=1e-15 Score=158.00 Aligned_cols=330 Identities=12% Similarity=0.024 Sum_probs=188.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcC-CCCchhHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGS-DQTHSTFAKV 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s-~~~H~s~~ka 204 (499)
......++.++++++++.+.+ ..++|+|||+||..|+.+++...... |. ++..|++. ...|....-+
T Consensus 93 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~ 161 (460)
T 3gju_A 93 GTEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNVL----GRPEKKKIISRWRGYHGSGVMT 161 (460)
T ss_dssp CCHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred CCHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCCCHHH
Confidence 345666777889998765433 35999999999999999988643211 21 23445444 4445554444
Q ss_pred HHHhCC---------CCCCeEEeeCCCC---CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 205 CKLAGV---------SPANIRALPTSVD---ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 205 ~~~~G~---------g~~~v~~v~~~~~---~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
....|. ....+..+|.... +++.++ +++|+++|++.. ...+.+|++...++++|.+-+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~ 239 (460)
T 3gju_A 162 GSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPP 239 (460)
T ss_dssp HHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCC
T ss_pred hhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccC
Confidence 443322 1114566664320 111233 688988887421 123456777777777787655
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST 339 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~ 339 (499)
+++|+++|++||++|++|.+|.++......+.....++ ..|.++++ |.++.. ...|+++.+++ +.+.+..
T Consensus 240 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~--i~~~~~~ 314 (460)
T 3gju_A 240 PAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR--VWQVLVQ 314 (460)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH--HHHHHhc
Confidence 99999999999999999999987633221111112233 36778775 998765 46788887654 2233311
Q ss_pred C---ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842 340 D---PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIV 412 (499)
Q Consensus 340 ~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 412 (499)
. ...+... .+.....+...+++..+ ..+. +++..+....+.+.+.+.+.+.|.+..+
T Consensus 315 ~~~~~~~~~~~----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 378 (460)
T 3gju_A 315 GSDKLGSLGHG----------------WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV 378 (460)
T ss_dssp HHHHHCSCSCC----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred ccccccccccC----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 0 0001100 11112234444444443 2232 2223333333444555555666665544
Q ss_pred cCCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 413 VPRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 413 ~~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
.+...++.+.+........ ........++.+.+.++|.++.... +..++|+++. ...|+++|++++++|+++.
T Consensus 379 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l 453 (460)
T 3gju_A 379 -RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPP-LCLTREQADIVVSKTADAV 453 (460)
T ss_dssp -EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred -eeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence 3334556666543210000 0011235677888888896443322 3467999973 6789999999999999998
Q ss_pred HHHhc
Q 010842 491 DRLFK 495 (499)
Q Consensus 491 ~~l~~ 495 (499)
+++.+
T Consensus 454 ~~~~~ 458 (460)
T 3gju_A 454 KSVFA 458 (460)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 87654
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.75 E-value=9.2e-16 Score=157.87 Aligned_cols=338 Identities=12% Similarity=0.071 Sum_probs=186.5
Q ss_pred HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842 106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185 (499)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g 185 (499)
+.+.+...+... ..+.......+...++.++++++++.+.. ...+||+|||+||..|+.+++...
T Consensus 82 v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~-------- 146 (451)
T 3oks_A 82 VVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT-------- 146 (451)
T ss_dssp HHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc--------
Confidence 344444444432 12222223455666778889999874321 135999999999999999988642
Q ss_pred cCCeEEEc-CCCCchhHHHHHHHhCCC----------CCCeEEeeCCCC------C--CCc---cCHHHHHHHHHHHHHc
Q 010842 186 MHKLVVYG-SDQTHSTFAKVCKLAGVS----------PANIRALPTSVD------A--NFS---LSPQLLRRAVEADVEA 243 (499)
Q Consensus 186 ~~~~~i~~-s~~~H~s~~ka~~~~G~g----------~~~v~~v~~~~~------~--~~~---~d~~~L~~~i~~~~~~ 243 (499)
++..|++ ....|....-+....|-. ...+..+|.... + ... -+++.+++.|++.. .
T Consensus 147 -g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~ 224 (451)
T 3oks_A 147 -HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-G 224 (451)
T ss_dssp -CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-C
T ss_pred -CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-C
Confidence 2334444 444454444444332210 114667766410 0 001 13455555555321 1
Q ss_pred CCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842 244 GLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319 (499)
Q Consensus 244 g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 319 (499)
...+.+|++.-.+++.|.+-| +++|.++|++||+++++|++|.++......+.....++ ..|.++++ |.++..
T Consensus 225 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G 301 (451)
T 3oks_A 225 ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVTA--KGIAGG 301 (451)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTT
T ss_pred CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeeeh--hhhhCC
Confidence 223445555555555666655 99999999999999999999987533221111112233 36777665 999877
Q ss_pred CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842 320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 320 ~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l 399 (499)
...|+++.+++ +.+.+... . ...+.....+...+++..+..-.-+++.++..++.+++
T Consensus 302 ~~iG~v~~~~~--~~~~~~~~---~-----------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l 359 (451)
T 3oks_A 302 LPLSAVTGRAE--IMDSPHVS---G-----------------LGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIM 359 (451)
T ss_dssp SSCEEEEEEHH--HHTCSCTT---S-----------------BCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cceEEEEECHH--HHhhhcCC---C-----------------cCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 77888877543 22222110 0 00111223455555544442111123445555555555
Q ss_pred HHHHh----cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842 400 EGFVK----SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475 (499)
Q Consensus 400 ~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t 475 (499)
++.|+ +.|.+..+ .+...++.+.+.... ..........++.+.+.++|.++.....+ ..++|+++ +...|
T Consensus 360 ~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~-~~~~t 433 (451)
T 3oks_A 360 KDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAG--TTEPDADLTKALCAGAHAAGVIVLSCGTY--GNVVRFLP-PLSIG 433 (451)
T ss_dssp HHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTT--SCCBCHHHHHHHHHHHHHTTEECEEECTT--SCEEEECC-CTTCC
T ss_pred HHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCc--cCCCCHHHHHHHHHHHHhCCcEEecCCCC--CCEEEEEC-CCCCC
Confidence 55554 45655443 233445666654311 00011344667888888999654443221 24699987 37789
Q ss_pred HHHHHHHHHHHHHHHH
Q 010842 476 ERHVVAAWELIMEGAD 491 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~ 491 (499)
+++|++++++|.++.+
T Consensus 434 ~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 434 DDLLNEGLDVLEEVLR 449 (451)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 215
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.75 E-value=1.6e-16 Score=162.51 Aligned_cols=310 Identities=12% Similarity=0.022 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
...++.+.++++++-++ ..++++|||+||..++.+++... + ++.+|......|.+...++...|
T Consensus 94 ~~~~l~~~la~~~~~~~--------~v~~~~~Gsea~~~ai~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~~~g 157 (429)
T 3k28_A 94 IENKLAKLVIERVPSIE--------IVRMVNSGTEATMSALRLARGYT-------G-RNKILKFIGCYHGHGDSLLIKAG 157 (429)
T ss_dssp HHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------T-CCEEEEEETCCCCSCGGGCSSCC
T ss_pred HHHHHHHHHHHhCCCCC--------EEEEeCChHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCcHHHHHhcC
Confidence 33444455888875222 35999999999999999887542 0 23344444445544443333333
Q ss_pred CCCCCeEEeeCCCCCCCc------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHH
Q 010842 210 VSPANIRALPTSVDANFS------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVAN 273 (499)
Q Consensus 210 ~g~~~v~~v~~~~~~~~~------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~ 273 (499)
. .+..++......+. -|+++|++++++.. ..+.+|++...++++|.+.| +++|.++|+
T Consensus 158 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 231 (429)
T 3k28_A 158 S---GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTE 231 (429)
T ss_dssp T---TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHH
T ss_pred C---cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHH
Confidence 3 22222111111010 18999999987532 12456777766777888888 999999999
Q ss_pred HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842 274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 353 (499)
+||+++|+|++|.++ ...........++ ..|.++++ |.++.+..+|+++.+++ +.+.+.......
T Consensus 232 ~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~~~--~~~~~~~~~~~~--------- 296 (429)
T 3k28_A 232 QNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCLG--KVIGGGLPVGAYGGKAE--IMRQVAPSGPIY--------- 296 (429)
T ss_dssp HHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEEC--GGGGTTSCCEEEEECHH--HHTTBTTTSSBC---------
T ss_pred HcCCEEEEecccccc-ccCcchHHHHhCC-CCceehhh--hhhcCCCCeEEEEEcHH--HHhhhccCCCcc---------
Confidence 999999999999775 3221111112233 26777764 98877777898877542 222222110000
Q ss_pred cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCC
Q 010842 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPH 429 (499)
Q Consensus 354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~ 429 (499)
...+.....+.+.+++..+.... ++..++..++++++.+.|+++ +.+..+ ++....+.+.+.....
T Consensus 297 --------~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 366 (429)
T 3k28_A 297 --------QAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEPV 366 (429)
T ss_dssp --------CCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSCC
T ss_pred --------ccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCCc
Confidence 01111223455555554442111 566777777777777777653 332222 2334455665532210
Q ss_pred CC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 430 SG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 430 ~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
.. .........++.+.+.++|..+ .+. +...+|+++ .+|++|+++++++|+++.+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~r~~~---~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 367 INYDAAKSSNLQFFAAYYREMVEQGVFL-PPS---QFEGLFLST---VHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp CSHHHHTTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCBCCCT---TCCHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccccHHHHHHHHHHHHHCCeEE-ecC---CCCCEEEEC---CCCHHHHHHHHHHHHHHHHHH
Confidence 00 0001234567788888888543 332 224577754 479999999999999987654
No 216
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.75 E-value=1.1e-15 Score=158.17 Aligned_cols=330 Identities=12% Similarity=0.021 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKV 204 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka 204 (499)
......++.+|++++++.+.+ ..++++|||+||..|+.+++...... |. ++..|++ ....|....-+
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~----g~~~~~~vi~~~~~yHg~~~~~ 163 (476)
T 3i5t_A 95 ATSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL----GRPQKKRIIVRYDGYHGSTALT 163 (476)
T ss_dssp BCHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred CCHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEEcCCcCcCChhh
Confidence 456777788889999865433 35999999999999999998653221 21 2333444 44446555444
Q ss_pred HHHhCCC---------CCCeEEeeCCCC-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 205 CKLAGVS---------PANIRALPTSVD-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 205 ~~~~G~g---------~~~v~~v~~~~~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
....|.. ...+..++.... ..+..| +++|+++|++.. ...+.+|++....++.|.+-+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~ 241 (476)
T 3i5t_A 164 AACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPA 241 (476)
T ss_dssp HHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCT
T ss_pred ccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCH
Confidence 4433320 123445553210 001223 789999887421 123456777777777887655
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~ 340 (499)
|++|.++|++||++|++|++|.++......+... ..++ ..|.++++ |.++.. ...|+++.+++ +.+.+...
T Consensus 242 ~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~~--i~~~~~~~ 316 (476)
T 3i5t_A 242 GYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISEA--VLARISGE 316 (476)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECHH--HHHTTSGG
T ss_pred HHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECHH--HHHHHhcC
Confidence 9999999999999999999998763322211111 2333 36888875 988766 56788887543 32333221
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCc
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHF 417 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~ 417 (499)
.... ..+....+.....+.+.+++..+..-.-+++.++..++.+++++.|+++ |.+..+ .+..
T Consensus 317 ~~~~-------------~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G 382 (476)
T 3i5t_A 317 NAKG-------------SWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET-RSVG 382 (476)
T ss_dssp GCTT-------------CEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEET
T ss_pred Cccc-------------ccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecC
Confidence 0000 0000011112234555555444421111356677777888888877754 444433 2334
Q ss_pred eEEEEEecCCCCCCcch---hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 418 ALVCFRLNPYPHSGSAD---TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~---~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.++.+.+.... .+... .......+.+.+.++|.++. +. | .++|+++. ...|+++|++++++|+++.+++.
T Consensus 383 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~---g-~~iRi~p~-l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 383 LVGCVQCLLDP-TRADGTAEDKAFTLKIDERCFELGLIVR-PL---G-DLCVISPP-LIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp TEEEEEECCC------CCHHHHHHHHHHHHHHHHTTEECE-EE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEecCc-cccccccchhHHHHHHHHHHHHCCCEEE-ec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 45566654321 00000 11245678888888885443 32 3 67999973 66899999999999999988765
Q ss_pred c
Q 010842 495 K 495 (499)
Q Consensus 495 ~ 495 (499)
+
T Consensus 456 ~ 456 (476)
T 3i5t_A 456 A 456 (476)
T ss_dssp H
T ss_pred H
Confidence 4
No 217
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.74 E-value=3.9e-16 Score=160.59 Aligned_cols=317 Identities=12% Similarity=0.022 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH---hhhhccCCeEEEcCCCC-chhHH
Q 010842 128 TELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA---VGAENMHKLVVYGSDQT-HSTFA 202 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~---~~~~g~~~~~i~~s~~~-H~s~~ 202 (499)
.....++.+.++++++ .+.+ ..++++|||+||..|+.+++.....+ .+..+.++..|++.+.+ |....
T Consensus 100 ~~~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~ 172 (449)
T 2cjg_A 100 SVAMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSG 172 (449)
T ss_dssp CHHHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSST
T ss_pred CHHHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCccc
Confidence 3344555566888876 2222 35999999999999999887432200 00001114456666554 43322
Q ss_pred HHHHH--------hCCCC--CCeEEeeCCCCCCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 203 KVCKL--------AGVSP--ANIRALPTSVDANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 203 ka~~~--------~G~g~--~~v~~v~~~~~~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
-+... .|.+. ..++.+|.+..+.. ..++++|+++|++. +..+.+|+++..++++|.+-+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~ 249 (449)
T 2cjg_A 173 YTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHF 249 (449)
T ss_dssp TGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEEC
T ss_pred chhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccC
Confidence 22111 12211 25667776531001 25677788888642 123456666666678897766
Q ss_pred ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842 265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD 340 (499)
Q Consensus 265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~ 340 (499)
+++|+++|++||+++++|++|+++......+.....++ ..|.++++ |++ | .|+++.+++ .. +.+.
T Consensus 250 ~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~~-~~-~~l~-- 318 (449)
T 2cjg_A 250 RPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGRR-VD-EVAD-- 318 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECGG-GG-GSTT--
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECHH-Hh-hhhh--
Confidence 99999999999999999999986533211111111233 36877765 988 4 788887653 22 1110
Q ss_pred ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCC
Q 010842 341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPR 415 (499)
Q Consensus 341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~ 415 (499)
+.++.... ...+-....+...+++..+..-.-+++.++..++++++.+.|++ .|. +..+ ++
T Consensus 319 ~~~~~~~~-------------~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~ 384 (449)
T 2cjg_A 319 NVFAVPSR-------------LNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP-RG 384 (449)
T ss_dssp CTTTSTTS-------------SCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EE
T ss_pred hcccCCcc-------------cccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ee
Confidence 00110000 00011112344444433332100134567777888888888875 454 5433 33
Q ss_pred CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...++.+.+.. .....++.++|.++|.++... +..++|+++ +..+|++||++++++|+++.+++
T Consensus 385 ~g~~~~~~~~~---------~~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 385 RGLMCAFSLPT---------TADRDELIRQLWQRAVIVLPA----GADTVRFRP-PLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ETTEEEEECSS---------HHHHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEECC---------hHHHHHHHHHHHHCCeEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 44566666543 122456888888888544332 346799988 47789999999999999987764
No 218
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=3.5e-16 Score=160.14 Aligned_cols=308 Identities=12% Similarity=0.029 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHHHh
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCKLA 208 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~~~ 208 (499)
...++.+++++.++-++ ..++++|||+|+..++.+++... ++..|++...+ |.....+....
T Consensus 96 ~~~~l~~~la~~~~~~~--------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~ 158 (434)
T 3l44_A 96 LEVKFAKMLKEAMPALD--------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVAA 158 (434)
T ss_dssp HHHHHHHHHHHHCTTCS--------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC-
T ss_pred HHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhhc
Confidence 34445566888886222 35999999999999999887642 33345544444 44333332222
Q ss_pred CCCCC----------------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842 209 GVSPA----------------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL 268 (499)
Q Consensus 209 G~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I 268 (499)
|.+.. .+..+|. -|+++|++++++.. ..+.+|++...++++|.+.| +++|
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l 228 (434)
T 3l44_A 159 GSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKV 228 (434)
T ss_dssp ------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHH
Confidence 22100 1222221 18999999997632 12446666666677888887 9999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
.++|++||++||+|++|.++ ...........++ ..|.++++ |.++.+...|+++.+++ .. +.+.......
T Consensus 229 ~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~~~-i~-~~~~~~~~~~---- 298 (434)
T 3l44_A 229 NELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAYGGKKE-IM-EQVAPLGPAY---- 298 (434)
T ss_dssp HHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECHH-HH-TTBTTTSSBC----
T ss_pred HHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeEEEcHH-HH-HhhccCCCcc----
Confidence 99999999999999999876 3221111112233 26777664 88887788999876542 22 2222110000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL 424 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~ 424 (499)
...+.....+.+.+++..+..-.-+++.++..++.+++++.|++ .+.+..+ ++..+++.+.+
T Consensus 299 -------------~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~ 364 (434)
T 3l44_A 299 -------------QAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYF 364 (434)
T ss_dssp -------------CCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEE
T ss_pred -------------cCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEE
Confidence 00111223444444444332100034555666666666666654 3332222 33445666665
Q ss_pred cCCCCCCcc----hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842 425 NPYPHSGSA----DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK 495 (499)
Q Consensus 425 ~~~~~~~~~----~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~ 495 (499)
......+.. .......++.+.|.++|..+ .+. +...+|+++ ..|++|+++++++|+++.+++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~rl~~---~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 365 TTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNL-APS---KYEAWFLTT---EHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp SSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEEC-CSS---TTCCEECCT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccchhhccccCHHHHHHHHHHHHHCCeEE-eec---CCCcEEEec---ccCHHHHHHHHHHHHHHHHHHHh
Confidence 332100000 01223466788888888543 322 223578754 47999999999999999887654
No 219
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.72 E-value=2.9e-15 Score=154.30 Aligned_cols=329 Identities=12% Similarity=0.012 Sum_probs=182.1
Q ss_pred HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184 (499)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~ 184 (499)
.+.+.+...+... ..+ ....+++.++.+|++++++ ..+ ..++++|||+|+..++.+||...
T Consensus 77 ~v~~a~~~~~~~~-~~~---~~~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~------- 137 (453)
T 2cy8_A 77 RVNAAIAEALSHG-VQY---AASHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT------- 137 (453)
T ss_dssp HHHHHHHHHHTTT-CSS---CSSCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHhC-CCC---CCCCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------
Confidence 3445555555432 122 2356789999999999986 322 35899999999999999876432
Q ss_pred ccCCeEEEcCCCCch-hHHHHHHH----------hCCCC---CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE
Q 010842 185 NMHKLVVYGSDQTHS-TFAKVCKL----------AGVSP---ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL 250 (499)
Q Consensus 185 g~~~~~i~~s~~~H~-s~~ka~~~----------~G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v 250 (499)
++..|++.+.+++ ....+... .|+.. ..+..+|. .|+++|+++|++.. ..+.+|
T Consensus 138 --~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~v 205 (453)
T 2cy8_A 138 --GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAF 205 (453)
T ss_dssp --CCCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEE
T ss_pred --CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEE
Confidence 2223444444433 22222111 12200 02333332 38999999997531 124466
Q ss_pred EEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842 251 CATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW 326 (499)
Q Consensus 251 v~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 326 (499)
+++...+++|.+-| +++|.++|++||+++++|++|+++ ...+.......++ ..|.+++ .|+++.+..+|+++
T Consensus 206 i~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~ 281 (453)
T 2cy8_A 206 IAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTCL--AKASAGGLPGGILG 281 (453)
T ss_dssp EECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEE
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEEE--ChhhhCCcceEEEe
Confidence 66655567898877 999999999999999999999865 3221111111232 2676654 59998767799998
Q ss_pred EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhc
Q 010842 327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
.+++ +.+.+.... ... . ....+.....+...+++..+.. - .+++.++..++++++.+.|++
T Consensus 282 ~~~~--~~~~l~~~~----~~~--------~---~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 282 GRED--VMGVLSRGS----DRK--------V---LHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNH 343 (453)
T ss_dssp ECHH--HHTTSSSCC------------------------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHH
T ss_pred chHH--HHHHhcccc----CCC--------c---eeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHH
Confidence 8752 222222100 000 0 0000111223444444333321 1 234566777777888877765
Q ss_pred C----CCeEEEcCCCceEEEEEecC-----CC----CCC-cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842 406 D----PRFEIVVPRHFALVCFRLNP-----YP----HSG-SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA 471 (499)
Q Consensus 406 ~----~~~~~~~~~~~~~v~f~~~~-----~~----~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~ 471 (499)
+ +-...+ ++...++.+.+.. .. ..+ .........++.+.|.++|..+ .+ .+. +|++
T Consensus 344 ~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v-~~---~~~--~~l~--- 413 (453)
T 2cy8_A 344 LFARKGLNWLA-YGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDI-GG---RGS--VFLS--- 413 (453)
T ss_dssp HHHHTTCCEEE-ECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEEC-BT---TTE--EECC---
T ss_pred HHhhCCCcEEE-EEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEE-eC---CCC--EEee---
Confidence 3 322222 3444567777653 10 000 0000123456788888888543 32 122 5543
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842 472 SLTDERHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 472 ~~~t~~di~~l~~~l~~~~~~l~~~ 496 (499)
...+++||++++++|+++.+++.+.
T Consensus 414 ~~~t~~~i~~~l~~l~~~l~~~~~~ 438 (453)
T 2cy8_A 414 AQHEREHVEHLVTTFDRVLDRLADE 438 (453)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5689999999999999998877543
No 220
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.72 E-value=1.5e-16 Score=162.24 Aligned_cols=251 Identities=10% Similarity=0.023 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHHH--
Q 010842 131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCKL-- 207 (499)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~~-- 207 (499)
.+++.+++++++|.+... .-++++|||+||..++.+..+ ++..|+++. ..|.++...+.+
T Consensus 67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g 129 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG 129 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence 455666799999987652 012255889999888765432 466777777 889888876643
Q ss_pred --------hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHHHHHHHH-
Q 010842 208 --------AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPLAEVANE- 274 (499)
Q Consensus 208 --------~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I~~ia~~- 274 (499)
.|+ +++.+|.+++ +.+|+++|+++|+++ +.+|+++. +++.+|.++|+++|+++|++
T Consensus 130 ~~~~~~~~~G~---~~~~v~~~~~--~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~ 198 (431)
T 3ht4_A 130 KGVGSFKEYNI---GYNAVPLTEG--GLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI 198 (431)
T ss_dssp CSSSCSGGGTC---EEEECCBCTT--SSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred cccchHHHcCC---EEEEeCCCCC--CCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence 677 8999998764 599999999998653 34777776 77778888999999999999
Q ss_pred -hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC---CCcceEEEEeCchhHHHhhcC--CccCCCCCC
Q 010842 275 -YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS---YLDCCCLWVKQPGLLVKALST--DPEYLKNKP 348 (499)
Q Consensus 275 -~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~---p~~~g~l~~r~~~~l~~~~~~--~~~yl~~~~ 348 (499)
+|++++||++|+.+..... .... .+|.++.+.||++++ |.| |+++.++ +.. +.+.. ....+..
T Consensus 199 ~~~~~livDea~~~~~~~~~---~~~~---g~Di~~~S~sK~lgg~~~~~G-G~v~~~~-~li-~~l~~~~~~~~~g~-- 267 (431)
T 3ht4_A 199 KPDVVVFVDNCYGEFIEEQE---PCHV---GADLMAGSLIKNPGGGIVKTG-GYIVGKE-QYV-EACAYRLTSPGIGA-- 267 (431)
T ss_dssp CTTCEEEEECTTCTTSSSCC---GGGT---TCSEEEEETTSGGGTTTCSSC-EEEEECH-HHH-HHHHHHHSCTTTTT--
T ss_pred CCCCEEEEeCCChhhccCCC---cccc---CCeEEEcCccccCCCCCCCce-EEEEecH-HHH-HHHHHHhccCCccc--
Confidence 9999999999988753221 1111 389999999999765 444 7777654 322 22211 1111110
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-----EEEEE
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-----LVCFR 423 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f~ 423 (499)
..+-.+.. .|+.++ +...+..++++..++++++.+.|++. ++++... ... ++.+.
T Consensus 268 --------------~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~-~~~~~~~li~~i~ 327 (431)
T 3ht4_A 268 --------------EAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTSPA-WNAPRTDLIQSVQ 327 (431)
T ss_dssp --------------SCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEESC-TTSCCSSSCCEEE
T ss_pred --------------ccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEecCC-CCCCCccEEEEEE
Confidence 01111111 122332 23455778888999999999999987 5666432 222 56666
Q ss_pred ecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842 424 LNPYPHSGSADTEMLNRKLLDWVNST 449 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~ 449 (499)
+.. .+...++++.|.+.
T Consensus 328 l~~---------~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 328 FDD---------KDRMIAFCQAIQYA 344 (431)
T ss_dssp CCC---------HHHHHHHHHHHHHT
T ss_pred eCC---------HHHHHHHHHHHHhc
Confidence 642 23345666666654
No 221
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.71 E-value=3.8e-16 Score=159.57 Aligned_cols=309 Identities=10% Similarity=-0.010 Sum_probs=174.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK 206 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~ 206 (499)
......++.++++++++ +.+ ..++++|||+|+..++..++... + ++.+|......|.....+..
T Consensus 90 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~ 153 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT-------G-RDKIIKFEGCYHGHADMFLV 153 (427)
T ss_dssp CCHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEEETCCCCSCGGGCS
T ss_pred CCHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCCHHHHH
Confidence 35566777888999987 322 35999999999999998877532 1 23344434444543322211
Q ss_pred HhCCCC----------------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hh
Q 010842 207 LAGVSP----------------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VE 266 (499)
Q Consensus 207 ~~G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~ 266 (499)
..|.+. ..++.+|.+ |+++|++++++. ...+.+|+++..++++|.+.| ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~ 223 (427)
T 3fq8_A 154 KAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLE 223 (427)
T ss_dssp SCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHH
T ss_pred hcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHH
Confidence 111100 013333321 899999999762 223567777777788899988 99
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842 267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN 346 (499)
Q Consensus 267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~ 346 (499)
+|.++|++||+++++|++|+++ ...........++ ..|.++++ |.++.....|+++.++ + +.+.+.....+..
T Consensus 224 ~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~~-~-~~~~~~~~~~~~~- 296 (427)
T 3fq8_A 224 GLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGKR-E-IMQLVAPAGPMYQ- 296 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEECH-H-HHTTBTTTSSBCC-
T ss_pred HHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEcH-H-HHHhhccCCCccc-
Confidence 9999999999999999999866 3221111112232 25777776 9998656688887644 2 2222221111110
Q ss_pred CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEE
Q 010842 347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCF 422 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f 422 (499)
..+.....+.+.+++..+..-.-+++.++..++.+++++.|++ .+..... +....++.+
T Consensus 297 ----------------~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~ 359 (427)
T 3fq8_A 297 ----------------AGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACG-GQVSGMFGF 359 (427)
T ss_dssp ----------------CCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEE
T ss_pred ----------------cCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-EEeeeEEEE
Confidence 0111123444444444332100034455566666666666654 2211111 223345566
Q ss_pred EecCCCCCC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 423 RLNPYPHSG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 423 ~~~~~~~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
.+......+ .........++.+.+.++|.++ .+.. .. |+++ +..+|++||++++++|+++.++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v-~~~~---~~--r~~~-~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 360 FFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYL-APSQ---FE--AGFT-SLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEEC-CSST---TS--CEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccHHHHHHHHHHHHHCCcEE-ecCC---CC--CEEe-eCcCCHHHHHHHHHHHHHHHHh
Confidence 654321000 0001223467788888888543 3221 11 4444 3568999999999999998765
No 222
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.71 E-value=3.7e-15 Score=154.16 Aligned_cols=311 Identities=10% Similarity=0.016 Sum_probs=177.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh--H---------------hhhhccCCe
Q 010842 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD--A---------------VGAENMHKL 189 (499)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~--~---------------~~~~g~~~~ 189 (499)
..++++++.+.++++++...+ ..+|++|||+||..|+.+++..... . .+..|.++.
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~ 180 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY 180 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence 456777776667776643222 3599999999999999999754210 0 000111123
Q ss_pred EEEc-CCCCchhHHHHHHHhCC--------CCCCeEEeeCCCCCCC-------------ccCHHHHHHHHHHHHHcCCcc
Q 010842 190 VVYG-SDQTHSTFAKVCKLAGV--------SPANIRALPTSVDANF-------------SLSPQLLRRAVEADVEAGLVP 247 (499)
Q Consensus 190 ~i~~-s~~~H~s~~ka~~~~G~--------g~~~v~~v~~~~~~~~-------------~~d~~~L~~~i~~~~~~g~~p 247 (499)
.|++ ....|.+..-++.+.|. ....+..+++... .+ ..|+++|+++|++....+..+
T Consensus 181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 259 (472)
T 1ohv_A 181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRL-KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV 259 (472)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCC-CSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcc-cCccccccccchhHHHHHHHHHHHHHHhcCCCCCCE
Confidence 4444 44556665555555442 1111122333210 01 236899999997643222235
Q ss_pred EEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccc-cCCCc
Q 010842 248 LFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWL-LSYLD 321 (499)
Q Consensus 248 ~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l-~~p~~ 321 (499)
.+|++....+++|.+.| +++|.++|++||++||+|++|.++......+.....++. ..|.++++ |++ +
T Consensus 260 ~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~---- 333 (472)
T 1ohv_A 260 AGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT---- 333 (472)
T ss_dssp EEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----
T ss_pred EEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----
Confidence 57777766778998877 999999999999999999999864321110111112332 37888776 984 3
Q ss_pred ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHH
Q 010842 322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKM 398 (499)
Q Consensus 322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~ 398 (499)
.|++. +. . +. ...+... ..+-....+... +++..+.. +++.++..+++++
T Consensus 334 GG~~~-~~-~-~~---~~~~~~~------------------~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~ 386 (472)
T 1ohv_A 334 GGFFH-KE-E-FR---PNAPYRI------------------FNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKV 386 (472)
T ss_dssp EEEEE-CG-G-GS---CSSSSSS------------------CCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred CCccC-ch-h-hc---ccccccc------------------cCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHH
Confidence 25554 32 1 10 0000000 011111233333 34443322 2356677777888
Q ss_pred HHHHHhcC----CC-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCC
Q 010842 399 FEGFVKSD----PR-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASL 473 (499)
Q Consensus 399 l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~ 473 (499)
+.+.|+++ |+ +.-+ .+...++.|.+.. ......+.++|.++|..+. +. +..++|+++. ..
T Consensus 387 l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~---------~~~~~~~~~~l~~~Gv~~~-~~---g~~~iRi~~~-~~ 451 (472)
T 1ohv_A 387 LLTGLLDLQARYPQFISRV-RGRGTFCSFDTPD---------ESIRNKLISIARNKGVMLG-GC---GDKSIRFRPT-LV 451 (472)
T ss_dssp HHHHHHHHHHHCTTTCEEE-EEETTEEEEECSS---------HHHHHHHHHHHHHTTEECE-EE---TTTEEEECCC-TT
T ss_pred HHHHHHHHHhhCCCcEEee-cCCceEEEEEeCC---------hhHHHHHHHHHHHCCeEEe-cC---CCCEEEEECC-CC
Confidence 88777653 43 4322 2334455665432 2235678888888885433 21 3457999984 78
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 010842 474 TDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 474 ~t~~di~~l~~~l~~~~~~l 493 (499)
+|++||++++++|.++.+++
T Consensus 452 ~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 452 FRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp CCHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999887653
No 223
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.71 E-value=2.5e-15 Score=153.87 Aligned_cols=311 Identities=12% Similarity=0.039 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
.....++.++++++++ ..+ ..++++|||+|+..++.++|... + ++.+|+.....|.....+...
T Consensus 95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~ 158 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT-G-------RDLILKFDGCYHGSHDAVLVA 158 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEEETCCCCSSGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCCCHHHHHh
Confidence 4455667777888884 222 35999999999999999886432 1 233444343344322211111
Q ss_pred -------------hCCC---CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 208 -------------AGVS---PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 208 -------------~G~g---~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
.|+. ...++.+|. .|+++|+++|++.. ..+.+|+++..++++|.+.| +++
T Consensus 159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 228 (434)
T 2epj_A 159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA 228 (434)
T ss_dssp CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence 1220 013555553 38999999997531 13456666666667899888 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
|.++|++||+++++|++|+++ ...+.......++ ..|.+++ +|+++.....|+++.+++ +.+.+.......
T Consensus 229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~~--~~~~l~~~~~~~--- 299 (434)
T 2epj_A 229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSRE--VMSLLTPQGKVF--- 299 (434)
T ss_dssp HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECHH--HHTTBTTTSSBC---
T ss_pred HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecHH--HHHhhccCCCcc---
Confidence 999999999999999999865 3221111111233 3677655 599987667899888752 222222100000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEe
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRL 424 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~ 424 (499)
...+-....+.+.+++..+..-.-+++.++..++++++.+.|+++. ++....++..+++.+.+
T Consensus 300 --------------~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~ 365 (434)
T 2epj_A 300 --------------NAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFI 365 (434)
T ss_dssp --------------CCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE
T ss_pred --------------cCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEE
Confidence 0011112334443333333110013456777778888888877641 23211123445667766
Q ss_pred cCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 425 NPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 425 ~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
....... + ........++.+.|.++|+. +.+.. ...+|++ ..+|++|+++++++|+++.+++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 366 GVEEVSNAAQARKADKKFYVKLHEEMLRRGVF-IAPSN---LEAVFTG---LPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp TCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEE-CCSST---TSCEECC---TTCSHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCcccchhccccCHHHHHHHHHHHHHCCeE-EeccC---CCcEEEe---ccCCHHHHHHHHHHHHHHHHHHh
Confidence 4310000 0 00012356788888888843 33321 1234543 45799999999999999987763
No 224
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.71 E-value=3.7e-15 Score=152.33 Aligned_cols=307 Identities=8% Similarity=0.005 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842 129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA 208 (499)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~ 208 (499)
....++.++++++++-++ ..++++|||+|+..|+..++... + ++.+|......|.....++...
T Consensus 93 ~~~~~la~~l~~~~~~~~--------~v~~~~sGsea~~~al~~a~~~~-------~-~~~ii~~~~~yhg~~~~~~~~~ 156 (429)
T 4e77_A 93 EMEVKMAQLVTDLVPTMD--------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADCLLVKA 156 (429)
T ss_dssp HHHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCC---------
T ss_pred HHHHHHHHHHHhhCCCCC--------EEEEeCcHHHHHHHHHHHHHHhh-------C-CCEEEEEcCccCCCChhhhhhc
Confidence 455556677888886222 35999999999999999887532 1 2334444445565554333222
Q ss_pred CCCCC----------------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842 209 GVSPA----------------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL 268 (499)
Q Consensus 209 G~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I 268 (499)
|.|.. .+..+|. -|+++|++++++. +..+.+|++...+++.|.+.| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 22110 1111211 2899999998752 123445666555566788877 9999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
.++|++||++||+|++|+++ ...........++ ..|.++++ |.++.+...|+++.+++ +.+.+.......
T Consensus 227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~--~~~~l~~~~~~~---- 296 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAFGGRRE--VMNALAPTGPVY---- 296 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEEEECHH--HHTTBTTTSSBC----
T ss_pred HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEEEECHH--HHHHhccCCCcc----
Confidence 99999999999999999876 3221111112232 25776664 99887677888776542 222222110000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL 424 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~ 424 (499)
...+.....+.+.+++..+..-.-+++.++..++.+++++.|++ .+... ..+....++.+.+
T Consensus 297 -------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~g~~~~~~~ 362 (429)
T 4e77_A 297 -------------QAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPL-VVNHVGGMFGLFF 362 (429)
T ss_dssp -------------C--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCC-EEEEETTEEEEEC
T ss_pred -------------ccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCce-EEEEeeeEEEEEE
Confidence 00111223344444444332100134455566666666666654 33211 1123345566665
Q ss_pred cCCCCCCc-----chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 425 NPYPHSGS-----ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 425 ~~~~~~~~-----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
........ ........++.+.|.++|.++ .+. +...+|++ ..+|++|+++++++|+++.++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-~~~---~~~~~~~~---~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 363 TNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYL-APS---AFEAGFMS---LAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp CSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCEECC---TTCCHHHHHHHHHHHHHHHTT
T ss_pred ccCcccccccccccccHHHHHHHHHHHHHCCeEE-eec---CCCCEEEe---ccCCHHHHHHHHHHHHHHHHh
Confidence 43210000 000123467888888888543 322 11234543 557999999999999987653
No 225
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.69 E-value=8.8e-16 Score=155.35 Aligned_cols=323 Identities=10% Similarity=-0.004 Sum_probs=200.9
Q ss_pred hHHHHHHHHHHHc-c-cCCcccccChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACF-N-SVGFNWLASPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177 (499)
Q Consensus 102 ~~~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~ 177 (499)
++..+.+... .. + .....|....+..++.+++.+|+.+..+.+ ++. -..++|.||++|+..++.+..+.
T Consensus 48 ~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----i~i~~t~G~~~al~~~~~~l~~~- 120 (405)
T 3k7y_A 48 IFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK-----ICTIQCIGGTGAIFVLLEFLKML- 120 (405)
T ss_dssp CCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC-----EEEEEEEHHHHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccc-----eEEEEcCchHHHHHHHHHHHHhc-
Confidence 3455555544 32 2 234568778889999999999986554432 110 02478999999988877765431
Q ss_pred HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC-C
Q 010842 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG-T 256 (499)
Q Consensus 178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-t 256 (499)
.+ ..|+++.+++..+..+++..|. +++.||+.++++|.+|+++|++++++.. ...+|+++.+ +
T Consensus 121 --------~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~ 184 (405)
T 3k7y_A 121 --------NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCY 184 (405)
T ss_dssp --------TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSC
T ss_pred --------CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCC
Confidence 14 6799999999999999999999 9999998433358999999999997521 1225666654 7
Q ss_pred Cccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-c-c---chhhhcCCCCCceeEecccccccC-CCcceEEEE
Q 010842 257 TSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-P-E---FRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWV 327 (499)
Q Consensus 257 t~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~-~---~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~ 327 (499)
||||.+ +.+++|+++|++|++|+++|.+|..+.... + . .+... ....--.++.++.|.++. ..-+|++++
T Consensus 185 NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE-EKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH-TTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH-hcCCcEEEEeeCCccCCCccccceEEEE
Confidence 999999 457788899999999999999998764321 0 0 11111 111112456788999985 467888764
Q ss_pred --eCchhHHHh---hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHH
Q 010842 328 --KQPGLLVKA---LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIR 394 (499)
Q Consensus 328 --r~~~~l~~~---~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~ 394 (499)
.+++...+. +.......... ...+...++...+. .+.++++.++..+
T Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~ 323 (405)
T 3k7y_A 264 VCKNQEEKKIVFNNLCFIVRKFYSS--------------------PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITN 323 (405)
T ss_dssp ECSSHHHHHHHHHHHHHHHHTTTSS--------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHhcccCC--------------------CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 444322111 11000000000 01233333322221 1234555566778
Q ss_pred HHHHHHHHHh----cCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEE
Q 010842 395 LAKMFEGFVK----SDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRF 467 (499)
Q Consensus 395 ~a~~l~~~L~----~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi 467 (499)
.++++.+.|+ +.. +|++. +|+.+.+.|.-.+ .+++++|.+.| +++.+. + |+
T Consensus 324 ~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~~~l~-------------~~~~~~L~~~g-V~v~p~---~----Ri 381 (405)
T 3k7y_A 324 NRILFFNKLETYQKKYNLNYDWNVY-KKQRGLFSFVPLL-------------AKIAEHLKTHH-IYIINN---G----RI 381 (405)
T ss_dssp HHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSSEEECGGG-------------GGGTTTTTTTT-EECCTT---S----EE
T ss_pred HHHHHHHHHHhhhhhcCCCCCCccc-cCCceEEEecCCC-------------HHHHHHHHHCC-EeecCC---C----eE
Confidence 8889999998 652 14544 4555555442111 12345564445 444442 2 99
Q ss_pred eccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 468 AVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 468 ~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
+++ ..++++|++++++|.++.++
T Consensus 382 s~a--~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 382 NVS--GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp EGG--GCCTTHHHHHHHHHHHHHHC
T ss_pred EEe--ccCHHHHHHHHHHHHHHHhh
Confidence 985 35778999999999998764
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.68 E-value=5.3e-16 Score=162.98 Aligned_cols=347 Identities=12% Similarity=0.034 Sum_probs=195.3
Q ss_pred ccccChhhHHHHHH-HHHHHHHHcCC---CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC
Q 010842 120 NWLASPASTELEIV-VMDWLATMLKL---PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD 195 (499)
Q Consensus 120 ~~~~~p~~~~lE~~-~~~~la~l~g~---~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~ 195 (499)
.|...++...+.++ +..|+.+.++. +... ...++|+|+++|+..++.+...+.. ..++..|+++.
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-----~~I~~t~G~~eal~~~~~~l~~~~l------~~~Gd~Vlv~~ 201 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSES-----VNLFAVEGGTAAMAYIFESLKLNGL------LKAGDKVAIGM 201 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGG-----EEEEEEEHHHHHHHHHHHHHHHTTS------SCTTCEEEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCc-----ceEEEECCHHHHHHHHHHHhhhhhc------CCCCCEEEEeC
Confidence 45555455555555 44566666543 1110 1468899999998877765321100 01466788899
Q ss_pred CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842 196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA 272 (499)
Q Consensus 196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia 272 (499)
++|..+..++.+.+.|. +++.+|++++++|.+|+++|++.+.. .+.+|+++.++||||.+-+ +++|+++|
T Consensus 202 P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a 274 (546)
T 2zy4_A 202 PVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274 (546)
T ss_dssp SCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 99999998877665432 78889988766689999999887632 2447777899999999965 66778888
Q ss_pred --HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc--------
Q 010842 273 --NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-------- 341 (499)
Q Consensus 273 --~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-------- 341 (499)
+++|+++++|++|+.+.......... ....+.++.+.+|+++.| .-+|+++..+...........+
T Consensus 275 ~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~ 351 (546)
T 2zy4_A 275 AEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351 (546)
T ss_dssp HHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred HhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHH
Confidence 78999999999998764311111111 112467788999999755 4589998877532222111100
Q ss_pred -cCCCCCCCCCCCcccC--------CCcccCCCCCCCcHHHHH----HH-HHh--cHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842 342 -EYLKNKPSESNSVVDF--------KDWQVGTGRRFKSLRLWM----VL-RSY--GVLNLQSHIRSDIRLAKMFEGFVKS 405 (499)
Q Consensus 342 -~yl~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l-~~~--g~~g~~~~~~~~~~~a~~l~~~L~~ 405 (499)
.|-...... ....+ .......+.........+ ++ ..+ +....++..+...++.+.+.+.|.
T Consensus 352 ~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~- 428 (546)
T 2zy4_A 352 HRYRSLLPDV--RSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG- 428 (546)
T ss_dssp HHHTTTCSCG--GGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred HHhhhccccc--cchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 000000000 00000 000000000111111111 11 222 233455555666667777777775
Q ss_pred CCCeEEEcCCCceEE-EEEecCCC--CCCcchh-----H-HHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCc
Q 010842 406 DPRFEIVVPRHFALV-CFRLNPYP--HSGSADT-----E-MLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTD 475 (499)
Q Consensus 406 ~~~~~~~~~~~~~~v-~f~~~~~~--~~~~~~~-----~-~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t 475 (499)
. ++.. .++..+.+ .+++.... .....-. + .....+.+.+.+.|+++..+..+. +..++|+++. ..+
T Consensus 429 ~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~--~~~ 504 (546)
T 2zy4_A 429 M-PPLR-DENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA--NLN 504 (546)
T ss_dssp S-SCCC-CTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS--SSC
T ss_pred C-Cccc-CCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec--cCC
Confidence 3 2332 24444443 44442100 0000000 0 012335566677787666554443 3467999995 357
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 010842 476 ERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 476 ~~di~~l~~~l~~~~~~l~ 494 (499)
++++++++++|+++.+++.
T Consensus 505 ~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 505 EYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8999999999999887654
No 227
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.68 E-value=2.6e-15 Score=151.61 Aligned_cols=294 Identities=11% Similarity=-0.035 Sum_probs=184.8
Q ss_pred cccccChhh-----HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe----
Q 010842 119 FNWLASPAS-----TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL---- 189 (499)
Q Consensus 119 ~~~~~~p~~-----~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~---- 189 (499)
..|....+. .++++++.+|+. ..|.+... ....++|+|+++|+..++.+..+ ++.
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~ 120 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV 120 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence 456555665 889999888876 44653110 01468999999998888776643 445
Q ss_pred EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA 269 (499)
Q Consensus 190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~ 269 (499)
.|+++.++|.++..+++..|. +++.+++|.++ ++ . ..+.+|+.+.++||||.+-+ +|+
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~~---l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~ 178 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAWG---FD--------K------KGPYIELVTSPNNPDGTIRE--TVV 178 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCB---TTEEEEEESTT---CC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred eEEEcCCCchhHHHHHHHcCC---eEEEecCCHHH---cC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence 789999999999999999999 99999987643 32 0 12457778999999999975 554
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKP 348 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~ 348 (499)
+.++.+++++++|++|+.. .... +......+.+..+++|.++.| ..+|++++.++... +.+.....+...
T Consensus 179 ~~~~~~~~~ii~De~y~~~-----~~~~-l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~-~~l~~~~~~~~~-- 249 (391)
T 3bwn_A 179 NRPDDDEAKVIHDFAYYWP-----HYTP-ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVA-KKMVEYIIVNSI-- 249 (391)
T ss_dssp -----CCCEEEEECTTCST-----TTSC-CCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHH-HHHHHHHHHHHS--
T ss_pred HHhhcCCCEEEEeCCCCCC-----CCCc-cccCCCCeEEEEechhhcCCCccceEEEEecCHHHH-HHHHHHhccccc--
Confidence 4222233999999999731 1111 111223678889999998755 34688887554433 222111111000
Q ss_pred CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842 349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 416 (499)
....+..+++...+. .+.++++.++..++++++.+.|++.|++++..+..
T Consensus 250 ------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~ 311 (391)
T 3bwn_A 250 ------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPE 311 (391)
T ss_dssp ------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCC
T ss_pred ------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence 012233333333331 24577788888899999999999988877653211
Q ss_pred c-------------eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHH
Q 010842 417 F-------------ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAA 482 (499)
Q Consensus 417 ~-------------~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l 482 (499)
. ..+++.+... +.+.+.+.+.|+.+..+..+. +..++|++++ +++++++++
T Consensus 312 ~~~~f~~~~~~~~g~~~~~~~~~~------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~---~~~e~i~~~ 376 (391)
T 3bwn_A 312 AFCNYFGKSLESYPAFAWLGTKEE------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML---SREDVFNVF 376 (391)
T ss_dssp EEETTTTEEECCCCSEEEEEESSS------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC---SCHHHHHHH
T ss_pred cccccccccCCCcceEEEecCCcH------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec---CCHHHHHHH
Confidence 1 1344555321 123445556786555544443 2468999996 488999999
Q ss_pred HHHHHHHHHH
Q 010842 483 WELIMEGADR 492 (499)
Q Consensus 483 ~~~l~~~~~~ 492 (499)
+++|+++.++
T Consensus 377 ~~~L~~~~~~ 386 (391)
T 3bwn_A 377 LERLANMKLI 386 (391)
T ss_dssp HHHHHSCC--
T ss_pred HHHHHHHHHh
Confidence 9999876543
No 228
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.62 E-value=8.1e-14 Score=142.11 Aligned_cols=305 Identities=13% Similarity=0.038 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL 207 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~ 207 (499)
..++.++.++++++++ ..+ ..++++|||+|+..++.+||... + ++.+|+.....|.....+...
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~-------~-~~~vi~~~~~yhg~~~~~~~~ 154 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT-------G-RPYIVKFRGNYHGHADGLLVE 154 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCCCCGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCcHHHHHh
Confidence 4566677777888885 222 35899999999999999876432 1 233444443445432222211
Q ss_pred hCC-----------CC-----CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842 208 AGV-----------SP-----ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP 267 (499)
Q Consensus 208 ~G~-----------g~-----~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~ 267 (499)
.|. |. ..++.+|. .|+++|++++++.. ..+.+|+++..++++|.+-| +++
T Consensus 155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 224 (424)
T 2e7u_A 155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA 224 (424)
T ss_dssp CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 111 10 13444442 38999999997531 12445555554455898877 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842 268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~ 347 (499)
|.++ ++||+++++|++|+++ ...+.......++ ..|.++ ..|+++.+..+|+++.+++ +.+.+.......
T Consensus 225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~~~~~~~--~~~~~~~~~~~~--- 294 (424)
T 2e7u_A 225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLVT--LGKILGGGLPAAAYAGRRE--IMEKVAPLGPVY--- 294 (424)
T ss_dssp HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEE--ECGGGGTTSSCEEEEECHH--HHTTBTTTSSBC---
T ss_pred HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchhh--hhhhhhCCcceEEEEEcHH--HHhhhcccCCcc---
Confidence 9999 9999999999999875 3221111112233 267664 4699987677899888652 222222100000
Q ss_pred CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEE
Q 010842 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFR 423 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~ 423 (499)
...+-....+.+.+++..+.. +..+++.++..++.+++.+.|+++ .++....++..+++.+.
T Consensus 295 --------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~ 360 (424)
T 2e7u_A 295 --------------QAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVF 360 (424)
T ss_dssp --------------CCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEE
T ss_pred --------------cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEE
Confidence 001112233444444433311 112456777778888888888764 12311112344566666
Q ss_pred ecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 424 LNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 424 ~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
+....... + ........++.+.|.++|.. +.+.. ...+|++ ...|++++++++++|+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 361 FTEGPVVTFQDARRTDTELFKRFFHGLLDRGIY-WPPSN---FEAAFLS---VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEE-CCSSS---SSCEECC---TTCCHHHHHHHHHHHHHH
T ss_pred EeCCCCcchhhhcccCHHHHHHHHHHHHHCCeE-EeccC---CCceEee---ccCCHHHHHHHHHHHHHh
Confidence 64310000 0 00022356788888888844 33322 1225543 457999999999999875
No 229
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.60 E-value=1.8e-13 Score=135.60 Aligned_cols=317 Identities=13% Similarity=0.059 Sum_probs=191.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---C
Q 010842 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---T 197 (499)
Q Consensus 121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~ 197 (499)
|.......++|.-+++..+++||.+...| +--+=..||+.||+.+..+..+ |++.|+.-+. .
T Consensus 92 YgGce~vD~iE~la~~rak~lF~a~~A~w----~VNVQP~SGs~AN~avy~All~-----------PGD~ilg~~l~~GG 156 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGG 156 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC------------CCCEECBC-----
T ss_pred cCCChHHHHHHHHHHHHHHHHhCCCcccc----CCCCCcCCHHHHHHHHHHHHcC-----------CCCEEEecccCCCC
Confidence 34455678999999999999999987521 0025566999999988877643 5666765443 3
Q ss_pred chhHHH-----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH
Q 010842 198 HSTFAK-----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA 272 (499)
Q Consensus 198 H~s~~k-----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia 272 (499)
|.+.-. .....|..- +.+..++|++ ++.+|.|++++...+.+ |.+|++-. +.+--.-|++++.+||
T Consensus 157 HltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~-t~~IDyd~~~~~A~~~k-----PklIi~G~--SaY~r~id~~~~reIA 227 (490)
T 3ou5_A 157 HLTHGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVC 227 (490)
T ss_dssp ------------------------CBCEETT-TTEECHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHH
T ss_pred cccccccCCCcccccccccc-cccccccCCC-CCcccHHHHHHHHhhcC-----CCeEEECC--ccCccccCHHHHHHHH
Confidence 544432 122233310 3444556654 46999999999987753 66655544 4455667999999999
Q ss_pred HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh-------------HHHhhcC
Q 010842 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL-------------LVKALST 339 (499)
Q Consensus 273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~-------------l~~~~~~ 339 (499)
++.|.+|++|.||-.+.+....+...+ +.||++|.+.||.|.+|. +|++++++... +.+.+..
T Consensus 228 d~vGA~Lm~DmAHiaGLVA~g~~psP~---~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~ 303 (490)
T 3ou5_A 228 DEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRINF 303 (490)
T ss_dssp HHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHHHH
T ss_pred hhcccEEEechhhhhhhhcccccCCcc---ccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHHHh
Confidence 999999999999977665544443333 359999999999999995 67888876311 0000000
Q ss_pred CccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCc
Q 010842 340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHF 417 (499)
Q Consensus 340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~ 417 (499)
-++. +++++.-...+ +...+++..-...++++.++..++|+.|.+.|.+. |++++. ..+.
T Consensus 304 ---aVFP--------------g~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdn 365 (490)
T 3ou5_A 304 ---AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDN 365 (490)
T ss_dssp ---HHTT--------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred ---hcCc--------------cccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCc
Confidence 0000 12333222222 22333443334667889999999999999999987 999985 4566
Q ss_pred eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHH
Q 010842 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~ 489 (499)
..+.+.+.+.+. ..++..+.|.+.|+.+-..+... ....||+.. +.....++|++++.+.|.++
T Consensus 366 HlvLvDl~~~g~--------tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~ 437 (490)
T 3ou5_A 366 HLVLVDLRPKGL--------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp SEEEEECGGGTC--------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEeccccCC--------CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 777777655320 12334445555675432211111 123599976 22345778998888888775
Q ss_pred HH
Q 010842 490 AD 491 (499)
Q Consensus 490 ~~ 491 (499)
+.
T Consensus 438 l~ 439 (490)
T 3ou5_A 438 VN 439 (490)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 230
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.57 E-value=3.9e-13 Score=136.09 Aligned_cols=327 Identities=11% Similarity=0.028 Sum_probs=194.8
Q ss_pred HHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842 105 FLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183 (499)
Q Consensus 105 ~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~ 183 (499)
.+.+......+.+. ..|....+..++.+++.+++ +|-.... +.-..+.|.|||.|+..++........
T Consensus 66 ~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~----- 134 (420)
T 4h51_A 66 VVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD----- 134 (420)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC-----
T ss_pred HHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc---cccceeeecCchHHHHHHHHHHHHhcC-----
Confidence 34444444444333 35888888999999876654 3322110 001246688999998877765533211
Q ss_pred hccCCeEEEcCCCCchhHHHHHHHhCCCCCCe-EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI-RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v-~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.++..|+++++++.+....++..|. .. ...+..+.+++.+|.+.+.+.+...+ ....+++.+.++||||.+
T Consensus 135 --~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~ 206 (420)
T 4h51_A 135 --AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAP---DGSVFILHQCAHNPTGVD 206 (420)
T ss_dssp --TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSC---SSCEEEEESSSCTTTCCC
T ss_pred --CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccC---CCcEEEEeCCCCCCCCCC
Confidence 1567899999999999999999998 64 44454433457899999998886532 234567778899999999
Q ss_pred ---CChhHHHHHHHHhCCEEEeeccccchhccCccchh----hhcCCCCCceeEecccccccCC-CcceEEEEeCchh--
Q 010842 263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH----YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL-- 332 (499)
Q Consensus 263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~----~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~-- 332 (499)
+.+++|+++|+++++++++|.+|.++......... .......--.++.+..|.++.+ .-+|++.+..+..
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~ 286 (420)
T 4h51_A 207 PSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK 286 (420)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH
T ss_pred CCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH
Confidence 66889999999999999999999887543211110 0111111224566788987655 4588887654421
Q ss_pred HHHhhcC-----CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842 333 LVKALST-----DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF 399 (499)
Q Consensus 333 l~~~~~~-----~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l 399 (499)
..+..+. ...|... ...........+. .+.++.+.++..++++.+
T Consensus 287 ~~~~~~~l~~~~r~~~s~~----------------------p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l 344 (420)
T 4h51_A 287 RADVKSVMDSLIREEYTCP----------------------PAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTV 344 (420)
T ss_dssp HHHHHHHHHHHHHTTTSSC----------------------CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccCcc----------------------hHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111110 0111100 1222222222222 234566677788888899
Q ss_pred HHHHhcCC--C-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842 400 EGFVKSDP--R-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476 (499)
Q Consensus 400 ~~~L~~~~--~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~ 476 (499)
.+.|++.. + |..+.+ +.+.++| .+.. .+.++.|.+.| +++.+. | ||+++ ..++
T Consensus 345 ~~~L~~~g~~~~~~~i~~-q~GmF~~--~gls-----------~e~v~~L~e~~-Vy~~~~---g----Ris~A--gl~~ 400 (420)
T 4h51_A 345 YDELLRLQTPGSWEHVIN-QIGMFSF--LGLS-----------KAQCEYCQNHN-IFITVS---G----RANMA--GLTH 400 (420)
T ss_dssp HHHHHHTTCSSCCTHHHH-CCSSEEE--CCCC-----------HHHHHHHHHTT-EECCTT---C----EEEGG--GCCH
T ss_pred HHHHHHhCCCCCCCeecC-CCceEEe--cCcC-----------HHHHHHHHhCC-EEEcCC---C----EEEec--cCCH
Confidence 99998752 1 322222 2244443 2321 12234555666 444332 2 99985 3688
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 010842 477 RHVVAAWELIMEGADRLFKG 496 (499)
Q Consensus 477 ~di~~l~~~l~~~~~~l~~~ 496 (499)
+.|++++++|.++.+++.++
T Consensus 401 ~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 401 ETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp HHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999887654
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.56 E-value=1.5e-14 Score=147.75 Aligned_cols=306 Identities=9% Similarity=-0.062 Sum_probs=190.7
Q ss_pred hHHHHHHHHHHHcc-cCC--cccccCh-h---hHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHH
Q 010842 102 TAGFLGEMLCACFN-SVG--FNWLASP-A---STELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIA 172 (499)
Q Consensus 102 ~~~~~~~~l~~~~n-~~~--~~~~~~p-~---~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ 172 (499)
++..+.+.+...+. ... ..|.... + ..++++++.+|+.+..+. +++ ..++|+|+++|+..++.+
T Consensus 70 ~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-------~iv~t~G~~~al~~~~~~ 142 (427)
T 2hox_A 70 EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-------YIVFGVGVTQLIHGLVIS 142 (427)
T ss_dssp HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-------EEEEESHHHHHHHHHHHH
T ss_pred CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-------EEEEeCCHHHHHHHHHHH
Confidence 33445555555552 222 2255444 5 688999988888876543 332 468999999998887776
Q ss_pred H--------HHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842 173 A--------RDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244 (499)
Q Consensus 173 a--------r~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 244 (499)
. .+ ++..|+++.+.|..+...++..|. +++. |.+|+++|+++++++
T Consensus 143 l~~~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~--------~~~d~~~l~~~~~~~---- 196 (427)
T 2hox_A 143 LSPNMTATPDA-----------PESKVVAHAPFYPVFREQTKYFDK---KGYV--------WAGNAANYVNVSNPE---- 196 (427)
T ss_dssp HSCCTTTCTTS-----------CCEEEEECSSCCHHHHHHHHHSCB---TTEE--------EEEEGGGGTTCSCGG----
T ss_pred HhhccccccCC-----------CCCEEEEeCCCcccHHHHHHHcCC---eeee--------ecCCHHHHHHhhcCC----
Confidence 5 21 567899999999999999999998 7652 357788888777543
Q ss_pred CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-Ccce
Q 010842 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCC 323 (499)
Q Consensus 245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g 323 (499)
+.+|+++.++||||.+-+ +. ++ +++.+.|.++-.. ....... ....+.+..+.+|.++.| .-+|
T Consensus 197 --~k~v~l~~p~NPtG~~~~-~~----l~--~~~~i~d~~~~~~---~~s~~~~---~~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 197 --QYIEMVTSPNNPEGLLRH-AV----IK--GCKSIYDMVYYWP---HYTPIKY---KADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp --GEEEEEESSCTTTCCCCC-CS----ST--TCEEEEECTTCST---TTSCCCS---CBCCSEEEEEHHHHTSCGGGCCE
T ss_pred --ceEEEEcCCCCCcccccH-HH----Hc--CCCEEEeecccCC---CCCcccc---CCCceEEEEeChhcCCCCCceEE
Confidence 347888899999999988 42 33 6778888766321 0011111 134789999999998755 4489
Q ss_pred EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--H-----------HHHHHHHH
Q 010842 324 CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--V-----------LNLQSHIR 390 (499)
Q Consensus 324 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~-----------~g~~~~~~ 390 (499)
+++++++.... .+.....+... ....+..+++...+. . +.+++..+
T Consensus 262 ~~~~~~~~l~~-~l~~~~~~~~~--------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~ 320 (427)
T 2hox_A 262 WALIKDESVYN-NLLNYMTKNTE--------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK 320 (427)
T ss_dssp EEEECCHHHHH-HHHHHHHHHTS--------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHH
T ss_pred EEEECCHHHHH-HHHHHHHhcCC--------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHH
Confidence 99887654432 22111111000 011233333333331 1 23445567
Q ss_pred HHHHHHHHHHHHHhcCCCeEE--Ec-C----------CC-ceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE
Q 010842 391 SDIRLAKMFEGFVKSDPRFEI--VV-P----------RH-FALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT 455 (499)
Q Consensus 391 ~~~~~a~~l~~~L~~~~~~~~--~~-~----------~~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~ 455 (499)
+..++.+++.+.|++.|++++ +. + |. ...+++++... ..++.+++. +.|+.+..
T Consensus 321 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~-----------~~~~~~~ll~~~gI~v~p 389 (427)
T 2hox_A 321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE-----------EDKDCYQTFQNGRINTQN 389 (427)
T ss_dssp HHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG-----------GGCSHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc-----------HHHHHHHHHHHCCEEEcC
Confidence 777888999999999888875 21 1 12 33444555421 123455554 56755444
Q ss_pred eeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842 456 HTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA 490 (499)
Q Consensus 456 ~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~ 490 (499)
+..+. +..++|++++ +++++++++++.|.++.
T Consensus 390 g~~f~~~~~~~Ris~~---~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 390 GVGFEASSRYVRLSLI---KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp GGGGTSCTTEEEEECS---SCHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 44443 3568999996 37889999999998765
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.52 E-value=4.2e-12 Score=129.21 Aligned_cols=302 Identities=12% Similarity=0.019 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
+|.++.+.+++++.-.+. ..|+++|||||..|+..||.... ++.+|......|-...-+....+
T Consensus 128 ~~~~lae~l~~~~p~~~~--------v~f~~SGsEA~e~AiklAr~~tg--------r~~ii~~~~~yHG~t~~~~~~~~ 191 (454)
T 4ao9_A 128 LEGRLARLICERFPQIEQ--------LRFTNSGTEANLMALTAALHFTG--------RRKIVVFSGGYHGGVLGFGARPS 191 (454)
T ss_dssp SHHHHHHHHHHHSTTCSE--------EEEESSHHHHHHHHHHHHHHHHT--------CCEEEEETTCBCSTTCBBSSSBC
T ss_pred HHHHHHHHHHHhCCCCCE--------EEEeCchHHHHHHHHHHHHhccc--------CCeEEEEeCCcCCcccccccccc
Confidence 445555668888743232 48999999999999999987641 22233344444543211100000
Q ss_pred CC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeec
Q 010842 210 VS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 210 ~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~ 283 (499)
-. ......+|. -|++.+++.+++.. ..+.+|++--.....|.+-| |++|.++|++||++|++|+
T Consensus 192 ~~~~~~~~~~~p~-------nd~~~l~~~l~~~~---~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DE 261 (454)
T 4ao9_A 192 PTTVPFDFLVLPY-------NDAQTARAQIERHG---PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDE 261 (454)
T ss_dssp TTSCCSEEEEECT-------TCHHHHHHHHHHTG---GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CccCCCCcccCCC-------chHHHHHHHHhhcC---CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEEC
Confidence 00 001222332 38899999987643 23445555554556788877 9999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363 (499)
Q Consensus 284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 363 (499)
++.| .....+.....|+. .|.+++. |.++..+..|.+..+.+ +.+.+......+.. .
T Consensus 262 V~tG--R~G~~~a~e~~gv~-PDi~t~g--K~lggG~Piga~~~~~e--i~~~~~~~~~~~~h----------------~ 318 (454)
T 4ao9_A 262 VMTS--RLAPHGLANKLGIR-SDLTTLG--KYIGGGMSFGAFGGRAD--VMALFDPRTGPLAH----------------S 318 (454)
T ss_dssp TTGG--GGSTTCHHHHHTCC-CSEEEEE--GGGGTTSSCEEEEECHH--HHGGGCTTTCSCCC----------------C
T ss_pred CCcC--CCccccchhccCCC-CcEEEec--cccCCCCcceeeeeHHH--HHHHHhhccCCccc----------------c
Confidence 9865 22222222334553 7888764 77766677888888764 22333221111111 1
Q ss_pred CCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEEcCCCceEEEEEecCCCCCCcc--
Q 010842 364 TGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PR-FEIVVPRHFALVCFRLNPYPHSGSA-- 433 (499)
Q Consensus 364 ~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~-- 433 (499)
.+-....+.+. ++|+.+-.+ +..++..++.++|++.|+++ +- .++-. ...++.+.+........+
T Consensus 319 ~T~~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~~~~~ 393 (454)
T 4ao9_A 319 GTFNNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTG--IGSLMNAHFVQGDVRSSEDL 393 (454)
T ss_dssp CTTTTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEE--ETTEEEEESCCSCCCSGGGG
T ss_pred CCCCCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEee--eceEEEEEEecCCCCCHHHH
Confidence 11122334444 444444333 34555666666666666542 21 11111 122344444321111100
Q ss_pred --hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 434 --DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 434 --~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
........+...|.++|+ ++.+. + .+.++ ...|++|||+++++|+++..++.
T Consensus 394 ~~~d~~~~~~~~~~ll~~Gv-~~~p~---~--~~~~s---~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 394 AAVDGRLRQLLFFHLLNEDI-YSSPR---G--FVVLS---LPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp TTCCHHHHHHHHHHHHHTTE-ECCTT---C--EEECC---TTCCHHHHHHHHHHHHHHHHHSG
T ss_pred HhhhHHHHHHHHHHHHHCCE-EEcCC---C--CEEEe---CCCCHHHHHHHHHHHHHHHHhcc
Confidence 113455677788888884 33332 1 23333 44789999999999999988753
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.46 E-value=4.1e-10 Score=115.00 Aligned_cols=316 Identities=13% Similarity=0.053 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG 209 (499)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G 209 (499)
.+.++.+.|++++..+.. ...+|+++|||||..|+..||.... ++.+|......|-...-+....|
T Consensus 108 ~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t~--------r~~ii~~~~~yHG~t~~als~t~ 173 (456)
T 4atq_A 108 GYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLATG--------RDAVVAFDHAYHGRTNLTMALTA 173 (456)
T ss_dssp HHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHHC--------CCEEEEETTCCCCSSHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhhc--------CCeEEEEecccCCcccccccccc
Confidence 344455668888753221 1247899999999999999987531 23334444455655544444433
Q ss_pred CC----------CCCeEEeeCCCC----CCCccCHHHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----hhHHH
Q 010842 210 VS----------PANIRALPTSVD----ANFSLSPQLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----VEPLA 269 (499)
Q Consensus 210 ~g----------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l~~I~ 269 (499)
-. ...+..+|.... .....+.+.+++.++...+ .+..+.+|++--.....|.+-| +++|.
T Consensus 174 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr 253 (456)
T 4atq_A 174 KAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALS 253 (456)
T ss_dssp CCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHH
T ss_pred CccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHH
Confidence 21 124566665311 0012345666665554222 2334555665544455676643 89999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842 270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349 (499)
Q Consensus 270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 349 (499)
++|++||+.|++|.++.|+.....-+.....|+. .|.+++. |.++..+..|.++.+++- ...+. +..
T Consensus 254 ~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~-PDivt~g--K~lggg~P~~av~~~~~i--~~~~~--~~~------ 320 (456)
T 4atq_A 254 EWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVV-PDIITMA--KGIAGGLPLSAITGRADL--LDAVH--PGG------ 320 (456)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCC-CSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSC--TTS------
T ss_pred HHHhhcCCceEecccccccCCccccccccccCCC-Cchhhhh--hcccCcCCceeeEecHHH--Hhccc--ccC------
Confidence 9999999999999999886444333333334553 8999886 777666778888887642 11111 110
Q ss_pred CCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC--eEEEcCC--Cce
Q 010842 350 ESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR--FEIVVPR--HFA 418 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~--~~~~~~~--~~~ 418 (499)
...+-....+.+.++ |+.+-.++ +.++..++.+++.+.|++ .+. -.++.+. ...
T Consensus 321 ------------~~~Tf~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl 385 (456)
T 4atq_A 321 ------------LGGTYGGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGA 385 (456)
T ss_dssp ------------SCCSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETT
T ss_pred ------------CCCCCCCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecce
Confidence 011122234444444 44443443 345555556666655544 221 1112111 122
Q ss_pred EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR 492 (499)
Q Consensus 419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~ 492 (499)
++.+.+..+. +.+...+...++.+++.++|.++..... . ...+|+... ...|+++||+++++|.++.+.
T Consensus 386 ~~giel~~~~--~~~~~~~~~~~v~~~~~~~Gvl~~~~g~-~-~~~irl~Pp-L~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 386 MLAIELVQPG--SKEPNAELTKAVAAACLKEGVIILTCGT-Y-GNVIRLLPP-LVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp EEEEEEBCTT--SCCBCHHHHHHHHHHHHHTTEECEEECT-T-SCEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCC--CCCcCHHHHHHHHHHHHHCCCEEEecCC-C-CCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 3445543321 1112245677889999999965433221 1 246999873 567999999999999998764
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.11 E-value=2.2e-14 Score=146.94 Aligned_cols=304 Identities=11% Similarity=0.001 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHc-CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHH
Q 010842 128 TELEIVVMDWLATML-KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~-g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~ 205 (499)
...+.++.+.|++++ +.+. .++++|||+||..|+.++|... ++..|++.+. .|.+...++
T Consensus 139 ~~~~~~Lae~L~~~~p~~~~---------v~~~nSGseA~~~Aik~ar~~t---------gr~~ii~~~~~yHG~~~~~~ 200 (465)
T 2yky_A 139 TENEALFAEAVCDRFPSIDL---------VRFTNSGTEANLMALATATAIT---------GRKTVLAFDGGYHGGLLNFA 200 (465)
Confidence 344555556688887 4322 3899999999999999887432 2233444444 454443333
Q ss_pred ---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842 206 ---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW 278 (499)
Q Consensus 206 ---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~ 278 (499)
...|+.. .++.+|. -|+++|+++|++. +..+.+|++....+++|.+-| +++|.++|++||++
T Consensus 201 sg~~~~g~~~-~~~~~~~-------~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~l 269 (465)
T 2yky_A 201 SGHAPTNAPY-HVVLGVY-------NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGAL 269 (465)
Confidence 1122211 1222221 3789999999742 112335555554556897766 99999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC---CccCCCCCCCCCCCcc
Q 010842 279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST---DPEYLKNKPSESNSVV 355 (499)
Q Consensus 279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~ 355 (499)
|++|++|. + ...+.......++ ..|.+++ .|+++.....|+++.+++ +.+.+.. .+-+...
T Consensus 270 lI~DEv~~-~-r~g~~~a~~~~gv-~pDi~t~--sK~lg~G~piG~v~~~~~--i~~~l~~~~~g~~~~~~--------- 333 (465)
T 2yky_A 270 LIFDEVMT-S-RLSGGGAQEMLGI-SADLTTL--GKYIGGGMSFGAFGGRRD--LMERFDPARDGAFAHAG--------- 333 (465)
Confidence 99999998 4 2211111111122 2576654 599987666888877653 2122211 0001000
Q ss_pred cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEE--cCCCceEEEEEecCCCC--C
Q 010842 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIV--VPRHFALVCFRLNPYPH--S 430 (499)
Q Consensus 356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~--~~~~~~~v~f~~~~~~~--~ 430 (499)
++ .+.+.......++++.+..+ .+.++..++.+++++.|+++. ...+. ......++.+.+..... .
T Consensus 334 -----T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~ 404 (465)
T 2yky_A 334 -----TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSA 404 (465)
Confidence 00 11122222333344444332 456677777888888777642 12221 12334455555532100 0
Q ss_pred Cc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842 431 GS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494 (499)
Q Consensus 431 ~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~ 494 (499)
.+ ........++.+.|.++|.++. +..+.. ++ ...|++||++++++|.++.+++.
T Consensus 405 ~~~~~~d~~~~~~~~~~ll~~GV~v~-p~~~~~-----~s---~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 405 GDVRAADQQLKELFFFHMLRKGIYLA-PRGMYA-----LS---LEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 00 0001234567888888886543 322211 33 44799999999999999877653
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.35 E-value=4.9e-10 Score=114.87 Aligned_cols=328 Identities=12% Similarity=0.040 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842 128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC 205 (499)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~ 205 (499)
++.+.++.+.|++++..+-+ ...|+++|||||..|+..||.....+ |. .+..|+ .....|-...-++
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~a~ 178 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE----GKPQKRKILTRWNAYHGVTAVSA 178 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCcceEEEeeceECCCccccc
Confidence 33445566778888865432 24899999999999999998653322 21 233343 3444565555454
Q ss_pred HHhC--------CCCCCeEEeeCCCC---CC-Ccc-------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842 206 KLAG--------VSPANIRALPTSVD---AN-FSL-------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-- 264 (499)
Q Consensus 206 ~~~G--------~g~~~v~~v~~~~~---~~-~~~-------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-- 264 (499)
...| ........++.... +. ... ..++|++.|.+.. ...+.+|++--.....|.+-|
T Consensus 179 s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~ 256 (473)
T 4e3q_A 179 SMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAK 256 (473)
T ss_dssp HHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCT
T ss_pred cccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCH
Confidence 4433 22223444543210 00 011 1234555554321 223455555554455676633
Q ss_pred --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842 265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP 341 (499)
Q Consensus 265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~ 341 (499)
+++|.++|++||+.|++|+++.|+.....-+.....++. .|.+++. |.++.. +..|.++++++- . +.+....
T Consensus 257 ~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~-PDi~t~~--K~l~gG~~Pl~av~~~~~i-~-~~~~~~~ 331 (473)
T 4e3q_A 257 GYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFT-PDAIISS--KNLTAGFFPMGAVILGPEL-S-KRLETAI 331 (473)
T ss_dssp THHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCC-CSEEEEC--GGGGTTSSCCEEEEECHHH-H-HHHHHHH
T ss_pred HHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCC-CChHHhc--ccccCCCCCcccccccHHH-H-HHhcccc
Confidence 899999999999999999999887443333333334553 7988874 777655 678888887752 1 2221100
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHH---HHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCC
Q 010842 342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVL---RSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPR 415 (499)
Q Consensus 342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l---~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~ 415 (499)
..... +....+.....+...+++ +.+-.++ .+++..++.++|.+.|+++ |.+.-+. -
T Consensus 332 ~~~~~-------------~~hg~T~~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vR-G 394 (473)
T 4e3q_A 332 EAIEE-------------FPHGFTASGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGEYR-G 394 (473)
T ss_dssp HHHSC-------------CCCCCTTTTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEEEE-E
T ss_pred ccccc-------------cccCCCCCCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeEEe-e
Confidence 00000 000111122344444444 4443333 4555666777777777653 4432111 1
Q ss_pred CceEEEEEecCCCCCC-c-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 416 HFALVCFRLNPYPHSG-S-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 416 ~~~~v~f~~~~~~~~~-~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
...++.+.+..+.... . ........++.+.+.++|.++ .+ . | ..+|++.. ...|++|||+++++|.++.+++
T Consensus 395 ~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~--~-g-~~i~l~PP-L~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 395 IGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLIC-RP--L-G-QSVVLCPP-FILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEEC-EE--E-T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEE-Ee--c-C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 1123444443221000 0 011234567888888999543 22 2 2 35888763 5689999999999999999888
Q ss_pred hcc
Q 010842 494 FKG 496 (499)
Q Consensus 494 ~~~ 496 (499)
.++
T Consensus 469 ~ae 471 (473)
T 4e3q_A 469 FAE 471 (473)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.20 E-value=8.1e-10 Score=120.84 Aligned_cols=327 Identities=13% Similarity=0.045 Sum_probs=167.4
Q ss_pred HHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc------cCCeEEE-cCCCCchhHHHH
Q 010842 133 VVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN------MHKLVVY-GSDQTHSTFAKV 204 (499)
Q Consensus 133 ~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g------~~~~~i~-~s~~~H~s~~ka 204 (499)
++.+.|+++++-+ .+ -.+|+++||+||-.|+..|+.+.....+..+ ..+..|+ .....|-+..-+
T Consensus 428 ~Lae~L~~~~p~~~l~-------~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 428 KCAELLLDGVGKGWAS-------RVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp HHHHHHHHTTTTTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred HHHHHHHHhCCCCCCC-------EEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence 3445578877632 11 2489999999999999999533322111100 0233344 455568777777
Q ss_pred HHHhCCCC-------------------------CCeEEeeCCCC------CCC-ccC------------------HHHHH
Q 010842 205 CKLAGVSP-------------------------ANIRALPTSVD------ANF-SLS------------------PQLLR 234 (499)
Q Consensus 205 ~~~~G~g~-------------------------~~v~~v~~~~~------~~~-~~d------------------~~~L~ 234 (499)
+...|... ..+..+++... +.. .-| .++|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 77765310 01112222210 000 001 25677
Q ss_pred HHHHHHH--HcCCccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCce
Q 010842 235 RAVEADV--EAGLVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDS 307 (499)
Q Consensus 235 ~~i~~~~--~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDs 307 (499)
+.|++.. .....+.+|++--. ....|.+-+ +++|.++|++||++|++|.++.|+......+.....|+ ..|.
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi 659 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDI 659 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSE
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcE
Confidence 7765421 11233444444332 355566644 89999999999999999999887643333222222354 3688
Q ss_pred eEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH---hcHH
Q 010842 308 FSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS---YGVL 383 (499)
Q Consensus 308 i~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~g~~ 383 (499)
+|+ -|.++.. ...|+++++++ +.+.+...... ..+....+.....+...+++.. +..+
T Consensus 660 itl--sK~L~gG~~Plgav~~~~~--i~~~~~~~~~~--------------~~~~hg~T~~g~Pla~Aaala~L~~i~~~ 721 (831)
T 4a0g_A 660 ACF--AKLLTGGMVPLAVTLATDA--VFDSFSGDSKL--------------KALLHGHSYSAHAMGCATAAKAIQWFKDP 721 (831)
T ss_dssp EEE--CGGGGTTSSCCEEEEECHH--HHHTTCSSCGG--------------GSCCCCCTTTTCHHHHHHHHHHHHHHHCT
T ss_pred EEE--ecccccCccCcEEEEECHH--HHHHHhccccc--------------ccceeecCCcccHHHHHHHHHHHHHHHhh
Confidence 875 5888654 35788888764 22333221100 0000111222234444444443 3222
Q ss_pred HHHHHHHHH-HHH----HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee
Q 010842 384 NLQSHIRSD-IRL----AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI 458 (499)
Q Consensus 384 g~~~~~~~~-~~~----a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 458 (499)
.+.+.+.+. ..+ .+.+.+.+++.|.+.-+. ....++.+.+..... ..........++.+.+.++|.++ .+.
T Consensus 722 ~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~-~~~~~~~~a~~~~~~l~e~Gv~v-~p~- 797 (831)
T 4a0g_A 722 ETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADAS-NSGYASLYAKSLLIMLREDGIFT-RPL- 797 (831)
T ss_dssp TTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC----------CHHHHHHHHHHHHTTEEC-CCB-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCcc-ccccchHHHHHHHHHHHHCCcEE-Eec-
Confidence 222111110 111 223445566677654432 223445555543210 00000123567888888889543 322
Q ss_pred ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842 459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493 (499)
Q Consensus 459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l 493 (499)
+ ..+|++.. +.+|++||++++++|.++.+++
T Consensus 798 --g-~~lrl~pp-~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 798 --G-NVIYLMCG-PCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp --T-TEEEEECC-TTCCHHHHHHHHHHHHHHHTTT
T ss_pred --C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 2 46999974 7789999999999999887654
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=72.87 E-value=6.6 Score=34.35 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
..+=|..++=.+-.|..|..|++-.-.+..|....++++.++|++||+.++
T Consensus 143 ~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 143 RGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 334566676667789999988888776778999999999999999999875
No 238
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=67.56 E-value=20 Score=31.78 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=54.9
Q ss_pred hhHHHHHHHh-CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHh
Q 010842 199 STFAKVCKLA-GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEY 275 (499)
Q Consensus 199 ~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~ 275 (499)
.+++.++.++ .+|.+.+.+.|.. | .-..++|+..-+.+.++|. .. -|||-| |.+++|.++|.+.
T Consensus 145 V~vetAiaml~dmG~~SvKffPm~--G--l~~l~E~~avAka~a~~g~------~l---EPTGGIdl~N~~~I~~i~l~a 211 (249)
T 3m0z_A 145 VPLETAIALLKDMGGSSIKYFPMG--G--LKHRAEFEAVAKACAAHDF------WL---EPTGGIDLENYSEILKIALDA 211 (249)
T ss_dssp EEHHHHHHHHHHTTCCEEEECCCT--T--TTTHHHHHHHHHHHHHTTC------EE---EEBSSCCTTTHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC--C--cccHHHHHHHHHHHHHcCc------eE---CCCCCccHhhHHHHHHHHHHc
Confidence 4577776653 6677789999985 3 5578999988888888773 11 367888 7899999999999
Q ss_pred CCEEEeeccc
Q 010842 276 GIWVHVDAAY 285 (499)
Q Consensus 276 ~~~lhvD~A~ 285 (499)
|+..++==.|
T Consensus 212 Gv~~viPHIY 221 (249)
T 3m0z_A 212 GVSKIIPHIY 221 (249)
T ss_dssp TCSCBCCBCC
T ss_pred CCCeeccccc
Confidence 9876554344
No 239
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=67.18 E-value=28 Score=31.63 Aligned_cols=69 Identities=12% Similarity=0.051 Sum_probs=44.1
Q ss_pred CeEEEcCCCCchhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 188 KLVVYGSDQTHSTFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 188 ~~~i~~s~~~H~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
+..|++....-....+.+ .-.|. ++..+.+| --|.+++++.+++-.++..++-++|-++|....+.+.+
T Consensus 33 Ga~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~ 104 (255)
T 4g81_D 33 GARVILNDIRATLLAESVDTLTRKGY---DAHGVAFD-----VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVE 104 (255)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhh
Confidence 334444433333344433 33455 88888887 45889999999887776555667888888777665543
No 240
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=65.44 E-value=15 Score=32.19 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecC-CCcccccCChhHHHHHHHHhCCEEE
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
...=|..++=.+-.|..|..|++-.. .+..|.....+++.++|++||+.++
T Consensus 142 ~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 142 PGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 34556777777778999988877772 5578999999999999999999885
No 241
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=62.64 E-value=42 Score=29.88 Aligned_cols=69 Identities=12% Similarity=0.094 Sum_probs=49.6
Q ss_pred CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~ 266 (499)
++..++.....-..+...+.++|+ ++...... +.++++..+.+..++|... |+. +..
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-------~~ee~~~~i~~l~~~G~~v--VVG--~~~--------- 163 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-------TEEDARGQINELKANGTEA--VVG--AGL--------- 163 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-------SHHHHHHHHHHHHHTTCCE--EEE--SHH---------
T ss_pred CcEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCCE--EEC--CHH---------
Confidence 355566666667778888999999 88888764 6678899999888888433 222 111
Q ss_pred HHHHHHHHhCCEE
Q 010842 267 PLAEVANEYGIWV 279 (499)
Q Consensus 267 ~I~~ia~~~~~~l 279 (499)
..++|+++|+.-
T Consensus 164 -~~~~A~~~Gl~~ 175 (225)
T 2pju_A 164 -ITDLAEEAGMTG 175 (225)
T ss_dssp -HHHHHHHTTSEE
T ss_pred -HHHHHHHcCCcE
Confidence 378999999873
No 242
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=58.88 E-value=33 Score=29.79 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=45.2
Q ss_pred CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhH
Q 010842 188 KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEP 267 (499)
Q Consensus 188 ~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~ 267 (499)
+..++.....-..+...+.++|+ ++...... +.++++..+.+..++|... |+. +..
T Consensus 96 kIavvg~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~l~~~G~~v--vVG--~~~---------- 151 (196)
T 2q5c_A 96 ELALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-------SEDEITTLISKVKTENIKI--VVS--GKT---------- 151 (196)
T ss_dssp EEEEEEESSCSSCHHHHHHHHTC---EEEEEEEC-------SGGGHHHHHHHHHHTTCCE--EEE--CHH----------
T ss_pred cEEEEeCcchhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCeE--EEC--CHH----------
Confidence 44555555566678888899999 88887765 3456677777777777433 222 111
Q ss_pred HHHHHHHhCCEE
Q 010842 268 LAEVANEYGIWV 279 (499)
Q Consensus 268 I~~ia~~~~~~l 279 (499)
..++|+++|+.-
T Consensus 152 ~~~~A~~~Gl~~ 163 (196)
T 2q5c_A 152 VTDEAIKQGLYG 163 (196)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHcCCcE
Confidence 377899999863
No 243
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=58.84 E-value=16 Score=32.72 Aligned_cols=73 Identities=18% Similarity=0.269 Sum_probs=53.5
Q ss_pred hHHHHHHHh-CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHhC
Q 010842 200 TFAKVCKLA-GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYG 276 (499)
Q Consensus 200 s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~ 276 (499)
+++.++.++ .+|.+.+.+.|.. | .-..++|+..-+.+.++|. .. -|||-| |.+++|.++|.+.|
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~--G--l~~leEl~avAkAca~~g~------~l---EPTGGIdl~Nf~~I~~i~l~aG 235 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMK--G--LAHEEEYRAVAKACAEEGF------AL---EPTGGIDKENFETIVRIALEAN 235 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCT--T--TTTHHHHHHHHHHHHHHTC------EE---EEBSSCCTTTHHHHHHHHHHTT
T ss_pred eHHHHHHHHHHcCCCeeeEeecC--C--cccHHHHHHHHHHHHHcCc------eE---CCCCCccHhHHHHHHHHHHHcC
Confidence 577776653 5566688999985 3 5578999988888888773 11 367888 78999999999999
Q ss_pred CEEEeeccc
Q 010842 277 IWVHVDAAY 285 (499)
Q Consensus 277 ~~lhvD~A~ 285 (499)
+..++==.|
T Consensus 236 v~~viPHIY 244 (275)
T 3m6y_A 236 VEQVIPHVY 244 (275)
T ss_dssp CSCBCCEEC
T ss_pred CCeeccccc
Confidence 876544334
No 244
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=57.71 E-value=22 Score=31.44 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
...=|..++=.+-.|..|..|++-.- +..|.....+++.++|++||+.++
T Consensus 151 ~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 151 GGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 34456667666778999988877765 467999999999999999999875
No 245
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=57.05 E-value=41 Score=30.92 Aligned_cols=68 Identities=15% Similarity=0.058 Sum_probs=44.5
Q ss_pred EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh
Q 010842 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV 265 (499)
Q Consensus 190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l 265 (499)
.|++..-.--...+.++-+|- ++..+.+| --|.+++++.+++-.++--++-++|-++|....+.+.++
T Consensus 55 ~V~i~~r~~~~l~~~~~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~ 122 (273)
T 4fgs_A 55 RVFITGRRKDVLDAAIAEIGG---GAVGIQAD-----SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV 122 (273)
T ss_dssp EEEEEESCHHHHHHHHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSC
T ss_pred EEEEEECCHHHHHHHHHHcCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhc
Confidence 344333333456677777776 78888887 448888888887765443345567788887776666443
No 246
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=55.18 E-value=25 Score=31.22 Aligned_cols=51 Identities=12% Similarity=-0.007 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
..+=|..++=.+-+|..|..|++-.-+ ..|.....+++.++|++||+.++.
T Consensus 162 ~GHTEaaVdLarlAGl~Pa~VicEi~~-ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 162 QGHTEMTVALAELANLVPITTICEMMG-DDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSHHHHHHHHHHHTTSCSEEEEEEEBC-TTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCchHHHHHHHHHcCCCceEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEEE
Confidence 335566666667789999888877764 569999999999999999998853
No 247
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=53.78 E-value=45 Score=25.70 Aligned_cols=72 Identities=10% Similarity=0.109 Sum_probs=46.0
Q ss_pred CCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 187 HKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 187 ~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
.+.+||....+.+| ....+.-+|+ ....+.++.. -|..++++.+.+.......|.+.+ . ....|..|+
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~~~~~dvd~~----~~~~~~~~~l~~~~g~~tvP~vfi--~-g~~igG~d~ 86 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGV---ECNVLELDQV----DDGARVQEVLSEITNQKTVPNIFV--N-KVHVGGCDQ 86 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTC---CCEEEETTTS----TTHHHHHHHHHHHHSCCSSCEEEE--T-TEEEESHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCC---CcEEEEecCC----CChHHHHHHHHHHhCCCccCEEEE--C-CEEEeCHHH
Confidence 57788877767666 4455666788 8888888742 256677777766555555675433 3 345666666
Q ss_pred hhHH
Q 010842 265 VEPL 268 (499)
Q Consensus 265 l~~I 268 (499)
+.++
T Consensus 87 l~~l 90 (114)
T 3h8q_A 87 TFQA 90 (114)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 248
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=53.45 E-value=14 Score=34.76 Aligned_cols=63 Identities=21% Similarity=0.131 Sum_probs=45.3
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEee
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHVD 282 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhvD 282 (499)
-|.++++ .+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++-
T Consensus 18 TPf~~dg--~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 83 (309)
T 3fkr_A 18 TTFADTG--DLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVT 83 (309)
T ss_dssp CCBCTTS--SBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCcCC--CcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4555544 9999999999998888887666666666666666667777777777664 4666553
No 249
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=53.08 E-value=16 Score=34.34 Aligned_cols=61 Identities=26% Similarity=0.163 Sum_probs=40.0
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. ++++++
T Consensus 26 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 26 PFSGD--GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44444 48999999999988887776555555555555554556666666666553 466666
No 250
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=52.77 E-value=1.2e+02 Score=27.36 Aligned_cols=78 Identities=13% Similarity=0.164 Sum_probs=52.3
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc--cccCChhHHHHHHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST--TAVDNVEPLAEVANE 274 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~--G~id~l~~I~~ia~~ 274 (499)
..-.+.+.|+-+|+ ..+.|.. |...|+.++..+.|+...+.|..+ ..-.|.-.. ....+.+++.+.+++
T Consensus 86 ~~~~yl~~~k~lGf---~~iEiS~---G~i~l~~~~~~~~I~~~~~~G~~v---~~EvG~k~~~~~~~~~~~~~I~~~~~ 156 (251)
T 1qwg_A 86 KFDEFLNECEKLGF---EAVEISD---GSSDISLEERNNAIKRAKDNGFMV---LTEVGKKMPDKDKQLTIDDRIKLINF 156 (251)
T ss_dssp CHHHHHHHHHHHTC---CEEEECC---SSSCCCHHHHHHHHHHHHHTTCEE---EEEECCSSHHHHTTCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCC---CEEEECC---CcccCCHHHHHHHHHHHHHCCCEE---eeeccccCCcccCCCCHHHHHHHHHH
Confidence 34456788899999 8888863 456899999999999988888544 333344322 344566777776654
Q ss_pred ---hCCEEEeec
Q 010842 275 ---YGIWVHVDA 283 (499)
Q Consensus 275 ---~~~~lhvD~ 283 (499)
.|+|.++=.
T Consensus 157 ~LeAGA~~ViiE 168 (251)
T 1qwg_A 157 DLDAGADYVIIE 168 (251)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHCCCcEEEEe
Confidence 477654433
No 251
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=52.04 E-value=16 Score=34.48 Aligned_cols=61 Identities=16% Similarity=0.130 Sum_probs=44.0
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 19 Pf~~d--g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDD--GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 44544 49999999999999888886666666666665555556667777777665 577776
No 252
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=50.70 E-value=18 Score=33.89 Aligned_cols=61 Identities=21% Similarity=0.330 Sum_probs=39.7
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|..-+++..|.|..++=+.+.-.++.+.+.+. .+++++
T Consensus 22 PF~~d--g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 22 PFDQQ--QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp CBCTT--SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999999988888776555555555554444445566666666553 467665
No 253
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=50.21 E-value=20 Score=33.67 Aligned_cols=61 Identities=21% Similarity=0.164 Sum_probs=38.8
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 27 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 27 PFTES--GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 44444 48999999999988888775555555555554444445556666666553 366654
No 254
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=50.12 E-value=17 Score=34.05 Aligned_cols=61 Identities=21% Similarity=0.253 Sum_probs=38.7
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 18 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQD--GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999998888777775555555555555444555556666666553 366665
No 255
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=50.11 E-value=19 Score=33.53 Aligned_cols=61 Identities=11% Similarity=0.206 Sum_probs=41.0
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHH-cCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVE-AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+ .|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 14 Pf~~d--g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 14 SFNED--GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44444 49999999999998888 776655555555555555556666676766553 466654
No 256
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=47.70 E-value=17 Score=34.32 Aligned_cols=61 Identities=18% Similarity=0.167 Sum_probs=40.3
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|..++=..+.-.++.+.+.+. .+++++
T Consensus 34 Pf~~d--g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQ--GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999999988877776555555555555555556666676666553 366665
No 257
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=47.47 E-value=17 Score=33.82 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=39.7
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 12 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKD--GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44544 48999999999988877776555555555555444556666677666553 366665
No 258
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=47.39 E-value=20 Score=33.65 Aligned_cols=61 Identities=13% Similarity=0.134 Sum_probs=36.7
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 23 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 23 PFDIN--GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp CBCTT--SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 44444 48999999998888777775554444444444444445555666665543 355554
No 259
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.91 E-value=20 Score=34.13 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=38.0
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|..-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 45 PF~~d--g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEA--GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTT--CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999998888777775554444454544444445556666665553 366665
No 260
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=46.47 E-value=23 Score=34.07 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=40.4
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 69 TPF~~d--g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 69 TPYLPD--GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CCBCTT--SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CcCCCC--CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 344544 48999999999988888776555555555555555555556666665543 467665
No 261
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=46.06 E-value=8.6 Score=38.57 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=28.0
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.++..|..++++++++-||++||.|++|.++
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3567899999999999999999999999874
No 262
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=44.87 E-value=23 Score=33.90 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=38.3
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
-|.++++ .+|.+.+++.++...+.|..-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 41 TPF~~dg--~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 41 TIFTADG--QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp CCBCTTS--SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCC--CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3555444 8888888888888777775555555555555444445556666665543 355554
No 263
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=44.84 E-value=20 Score=33.72 Aligned_cols=61 Identities=7% Similarity=-0.027 Sum_probs=39.7
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.++++ .+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. ++++++
T Consensus 25 Pf~~dg--~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATA--EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTS--CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCC--CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 445444 8888888888888777775555555555555555556666777776664 466655
No 264
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=44.27 E-value=98 Score=27.87 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=35.5
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN 264 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~ 264 (499)
.....+.+..+|. ++..+.+| --|.+++++.+++-.+....+-++|-++|....+.+.+
T Consensus 61 ~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~ 119 (266)
T 3grp_A 61 EDKLKEIAADLGK---DVFVFSAN-----LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVR 119 (266)
T ss_dssp HHHHHHHHHHHCS---SEEEEECC-----TTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CC
T ss_pred HHHHHHHHHHhCC---ceEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 3445555666676 88888887 34788888887765443234556788887766555433
No 265
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=43.55 E-value=38 Score=30.12 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHcCCccEEEEEecCCCc----------ccccCChhHHHHHHHHhCCEEEe
Q 010842 231 QLLRRAVEADVEAGLVPLFLCATVGTTS----------TTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 231 ~~L~~~i~~~~~~g~~p~~vv~t~gtt~----------~G~id~l~~I~~ia~~~~~~lhv 281 (499)
.+=|..++-.+-.|..|..|++-.-+-. .|.....+++.++|++||+.++.
T Consensus 152 GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 152 GHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp SHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3446667666778888988777665321 69999999999999999998853
No 266
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=43.25 E-value=18 Score=34.07 Aligned_cols=56 Identities=13% Similarity=0.042 Sum_probs=35.1
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|-.-+++..+.|...+=..+.-.++.+.+.+. .+++++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 47888888888877777775555555555555555555556666666554 355554
No 267
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=43.00 E-value=26 Score=33.48 Aligned_cols=56 Identities=18% Similarity=0.131 Sum_probs=33.5
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
+.+|.+.+++.++...+.|..-+++..+.|...+=..+.-.++.+.+-.-.+++++
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 48888888888888777775555555555544444444455555552233455554
No 268
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=41.89 E-value=18 Score=34.23 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=42.4
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 35 Pf~~d--g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAAD--GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTT--SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 49999999999999888886665555555555555556666777776654 466665
No 269
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=41.89 E-value=21 Score=33.26 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=37.6
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+.
T Consensus 14 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTD--GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTT--SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 44444 49999999999998888876555555555555555556666777776664
No 270
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=40.98 E-value=18 Score=34.10 Aligned_cols=61 Identities=16% Similarity=0.170 Sum_probs=40.1
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 33 Pf~~d--g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDN--GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999999988888776555555555555555556666677666554 466655
No 271
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=40.94 E-value=98 Score=27.44 Aligned_cols=65 Identities=14% Similarity=-0.004 Sum_probs=40.1
Q ss_pred EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.|++.........+.+..+|. ++..+.+| --|.+++++.+++-.+.-..+-+++-++|....+.+
T Consensus 32 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 32 TVIVSDINAEGAKAAAASIGK---KARAIAAD-----ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAW 96 (247)
T ss_dssp EEEEECSCHHHHHHHHHHHCT---TEEECCCC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred EEEEEeCCHHHHHHHHHHhCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 344333333445556666666 88888887 347888888887654432234567778877665554
No 272
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.65 E-value=20 Score=33.37 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=37.6
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|..++=..+.-.++.+.+.+. .+++++
T Consensus 12 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 12 PMDEK--GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 48999999999888777775554444554544444445556666665543 355554
No 273
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=39.69 E-value=1.9e+02 Score=26.32 Aligned_cols=148 Identities=13% Similarity=0.151 Sum_probs=83.0
Q ss_pred CCcccccc--CCCCCChHHHHHHHHHHHc---ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh
Q 010842 88 LSPNFFAF--FPATVSTAGFLGEMLCACF---NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT 162 (499)
Q Consensus 88 ~~p~~~~~--~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg 162 (499)
..||-.|- +-.....+..+.|++..+- +---..|..+.....+++.+. +++-.|. .+..||
T Consensus 35 ~KPR~~GlT~v~Dkglg~~~~~DlLe~ag~yID~lKfg~GTs~l~~~l~ekI~--l~~~~gV------------~v~~GG 100 (276)
T 1u83_A 35 NKPRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTSLLTKDLEEKIS--TLKEHDI------------TFFFGG 100 (276)
T ss_dssp CSSCSSSCEEEEESSCCHHHHHHHHHHHGGGCCEEEECTTGGGGCTTHHHHHH--HHHHTTC------------EEEECH
T ss_pred CCCcccCceEEecCCCCHHHHHHHHHHhhhhcceEEecCcchhhhHHHHHHHH--HHHHcCC------------eEeCCc
Confidence 46666662 2333456777788776532 222234555555555555543 5555544 566677
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842 163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242 (499)
Q Consensus 163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 242 (499)
|-. ..+. .....-.+.+.|+-+|+ ..+.|.. |...|+.++..+.|++...
T Consensus 101 Tlf--E~~l----------------------~qg~~~~yl~~~k~lGF---~~IEISd---Gti~l~~~~~~~lI~~a~~ 150 (276)
T 1u83_A 101 TLF--EKYV----------------------SQKKVNEFHRYCTYFGC---EYIEISN---GTLPMTNKEKAAYIADFSD 150 (276)
T ss_dssp HHH--HHHH----------------------HTTCHHHHHHHHHHTTC---SEEEECC---SSSCCCHHHHHHHHHHHTT
T ss_pred HHH--HHHH----------------------HcCcHHHHHHHHHHcCC---CEEEECC---CcccCCHHHHHHHHHHHHh
Confidence 732 1111 11134456788899999 8888863 4568999999999986543
Q ss_pred cCCccEEEEEecCCCcc--cccCChhHHHHHHHH---hCCEEE-eec
Q 010842 243 AGLVPLFLCATVGTTST--TAVDNVEPLAEVANE---YGIWVH-VDA 283 (499)
Q Consensus 243 ~g~~p~~vv~t~gtt~~--G~id~l~~I~~ia~~---~~~~lh-vD~ 283 (499)
. +-|..-.|.-.. ....+.+++.+.+++ .|+|.+ +++
T Consensus 151 ~----f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 193 (276)
T 1u83_A 151 E----FLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA 193 (276)
T ss_dssp T----SEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred h----cEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 2 445555555322 334455666665554 587654 444
No 274
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=39.59 E-value=13 Score=37.15 Aligned_cols=30 Identities=10% Similarity=0.081 Sum_probs=26.9
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 58 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 58 QSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 456899999999999999999999999875
No 275
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.11 E-value=1.2e+02 Score=27.44 Aligned_cols=57 Identities=16% Similarity=0.039 Sum_probs=37.3
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.....+.+..+|- ++..+++| --|.+.+++.+++-.+....+-+++-++|....+.+
T Consensus 61 ~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 61 EDAAVRVANEIGS---KAFGVRVD-----VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp HHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred HHHHHHHHHHhCC---ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 3445555555666 78888887 347888888887654432235577888886665554
No 276
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.37 E-value=1.1e+02 Score=27.70 Aligned_cols=57 Identities=18% Similarity=0.017 Sum_probs=36.9
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.....+.+..+|. ++..+.+| --|.+.+++.+++..+.-..+-+++-++|....+.+
T Consensus 63 ~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 63 GDAADAAATKIGC---GAAACRVD-----VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp HHHHHHHHHHHCS---SCEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred HHHHHHHHHHcCC---cceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 3445555666666 78888887 347888888887654432345567778877655544
No 277
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=38.14 E-value=22 Score=33.65 Aligned_cols=56 Identities=14% Similarity=0.039 Sum_probs=38.9
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 48999999999888887776665666666665555556666777766654 466665
No 278
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=38.08 E-value=19 Score=33.48 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=35.9
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
|.+++ +.+|.+.+++.++...+.|..-+++..|.|...+=..+.-.++.+.+.+.
T Consensus 10 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQ--GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 44544 49999999999998888875555444444444444445556666666554
No 279
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=37.65 E-value=20 Score=33.85 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=10.5
Q ss_pred ccCHHHHHHHHHHHHHcCC
Q 010842 227 SLSPQLLRRAVEADVEAGL 245 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~ 245 (499)
.+|.+.+++.++...+.|-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv 47 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGI 47 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 5555555555555554443
No 280
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=37.63 E-value=23 Score=33.02 Aligned_cols=55 Identities=16% Similarity=0.213 Sum_probs=36.0
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+.
T Consensus 10 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKD--NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTT--SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 44544 49999999999998888775554444444444444445556666666654
No 281
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=36.35 E-value=28 Score=32.27 Aligned_cols=55 Identities=15% Similarity=0.174 Sum_probs=32.4
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.+|.+.+++.++...+.|-.-+++..|.|..++=..+.-.++.+.+.+. .+++++
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 7888888888877777665544444444444444445555555555443 355554
No 282
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=36.09 E-value=17 Score=36.63 Aligned_cols=30 Identities=10% Similarity=0.010 Sum_probs=26.9
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 456789999999999999999999999875
No 283
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=35.88 E-value=25 Score=33.17 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=33.6
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|..-+++..|.|..++=+.+.-.++.+.+.+. .+++++
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 48888888888888777775444333444444443444555666655543 466665
No 284
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=35.88 E-value=17 Score=36.04 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=26.0
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.+..|..++++++++-||++|+.+++|.++
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 455788899999999999999999999875
No 285
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=35.84 E-value=17 Score=36.54 Aligned_cols=31 Identities=16% Similarity=0.009 Sum_probs=27.2
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
....|..++++++++-||++|+.|++|.++-
T Consensus 74 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 74 RTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4457889999999999999999999998753
No 286
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=35.34 E-value=1.5e+02 Score=26.41 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=38.2
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
......+.+..++- ++..+.+| --|.+++++.+++-.+....+-+|+-++|....+.+
T Consensus 41 ~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 41 DIERARQAAAEIGP---AAYAVQMD-----VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp CHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred CHHHHHHHHHHhCC---CceEEEee-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 33445555666665 78888887 348888888887765543345577888876655544
No 287
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=35.11 E-value=18 Score=36.85 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=26.8
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445799999999999999999999999875
No 288
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=35.06 E-value=17 Score=36.10 Aligned_cols=30 Identities=17% Similarity=0.194 Sum_probs=23.6
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 63 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 63 KAEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 445677888888888888888888888764
No 289
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=34.63 E-value=18 Score=36.37 Aligned_cols=30 Identities=17% Similarity=0.118 Sum_probs=27.0
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 456899999999999999999999999875
No 290
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=34.46 E-value=26 Score=32.81 Aligned_cols=56 Identities=20% Similarity=0.228 Sum_probs=37.7
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh----CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY----GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~----~~~lhv 281 (499)
+.+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 48999999999988888775555544555554444445566666666554 477766
No 291
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=34.28 E-value=36 Score=24.53 Aligned_cols=48 Identities=8% Similarity=0.019 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCC-EEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGR-VYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~-~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...+++.++|...|. ..+. .+..+.|+-++ |..++++.+.+.+.|++.
T Consensus 21 ~~A~~l~~~L~~~G~~a~i~----~~~~~yRV~vG-pf~s~~~A~~~~~~L~~~ 69 (81)
T 1uta_A 21 EQAETVRAQLAFEGFDSKIT----TNNGWNRVVIG-PVKGKENADSTLNRLKMA 69 (81)
T ss_dssp HHHHHHHHHHHHHTCCEEEE----ECSSSEEEEES-SCBTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEE----eCCcEEEEEEC-CcCCHHHHHHHHHHHHHc
Confidence 345677788877784 2332 23456788775 889999999999988873
No 292
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=34.15 E-value=18 Score=36.94 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=22.5
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
...|..++++++++-||++|+.|++|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5568888888888888888888888865
No 293
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=33.77 E-value=2.3e+02 Score=25.43 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=30.8
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+.+++.+++-.+....+-+++-++|....+.+
T Consensus 76 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 119 (271)
T 4ibo_A 76 DAEAVAFD-----VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPM 119 (271)
T ss_dssp CEEECCCC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 78888877 348888888888765544455678888876655544
No 294
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=33.63 E-value=2.2e+02 Score=24.84 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=34.0
Q ss_pred HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
..|. ++..+.+| --|.+.+++.+++-.+....+-+|+-++|....+.+
T Consensus 51 ~~~~---~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 98 (247)
T 3lyl_A 51 EKGF---KARGLVLN-----ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLM 98 (247)
T ss_dssp HTTC---CEEEEECC-----TTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCG
T ss_pred hcCC---ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence 3466 78888887 348889999888766554456678888877655544
No 295
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=33.51 E-value=92 Score=24.63 Aligned_cols=72 Identities=13% Similarity=0.054 Sum_probs=40.5
Q ss_pred CCeEEEcCCCCchhH---HHHHHHhC---CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 187 HKLVVYGSDQTHSTF---AKVCKLAG---VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 187 ~~~~i~~s~~~H~s~---~ka~~~~G---~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
.+.++|....+.++- ...+...| + .+..++++.+. +-.++++.+.+.......|.+ ..-|. ..|
T Consensus 37 ~~Vvvy~~~~Cp~C~~a~k~~L~~~~~~~i---~~~~vdvd~~~----~~~~~~~~L~~~~g~~tVP~v--fi~g~-~ig 106 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCKATLSTLFQELNVPKS---KALVLELDEMS----NGSEIQDALEEISGQKTVPNV--YINGK-HIG 106 (129)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHTTSCCCGG---GEEEEEGGGST----THHHHHHHHHHHHSCCSSCEE--EETTE-EEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHhcCccCC---CcEEEEccccC----CHHHHHHHHHHHhCCCCCCEE--EECCE-EEc
Confidence 467888777776663 33344455 5 67778876432 334556666655544456753 33333 455
Q ss_pred ccCChhHH
Q 010842 261 AVDNVEPL 268 (499)
Q Consensus 261 ~id~l~~I 268 (499)
..|++.++
T Consensus 107 G~d~l~~l 114 (129)
T 3ctg_A 107 GNSDLETL 114 (129)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 55555443
No 296
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=33.32 E-value=19 Score=36.19 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=26.5
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++|+.|++|.++
T Consensus 90 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 90 LNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3456788899999999999999999999765
No 297
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.12 E-value=19 Score=33.67 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=40.1
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
|.+++ +.+|.+.+++.++...+.|-.-+++..|.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 15 Pf~~d--g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 15 PVDAE--GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CBCTT--SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45554 48999999999998888776555555555554444555566677666554 356655
No 298
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=33.02 E-value=19 Score=35.84 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=24.1
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.+++|.++
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 345677888888888888899999888764
No 299
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=32.72 E-value=32 Score=32.04 Aligned_cols=56 Identities=23% Similarity=0.306 Sum_probs=33.0
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|..-+++..|.|..++=..+.-.++.+.+.+. .+++++
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 38888888888887777665444444444444444444555566655543 356554
No 300
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=32.51 E-value=1.8e+02 Score=25.73 Aligned_cols=45 Identities=20% Similarity=0.178 Sum_probs=30.2
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.++..+++|- -|.+.+++.+++..+....+-+|+.++|....+.+
T Consensus 73 ~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~ 117 (266)
T 3o38_A 73 GRVEAVVCDV-----TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV 117 (266)
T ss_dssp SCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred CceEEEEeCC-----CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCc
Confidence 3788888873 47888888887655443345577778876655544
No 301
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=32.43 E-value=19 Score=35.25 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.0
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
...|..++++++++-||++|+.+++|.++.
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 456888899999999999999999997653
No 302
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=32.11 E-value=1.2e+02 Score=27.10 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=36.3
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.....+....+|. ++..+.+| --|.+.+++.++.-.+....+-+++-++|....+.+
T Consensus 42 ~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (255)
T 4eso_A 42 ESNIARIREEFGP---RVHALRSD-----IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF 98 (255)
T ss_dssp HHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred HHHHHHHHHHhCC---cceEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 3445555556666 78888887 347888888777654432345567777776655544
No 303
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=31.63 E-value=2.8e+02 Score=25.05 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=54.0
Q ss_pred EEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec--C-CCcccccCChhH
Q 010842 191 VYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV--G-TTSTTAVDNVEP 267 (499)
Q Consensus 191 i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~--g-tt~~G~id~l~~ 267 (499)
|=.....+..+.+.+.-.|. ++.+.... ..+++++..+++.-...|..-+.++--. . ++..=..-+|..
T Consensus 112 Iga~~~~n~~ll~~~a~~~k----PV~lk~G~----~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~a 183 (262)
T 1zco_A 112 IGARNSQNFELLKEVGKVEN----PVLLKRGM----GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISA 183 (262)
T ss_dssp ECGGGTTCHHHHHHHTTSSS----CEEEECCT----TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTH
T ss_pred ECcccccCHHHHHHHHhcCC----cEEEecCC----CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHH
Confidence 33334445554444333444 55555431 3489999999987776665444443311 1 122112236778
Q ss_pred HHHHHHHhCCEEEeeccccchh
Q 010842 268 LAEVANEYGIWVHVDAAYAGSA 289 (499)
Q Consensus 268 I~~ia~~~~~~lhvD~A~g~~~ 289 (499)
|..+.+..++++++|..|+.+.
T Consensus 184 i~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 184 VPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp HHHHHHHBSSCEEECSSTTTCS
T ss_pred HHHHHhhhCCCEEEEcCCCCCc
Confidence 8888777799999999998663
No 304
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.35 E-value=20 Score=36.42 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=26.0
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++||.|+.|.++
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3456788899999999999999999999875
No 305
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=31.01 E-value=1.1e+02 Score=26.93 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=32.7
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
....+....++- .+..+.+|- -|.+++++.+++-.+....+-+++-++|....+.+
T Consensus 38 ~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 93 (235)
T 3l6e_A 38 QRLQQQELLLGN---AVIGIVADL-----AHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPV 93 (235)
T ss_dssp HHHHHHHHHHGG---GEEEEECCT-----TSHHHHHHHHHHHHHHHCSCSEEEEECCCC-----
T ss_pred HHHHHHHHHhcC---CceEEECCC-----CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCh
Confidence 345555555554 678888773 47888888887654432344567788877655544
No 306
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=30.79 E-value=21 Score=35.97 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=23.8
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445678888888888888888888888764
No 307
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.78 E-value=1.5e+02 Score=26.71 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=29.4
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+++++.+++-.+....+-++|-++|....+.+
T Consensus 54 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 54 TALAQVLD-----VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL 97 (264)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 77888876 347888888877654432345567788877665544
No 308
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=30.47 E-value=21 Score=35.19 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=26.9
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.....|..++++++++-||++|+.+++|.++-
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34567889999999999999999999998753
No 309
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=30.41 E-value=2.5e+02 Score=27.11 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=52.3
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc----ccCChhHHHHHHH
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT----AVDNVEPLAEVAN 273 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G----~id~l~~I~~ia~ 273 (499)
++.+.+.+.-.|. ++.+.... ..++++++.+++.-...|...+ +++-.|++.+- ..-++..|..+.+
T Consensus 238 n~~LL~~~a~~gk----PVilk~G~----~~t~~e~~~Ave~i~~~Gn~~i-~L~~rG~s~yp~~~~~~ldl~~i~~lk~ 308 (385)
T 3nvt_A 238 NFELLKAAGRVDK----PILLKRGL----SATIEEFIGAAEYIMSQGNGKI-ILCERGIRTYEKATRNTLDISAVPILKK 308 (385)
T ss_dssp CHHHHHHHHTSSS----CEEEECCT----TCCHHHHHHHHHHHHTTTCCCE-EEEECCBCCSCCSSSSBCCTTHHHHHHH
T ss_pred CHHHHHHHHccCC----cEEEecCC----CCCHHHHHHHHHHHHHcCCCeE-EEEECCCCCCCCCCccccCHHHHHHHHH
Confidence 4444444443333 55555421 2699999999988777776553 33333333221 1247888988888
Q ss_pred HhCCEEEeeccccch
Q 010842 274 EYGIWVHVDAAYAGS 288 (499)
Q Consensus 274 ~~~~~lhvD~A~g~~ 288 (499)
..++++++|..|+++
T Consensus 309 ~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 309 ETHLPVMVDVTHSTG 323 (385)
T ss_dssp HBSSCEEEEHHHHHC
T ss_pred hcCCCEEEcCCCCCC
Confidence 899999999999864
No 310
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=29.89 E-value=20 Score=35.81 Aligned_cols=27 Identities=26% Similarity=0.313 Sum_probs=14.9
Q ss_pred cccccCChhHHHHHHHHhCCEEEeecc
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
..|..++++++++-||++|+.|++|.+
T Consensus 92 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345555555555555555555555543
No 311
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=29.34 E-value=1.6e+02 Score=21.05 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=41.8
Q ss_pred cCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHH---HHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 186 MHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQL---LRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 186 ~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~---L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
..+.++|....+.++ +...+..+|+ ....++++. .+.+. +...+.+.......|.+++ -+....|
T Consensus 11 M~~v~ly~~~~Cp~C~~~~~~L~~~gi---~~~~~~v~~-----~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~i~G 80 (92)
T 3ic4_A 11 MAEVLMYGLSTCPHCKRTLEFLKREGV---DFEVIWIDK-----LEGEERKKVIEKVHSISGSYSVPVVVK--GDKHVLG 80 (92)
T ss_dssp CSSSEEEECTTCHHHHHHHHHHHHHTC---CCEEEEGGG-----CCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEEEES
T ss_pred CceEEEEECCCChHHHHHHHHHHHcCC---CcEEEEeee-----CCccchHHHHHHHHHhcCCCCcCEEEE--CCEEEeC
Confidence 346788877777766 4455677788 888888763 23322 2233333333456786554 4433333
Q ss_pred ccCChhHHHHH
Q 010842 261 AVDNVEPLAEV 271 (499)
Q Consensus 261 ~id~l~~I~~i 271 (499)
. +-++|.++
T Consensus 81 -~-~~~~l~~~ 89 (92)
T 3ic4_A 81 -Y-NEEKLKEL 89 (92)
T ss_dssp -C-CHHHHHHH
T ss_pred -C-CHHHHHHH
Confidence 3 45666554
No 312
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=29.29 E-value=2.9e+02 Score=24.20 Aligned_cols=55 Identities=9% Similarity=-0.125 Sum_probs=33.5
Q ss_pred hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
...+....+|- ++..+.+| --|.+++++.++...+....+-+|+-++|....+.+
T Consensus 42 ~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 96 (253)
T 1hxh_A 42 AGQQLAAELGE---RSMFVRHD-----VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM 96 (253)
T ss_dssp HHHHHHHHHCT---TEEEECCC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred HHHHHHHHcCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 34444444555 78888876 347888888887654332234467777776554443
No 313
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=28.78 E-value=53 Score=23.36 Aligned_cols=48 Identities=6% Similarity=-0.006 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCC-EEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842 437 MLNRKLLDWVNSTGR-VYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG 489 (499)
Q Consensus 437 ~~~~~l~~~l~~~g~-~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~ 489 (499)
...+.+.++|...|. .++. .+..+.|+-++ |..++++.+.+++.|++.
T Consensus 21 ~~A~~~~~~L~~~g~~~~i~----~~~~~yRV~vG-pf~~~~~A~~~~~~L~~~ 69 (79)
T 1x60_A 21 ANADSLASNAEAKGFDSIVL----LKDGLYKVQIG-AFSSKDNADTLAARAKNA 69 (79)
T ss_dssp HHHHHHHHHHHHHTCCEEEE----EETTEEEEEEE-EESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEe----cCCcEEEEEEC-CcCCHHHHHHHHHHHHHc
Confidence 345677777777774 2332 12245677775 888999999999998873
No 314
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=28.75 E-value=15 Score=34.13 Aligned_cols=60 Identities=12% Similarity=0.037 Sum_probs=35.6
Q ss_pred eeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842 218 LPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV 281 (499)
Q Consensus 218 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv 281 (499)
-|.++++ .+|.+.+++.++...+. -.-+++..|.|...+=+.+.-.++.+.+.+ .+++++
T Consensus 8 TPf~~dg--~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 8 TPFDREG--RLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp CCBCTTC--CBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCCCCC--CcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 3555544 89999999999876654 333444444444444444555566665555 666654
No 315
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.73 E-value=2.1e+02 Score=25.30 Aligned_cols=43 Identities=12% Similarity=-0.006 Sum_probs=30.5
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+++| --|.+++++.++.-.+. ..+-+++-++|....+.+
T Consensus 57 ~~~~~~~D-----v~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 57 RIVARSLD-----ARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred eEEEEECc-----CCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence 78888887 34788888888776555 456677888876655544
No 316
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=28.66 E-value=31 Score=32.00 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=33.1
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY 275 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~ 275 (499)
+.+|.+.+++.++...+.|..-+++..|.|..++=+.+.-.++.+.+.+.
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 38999999999988887775554444444444444445566666666654
No 317
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=28.63 E-value=20 Score=36.03 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=26.1
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
......|..++++++++-||++|+.|++|.++
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34456788888999999999999999999765
No 318
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=28.47 E-value=23 Score=36.61 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=22.8
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
+...|..++++++++-||++||.|++|.++.
T Consensus 216 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 216 DPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 4456777778888888888888888887653
No 319
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=28.43 E-value=20 Score=35.89 Aligned_cols=30 Identities=20% Similarity=0.291 Sum_probs=26.7
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.+++|.++
T Consensus 68 dp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 68 NTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345789999999999999999999999764
No 320
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=28.42 E-value=2.7e+02 Score=24.56 Aligned_cols=44 Identities=9% Similarity=-0.065 Sum_probs=28.5
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+++++.+++-.+....+-+++-++|....+.+
T Consensus 56 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 99 (257)
T 3imf_A 56 QILTVQMD-----VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPA 99 (257)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888887 347888888887654432234567777775544443
No 321
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=28.15 E-value=3.1e+02 Score=24.62 Aligned_cols=44 Identities=9% Similarity=0.050 Sum_probs=30.4
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.+..+++| --|.+++++.+++-.+.-..+-+++-++|....+.+
T Consensus 77 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 120 (281)
T 3v2h_A 77 TVLHHPAD-----MTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKI 120 (281)
T ss_dssp CEEEECCC-----TTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCG
T ss_pred cEEEEeCC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 78888877 347888888887755443345567788877665554
No 322
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=27.78 E-value=1.8e+02 Score=26.12 Aligned_cols=52 Identities=21% Similarity=0.175 Sum_probs=33.6
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
-....+.+..++- ++..+.+| --|.+++++.+++-.+....+-++|-++|..
T Consensus 62 ~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 62 LDALQETAAEIGD---DALCVPTD-----VTDPDSVRALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp HHHHHHHHHHHTS---CCEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3445566666665 78888887 3478888888876544322345677777764
No 323
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.64 E-value=1.8e+02 Score=26.23 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=29.8
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+++++.+++-.+.-..+-+++-++|....+.+
T Consensus 74 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 117 (279)
T 3sju_A 74 DVDGSSCD-----VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET 117 (279)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 78888887 347888888887654432244567788877655544
No 324
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=27.45 E-value=35 Score=31.99 Aligned_cols=56 Identities=29% Similarity=0.262 Sum_probs=36.8
Q ss_pred CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
+.+|.+.+++.++...+.|..-+++..|.|..++=+.+.-.++.+.+.+. .+++++
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 38999999999988887775555555555555555555566666666553 356554
No 325
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=27.40 E-value=23 Score=35.62 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=17.4
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
...|..++++++++-||++|+.|++|.+
T Consensus 97 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 97 PMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455666666666666666666666654
No 326
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=27.11 E-value=1.7e+02 Score=25.87 Aligned_cols=56 Identities=14% Similarity=0.112 Sum_probs=35.0
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
....+....++- ....+.+| --|.+++++.+++-.+....+-+++-++|....+.+
T Consensus 44 ~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 99 (248)
T 3op4_A 44 SGAQAISDYLGD---NGKGMALN-----VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLL 99 (248)
T ss_dssp HHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred HHHHHHHHHhcc---cceEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 345555555655 67777776 347888888887654432234467777776655544
No 327
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.95 E-value=26 Score=36.10 Aligned_cols=28 Identities=7% Similarity=0.229 Sum_probs=17.0
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
...|..++++++++-||++|+.|++|.+
T Consensus 87 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 87 KEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455566666666666666666666654
No 328
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=26.72 E-value=3.5e+02 Score=25.67 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=53.4
Q ss_pred CCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC----cccccCChhHHHH
Q 010842 195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT----STTAVDNVEPLAE 270 (499)
Q Consensus 195 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt----~~G~id~l~~I~~ 270 (499)
...++.+.+.+.-.| .++.+... ...++++++.+++.-...|...+++ +-.|++ ++=..-++..|..
T Consensus 199 ~~~n~~LL~~va~~~----kPVilk~G----~~~tl~ei~~Ave~i~~~GN~~viL-ceRG~~typ~~~~~~vdl~ai~~ 269 (350)
T 1vr6_A 199 NAQNFRLLSKAGSYN----KPVLLKRG----FMNTIEEFLLSAEYIANSGNTKIIL-CERGIRTFEKATRNTLDISAVPI 269 (350)
T ss_dssp GTTCHHHHHHHHTTC----SCEEEECC----TTCCHHHHHHHHHHHHHTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHH
T ss_pred cccCHHHHHHHHccC----CcEEEcCC----CCCCHHHHHHHHHHHHHCCCCeEEE-EeCCCCCCCCcChhhhhHHHHHH
Confidence 334455455444333 35556543 1348999999998877777654433 323331 2222356788888
Q ss_pred HHHHhCCEEEeeccccch
Q 010842 271 VANEYGIWVHVDAAYAGS 288 (499)
Q Consensus 271 ia~~~~~~lhvD~A~g~~ 288 (499)
+.+.+++++++|..|+.+
T Consensus 270 lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 270 IRKESHLPILVDPSHSGG 287 (350)
T ss_dssp HHHHBSSCEEECHHHHHC
T ss_pred HHHhhCCCEEEeCCCCCc
Confidence 877779999999999865
No 329
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=26.37 E-value=2.3e+02 Score=25.00 Aligned_cols=53 Identities=17% Similarity=0.062 Sum_probs=34.1
Q ss_pred chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS 258 (499)
Q Consensus 198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~ 258 (499)
.....+.+..++- ++..+.+|- -|.+++++.+++-.+....+-+++-++|...
T Consensus 43 ~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 43 KAGAERVAGEIGD---AALAVAADI-----SKEADVDAAVEAALSKFGKVDILVNNAGIGH 95 (261)
T ss_dssp HHHHHHHHHHHCT---TEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHhCC---ceEEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 3445566666666 888888873 4778888887765443223456777776543
No 330
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=26.34 E-value=27 Score=35.84 Aligned_cols=27 Identities=15% Similarity=0.284 Sum_probs=16.5
Q ss_pred cccccCChhHHHHHHHHhCCEEEeecc
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
..|..++++++++-||++|+.|++|.+
T Consensus 75 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 75 EYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 455566666666666666666666654
No 331
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=26.06 E-value=3.5e+02 Score=24.04 Aligned_cols=56 Identities=9% Similarity=-0.029 Sum_probs=35.8
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
....+....++- .+..+.+| --|.+.+++.+++-.+....+-+|+-++|....+.+
T Consensus 40 ~~~~~~~~~~~~---~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 95 (281)
T 3m1a_A 40 EALDDLVAAYPD---RAEAISLD-----VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAF 95 (281)
T ss_dssp GGGHHHHHHCTT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCT
T ss_pred HHHHHHHHhccC---CceEEEee-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCh
Confidence 345555555555 78888877 347888888877654432335567888877665554
No 332
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=25.75 E-value=28 Score=35.71 Aligned_cols=30 Identities=10% Similarity=0.125 Sum_probs=22.4
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 72 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 72 MNEFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345677778888888888888888888654
No 333
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.72 E-value=19 Score=35.44 Aligned_cols=28 Identities=32% Similarity=0.398 Sum_probs=17.4
Q ss_pred cccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 258 STTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
..|..++++++++-||++|+.+++|.++
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3466666666666666666666666543
No 334
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=25.65 E-value=30 Score=35.94 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=24.6
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.|++|.++
T Consensus 192 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 192 DPRYGSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 445788888899999999999999999764
No 335
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=25.44 E-value=30 Score=36.60 Aligned_cols=31 Identities=23% Similarity=0.103 Sum_probs=26.9
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++|+.|++|.++
T Consensus 100 idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 100 IEEHFGNWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3456888999999999999999999999865
No 336
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=25.44 E-value=30 Score=36.60 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=26.4
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++||.|++|.++
T Consensus 108 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 138 (686)
T 1d3c_A 108 TNPAYGTIADFQNLIAAAHAKNIKVIIDFAP 138 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 3456788999999999999999999999764
No 337
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=25.39 E-value=32 Score=35.66 Aligned_cols=30 Identities=20% Similarity=0.149 Sum_probs=26.6
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.+++|.++
T Consensus 202 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 202 RTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp SBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345788999999999999999999999875
No 338
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=25.26 E-value=30 Score=36.51 Aligned_cols=31 Identities=23% Similarity=0.221 Sum_probs=26.2
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++||.|++|.++
T Consensus 104 idp~~Gt~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 104 PNPFFGTLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3456788999999999999999999999764
No 339
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=25.23 E-value=25 Score=36.38 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=20.7
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
+...|..++++++++-||++||.|++|.++
T Consensus 213 d~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 213 DPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 344566677777777777777777777654
No 340
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=25.14 E-value=29 Score=35.56 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=17.8
Q ss_pred CcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 257 TSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 257 t~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
...|..++++++++-||++|+.|++|.+
T Consensus 73 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 73 DEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3456666666666666666666666654
No 341
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.05 E-value=3.6e+02 Score=24.41 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
.++..+.+| --|.+.+++.+++-.+.-..+-++|-++|....+.+.
T Consensus 91 ~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 136 (293)
T 3rih_A 91 GNVIGVRLD-----VSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLD 136 (293)
T ss_dssp SCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred CcEEEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 378888887 3478888888876544322345677788776655554
No 342
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=25.04 E-value=3.3e+02 Score=24.08 Aligned_cols=46 Identities=15% Similarity=0.090 Sum_probs=29.8
Q ss_pred CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
.++..+.+|- -|.+.+++.+++-.++...+-+++-++|....+.+.
T Consensus 60 ~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 105 (262)
T 3pk0_A 60 GKVIGVQTDV-----SDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLA 105 (262)
T ss_dssp SCEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred CcEEEEEcCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChh
Confidence 3788888873 478888888776544322345677777766555443
No 343
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=24.97 E-value=2.7e+02 Score=25.04 Aligned_cols=39 Identities=21% Similarity=0.024 Sum_probs=26.5
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
++..+.+| --|.+++++.+++-.+....+-++|-++|..
T Consensus 78 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 78 QAIALEAD-----VSDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 78888887 3478888888876544323445677777754
No 344
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=24.89 E-value=1e+02 Score=24.21 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=33.1
Q ss_pred cCHHHHHHHHHHHHHcC-----CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842 228 LSPQLLRRAVEADVEAG-----LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH 280 (499)
Q Consensus 228 ~d~~~L~~~i~~~~~~g-----~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh 280 (499)
.|++.+.+.|++..++. ..|++|-+..-. ...++.+|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 48888888888766542 345443333221 23579999999999998773
No 345
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=24.89 E-value=2.5e+02 Score=24.66 Aligned_cols=51 Identities=18% Similarity=0.089 Sum_probs=33.1
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
....+....+|- ++..+.+| --|.+.+++.+++-.+....+-+++-++|..
T Consensus 39 ~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 89 (254)
T 3kzv_A 39 APLKKLKEKYGD---RFFYVVGD-----ITEDSVLKQLVNAAVKGHGKIDSLVANAGVL 89 (254)
T ss_dssp HHHHHHHHHHGG---GEEEEESC-----TTSHHHHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHHhCC---ceEEEECC-----CCCHHHHHHHHHHHHHhcCCccEEEECCccc
Confidence 345555555665 78888887 3478888888876544333455677777763
No 346
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=24.83 E-value=58 Score=29.99 Aligned_cols=23 Identities=26% Similarity=0.416 Sum_probs=19.1
Q ss_pred ccCChhHHHHHHHHhCCEEEeec
Q 010842 261 AVDNVEPLAEVANEYGIWVHVDA 283 (499)
Q Consensus 261 ~id~l~~I~~ia~~~~~~lhvD~ 283 (499)
..+.++++.++|+++|+.+++|-
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEe
Confidence 34567899999999999998773
No 347
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.65 E-value=3.3e+02 Score=24.18 Aligned_cols=49 Identities=22% Similarity=0.156 Sum_probs=32.3
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
...|. ++..+.+|- -|.+++++.+++-.+....+-+++-++|....+.+
T Consensus 73 ~~~~~---~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 121 (267)
T 3u5t_A 73 EAAGG---KALTAQADV-----SDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI 121 (267)
T ss_dssp HHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred HhcCC---eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 34455 788888873 47888888887655443345577778876655544
No 348
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=24.57 E-value=26 Score=36.17 Aligned_cols=31 Identities=26% Similarity=0.421 Sum_probs=22.7
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
+...|..++++++++-||++|+.|++|.++.
T Consensus 212 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 212 DPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 3456777778888888888888888887653
No 349
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=24.40 E-value=30 Score=36.19 Aligned_cols=33 Identities=12% Similarity=0.067 Sum_probs=27.6
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
......|..++++++++-||++||.|++|.++.
T Consensus 277 ~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 277 HVARRLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp EECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCcccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 345567888999999999999999999998753
No 350
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.31 E-value=3.4e+02 Score=24.23 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=29.5
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+++++.+++-.+....+-++|-++|....+.+
T Consensus 82 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (271)
T 3v2g_A 82 RAVAIRAD-----NRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPL 125 (271)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 78888887 348888888887654432235567777776555543
No 351
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=24.10 E-value=2.4e+02 Score=25.70 Aligned_cols=44 Identities=5% Similarity=-0.054 Sum_probs=29.7
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+.+++.+++..+....+-+|+-++|....+.+
T Consensus 81 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 124 (301)
T 3tjr_A 81 DAHGVVCD-----VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPL 124 (301)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred ceEEEEcc-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 78888887 347888888887654432234567788877655554
No 352
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=24.05 E-value=33 Score=36.25 Aligned_cols=30 Identities=20% Similarity=0.137 Sum_probs=25.4
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++|+.+++|.++
T Consensus 110 dp~~Gt~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 110 NPYFGSFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 446788899999999999999999999764
No 353
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=23.98 E-value=30 Score=36.03 Aligned_cols=31 Identities=19% Similarity=0.135 Sum_probs=24.8
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
++...|..++++++++-||++|+.|++|.++
T Consensus 197 ~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~ 227 (617)
T 1m7x_A 197 PTRRFGTRDDFRYFIDAAHAAGLNVILDWVP 227 (617)
T ss_dssp ECGGGSCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4456788888888888888888888888764
No 354
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=23.84 E-value=31 Score=35.88 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=24.6
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.+....|..++++++++-||++|+.+++|-++
T Consensus 184 ~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~ 215 (602)
T 2bhu_A 184 APYAPYGRPEDLMALVDAAHRLGLGVFLDVVY 215 (602)
T ss_dssp EECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCcCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34455677888888888888888888888754
No 355
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=23.82 E-value=35 Score=35.64 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=26.4
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++|+.|++|.++
T Consensus 155 vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 155 VNPALGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp BCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3456788899999999999999999999765
No 356
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=23.62 E-value=82 Score=29.09 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=35.2
Q ss_pred CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
++ +|.+.+++.++...+.|..-+++..|.|...+=..+.-.++.+.+.+. .+++++
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 46 888888888888777775555555555555444445556666665543 355554
No 357
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=23.49 E-value=1.8e+02 Score=19.90 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=29.9
Q ss_pred CeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE
Q 010842 188 KLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL 250 (499)
Q Consensus 188 ~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v 250 (499)
+.++|....+.++ +...+...|+ .+..++++.+. .+.+.+.+....+..|.++
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i---~~~~~~i~~~~-------~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGV---SFQELPIDGNA-------AKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTC---CCEEEECTTCS-------HHHHHHHHHHSSCCSCEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHCCC---CcEEEECCCCH-------HHHHHHHHHhCCCCcCEEE
Confidence 4566766555555 4455566788 88888887421 2233333333445678653
No 358
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=23.35 E-value=77 Score=28.47 Aligned_cols=37 Identities=32% Similarity=0.322 Sum_probs=28.5
Q ss_pred ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
.-.+|++|-|.+..|. +|++ .+++++++|+.+|+=|.
T Consensus 10 ~k~iillTDG~~~~g~-~p~~-aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 10 IRQILVITDGCSNIGP-DPVE-AARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEEESSCCCSSS-CHHH-HHHHHHHTTCEEEEEEE
T ss_pred ccEEEEEccCCCCCCC-CHHH-HHHHHHHCCCEEEEEEe
Confidence 3457889999988886 7775 56789999999877543
No 359
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=23.30 E-value=35 Score=35.29 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=25.9
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
....|..++++++++-||++|+.|++|.++.
T Consensus 81 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 81 WPTYGTNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 3457888999999999999999999998753
No 360
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=23.22 E-value=1.3e+02 Score=23.73 Aligned_cols=47 Identities=21% Similarity=0.077 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
..+.+.+.+++..+.|-+ .|+++.|. .+ +++.++|+++|+.++ ..|.
T Consensus 67 p~~~v~~~v~e~~~~g~k--~v~~~~G~-----~~--~e~~~~a~~~Girvv-~nC~ 113 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPK--RVIFNPGT-----EN--EELEEILSENGIEPV-IGCT 113 (122)
T ss_dssp CHHHHGGGHHHHHHHCCS--EEEECTTC-----CC--HHHHHHHHHTTCEEE-ESCH
T ss_pred CHHHHHHHHHHHHhcCCC--EEEECCCC-----Ch--HHHHHHHHHcCCeEE-CCcC
Confidence 455666666666666644 36666654 22 799999999999987 3444
No 361
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=23.22 E-value=29 Score=35.50 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=13.3
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecc
Q 010842 259 TTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 259 ~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
.|..++++++++-||++|+.|++|.+
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 75 FGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp GCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 44445555555555555555555543
No 362
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=23.15 E-value=1.5e+02 Score=27.63 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=23.5
Q ss_pred CeEEEcCCCC-chhHHHHHHHhCCCCCCeEEeeCC
Q 010842 188 KLVVYGSDQT-HSTFAKVCKLAGVSPANIRALPTS 221 (499)
Q Consensus 188 ~~~i~~s~~~-H~s~~ka~~~~G~g~~~v~~v~~~ 221 (499)
+.+|+++... -..-.+.++.+|. +|+.++-+
T Consensus 97 ~~~iv~p~~~~~~~k~~~~~~~GA---~v~~~~~~ 128 (325)
T 1j0a_A 97 DAILVLRGKEELKGNYLLDKIMGI---ETRVYDAK 128 (325)
T ss_dssp EEEEEEESCCCSCHHHHHHHHTTC---EEEEESCC
T ss_pred cEEEEECCCCCCCchHHHHHHCCC---EEEEeCcc
Confidence 5677888776 5556677888999 99988754
No 363
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=23.01 E-value=35 Score=35.79 Aligned_cols=30 Identities=23% Similarity=0.218 Sum_probs=25.4
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
....|..++++++++-||++||.|++|.++
T Consensus 149 dp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 149 EPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445788899999999999999999999764
No 364
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=22.95 E-value=34 Score=36.24 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=26.5
Q ss_pred CCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 255 gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
.....|..++++++++-||++|+.|++|.++
T Consensus 304 idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 304 IDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3455788899999999999999999999874
No 365
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=22.75 E-value=30 Score=35.55 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=26.2
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
..+...|..++++++++-||++|+.+++|.++
T Consensus 159 ~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 159 AVQNSYGGPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp EECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccccCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 34566788889999999999999999999765
No 366
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=22.73 E-value=2.1e+02 Score=22.49 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=42.6
Q ss_pred CCeEEEcCCCCchh--HHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 187 HKLVVYGSDQTHST--FAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 187 ~~~~i~~s~~~H~s--~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
.+.+||....+.+| ..+.+.-. |. ....+.++.+ -|.+++++.+.+.+.....|.+ ...| ...|.
T Consensus 14 ~~Vvvysk~~Cp~C~~ak~lL~~~~~~~v---~~~~idid~~----~d~~~~~~~l~~~~G~~tVP~I--fI~G-~~IGG 83 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSKGMKELLENEYQFIP---NYYIIELDKH----GHGEELQEYIKLVTGRGTVPNL--LVNG-VSRGG 83 (127)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHEEEES---CCEEEEGGGS----TTHHHHHHHHHHHHSCCSSCEE--EETT-EECCC
T ss_pred CCEEEEEcCCCccHHHHHHHHHHhcccCC---CcEEEEecCC----CCHHHHHHHHHHHcCCCCcceE--EECC-EEEcC
Confidence 46777776666665 23333332 45 6777777642 3677888888776655566743 3333 34566
Q ss_pred cCChhHH
Q 010842 262 VDNVEPL 268 (499)
Q Consensus 262 id~l~~I 268 (499)
.|++.++
T Consensus 84 ~ddl~~l 90 (127)
T 3l4n_A 84 NEEIKKL 90 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
No 367
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=22.67 E-value=38 Score=35.78 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=26.5
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
....|..++++++++-||++|+.+++|.++-
T Consensus 314 dp~~Gt~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 314 HPALGTLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 3456777899999999999999999998764
No 368
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.45 E-value=3.4e+02 Score=23.94 Aligned_cols=44 Identities=7% Similarity=-0.031 Sum_probs=29.6
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+.+| --|.+++++.+++..+....+-+++-++|....+.+
T Consensus 55 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (258)
T 3oid_A 55 KVLVVKAN-----VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPV 98 (258)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888887 348888888887754432345567778876554443
No 369
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.42 E-value=3.1e+02 Score=24.51 Aligned_cols=44 Identities=14% Similarity=0.119 Sum_probs=29.6
Q ss_pred HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842 206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257 (499)
Q Consensus 206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt 257 (499)
+-.|. ++..+++| --|.+++++.+++-.++--++-++|-++|..
T Consensus 52 ~~~g~---~~~~~~~D-----vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 52 RGMGK---EVLGVKAD-----VSKKKDVEEFVRRTFETYSRIDVLCNNAGIM 95 (254)
T ss_dssp HHTTC---CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HhcCC---cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 34455 88888887 4588888888877655423344677777743
No 370
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.08 E-value=4e+02 Score=23.36 Aligned_cols=43 Identities=14% Similarity=0.000 Sum_probs=27.1
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++..+++| --|.+.+++.+++-.+....+-+++-++|....+.
T Consensus 56 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 98 (260)
T 1x1t_A 56 KVLYDGAD-----LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL 98 (260)
T ss_dssp CEEEECCC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 78888876 34788888888764433223446777777554443
No 371
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=22.02 E-value=37 Score=35.41 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=25.0
Q ss_pred cCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
.++...|..++++++++-||++|+.|++|.++.
T Consensus 194 ~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 194 APHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp EECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 345567778888888888888888888887643
No 372
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.89 E-value=41 Score=31.31 Aligned_cols=48 Identities=17% Similarity=0.240 Sum_probs=24.5
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE 274 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~ 274 (499)
.+|.+.+++.++...+.|-.-+++..|.|..++=+.+.-.++.+.+.+
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~ 64 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAE 64 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH
Confidence 677777777776666655444333333333333333444445554443
No 373
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=21.85 E-value=2.7e+02 Score=24.91 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=30.5
Q ss_pred hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
.|. ++..+.+| --|.+++++.+++-.+....+-++|-++|....+.+
T Consensus 75 ~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 121 (277)
T 4fc7_A 75 TGR---RCLPLSMD-----VRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPA 121 (277)
T ss_dssp HSS---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cCC---cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCc
Confidence 365 78888887 347888888887654432344567777775544433
No 374
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=21.54 E-value=2.2e+02 Score=25.17 Aligned_cols=52 Identities=12% Similarity=-0.091 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842 201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT 260 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G 260 (499)
..+....++. ++..+.+| --|.+++++.+++..+....+-+++-++|....+
T Consensus 44 ~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 95 (257)
T 3tpc_A 44 GEEPAAELGA---AVRFRNAD-----VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGE 95 (257)
T ss_dssp --------------CEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHhCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 3444444455 77888876 3478888888876544322345677777765443
No 375
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.18 E-value=3.9e+02 Score=23.26 Aligned_cols=64 Identities=8% Similarity=-0.041 Sum_probs=35.7
Q ss_pred EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA 261 (499)
Q Consensus 190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~ 261 (499)
++++.........+.++..|. ++..+++|- -|.+++++.+++-.+.-..+-+++-++|....+.
T Consensus 34 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (249)
T 2ew8_A 34 IAIADLVPAPEAEAAIRNLGR---RVLTVKCDV-----SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP 97 (249)
T ss_dssp EEEEESSCCHHHHHHHHHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred EEEEcCCchhHHHHHHHhcCC---cEEEEEeec-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 344443332333333344454 788888773 4788888887764433223446777777655443
No 376
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=21.14 E-value=86 Score=28.97 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=33.2
Q ss_pred ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh---CCEEEe
Q 010842 227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY---GIWVHV 281 (499)
Q Consensus 227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~---~~~lhv 281 (499)
.+|.+.+++.++...+.|-.-+++..+.|...+=+.+.-.++.+.+.+. .+++++
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 7888888888777777665555554555554444445555666655543 355554
No 377
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=21.04 E-value=1.1e+02 Score=29.38 Aligned_cols=56 Identities=11% Similarity=0.075 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHcCCccEEEEEecCCCc-ccccCChhHHHHHHHHhCCEEEeecc
Q 010842 229 SPQLLRRAVEADVEAGLVPLFLCATVGTTS-TTAVDNVEPLAEVANEYGIWVHVDAA 284 (499)
Q Consensus 229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~-~G~id~l~~I~~ia~~~~~~lhvD~A 284 (499)
..++.++-|+...+.|..-++-....+... .-....+++|.++|+++|+.+++|-.
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIs 71 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDIS 71 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 445556777777777866555444444322 23347789999999999999999965
No 378
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.94 E-value=3.5e+02 Score=22.60 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=40.7
Q ss_pred hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842 199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW 278 (499)
Q Consensus 199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~ 278 (499)
+.+.+.+.-+|+ .+..+.+-.| |.+.++++|++..+.. -+|+.|.|+. .|.-|=..+.. ++..|..
T Consensus 26 ~~l~~~L~~~G~---~v~~~~iv~D-----d~~~I~~~l~~a~~~~---DlVittGG~g-~~~~D~T~ea~--a~~~~~~ 91 (172)
T 3kbq_A 26 AFIGNFLTYHGY---QVRRGFVVMD-----DLDEIGWAFRVALEVS---DLVVSSGGLG-PTFDDMTVEGF--AKCIGQD 91 (172)
T ss_dssp HHHHHHHHHTTC---EEEEEEEECS-----CHHHHHHHHHHHHHHC---SEEEEESCCS-SSTTCCHHHHH--HHHHTCC
T ss_pred HHHHHHHHHCCC---EEEEEEEeCC-----CHHHHHHHHHHHHhcC---CEEEEcCCCc-CCcccchHHHH--HHHcCCC
Confidence 345666777888 7777665433 6788888887654321 2455555544 45545444443 3334555
Q ss_pred EEeec
Q 010842 279 VHVDA 283 (499)
Q Consensus 279 lhvD~ 283 (499)
++.|.
T Consensus 92 l~~~~ 96 (172)
T 3kbq_A 92 LRIDE 96 (172)
T ss_dssp CEECH
T ss_pred eeeCH
Confidence 55553
No 379
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=20.88 E-value=1.2e+02 Score=27.90 Aligned_cols=80 Identities=18% Similarity=0.136 Sum_probs=49.8
Q ss_pred CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHH
Q 010842 197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVAN 273 (499)
Q Consensus 197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~ 273 (499)
....+.+.+.-.|. ++.+... ..+++++++.+++.-...|..- ++++-.|+ .++.-+ |+..|..+.+
T Consensus 122 ~n~~LLr~va~~gk----PVilK~G----~~~t~~ei~~ave~i~~~Gn~~-i~L~erg~-~y~~~~~~vdl~~i~~lk~ 191 (285)
T 3sz8_A 122 RQTDLVVAIAKAGK----PVNVKKP----QFMSPTQLKHVVSKCGEVGNDR-VMLCERGS-SFGYDNLVVDMLGFRQMAE 191 (285)
T ss_dssp TCHHHHHHHHHTSS----CEEEECC----TTSCGGGTHHHHHHHHHTTCCC-EEEEECCE-ECSSSCEECCTTHHHHHHH
T ss_pred CCHHHHHHHHccCC----cEEEeCC----CCCCHHHHHHHHHHHHHcCCCc-EEEEeCCC-CCCCCcCccCHHHHHHHHH
Confidence 34445555444444 5555532 1257888888887776666544 23333333 334444 7899988877
Q ss_pred Hh-CCEEEeecccc
Q 010842 274 EY-GIWVHVDAAYA 286 (499)
Q Consensus 274 ~~-~~~lhvD~A~g 286 (499)
.. |+++.+|..|+
T Consensus 192 ~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 192 TTGGCPVIFDVTHS 205 (285)
T ss_dssp HTTSCCEEEETTTT
T ss_pred hCCCCCEEEeCCCc
Confidence 77 79999999886
No 380
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=20.75 E-value=3.6e+02 Score=23.51 Aligned_cols=45 Identities=22% Similarity=0.109 Sum_probs=28.8
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD 263 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id 263 (499)
++..+.+| --|.+.+++.+++-.+....+-+++-++|....+.+.
T Consensus 57 ~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 101 (247)
T 2jah_A 57 KVHVLELD-----VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE 101 (247)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCST
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchh
Confidence 78888877 3478888888876443322344677777766555443
No 381
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.66 E-value=3.7e+02 Score=23.55 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=28.8
Q ss_pred CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV 262 (499)
Q Consensus 214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i 262 (499)
++..+++| --|.+.+++.+++-.+....+-+|+-++|....+.+
T Consensus 52 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 95 (256)
T 1geg_A 52 HAVAVKVD-----VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI 95 (256)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCG
T ss_pred cEEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 78888877 347888888887654433345567777776544433
No 382
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=20.58 E-value=39 Score=35.92 Aligned_cols=31 Identities=29% Similarity=0.272 Sum_probs=26.8
Q ss_pred CCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYA 286 (499)
Q Consensus 256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g 286 (499)
++..|..++++++++-||++||-+++|.++.
T Consensus 306 ~~~yGt~~dfk~lV~~~H~~GI~VilD~V~N 336 (722)
T 3k1d_A 306 TSRFGTPDDFRALVDALHQAGIGVIVDWVPA 336 (722)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEEEee
Confidence 4557788999999999999999999998753
No 383
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=20.53 E-value=2.2e+02 Score=22.72 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCeEEEcC-----CCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842 187 HKLVVYGS-----DQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259 (499)
Q Consensus 187 ~~~~i~~s-----~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~ 259 (499)
.+.+||.. ..+.+| +.+.+.-.|+ ....++++. |. .+++.+.+.......|.+ ..-|. ..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv---~y~~vdI~~------d~-~~~~~L~~~~G~~tvP~V--fI~G~-~i 101 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGE---RFAYVDILQ------NP-DIRAELPKYANWPTFPQL--WVDGE-LV 101 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCS---CCEEEEGGG------CH-HHHHHHHHHHTCCSSCEE--EETTE-EE
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCC---ceEEEECCC------CH-HHHHHHHHHHCCCCcCEE--EECCE-EE
Confidence 56777766 455555 4455566677 788888763 33 455555554444455743 33333 45
Q ss_pred cccCChhH
Q 010842 260 TAVDNVEP 267 (499)
Q Consensus 260 G~id~l~~ 267 (499)
|..|++.+
T Consensus 102 GG~d~l~~ 109 (135)
T 2wci_A 102 GGCDIVIE 109 (135)
T ss_dssp ESHHHHHH
T ss_pred EChHHHHH
Confidence 66666653
No 384
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=20.43 E-value=2.2e+02 Score=26.24 Aligned_cols=44 Identities=16% Similarity=0.319 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCCCeEEeeCC------CCCCCccC---HHHHHHHHHHHHHcCCcc
Q 010842 201 FAKVCKLAGVSPANIRALPTS------VDANFSLS---PQLLRRAVEADVEAGLVP 247 (499)
Q Consensus 201 ~~ka~~~~G~g~~~v~~v~~~------~~~~~~~d---~~~L~~~i~~~~~~g~~p 247 (499)
-.+.++-+|+ +.+++|+. +.+.+.+| ++.+++.|+...+.|..+
T Consensus 46 d~~~l~~~G~---n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~v 98 (320)
T 3nco_A 46 YFKIIKERGF---DSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVV 98 (320)
T ss_dssp HHHHHHHHTC---CEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHCCC---CEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEE
Confidence 4455667899 99999863 12235677 566677777777777543
No 385
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=20.39 E-value=1.1e+02 Score=29.46 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=37.2
Q ss_pred cCHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCChhHHHHHHHHhCCEEEeeccc
Q 010842 228 LSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDNVEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 228 ~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~l~~I~~ia~~~~~~lhvD~A~ 285 (499)
-+.++.++-|+...+.|..-++-....+.. ..-....+++|.++|+++|+.+++|-.-
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp 96 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAP 96 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 356666777877777775544444433322 2344477899999999999999999653
No 386
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=20.01 E-value=57 Score=23.88 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=18.1
Q ss_pred hhHHHHHHHHhCCEEEeeccc
Q 010842 265 VEPLAEVANEYGIWVHVDAAY 285 (499)
Q Consensus 265 l~~I~~ia~~~~~~lhvD~A~ 285 (499)
-.+|.++|+++|++++-|-..
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 478999999999999999643
Done!