BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010845
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80874|NDA2_ARATH Alternative NAD(P)H dehydrogenase 2, mitochondrial OS=Arabidopsis
thaliana GN=NDA2 PE=1 SV=1
Length = 508
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/493 (78%), Positives = 430/493 (87%), Gaps = 6/493 (1%)
Query: 8 LRNPTAKSYSYSSPSIIMPSNLILTCLSHFTTDAS-PSTVQLTQYSGLGPTKANEKPRVV 66
RN + S SY+ + S + + A P+ V +QYSGL PT+ EKPRVV
Sbjct: 21 FRNSGSSSLSYT-----LASRFCTAQETQIQSPAKIPNDVDRSQYSGLPPTREGEKPRVV 75
Query: 67 VLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPA 126
VLGSGWAGCRLMKGIDT+LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI+RIQPA
Sbjct: 76 VLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQPA 135
Query: 127 ISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186
ISREPGS+FFL++C+ +D D H VHCET+TD L TL+PWKFKI+YDKLVIA GAEASTFG
Sbjct: 136 ISREPGSFFFLANCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKLVIASGAEASTFG 195
Query: 187 IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFS 246
IHGV ENA FLREVHHAQEIRRKLLLNLMLSD PGIS+EEK RLLHCVVVGGGPTGVEFS
Sbjct: 196 IHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCVVVGGGPTGVEFS 255
Query: 247 GELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIV 306
GELSDFIM+DVRQRY+HVKD IHVTLIEA +ILSSFDDRLR YA QL+KSGVR VRGIV
Sbjct: 256 GELSDFIMKDVRQRYAHVKDDIHVTLIEARDILSSFDDRLRRYAIKQLNKSGVRFVRGIV 315
Query: 307 KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366
KDV SQKLIL+DGTEVPYGLLVWSTGVGPS V+SL LPK P GRIGIDEW+RVPSVQDV
Sbjct: 316 KDVQSQKLILDDGTEVPYGLLVWSTGVGPSPFVRSLGLPKDPTGRIGIDEWMRVPSVQDV 375
Query: 367 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 426
FA+GDCSGYLE+TGK LPALAQVAER+GKYL +LLN IGK GGRANSAK++ELG PFV
Sbjct: 376 FAIGDCSGYLETTGKPTLPALAQVAEREGKYLANLLNAIGKGNGGRANSAKEIELGVPFV 435
Query: 427 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 486
Y+HLGSMATIGRYKALVDLR++K++KG+S+ GF+SW +WRSAYLTRV+SWRNRFYVA+NW
Sbjct: 436 YKHLGSMATIGRYKALVDLRESKDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINW 495
Query: 487 ATTFVFGRDISRI 499
TTFVFGRDISRI
Sbjct: 496 FTTFVFGRDISRI 508
>sp|Q8GWA1|NDA1_ARATH Alternative NAD(P)H dehydrogenase 1, mitochondrial OS=Arabidopsis
thaliana GN=NDA1 PE=2 SV=1
Length = 510
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/494 (77%), Positives = 434/494 (87%), Gaps = 3/494 (0%)
Query: 6 HLLRNPTAKSYSYSSPSIIMPSNLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRV 65
++ RNP +SY+ SS +T D + ++ +Y GL PTK EKPRV
Sbjct: 20 NVFRNP--ESYTLSSRFCTALQKQQVTDTVQAKEDVV-NALEPQRYDGLAPTKEGEKPRV 76
Query: 66 VVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQP 125
+VLGSGWAGCR++KGIDTS+YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI+RIQP
Sbjct: 77 LVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQP 136
Query: 126 AISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185
AISREPGSY+FL++C+ +D DNH VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTF
Sbjct: 137 AISREPGSYYFLANCSKLDADNHEVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTF 196
Query: 186 GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 245
GI+GV ENA FLREVHHAQEIRRKLLLNLMLS+VPGI E+EK RLLHCVVVGGGPTGVEF
Sbjct: 197 GINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKRLLHCVVVGGGPTGVEF 256
Query: 246 SGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI 305
SGELSDFIM+DVRQRYSHVKD I VTLIEA +ILSSFDDRLRHYA QL+KSGV+LVRGI
Sbjct: 257 SGELSDFIMKDVRQRYSHVKDDIRVTLIEARDILSSFDDRLRHYAIKQLNKSGVKLVRGI 316
Query: 306 VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQD 365
VK+V QKLIL+DGTEVPYG LVWSTGVGPS+ V+SLD PK PGGRIGIDEW+RVPSVQD
Sbjct: 317 VKEVKPQKLILDDGTEVPYGPLVWSTGVGPSSFVRSLDFPKDPGGRIGIDEWMRVPSVQD 376
Query: 366 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF 425
VFA+GDCSGYLESTGK+ LPALAQVAER+GKYL +L N +GKAGGGRANSAK+MELG+PF
Sbjct: 377 VFAIGDCSGYLESTGKSTLPALAQVAEREGKYLANLFNVMGKAGGGRANSAKEMELGEPF 436
Query: 426 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 485
VY+HLGSMATIGRYKALVDLR++KE KG+S+AGFLSW +WRSAYLTRVVSWRNRFYVA+N
Sbjct: 437 VYKHLGSMATIGRYKALVDLRESKEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAIN 496
Query: 486 WATTFVFGRDISRI 499
W TTFVFGRDISRI
Sbjct: 497 WLTTFVFGRDISRI 510
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 270/474 (56%), Gaps = 33/474 (6%)
Query: 28 NLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYD 87
NLI+ ++ + + S+++ K E ++++LG GW +K +++ YD
Sbjct: 5 NLIIRGRNYISDHLTKSSLEKAIIRRQKRGKVIENEKLIILGCGWGSYSFLKNLNSIKYD 64
Query: 88 VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHCAGIDTD 146
+ +SPRNH +FTPLL S+ VGTLEFRS+AEP+ +R+ + ++ + I+ +
Sbjct: 65 ITVISPRNHFLFTPLLTSSAVGTLEFRSIAEPVR-----TTRDINEFKYIQASVTSINPE 119
Query: 147 NHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 206
N+ V V +P F++ YDKLVI +G+ +TFGI GV+ENA FL+E+HHA+EI
Sbjct: 120 NNSV---LVKSTFHNEKP--FEMKYDKLVIGVGSRNNTFGIKGVEENANFLKELHHAREI 174
Query: 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK- 265
R+K++ + +P +S EE+ RLL V+VGGG TG+EF+ EL+DF D+ + + V
Sbjct: 175 RQKIIECFERASLPDVSTEERERLLSFVIVGGGATGIEFTSELNDFFSEDLSRLFPFVPV 234
Query: 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVP 323
+ + + L+EA+ +ILS+FD +L A SG+ + VK+V +IL++G +P
Sbjct: 235 NEVKIILLEASGKILSTFDQKLVKKALINFRNSGIDVRTHSSVKEVLKDYVILDNGDRIP 294
Query: 324 YGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 383
YGLLVWSTG+G LVK+ K RI +D+ LRV + +VF+ GDC+
Sbjct: 295 YGLLVWSTGIGQHPLVKNSSFEKDSHDRIIVDDHLRVKNYSNVFSFGDCANVENKN---- 350
Query: 384 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 443
P AQVA + YL N + K N K PF ++ LG +A G+ ++
Sbjct: 351 YPPTAQVASQSAVYLAKEFNNLEKLN---PNPPK------PFAFKFLGLLAYTGKKSGIL 401
Query: 444 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 497
++ L+GF+ ++ WRSAYLTR+ S R++ V +W T +FGRDIS
Sbjct: 402 ------QTDFFDLSGFIGFITWRSAYLTRLGSLRSKIQVPFDWMRTLIFGRDIS 449
>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3A11.07 PE=3 SV=1
Length = 551
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 255/481 (53%), Gaps = 51/481 (10%)
Query: 56 PTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS 115
P K +VVLG+GW +++ IDTSL++V+ VSPRN+ +FT LL ST G++ RS
Sbjct: 85 PLPDPSKKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRS 144
Query: 116 VAEPIARIQPAISREPGSY--FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDK 173
+ +PI + R Y F+ + C +D D V+H + T + LE +I YD
Sbjct: 145 IVQPIRYML----RHKSCYVKFYEAECTDVDADKKVIHIKKTTTDGVDLEQ---EIKYDY 197
Query: 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 233
LV + GAE TF I G+ E FL+E+ AQ+IR ++L L + + E + R +H
Sbjct: 198 LVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHT 257
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATT 292
VVVGGGPTG+EF+GE++DFI D++ Y + D VTL+EA +L F +LR Y +
Sbjct: 258 VVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFAVTLVEALPSVLPMFSAKLRDYTQS 317
Query: 293 QLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPSTLVKSL- 342
S +++ +K V ++ + + DG++ +PYGLLVW+ G L K L
Sbjct: 318 LFDSSHIKIRTNTALKKVTAENIHVEVKNPDGSKQEEVIPYGLLVWAGGNRARPLTKKLM 377
Query: 343 DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 400
+ + R G +DE+L++ +D+FA+GDC+ T AQVA +QG YL
Sbjct: 378 EGSEEQNNRRGLVVDEYLKLKGYKDIFALGDCT-------HTAYAPTAQVASQQGAYLGQ 430
Query: 401 LLNRIGKAGGGRANSAKDMELGD----------------------PFVYRHLGSMATIGR 438
L N++G + + + + LGD PF Y H GS+A +G
Sbjct: 431 LFNKLGSLNFEKPSEDRHIALGDEMDSSTLISLANEKHASTKVFLPFKYSHQGSLAYVGH 490
Query: 439 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 498
KA+ D+ K L +G L++ WRS YL+ + S RNR V ++W +FGRDIS
Sbjct: 491 EKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNRTNVTLDWIRVKLFGRDISS 550
Query: 499 I 499
+
Sbjct: 551 L 551
>sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC947.15c PE=3 SV=1
Length = 551
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 251/477 (52%), Gaps = 64/477 (13%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI- 120
K +VVLGSGW +K +D SLY++ VSPR+H +FTP+L S VGTL S+ EPI
Sbjct: 90 KKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIV 149
Query: 121 ----ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176
+I P S + C IDT V T+ E I YD LV
Sbjct: 150 ALFKGKIDP-------SNIHQAECTAIDTSAKKVTIRGTTEANEGKEAV---IPYDTLVF 199
Query: 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEEEKSRLLHC 233
A+GA TFGI GV+++ FL+E A+++ ++ +L V +S EE++RLLH
Sbjct: 200 AIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIF--EILEQVRFNKDLSPEERARLLHI 257
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATT 292
VVGGGPTG+EF+ E+ DFI DV+ + ++ IHVTLIEA +L F L Y
Sbjct: 258 TVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTEN 317
Query: 293 QLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPSTLVKSL- 342
++++ + +VKDV+ + LI+ DG+ E+PYG+LVW+ G+ L ++L
Sbjct: 318 LFKNLNIKIMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLM 377
Query: 343 -DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 399
+P+ G R G +DE+ RV V +++AVGDC+ + LPA AQVA +QG +L
Sbjct: 378 SSIPEQSGARKGLIVDEFFRVKGVPEMYAVGDCAF-------SGLPATAQVANQQGAWLA 430
Query: 400 SLLNRIGKAG----------------------GGRANSAKDMELGDPFVYRHLGSMATIG 437
LN GK G + ++L +PF Y H G++A +G
Sbjct: 431 KNLNVEGKKFALHERIQALEKQLGEKEAPSQVAGLKQQVEQLKL-EPFKYHHQGALAYVG 489
Query: 438 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 494
KA+ DL+ K L L G + WR AYL ++S R++F V ++W T +FGR
Sbjct: 490 DEKAIADLKLPFMKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWLKTRLFGR 546
>sp|P40215|NDH1_YEAST External NADH-ubiquinone oxidoreductase 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE1 PE=1 SV=1
Length = 560
Score = 242 bits (617), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 269/488 (55%), Gaps = 51/488 (10%)
Query: 40 DASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99
+A+PST Q+ Q S P + K +V+LGSGW L+K +DT+LY+VV VSPRN+ +F
Sbjct: 93 EANPST-QVPQ-SDTFPNGSKRKT-LVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLF 149
Query: 100 TPLLASTCVGTLEFRSVAEPIARIQPAISREPGS-YFFLSHCAGIDTDNHVVHCETVTDE 158
TPLL ST VGT+E +S+ EP+ I R G +++ + +D +N + ++
Sbjct: 150 TPLLPSTPVGTIELKSIVEPVRTIA---RRSHGEVHYYEAEAYDVDPENKTIKVKSSAKN 206
Query: 159 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ +
Sbjct: 207 ----NDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAA 262
Query: 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 277
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA
Sbjct: 263 SLSPKDPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPN 322
Query: 278 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTG 332
IL+ FD L YA + + L ++ +VK VD+ + G +PYG+LVW+TG
Sbjct: 323 ILNMFDKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATG 382
Query: 333 VGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL- 387
P + K+L L + R + ID L++ + +FA+GDC T P L
Sbjct: 383 NAPREVSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLF 433
Query: 388 --AQVAERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRH 429
AQVA ++G+YL F +I + ++ D E+ + F Y H
Sbjct: 434 PTAQVAHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNH 493
Query: 430 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 489
G++A IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA
Sbjct: 494 KGALAYIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKV 551
Query: 490 FVFGRDIS 497
+ GRD S
Sbjct: 552 YFLGRDSS 559
>sp|F2Z699|NDH2_YARLI External alternative NADH-ubiquinone oxidoreductase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2
PE=1 SV=1
Length = 582
Score = 241 bits (616), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 248/481 (51%), Gaps = 55/481 (11%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
K +VVLGSGW +K +DTS Y+V+ VSPRN+ +FTPLL S GT+E RS+ EPI
Sbjct: 112 KKTLVVLGSGWGSVSFLKKLDTSNYNVIVVSPRNYFLFTPLLPSCPTGTIEHRSIMEPIR 171
Query: 122 RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE 181
I ++ + + ID + +V + E E K +I +D LV+ +GA
Sbjct: 172 GI--IRHKQAECQYLEADATKIDHEKRIVTIRSAVSENSKEEVIK-EIPFDYLVVGVGAM 228
Query: 182 ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 241
+STFGI GV+ENA FL+E+ AQ+IRR L+ + + E K RLLH VVVGGGPT
Sbjct: 229 SSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEKDPEVRK-RLLHTVVVGGGPT 287
Query: 242 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR 300
GVEF+ EL DF D+R+ ++D VTL+EA +L SF +L Y S +
Sbjct: 288 GVEFAAELQDFFEDDLRKWIPDIRDDFKVTLVEALPNVLPSFSKKLIDYTEKTFSDEKIS 347
Query: 301 -LVRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPSTLVKSL--DLPKSPG 349
L + +VK VD + DGT E+PYG LVW+TG +V+ L +P G
Sbjct: 348 ILTKTMVKSVDENVIRAEQTKGDGTKETLEMPYGTLVWATGNTVRPVVRELMSKIPAQKG 407
Query: 350 GRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407
R G ++E+L V + ++A+GDCS T AQVA ++G YL +LLN I K
Sbjct: 408 SRRGLLVNEYLVVEGTEGIWALGDCSA-------TKYAPTAQVASQEGSYLANLLNGIAK 460
Query: 408 AGG-------------------GRANSAKDMELGD----------PFVYRHLGSMATIGR 438
R N +E PF Y H GS+A IG
Sbjct: 461 TEDLNNEITNLEKQSEHTFDEQERKNIFAQLESKSRKLRRSRAMLPFEYSHQGSLAYIGS 520
Query: 439 YKALVDLRQNKES-KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 497
+A+ DL N S G +++ WRSAY++ S RN+ V ++W VFGRDIS
Sbjct: 521 DRAVADLSFNFWGIMNWSSGGTMTYYFWRSAYVSMCFSMRNKILVCIDWMKVRVFGRDIS 580
Query: 498 R 498
R
Sbjct: 581 R 581
>sp|Q07500|NDH2_YEAST External NADH-ubiquinone oxidoreductase 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE2 PE=1 SV=1
Length = 545
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 271/501 (54%), Gaps = 52/501 (10%)
Query: 34 LSHFTTDASPSTVQLTQYSGLGPTK--------AN--EKPRVVVLGSGWAGCRLMKGIDT 83
L+ +TT A V Y P K AN +K +V+LG+GW L+K +DT
Sbjct: 59 LTFYTTLAGTLYVSYELYKESNPPKQVPQSTAFANGLKKKELVILGTGWGAISLLKKLDT 118
Query: 84 SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHCAG 142
SLY+V VSPR+ +FTPLL ST VGT+E +S+ EP+ I R PG ++ +
Sbjct: 119 SLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVRSIA---RRTPGEVHYIEAEALD 175
Query: 143 IDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHH 202
+D V ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+
Sbjct: 176 VDPKAKKVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIED 231
Query: 203 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 262
AQ IR KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+
Sbjct: 232 AQNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMP 291
Query: 263 HVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG 319
+ + V LIEA IL+ FD L YA ++ + L V VK V+ + L +G
Sbjct: 292 DLSKEMKVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNG 351
Query: 320 ---TEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLR-VPSVQDVFAVGDC 372
T++ YG+LVW+TG P K+L +P+ R + I++ L + S ++A+GDC
Sbjct: 352 QTNTDIEYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDC 411
Query: 373 SGYLESTGKTVLPALAQVAERQGKYLFSLLNR---IGKAGGGRANSAKDMELG------- 422
+ + TG P AQVA ++G+YL +L++ I + NS + E+
Sbjct: 412 TAH---TG--FFPT-AQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVN 465
Query: 423 ------DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW 476
D F Y+H+G++A IG A+ DL S L G ++L W+SAYL +S
Sbjct: 466 LRKSKLDKFNYKHMGALAYIGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSI 523
Query: 477 RNRFYVAVNWATTFVFGRDIS 497
RNR +A++W + GRD S
Sbjct: 524 RNRILIAMDWTKVYFLGRDSS 544
>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
GN=NDB1 PE=1 SV=1
Length = 571
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 195/319 (61%), Gaps = 14/319 (4%)
Query: 65 VVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQ 124
VVVLG+GWAG +K +D + YDV VSP+N+ FTPLL S GT+E RS+ E + I
Sbjct: 52 VVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNIT 111
Query: 125 PAISREPGSYFFLSHCAGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEAS 183
+ E + + C ID N VHC V D+ + +F + YD L++A+GA+ +
Sbjct: 112 KKKNGE--IELWEADCFKIDHVNQKVHCRPVFKDDPEASQ--EFSLGYDYLIVAVGAQVN 167
Query: 184 TFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 243
TFG GV EN FL+EV AQ IRR ++ + +PG++EE++ R LH V+VGGGPTGV
Sbjct: 168 TFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGV 227
Query: 244 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLV 302
EF+ EL DFI+ D+ + Y VK+ + +TLI++ + IL++FD+R+ +A + ++ G+ +
Sbjct: 228 EFAAELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQ 287
Query: 303 RGI----VKDVDSQKLILNDG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR--IGI 354
G+ V D D + + G +P+GL++WSTGVG ++ GGR +
Sbjct: 288 TGMRVMSVTDKDITVKVKSSGELVSIPHGLILWSTGVGTRPVISDFMEQVGQGGRRAVAT 347
Query: 355 DEWLRVPSVQDVFAVGDCS 373
+EWL+V ++V+AVGDC+
Sbjct: 348 NEWLQVTGCENVYAVGDCA 366
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 384 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 438
LPA AQVA +QG YL NR+ + G R + + PF Y+H G A +G
Sbjct: 457 LPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKRFRTGGHHQF-RPFQYKHFGQFAPLGG 515
Query: 439 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 498
+A +L + S G S WL W S Y ++ VSWR R V +W ++FGRD SR
Sbjct: 516 DQAAAELPGDWVSAGKSA----QWL-WYSVYASKQVSWRTRALVVSDWTRRYIFGRDSSR 570
Query: 499 I 499
I
Sbjct: 571 I 571
>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
GN=NDB3 PE=2 SV=1
Length = 580
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 213/365 (58%), Gaps = 17/365 (4%)
Query: 39 TDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98
++A+PS YS G K +VV+LG+GWAG +K ++ S Y+V +SPRN+
Sbjct: 38 SEANPS------YSNNGVETKTRKRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFA 91
Query: 99 FTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDE 158
FTPLL S GT+E RSV EPI I A + F + C ID + V+C +
Sbjct: 92 FTPLLPSVTCGTVEARSVVEPIRNI--ARKQNVEMSFLEAECFKIDPGSKKVYCRS-KQG 148
Query: 159 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218
+ + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR ++ + +
Sbjct: 149 VNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKAS 208
Query: 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 277
+PG++E+E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+
Sbjct: 209 LPGLNEQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADH 268
Query: 278 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDGTEVPYGLLVWSTG 332
IL+ FD R+ +A + ++ G+ + G +VK D S K + + +PYG++VWSTG
Sbjct: 269 ILTMFDKRITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTG 328
Query: 333 VGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 390
+G ++K G R + DEWLRV +++A+GDC+ + + A+ +
Sbjct: 329 IGTRPVIKDFMKQIGQGNRRALATDEWLRVEGCDNIYALGDCATINQRKVMEDIAAIFKK 388
Query: 391 AERQG 395
A+++
Sbjct: 389 ADKEN 393
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 383 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGR 438
+LPA QVA +QG YL +R+ + G PF YRHLG A +G
Sbjct: 465 LLPATGQVAAQQGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGG 524
Query: 439 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 498
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD SR
Sbjct: 525 EQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSR 579
Query: 499 I 499
I
Sbjct: 580 I 580
>sp|P32340|NDI1_YEAST Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDI1 PE=1 SV=1
Length = 513
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 274/521 (52%), Gaps = 60/521 (11%)
Query: 18 YSSPSIIMPSNLILTCLSHFTTDASPSTVQLTQYSGLGPT----------KANEKPRVVV 67
YS+ ++ +N ++ S +T + SG GPT + ++KP V++
Sbjct: 7 YSNKRLLTSTNTLVRFASTRSTG--------VENSGAGPTSFKTMKVIDPQHSDKPNVLI 58
Query: 68 LGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAI 127
LGSGW +K IDT Y+V +SPR++ +FTPLL S VGT++ +S+ EPI A+
Sbjct: 59 LGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNF--AL 116
Query: 128 SREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKF---------KISYDKLVIAL 178
++ ++ + I+ D + V ++++ + +P +I YD L+ A+
Sbjct: 117 KKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAV 176
Query: 179 GAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 238
GAE +TFGI GV + FL+E+ ++ EIRR NL +++ + E+ RLL VVVGG
Sbjct: 177 GAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGG 236
Query: 239 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRLRHYATTQLSKS 297
GPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F+ +L YA + L +
Sbjct: 237 GPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENT 296
Query: 298 GVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGVGPSTLVKSL--DLPK 346
+++ +R V V+ ++L+ E +PYG L+W+TG ++ L +P+
Sbjct: 297 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPE 356
Query: 347 SPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404
+ G ++++L+V ++FA+GD + LP AQVA ++ +YL ++
Sbjct: 357 QNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQEAEYLAKNFDK 409
Query: 405 IGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLS 455
+ + + N S KD E + PF Y LG++A +G +A+ +R K + +
Sbjct: 410 MAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRT-FYT 468
Query: 456 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 496
G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 469 GGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
GN=NDB2 PE=1 SV=1
Length = 582
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 194/322 (60%), Gaps = 14/322 (4%)
Query: 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI 120
+K +VV+LG+GWAG +K ++ S Y+V +SPRN+ FTPLL S GT+E RSV EPI
Sbjct: 57 KKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPI 116
Query: 121 ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180
I + + + + C ID + V+C + L + +F + YD LVIA GA
Sbjct: 117 RNIG---RKNVDTSYLEAECFKIDPASKKVYCRS-KQGLSSNGKKEFSVDYDYLVIATGA 172
Query: 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 240
+++TF I GV+EN FL+EV AQ IR+ ++ + + +P +S+EE+ R+LH VVVGGGP
Sbjct: 173 QSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGGP 232
Query: 241 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGV 299
TGVEF+ EL DF+ D+ Y K + +TL+E A+ IL+ FD R+ +A + S+ G+
Sbjct: 233 TGVEFAAELHDFVTEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGI 292
Query: 300 RLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR-- 351
+ G + KD+ S K + + +PYG++VWSTG+G ++K G R
Sbjct: 293 DVKLGSMVTKVNEKDI-SAKTKGGEVSSIPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRA 351
Query: 352 IGIDEWLRVPSVQDVFAVGDCS 373
+ DEWLRV +++A+GDC+
Sbjct: 352 LATDEWLRVEGTDNIYALGDCA 373
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 384 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 439
LPA AQVA +QG YL +R+ + + G PF YRHLG A +G
Sbjct: 468 LPATAQVAAQQGAYLAKCFDRMEECEKSPEGPIRMRGEGRHRFRPFRYRHLGQFAPLGGE 527
Query: 440 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 499
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 528 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 582
>sp|Q9SKT7|NDB4_ARATH NAD(P)H dehydrogenase B4, mitochondrial OS=Arabidopsis thaliana
GN=NDB4 PE=1 SV=1
Length = 582
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 190/322 (59%), Gaps = 16/322 (4%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
K +VVVLGSGW+G + ++ YDV VSPRN +FTPLL S GT+E RS+ EPI
Sbjct: 63 KKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIR 122
Query: 122 RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLE-PWKFKISYDKLVIALGA 180
+ R+ G + + C ID N +HC + E +L+ +F + YD L++A+GA
Sbjct: 123 ----GLMRKKGFEYKEAECVKIDASNKKIHCRS--KEGSSLKGTTEFDMDYDILILAVGA 176
Query: 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 240
+ +TF GV+E+A FL+E A IR ++ + +P ++EEE+ ++LH VVVGGGP
Sbjct: 177 KPNTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGP 236
Query: 241 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGV 299
TGVEFS EL DF+++DV + Y V+++ +TL+EA + IL+ FD R+ +A + + G+
Sbjct: 237 TGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGI 296
Query: 300 RL-----VRGIVKD-VDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR-- 351
L V G+ D + +++ PYG++VWSTG+G ++K G R
Sbjct: 297 DLKTGSMVVGVTADEISTKERETGKIVSEPYGMVVWSTGIGSRPVIKDFMQQIGQGQRRV 356
Query: 352 IGIDEWLRVPSVQDVFAVGDCS 373
+ DEWLRV V+A+GD +
Sbjct: 357 LATDEWLRVEGCDGVYALGDTA 378
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 384 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 439
LPA AQVA +QGKYL N++ K + G PF YRH GS A +G
Sbjct: 468 LPATAQVASQQGKYLAKCFNKMEKCEKKPEGPLRFRGEGRHRFQPFRYRHFGSFAPLGGE 527
Query: 440 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 499
+ +L + S G S WL W S Y +++VSWR R V +W FVFGRD S I
Sbjct: 528 QTAAELPGDWVSIGHSS----QWL-WYSVYASKLVSWRTRMLVISDWTRRFVFGRDSSSI 582
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +VD +K LN GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSV------WAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + ++F +GDCS ++ + + LP AQ+A +QG+ + +
Sbjct: 275 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK 334
Query: 404 RI 405
RI
Sbjct: 335 RI 336
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 45/407 (11%)
Query: 89 VCVSPRNH-MVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDN 147
+ + RNH ++ PLL G+L+ + ++ + A +R G F L ID +
Sbjct: 36 ITLVDRNHSHLWKPLLHEVATGSLD--EGVDALSYL--AHARNHGFQFQLGSVIDIDREA 91
Query: 148 HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 207
+ + DE L + KI+YD LV+ALG+ ++ F GVKEN FL H A+
Sbjct: 92 KTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFH 151
Query: 208 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH---- 263
++ +LNL L + K ++ +VGGG TGVE S EL + V+Q +S+
Sbjct: 152 QE-MLNLFLKYSANLGANGK---VNIAIVGGGATGVELSAELHN----AVKQLHSYGYKG 203
Query: 264 -VKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT 320
+ ++VTL+EA E IL + R+ A +L+K GVR L + +V D L DG
Sbjct: 204 LTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGE 263
Query: 321 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGG--RIGIDEWLRVPSVQ-----DVFAVGDCS 373
+ L+VW+ G +K+ D K GG I++ + P++Q D++A+GDC+
Sbjct: 264 YIEADLMVWAAG------IKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCA 317
Query: 374 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM 433
G V P AQ A + ++ N + + G + + Y+ GS+
Sbjct: 318 SCPRPEGGFV-PPRAQAAHQMAT--CAMNNILAQMNGKPLKN---------YQYKDHGSL 365
Query: 434 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 480
++ + + L N + + G ++ V+ S Y ++ F
Sbjct: 366 VSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYF 412
>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
Length = 402
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + D+ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADEADITLINKNKYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ PI ++ +E F + ID + + +E YD L
Sbjct: 62 DLIYPI----ESVIKEDKVKFINAEVTKIDRN------------AKKVETNHGIYDYDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG E+ TFGI+G+K+ A + + A+++ R + S+E+ + L +
Sbjct: 106 VVALGFESETFGINGMKDYAFQIENIETARKLSRHIEDKFANY---AASKEKDDKDLAIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL++ I ++ +Y ++ + VT +EA ++L F D L +YA
Sbjct: 163 VGGAGFTGIEFLGELTERI-PELCNKYGVDQNKVRVTCVEAAPKMLPMFSDELVNYAVNY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V ++ Q+ L GT +W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVKINDQEQQLEAGT------AIWAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + D+F +GD S ++ + + LP AQ+A +QG+++ +
Sbjct: 275 FEGVKRGRIVTKQDLTIEGHDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGEHVAKSIK 334
Query: 404 RI 405
I
Sbjct: 335 NI 336
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + ++ ++ + + L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ + +++ + F ++ ID + + +E K +D L
Sbjct: 62 DLLYPV---EKTVNKNKVN-FVVAEVTKIDRN------------AKRVETDKGVYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+KE+A + V ++++ R + S+E+ + L +
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANY---AASKEKDDKDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL+D I ++ +Y + + +T +EA ++L F D L YA
Sbjct: 163 VGGAGFTGIEFLGELTDRI-PELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +V+ +K L GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVNGEKQQLEAGTSV------WTAGVRGSHLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + D+F +GDCS ++ + + LP AQ+A +QG++ S +
Sbjct: 275 FEGVKRGRIINKQDLTIEGHNDIFVIGDCSAFIPADEERPLPTTAQIAMQQGEHTASNIK 334
Query: 404 RI 405
R+
Sbjct: 335 RL 336
>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
SV=1
Length = 402
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 171/362 (47%), Gaps = 42/362 (11%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + ++ ++ + + L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ + ++++ + F ++ ID + + +E K +D L
Sbjct: 62 DLLYPV---EKTVNKDKVN-FVVAEVTKIDRN------------AKRVETDKGVYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+KE+A + V ++++ R + S+E+ + L +
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANY---AASKEKDDKDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL+D I ++ +Y + + +T +EA ++L F D L YA
Sbjct: 163 VGGAGFTGIEFLGELTDRI-PELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V +V+ +K L GT V W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVNGEKQQLEAGTSV------WTAGVRGSHLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GR+ + L + D+F +GDCS ++ + + LP AQ+A +QG++ S +
Sbjct: 275 FEGVKRGRVINKQDLTIEGHNDIFVIGDCSAFIPAGEERPLPTTAQIAMQQGEHTASNIK 334
Query: 404 RI 405
R+
Sbjct: 335 RL 336
>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1834 PE=3 SV=1
Length = 402
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 178/402 (44%), Gaps = 59/402 (14%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I +V ++ ++ L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTITKLQKQISADEAEVTLINKNDYHYEATWLHEASAGTISYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ ++ + F + ID + V + +D L
Sbjct: 62 DLLYPV----ESVVNKDKVNFVKAEVTKIDRNAKKVETDAGI------------FDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V++LG E+ TFGI G+K+ A + V A+++ R + S+++ + L +
Sbjct: 106 VVSLGFESETFGIKGMKDYAFQIENVLTARKLSRHIEDKFANY---ASSKQKDDKDLAII 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y + + +T +EA ++L F D L ++A
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCNKYGVEQSKVKITCVEAAPKMLPMFSDELVNHAVNY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343
L GV +G V V+ ++ L T +VW+ GV S L++
Sbjct: 222 LENKGVEFKIGTPIVAANEKGFVVKVNDEEQQLEANT------VVWAAGVRGSKLMEE-S 274
Query: 344 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403
GRI + L + D+F +GDCS ++ + + LP AQ+A +QG++
Sbjct: 275 FEGVKRGRIVTKQDLTIEGYDDIFVIGDCSAFIPAGEERPLPTTAQIATQQGEHT----- 329
Query: 404 RIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKAL 442
A + K++ G P F Y G++ ++G + +
Sbjct: 330 ---------AKNVKNILEGQPTNEFEYVDRGTVCSLGAHDGV 362
>sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1
Length = 444
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 38/322 (11%)
Query: 168 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL-LNLMLSD---VPGIS 223
+I YD LVIA+G++++ F GV +N FL A + KLL L L S+ + I
Sbjct: 108 RIPYDYLVIAIGSKSNDFNTKGVADNCIFLDSSKQALRFQHKLLELFLKFSENRALDDIG 167
Query: 224 EEE-KSRL-----LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK---DYIHVTLIE 274
EEE K +L ++ +VGGG TGVE + EL + + Y + K + VTL+E
Sbjct: 168 EEEFKQKLVDENKVNIAIVGGGATGVELTAEL--YHAAEDLSSYGYGKIDSSCLQVTLVE 225
Query: 275 A-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 332
A +L + + L +L + G + + ++ + LI DG E+ L+VW+ G
Sbjct: 226 AGTRLLPALPENLSAAVLDELKEMGTNVQLNTMITEAQPNTLITKDGGEIKADLIVWAAG 285
Query: 333 VGPSTLVKSLD-LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP---ALA 388
V ST+ + D L + ++ + + L+ +FA+GDC+ ++S GK V P A
Sbjct: 286 VRASTVTQQFDGLEINRINQLVVKDTLQTTVDDSIFAIGDCAALIQSNGKLVPPRAQAAH 345
Query: 389 QVAERQGKYLFSLL-NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 447
Q+A+ K +F+L N+ K+ F Y G++ ++ + AL L
Sbjct: 346 QMAKACAKNIFALFENKPLKS----------------FKYNDKGTLVSLSNFTALGSLTN 389
Query: 448 NKESKGLSLAGFLSWLVWRSAY 469
L++ G + + S Y
Sbjct: 390 KFGKNPLTVQGKFAQFAYVSLY 411
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 176/391 (45%), Gaps = 42/391 (10%)
Query: 62 KPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA 117
KP++V+LG+G+ G RL K + + D+ V+ N+ T + GTL
Sbjct: 5 KPKIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTWMHEASAGTLHHDRCR 64
Query: 118 EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIA 177
+I+ I++ + F I D V ++ YD LVI
Sbjct: 65 ---YQIKDVINQSRVN-FVQDTVKAIKIDEKKVVLAN------------GELQYDYLVIG 108
Query: 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 237
LGA TFGI G+KE A + ++ ++ +R + L + E++ L VV G
Sbjct: 109 LGAVPETFGIKGLKEYAFPIANINTSRLLREHIELQFATYNT---EAEKRPDRLTIVVGG 165
Query: 238 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296
G TG+EF GEL+ + ++ + Y + + + +EA +L FD L YA L +
Sbjct: 166 AGFTGIEFLGELAARV-PELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEE 224
Query: 297 SGVRLVRGI-VKDVDSQKLILNDGTEVPYGL----LVWSTGVGPSTLVKSLDLPKSPGGR 351
+GV G V++ + + + E P + +VW+ GV +V+ ++ GR
Sbjct: 225 NGVEFKIGTAVQECTPEGVRVGKKDEEPEQIKSQTVVWAAGVRGHPIVEEAGF-ENMRGR 283
Query: 352 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 411
+ ++ LR P +VF +GD S ++ + P AQ+A +QG + L R+ K G
Sbjct: 284 VKVNPDLRAPGHDNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLGRLIKGG-- 341
Query: 412 RANSAKDMELGDPFVYRHLGSMATIGRYKAL 442
++E P + G++A++G + A+
Sbjct: 342 ------ELEEFKPDIK---GTVASLGEHNAV 363
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 195/463 (42%), Gaps = 80/463 (17%)
Query: 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY------DVVCVSPRNHMVFTPLLASTCVGTLEF 113
N++PRV +LG G+ G +++ ++ VV V VF P+L G ++
Sbjct: 78 NKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSGEVDV 137
Query: 114 RSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNH--VVHCE-TVTDELRTLEPWKFKIS 170
+A + + G F + +H V E +VT LE FKI
Sbjct: 138 WEIAPRFSDLL----TNTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLES-GFKIE 192
Query: 171 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 230
YD LV+ALGAE+ + G E A + A + KL S+ E+
Sbjct: 193 YDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKL------------SKLERKNF 240
Query: 231 -----LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 285
+ VVG G GVE + +S+ R + + I+V+ IL+S D
Sbjct: 241 KDGSAIKVAVVGCGYAGVELAATISE------RLQDRGIVQSINVS----KNILTSAPDG 290
Query: 286 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILND------------GTE---VPYGLLVW 329
R A L+ V+L+ G +V+ + + D G E + +++W
Sbjct: 291 NREAAMKVLTSRKVQLLLGYLVQSIKRASNLEEDEGYFLELQPAERGLESQIIEADIVLW 350
Query: 330 STGVGPSTLVKSLD------LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 383
+ G P L+ L+ LP + G+ DE LRV +FA+GD S +S GK +
Sbjct: 351 TVGAKP--LLTKLEPSGPNVLPLNARGQAETDETLRVKGHPRIFALGDSSSLRDSNGK-I 407
Query: 384 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 443
LP AQVA ++ + G +A + PF +++LG M T+GRY A +
Sbjct: 408 LPTTAQVAFQEADFT-----------GWNIWAAINNRPLLPFRFQNLGEMMTLGRYDAAI 456
Query: 444 DLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 486
+GL+L G + + AYL R+ + +RF V ++W
Sbjct: 457 ---SPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRFKVGISW 496
>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
168) GN=yjlD PE=1 SV=3
Length = 392
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 178/397 (44%), Gaps = 54/397 (13%)
Query: 65 VVVLGSGWAGC------RLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAE 118
+V+LG+G+ G R + + VV P H + T L G + ++VA
Sbjct: 5 IVILGAGYGGVLSALTVRKHYTKEQARVTVVNKYP-THQIITEL-HRLAAGNVSEKAVAM 62
Query: 119 PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVT-DELRTLEPWKFKISYDKLVIA 177
P+ ++ G D D + + + D+ ++YD LV+
Sbjct: 63 PLEKL----------------FKGKDIDLKIAEVSSFSVDKKEVALADGSTLTYDALVVG 106
Query: 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 237
LG+ + FGI G++EN+ L+ A ++ + + V S+ + ++ G
Sbjct: 107 LGSVTAYFGIPGLEENSMVLKSAADANKVFQH-----VEDRVREYSKTKNEADATILIGG 161
Query: 238 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296
GG TGVE GEL+D IM ++ ++Y I + L+EA +IL D L AT L K
Sbjct: 162 GGLTGVELVGELAD-IMPNLAKKYGVDHKEIKLKLVEAGPKILPVLPDDLIERATASLEK 220
Query: 297 SGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGID 355
GV + G+ V +V+ + L DG++V VW+ GV + LV L + GR ++
Sbjct: 221 RGVEFLTGLPVTNVEGNVIDLKDGSKVVANTFVWTGGVQGNPLVGESGLEVNR-GRATVN 279
Query: 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY----LFSLLNRIGKAGGG 411
++L+ S +DVF GD + Y G+ P AQ+A + G+ LF+ L
Sbjct: 280 DFLQSTSHEDVFVAGDSAVYFGPDGRP-YPPTAQIAWQMGELIGYNLFAYL--------- 329
Query: 412 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 448
K +E P + G++A++GR A+ + N
Sbjct: 330 ---EGKTLETFKPV---NSGTLASLGRKDAVAIIGAN 360
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 36/238 (15%)
Query: 169 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 228
ISYD +I LG E + G E ++ + ++E +KL S
Sbjct: 94 ISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKL--------------NNLS 139
Query: 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 287
+VG G +GVE + EL + +D +++ L + N ILSSF +RL
Sbjct: 140 ANATVAIVGAGLSGVELASELRE------------SRDDLNIILFDRGNLILSSFPERLS 187
Query: 288 HYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 346
Y + GVR++ R + V+ + ++ N + +VW+ G+ P+ +V+ LD+ K
Sbjct: 188 KYVQKWFEEHGVRIINRANITKVE-EGVVYNHDDPISADAIVWTAGIQPNKVVRDLDVEK 246
Query: 347 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404
GRI + +P + ++ VGDC+ + AQ+AE Q + + +L +
Sbjct: 247 DAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPS-------AQLAEAQAEQIVQILQK 297
>sp|Q58065|NAOX_METJA Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0649 PE=3 SV=2
Length = 448
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 61/350 (17%)
Query: 64 RVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
R +++GSG AG I D +V ++ + ++P A V +S + I
Sbjct: 2 RAIIIGSGAAGLTTASTIRKYNKDMEIVVITKEKEIAYSPC-AIPYVIEGAIKSFDDIIM 60
Query: 122 RIQPAISREPGSYFFLSHCAGIDTD--NHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179
RE + L+ ID D N+ + C D+ + +F+++YD LV+A G
Sbjct: 61 HTPEDYKRER-NIDILTETTVIDVDSKNNKIKC---VDK----DGNEFEMNYDYLVLATG 112
Query: 180 AEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 238
AE I G + F +R + + I + + E++ VVG
Sbjct: 113 AEPFIPPIEGKDLDGVFKVRTIEDGRAILKYI---------------EENGCKKVAVVGA 157
Query: 239 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF-DDRLRHYATTQLSK 296
G G+E + Y + V ++E A ++L F D + L K
Sbjct: 158 GAIGLEMA--------------YGLKCRGLDVLVVEMAPQVLPRFLDPDMAEIVQKYLEK 203
Query: 297 SGVR--LVRGIVKDVDSQKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRI 352
G++ L + + K V +K+ + DG +++ +TGV P +++L K G +I
Sbjct: 204 EGIKVMLSKPLEKIVGKEKVEAVYVDGKLYDVDMVIMATGVRP-----NIELAKKAGCKI 258
Query: 353 G-----IDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQGK 396
G ++E ++ S+ +++AVGDC ++ TG+ L A RQGK
Sbjct: 259 GKFAIEVNEKMQT-SIPNIYAVGDCVEVIDFITGEKTLSPFGTAAVRQGK 307
>sp|Q9LK94|MDAR2_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 2
OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1
Length = 488
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 44/220 (20%)
Query: 169 ISYDKLVIALGAEA---STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 224
ISY L+IA GA A FG+ G EN +LR++ A L ++ S G
Sbjct: 112 ISYKFLIIATGARALKLEEFGVEGSDAENVCYLRDLADANR-----LATVIQSSSNG--- 163
Query: 225 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI--EANEILSSF 282
+ VV+GGG G+E + L V + I+VT++ EA+ + F
Sbjct: 164 -------NAVVIGGGYIGMECAASL--------------VINKINVTMVFPEAHCMARLF 202
Query: 283 DDRLRHYATTQLSKSGVRLVRGIVK---DVDSQKLI----LNDGTEVPYGLLVWSTGVGP 335
++ GV+ ++G V + DS K + L DG+ +P L+V G+ P
Sbjct: 203 TPKIASLYEDYYRAKGVKFIKGTVLTSFEFDSNKKVTAVNLKDGSHLPADLVVVGIGIRP 262
Query: 336 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 375
+T + L GG I ++ ++ S V+A+GD + +
Sbjct: 263 NTSLFEGQLTIEKGG-IKVNSRMQ-SSDSSVYAIGDVATF 300
>sp|P48640|GSHRP_SOYBN Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1
Length = 544
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
++ + +VGGG +EF+G ++ +K +HV I ++L FD+ +R
Sbjct: 236 TKPVKIAIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIR 282
Query: 288 HYATTQLSKSGVRL-----VRGIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPSTL--- 338
+ Q+S G+ + I K D S L N GT + ++++TG P+T
Sbjct: 283 DFVEEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNTQNLG 342
Query: 339 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 379
++S+ + + G I +DE+ + SV ++AVGD + + T
Sbjct: 343 LESVGVKLAKDGAIEVDEYSQT-SVYSIWAVGDVTNRINLT 382
>sp|P52923|AIF1_YEAST Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1
Length = 378
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 224 EEEKSRLL---HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 280
E E SR+ H + +GGG E +GEL + ++R + IH ++++L
Sbjct: 128 EREASRISDADHILFLGGGFVNCELAGELLFKYLEEIRSGKKRIS-IIH----NSDKLLP 182
Query: 281 S---FDDRLRHYATTQLSKSGVRLVRGIVK---DVDSQKLILNDGTE--VPYGLLVWSTG 332
++D LR T LSK+G+ L V D +++ L +G+ + L+ G
Sbjct: 183 DSGLYNDTLRKNVTDYLSKNGITLYLNTVGASLDTSPKRIFLGEGSSKYIDADLIYRGVG 242
Query: 333 VGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQ--DVFAVGDCSGY 375
+ P+ V S+ G I +++ RV +V+ +VFA+GD + +
Sbjct: 243 ISPNVPVNSISDLCDKKGFIQVEKNFRVKAVEAGNVFAIGDVTNF 287
>sp|P27456|GSHRP_PEA Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum
GN=GR PE=2 SV=1
Length = 552
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
S+ +VGGG +EF+G ++ +K +HV I ++L FD+ +R
Sbjct: 244 SKPQKIAIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIR 290
Query: 288 HYATTQLSKSGVRLVR-----GIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPSTL--- 338
+ ++ G+ I K D S L N GTE + ++++TG P+T
Sbjct: 291 DFVAENMALRGIEFHTEESPVAITKAADGSLSLKTNKGTEEGFSHIMFATGRSPNTKDLG 350
Query: 339 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 388
++S+ + + G I +DE+ + SV ++A+GD + + T ++ +A
Sbjct: 351 LESVGVKVAKDGSIEVDEYSQT-SVPSIWAIGDATNRVNLTPVALMEGVA 399
>sp|P80461|GSHRP_TOBAC Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana
tabacum GN=GOR PE=1 SV=1
Length = 557
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293
+VGGG +EF+G ++ +K +HV I ++L FD+ +R + Q
Sbjct: 256 AIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIRDFVGEQ 302
Query: 294 LSKSGVRL-----VRGIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPSTL---VKSLDL 344
+S G+ + IVK D S L + GT + ++++TG P+T ++++ +
Sbjct: 303 MSLRGIEFHTEESPQAIVKSADGSLSLKTSRGTVEGFSHIMFATGRRPNTKNLGLETVGV 362
Query: 345 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 379
+ G I +DE+ R SV ++AVGD + + T
Sbjct: 363 KMTKNGAIEVDEYSRT-SVPSIWAVGDVTDRINLT 396
>sp|Q9GRX6|AIFM1_DICDI Apoptosis-inducing factor 1, mitochondrial OS=Dictyostelium
discoideum GN=aif PE=2 SV=1
Length = 532
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 169 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 228
I YDK +IA G E R++ +K+ + D + E K
Sbjct: 206 IRYDKCLIATGGEP---------------RQLKFTSTNDKKISTYRTVEDFRKLYEVVKD 250
Query: 229 RLLHCVVVGGGPTGVEFSGEL-SDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
H V+GGG G E + + S+F ++++ I E+ + + F D L
Sbjct: 251 GGKHVTVLGGGFLGSELTCAINSNFQDKNIK---------IDQIFPESGVLSTLFPDYLS 301
Query: 288 HYATTQLSKSGVR-----LVRGIVKDVDSQKL--ILNDGTEVPYGLLVWSTGVGPST-LV 339
YAT ++ KSGV L++ +V + ++ +L LN+G +V + G+ P+T +V
Sbjct: 302 KYATEEIIKSGVNVHTGTLIKDVVDNSENGRLTVTLNNGKTFETDHVVVAAGIIPNTNVV 361
Query: 340 KSLDLPKSP--GGRIGIDEWLRVPSVQ---DVFAVGDCSGYLE 377
KS L P GG ++ P +Q D++ GD + Y +
Sbjct: 362 KSTTLEIDPINGG------YVVNPELQARTDLYVAGDVASYYD 398
>sp|P39050|TYTR_LEIDO Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1
Length = 491
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 224 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD 283
E+ R+L VGGG VEF+G + Y Y+ + + IL FD
Sbjct: 185 EDAPKRML---CVGGGYIAVEFAG---------IFNGYKPCGGYVDLCY-RGDLILRGFD 231
Query: 284 DRLRHYATTQLSKSGVRLVRG-----IVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPST 337
+R T QL +G+R+ I K+ D S + NDGTE Y ++ + GV P +
Sbjct: 232 TEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGV-PRS 290
Query: 338 LVKSLD---LPKSPGGRIGIDEWLRVPSVQDVFAVGD 371
LD + G + +D + + SV +++A+GD
Sbjct: 291 QALQLDKAGVRTGKNGAVQVDAYSKT-SVDNIYAIGD 326
>sp|P16640|CAMA_PSEPU Putidaredoxin reductase OS=Pseudomonas putida GN=camA PE=1 SV=1
Length = 422
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 51/223 (22%)
Query: 169 ISYDKLVIALGAEASTF----GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 224
+ YD+LV+A G G G N +LR + A+ IRR+L+ +
Sbjct: 101 LDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIAD----------- 149
Query: 225 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEIL---- 279
+RL VV+GGG G+E + + +K +HVTL++ A +L
Sbjct: 150 ---NRL---VVIGGGYIGLEVAA--------------TAIKANMHVTLLDTAARVLERVT 189
Query: 280 ----SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQK---LILNDGTEVPYGLLVWSTG 332
S+F + L A + ++G + V G D QK ++ DGT +P L++ G
Sbjct: 190 APPVSAFYEHLHREAGVDI-RTGTQ-VCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247
Query: 333 VGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 375
+ P+ + S + G I I+E ++ S + AVGDC+ +
Sbjct: 248 LIPNCELASAAGLQVDNG-IVINEHMQT-SDPLIMAVGDCARF 288
>sp|A8ANR8|NORW_CITK8 Nitric oxide reductase FlRd-NAD(+) reductase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=norW
PE=3 SV=1
Length = 377
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 88/346 (25%)
Query: 65 VVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQ 124
+V++GSG+A +L+K I ++ V L+A+ + ++ I++ Q
Sbjct: 5 IVIIGSGFAARQLVKNI----------RKQDATVALTLIAADSMDEYNKPDLSHVISQAQ 54
Query: 125 PA--ISREPGSYF-------FLSHC--AGIDTDNHVVHCETVTDELRTLEPWKFKISYDK 173
A ++R+ F H ID D HVV + + W+F DK
Sbjct: 55 RADDLTRQSAGEFAEQFNLRLFPHTWITDIDADAHVVKSQD--------KQWQF----DK 102
Query: 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 233
LV+A GA A + G R+L+L L E +
Sbjct: 103 LVLATGASAFVPPVAG------------------RELMLTLNSQQEYRACETQLRDAQRV 144
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF-----DDRLR 287
++VGGG G E + DF + VTLI+ A IL+S RL+
Sbjct: 145 LIVGGGLIGSELA---MDF-----------CRAGKAVTLIDNAASILASLMPPEVSSRLQ 190
Query: 288 HYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKS 341
H +L+ GV L ++G+ K + L+ +V ++ +TG+ P T L +
Sbjct: 191 H----RLTDMGVHLLLKSQLQGLEKTATGIRATLDRDRQVEVDAVIAATGLRPETALARR 246
Query: 342 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 387
L + G + +D +L+ S D++A+GDC+ E G+ VLP L
Sbjct: 247 AGLTINRG--VCVDSYLQT-SHPDIYALGDCA---EINGQ-VLPFL 285
>sp|P48639|GSHR_BURCE Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1
Length = 449
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQL 294
++GGG EF+G + HV V L +++L FDD LR + +L
Sbjct: 172 IIGGGYIACEFAGIFNGL--------GRHV-----VQLHRGSQVLRGFDDELREHLGDEL 218
Query: 295 SKSGVRLVRGI-VKDVDSQK----LILNDGTEVPYGLLVWSTGVGPSTL---VKSLDLPK 346
KSG+ L G+ V V+ Q+ + L G + ++ +TG P+T ++++D+
Sbjct: 219 KKSGIDLRLGVDVVAVERQRGALSVQLTTGDAMEVDAVMAATGRLPNTWGLGLETVDVGL 278
Query: 347 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 379
G I +DE+ R S ++AVGD + L T
Sbjct: 279 DQNGAIKVDEYSRTSS-PGIYAVGDVTNRLNLT 310
>sp|P28593|TYTR_TRYCR Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1
Length = 492
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 25/168 (14%)
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATT 292
+ VGGG VEF+G + + +D + VTL E IL FD LR T
Sbjct: 193 LTVGGGFISVEFAGIFNAYKPKDGQ-----------VTLCYRGEMILRGFDHTLREELTK 241
Query: 293 QLSKSGVRLVR-----GIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 346
QL+ +G++++ + + D S+ + G ++ + L++ + G P T K L L
Sbjct: 242 QLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRT--KDLQLQN 299
Query: 347 S----PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 390
+ G + +DE+ R +V +++A+GD + + T + A A V
Sbjct: 300 AGVMIKNGGVQVDEYSRT-NVSNIYAIGDVTNRVMLTPVAINEAAALV 346
>sp|P42433|NASB_BACSU Assimilatory nitrate reductase electron transfer subunit
OS=Bacillus subtilis (strain 168) GN=nasB PE=2 SV=2
Length = 771
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 68/354 (19%)
Query: 61 EKPRVVVLGSGWAGCRLMKGI---DTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA 117
+K R+V+ G+G AG R ++ + + ++++V H + +L S+ L+ +
Sbjct: 2 KKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYNRILLSS---VLQGEASL 58
Query: 118 EPIARIQPAISREPGSYFFLSHCA-GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176
+ I + G + IDTD V +TD RTL SYDKL++
Sbjct: 59 DDITLNSKDWYDKHGITLYTGETVIQIDTDQQQV----ITDRKRTL-------SYDKLIV 107
Query: 177 ALGAEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVV 235
A G+ I G + + R + Q L+N+ V
Sbjct: 108 ATGSSPHILPIPGADKKGVYGFRTIEDCQA-----LMNM------------AQHFQKAAV 150
Query: 236 VGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295
+G G G+E + L M DV IH + A + D T+L
Sbjct: 151 IGAGLLGLEAAVGLQHLGM-DV--------SVIHHS---AGIMQKQLDQTAARLLQTELE 198
Query: 296 KSGVRLVR-----GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGG 350
+ G+ + I + ++ DG+ + L+V + GV P +++L S G
Sbjct: 199 QKGLTFLLEKDTVSISGATKADRIHFKDGSSLKADLIVMAAGVKP-----NIELAVSAGI 253
Query: 351 RIG----IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 400
++ ++++++ S +++AVG+C+ E G TV +A + E QGK L S
Sbjct: 254 KVNRGIIVNDFMQT-SEPNIYAVGECA---EHNG-TVYGLVAPLYE-QGKALAS 301
>sp|Q10499|AIF1_SCHPO Apoptosis-inducing factor 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=aif1 PE=3 SV=3
Length = 611
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 133 SYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-K 191
S+ F + ID ++C + DE T SY KL++A G E + I G+
Sbjct: 262 SFHFNTDVTKIDLAEKKIYCGS--DEKPTE-------SYTKLILATGGEPNKLPIPGLDS 312
Query: 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSD 251
+N LR + A S + ++ E + + V++G G+E + L D
Sbjct: 313 KNVYLLRSIADA-------------SKLAAVTTEAGDK-KNIVIIGSSFIGLELAVVLKD 358
Query: 252 FIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD- 310
+ + + I + E+ ++ ++ ++ V+ D
Sbjct: 359 HNVSVIGM------ESIPFEKVMGKEVGTALKALHEQNGIAFYLENSIKEVKTSSNDSSK 412
Query: 311 SQKLILNDGTEVPYGLLVWSTGVGPST--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368
++ ++L DG +P +++ + GV P+ L ++ L K G + +DE RV +DV+A
Sbjct: 413 AEHIVLKDGQSIPADVVILAAGVKPNLRYLGNAVSLEKD--GGVKVDEHCRVLGAEDVYA 470
Query: 369 VGD 371
VGD
Sbjct: 471 VGD 473
>sp|P48642|GSHRC_ORYSJ Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica
GN=GRC2 PE=2 SV=2
Length = 496
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRLRHYA 290
V++GGG VEF+ I + + HV L E+ L FDD +R
Sbjct: 202 RAVILGGGYIAVEFAS-----IWKGMGA---------HVDLFYRKELPLRGFDDEMRTVV 247
Query: 291 TTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 345
+ L G+RL G + K D K++ + G E+ +++++TG P++ +L+
Sbjct: 248 ASNLEGRGIRLHPGTNLSELSKTADGIKVVTDKGEEIIADVVLFATGRTPNSQRLNLEAA 307
Query: 346 KSPGGRIG---IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 386
IG +D++ R SV +++AVGD + + T ++ A
Sbjct: 308 GVEVDNIGAIKVDDYSRT-SVPNIWAVGDVTNRINLTPVALMEA 350
>sp|P37062|NAPE_ENTFA NADH peroxidase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=npr PE=1 SV=2
Length = 447
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 170 SYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 228
+YDKL+I+ GA I G +N +R A ++++K +
Sbjct: 103 NYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV---------------DP 147
Query: 229 RLLHCVVVGGGPTGVE----FSGELSDFIMRDVRQRYSHV---KDYIHVTL--IEANEIL 279
+ + VV+G G G+E F+ + D+ R V K++ V +EAN I
Sbjct: 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNIT 207
Query: 280 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 339
+ + + Y G V+ IV D ++ L+V + GV P+T
Sbjct: 208 IATGETVERY-------EGDGRVQKIVTDKNAYDA----------DLVVVAVGVRPNTAW 250
Query: 340 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT-VLPALAQVAERQGKY 397
L P G I DE++R S DVFAVGD + + T V ALA A +QG++
Sbjct: 251 LKGTLELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRF 308
>sp|P09063|DLDH1_PSEPU Dihydrolipoyl dehydrogenase OS=Pseudomonas putida GN=lpdV PE=1 SV=1
Length = 459
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 36/186 (19%)
Query: 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYA 290
H VVVGGG G+E ++ K V+++EA E IL ++D L
Sbjct: 174 HLVVVGGGYIGLELG--------------IAYRKLGAQVSVVEARERILPTYDSELTAPV 219
Query: 291 TTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGL----LVWSTGVGPSTL---VKSL 342
L K G+ L G V+ ++ L+ NDG L ++ + G P T ++ L
Sbjct: 220 AESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECL 279
Query: 343 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 402
DL K G I IDE + S+ +V+A+GD +G P LA A QG+ + ++
Sbjct: 280 DL-KMNGAAIAIDERCQT-SMHNVWAIGDVAGE---------PMLAHRAMAQGEMVAEII 328
Query: 403 NRIGKA 408
GKA
Sbjct: 329 A--GKA 332
>sp|B7NSJ1|NORW_ECO7I Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=norW PE=3 SV=1
Length = 377
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 144/353 (40%), Gaps = 102/353 (28%)
Query: 65 VVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQ 124
+V++GSG+A +L+K I ++ + L+A+ + ++ I++ Q
Sbjct: 5 IVIIGSGFAARQLVKNI----------RKQDASIPLTLIAADSMDEYNKPDLSHVISQGQ 54
Query: 125 PA--ISREPGSYF-------FLSH--CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDK 173
A ++R+ F H ID + HVV + W+ YDK
Sbjct: 55 RADDLTRQTAGEFAEQFNLRLFPHTWVTDIDAEAHVVKSQN--------NQWQ----YDK 102
Query: 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 233
LV+A GA A + G R+L+L L E +
Sbjct: 103 LVLATGASAFVPPVPG------------------RELMLTLNSQQEYRACETQLRDARRV 144
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF-----DDRLR 287
++VGGG G+E + DF + VTLI+ A IL+S RL+
Sbjct: 145 LIVGGGLIGIELA---MDF-----------CRAGKAVTLIDNAASILASLMLPEVSSRLQ 190
Query: 288 HYATTQLSKSGVRLV------------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335
H +L++ GV L+ GI+ +D Q+ I D ++ +TG+ P
Sbjct: 191 H----RLTEMGVHLLLKSQLQGLEKTDSGILATLDRQRSIEVDA-------VIAATGLRP 239
Query: 336 ST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 387
T L + L + G + +D +L+ S D++A+GDC+ E G+ VLP L
Sbjct: 240 ETALARRAGLTINRG--VCVDSYLQT-SNADIYALGDCA---EINGQ-VLPFL 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,513,345
Number of Sequences: 539616
Number of extensions: 8132765
Number of successful extensions: 20433
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 20171
Number of HSP's gapped (non-prelim): 248
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)