Query 010845
Match_columns 499
No_of_seqs 482 out of 3941
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:28:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 7.3E-74 2.5E-78 594.4 39.8 428 60-498 40-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 3.6E-52 1.2E-56 425.5 31.4 391 63-497 3-423 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 2.2E-44 7.5E-49 369.0 29.9 379 62-490 4-417 (437)
4 4eqs_A Coenzyme A disulfide re 100.0 2E-43 6.9E-48 361.0 33.7 300 63-404 1-310 (437)
5 3h28_A Sulfide-quinone reducta 100.0 9.3E-43 3.2E-47 356.3 30.9 370 63-482 3-399 (430)
6 3klj_A NAD(FAD)-dependent dehy 100.0 4.5E-43 1.5E-47 352.2 24.1 307 60-440 7-321 (385)
7 1xhc_A NADH oxidase /nitrite r 100.0 3.9E-42 1.3E-46 343.6 28.6 282 63-403 9-295 (367)
8 3ef6_A Toluene 1,2-dioxygenase 100.0 4.1E-42 1.4E-46 349.1 27.9 316 63-439 3-334 (410)
9 3vrd_B FCCB subunit, flavocyto 100.0 1.3E-42 4.4E-47 352.3 24.0 350 62-468 2-385 (401)
10 3lxd_A FAD-dependent pyridine 100.0 1.4E-41 4.8E-46 346.0 30.3 320 61-439 8-346 (415)
11 3h8l_A NADH oxidase; membrane 100.0 2.1E-41 7.3E-46 344.1 30.5 306 62-407 1-336 (409)
12 3fg2_P Putative rubredoxin red 100.0 4E-41 1.4E-45 341.3 30.0 317 63-439 2-335 (404)
13 2gqw_A Ferredoxin reductase; f 100.0 9E-41 3.1E-45 338.9 28.2 314 62-438 7-333 (408)
14 3iwa_A FAD-dependent pyridine 100.0 1.3E-40 4.3E-45 344.6 25.8 306 62-403 3-327 (472)
15 3ntd_A FAD-dependent pyridine 100.0 6.9E-40 2.4E-44 346.9 29.5 302 62-403 1-336 (565)
16 3ics_A Coenzyme A-disulfide re 100.0 2.3E-39 7.9E-44 344.0 32.0 304 60-403 34-351 (588)
17 3kd9_A Coenzyme A disulfide re 100.0 8.2E-40 2.8E-44 336.3 27.1 298 62-403 3-313 (449)
18 2bc0_A NADH oxidase; flavoprot 100.0 4.2E-39 1.4E-43 334.3 30.1 297 62-403 35-359 (490)
19 3cgb_A Pyridine nucleotide-dis 100.0 1.4E-38 4.7E-43 329.6 32.9 302 62-403 36-351 (480)
20 2cdu_A NADPH oxidase; flavoenz 100.0 7.6E-39 2.6E-43 329.4 28.4 298 63-403 1-315 (452)
21 1q1r_A Putidaredoxin reductase 100.0 4.3E-39 1.5E-43 328.7 26.3 293 62-403 4-317 (431)
22 1nhp_A NADH peroxidase; oxidor 100.0 5.5E-38 1.9E-42 322.5 29.5 299 63-403 1-314 (447)
23 2v3a_A Rubredoxin reductase; a 100.0 3.3E-38 1.1E-42 317.8 26.3 287 62-403 4-304 (384)
24 3oc4_A Oxidoreductase, pyridin 100.0 2.2E-38 7.7E-43 325.8 24.9 295 63-403 3-312 (452)
25 1m6i_A Programmed cell death p 100.0 2.7E-38 9.3E-43 328.0 22.1 320 61-431 10-367 (493)
26 2wpf_A Trypanothione reductase 100.0 7E-37 2.4E-41 317.5 24.6 289 62-403 7-353 (495)
27 1mo9_A ORF3; nucleotide bindin 100.0 3.4E-37 1.2E-41 322.3 22.3 312 61-440 42-404 (523)
28 3f8d_A Thioredoxin reductase ( 100.0 7.7E-37 2.6E-41 300.1 21.9 288 62-408 15-318 (323)
29 3l8k_A Dihydrolipoyl dehydroge 100.0 7.8E-37 2.7E-41 315.4 22.5 315 62-439 4-361 (466)
30 3fbs_A Oxidoreductase; structu 100.0 3.5E-37 1.2E-41 299.0 18.7 280 63-407 3-292 (297)
31 1zmd_A Dihydrolipoyl dehydroge 100.0 4.7E-37 1.6E-41 317.9 20.7 313 62-439 6-370 (474)
32 3qfa_A Thioredoxin reductase 1 100.0 2.9E-36 1E-40 314.7 26.8 288 61-403 31-378 (519)
33 2hqm_A GR, grase, glutathione 100.0 1.3E-36 4.5E-41 314.7 23.9 286 61-404 10-346 (479)
34 1fec_A Trypanothione reductase 100.0 2.6E-36 8.8E-41 313.1 26.1 286 62-403 3-349 (490)
35 1ges_A Glutathione reductase; 100.0 1.4E-36 4.9E-41 311.9 23.4 280 62-404 4-327 (450)
36 2r9z_A Glutathione amide reduc 100.0 4.6E-36 1.6E-40 309.1 24.4 279 62-403 4-325 (463)
37 3dgh_A TRXR-1, thioredoxin red 100.0 1E-35 3.6E-40 308.5 26.3 287 60-403 7-350 (483)
38 1onf_A GR, grase, glutathione 100.0 3.5E-36 1.2E-40 313.0 22.7 298 62-403 2-369 (500)
39 2qae_A Lipoamide, dihydrolipoy 100.0 9.5E-37 3.2E-41 315.2 18.2 288 62-403 2-338 (468)
40 1zk7_A HGII, reductase, mercur 100.0 2.1E-35 7.1E-40 305.1 28.0 285 61-403 3-332 (467)
41 3dgz_A Thioredoxin reductase 2 100.0 8.1E-36 2.8E-40 309.6 25.0 289 61-404 5-351 (488)
42 1ojt_A Surface protein; redox- 100.0 6.7E-36 2.3E-40 309.7 24.2 291 62-403 6-347 (482)
43 3dk9_A Grase, GR, glutathione 100.0 4.4E-36 1.5E-40 311.0 22.4 284 60-404 18-355 (478)
44 2a8x_A Dihydrolipoyl dehydroge 100.0 4.2E-36 1.5E-40 309.9 21.7 285 62-403 3-332 (464)
45 1dxl_A Dihydrolipoamide dehydr 100.0 2.7E-36 9.3E-41 312.0 20.2 287 61-403 5-340 (470)
46 1ebd_A E3BD, dihydrolipoamide 100.0 5E-36 1.7E-40 308.6 21.9 283 62-403 3-331 (455)
47 1xdi_A RV3303C-LPDA; reductase 100.0 4.8E-36 1.6E-40 312.2 21.4 286 63-403 3-340 (499)
48 1v59_A Dihydrolipoamide dehydr 100.0 1.3E-35 4.5E-40 307.5 22.0 314 62-439 5-375 (478)
49 2zbw_A Thioredoxin reductase; 100.0 2.8E-35 9.5E-40 290.9 22.4 284 62-407 5-317 (335)
50 3itj_A Thioredoxin reductase 1 100.0 6.2E-36 2.1E-40 295.7 17.6 291 60-407 20-335 (338)
51 2eq6_A Pyruvate dehydrogenase 100.0 7.8E-36 2.7E-40 307.6 19.0 278 62-403 6-332 (464)
52 2q7v_A Thioredoxin reductase; 100.0 2.6E-35 8.9E-40 289.9 21.8 283 62-407 8-312 (325)
53 3urh_A Dihydrolipoyl dehydroge 100.0 3.4E-35 1.2E-39 305.3 23.4 289 61-404 24-362 (491)
54 4b1b_A TRXR, thioredoxin reduc 100.0 7.1E-35 2.4E-39 302.9 25.6 317 62-439 42-410 (542)
55 3cty_A Thioredoxin reductase; 100.0 2.1E-35 7.3E-40 289.8 20.5 285 62-407 16-316 (319)
56 2q0l_A TRXR, thioredoxin reduc 100.0 2.9E-35 9.8E-40 287.7 21.4 285 63-407 2-309 (311)
57 3r9u_A Thioredoxin reductase; 100.0 9.2E-36 3.1E-40 291.5 17.9 285 61-407 3-312 (315)
58 4dna_A Probable glutathione re 100.0 2.2E-35 7.6E-40 304.4 21.1 281 62-404 5-330 (463)
59 4fk1_A Putative thioredoxin re 100.0 1.8E-35 6E-40 288.4 19.2 284 60-407 4-300 (304)
60 3lad_A Dihydrolipoamide dehydr 100.0 5.8E-35 2E-39 302.5 22.9 287 62-404 3-342 (476)
61 3o0h_A Glutathione reductase; 100.0 4.4E-35 1.5E-39 303.7 21.5 282 62-404 26-350 (484)
62 2vdc_G Glutamate synthase [NAD 100.0 9.7E-37 3.3E-41 312.0 8.9 343 3-407 65-444 (456)
63 3lzw_A Ferredoxin--NADP reduct 100.0 2.2E-35 7.4E-40 291.0 18.0 286 62-407 7-315 (332)
64 1lvl_A Dihydrolipoamide dehydr 100.0 6.5E-35 2.2E-39 300.3 20.9 277 62-403 5-328 (458)
65 1trb_A Thioredoxin reductase; 100.0 4.6E-35 1.6E-39 287.4 18.9 289 62-407 5-314 (320)
66 2yqu_A 2-oxoglutarate dehydrog 100.0 1.9E-35 6.6E-40 304.3 16.8 283 63-404 2-326 (455)
67 4gcm_A TRXR, thioredoxin reduc 100.0 7.4E-35 2.5E-39 285.0 19.5 282 62-407 6-306 (312)
68 2x8g_A Thioredoxin glutathione 100.0 2.9E-34 1E-38 305.3 24.5 288 61-404 106-458 (598)
69 1fl2_A Alkyl hydroperoxide red 100.0 3.7E-34 1.3E-38 279.7 21.8 284 63-407 2-305 (310)
70 4a5l_A Thioredoxin reductase; 100.0 1.1E-34 3.8E-39 283.9 17.3 292 61-407 3-312 (314)
71 3ab1_A Ferredoxin--NADP reduct 100.0 6.7E-34 2.3E-38 284.0 21.6 288 61-407 13-328 (360)
72 3ic9_A Dihydrolipoamide dehydr 100.0 4.8E-34 1.6E-38 296.2 20.0 282 62-405 8-338 (492)
73 4a9w_A Monooxygenase; baeyer-v 100.0 2E-34 6.7E-39 286.9 14.3 288 62-407 3-352 (357)
74 2a87_A TRXR, TR, thioredoxin r 100.0 6.9E-34 2.4E-38 281.0 17.8 282 61-407 13-316 (335)
75 1vdc_A NTR, NADPH dependent th 100.0 1.2E-33 4E-38 279.0 18.3 293 62-407 8-323 (333)
76 3d1c_A Flavin-containing putat 100.0 6.1E-33 2.1E-37 277.8 17.3 290 62-407 4-339 (369)
77 1hyu_A AHPF, alkyl hydroperoxi 100.0 6.5E-32 2.2E-36 281.8 22.9 281 61-407 211-516 (521)
78 1gte_A Dihydropyrimidine dehyd 100.0 6.1E-33 2.1E-37 310.2 12.3 348 3-407 122-508 (1025)
79 2xve_A Flavin-containing monoo 100.0 2.3E-31 7.7E-36 273.9 18.5 271 63-404 3-338 (464)
80 1lqt_A FPRA; NADP+ derivative, 100.0 9.4E-32 3.2E-36 275.5 12.8 301 62-407 3-387 (456)
81 1cjc_A Protein (adrenodoxin re 100.0 5.6E-31 1.9E-35 270.0 13.9 301 62-407 6-395 (460)
82 3s5w_A L-ornithine 5-monooxyge 100.0 7.4E-30 2.5E-34 263.4 18.3 303 61-406 29-448 (463)
83 2gv8_A Monooxygenase; FMO, FAD 100.0 6E-30 2.1E-34 262.7 15.1 279 61-404 5-359 (447)
84 1o94_A Tmadh, trimethylamine d 100.0 4.5E-30 1.5E-34 277.9 13.6 274 60-406 387-699 (729)
85 3k30_A Histamine dehydrogenase 100.0 9.4E-31 3.2E-35 282.1 5.2 268 60-407 389-675 (690)
86 2gag_A Heterotetrameric sarcos 100.0 2.2E-29 7.7E-34 279.5 16.1 286 62-407 128-444 (965)
87 1y56_A Hypothetical protein PH 100.0 6.5E-29 2.2E-33 257.5 13.8 257 62-406 108-376 (493)
88 3gwf_A Cyclohexanone monooxyge 100.0 1.5E-28 5E-33 256.7 15.0 291 62-407 8-457 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 100.0 2.7E-28 9.2E-33 262.3 14.8 269 60-402 371-671 (671)
90 3uox_A Otemo; baeyer-villiger 99.9 1.7E-27 6E-32 248.9 14.0 299 61-407 8-466 (545)
91 4ap3_A Steroid monooxygenase; 99.9 2.3E-27 8E-32 248.1 10.4 291 62-407 21-471 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 3.7E-26 1.3E-30 239.7 11.8 292 62-407 16-466 (542)
93 2ywl_A Thioredoxin reductase r 99.9 4.1E-22 1.4E-26 178.2 17.0 150 232-407 3-171 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.1E-19 3.6E-24 188.5 22.4 304 60-402 37-483 (501)
95 2cul_A Glucose-inhibited divis 99.6 2.9E-15 9.8E-20 139.3 11.9 151 232-406 5-231 (232)
96 2e5v_A L-aspartate oxidase; ar 99.6 6.7E-17 2.3E-21 166.2 -2.4 218 131-403 132-365 (472)
97 2gqf_A Hypothetical protein HI 99.4 2.2E-14 7.4E-19 144.3 3.7 46 354-403 353-399 (401)
98 3fpz_A Thiazole biosynthetic e 99.4 1.2E-15 4.1E-20 149.5 -7.5 255 61-407 64-325 (326)
99 1rp0_A ARA6, thiazole biosynth 99.1 1.5E-10 5E-15 110.8 9.3 159 232-407 41-275 (284)
100 2zxi_A TRNA uridine 5-carboxym 99.1 2.6E-10 8.9E-15 118.8 11.4 121 62-191 27-189 (637)
101 2cul_A Glucose-inhibited divis 99.0 1.2E-09 4.2E-14 101.0 8.4 118 62-190 3-133 (232)
102 2ywl_A Thioredoxin reductase r 98.9 1E-09 3.5E-14 97.2 6.3 108 63-184 2-112 (180)
103 3ces_A MNMG, tRNA uridine 5-ca 98.9 9.6E-10 3.3E-14 115.0 6.2 121 61-190 27-189 (651)
104 3k7m_X 6-hydroxy-L-nicotine ox 98.9 1.1E-09 3.6E-14 111.3 5.4 86 285-373 205-306 (431)
105 2bry_A NEDD9 interacting prote 98.7 4.5E-09 1.5E-13 108.5 3.0 122 61-189 91-237 (497)
106 2bry_A NEDD9 interacting prote 98.7 8.5E-09 2.9E-13 106.4 5.1 146 170-336 37-231 (497)
107 3dme_A Conserved exported prot 98.7 3.8E-07 1.3E-11 90.0 15.5 62 283-344 149-219 (369)
108 3v76_A Flavoprotein; structura 98.6 2.6E-08 9E-13 100.2 5.8 37 61-97 26-62 (417)
109 1rp0_A ARA6, thiazole biosynth 98.6 6.1E-08 2.1E-12 92.4 8.0 122 62-184 39-193 (284)
110 3cp8_A TRNA uridine 5-carboxym 98.6 1.4E-08 4.7E-13 106.2 3.6 120 61-189 20-181 (641)
111 3klj_A NAD(FAD)-dependent dehy 98.6 1.4E-07 4.9E-12 93.9 10.3 92 231-336 10-117 (385)
112 3alj_A 2-methyl-3-hydroxypyrid 98.6 4.4E-08 1.5E-12 97.5 5.8 37 61-97 10-46 (379)
113 3hyw_A Sulfide-quinone reducta 98.5 6.1E-08 2.1E-12 98.2 5.5 94 231-336 3-110 (430)
114 2gag_B Heterotetrameric sarcos 98.5 2.5E-06 8.5E-11 85.4 17.2 60 283-343 173-238 (405)
115 3pvc_A TRNA 5-methylaminomethy 98.5 2.2E-06 7.4E-11 92.1 16.8 63 283-345 411-479 (689)
116 3fbs_A Oxidoreductase; structu 98.5 4.7E-07 1.6E-11 86.4 10.2 91 232-336 4-113 (297)
117 3vrd_B FCCB subunit, flavocyto 98.5 1.6E-07 5.6E-12 94.1 7.3 95 230-336 2-109 (401)
118 3oz2_A Digeranylgeranylglycero 98.5 5.4E-08 1.9E-12 97.0 3.6 37 61-97 3-39 (397)
119 1y56_B Sarcosine oxidase; dehy 98.5 6.1E-06 2.1E-10 81.8 18.5 60 283-343 148-213 (382)
120 2gf3_A MSOX, monomeric sarcosi 98.5 6.6E-07 2.2E-11 89.1 11.2 81 260-343 126-213 (389)
121 3sx6_A Sulfide-quinone reducta 98.5 2.6E-07 8.8E-12 93.8 8.2 95 231-336 5-113 (437)
122 2xdo_A TETX2 protein; tetracyc 98.4 3.7E-07 1.3E-11 91.5 9.0 37 60-96 24-60 (398)
123 4a9w_A Monooxygenase; baeyer-v 98.4 9.6E-07 3.3E-11 86.5 11.8 90 232-336 5-133 (357)
124 3nlc_A Uncharacterized protein 98.4 2.7E-07 9.2E-12 95.6 7.8 47 352-407 497-543 (549)
125 2q7v_A Thioredoxin reductase; 98.4 9.6E-07 3.3E-11 85.7 11.2 92 231-336 9-124 (325)
126 2i0z_A NAD(FAD)-utilizing dehy 98.4 2.7E-07 9.4E-12 93.9 7.4 36 61-96 25-60 (447)
127 3rp8_A Flavoprotein monooxygen 98.4 3.6E-07 1.2E-11 91.8 7.5 38 60-97 21-58 (407)
128 3itj_A Thioredoxin reductase 1 98.4 9.3E-07 3.2E-11 86.0 10.0 94 229-336 21-143 (338)
129 3f8d_A Thioredoxin reductase ( 98.4 1.2E-06 3.9E-11 84.7 10.5 92 231-336 16-126 (323)
130 2q0l_A TRXR, thioredoxin reduc 98.4 2.1E-06 7.2E-11 82.6 12.2 91 232-336 3-115 (311)
131 3r9u_A Thioredoxin reductase; 98.4 1.8E-06 6.2E-11 83.0 11.3 92 231-336 5-119 (315)
132 3ps9_A TRNA 5-methylaminomethy 98.4 3.9E-06 1.3E-10 89.9 14.9 63 283-345 416-483 (676)
133 3i3l_A Alkylhalidase CMLS; fla 98.4 3.5E-07 1.2E-11 96.0 6.5 35 61-95 22-56 (591)
134 2x3n_A Probable FAD-dependent 98.4 2.9E-07 1E-11 92.2 5.5 36 62-97 6-41 (399)
135 3lzw_A Ferredoxin--NADP reduct 98.3 2E-06 6.8E-11 83.4 11.1 91 231-336 8-127 (332)
136 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 2.6E-07 9E-12 90.5 4.7 34 63-96 2-38 (342)
137 3alj_A 2-methyl-3-hydroxypyrid 98.3 4.2E-06 1.5E-10 83.1 13.4 92 231-336 12-161 (379)
138 1yvv_A Amine oxidase, flavin-c 98.3 5.6E-07 1.9E-11 87.7 6.7 34 63-96 3-36 (336)
139 1q1r_A Putidaredoxin reductase 98.3 1E-06 3.6E-11 89.1 8.9 94 231-336 5-115 (431)
140 2vou_A 2,6-dihydroxypyridine h 98.3 7E-07 2.4E-11 89.4 7.3 36 61-96 4-39 (397)
141 3nix_A Flavoprotein/dehydrogen 98.3 6.1E-07 2.1E-11 90.4 6.9 34 62-95 5-38 (421)
142 3ef6_A Toluene 1,2-dioxygenase 98.3 2.1E-06 7E-11 86.3 10.7 93 232-336 4-112 (410)
143 3h8l_A NADH oxidase; membrane 98.3 5.5E-07 1.9E-11 90.5 6.3 92 231-336 2-114 (409)
144 3nlc_A Uncharacterized protein 98.3 2E-06 6.7E-11 89.1 10.1 103 231-347 108-292 (549)
145 2zbw_A Thioredoxin reductase; 98.3 3.6E-06 1.2E-10 81.9 11.5 91 231-335 6-121 (335)
146 3ab1_A Ferredoxin--NADP reduct 98.3 5.7E-06 1.9E-10 81.5 12.8 91 231-335 15-131 (360)
147 3kkj_A Amine oxidase, flavin-c 98.3 4.1E-07 1.4E-11 85.4 4.3 36 63-98 3-38 (336)
148 1fl2_A Alkyl hydroperoxide red 98.3 2.7E-06 9.3E-11 81.8 9.9 91 232-336 3-116 (310)
149 3cgv_A Geranylgeranyl reductas 98.3 5.3E-07 1.8E-11 90.0 5.0 36 62-97 4-39 (397)
150 3ihg_A RDME; flavoenzyme, anth 98.3 1.2E-06 4.2E-11 91.2 7.9 35 62-96 5-39 (535)
151 1d4d_A Flavocytochrome C fumar 98.2 9.1E-06 3.1E-10 85.2 14.0 36 62-97 126-161 (572)
152 3h28_A Sulfide-quinone reducta 98.2 5.7E-07 2E-11 91.1 4.4 94 231-336 3-110 (430)
153 3fg2_P Putative rubredoxin red 98.2 2.3E-06 8E-11 85.8 8.4 94 231-336 2-111 (404)
154 3fmw_A Oxygenase; mithramycin, 98.2 1.6E-06 5.5E-11 90.7 7.5 35 62-96 49-83 (570)
155 2eq6_A Pyruvate dehydrogenase 98.2 1.9E-06 6.4E-11 88.1 7.8 106 62-186 169-275 (464)
156 2a87_A TRXR, TR, thioredoxin r 98.2 5.9E-06 2E-10 80.5 11.1 92 231-336 15-127 (335)
157 2yqu_A 2-oxoglutarate dehydrog 98.2 1.3E-06 4.5E-11 89.0 6.6 101 62-186 167-268 (455)
158 3atr_A Conserved archaeal prot 98.2 2.9E-06 1E-10 86.4 9.1 35 62-96 6-40 (453)
159 1nhp_A NADH peroxidase; oxidor 98.2 2.3E-06 8E-11 87.0 8.4 101 61-185 148-249 (447)
160 3v76_A Flavoprotein; structura 98.2 4.1E-06 1.4E-10 84.2 9.9 89 232-335 29-187 (417)
161 3lxd_A FAD-dependent pyridine 98.2 4E-06 1.4E-10 84.4 9.6 94 231-336 10-120 (415)
162 3d1c_A Flavin-containing putat 98.2 1E-05 3.5E-10 79.8 12.4 90 232-336 6-144 (369)
163 3cty_A Thioredoxin reductase; 98.2 6.2E-06 2.1E-10 79.6 10.6 91 231-336 17-127 (319)
164 3e1t_A Halogenase; flavoprotei 98.2 1.3E-06 4.6E-11 90.4 6.2 34 62-95 7-40 (512)
165 2qa1_A PGAE, polyketide oxygen 98.2 4.9E-06 1.7E-10 85.8 10.2 38 60-97 9-46 (500)
166 2gqw_A Ferredoxin reductase; f 98.2 4.1E-06 1.4E-10 84.1 9.3 94 231-336 8-114 (408)
167 1vdc_A NTR, NADPH dependent th 98.1 4.9E-06 1.7E-10 80.9 9.0 91 231-336 9-125 (333)
168 3jsk_A Cypbp37 protein; octame 98.1 3.2E-06 1.1E-10 81.8 7.5 36 62-97 79-116 (344)
169 1trb_A Thioredoxin reductase; 98.1 8.2E-06 2.8E-10 78.7 10.5 92 231-336 6-117 (320)
170 4a5l_A Thioredoxin reductase; 98.1 1.2E-05 4.2E-10 77.3 11.7 91 232-336 6-122 (314)
171 2v3a_A Rubredoxin reductase; a 98.1 4.5E-06 1.6E-10 83.0 8.6 100 62-184 145-245 (384)
172 1ebd_A E3BD, dihydrolipoamide 98.1 5.6E-06 1.9E-10 84.4 9.5 103 62-185 170-273 (455)
173 2qa2_A CABE, polyketide oxygen 98.1 3.9E-06 1.3E-10 86.5 8.1 37 61-97 11-47 (499)
174 1y0p_A Fumarate reductase flav 98.1 2.7E-06 9.2E-11 89.4 7.0 36 62-97 126-161 (571)
175 2gqf_A Hypothetical protein HI 98.1 1.5E-05 5.1E-10 79.7 12.0 90 232-336 6-169 (401)
176 4fk1_A Putative thioredoxin re 98.1 1E-05 3.5E-10 77.6 10.3 91 232-336 8-118 (304)
177 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.1E-05 3.6E-10 83.8 11.0 92 231-336 213-327 (521)
178 1k0i_A P-hydroxybenzoate hydro 98.1 1.7E-06 5.9E-11 86.3 4.2 34 63-96 3-36 (394)
179 3kd9_A Coenzyme A disulfide re 98.1 7.3E-06 2.5E-10 83.4 8.6 94 231-336 4-115 (449)
180 4dgk_A Phytoene dehydrogenase; 98.1 1.6E-06 5.4E-11 89.5 3.6 51 284-334 221-277 (501)
181 1xhc_A NADH oxidase /nitrite r 98.0 1E-05 3.5E-10 80.0 9.1 90 231-336 9-114 (367)
182 2r9z_A Glutathione amide reduc 98.0 1.3E-05 4.3E-10 81.9 9.8 90 232-336 6-143 (463)
183 1v59_A Dihydrolipoamide dehydr 98.0 9.3E-06 3.2E-10 83.3 8.8 105 62-185 183-290 (478)
184 2x3n_A Probable FAD-dependent 98.0 2E-05 6.7E-10 78.7 10.9 91 232-336 8-167 (399)
185 1ges_A Glutathione reductase; 98.0 2E-05 6.8E-10 80.1 10.7 91 231-336 5-144 (450)
186 1ojt_A Surface protein; redox- 98.0 6.3E-06 2.2E-10 84.6 6.7 103 62-184 185-288 (482)
187 3oc4_A Oxidoreductase, pyridin 98.0 1.9E-05 6.5E-10 80.3 10.2 94 231-336 3-116 (452)
188 4b1b_A TRXR, thioredoxin reduc 98.0 6.1E-06 2.1E-10 85.5 6.6 99 62-185 223-322 (542)
189 3o0h_A Glutathione reductase; 98.0 1.8E-05 6.1E-10 81.3 10.0 91 232-336 28-167 (484)
190 1zmd_A Dihydrolipoyl dehydroge 98.0 8.5E-06 2.9E-10 83.5 7.5 106 62-185 178-285 (474)
191 2bc0_A NADH oxidase; flavoprot 98.0 1E-05 3.4E-10 83.3 8.0 99 61-185 193-294 (490)
192 4gcm_A TRXR, thioredoxin reduc 98.0 4.6E-05 1.6E-09 73.2 12.3 91 232-336 8-117 (312)
193 1lvl_A Dihydrolipoamide dehydr 98.0 3.8E-05 1.3E-09 78.2 12.2 91 231-336 6-147 (458)
194 4ap3_A Steroid monooxygenase; 98.0 2.3E-05 7.9E-10 81.6 10.7 89 231-333 22-157 (549)
195 1qo8_A Flavocytochrome C3 fuma 98.0 1E-05 3.4E-10 84.9 8.0 37 61-97 120-156 (566)
196 1m6i_A Programmed cell death p 98.0 7.9E-06 2.7E-10 84.1 7.1 94 231-336 12-145 (493)
197 3oz2_A Digeranylgeranylglycero 98.0 5.8E-05 2E-09 74.8 13.1 90 232-335 6-162 (397)
198 2a8x_A Dihydrolipoyl dehydroge 98.0 1E-05 3.5E-10 82.6 7.4 103 62-185 171-274 (464)
199 3gwf_A Cyclohexanone monooxyge 98.0 2.4E-05 8.3E-10 81.3 10.3 89 231-333 9-145 (540)
200 4eqs_A Coenzyme A disulfide re 98.0 2.6E-05 9E-10 78.9 10.4 93 232-336 2-117 (437)
201 2xve_A Flavin-containing monoo 98.0 2.5E-05 8.5E-10 79.7 10.1 92 231-336 3-169 (464)
202 2i0z_A NAD(FAD)-utilizing dehy 97.9 3.9E-05 1.3E-09 77.9 11.5 90 232-335 28-191 (447)
203 2vdc_G Glutamate synthase [NAD 97.9 6.9E-06 2.3E-10 83.5 5.7 88 229-335 121-219 (456)
204 3ic9_A Dihydrolipoamide dehydr 97.9 1.6E-05 5.6E-10 81.7 8.6 104 62-186 174-278 (492)
205 3s5w_A L-ornithine 5-monooxyge 97.9 2.4E-05 8.2E-10 79.8 9.7 96 232-336 32-193 (463)
206 2cdu_A NADPH oxidase; flavoenz 97.9 3.3E-05 1.1E-09 78.5 10.6 93 232-336 2-118 (452)
207 2gv8_A Monooxygenase; FMO, FAD 97.9 3.7E-05 1.3E-09 78.0 10.9 85 61-186 211-296 (447)
208 3uox_A Otemo; baeyer-villiger 97.9 3.1E-05 1.1E-09 80.5 10.4 89 231-333 10-145 (545)
209 1onf_A GR, grase, glutathione 97.9 8.5E-06 2.9E-10 84.0 6.0 91 232-336 4-154 (500)
210 1ryi_A Glycine oxidase; flavop 97.9 3.8E-05 1.3E-09 76.0 10.6 58 285-343 165-227 (382)
211 3iwa_A FAD-dependent pyridine 97.9 1.9E-05 6.5E-10 80.8 8.6 94 231-336 4-126 (472)
212 2gjc_A Thiazole biosynthetic e 97.9 4.1E-05 1.4E-09 73.6 10.2 35 63-97 66-102 (326)
213 2qae_A Lipoamide, dihydrolipoy 97.9 1.4E-05 4.9E-10 81.6 7.3 104 62-185 174-279 (468)
214 2gjc_A Thiazole biosynthetic e 97.9 9.8E-05 3.3E-09 70.9 12.2 159 232-406 67-324 (326)
215 3lad_A Dihydrolipoamide dehydr 97.9 2.7E-05 9.3E-10 79.7 8.9 103 62-185 180-283 (476)
216 4dna_A Probable glutathione re 97.9 1.8E-05 6.1E-10 80.8 7.5 91 232-336 7-146 (463)
217 3urh_A Dihydrolipoyl dehydroge 97.9 2.1E-05 7.3E-10 80.9 8.1 106 62-186 198-304 (491)
218 3ces_A MNMG, tRNA uridine 5-ca 97.9 7.1E-05 2.4E-09 78.3 12.0 91 232-336 30-182 (651)
219 3l8k_A Dihydrolipoyl dehydroge 97.9 2.6E-05 8.9E-10 79.6 8.7 91 232-336 6-145 (466)
220 3ntd_A FAD-dependent pyridine 97.9 4.1E-05 1.4E-09 80.2 10.3 94 231-336 2-118 (565)
221 3ics_A Coenzyme A-disulfide re 97.9 1.4E-05 4.8E-10 84.2 6.5 97 62-184 187-284 (588)
222 1fec_A Trypanothione reductase 97.9 4E-05 1.4E-09 78.8 9.8 91 232-336 5-164 (490)
223 1dxl_A Dihydrolipoamide dehydr 97.8 7E-05 2.4E-09 76.5 11.3 92 231-336 7-152 (470)
224 4hb9_A Similarities with proba 97.8 9.5E-06 3.2E-10 81.1 4.4 35 63-97 2-36 (412)
225 4g6h_A Rotenone-insensitive NA 97.8 1E-05 3.4E-10 83.4 4.6 93 231-337 43-171 (502)
226 1zk7_A HGII, reductase, mercur 97.8 5.9E-05 2E-09 77.0 10.3 92 231-336 5-151 (467)
227 2hqm_A GR, grase, glutathione 97.8 1.6E-05 5.5E-10 81.5 6.1 100 62-184 185-287 (479)
228 2wpf_A Trypanothione reductase 97.8 3.5E-05 1.2E-09 79.3 8.5 92 231-336 8-168 (495)
229 2b9w_A Putative aminooxidase; 97.8 1.2E-05 4.2E-10 80.9 4.9 39 61-99 5-44 (424)
230 3jsk_A Cypbp37 protein; octame 97.8 6.5E-05 2.2E-09 72.6 9.6 159 231-407 80-335 (344)
231 3nix_A Flavoprotein/dehydrogen 97.8 5.5E-05 1.9E-09 75.9 9.6 90 232-335 7-166 (421)
232 3cgb_A Pyridine nucleotide-dis 97.8 8.7E-05 3E-09 76.0 11.2 94 231-336 37-153 (480)
233 2zxi_A TRNA uridine 5-carboxym 97.8 0.00013 4.4E-09 76.1 12.4 91 232-336 29-181 (637)
234 1k0i_A P-hydroxybenzoate hydro 97.8 0.00012 4.2E-09 72.8 12.0 91 232-336 4-164 (394)
235 1mo9_A ORF3; nucleotide bindin 97.8 6.4E-05 2.2E-09 77.9 10.1 91 231-336 44-187 (523)
236 2vou_A 2,6-dihydroxypyridine h 97.8 7.1E-05 2.4E-09 74.6 9.8 92 231-336 6-154 (397)
237 1xdi_A RV3303C-LPDA; reductase 97.8 8.5E-05 2.9E-09 76.5 10.5 91 232-336 4-157 (499)
238 3nrn_A Uncharacterized protein 97.8 1.4E-05 4.8E-10 80.4 4.5 54 283-336 188-244 (421)
239 4gde_A UDP-galactopyranose mut 97.8 9.2E-06 3.1E-10 84.0 3.1 49 285-333 223-274 (513)
240 3cp8_A TRNA uridine 5-carboxym 97.8 0.00013 4.4E-09 76.4 11.6 91 232-336 23-175 (641)
241 3ka7_A Oxidoreductase; structu 97.8 1.5E-05 5.1E-10 80.3 4.5 52 284-336 196-253 (425)
242 3nks_A Protoporphyrinogen oxid 97.8 1.8E-05 6.1E-10 81.0 5.1 51 284-334 234-289 (477)
243 1yvv_A Amine oxidase, flavin-c 97.7 0.00017 5.9E-09 69.8 11.9 89 232-335 4-162 (336)
244 3nyc_A D-arginine dehydrogenas 97.7 1.3E-05 4.4E-10 79.3 3.7 60 283-343 153-217 (381)
245 2uzz_A N-methyl-L-tryptophan o 97.7 0.00016 5.4E-09 71.2 11.6 56 285-341 150-210 (372)
246 2e1m_A L-glutamate oxidase; L- 97.7 2.3E-05 7.9E-10 77.2 5.3 39 61-99 43-82 (376)
247 2bcg_G Secretory pathway GDP d 97.7 1.9E-05 6.5E-10 80.4 4.6 53 284-337 242-302 (453)
248 3ihm_A Styrene monooxygenase A 97.7 1.5E-05 5.1E-10 80.5 3.7 33 63-95 23-55 (430)
249 3dk9_A Grase, GR, glutathione 97.7 5.6E-05 1.9E-09 77.4 7.8 105 62-185 187-296 (478)
250 1rsg_A FMS1 protein; FAD bindi 97.7 1.4E-05 4.7E-10 82.9 3.1 39 62-100 8-47 (516)
251 3i3l_A Alkylhalidase CMLS; fla 97.7 0.00023 7.9E-09 74.6 12.3 92 231-336 24-189 (591)
252 1gte_A Dihydropyrimidine dehyd 97.7 2E-05 7E-10 88.1 4.6 91 229-336 186-289 (1025)
253 3dje_A Fructosyl amine: oxygen 97.7 2.1E-05 7.3E-10 79.5 4.3 58 283-340 160-226 (438)
254 1s3e_A Amine oxidase [flavin-c 97.7 2.1E-05 7E-10 81.6 4.3 39 62-100 4-42 (520)
255 1ryi_A Glycine oxidase; flavop 97.7 1.6E-05 5.6E-10 78.7 3.3 35 61-95 16-50 (382)
256 3dgh_A TRXR-1, thioredoxin red 97.7 5.8E-05 2E-09 77.4 7.4 102 62-185 187-292 (483)
257 1v0j_A UDP-galactopyranose mut 97.7 2.3E-05 7.8E-10 78.4 4.0 39 62-100 7-46 (399)
258 3dgz_A Thioredoxin reductase 2 97.7 7.8E-05 2.7E-09 76.6 8.1 102 62-185 185-290 (488)
259 2ivd_A PPO, PPOX, protoporphyr 97.6 3.1E-05 1.1E-09 79.3 4.8 39 61-99 15-53 (478)
260 2jae_A L-amino acid oxidase; o 97.6 3.4E-05 1.2E-09 79.3 5.1 39 61-99 10-48 (489)
261 1cjc_A Protein (adrenodoxin re 97.6 3.5E-05 1.2E-09 78.4 5.0 88 231-335 7-106 (460)
262 2vvm_A Monoamine oxidase N; FA 97.6 3.3E-05 1.1E-09 79.5 4.8 51 284-334 255-311 (495)
263 3i6d_A Protoporphyrinogen oxid 97.6 1.5E-05 5.1E-10 81.3 2.2 37 62-98 5-47 (470)
264 3rp8_A Flavoprotein monooxygen 97.6 0.00019 6.4E-09 71.8 10.2 91 230-336 23-182 (407)
265 1lqt_A FPRA; NADP+ derivative, 97.6 2.7E-05 9.2E-10 79.2 3.9 92 231-335 4-108 (456)
266 1y0p_A Fumarate reductase flav 97.6 0.00021 7E-09 74.9 10.5 50 286-335 257-317 (571)
267 3c96_A Flavin-containing monoo 97.6 3E-05 1E-09 77.8 3.9 36 62-97 4-40 (410)
268 1c0p_A D-amino acid oxidase; a 97.6 3.6E-05 1.2E-09 75.7 4.5 34 62-95 6-39 (363)
269 3cgv_A Geranylgeranyl reductas 97.6 0.00018 6.2E-09 71.4 9.5 90 232-335 6-162 (397)
270 2oln_A NIKD protein; flavoprot 97.6 2.4E-05 8.3E-10 78.0 3.0 59 284-343 153-216 (397)
271 1w4x_A Phenylacetone monooxyge 97.6 0.00027 9.1E-09 73.6 10.6 92 231-336 17-155 (542)
272 3qfa_A Thioredoxin reductase 1 97.6 0.00014 4.9E-09 75.2 8.5 103 62-185 210-318 (519)
273 2bi7_A UDP-galactopyranose mut 97.6 5.6E-05 1.9E-09 75.1 5.2 38 62-99 3-40 (384)
274 3fmw_A Oxygenase; mithramycin, 97.6 0.00023 7.8E-09 74.4 10.0 90 232-335 51-207 (570)
275 3hdq_A UDP-galactopyranose mut 97.5 4.6E-05 1.6E-09 75.7 4.3 39 61-99 28-66 (397)
276 1qo8_A Flavocytochrome C3 fuma 97.5 0.00034 1.2E-08 73.2 11.1 51 286-336 252-313 (566)
277 3lov_A Protoporphyrinogen oxid 97.5 4.3E-05 1.5E-09 78.1 4.1 38 62-99 4-43 (475)
278 3c4a_A Probable tryptophan hyd 97.5 3.7E-05 1.3E-09 76.3 3.5 35 63-97 1-37 (381)
279 1sez_A Protoporphyrinogen oxid 97.5 6.1E-05 2.1E-09 77.7 5.2 38 62-99 13-50 (504)
280 2yg5_A Putrescine oxidase; oxi 97.5 2.9E-05 1E-09 78.9 2.7 39 62-100 5-43 (453)
281 3c4n_A Uncharacterized protein 97.5 0.00021 7.3E-09 71.4 8.7 58 286-344 174-246 (405)
282 2uzz_A N-methyl-L-tryptophan o 97.5 3.2E-05 1.1E-09 76.3 2.6 34 63-96 3-36 (372)
283 2r0c_A REBC; flavin adenine di 97.5 4.2E-05 1.4E-09 79.8 3.5 36 62-97 26-61 (549)
284 1i8t_A UDP-galactopyranose mut 97.5 5.6E-05 1.9E-09 74.6 4.1 37 63-99 2-38 (367)
285 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00024 8.3E-09 69.1 8.4 38 296-333 121-163 (342)
286 2aqj_A Tryptophan halogenase, 97.5 0.00076 2.6E-08 70.0 12.6 49 288-336 169-223 (538)
287 3e1t_A Halogenase; flavoprotei 97.5 0.00044 1.5E-08 71.4 10.6 52 285-336 112-173 (512)
288 3g5s_A Methylenetetrahydrofola 97.5 6.5E-05 2.2E-09 73.3 4.0 34 62-95 1-34 (443)
289 2oln_A NIKD protein; flavoprot 97.5 0.00074 2.5E-08 67.1 11.8 32 232-277 6-37 (397)
290 3atr_A Conserved archaeal prot 97.4 0.00017 5.9E-09 73.2 7.2 91 232-336 8-163 (453)
291 2xdo_A TETX2 protein; tetracyc 97.4 0.00031 1.1E-08 69.9 9.0 92 231-336 27-183 (398)
292 2qa2_A CABE, polyketide oxygen 97.4 0.001 3.5E-08 68.3 12.9 92 231-336 13-167 (499)
293 2iid_A L-amino-acid oxidase; f 97.4 8.1E-05 2.8E-09 76.6 4.5 39 61-99 32-70 (498)
294 2aqj_A Tryptophan halogenase, 97.4 7.5E-05 2.6E-09 77.7 4.2 34 62-95 5-41 (538)
295 3g3e_A D-amino-acid oxidase; F 97.4 4.8E-05 1.6E-09 74.5 2.5 33 63-95 1-39 (351)
296 4hb9_A Similarities with proba 97.4 0.0004 1.4E-08 69.1 9.3 31 232-276 3-33 (412)
297 2e4g_A Tryptophan halogenase; 97.4 0.0001 3.4E-09 76.9 4.9 54 284-337 194-254 (550)
298 4dsg_A UDP-galactopyranose mut 97.4 8.8E-05 3E-09 76.0 4.4 39 61-99 8-47 (484)
299 2pyx_A Tryptophan halogenase; 97.4 7E-05 2.4E-09 77.7 3.6 53 284-336 175-234 (526)
300 2qcu_A Aerobic glycerol-3-phos 97.4 7.5E-05 2.6E-09 77.0 3.6 58 283-340 148-215 (501)
301 2z3y_A Lysine-specific histone 97.4 5.2E-05 1.8E-09 80.9 2.5 39 60-98 105-143 (662)
302 4at0_A 3-ketosteroid-delta4-5a 97.4 7.4E-05 2.5E-09 77.2 3.2 36 62-97 41-76 (510)
303 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00019 6.4E-09 76.3 6.4 36 62-97 32-68 (639)
304 2gmh_A Electron transfer flavo 97.3 0.001 3.5E-08 69.7 11.9 52 285-336 145-218 (584)
305 3ihg_A RDME; flavoenzyme, anth 97.3 0.00066 2.3E-08 70.4 10.3 51 285-335 121-183 (535)
306 2qa1_A PGAE, polyketide oxygen 97.3 0.001 3.5E-08 68.4 11.5 92 231-336 12-166 (500)
307 2x8g_A Thioredoxin glutathione 97.3 0.00094 3.2E-08 70.3 11.5 92 231-336 108-262 (598)
308 2gmh_A Electron transfer flavo 97.3 0.00016 5.5E-09 75.9 5.4 36 62-97 35-76 (584)
309 1d4d_A Flavocytochrome C fumar 97.3 0.00073 2.5E-08 70.7 10.4 51 286-336 257-318 (572)
310 3k30_A Histamine dehydrogenase 97.3 0.00021 7.1E-09 76.7 6.4 101 62-184 523-626 (690)
311 2weu_A Tryptophan 5-halogenase 97.3 8E-05 2.7E-09 77.0 2.9 53 284-336 173-231 (511)
312 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00011 3.9E-09 77.5 4.0 37 62-98 46-82 (623)
313 1pj5_A N,N-dimethylglycine oxi 97.3 0.00071 2.4E-08 74.1 10.4 57 286-343 153-215 (830)
314 3nyc_A D-arginine dehydrogenas 97.3 0.00037 1.3E-08 68.7 7.4 32 230-276 9-40 (381)
315 3c4n_A Uncharacterized protein 97.3 8.1E-05 2.8E-09 74.5 2.5 34 62-95 36-71 (405)
316 3axb_A Putative oxidoreductase 97.3 5.8E-05 2E-09 76.6 1.4 60 283-343 180-262 (448)
317 3da1_A Glycerol-3-phosphate de 97.3 0.00014 4.6E-09 76.0 4.2 62 283-344 169-241 (561)
318 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00022 7.5E-09 76.2 5.7 82 230-336 373-468 (671)
319 3c96_A Flavin-containing monoo 97.2 0.001 3.5E-08 66.4 10.0 91 232-336 6-170 (410)
320 1chu_A Protein (L-aspartate ox 97.2 0.00017 5.7E-09 74.9 4.1 34 62-96 8-41 (540)
321 1d5t_A Guanine nucleotide diss 97.2 0.00024 8.3E-09 71.7 4.5 53 284-336 234-291 (433)
322 2xag_A Lysine-specific histone 97.2 0.0003 1E-08 76.5 5.5 84 13-99 232-315 (852)
323 2rgh_A Alpha-glycerophosphate 97.2 0.00019 6.7E-09 75.0 3.7 59 283-341 187-256 (571)
324 2gag_A Heterotetrameric sarcos 97.1 0.00089 3E-08 74.4 8.6 92 231-336 129-254 (965)
325 2bs2_A Quinol-fumarate reducta 97.1 0.00028 9.7E-09 74.8 4.4 34 62-95 5-38 (660)
326 3p1w_A Rabgdi protein; GDI RAB 97.1 0.00025 8.4E-09 71.9 3.5 51 284-334 256-313 (475)
327 2wdq_A Succinate dehydrogenase 97.1 0.00024 8.3E-09 74.5 3.5 34 62-95 7-40 (588)
328 1pn0_A Phenol 2-monooxygenase; 97.1 0.0003 1E-08 75.0 4.1 35 62-96 8-47 (665)
329 4gut_A Lysine-specific histone 97.1 0.00028 9.6E-09 76.2 3.9 38 61-98 335-372 (776)
330 3c4a_A Probable tryptophan hyd 97.0 0.00039 1.3E-08 68.8 4.6 84 232-336 2-144 (381)
331 3dje_A Fructosyl amine: oxygen 97.0 0.003 1E-07 63.6 11.3 32 232-277 8-40 (438)
332 1pj5_A N,N-dimethylglycine oxi 97.0 0.00029 9.9E-09 77.3 4.0 35 62-96 4-39 (830)
333 1b37_A Protein (polyamine oxid 97.0 0.00034 1.2E-08 71.4 4.2 37 62-98 4-41 (472)
334 2e4g_A Tryptophan halogenase; 97.0 0.004 1.4E-07 64.8 12.4 33 231-277 26-61 (550)
335 2h88_A Succinate dehydrogenase 97.0 0.00028 9.5E-09 74.3 3.5 34 62-95 18-51 (621)
336 2qcu_A Aerobic glycerol-3-phos 97.0 0.0017 5.9E-08 66.7 9.2 32 232-277 5-36 (501)
337 2pyx_A Tryptophan halogenase; 97.0 0.0045 1.5E-07 64.0 12.3 45 231-277 8-52 (526)
338 2weu_A Tryptophan 5-halogenase 97.0 0.0049 1.7E-07 63.4 12.3 32 232-277 4-38 (511)
339 1jnr_A Adenylylsulfate reducta 96.9 0.00046 1.6E-08 73.2 4.4 34 62-95 22-59 (643)
340 3gyx_A Adenylylsulfate reducta 96.9 0.0004 1.4E-08 73.7 3.6 34 62-95 22-61 (662)
341 1kf6_A Fumarate reductase flav 96.9 0.00034 1.2E-08 73.6 3.0 57 349-407 359-416 (602)
342 1y56_A Hypothetical protein PH 96.9 0.00044 1.5E-08 71.0 3.7 90 231-336 109-220 (493)
343 3da1_A Glycerol-3-phosphate de 96.9 0.002 6.9E-08 67.1 8.8 32 232-277 20-51 (561)
344 4at0_A 3-ketosteroid-delta4-5a 96.9 0.0049 1.7E-07 63.4 11.2 51 285-335 203-264 (510)
345 1o94_A Tmadh, trimethylamine d 96.8 0.00085 2.9E-08 72.3 5.4 106 62-184 528-648 (729)
346 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00031 1.1E-08 74.5 1.6 36 62-97 56-100 (721)
347 1kdg_A CDH, cellobiose dehydro 96.7 0.00071 2.4E-08 70.4 3.6 36 61-96 6-41 (546)
348 2e5v_A L-aspartate oxidase; ar 96.6 0.0065 2.2E-07 61.8 9.9 49 287-336 122-177 (472)
349 2dkh_A 3-hydroxybenzoate hydro 96.6 0.0049 1.7E-07 65.3 9.0 52 285-336 142-212 (639)
350 3t37_A Probable dehydrogenase; 96.4 0.0016 5.5E-08 67.3 4.1 35 62-96 17-52 (526)
351 2r0c_A REBC; flavin adenine di 96.4 0.016 5.4E-07 60.2 11.2 49 285-336 139-197 (549)
352 1ju2_A HydroxynitrIle lyase; f 96.3 0.0018 6.2E-08 67.1 3.3 35 62-97 26-60 (536)
353 3q9t_A Choline dehydrogenase a 96.3 0.0025 8.5E-08 66.4 4.2 36 61-96 5-41 (577)
354 1coy_A Cholesterol oxidase; ox 96.2 0.0027 9.4E-08 65.3 4.1 37 61-97 10-46 (507)
355 3llv_A Exopolyphosphatase-rela 96.1 0.0035 1.2E-07 52.2 3.8 34 62-95 6-39 (141)
356 2rgh_A Alpha-glycerophosphate 96.1 0.02 6.7E-07 59.7 9.8 32 232-277 34-65 (571)
357 1n4w_A CHOD, cholesterol oxida 96.0 0.003 1E-07 64.9 3.2 37 62-98 5-41 (504)
358 3qvp_A Glucose oxidase; oxidor 96.0 0.0039 1.3E-07 65.0 4.1 35 61-95 18-53 (583)
359 1id1_A Putative potassium chan 96.0 0.0056 1.9E-07 51.8 4.2 34 62-95 3-36 (153)
360 2g1u_A Hypothetical protein TM 95.9 0.0057 1.9E-07 51.9 4.1 35 61-95 18-52 (155)
361 3fwz_A Inner membrane protein 95.9 0.0074 2.5E-07 50.2 4.6 34 62-95 7-40 (140)
362 4b63_A L-ornithine N5 monooxyg 95.8 0.016 5.6E-07 59.3 7.9 52 285-336 146-215 (501)
363 1lss_A TRK system potassium up 95.7 0.0069 2.4E-07 50.0 3.8 33 63-95 5-37 (140)
364 1gpe_A Protein (glucose oxidas 95.7 0.006 2.1E-07 63.9 3.8 37 61-97 23-60 (587)
365 2jbv_A Choline oxidase; alcoho 95.6 0.0069 2.4E-07 62.8 4.2 36 62-97 13-49 (546)
366 3fim_B ARYL-alcohol oxidase; A 95.6 0.0046 1.6E-07 64.3 2.8 36 62-97 2-38 (566)
367 1pn0_A Phenol 2-monooxygenase; 95.6 0.041 1.4E-06 58.4 9.9 20 232-251 10-29 (665)
368 3ic5_A Putative saccharopine d 95.5 0.0084 2.9E-07 47.8 3.4 34 62-95 5-39 (118)
369 2hmt_A YUAA protein; RCK, KTN, 95.4 0.0088 3E-07 49.6 3.2 34 62-95 6-39 (144)
370 4gut_A Lysine-specific histone 95.4 0.12 4E-06 55.8 12.7 37 297-333 542-583 (776)
371 3kkj_A Amine oxidase, flavin-c 95.3 0.012 4E-07 54.2 4.0 36 362-407 293-328 (336)
372 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.015 5.2E-07 52.3 4.3 36 60-95 29-64 (223)
373 2wdq_A Succinate dehydrogenase 95.0 0.16 5.6E-06 52.9 12.2 49 287-335 146-206 (588)
374 1chu_A Protein (L-aspartate ox 95.0 0.036 1.2E-06 57.3 7.0 30 232-276 10-39 (540)
375 3dfz_A SIRC, precorrin-2 dehyd 94.9 0.015 5.3E-07 52.3 3.5 105 231-373 32-141 (223)
376 3lk7_A UDP-N-acetylmuramoylala 94.6 0.021 7.3E-07 57.6 4.2 35 61-95 8-42 (451)
377 1kyq_A Met8P, siroheme biosynt 94.6 0.015 5.2E-07 54.1 2.7 35 61-95 12-46 (274)
378 1pzg_A LDH, lactate dehydrogen 94.3 0.03 1E-06 54.0 4.3 35 62-96 9-44 (331)
379 3c85_A Putative glutathione-re 94.3 0.025 8.5E-07 49.2 3.4 34 62-95 39-73 (183)
380 2x5o_A UDP-N-acetylmuramoylala 94.3 0.024 8.1E-07 57.0 3.7 35 62-96 5-39 (439)
381 2h88_A Succinate dehydrogenase 94.3 0.17 5.8E-06 53.1 10.3 48 288-335 159-217 (621)
382 3l4b_C TRKA K+ channel protien 94.1 0.027 9.1E-07 50.7 3.3 33 63-95 1-33 (218)
383 4ffl_A PYLC; amino acid, biosy 94.1 0.035 1.2E-06 54.1 4.3 35 62-96 1-35 (363)
384 3oj0_A Glutr, glutamyl-tRNA re 94.0 0.051 1.7E-06 45.2 4.5 34 62-95 21-54 (144)
385 1f0y_A HCDH, L-3-hydroxyacyl-C 93.9 0.044 1.5E-06 52.0 4.5 34 62-95 15-48 (302)
386 4dio_A NAD(P) transhydrogenase 93.9 0.041 1.4E-06 54.0 4.3 35 62-96 190-224 (405)
387 4g65_A TRK system potassium up 93.8 0.039 1.3E-06 55.7 4.2 34 62-95 3-36 (461)
388 3doj_A AT3G25530, dehydrogenas 93.7 0.048 1.7E-06 51.9 4.3 36 60-95 19-54 (310)
389 1vg0_A RAB proteins geranylger 93.6 0.046 1.6E-06 57.2 4.2 53 284-336 378-438 (650)
390 3eag_A UDP-N-acetylmuramate:L- 93.5 0.1 3.5E-06 50.1 6.2 73 231-336 5-79 (326)
391 3lk7_A UDP-N-acetylmuramoylala 93.4 0.075 2.6E-06 53.5 5.4 76 230-336 9-85 (451)
392 3p2y_A Alanine dehydrogenase/p 93.4 0.043 1.5E-06 53.4 3.3 35 61-95 183-217 (381)
393 3eag_A UDP-N-acetylmuramate:L- 93.3 0.056 1.9E-06 51.9 4.1 36 61-96 3-39 (326)
394 4e12_A Diketoreductase; oxidor 93.3 0.063 2.2E-06 50.4 4.3 34 62-95 4-37 (283)
395 2dpo_A L-gulonate 3-dehydrogen 93.1 0.056 1.9E-06 51.6 3.7 36 61-96 5-40 (319)
396 3ado_A Lambda-crystallin; L-gu 93.1 0.057 2E-06 51.4 3.7 35 62-96 6-40 (319)
397 2a9f_A Putative malic enzyme ( 93.0 0.054 1.8E-06 52.7 3.4 35 61-95 187-222 (398)
398 1lld_A L-lactate dehydrogenase 92.9 0.069 2.3E-06 51.0 4.0 34 62-95 7-42 (319)
399 3fpz_A Thiazole biosynthetic e 92.9 0.047 1.6E-06 52.3 2.9 62 231-304 66-136 (326)
400 3e8x_A Putative NAD-dependent 92.9 0.067 2.3E-06 48.4 3.8 36 60-95 19-55 (236)
401 2ew2_A 2-dehydropantoate 2-red 92.8 0.071 2.4E-06 50.6 3.9 34 62-95 3-36 (316)
402 3gpi_A NAD-dependent epimerase 92.7 0.078 2.7E-06 49.6 4.1 34 62-95 3-36 (286)
403 3vtf_A UDP-glucose 6-dehydroge 92.7 0.089 3.1E-06 52.4 4.5 36 60-95 19-54 (444)
404 3i83_A 2-dehydropantoate 2-red 92.6 0.082 2.8E-06 50.6 4.1 33 63-95 3-35 (320)
405 1vl6_A Malate oxidoreductase; 92.6 0.068 2.3E-06 51.9 3.4 34 61-94 191-225 (388)
406 4dll_A 2-hydroxy-3-oxopropiona 92.6 0.077 2.6E-06 50.8 3.8 36 60-95 29-64 (320)
407 3ghy_A Ketopantoate reductase 92.5 0.08 2.7E-06 51.0 3.9 33 62-94 3-35 (335)
408 2raf_A Putative dinucleotide-b 92.5 0.098 3.3E-06 46.6 4.2 35 62-96 19-53 (209)
409 1x13_A NAD(P) transhydrogenase 92.4 0.085 2.9E-06 52.2 4.1 34 62-95 172-205 (401)
410 2o3j_A UDP-glucose 6-dehydroge 92.3 0.079 2.7E-06 53.8 3.7 34 62-95 9-44 (481)
411 3ihm_A Styrene monooxygenase A 92.3 0.09 3.1E-06 52.6 4.1 32 231-276 23-54 (430)
412 1l7d_A Nicotinamide nucleotide 92.1 0.11 3.7E-06 51.1 4.3 36 61-96 171-206 (384)
413 1bg6_A N-(1-D-carboxylethyl)-L 92.0 0.1 3.5E-06 50.6 4.1 34 62-95 4-37 (359)
414 2y0c_A BCEC, UDP-glucose dehyd 92.0 0.1 3.4E-06 52.9 4.1 34 62-95 8-41 (478)
415 3g79_A NDP-N-acetyl-D-galactos 92.0 0.11 3.6E-06 52.6 4.2 35 62-96 18-54 (478)
416 1ks9_A KPA reductase;, 2-dehyd 92.0 0.11 3.9E-06 48.6 4.2 33 64-96 2-34 (291)
417 3pid_A UDP-glucose 6-dehydroge 92.0 0.13 4.3E-06 51.2 4.7 34 61-95 35-68 (432)
418 4dgk_A Phytoene dehydrogenase; 91.8 0.22 7.6E-06 50.6 6.5 38 62-99 1-38 (501)
419 3k6j_A Protein F01G10.3, confi 91.8 0.2 6.8E-06 50.2 5.8 37 60-96 52-88 (460)
420 3gvi_A Malate dehydrogenase; N 91.7 0.13 4.5E-06 49.1 4.3 37 60-96 5-42 (324)
421 3ius_A Uncharacterized conserv 91.7 0.13 4.3E-06 48.1 4.1 34 62-95 5-38 (286)
422 1pjq_A CYSG, siroheme synthase 91.7 0.097 3.3E-06 52.7 3.6 35 61-95 11-45 (457)
423 1jw9_B Molybdopterin biosynthe 91.7 0.098 3.3E-06 48.0 3.3 34 62-95 31-65 (249)
424 1pjc_A Protein (L-alanine dehy 91.7 0.12 4.2E-06 50.3 4.2 34 62-95 167-200 (361)
425 3k96_A Glycerol-3-phosphate de 91.7 0.15 5E-06 49.6 4.7 34 62-95 29-62 (356)
426 3hn2_A 2-dehydropantoate 2-red 91.6 0.092 3.2E-06 50.0 3.2 33 63-95 3-35 (312)
427 2aef_A Calcium-gated potassium 91.6 0.1 3.4E-06 47.3 3.3 33 62-95 9-41 (234)
428 3gg2_A Sugar dehydrogenase, UD 91.6 0.11 3.9E-06 52.1 3.9 33 63-95 3-35 (450)
429 1t2d_A LDH-P, L-lactate dehydr 91.5 0.15 5E-06 48.8 4.4 34 62-95 4-38 (322)
430 4id9_A Short-chain dehydrogena 91.5 0.11 3.7E-06 50.1 3.6 39 58-96 15-54 (347)
431 2hjr_A Malate dehydrogenase; m 91.5 0.14 4.9E-06 49.0 4.3 34 63-96 15-49 (328)
432 3l9w_A Glutathione-regulated p 91.3 0.13 4.3E-06 51.1 3.8 35 62-96 4-38 (413)
433 2iid_A L-amino-acid oxidase; f 91.3 0.2 6.7E-06 51.0 5.4 32 231-276 34-65 (498)
434 3dhn_A NAD-dependent epimerase 91.3 0.16 5.6E-06 45.4 4.3 34 62-95 4-38 (227)
435 2v6b_A L-LDH, L-lactate dehydr 91.3 0.14 4.6E-06 48.6 3.9 33 63-95 1-35 (304)
436 1hdo_A Biliverdin IX beta redu 91.2 0.16 5.5E-06 44.5 4.1 33 63-95 4-37 (206)
437 3tl2_A Malate dehydrogenase; c 91.2 0.16 5.4E-06 48.4 4.3 34 61-94 7-41 (315)
438 2vns_A Metalloreductase steap3 91.2 0.13 4.5E-06 45.9 3.6 34 62-95 28-61 (215)
439 3ka7_A Oxidoreductase; structu 91.1 0.17 5.7E-06 50.2 4.6 32 232-277 2-33 (425)
440 3orq_A N5-carboxyaminoimidazol 91.1 0.23 7.9E-06 48.6 5.5 36 61-96 11-46 (377)
441 1y6j_A L-lactate dehydrogenase 91.1 0.16 5.4E-06 48.5 4.2 34 62-95 7-42 (318)
442 3dme_A Conserved exported prot 91.1 0.14 4.7E-06 49.6 3.9 31 232-276 6-36 (369)
443 3d0o_A L-LDH 1, L-lactate dehy 90.9 0.14 4.9E-06 48.8 3.7 35 61-95 5-41 (317)
444 1evy_A Glycerol-3-phosphate de 90.9 0.14 4.9E-06 49.8 3.8 32 64-95 17-48 (366)
445 3qsg_A NAD-binding phosphogluc 90.9 0.12 4.1E-06 49.2 3.2 36 60-95 22-58 (312)
446 1zcj_A Peroxisomal bifunctiona 90.9 0.22 7.5E-06 50.3 5.2 35 61-95 36-70 (463)
447 4huj_A Uncharacterized protein 90.9 0.087 3E-06 47.4 2.0 35 61-95 22-57 (220)
448 3p7m_A Malate dehydrogenase; p 90.9 0.19 6.5E-06 48.0 4.4 36 61-96 4-40 (321)
449 2eez_A Alanine dehydrogenase; 90.8 0.17 5.7E-06 49.5 4.2 34 62-95 166-199 (369)
450 1zej_A HBD-9, 3-hydroxyacyl-CO 90.8 0.2 6.8E-06 47.1 4.5 34 61-95 11-44 (293)
451 1y56_B Sarcosine oxidase; dehy 90.8 0.15 5.2E-06 49.7 3.9 32 232-277 7-38 (382)
452 3qha_A Putative oxidoreductase 90.8 0.19 6.3E-06 47.5 4.3 35 62-96 15-49 (296)
453 1dlj_A UDP-glucose dehydrogena 90.8 0.19 6.6E-06 49.7 4.6 31 64-95 2-32 (402)
454 2ewd_A Lactate dehydrogenase,; 90.7 0.16 5.6E-06 48.4 3.9 35 62-96 4-39 (317)
455 2h78_A Hibadh, 3-hydroxyisobut 90.7 0.15 5E-06 48.2 3.6 34 62-95 3-36 (302)
456 1c0p_A D-amino acid oxidase; a 90.7 0.19 6.4E-06 48.8 4.4 31 232-276 8-38 (363)
457 3fwz_A Inner membrane protein 90.6 0.64 2.2E-05 38.1 7.0 76 231-335 8-83 (140)
458 3g5s_A Methylenetetrahydrofola 90.6 0.18 6.3E-06 49.3 4.0 42 356-407 321-362 (443)
459 2gf3_A MSOX, monomeric sarcosi 90.6 0.16 5.6E-06 49.6 3.9 32 232-277 5-36 (389)
460 1jay_A Coenzyme F420H2:NADP+ o 90.6 0.22 7.5E-06 44.2 4.4 32 64-95 2-34 (212)
461 1kf6_A Fumarate reductase flav 90.6 0.34 1.2E-05 50.6 6.5 34 62-95 5-40 (602)
462 3g0o_A 3-hydroxyisobutyrate de 90.6 0.18 6.3E-06 47.6 4.1 34 62-95 7-40 (303)
463 3ew7_A LMO0794 protein; Q8Y8U8 90.5 0.19 6.4E-06 44.7 4.0 33 63-95 1-34 (221)
464 2i6t_A Ubiquitin-conjugating e 90.5 0.15 5.2E-06 48.2 3.4 34 62-95 14-49 (303)
465 1nyt_A Shikimate 5-dehydrogena 90.5 0.2 6.7E-06 46.6 4.1 34 62-95 119-152 (271)
466 2egg_A AROE, shikimate 5-dehyd 90.5 0.24 8.1E-06 46.8 4.7 34 62-95 141-175 (297)
467 3phh_A Shikimate dehydrogenase 90.5 0.21 7.1E-06 46.3 4.2 34 62-95 118-151 (269)
468 3ggo_A Prephenate dehydrogenas 90.4 0.22 7.7E-06 47.3 4.6 34 62-95 33-68 (314)
469 1mv8_A GMD, GDP-mannose 6-dehy 90.4 0.15 5.1E-06 51.1 3.5 32 64-95 2-33 (436)
470 3ego_A Probable 2-dehydropanto 90.3 0.23 7.9E-06 47.1 4.5 32 63-95 3-34 (307)
471 4b4o_A Epimerase family protei 90.3 0.19 6.5E-06 47.2 4.0 33 63-95 1-34 (298)
472 4a7p_A UDP-glucose dehydrogena 90.3 0.21 7.1E-06 50.0 4.3 35 62-96 8-42 (446)
473 2vhw_A Alanine dehydrogenase; 90.3 0.2 6.9E-06 49.1 4.2 35 61-95 167-201 (377)
474 3pef_A 6-phosphogluconate dehy 90.2 0.19 6.5E-06 47.1 3.9 33 63-95 2-34 (287)
475 3dtt_A NADP oxidoreductase; st 90.2 0.21 7.1E-06 45.7 4.0 36 60-95 17-52 (245)
476 3l6d_A Putative oxidoreductase 90.2 0.26 8.9E-06 46.7 4.8 35 61-95 8-42 (306)
477 3k7m_X 6-hydroxy-L-nicotine ox 90.2 0.2 6.8E-06 49.8 4.2 31 232-276 3-33 (431)
478 2e1m_A L-glutamate oxidase; L- 90.2 0.21 7.1E-06 48.9 4.1 33 230-276 44-76 (376)
479 1ur5_A Malate dehydrogenase; o 90.1 0.21 7.3E-06 47.4 4.1 33 63-95 3-36 (309)
480 3vku_A L-LDH, L-lactate dehydr 90.1 0.19 6.4E-06 48.0 3.7 35 61-95 8-44 (326)
481 3axb_A Putative oxidoreductase 90.1 0.38 1.3E-05 48.1 6.2 35 61-95 22-57 (448)
482 3k31_A Enoyl-(acyl-carrier-pro 90.1 0.27 9.4E-06 46.2 4.9 42 54-95 22-66 (296)
483 1ldn_A L-lactate dehydrogenase 90.0 0.21 7.1E-06 47.6 3.9 35 61-95 5-41 (316)
484 3pdu_A 3-hydroxyisobutyrate de 90.0 0.13 4.4E-06 48.3 2.4 33 63-95 2-34 (287)
485 1guz_A Malate dehydrogenase; o 89.9 0.22 7.4E-06 47.4 4.0 34 63-96 1-36 (310)
486 3g17_A Similar to 2-dehydropan 89.8 0.13 4.3E-06 48.6 2.2 33 63-95 3-35 (294)
487 3h2s_A Putative NADH-flavin re 89.8 0.23 7.9E-06 44.3 3.9 32 64-95 2-34 (224)
488 3nks_A Protoporphyrinogen oxid 89.7 0.17 5.9E-06 51.0 3.3 31 232-276 4-36 (477)
489 4gde_A UDP-galactopyranose mut 89.7 0.24 8.3E-06 50.4 4.5 31 232-276 12-43 (513)
490 1pjq_A CYSG, siroheme synthase 89.7 0.23 7.9E-06 50.0 4.1 73 230-335 12-84 (457)
491 2g1u_A Hypothetical protein TM 89.6 0.34 1.2E-05 40.6 4.6 34 229-276 18-51 (155)
492 3hwr_A 2-dehydropantoate 2-red 89.6 0.24 8.1E-06 47.3 4.0 34 61-95 18-51 (318)
493 3pqe_A L-LDH, L-lactate dehydr 89.5 0.23 7.8E-06 47.5 3.8 34 62-95 5-40 (326)
494 1z82_A Glycerol-3-phosphate de 89.5 0.25 8.4E-06 47.5 4.0 33 63-95 15-47 (335)
495 2pzm_A Putative nucleotide sug 89.4 0.38 1.3E-05 45.9 5.3 36 60-95 18-54 (330)
496 3i83_A 2-dehydropantoate 2-red 89.4 0.84 2.9E-05 43.4 7.7 76 232-336 4-84 (320)
497 3o38_A Short chain dehydrogena 89.3 0.31 1.1E-05 44.9 4.5 36 60-95 20-57 (266)
498 2we8_A Xanthine dehydrogenase; 89.3 0.3 1E-05 47.7 4.5 37 61-97 203-239 (386)
499 3qvo_A NMRA family protein; st 89.3 0.25 8.5E-06 44.7 3.7 36 60-95 21-58 (236)
500 4aj2_A L-lactate dehydrogenase 89.3 0.28 9.4E-06 47.0 4.1 35 60-94 17-53 (331)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=7.3e-74 Score=594.37 Aligned_cols=428 Identities=32% Similarity=0.620 Sum_probs=365.8
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
.++++|||||||+||+++|+.|++.+++|||||++++|.|+|++++++.|.++++++..+++++. +....++.|++++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~--~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFA--LKKKGNVTYYEAE 117 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHH--TTCSSCEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHH--HhhcCCeEEEEEE
Confidence 45689999999999999999999999999999999999999999999999999999988888763 2344679999999
Q ss_pred EEEEECCCCEEEEeeecCc---------cccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHH
Q 010845 140 CAGIDTDNHVVHCETVTDE---------LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 210 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~---------~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~ 210 (499)
|++||++++.|+++..... ......+..+++||+||||||+.++++++||++++++.+++++++.++++++
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l 197 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTF 197 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHH
Confidence 9999999999988753210 0011233468999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHH
Q 010845 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHY 289 (499)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~ 289 (499)
.++++.+..+....++++..++++|||||++|+|+|.+|++++...+.+.||.++.+.+|+++++. +++|.++++++++
T Consensus 198 ~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~ 277 (502)
T 4g6h_A 198 AANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSY 277 (502)
T ss_dssp HHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHH
T ss_pred HHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHH
Confidence 998988877666666777788999999999999999999999888787788877777899999997 7999999999999
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCCeEEE----CCC----cEEeeeEEEEcCCCCcchhc----ccCCCCCCCCCceeeCC
Q 010845 290 ATTQLSKSGVRLVRG-IVKDVDSQKLIL----NDG----TEVPYGLLVWSTGVGPSTLV----KSLDLPKSPGGRIGIDE 356 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~-~v~~v~~~~v~~----~~g----~~i~~D~vi~a~G~~p~~~~----~~~~l~~~~~G~i~vd~ 356 (499)
+.+.|+++||+++++ +|++++++++.+ .|| ++|++|+||||+|.+|+++. ..+++..+.+|+|.||+
T Consensus 278 ~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~ 357 (502)
T 4g6h_A 278 AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND 357 (502)
T ss_dssp HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT
T ss_pred HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC
Confidence 999999999999999 899999987665 355 36999999999999998644 34466678889999999
Q ss_pred CCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCC------CCCC----CcCcCCCCCCce
Q 010845 357 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGG------GRAN----SAKDMELGDPFV 426 (499)
Q Consensus 357 ~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~------~~~~----~~~~~~~~~~~~ 426 (499)
+||++++|||||+|||+.. +.|++++.|.+||+++|+||.+..+... .+.. .....++ +||.
T Consensus 358 ~lq~~~~~~IfAiGD~a~~-------~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pF~ 429 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFA-------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNF-KPFK 429 (502)
T ss_dssp TSBBTTCSSEEECGGGEES-------SSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTC-CCCC
T ss_pred ccccCCCCCEEEEEcccCC-------CCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCC-CCCE
Confidence 9999999999999999974 4689999999999999999987543100 0000 0011234 8999
Q ss_pred ecccceEEEecCCceeEeccccccCCCeEEecHHHHHHHHHHHHHhccCcchhHHhHHHHHHHhhcCCCCCC
Q 010845 427 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 498 (499)
Q Consensus 427 ~~~~g~~~~lG~~~av~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 498 (499)
|.++|+|++||.++||++++..+. .++.+.|++||++|+++|++++++||+|++|+++|++.+|||||++|
T Consensus 430 y~~~G~~a~lG~~~av~~~~~~~~-~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 430 YNDLGALAYLGSERAIATIRSGKR-TFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp CCCCEEEEECSTTCEEEEEEETTE-EEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred ecCcceEEEEeCCceEEEccCCCc-cceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 999999999999999999854211 23677899999999999999999999999999999999999999997
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3.6e-52 Score=425.49 Aligned_cols=391 Identities=19% Similarity=0.253 Sum_probs=307.4
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (499)
++|||||||+||+++|.+|++. +++|||||+++++.|+|.++++..|..+.+++..+++++.. ..+++|++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~----~~gv~~i~~~v 78 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLP----KFNIEFINEKA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGG----GGTEEEECSCE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHH----HCCcEEEEeEE
Confidence 5899999999999999999874 48999999999999999999999999999988888887632 35899999999
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (499)
++||++++.|++++ + .+++||+||||||+++. +++||++++++.+++.+++.++++++.+...
T Consensus 79 ~~Id~~~~~V~~~~---g--------~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~----- 141 (430)
T 3hyw_A 79 ESIDPDANTVTTQS---G--------KKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYA----- 141 (430)
T ss_dssp EEEETTTTEEEETT---C--------CEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHH-----
T ss_pred EEEECCCCEEEECC---C--------CEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhcc-----
Confidence 99999999998865 2 48999999999999864 5799998999999999999999988753221
Q ss_pred CCCHHHHhccccEEEeCcChHHHHHHHHHHHHHH---HHHHHhcCCCCCceEEEEEeCCCcC----CCCCHHHHHHHHHH
Q 010845 221 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIM---RDVRQRYSHVKDYIHVTLIEANEIL----SSFDDRLRHYATTQ 293 (499)
Q Consensus 221 ~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~---~~~~~~~~~~~~~~~Vtlv~~~~~l----~~~~~~~~~~~~~~ 293 (499)
.+.++|+||+ .|+|++..+.++.. ..+.+ ...+.+.+|++++..+.+ +...+...+.+++.
T Consensus 142 ---------~~~~vv~gg~-~gve~~~~~~e~a~~~~~~l~~--~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~ 209 (430)
T 3hyw_A 142 ---------NPGPVVIGAI-PGVSCFGPAYEFALMLHYELKK--RGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDL 209 (430)
T ss_dssp ---------SCCCEEEEEC-TTCCCCHHHHHHHHHHHHHHHH--TTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHH
T ss_pred ---------CCceEEEeCC-CcEEEhHHHHHHHHHHHHHHHH--hcccccceeeeecccchhhhccchhhHHHHHHHHHH
Confidence 1245555554 45555544433321 11111 223445789999887544 34556788889999
Q ss_pred HHhCCCEEEeC-ceEEEeCCeEEECC----CcEEeeeEEEEcCCCCcchhcccCCC--CCCCCCceeeCCCCCCCCCCCe
Q 010845 294 LSKSGVRLVRG-IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSLDL--PKSPGGRIGIDEWLRVPSVQDV 366 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~~~l--~~~~~G~i~vd~~l~~~~~~~I 366 (499)
++++||+++++ .|++++++.+.+++ ++++++|+++|++|++|++++..+++ ..+.+|+|.||++||++++|||
T Consensus 210 l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~I 289 (430)
T 3hyw_A 210 FAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNI 289 (430)
T ss_dssp HHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTE
T ss_pred HHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCE
Confidence 99999999999 89999999888764 35899999999999999988777764 4456788999999997799999
Q ss_pred EEeccccccccCCCC---CCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccceEEEecCCceeE
Q 010845 367 FAVGDCSGYLESTGK---TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 443 (499)
Q Consensus 367 fa~GD~a~~~~~~g~---~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lG~~~av~ 443 (499)
||+|||+.+++..+. ...|++++.|.+||+++|+||.+.++ |+ ++ +++.+...++++++|.+.+++
T Consensus 290 fAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~---g~-------~~-~~~~~~~~~~~~~~G~~~~~~ 358 (430)
T 3hyw_A 290 FGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR---NN-------PD-KYAPRLSAICIADFGEDAGFF 358 (430)
T ss_dssp EECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT---TC-------CC-CEEECCCEEEEEECSSSEEEE
T ss_pred EEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc---CC-------CC-CcccCCcEEEEEEcCCCcEEE
Confidence 999999998764432 23689999999999999999999886 32 22 555566677889999999987
Q ss_pred eccccccC--CCeEEecH---------HHHHHHHHHHHHhccCcchhHHhHHHHHHHhhcCCCCC
Q 010845 444 DLRQNKES--KGLSLAGF---------LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 497 (499)
Q Consensus 444 ~~~~~~~~--~~~~~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 497 (499)
........ ..+...|. ..|++|+..+....+.|++|+.++++|+....+.|++.
T Consensus 359 ~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 359 FADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp EEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred EEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 54321111 12334444 45677888888888999999999999999999999884
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.2e-44 Score=368.97 Aligned_cols=379 Identities=18% Similarity=0.179 Sum_probs=289.1
Q ss_pred CCcEEEECCchHHHHHHHhccC---CCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~---~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
+++|||||||+||+++|..|++ .|++|+|||+++++.|.|.++.+..+....+++..++.++. ...+++++.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----~~~gv~~~~~ 79 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYV----ERKGIHFIAQ 79 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHH----HTTTCEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHH----HHCCCEEEEe
Confidence 5799999999999999999998 79999999999999999999888888877777766666652 2367889889
Q ss_pred EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccc---cCccCCCHHHHHHHHHHHHHHHh
Q 010845 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~---~~~~~~~~~~~~~~~~~~~~~~~ 215 (499)
+|+.+|.+.+.|++++ + .++.||+||+|||+.++.+.+||+++ +.+.+++..++..+++.+...+
T Consensus 80 ~v~~id~~~~~V~~~~---g--------~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 147 (437)
T 3sx6_A 80 SAEQIDAEAQNITLAD---G--------NTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL- 147 (437)
T ss_dssp CEEEEETTTTEEEETT---S--------CEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH-
T ss_pred EEEEEEcCCCEEEECC---C--------CEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH-
Confidence 9999999999887765 2 37999999999999999999999863 5667889999998887664321
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHH------HHHHHHHHHHHHHHHHHhcCCCCCceE-EEEEeCCC-c----CCCCC
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANE-I----LSSFD 283 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~g------ve~A~~l~~~~~~~~~~~~~~~~~~~~-Vtlv~~~~-~----l~~~~ 283 (499)
+.++++|||+|+++ +|+|..++....+ ...+++.+ |+++++.+ + ++.++
T Consensus 148 -------------~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~------~g~~~~~~~Vtlv~~~~~~~~~~l~~~~ 208 (437)
T 3sx6_A 148 -------------REPGPIVIGAMAGASCFGPAYEYAMIVASDLKK------RGMRDKIPSFTFITSEPYIGHLGIQGVG 208 (437)
T ss_dssp -------------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH------TTCGGGCSCEEEEESSSSTTCTTTTCCT
T ss_pred -------------hCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH------cCCcccCcEEEEEcCCccccccccCcch
Confidence 11267899986654 9999888765421 11122245 99999874 4 33333
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEECC---------CcEEeeeEEEEcCCCCcchhccc-CCCCCCCCCce
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILND---------GTEVPYGLLVWSTGVGPSTLVKS-LDLPKSPGGRI 352 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~~---------g~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i 352 (499)
+..+.+.+.|+++||+++++ +|++++++.+++++ ++++++|++++++|+.++..+.+ .++ .+++|+|
T Consensus 209 -~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i 286 (437)
T 3sx6_A 209 -DSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFV 286 (437)
T ss_dssp -THHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCB
T ss_pred -HHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcE
Confidence 47888999999999999999 89999999887765 67899999999999998864443 566 6788999
Q ss_pred eeCCCCCCCCCCCeEEeccccccccCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecc
Q 010845 353 GIDEWLRVPSVQDVFAVGDCSGYLESTGKT---VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRH 429 (499)
Q Consensus 353 ~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~---~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (499)
.||+++|++++|||||+|||+.++...+.+ ..|++++.|.+||+.+|+||.+.+. |+ ++ .+|.+..
T Consensus 287 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~---g~-------~~-~~~~~~~ 355 (437)
T 3sx6_A 287 LVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE---GR-------KG-EQTMGTW 355 (437)
T ss_dssp CBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT---TS-------CC-CCCCCSC
T ss_pred EeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc---CC-------CC-CCcccCc
Confidence 999999999999999999999876543321 2588999999999999999999886 32 22 5655555
Q ss_pred cceE-EEecCCceeEec-ccc-ccCCCeEEecHHHHHHHHHHHHHhccCcchhHHhHHHHHHHh
Q 010845 430 LGSM-ATIGRYKALVDL-RQN-KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 490 (499)
Q Consensus 430 ~g~~-~~lG~~~av~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 490 (499)
...| +++|...++... +.. +....+.+.|.++|+++..+..+++. +.|......|+.++
T Consensus 356 ~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~~--~~~~g~~~p~~~~~ 417 (437)
T 3sx6_A 356 NAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIR--KMKMGVSEPFYEKV 417 (437)
T ss_dssp CEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHH--HHHHCCCSCCCCHH
T ss_pred ceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHHHH--HhccCCccccHHHH
Confidence 5544 568888766422 111 12245789999999887766655554 44444444554443
No 4
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2e-43 Score=361.00 Aligned_cols=300 Identities=19% Similarity=0.272 Sum_probs=248.0
Q ss_pred CcEEEECCchHHHHHHHhccCCC--CeEEEEcCCCCcccc-cchhhhhccCCCCCccc--cchhhhccccccCCCeEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVA--EPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g--~~V~lie~~~~~~~~-~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 137 (499)
+||||||||+||++||..|++.| .+|+|||+++++.|. +.++....+........ .....+ ....++.++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~ 76 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKF----YDRKQITVKT 76 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHH----HHHHCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHH----HHhcCCEEEe
Confidence 57999999999999999998876 579999999988876 44554444443322211 111121 1224566644
Q ss_pred -EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhh
Q 010845 138 -SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 138 -~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
.+|+.||.+.+.+.+.....+ +..++.||+||||||++|+.|++|| +..+.+++++++..++..+..
T Consensus 77 ~~~V~~id~~~~~~~~~~~~~~------~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~---- 144 (437)
T 4eqs_A 77 YHEVIAINDERQTVSVLNRKTN------EQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA---- 144 (437)
T ss_dssp TEEEEEEETTTTEEEEEETTTT------EEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH----
T ss_pred CCeEEEEEccCcEEEEEeccCC------ceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc----
Confidence 689999999999988764322 2457999999999999999999988 456778899999888765421
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHH
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLS 295 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~ 295 (499)
.+.++++|||||++|+|+|..+.+++ .+||++++. ++++.+++++.+.+.+.++
T Consensus 145 -----------~~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~ 199 (437)
T 4eqs_A 145 -----------NQVDKVLVVGAGYVSLEVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELD 199 (437)
T ss_dssp -----------HTCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHH
T ss_pred -----------cCCcEEEEECCccchhhhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhh
Confidence 23459999999999999999999988 899999997 7899999999999999999
Q ss_pred hCCCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecccc
Q 010845 296 KSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a 373 (499)
++||+++++ +|++++.+.+++++|+++++|.|++|+|.+|| .+++..+++++++|+|.||+++|| +.|||||+|||+
T Consensus 200 ~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~GDva 278 (437)
T 4eqs_A 200 KREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDIA 278 (437)
T ss_dssp HTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBC-SSTTEEECGGGE
T ss_pred ccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccC-CCCCEEEEEEcc
Confidence 999999999 89999999999999999999999999999999 578888999999999999999999 999999999999
Q ss_pred ccccC-CCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 374 GYLES-TGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 374 ~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
..+.. .+.+..+++++.|.+||+++|+||..
T Consensus 279 ~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 279 TSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp EEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 87653 34455678999999999999999863
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=9.3e-43 Score=356.28 Aligned_cols=370 Identities=19% Similarity=0.235 Sum_probs=282.7
Q ss_pred CcEEEECCchHHHHHHHhccC--CCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDT--SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~--~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (499)
++|||||||+||+++|..|++ .|++|+|||+++++.|.|.++....+.....++..++.... ...+++++.++|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~gv~~~~~~v 78 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLL----PKFNIEFINEKA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTG----GGGTEEEECSCE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHH----HhcCCEEEEEEE
Confidence 689999999999999999998 78999999999999999988888888877777766666552 225788988999
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (499)
+.++++.+.|.+++ + .++.||+||+|||+.+..|++.. .++...+.+.+++..+++.+...+
T Consensus 79 ~~id~~~~~v~~~~---g--------~~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~------ 140 (430)
T 3h28_A 79 ESIDPDANTVTTQS---G--------KKIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELY------ 140 (430)
T ss_dssp EEEETTTTEEEETT---C--------CEEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHH------
T ss_pred EEEECCCCEEEECC---C--------cEEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHH------
Confidence 99999999887754 2 36999999999999987653321 235567788899988877653211
Q ss_pred CCCHHHHhccccEEEeCcChHH------HHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c----CCCCCHHHHHH
Q 010845 221 GISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I----LSSFDDRLRHY 289 (499)
Q Consensus 221 ~~~~~~~~~~~~vvVvGgG~~g------ve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~----l~~~~~~~~~~ 289 (499)
+.++++|||+|+++ +|+|..++....+ . ..+++.+|+++++.. + ++.++ +..+.
T Consensus 141 --------~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~----~--g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~ 205 (430)
T 3h28_A 141 --------ANPGPVVIGAIPGVSCFGPAYEFALMLHYELKK----R--GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRL 205 (430)
T ss_dssp --------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH----T--TCGGGCCEEEECSSSSTTCTTTTCST-THHHH
T ss_pred --------hcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHH----c--CCccceEEEEecCCccccccccCcch-HHHHH
Confidence 11367889988664 9999888764421 1 222346899999874 3 23333 57888
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCCeEEECC----CcEEeeeEEEEcCCCCcchhcccC--CCCCCCCC-ceeeCCCCCCC
Q 010845 290 ATTQLSKSGVRLVRG-IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGG-RIGIDEWLRVP 361 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~-~v~~v~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~~--~l~~~~~G-~i~vd~~l~~~ 361 (499)
+.+.|++.||+++++ +|++++++.+++++ ++++++|.+++++|++|++++.++ ++ .+++| +|.||+++|++
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~ 284 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNP 284 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCS
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCC
Confidence 999999999999999 89999999988887 789999999999999998776664 67 67889 99999999998
Q ss_pred CCCCeEEeccccccccCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccceE-EEec
Q 010845 362 SVQDVFAVGDCSGYLESTGKT---VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM-ATIG 437 (499)
Q Consensus 362 ~~~~Ifa~GD~a~~~~~~g~~---~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~lG 437 (499)
++|||||+|||+.++...+.+ +.|++++.|..||+.+|+||...+. |+ + .++.+.....+ +.+|
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~---g~-------~--~~~~~~~~~~~~~~~G 352 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR---NN-------P--DKYAPRLSAICIADFG 352 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT---TC-------C--CCEEECCCEEEEEECS
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc---CC-------C--CCCcCCcceEEEEEeC
Confidence 999999999999876543321 2588999999999999999999986 32 1 23556655555 4588
Q ss_pred CCceeEec-ccc-ccCCCeEEecHHHHHHHHHHHHHhccCcchhHHh
Q 010845 438 RYKALVDL-RQN-KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 482 (499)
Q Consensus 438 ~~~av~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 482 (499)
...++... ++. +....+.+.|.++|+++..+..+++..+++-...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~~~~ 399 (430)
T 3h28_A 353 EDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIA 399 (430)
T ss_dssp SSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred CCceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHHHhccCCcC
Confidence 87776532 110 1224568899999988887777776655554433
No 6
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=4.5e-43 Score=352.16 Aligned_cols=307 Identities=19% Similarity=0.281 Sum_probs=249.6
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc-ccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF-TPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
.+++||||||||+||++||..|...+.+|+|||+++++.| .|.++....+..+.+++.....+.. . ..++.++.+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~---~-~~~i~~~~~ 82 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWY---E-KNNIKVITS 82 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHH---H-HTTCEEECS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHH---H-HCCCEEEeC
Confidence 4568999999999999999999888899999999998877 5777777777766665554444432 2 257777765
Q ss_pred -EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhc
Q 010845 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
+|+.||++++.|++.+ + .++.||+||||||+.|+.|++||.+ +++++++.+++..++..+.
T Consensus 83 ~~V~~id~~~~~v~~~~---g--------~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~------ 144 (385)
T 3klj_A 83 EFATSIDPNNKLVTLKS---G--------EKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK------ 144 (385)
T ss_dssp CCEEEEETTTTEEEETT---S--------CEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH------
T ss_pred CEEEEEECCCCEEEECC---C--------CEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh------
Confidence 8999999999988765 2 4799999999999999999999987 7888999999998877652
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC-CCHHHHHHHHHHHH
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLS 295 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~-~~~~~~~~~~~~l~ 295 (499)
..++|+|||||++|+|+|..|++.+ .+||++++. ++++. +++.+.+.+.+.++
T Consensus 145 -----------~~~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~ 199 (385)
T 3klj_A 145 -----------NKGKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLD 199 (385)
T ss_dssp -----------HHSCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHH
T ss_pred -----------cCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHH
Confidence 2359999999999999999999887 899999987 67775 89999999999999
Q ss_pred hCCCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecccc
Q 010845 296 KSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a 373 (499)
+.||+++++ .+.++ |+++++|.||+|+|++|+ ++++.++++.+ +| |.||+++|| +.|+|||+|||+
T Consensus 200 ~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA~GD~a 267 (385)
T 3klj_A 200 RLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RG-ILVNDHMET-SIKDIYACGDVA 267 (385)
T ss_dssp TTTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SS-EEECTTCBC-SSTTEEECGGGE
T ss_pred hCCCEEEeCCEEEEc---------CeEEecCeEEECcCcccChhhhhhcCCCcC-CC-EEECCCccc-CCCCEEEEEeeE
Confidence 999999998 67665 678999999999999999 68888888875 45 999999999 999999999999
Q ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCce-ecccc-eEEEecCCc
Q 010845 374 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV-YRHLG-SMATIGRYK 440 (499)
Q Consensus 374 ~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~~lG~~~ 440 (499)
.+++ ..+.++..|.+||+.+|+||.... . ++....|+. ++..+ .+.++|...
T Consensus 268 ~~~~-----~~~~~~~~A~~qg~~aa~~i~g~~-----~-----~~~~~~~~~~~~~~~~~~~~~G~~~ 321 (385)
T 3klj_A 268 EFYG-----KNPGLINIANKQGEVAGLNACGED-----A-----SYSEIIPSPILKVSGISIISCGDIE 321 (385)
T ss_dssp EETT-----BCCCCHHHHHHHHHHHHHHHTTCC-----C-----CCCCCCCCCEEEETTEEEEEESCCT
T ss_pred ecCC-----CcccHHHHHHHHHHHHHHHhcCCC-----c-----CCCCCCCcEEEEeCCCcEEEEcCCC
Confidence 7642 236789999999999999986321 1 111113444 34344 678888643
No 7
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.9e-42 Score=343.63 Aligned_cols=282 Identities=26% Similarity=0.439 Sum_probs=236.7
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc-cchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.+|||||||+||+++|..|++.| +|+|||+++...|. +.++....+..+.+.+.....+. + ...+++++.+ +|
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~---~-~~~~v~~~~g~~v 83 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDW---Y-RKRGIEIRLAEEA 83 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHH---H-HHHTEEEECSCCE
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHH---H-HhCCcEEEECCEE
Confidence 58999999999999999999999 99999999876654 66666666665555444433333 1 2257888876 69
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (499)
+.+|++.+.|. .+ + .++.||+||||||+.|+.|++|| .++++++++..++.++++.+.
T Consensus 84 ~~id~~~~~V~-~~---g--------~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~--------- 141 (367)
T 1xhc_A 84 KLIDRGRKVVI-TE---K--------GEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE--------- 141 (367)
T ss_dssp EEEETTTTEEE-ES---S--------CEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH---------
T ss_pred EEEECCCCEEE-EC---C--------cEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh---------
Confidence 99999988876 33 2 37999999999999999999999 466778889988888766542
Q ss_pred CCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCC
Q 010845 221 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGV 299 (499)
Q Consensus 221 ~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV 299 (499)
..++++|||||++|+|+|..|++++ .+|+++++. ++++ +++++.+.+.+.+++.||
T Consensus 142 --------~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV 198 (367)
T 1xhc_A 142 --------NSGEAIIIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETGV 198 (367)
T ss_dssp --------HHSEEEEEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTE
T ss_pred --------cCCcEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCC
Confidence 2259999999999999999999887 899999987 6788 999999999999999999
Q ss_pred EEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecccccccc
Q 010845 300 RLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 377 (499)
Q Consensus 300 ~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~ 377 (499)
+++++ +|.+++.+.+++++|+ +++|.||+|+|.+|+ ++++.++++.+ +| |.||+++|| +.|||||+|||+....
T Consensus 199 ~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~ 274 (367)
T 1xhc_A 199 KFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSG 274 (367)
T ss_dssp EEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEBTT
T ss_pred EEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEEeEeeeecCC
Confidence 99999 8999998889999988 999999999999999 48888888876 45 999999999 9999999999996421
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 378 STGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 378 ~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
..+++++.|.+||+.+|+||.
T Consensus 275 -----~~~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 275 -----IIAGTAKAAMEQARVLADILK 295 (367)
T ss_dssp -----BCCCSHHHHHHHHHHHHHHHT
T ss_pred -----CCccHHHHHHHHHHHHHHHhc
Confidence 235689999999999999985
No 8
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=4.1e-42 Score=349.08 Aligned_cols=316 Identities=20% Similarity=0.307 Sum_probs=256.3
Q ss_pred CcEEEECCchHHHHHHHhccCCCCe--EEEEcCCCCcccc--cchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~--V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
++|||||||+||+++|..|++.|++ |+|||+++++.|. ++...+..+......+ ...... + ...++.++.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~---~-~~~~i~~~~~ 77 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADW---Y-GEARIDMLTG 77 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTH---H-HHTTCEEEES
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHH---H-HHCCCEEEeC
Confidence 5899999999999999999999877 9999999998886 3444466666665554 222222 1 2257888887
Q ss_pred -EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhh
Q 010845 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
+|+.+|++.+.|.+.+ + .++.||+||+|||+.|+.|++||.+ +.++.+++..++..++..+
T Consensus 78 ~~v~~id~~~~~v~~~~---g--------~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~------ 140 (410)
T 3ef6_A 78 PEVTALDVQTRTISLDD---G--------TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW------ 140 (410)
T ss_dssp CCEEEEETTTTEEEETT---S--------CEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC------
T ss_pred CEEEEEECCCCEEEECC---C--------CEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh------
Confidence 9999999999888765 2 4799999999999999999999985 5677888999988876543
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHHHH
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQL 294 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~~l 294 (499)
...++|+|||+|++|+|+|..+.+.+ .+|+++++. .+++ .+++.+.+.+.+.+
T Consensus 141 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l 195 (410)
T 3ef6_A 141 -----------TSATRLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLL 195 (410)
T ss_dssp -----------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHH
T ss_pred -----------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHH
Confidence 23469999999999999999999877 899999987 5665 47899999999999
Q ss_pred HhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEE
Q 010845 295 SKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa 368 (499)
++.||+++++ .|.+++.+ .|+++||++++||.||+|+|.+|+ ++++.++++.+ +| |.||+++|| +.|+|||
T Consensus 196 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA 272 (410)
T 3ef6_A 196 TELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RG-VIVDHCGAT-LAKGVFA 272 (410)
T ss_dssp HHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEE
T ss_pred HHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-Ce-EEEccCeeE-CCCCEEE
Confidence 9999999998 89999875 689999999999999999999999 58888899887 45 999999999 9999999
Q ss_pred eccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccc--eEEEecCC
Q 010845 369 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 439 (499)
Q Consensus 369 ~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~lG~~ 439 (499)
+|||+..+...|....+++++.|..||+.+|+||... . .++.. .||.+.+.. .+.++|..
T Consensus 273 ~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~------~----~~~~~-~p~~~~~~~~~~~~~~G~~ 334 (410)
T 3ef6_A 273 VGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGK------N----VSAPQ-LPVSWTEIAGHRMQMAGDI 334 (410)
T ss_dssp CGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTC------C----CCCCB-CCEEEEEETTEEEEEESCS
T ss_pred EEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCC------C----CCCCC-CCeeEEEECCceEEEEcCC
Confidence 9999987654444445778999999999999998631 1 12232 677766643 45666653
No 9
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.3e-42 Score=352.28 Aligned_cols=350 Identities=17% Similarity=0.198 Sum_probs=264.3
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
.+||||||||+||+++|.+|++. +.+|||||+++++.|.|+++.+..|..+.+++..+++.+.+ .+++|++++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~-----~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRA-----HGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHH-----TTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHH-----CCCEEEEeE
Confidence 37899999999999999999775 46899999999999999999999999888888777776632 578999999
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccc-----cCccCCCHHHHHHHHHHHHHHH
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE-----NATFLREVHHAQEIRRKLLLNL 214 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~-----~~~~~~~~~~~~~~~~~~~~~~ 214 (499)
|+.||++++.+.+.+ ..++.||+||||||+.++++++||.++ ..+.+++.+++..+++.+...
T Consensus 77 v~~id~~~~~v~~~~-----------g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~- 144 (401)
T 3vrd_B 77 ALGIDPDKKLVKTAG-----------GAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM- 144 (401)
T ss_dssp EEEEETTTTEEEETT-----------SCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS-
T ss_pred EEEEEccCcEEEecc-----------cceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc-
Confidence 999999999998765 248999999999999999999999864 235567888888888776321
Q ss_pred hhcCCCCCCHHHHhccccEEEeCc-------ChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c--CCCCCH
Q 010845 215 MLSDVPGISEEEKSRLLHCVVVGG-------GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--LSSFDD 284 (499)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvVvGg-------G~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~--l~~~~~ 284 (499)
.. ...+|+++ +..+.|++.+++++.. +.. ...+|++++..+ + ++.+++
T Consensus 145 -------------~~-~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~----~~~----~~~~v~i~~~~~~~~~~~~~~~ 202 (401)
T 3vrd_B 145 -------------DD-GGVVIIAPPAPPFRCPPGPYERASQIAHYLK----AHK----SKSKVIILDNSQTFSKQAQFTK 202 (401)
T ss_dssp -------------CT-TCEEEEECCSSSCBCTTHHHHHHHHHHHHHH----HHC----TTCEEEEECSSSSCTTHHHHHH
T ss_pred -------------cc-CCcEEEecCCccEEeehHHHHHHHHHHHHHH----hcC----CCCEEEEEcccccccccccccH
Confidence 01 13344433 3456777777766542 122 237899999864 3 234566
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC----CeEEECCCcEEeeeEEEEcCCCCcchhcccCCCCCCCCCceeeCCC-C
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS----QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEW-L 358 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~-l 358 (499)
.+.+.+.+.+++.||+++++ ++..++. ..+.+++|+++++|+++|++|++|+++++++++ .+++|+|.||++ |
T Consensus 203 ~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl 281 (401)
T 3vrd_B 203 GWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTF 281 (401)
T ss_dssp HHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTC
T ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhccc-cccCCCEEECCCcc
Confidence 77777777788999999998 6666643 268899999999999999999999999999998 578899999987 8
Q ss_pred CCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccceE-EEec
Q 010845 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM-ATIG 437 (499)
Q Consensus 359 ~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~lG 437 (499)
|++++|||||+|||+. ..+.|++++.|.+||+++|+||.+.++ |+ ++ .|+.|.....+ +..|
T Consensus 282 ~~t~~p~VfAiGDva~------~~~~pk~a~~A~~qa~v~A~ni~~~l~---G~-------~~-~~~~y~~~~~~~~~~~ 344 (401)
T 3vrd_B 282 ESSLQPGIHVIGDACN------AAPMPKSAYSANSQAKVAAAAVVALLK---GE-------EP-GTPSYLNTCYSILAPG 344 (401)
T ss_dssp BBSSSTTEEECGGGBC------CTTSCBSHHHHHHHHHHHHHHHHHHHH---TC-------CC-CCCCEEEEEEEEEETT
T ss_pred eecCCCCEEEeccccc------CCCCCchHHHHHHHHHHHHHHHHHHhc---CC-------CC-CCcccCCeEEEEEecC
Confidence 8779999999999995 245689999999999999999999987 33 22 56666655433 2222
Q ss_pred CCceeEecccc----------ccCCCeEEecHHHHHHHHHH
Q 010845 438 RYKALVDLRQN----------KESKGLSLAGFLSWLVWRSA 468 (499)
Q Consensus 438 ~~~av~~~~~~----------~~~~~~~~~g~~~~~~~~~~ 468 (499)
....+...+.. ...++....++.+|++|+..
T Consensus 345 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (401)
T 3vrd_B 345 YGISIAAVYRPNAEGKAIEAVPDSGGITPVDAPDWVLEREV 385 (401)
T ss_dssp EEEEEEEEEEECTTSSSEEECTTCCEESCTTCCHHHHHHHH
T ss_pred CceEEEEEecccCCCceEEEecccCCcccccchhHHHhccc
Confidence 22222211110 01234556678899987743
No 10
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.4e-41 Score=345.98 Aligned_cols=320 Identities=21% Similarity=0.367 Sum_probs=256.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCe--EEEEcCCCCcccc--cchhhhhccCCCCCccccchhhhccccccCCCeEEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~--V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (499)
.+++|||||||+||+++|..|++.|++ |+|||+++++.|. ++...+..+......+....... ....++.++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~ 83 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQF----WEDKAVEMK 83 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHH----HHHTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHH----HHHCCcEEE
Confidence 357999999999999999999999887 9999999988776 33334555554444443333322 123678888
Q ss_pred EE-EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHH
Q 010845 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (499)
Q Consensus 137 ~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (499)
.+ +|+.+|.+.+.|.+.+ + ..+.||+||+|||+.|+.|++||.+ +.++.+++.+++..++..+.
T Consensus 84 ~~~~v~~id~~~~~v~~~~---g--------~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~--- 149 (415)
T 3lxd_A 84 LGAEVVSLDPAAHTVKLGD---G--------SAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD--- 149 (415)
T ss_dssp ETCCEEEEETTTTEEEETT---S--------CEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH---
T ss_pred eCCEEEEEECCCCEEEECC---C--------CEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh---
Confidence 86 9999999999988754 2 4799999999999999999999985 56778889999888876542
Q ss_pred hhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHH
Q 010845 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATT 292 (499)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~ 292 (499)
...++++|||+|++|+|+|..+...+ .+|+++++. .+++ .+++.+.+.+.+
T Consensus 150 -------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~ 202 (415)
T 3lxd_A 150 -------------AGAKNAVVIGGGYIGLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQA 202 (415)
T ss_dssp -------------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred -------------hcCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHHH
Confidence 01469999999999999999999887 899999987 5666 579999999999
Q ss_pred HHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCC
Q 010845 293 QLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQD 365 (499)
Q Consensus 293 ~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~ 365 (499)
.+++.||+++++ .|.+++.+ .|.+++|++++||.||+|+|.+|+ ++++.++++.+ +| |.||+++|| +.|+
T Consensus 203 ~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~ 279 (415)
T 3lxd_A 203 EHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NG-VDVDEFCRT-SLTD 279 (415)
T ss_dssp HHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SS-EECCTTCBC-SSTT
T ss_pred HHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CC-EEECCCCCc-CCCC
Confidence 999999999999 89998753 588899999999999999999999 58888898876 45 999999999 9999
Q ss_pred eEEeccccccccC-C-CCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccc--eEEEecCC
Q 010845 366 VFAVGDCSGYLES-T-GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 439 (499)
Q Consensus 366 Ifa~GD~a~~~~~-~-g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~lG~~ 439 (499)
|||+|||+..+.+ . |....+.+++.|.+||+.+|+||... . .++.. .||.+.++. .+.++|..
T Consensus 280 iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~------~----~~~~~-~p~~~~~~~~~~~~~~G~~ 346 (415)
T 3lxd_A 280 VYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA------P----VPYKA-TPWFWSNQYDLKLQTVGLS 346 (415)
T ss_dssp EEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTC------C----CCCCC-CCEEEEEETTEEEEEEECC
T ss_pred EEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCC------C----CCCCC-CCeeEeeeCCcEEEEEeCC
Confidence 9999999987653 2 44556678999999999999998631 1 12233 677776664 45666753
No 11
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.1e-41 Score=344.14 Aligned_cols=306 Identities=21% Similarity=0.295 Sum_probs=256.4
Q ss_pred CCcEEEECCchHHHHHHHhccC---CCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~---~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
|++|||||||+||+++|..|++ .|++|+|||+++++.|.|.++....+.....++...+.+... ..+++++.+
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~gv~~~~~ 76 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALP----EKGIQFQEG 76 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTG----GGTCEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHh----hCCeEEEEe
Confidence 3689999999999999999999 899999999999999988887777777777777777776532 257888889
Q ss_pred EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcC
Q 010845 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (499)
+|+.++.+.+.|++.+... +..++.||+||+|||+.++.+.+||++++...+.+.+++..+++.+..
T Consensus 77 ~v~~i~~~~~~V~~~~g~~-------~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~------ 143 (409)
T 3h8l_A 77 TVEKIDAKSSMVYYTKPDG-------SMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLES------ 143 (409)
T ss_dssp EEEEEETTTTEEEEECTTS-------CEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHH------
T ss_pred eEEEEeCCCCEEEEccCCc-------ccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHH------
Confidence 9999999999998876221 134699999999999999999999997777778888888888877632
Q ss_pred CCCCCHHHHhccccEEEeCcCh-------------------------HHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEE
Q 010845 219 VPGISEEEKSRLLHCVVVGGGP-------------------------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 273 (499)
Q Consensus 219 ~p~~~~~~~~~~~~vvVvGgG~-------------------------~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv 273 (499)
..++++|||+|. .++|+|..+++...+ ...+++.+|+++
T Consensus 144 ----------~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~ 207 (409)
T 3h8l_A 144 ----------FQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVF 207 (409)
T ss_dssp ----------CCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEE
T ss_pred ----------hcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEE
Confidence 013677999992 588999888765421 122344799999
Q ss_pred eCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCcchhcccCCCC-CCCCCc
Q 010845 274 EANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP-KSPGGR 351 (499)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~-~~~~G~ 351 (499)
++.++++.+++.+.+.+.+.+++.||+++++ +|+++++++|+++||+++++|+||+++|+.|++++..++.. .+++|+
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~ 287 (409)
T 3h8l_A 208 SPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGF 287 (409)
T ss_dssp CSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSC
T ss_pred eCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCC
Confidence 9977888889999999999999999999998 89999999999999999999999999999999888877322 467899
Q ss_pred eeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 352 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 352 i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|.||+++|++++|||||+|||+.+ +.|+++..|..||+++|+||...+.
T Consensus 288 i~vd~~~~~~~~~~vfa~GD~~~~-------~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 288 IPTDLNMVSIKYDNVYAVGDANSM-------TVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp BCBBTTSBBSSCTTEEECGGGBTT-------CCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeCcccccCCCCCEEEeehhccC-------CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999899999999999964 3488999999999999999998874
No 12
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4e-41 Score=341.32 Aligned_cols=317 Identities=21% Similarity=0.384 Sum_probs=254.6
Q ss_pred CcEEEECCchHHHHHHHhccCCCC--eEEEEcCCCCcccc--cchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
++|||||||+||+++|..|++.|+ +|+|||+++++.|. ++...+..+......+....... + ...++.++.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~---~-~~~~i~~~~~ 77 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKF---F-QDQAIELISD 77 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHH---H-HHTTEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHH---H-HhCCCEEEEE
Confidence 689999999999999999999988 89999999988776 33335566655555444433332 1 2257888779
Q ss_pred EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhhc
Q 010845 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
+|+.+|++.+.+.+.+ + .++.||+||+|||+.|+.|++||.+ +.++.+++..++..++..+
T Consensus 78 ~v~~id~~~~~v~~~~---g--------~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------- 139 (404)
T 3fg2_P 78 RMVSIDREGRKLLLAS---G--------TAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------- 139 (404)
T ss_dssp CEEEEETTTTEEEESS---S--------CEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG-------
T ss_pred EEEEEECCCCEEEECC---C--------CEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh-------
Confidence 9999999999988765 2 4789999999999999999999975 5677888998888876653
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHHHHH
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLS 295 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~~l~ 295 (499)
...++++|||+|++|+|+|..+...+ .+|+++++. .+++ .+++.+.+.+.+.++
T Consensus 140 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~ 195 (404)
T 3fg2_P 140 ----------PDKKHVVVIGAGFIGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHS 195 (404)
T ss_dssp ----------GGCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHH
Confidence 23469999999999999999999877 899999987 5665 578999999999999
Q ss_pred hCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEE
Q 010845 296 KSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa 368 (499)
+.||+++++ +|.+++.+ +|.++||++++||.||+|+|.+|+ ++++.++++.+ +| |.||+++|| +.|+|||
T Consensus 196 ~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~G-i~vd~~~~t-~~~~iya 272 (404)
T 3fg2_P 196 GAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AG-IIVDQQLLT-SDPHISA 272 (404)
T ss_dssp HTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EEECTTSBC-SSTTEEE
T ss_pred hCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEE
Confidence 999999999 89998753 588899999999999999999999 48888898887 45 999999999 9999999
Q ss_pred eccccccccC-CCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccc--eEEEecCC
Q 010845 369 VGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 439 (499)
Q Consensus 369 ~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~lG~~ 439 (499)
+|||+..+.+ .|....+.+++.|..||+.+|+||... . .++.. .||.+.++. .+.++|..
T Consensus 273 ~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~------~----~~~~~-~p~~~~~~~~~~~~~~G~~ 335 (404)
T 3fg2_P 273 IGDCALFESVRFGETMRVESVQNATDQARCVAARLTGD------A----KPYDG-YPWFWSDQGDDKLQIVGLT 335 (404)
T ss_dssp CGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTC------C----CCCCC-CCEEEEEETTEEEEEEECC
T ss_pred eecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCC------C----CCCCC-CCceEeEECCcEEEEEeCC
Confidence 9999987642 233334667999999999999998521 1 12233 677777665 44666643
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=9e-41 Score=338.85 Aligned_cols=314 Identities=23% Similarity=0.332 Sum_probs=245.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCCCcccc-cch-hhhhccCCCCCccccchhhhccccccCCCeEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-PLL-ASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (499)
+++|+|||||+||+++|..|++.|+ +|+|||+++++.|. +.+ ..+..+.. .+... ++ .....++.++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-----~~~~~~v~~~~ 78 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIR--LD-----CKRAPEVEWLL 78 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSB--CC-----CTTSCSCEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhh--HH-----HHHHCCCEEEc
Confidence 4789999999999999999999887 49999999887665 222 23333332 22111 11 12335788887
Q ss_pred E-EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCC-CCccccCccCCCHHHHHHHHHHHHHHHh
Q 010845 138 S-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI-HGVKENATFLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 138 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~i-pG~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (499)
+ +|+.+|.+.+.|.+.+ + .++.||+||+|||+.|..|++ ||.+++++++.+.+++..+++.+
T Consensus 79 ~~~v~~i~~~~~~v~~~~---g--------~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~----- 142 (408)
T 2gqw_A 79 GVTAQSFDPQAHTVALSD---G--------RTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL----- 142 (408)
T ss_dssp TCCEEEEETTTTEEEETT---S--------CEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC-----
T ss_pred CCEEEEEECCCCEEEECC---C--------CEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh-----
Confidence 7 4999999988888754 2 379999999999999999999 99866677788888887765432
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHHH
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQ 293 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~~ 293 (499)
...++|+|||||++|+|+|..|.+.+ .+|+++++. ++++ .+++++.+.+.+.
T Consensus 143 ------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 196 (408)
T 2gqw_A 143 ------------RPQSRLLIVGGGVIGLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVARY 196 (408)
T ss_dssp ------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHH
T ss_pred ------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHHH
Confidence 12359999999999999999999877 899999997 6777 4899999999999
Q ss_pred HHhCCCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecc
Q 010845 294 LSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD 371 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD 371 (499)
+++.||+++++ +|.+++++.|++++|++++||.||+|+|.+|+ ++++.++++.+ +| |.||+++|| +.|+|||+||
T Consensus 197 l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD 273 (408)
T 2gqw_A 197 HAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD-DG-IFVDAYGRT-TCPDVYALGD 273 (408)
T ss_dssp HHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBS-SS-EECCTTCBC-SSTTEEECGG
T ss_pred HHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCC-CC-EEECCCCcc-CCCCEEEEEE
Confidence 99999999999 89999855888999999999999999999999 68888888876 46 999999999 9999999999
Q ss_pred ccccccCC-CCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCCCCceecccc--eEEEecC
Q 010845 372 CSGYLEST-GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGR 438 (499)
Q Consensus 372 ~a~~~~~~-g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~lG~ 438 (499)
|+..+.+. |....+++++.|.+||+++|+||.... . .+++. .|+.+.... .+.++|.
T Consensus 274 ~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-----~----~~~~~-~p~~~~~~~~~~~~~~G~ 333 (408)
T 2gqw_A 274 VTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT-----A----PGYAE-LPWYWSDQGALRIQVAGL 333 (408)
T ss_dssp GEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT-----S----CCCCC-CCEEEEEETTEEEEEEEC
T ss_pred EEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC-----C----CcCCC-CCeEEEEECCceEEEECC
Confidence 99865321 222235578999999999999986321 0 02232 577665542 5666764
No 14
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.3e-40 Score=344.57 Aligned_cols=306 Identities=24% Similarity=0.342 Sum_probs=229.0
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCCCCCccccc----hhhhccccccCCCeE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEP----IARIQPAISREPGSY 134 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~ 134 (499)
+++|||||||+||+++|..|++. |++|+|||+++.+.|.+. ++....+......-..+ +......+....++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999987 899999999999877643 44444443322111100 111222233335666
Q ss_pred EE-EEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHH
Q 010845 135 FF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (499)
Q Consensus 135 ~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~ 212 (499)
+. ..+|+.++.+.+.+.+.+..++ +...+.||+||+|||+.|..|++||.+ +..+.+.+..++..++..+.
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~- 155 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTG------ERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS- 155 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTC------CEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCC-
T ss_pred EEECCEEEEEECCCCEEEEeecCCC------CEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh-
Confidence 64 5799999999999988763222 134799999999999999999999984 56677888888877665431
Q ss_pred HHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHH-HHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHH
Q 010845 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHY 289 (499)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~-~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~ 289 (499)
....++++|||+|++|+|+|..+..+ + .+|+++++. .+++ .+++++.+.
T Consensus 156 --------------~~~~~~vvViGgG~~g~e~A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~ 207 (472)
T 3iwa_A 156 --------------AGEVSKAVIVGGGFIGLEMAVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQM 207 (472)
T ss_dssp --------------TTSCSEEEEECCSHHHHHHHHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHH
T ss_pred --------------cCCCCEEEEECCCHHHHHHHHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHH
Confidence 01235999999999999999999987 6 899999987 6888 899999999
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeC-C-e--EEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCC
Q 010845 290 ATTQLSKSGVRLVRG-IVKDVDS-Q-K--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSV 363 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~-~v~~v~~-~-~--v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~ 363 (499)
+.+.+++.||+++++ +|.+++. + . +.+++|+++++|.||+|+|++|+ .+++.++++++++|+|.||+++|| +.
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t-~~ 286 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SD 286 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBC-SS
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCccc-CC
Confidence 999999999999999 8999875 3 2 67788999999999999999999 577788999999999999999999 99
Q ss_pred CCeEEeccccccccCC-CCCCCCchHHHHHHHHHHHHHHHH
Q 010845 364 QDVFAVGDCSGYLEST-GKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 364 ~~Ifa~GD~a~~~~~~-g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|||||+|||+..+... |....+++++.|.+||+++|+||.
T Consensus 287 ~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 287 PDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp TTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred CCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 9999999999876543 444457789999999999999986
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.9e-40 Score=346.87 Aligned_cols=302 Identities=23% Similarity=0.347 Sum_probs=244.8
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCCCCC-c-cccchhhhccccccCCCeEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFR-S-VAEPIARIQPAISREPGSYFF 136 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 136 (499)
|++|||||||+||+++|..|++. +++|+|||+++++.|.+. ++....+..... . +......+ ....++.+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~ 76 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESF----KARFNVEVR 76 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHH----HHHHCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHH----HHhcCcEEE
Confidence 36899999999999999999986 789999999999888753 444444443321 1 22222222 222356664
Q ss_pred -EEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHH
Q 010845 137 -LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (499)
Q Consensus 137 -~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (499)
..+|+.+|.+.+.+.+.+..++ +..++.||+||||||+.|..|++||.+ ...+.+++..++..+.+.+..
T Consensus 77 ~~~~V~~id~~~~~v~~~~~~~g------~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~-- 148 (565)
T 3ntd_A 77 VKHEVVAIDRAAKLVTVRRLLDG------SEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM-- 148 (565)
T ss_dssp TTEEEEEEETTTTEEEEEETTTC------CEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH--
T ss_pred ECCEEEEEECCCCEEEEEecCCC------CeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh--
Confidence 5899999999999988763322 234799999999999999999999984 567788888888777665421
Q ss_pred hhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHH
Q 010845 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293 (499)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~ 293 (499)
...++|+|||||++|+|+|..+.+.+ .+|+++++. ++++.+++++.+.+.+.
T Consensus 149 -------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~ 201 (565)
T 3ntd_A 149 -------------NNVEHATVVGGGFIGLEMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQA 201 (565)
T ss_dssp -------------TTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHH
T ss_pred -------------CCCCEEEEECCCHHHHHHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHH
Confidence 23359999999999999999999887 899999987 78899999999999999
Q ss_pred HHhCCCEEEeC-ceEEEeC--------------------C---eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCC
Q 010845 294 LSKSGVRLVRG-IVKDVDS--------------------Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSP 348 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~--------------------~---~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~ 348 (499)
+++.||+++++ .|.+++. + .+++++|+++++|.||+|+|++|+ .+++.+++++++
T Consensus 202 l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~ 281 (565)
T 3ntd_A 202 IRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGE 281 (565)
T ss_dssp HHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCT
T ss_pred HHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCC
Confidence 99999999998 8888864 2 466788999999999999999999 577788999999
Q ss_pred CCceeeCCCCCCCCCCCeEEeccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 349 GGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 349 ~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|+|.||+++|| +.|||||+|||+..++. .|....+++++.|.+||+++|+||.
T Consensus 282 ~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 282 LGGIKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp TSSBCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999976653 2444467889999999999999986
No 16
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.3e-39 Score=344.04 Aligned_cols=304 Identities=23% Similarity=0.354 Sum_probs=249.6
Q ss_pred CCCCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCccccc-chhhhhccCCCCCc--cccchhhhccccccCCCeE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTP-LLASTCVGTLEFRS--VAEPIARIQPAISREPGSY 134 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~-~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~ 134 (499)
+.+++|||||||+||+++|..|++. |++|+|||+++.+.|.+ .++....+...... +...+..+ ....++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~----~~~~gi~ 109 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERM----SKRFNLD 109 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHH----HHHTTCE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHH----HHhcCcE
Confidence 4468999999999999999999987 89999999999988875 34544555433221 22333333 2224566
Q ss_pred EE-EEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCc-c-ccCccCCCHHHHHHHHHHHH
Q 010845 135 FF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-K-ENATFLREVHHAQEIRRKLL 211 (499)
Q Consensus 135 ~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~-~-~~~~~~~~~~~~~~~~~~~~ 211 (499)
+. ..+|+.++.+.+.+.+.+..++ +...+.||+||+|||+.|..|++||. + +..+..++..++..++..+.
T Consensus 110 v~~~~~V~~id~~~~~v~v~~~~~g------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~ 183 (588)
T 3ics_A 110 IRVLSEVVKINKEEKTITIKNVTTN------ETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYID 183 (588)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTC------CEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHH
T ss_pred EEECCEEEEEECCCCEEEEeecCCC------CEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHh
Confidence 64 5799999999999988753222 13478999999999999999999998 3 45677888888887766542
Q ss_pred HHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHH
Q 010845 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYA 290 (499)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~ 290 (499)
. ...++++|||||++|+|+|..+...+ .+|+++++. .+++.+++++.+.+
T Consensus 184 ~---------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l 234 (588)
T 3ics_A 184 E---------------KKPRHATVIGGGFIGVEMVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYV 234 (588)
T ss_dssp H---------------HCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHH
T ss_pred h---------------cCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHH
Confidence 1 23469999999999999999999887 899999986 78899999999999
Q ss_pred HHHHHhCCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCe
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~I 366 (499)
.+.|++.||+++++ +|.+++. +.|.+++|+++++|.||+|+|++|+ .+++.++++++++|+|.||+++|| +.|+|
T Consensus 235 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t-~~~~I 313 (588)
T 3ics_A 235 HEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHI 313 (588)
T ss_dssp HHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBC-SSTTE
T ss_pred HHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCcccc-CCCCE
Confidence 99999999999998 8999987 5799999999999999999999999 488888999999999999999999 99999
Q ss_pred EEeccccccccCC-CCCCCCchHHHHHHHHHHHHHHHH
Q 010845 367 FAVGDCSGYLEST-GKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 367 fa~GD~a~~~~~~-g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
||+|||+..++.. |....+++++.|.+||+++|+||.
T Consensus 314 yA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 314 YAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIH 351 (588)
T ss_dssp EECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhc
Confidence 9999999765532 444457899999999999999986
No 17
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=8.2e-40 Score=336.32 Aligned_cols=298 Identities=23% Similarity=0.315 Sum_probs=228.9
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
+++|||||||+||+++|..|++. +++|+|||+++.+.|.+. ++....+......+..... ..+....++.++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~gi~v~~~ 79 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPP---EVFIKKRGIDLHLN 79 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------CTHHHHTTCEEETT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCH---HHHHHhcCcEEEec
Confidence 57999999999999999999986 789999999998777653 3333333322222221111 11222356777776
Q ss_pred -EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhh
Q 010845 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
+|+.++.+.+.+.+.+ + ..++.||+||+|||+.|..|++||.+ +.++...+..++..+.+.+.
T Consensus 80 ~~v~~i~~~~~~v~~~~---g-------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~----- 144 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENG---G-------EKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME----- 144 (449)
T ss_dssp CEEEEECSSEEEEECSS---S-------EEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS-----
T ss_pred CEEEEEecCCCEEEECC---c-------eEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH-----
Confidence 8999988776664322 1 24799999999999999999999985 45667777777777665431
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC-CCHHHHHHHHHHH
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~-~~~~~~~~~~~~l 294 (499)
....++++|||||++|+|+|..+.+.+ .+|+++++. ++++. +++++.+.+.+.+
T Consensus 145 ----------~~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 200 (449)
T 3kd9_A 145 ----------KYKVENVVIIGGGYIGIEMAEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKL 200 (449)
T ss_dssp ----------SSCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHH
Confidence 013469999999999999999999887 899999987 68887 9999999999999
Q ss_pred HhCCCEEEeC-ceEEEeCCe---EEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEEe
Q 010845 295 SKSGVRLVRG-IVKDVDSQK---LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAV 369 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~~~~---v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~ 369 (499)
++. |+++.+ .|.+++.+. ..+.+++++++|.||+|+|++|+ ++++.++++++++|+|.||+++|| +.|||||+
T Consensus 201 ~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~ 278 (449)
T 3kd9_A 201 KKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQT-SVENVYAA 278 (449)
T ss_dssp TTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEEC
T ss_pred HhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCcc-CCCCEEEe
Confidence 999 999999 899998653 34567889999999999999999 578888999999999999999999 99999999
Q ss_pred ccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 370 GDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 370 GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|||+..++. .|.+..+++++.|.+||+++|+||.
T Consensus 279 GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 279 GDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp STTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred eeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 999976553 2444457899999999999999985
No 18
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=4.2e-39 Score=334.32 Aligned_cols=297 Identities=24% Similarity=0.323 Sum_probs=234.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCC---CeEEEEcCCCCcccccc-hhhhhccC-CCCCccccchhhhccccccCCCeEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL---YDVVCVSPRNHMVFTPL-LASTCVGT-LEFRSVAEPIARIQPAISREPGSYFF 136 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g---~~V~lie~~~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (499)
+++|||||||+||+++|..|++.| ++|+|||+++.+.|.+. ++....+. .....+.....+. +. ..++.++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~gv~v~ 110 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEE---LE-SLGAKVY 110 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHH---HH-HTTCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHH---HH-hCCCEEE
Confidence 479999999999999999999887 99999999987766653 22233333 2233332222222 22 2467764
Q ss_pred -EEEEEEEECCCCEEEEe-eecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc------------ccCccCCCHHH
Q 010845 137 -LSHCAGIDTDNHVVHCE-TVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK------------ENATFLREVHH 202 (499)
Q Consensus 137 -~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~------------~~~~~~~~~~~ 202 (499)
..+|+.++.+.+.|.+. + + +..++.||+||||||+.|..|++||.+ +.+++++++.+
T Consensus 111 ~~~~v~~i~~~~~~v~v~~~---g------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 111 MESPVQSIDYDAKTVTALVD---G------KNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp TTCCEEEEETTTTEEEEEET---T------EEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred eCCEEEEEECCCCEEEEEeC---C------cEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHH
Confidence 45799999999988876 3 1 124799999999999999999999975 35677888888
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-
Q 010845 203 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS- 280 (499)
Q Consensus 203 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~- 280 (499)
+..+.+.+. ....++|+|||||++|+|+|..|++.+ .+|+++++. ++++
T Consensus 182 ~~~~~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~ 232 (490)
T 2bc0_A 182 SADVIAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAG 232 (490)
T ss_dssp HHHHHHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTT
T ss_pred HHHHHHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhh
Confidence 877755420 022359999999999999999999887 899999987 6787
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCe----EEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceee
Q 010845 281 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGI 354 (499)
Q Consensus 281 ~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~----v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~v 354 (499)
.+++++.+.+.+.+++.||+++++ +|++++.++ +.+ +|+++++|.||+|+|++|+ ++++.. ++++++|+|.|
T Consensus 233 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~V 310 (490)
T 2bc0_A 233 YYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLV 310 (490)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEE
Confidence 789999999999999999999999 899997652 555 7789999999999999999 566666 77888899999
Q ss_pred CCCCCCCCCCCeEEeccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 355 DEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 355 d~~l~~~~~~~Ifa~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|+++|| +.|+|||+|||+..+.. .|+...+++++.|.+||+++|+||.
T Consensus 311 d~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 311 NKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp CTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 999999 99999999999975432 2223346789999999999999985
No 19
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.4e-38 Score=329.58 Aligned_cols=302 Identities=20% Similarity=0.325 Sum_probs=238.8
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCCC-CCccccchhhhccccccCCCeEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLE-FRSVAEPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (499)
+++|||||||+||+++|..|++. |.+|+|||+++.+.|.+. ++....+... ...+.....+ .+.+..++.++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~gv~~~~ 112 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVK---TFRDKYGIDAKV 112 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHH---HHHHTTCCEEES
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHH---HHHhhcCCEEEe
Confidence 46999999999999999999885 899999999988776653 4444333322 2222221111 122334677766
Q ss_pred -EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHh
Q 010845 138 -SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 138 -~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (499)
.+|+.++.+.+.|.+....++ +..++.||+||+|||+.|..|++||.+ +.++++.+.+++.++++.+.+
T Consensus 113 ~~~v~~i~~~~~~v~v~~~~~g------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~--- 183 (480)
T 3cgb_A 113 RHEVTKVDTEKKIVYAEHTKTK------DVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET--- 183 (480)
T ss_dssp SEEEEEEETTTTEEEEEETTTC------CEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS---
T ss_pred CCEEEEEECCCCEEEEEEcCCC------ceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh---
Confidence 799999999998887652222 123799999999999999999999985 456778888888887765420
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHH
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQL 294 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l 294 (499)
...++|+|||||++|+|+|..+.+.+ .+|+++++. .+++.+++++.+.+.+.+
T Consensus 184 ------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 237 (480)
T 3cgb_A 184 ------------NKVEDVTIIGGGAIGLEMAETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEA 237 (480)
T ss_dssp ------------SCCCEEEEECCHHHHHHHHHHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHH
T ss_pred ------------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHH
Confidence 13359999999999999999999877 899999987 688889999999999999
Q ss_pred HhCCCEEEeC-ceEEEeCCe----EEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEE
Q 010845 295 SKSGVRLVRG-IVKDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~~~~----v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa 368 (499)
++.||+++.+ +|.+++.+. +.+ ++.++++|.||+|+|.+|+ ++++.++++++++|+|.||+++|| +.|+|||
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~IyA 315 (480)
T 3cgb_A 238 DKHHIEILTNENVKAFKGNERVEAVET-DKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYA 315 (480)
T ss_dssp HHTTCEEECSCCEEEEEESSBEEEEEE-TTEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBC-SSTTEEE
T ss_pred HHcCcEEEcCCEEEEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccC-CCCCEEE
Confidence 9999999998 899887542 344 4568999999999999998 588888999988999999999999 8999999
Q ss_pred eccccccccCC-CCCCCCchHHHHHHHHHHHHHHHH
Q 010845 369 VGDCSGYLEST-GKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 369 ~GD~a~~~~~~-g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|||+..+... |....+++++.|.+||+++|+||.
T Consensus 316 ~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 316 AGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp CGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred eeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 99999765432 333346789999999999999985
No 20
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=7.6e-39 Score=329.40 Aligned_cols=298 Identities=21% Similarity=0.325 Sum_probs=235.2
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCC---CCCccccchhhhccccccCCCeEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL---EFRSVAEPIARIQPAISREPGSYFF 136 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (499)
++|||||||+||+++|..|++. |++|+|||+++...|.+. ++....+.. .+..+...+... +. ..++.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~-~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEE---LS-NLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHH---HH-HTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHH---HH-HcCCEEE
Confidence 4799999999999999999987 999999999987766653 232333332 233332222222 22 2467774
Q ss_pred E-EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHH
Q 010845 137 L-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (499)
Q Consensus 137 ~-~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (499)
. .+|..++.+.+.+.+.+..++ +..++.||+||+|||+.|..|++||.+ +.+++++++.++..+.+..
T Consensus 77 ~~~~v~~i~~~~~~v~v~~~~~g------~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---- 146 (452)
T 2cdu_A 77 MRHQVTNVDPETKTIKVKDLITN------EEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA---- 146 (452)
T ss_dssp ESEEEEEEEGGGTEEEEEETTTC------CEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG----
T ss_pred eCCEEEEEEcCCCEEEEEecCCC------ceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh----
Confidence 4 579999998898888652211 125799999999999999999999985 4677788888887776542
Q ss_pred hhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHH
Q 010845 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATT 292 (499)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~ 292 (499)
...++++|||+|++|+|+|..+.+.+ .+|+++++. ++++ .+++++.+.+.+
T Consensus 147 -------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 199 (452)
T 2cdu_A 147 -------------PKAKTITIIGSGYIGAELAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAK 199 (452)
T ss_dssp -------------GGCSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred -------------ccCCeEEEECcCHHHHHHHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHH
Confidence 23459999999999999999998876 899999987 6787 799999999999
Q ss_pred HHHhCCCEEEeC-ceEEEeC--CeE--EECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCe
Q 010845 293 QLSKSGVRLVRG-IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366 (499)
Q Consensus 293 ~l~~~gV~v~~~-~v~~v~~--~~v--~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~I 366 (499)
.+++.||+++++ +|.+++. +.+ ...+|+++++|.||+|+|.+|+ .+++.. ++++++|+|.||+++|| +.|||
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t-~~~~I 277 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHS-SNRDI 277 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBC-SSTTE
T ss_pred HHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCc-CCCCE
Confidence 999999999999 8999875 333 2347889999999999999999 566666 88888899999999999 99999
Q ss_pred EEeccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 367 FAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 367 fa~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
||+|||+..+.. .|....+++++.|.+||+++|+||.
T Consensus 278 yA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 278 FAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp EECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred EEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 999999976432 2222346789999999999999985
No 21
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=4.3e-39 Score=328.71 Aligned_cols=293 Identities=24% Similarity=0.349 Sum_probs=231.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCCCcccc-c-chhhhhccCCCCCccccchhhhccccccCCCeEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-P-LLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (499)
+++|||||||+||+++|..|++.|+ +|+|||+++.+.|. + +...+..+......+.....+. + ...++.++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~~gv~~~~ 79 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDA---Y-AAQNIQLLG 79 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHH---H-HHTTEEEEC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHH---H-HhCCCEEEe
Confidence 4799999999999999999999988 79999999877665 2 2222333333333222222222 2 225788776
Q ss_pred E-EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-cc---CccCCCHHHHHHHHHHHHH
Q 010845 138 S-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-EN---ATFLREVHHAQEIRRKLLL 212 (499)
Q Consensus 138 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~---~~~~~~~~~~~~~~~~~~~ 212 (499)
+ +|+.++.+.+.|.+.+ + .++.||+||+|||+.|+.|++||.+ +. ++.+.+.+++..+++.+
T Consensus 80 ~~~v~~i~~~~~~v~~~~---g--------~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l-- 146 (431)
T 1q1r_A 80 GTQVTAINRDRQQVILSD---G--------RALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL-- 146 (431)
T ss_dssp SCCEEEEETTTTEEEETT---S--------CEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC--
T ss_pred CCEEEEEECCCCEEEECC---C--------CEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh--
Confidence 4 7899999888887754 2 3799999999999999999999975 33 66678888887765542
Q ss_pred HHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC-CCHHHHHHH
Q 010845 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYA 290 (499)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~-~~~~~~~~~ 290 (499)
...++|+|||||++|+|+|..|.+.+ .+|+++++. .+++. +++++.+.+
T Consensus 147 ---------------~~~~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (431)
T 1q1r_A 147 ---------------IADNRLVVIGGGYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAFY 197 (431)
T ss_dssp ---------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHH
T ss_pred ---------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHHH
Confidence 12359999999999999999999887 899999987 67764 899999999
Q ss_pred HHHHHhCCCEEEeC-ceEEEeC----C---eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCC
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDS----Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVP 361 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~----~---~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~ 361 (499)
.+.+++.||+++++ +|.+++. + .|.+++|+++++|.||+|+|.+|+ ++++.++++.+ +| |.||+++||
T Consensus 198 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t- 274 (431)
T 1q1r_A 198 EHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQT- 274 (431)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EECCTTSBC-
T ss_pred HHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CC-EEECCCccc-
Confidence 99999999999999 8999874 2 477889999999999999999999 68888898876 45 999999999
Q ss_pred CCCCeEEeccccccccCC-CCCCCCchHHHHHHHHHHHHHHHH
Q 010845 362 SVQDVFAVGDCSGYLEST-GKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 362 ~~~~Ifa~GD~a~~~~~~-g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+.|+|||+|||+..+.+. |......+++.|.+||+.+|+||.
T Consensus 275 s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 275 SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 999999999999865321 222223578999999999999985
No 22
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=5.5e-38 Score=322.51 Aligned_cols=299 Identities=24% Similarity=0.344 Sum_probs=234.3
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCC-CCCccccchhhhccccccCCCeEE-EE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYF-FL 137 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~ 137 (499)
++|||||||+||+++|..|++. |++|+|||+++.+.|.+. ++....+.. ....+.....+. +.. .++.+ ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEK---MES-RGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHH---HHH-TTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHH---HHH-CCCEEEEC
Confidence 4799999999999999999986 899999999988777653 333333432 233333222222 222 46776 45
Q ss_pred EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhh
Q 010845 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
.+|+.++.+.+.|.+.+..++ +..++.||+||||||+.|..|++||.+ ++++++++..++..+++.+.
T Consensus 77 ~~v~~i~~~~~~v~~~~~~~g------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~----- 145 (447)
T 1nhp_A 77 TEITAIQPKEHQVTVKDLVSG------EERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV----- 145 (447)
T ss_dssp EEEEEEETTTTEEEEEETTTC------CEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHT-----
T ss_pred CEEEEEeCCCCEEEEEecCCC------ceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhh-----
Confidence 789999999999888652222 123589999999999999999999985 45777788888877765531
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCC-CCCHHHHHHHHHHH
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQL 294 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~~l 294 (499)
....++++|||+|++|+|+|..+++.+ .+|+++++. .+++ .+++++.+.+.+.+
T Consensus 146 ----------~~~~~~vvIiG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 201 (447)
T 1nhp_A 146 ----------DPEVNNVVVIGSGYIGIEAAEAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEM 201 (447)
T ss_dssp ----------CTTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHH
Confidence 012359999999999999999999877 899999987 6777 68999999999999
Q ss_pred HhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCeEE
Q 010845 295 SKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa 368 (499)
++.||+++++ +|.+++.+ .+.+ +++++++|.||+|+|.+|+ ++++.. ++++++|+|.||+++|| +.|+|||
T Consensus 202 ~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t-~~~~Iya 278 (447)
T 1nhp_A 202 EANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRT-SEPDVFA 278 (447)
T ss_dssp HTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-SSTTEEE
T ss_pred HhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccC-CCCCEEE
Confidence 9999999998 89999764 2444 5678999999999999999 566666 77788899999999999 9999999
Q ss_pred eccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 369 VGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 369 ~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|||+..+.. .|....+++++.|.+||+++|+||.
T Consensus 279 ~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 279 VGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp CGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred eeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 9999975432 1222346789999999999999975
No 23
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=3.3e-38 Score=317.81 Aligned_cols=287 Identities=20% Similarity=0.329 Sum_probs=228.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCC--CeEEEEcCCCCcccc-cchhhhhccCCCCCcccc-chhhhccccccCCCeEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAE-PIARIQPAISREPGSYFFL 137 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g--~~V~lie~~~~~~~~-~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 137 (499)
+++|+|||||+||+++|..|++.| .+|+|||+++...|. +.+.....+......+.. .+.. +....++.++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGA----MAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHH----HHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHH----HHHhCCcEEEe
Confidence 478999999999999999999988 569999998765554 444433322222222211 1122 22235677774
Q ss_pred -EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHh
Q 010845 138 -SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 138 -~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (499)
.+|+.++.+.+.|.+.+ .++.||+||+|||+.|..|++||.+ +.+++.+++.+...++..+
T Consensus 80 ~~~v~~i~~~~~~v~~~~------------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~----- 142 (384)
T 2v3a_A 80 HTRVTGIDPGHQRIWIGE------------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA----- 142 (384)
T ss_dssp SCCCCEEEGGGTEEEETT------------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH-----
T ss_pred CCEEEEEECCCCEEEECC------------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh-----
Confidence 57899998888887643 3799999999999999999999975 5678888988887776554
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC-CCHHHHHHHHHH
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQ 293 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~-~~~~~~~~~~~~ 293 (499)
...++++|||+|++|+|+|..+.+.+ .+|+++++. .+++. +++++.+.+.+.
T Consensus 143 ------------~~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 196 (384)
T 2v3a_A 143 ------------AGKRRVLLLGAGLIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAG 196 (384)
T ss_dssp ------------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHH
T ss_pred ------------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHH
Confidence 12359999999999999999999887 899999987 67776 488999999999
Q ss_pred HHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCCCCCCCCCCeE
Q 010845 294 LSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVF 367 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~l~~~~~~~If 367 (499)
+++.||+++.+ +|.+++.+ .+++++|+++++|.||+|+|.+|+. +++.++++.+ +| |.||+++|| +.|+||
T Consensus 197 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~t-~~~~Iy 273 (384)
T 2v3a_A 197 LEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN-RG-IVVDRSLRT-SHANIY 273 (384)
T ss_dssp HHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBS-SS-EEECTTCBC-SSTTEE
T ss_pred HHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCC-CC-EEECCCCCC-CCCCEE
Confidence 99999999999 89888642 5777889999999999999999994 8888899887 57 999999998 999999
Q ss_pred EeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 368 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 368 a~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|+|||+.... . ..+.+..|.+||+.+|+||.
T Consensus 274 A~GD~~~~~~----~-~~~~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 274 ALGDCAEVDG----L-NLLYVMPLMACARALAQTLA 304 (384)
T ss_dssp ECGGGEEETT----B-CCCSHHHHHHHHHHHHHHHT
T ss_pred EeeeeeeECC----C-CcchHHHHHHHHHHHHHHhc
Confidence 9999996421 1 13457789999999999985
No 24
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.2e-38 Score=325.79 Aligned_cols=295 Identities=20% Similarity=0.305 Sum_probs=222.0
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccccc-hhhhhccCC-CCCccccchhhhccccccCCCeEEE-E
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYFF-L 137 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~ 137 (499)
++|||||||+||+++|..|++. |++|+|||+++.+.|.+. +.....+.. ....+....... +.+ .++.++ .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEE---LRR-QKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHH---HHH-TTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHH---HHH-CCCEEEEC
Confidence 5899999999999999999987 899999999998887653 233333322 222222222222 122 466664 5
Q ss_pred EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhh
Q 010845 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
.+|+.+|.+.+.+.+.... + ..++.||+||||||+.|..|++||.+ +.++..+++.++..+....
T Consensus 79 ~~V~~id~~~~~v~v~~~~-~-------~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------ 144 (452)
T 3oc4_A 79 REVVAMDVENQLIAWTRKE-E-------QQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL------ 144 (452)
T ss_dssp CEEEEEETTTTEEEEEETT-E-------EEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH------
T ss_pred CEEEEEECCCCEEEEEecC-c-------eEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------
Confidence 7999999999998875211 1 35899999999999999999999985 4455555555554433322
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC-CCHHHHHHHHHHH
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~-~~~~~~~~~~~~l 294 (499)
...++++|||+|++|+|+|..+.+++ .+|+++++. ++++. +++++.+.+.+.+
T Consensus 145 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l 199 (452)
T 3oc4_A 145 -----------ENSQTVAVIGAGPIGMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSL 199 (452)
T ss_dssp -----------HTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHH
T ss_pred -----------hcCCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHH
Confidence 22359999999999999999999887 899999987 67875 8999999999999
Q ss_pred HhCCCEEEeC-ceEEEe--CCe--EEECCCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCCCCCCCCCCeEE
Q 010845 295 SKSGVRLVRG-IVKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~--~~~--v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa 368 (499)
++.||+++++ +|++++ ++. |.++++ ++++|.||+|+|++|+. +++. .++++++|+|.||+++|| +.|+|||
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~-~~~~~~~g~i~vd~~~~t-~~~~IyA 276 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDK-KIQRNLDQTIAVDAYLQT-SVPNVFA 276 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCT-TSCBCTTSCBCCCTTCBC-SSTTEEE
T ss_pred HHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHh-hhccCCCCCEEECcCccC-CCCCEEE
Confidence 9999999999 899997 333 566666 89999999999999994 5544 377888999999999999 9999999
Q ss_pred eccccccccC-CCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 369 VGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 369 ~GD~a~~~~~-~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|||+..+.. .|....+++++.|..||+.+|+||.
T Consensus 277 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 277 IGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp CGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred EEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 9999975421 2223346789999999999999875
No 25
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.7e-38 Score=328.00 Aligned_cols=320 Identities=17% Similarity=0.249 Sum_probs=234.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCcccc-cch-hhhhccCCC-------------CC-cc-ccchh
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFT-PLL-ASTCVGTLE-------------FR-SV-AEPIA 121 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~~~~-~~~-~~~~~g~~~-------------~~-~~-~~~~~ 121 (499)
.+++|||||||+||++||..|++. +.+|+|||+++++.|. |.+ ..+..+... .. .+ ..+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 357899999999999999998765 8899999999887765 222 111111100 00 00 00000
Q ss_pred hhc--cccc--cCCCeEEEEE-EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCc-----c
Q 010845 122 RIQ--PAIS--REPGSYFFLS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-----K 191 (499)
Q Consensus 122 ~~~--~~~~--~~~~~~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~-----~ 191 (499)
.+. ..+. ...++.++.+ +|+.||.+.+.|.+.+ + .++.||+||||||++|+.++++|. .
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~---g--------~~i~yd~lviATGs~p~~~~~~~~~~~~~~ 158 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLND---G--------SQITYEKCLIATGGTPRSLSAIDRAGAEVK 158 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETT---S--------CEEEEEEEEECCCEEECCCHHHHTSCHHHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECC---C--------CEEECCEEEECCCCCCCCCCCccccccccc
Confidence 000 0010 1357888875 9999999989888754 2 379999999999999987766552 2
Q ss_pred ccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEE
Q 010845 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vt 271 (499)
+.++.+++.+++..++..+ ...++|+|||||++|+|+|..|++.+.+ .+.+|+
T Consensus 159 ~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~ 211 (493)
T 1m6i_A 159 SRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEVI 211 (493)
T ss_dssp HTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEE
T ss_pred CceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEE
Confidence 3566788888888776654 2346999999999999999999886521 027899
Q ss_pred EEeCC-CcC-CCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCcEEeeeEEEEcCCCCcc-hhcccCC
Q 010845 272 LIEAN-EIL-SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLD 343 (499)
Q Consensus 272 lv~~~-~~l-~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~ 343 (499)
++++. ..+ ..+++.+.+.+.+.+++.||+++++ +|.+++. + .|++++|++++||.||+|+|.+|+ .+++.++
T Consensus 212 ~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 212 QLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp EECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHT
T ss_pred EEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcC
Confidence 99876 344 4578899999999999999999999 8998864 2 477889999999999999999999 4778889
Q ss_pred CCCCC-CCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCcCCCC
Q 010845 344 LPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG 422 (499)
Q Consensus 344 l~~~~-~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~ 422 (499)
+++++ +|+|.||++||+ .|||||+|||+..+...-+.....+++.|..||+.+|+||... . .++..
T Consensus 292 l~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~------~----~~~~~- 358 (493)
T 1m6i_A 292 LEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA------A----KPYWH- 358 (493)
T ss_dssp CCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSC------C----CCCCC-
T ss_pred CccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCC------C----CCcCC-
Confidence 98875 688999999998 5999999999986543211223557889999999999998521 1 12232
Q ss_pred CCceecccc
Q 010845 423 DPFVYRHLG 431 (499)
Q Consensus 423 ~~~~~~~~g 431 (499)
.|+.+.++|
T Consensus 359 ~~~~~s~~~ 367 (493)
T 1m6i_A 359 QSMFWSDLG 367 (493)
T ss_dssp CCEEEEESS
T ss_pred cCceeeeec
Confidence 677777665
No 26
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=7e-37 Score=317.53 Aligned_cols=289 Identities=23% Similarity=0.331 Sum_probs=213.8
Q ss_pred CCcEEEECCchHHHHHHHhccC-CCCeEEEEcC--------CCCcccccc----hhh-----------hh-----ccC--
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPL----LAS-----------TC-----VGT-- 110 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~--------~~~~~~~~~----~~~-----------~~-----~g~-- 110 (499)
+++|+|||||+||+++|..|++ .|++|+|||+ ++.+..... .+. .. .|.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4799999999999999999999 9999999992 333221100 000 00 000
Q ss_pred ------CCCCccccchhhh--------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEE
Q 010845 111 ------LEFRSVAEPIARI--------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176 (499)
Q Consensus 111 ------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LVi 176 (499)
.+...+....+.+ ...+....+++++.++++.++. +.|.+....+. ..+....+.||+|||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~---~~~~~~~~~~d~lVi 161 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETADP---KSAVKERLQADHILL 161 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSST---TSCEEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCCc---cCCCCeEEEcCEEEE
Confidence 0000010000100 0112222289999998888864 67777521110 000024799999999
Q ss_pred cCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHH---H
Q 010845 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF---I 253 (499)
Q Consensus 177 AtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~---~ 253 (499)
|||+.|..|++||. ++.+ +..+. +..... .++++|||||++|+|+|..|.++ +
T Consensus 162 ATGs~p~~p~i~G~-~~~~---~~~~~----------~~~~~~----------~~~vvViGgG~ig~E~A~~l~~~~~~g 217 (495)
T 2wpf_A 162 ATGSWPQMPAIPGI-EHCI---SSNEA----------FYLPEP----------PRRVLTVGGGFISVEFAGIFNAYKPPG 217 (495)
T ss_dssp CCCEEECCCCCTTG-GGCE---EHHHH----------TTCSSC----------CSEEEEECSSHHHHHHHHHHHHHCCTT
T ss_pred eCCCCcCCCCCCCc-cccc---cHHHH----------Hhhhhc----------CCeEEEECCCHHHHHHHHHHHhhCCCC
Confidence 99999999999997 3322 22221 111122 35999999999999999999887 6
Q ss_pred HHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeE
Q 010845 254 MRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGL 326 (499)
Q Consensus 254 ~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~ 326 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .|++++|+++++|.
T Consensus 218 --------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~ 283 (495)
T 2wpf_A 218 --------------GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDV 283 (495)
T ss_dssp --------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred --------------CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCE
Confidence 899999997 7889999999999999999999999999 89998643 47788899999999
Q ss_pred EEEcCCCCcch--h-cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 327 LVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 327 vi~a~G~~p~~--~-~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
||+|+|++|+. + ++.++++++++|+|.||+++|| +.|||||+|||+. . +++++.|.+||+++|.||.
T Consensus 284 vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~------~---~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 284 VMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD------R---LMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp EEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC------S---CCCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC------C---ccCHHHHHHHHHHHHHHhc
Confidence 99999999994 3 5778999998999999999999 9999999999994 1 6789999999999999986
No 27
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=3.4e-37 Score=322.26 Aligned_cols=312 Identities=19% Similarity=0.226 Sum_probs=230.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hhhh--------------------hccCCC----
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAST--------------------CVGTLE---- 112 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~~--------------------~~g~~~---- 112 (499)
.+++|||||||+||+++|.+|++.|++|+|||+++.+..... .+.. ......
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 457999999999999999999999999999999875432210 0000 000000
Q ss_pred CCccccchhhhcc---ccc-----cCCCeEEE-EEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCcc
Q 010845 113 FRSVAEPIARIQP---AIS-----REPGSYFF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS 183 (499)
Q Consensus 113 ~~~~~~~~~~~~~---~~~-----~~~~~~~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~ 183 (499)
.+.+...+..... .+. ...++.++ .+++..++. +.+.+. + ..+.||+||+|||+.|.
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~----g--------~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA----G--------KVFKAKNLILAVGAGPG 187 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET----T--------EEEEBSCEEECCCEECC
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC----C--------EEEEeCEEEECCCCCCC
Confidence 0111111111111 111 34567777 778888875 566553 1 37899999999999999
Q ss_pred CCCCCCcccc-CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcC
Q 010845 184 TFGIHGVKEN-ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 262 (499)
Q Consensus 184 ~~~ipG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~ 262 (499)
.|++||.+.. ++ +..+.. . .....| .++++|||||++|+|+|..+.+.+
T Consensus 188 ~p~i~G~~~~~v~---~~~~~~---~------~l~~~~---------g~~vvViGgG~~g~E~A~~l~~~G--------- 237 (523)
T 1mo9_A 188 TLDVPGVNAKGVF---DHATLV---E------ELDYEP---------GSTVVVVGGSKTAVEYGCFFNATG--------- 237 (523)
T ss_dssp CCCSTTTTSBTEE---EHHHHH---H------HCCSCC---------CSEEEEECCSHHHHHHHHHHHHTT---------
T ss_pred CCCCCCcccCcEe---eHHHHH---H------HHHhcC---------CCeEEEECCCHHHHHHHHHHHHcC---------
Confidence 9999997542 22 222222 0 111222 159999999999999999999887
Q ss_pred CCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce------EEECCCc-EEeeeEEEEcC
Q 010845 263 HVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK------LILNDGT-EVPYGLLVWST 331 (499)
Q Consensus 263 ~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~------v~~~~g~-~i~~D~vi~a~ 331 (499)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|.+++. ++ |.+++|+ ++++|.||+|+
T Consensus 238 -----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~ 312 (523)
T 1mo9_A 238 -----RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGL 312 (523)
T ss_dssp -----CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECC
T ss_pred -----CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECc
Confidence 899999987 7889999999999999999999999999 8999864 33 5667887 89999999999
Q ss_pred CCCcch--hcccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 010845 332 GVGPST--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 409 (499)
Q Consensus 332 G~~p~~--~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~ 409 (499)
|.+|+. +++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+++|.||...
T Consensus 313 G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~---- 378 (523)
T 1mo9_A 313 GEQPRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG---------PMEMFKARKSGCYAARNVMGE---- 378 (523)
T ss_dssp CCEECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS---------SCSHHHHHHHHHHHHHHHTTC----
T ss_pred CCccCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCC---------cccHHHHHHHHHHHHHHHcCC----
Confidence 999995 68888999998999999999999 99999999999952 578899999999999998531
Q ss_pred CCCCCCcCcCCCCCCceecccceEEEecCCc
Q 010845 410 GGRANSAKDMELGDPFVYRHLGSMATIGRYK 440 (499)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~g~~~~lG~~~ 440 (499)
... -.... .|+......+++++|...
T Consensus 379 -~~~---~~~~~-~p~~~~~~~~~a~vG~~e 404 (523)
T 1mo9_A 379 -KIS---YTPKN-YPDFLHTHYEVSFLGMGE 404 (523)
T ss_dssp -CCC---CCCCS-CCEEEESSSEEEEEECCH
T ss_pred -CCC---CCCCC-CCeEEECCCceEEEeCCH
Confidence 110 01122 566665666889988643
No 28
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=7.7e-37 Score=300.10 Aligned_cols=288 Identities=21% Similarity=0.264 Sum_probs=208.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCcc-ccchhhhccccccCCCeEEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-AEPIARIQPAISREPGSYFFLSHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v 140 (499)
+++|+|||||+||+++|..|++.|++|+|||++ .................... ...+...........++.++.++|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 92 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIV 92 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 479999999999999999999999999999997 21111100000000111100 011111111122234666766899
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccc---cCccCCCHHHHHHHHHHHHHHHhhc
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
++++.+.+.+.+...+ ..++.||+||+|||+.|..|.+||.+. .........+.
T Consensus 93 ~~i~~~~~~~~v~~~~---------g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~-------------- 149 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKR---------KGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADA-------------- 149 (323)
T ss_dssp EEEEEC--CEEEEESS---------SCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHG--------------
T ss_pred EEEEecCCEEEEEECC---------CCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCH--------------
Confidence 9999887665555421 137999999999999999999999754 22222111110
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHh
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~ 296 (499)
.....++|+|||+|++|+|+|..|.+.+ .+|+++++. .+++ ++. .+.+.+++
T Consensus 150 --------~~~~~~~v~vvG~G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~--~~~---~~~~~~~~ 202 (323)
T 3f8d_A 150 --------PLFKNRVVAVIGGGDSALEGAEILSSYS--------------TKVYLIHRRDTFKA--QPI---YVETVKKK 202 (323)
T ss_dssp --------GGGTTCEEEEECCSHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS--CHH---HHHHHHTC
T ss_pred --------hHcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc--CHH---HHHHHHhC
Confidence 0123359999999999999999999876 899999987 4444 232 23333445
Q ss_pred CCCEEEeC-ceEEEeCC----eEEECC---Cc--EEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCC
Q 010845 297 SGVRLVRG-IVKDVDSQ----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQD 365 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~ 365 (499)
.||+++.+ .|.+++.+ .|++.+ |+ ++++|.||+|+|++|+ ++++.++++.+++|+|.||+++|| +.||
T Consensus 203 ~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t-~~~~ 281 (323)
T 3f8d_A 203 PNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRT-SVPG 281 (323)
T ss_dssp TTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBC-SSTT
T ss_pred CCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCcee-cCCC
Confidence 69999999 79999765 477765 76 7999999999999999 788889999999999999999999 9999
Q ss_pred eEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 010845 366 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 408 (499)
Q Consensus 366 Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~ 408 (499)
|||+|||+..+ ..++++..|..||+.+|.||...+..
T Consensus 282 vya~GD~~~~~------~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 282 VFAAGDCTSAW------LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp EEECSTTBSTT------TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcceecCCC------CcccceeehhhHHHHHHHHHHHHHHH
Confidence 99999999632 24788999999999999999998873
No 29
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.8e-37 Score=315.40 Aligned_cols=315 Identities=20% Similarity=0.282 Sum_probs=227.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhc---------------------cCCCCCccccc-
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV---------------------GTLEFRSVAEP- 119 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~---------------------g~~~~~~~~~~- 119 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+........... ...+...+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 47999999999999999999999999999998876543311110000 00111111100
Q ss_pred -----hh--hhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccc
Q 010845 120 -----IA--RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE 192 (499)
Q Consensus 120 -----~~--~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~ 192 (499)
+. .....+....++.++.+++..++.+...|...+ + +..++.||+||+|||+.|..|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~---g------~~~~~~~d~lviAtG~~p~~p~i~G~~- 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDE---G------KEIEAETRYMIIASGAETAKLRLPGVE- 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETT---S------CEEEEEEEEEEECCCEEECCCCCTTGG-
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCC---C------cEEEEecCEEEECCCCCccCCCCCCcc-
Confidence 11 111223345789999999999987644443322 1 112399999999999999999999985
Q ss_pred cCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEE
Q 010845 193 NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 272 (499)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtl 272 (499)
. +.+..+...++.. .. ...++++|||||++|+|+|..+.+++ .+|++
T Consensus 154 ~---~~t~~~~~~~~~~------l~----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtl 200 (466)
T 3l8k_A 154 Y---CLTSDDIFGYKTS------FR----------KLPQDMVIIGAGYIGLEIASIFRLMG--------------VQTHI 200 (466)
T ss_dssp G---SBCHHHHHSTTCS------CC----------SCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEE
T ss_pred c---eEeHHHHHHHHHH------Hh----------hCCCeEEEECCCHHHHHHHHHHHHcC--------------CEEEE
Confidence 2 3344443321111 11 12359999999999999999999887 89999
Q ss_pred EeCC-CcCCCC-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC---Ce--EEEC--CCc--EEeeeEEEEcCCCCcchh--
Q 010845 273 IEAN-EILSSF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS---QK--LILN--DGT--EVPYGLLVWSTGVGPSTL-- 338 (499)
Q Consensus 273 v~~~-~~l~~~-~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~---~~--v~~~--~g~--~i~~D~vi~a~G~~p~~~-- 338 (499)
+++. ++++.+ ++++.+.+.+.++ |+++++ +|.+++. +. +.++ +|+ ++++|.||+|+|++|+..
T Consensus 201 v~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~ 277 (466)
T 3l8k_A 201 IEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEG 277 (466)
T ss_dssp ECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTT
T ss_pred EEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccc
Confidence 9986 788888 9999999988887 999998 8888876 33 5666 565 899999999999999954
Q ss_pred cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCc
Q 010845 339 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKD 418 (499)
Q Consensus 339 ~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~ 418 (499)
++.++++++++| |.||+++|| +.|||||+|||+.. |+++..|..||+.+|.||..... .. ...+
T Consensus 278 l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~----~~-~~~~ 341 (466)
T 3l8k_A 278 AREIGLSISKTG-IVVDETMKT-NIPNVFATGDANGL---------APYYHAAVRMSIAAANNIMANGM----PV-DYVD 341 (466)
T ss_dssp TGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS---------CCSHHHHHHHHHHHHHHHHTTTS----CC-CCCC
T ss_pred hhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCCC---------CccHhHHHHHHHHHHHHHhCCCC----Cc-cccC
Confidence 678899999999 999999999 99999999999952 78899999999999999863200 00 0011
Q ss_pred CCCCCCceecccceEEEecCC
Q 010845 419 MELGDPFVYRHLGSMATIGRY 439 (499)
Q Consensus 419 ~~~~~~~~~~~~g~~~~lG~~ 439 (499)
.. ..|+..-...+++++|..
T Consensus 342 ~~-~~p~~~~~~~~~a~vG~t 361 (466)
T 3l8k_A 342 VK-SIPVTIYTIPSLSYVGIL 361 (466)
T ss_dssp ST-TSCEEECSSSCEEEEECC
T ss_pred CC-CCcEEEECCCCeEEecCC
Confidence 12 256665555677787754
No 30
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.5e-37 Score=299.00 Aligned_cols=280 Identities=16% Similarity=0.171 Sum_probs=210.3
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc-hhhhhc-cCCCCCccccchhhhccccccCCCeEEEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL-LASTCV-GTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (499)
++|+|||||+||+++|..|++.|++|+|||+++.....+. ...+.. ......++...+.+ .+....++.++.++|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARR---QIERYPTIHWVEGRV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHH---HHTTCTTEEEEESCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHH---HHHhcCCeEEEEeEE
Confidence 6899999999999999999999999999998764322211 111111 01111122222222 234445788888999
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc---CccCCCHHHHHHHHHHHHHHHhhc
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
+.++.+.+.+.+...+ + .++.||+||+|||+.|..|.+||.+.. ........+.
T Consensus 80 ~~i~~~~~~~~v~~~~-g--------~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------- 136 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDG-G--------RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHG-------------- 136 (297)
T ss_dssp EEEEEETTEEEEEETT-S--------CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHT--------------
T ss_pred EEEEEcCCeEEEEECC-C--------CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcc--------------
Confidence 9999887665554411 1 379999999999999999999998542 1111111110
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhC
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKS 297 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~ 297 (499)
...+.++|+|||+|++|+|+|..|.+. .+|+++++... .+ .+.+.+.|++.
T Consensus 137 --------~~~~~~~v~vvG~G~~~~e~a~~l~~~---------------g~v~~v~~~~~--~~----~~~~~~~l~~~ 187 (297)
T 3fbs_A 137 --------YELDQGKIGVIAASPMAIHHALMLPDW---------------GETTFFTNGIV--EP----DADQHALLAAR 187 (297)
T ss_dssp --------GGGTTCEEEEECCSTTHHHHHHHGGGT---------------SEEEEECTTTC--CC----CHHHHHHHHHT
T ss_pred --------hhhcCCEEEEEecCccHHHHHHHhhhc---------------CcEEEEECCCC--CC----CHHHHHHHHHC
Confidence 012246999999999999999988753 28999988632 22 34566788899
Q ss_pred CCEEEeCceEEEeCC-eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCC--CCC-ceeeCCCCCCCCCCCeEEeccc
Q 010845 298 GVRLVRGIVKDVDSQ-KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS--PGG-RIGIDEWLRVPSVQDVFAVGDC 372 (499)
Q Consensus 298 gV~v~~~~v~~v~~~-~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~--~~G-~i~vd~~l~~~~~~~Ifa~GD~ 372 (499)
||+++..+|.+++.+ .+++++|+++++|.||+|+|++|+ ++++.++++.+ ++| ++.||+++++ ++|||||+|||
T Consensus 188 gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~ 266 (297)
T 3fbs_A 188 GVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDV 266 (297)
T ss_dssp TCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGG
T ss_pred CcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeec
Confidence 999996689999887 899999999999999999999998 67888888776 457 8999999998 99999999999
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 373 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 373 a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+.. |+++..|+.||+.+|.+|.+.+.
T Consensus 267 ~~~---------~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 267 ARP---------AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp GCT---------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCc---------hHHHHHHHHhHHHHHHHHHHHHh
Confidence 952 78899999999999999999886
No 31
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.7e-37 Score=317.92 Aligned_cols=313 Identities=20% Similarity=0.245 Sum_probs=224.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----------hh-----------hh-hccCCCCCccccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----------LA-----------ST-CVGTLEFRSVAEP 119 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----------~~-----------~~-~~g~~~~~~~~~~ 119 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+..... +. .. ..|. .......+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~-~~~~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGI-EMSEVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTE-EESCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCcc-ccCCCccC
Confidence 47899999999999999999999999999999876532210 00 00 0010 00000011
Q ss_pred hhhh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 120 IARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 120 ~~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+..+ ........++.++.+++..+|. +.+.+...+++ ..++.||+||+|||+.|..|
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~~~gg-------~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGK--NQVTATKADGG-------TQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEET--TEEEEECTTSC-------EEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEecCCC-------cEEEEeCEEEECCCCCCCCC
Confidence 1110 0111223578888888877765 44555431101 24799999999999999999
Q ss_pred CCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010845 186 GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (499)
Q Consensus 186 ~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~ 265 (499)
++||.+... +.+..++. ..... .++++|||||++|+|+|..|.+++
T Consensus 156 ~i~g~~~~~--v~t~~~~~----------~~~~~----------~~~vvViGgG~~g~E~A~~l~~~g------------ 201 (474)
T 1zmd_A 156 PGITIDEDT--IVSSTGAL----------SLKKV----------PEKMVVIGAGVIGVELGSVWQRLG------------ 201 (474)
T ss_dssp TTCCCCSSS--EECHHHHT----------TCSSC----------CSEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCCCcCc--EEcHHHHh----------hcccc----------CceEEEECCCHHHHHHHHHHHHcC------------
Confidence 999975421 22332221 11112 259999999999999999999887
Q ss_pred CceEEEEEeCC-CcCC-CCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e-EEE-------CCCcEEeeeEEEEcCC
Q 010845 266 DYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K-LIL-------NDGTEVPYGLLVWSTG 332 (499)
Q Consensus 266 ~~~~Vtlv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~--~-v~~-------~~g~~i~~D~vi~a~G 332 (499)
.+|+++++. ++++ .+++++.+.+.+.+++.||+++++ +|.+++.+ + +.+ .+++++++|.||+|+|
T Consensus 202 --~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 202 --ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp --CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred --CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcC
Confidence 899999987 7888 899999999999999999999999 89998743 2 443 3567899999999999
Q ss_pred CCcch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 010845 333 VGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 409 (499)
Q Consensus 333 ~~p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~ 409 (499)
.+|+. + +++++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+++|.||...
T Consensus 280 ~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~---- 345 (474)
T 1zmd_A 280 RRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAG---------PMLAHKAEDEGIICVEGMAGG---- 345 (474)
T ss_dssp EEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHTTC----
T ss_pred CCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCC---------CccHHHHHHHHHHHHHHhcCC----
Confidence 99994 4 5677898888899999999998 99999999999952 678899999999999998631
Q ss_pred CCCCCCcCcCCCCCCceecccceEEEecCC
Q 010845 410 GGRANSAKDMELGDPFVYRHLGSMATIGRY 439 (499)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~g~~~~lG~~ 439 (499)
... -+... .|+......+++++|..
T Consensus 346 -~~~---~~~~~-~p~~~~~~~~~a~vG~~ 370 (474)
T 1zmd_A 346 -AVH---IDYNC-VPSVIYTHPEVAWVGKS 370 (474)
T ss_dssp -CCC---CCGGG-CCEEECSSSEEEEEECC
T ss_pred -CCc---CCCCC-CCEEEECCCCeEEEeCC
Confidence 010 01111 44444344577777754
No 32
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.9e-36 Score=314.72 Aligned_cols=288 Identities=18% Similarity=0.247 Sum_probs=210.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC--------Ccccccc----hhh-----------h-----hccCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN--------HMVFTPL----LAS-----------T-----CVGTLE 112 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~--------~~~~~~~----~~~-----------~-----~~g~~~ 112 (499)
.+++|+|||||+||+++|..|++.|++|+|||+++ .+..... .+. . ..|...
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 45799999999999999999999999999999864 2211100 000 0 001110
Q ss_pred -------CCccccchhhh-------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcC
Q 010845 113 -------FRSVAEPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIAL 178 (499)
Q Consensus 113 -------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAt 178 (499)
...+....+.+ ........++.++.+++..++... +.+...+ + +..++.||+|||||
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~--v~v~~~~-g------~~~~i~~d~lViAT 181 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHR--IKATNNK-G------KEKIYSAERFLIAT 181 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTE--EEEECTT-C------CCCEEEEEEEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCE--EEEEcCC-C------CEEEEECCEEEEEC
Confidence 00011111110 001122367899999999888654 4443311 1 12479999999999
Q ss_pred CCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHH
Q 010845 179 GAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR 258 (499)
Q Consensus 179 G~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~ 258 (499)
|+.|..|++||.+++.+ +..+. +.....| ++++|||||++|+|+|..+++++
T Consensus 182 Gs~p~~p~i~G~~~~~~---t~~~~----------~~l~~~~----------~~vvVIGgG~ig~E~A~~l~~~G----- 233 (519)
T 3qfa_A 182 GERPRYLGIPGDKEYCI---SSDDL----------FSLPYCP----------GKTLVVGASYVALECAGFLAGIG----- 233 (519)
T ss_dssp CEEECCCCCTTHHHHCB---CHHHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT-----
T ss_pred CCCcCCCCCCCccCceE---cHHHH----------hhhhhcC----------CeEEEECCcHHHHHHHHHHHHcC-----
Confidence 99999999999754332 22221 2222333 48999999999999999999887
Q ss_pred HhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEe---C---CeEEE----CCC-c--EEee
Q 010845 259 QRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVD---S---QKLIL----NDG-T--EVPY 324 (499)
Q Consensus 259 ~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~---~---~~v~~----~~g-~--~i~~ 324 (499)
.+|+++++.++++.+++++.+.+.+.|++.||+++++ .+.+++ + +.+.+ .+| + ++++
T Consensus 234 ---------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~ 304 (519)
T 3qfa_A 234 ---------LDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEY 304 (519)
T ss_dssp ---------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEE
T ss_pred ---------CeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEEC
Confidence 8999999988899999999999999999999999998 655553 2 22322 355 2 5789
Q ss_pred eEEEEcCCCCcch-h--cccCCCCCC-CCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHH
Q 010845 325 GLLVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 400 (499)
Q Consensus 325 D~vi~a~G~~p~~-~--~~~~~l~~~-~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~ 400 (499)
|.||+|+|++|+. + ++.++++++ ++|+|.||+++|| +.|||||+|||+. + .+++++.|..||+++|+
T Consensus 305 D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~-----g---~~~~~~~A~~~g~~aa~ 375 (519)
T 3qfa_A 305 NTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILE-----D---KVELTPVAIQAGRLLAQ 375 (519)
T ss_dssp SEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBS-----S---SCCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccC-----C---CCccHHHHHHHHHHHHH
Confidence 9999999999984 3 667788888 6899999999999 9999999999993 2 27889999999999999
Q ss_pred HHH
Q 010845 401 LLN 403 (499)
Q Consensus 401 ~i~ 403 (499)
||.
T Consensus 376 ~i~ 378 (519)
T 3qfa_A 376 RLY 378 (519)
T ss_dssp HHH
T ss_pred HHc
Confidence 986
No 33
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=314.69 Aligned_cols=286 Identities=19% Similarity=0.243 Sum_probs=213.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hh-----------hhhc--cCCCCC--------c
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------STCV--GTLEFR--------S 115 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~-----------~~~~--g~~~~~--------~ 115 (499)
.+++|+|||||+||+++|..|++.|++|+|||++. +..... .+ .... ...... .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 35799999999999999999999999999999974 211100 00 0000 000000 0
Q ss_pred cccchhhh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCC
Q 010845 116 VAEPIARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE 181 (499)
Q Consensus 116 ~~~~~~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~ 181 (499)
...++..+ ........++.++.+++..++... +.+... ++ +..++.||+||+|||+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~--~~v~~~-~g------~~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGN--VEVQKR-DN------TTEVYSANHILVATGGK 159 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSC--EEEEES-SS------CCEEEEEEEEEECCCEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCE--EEEEeC-CC------cEEEEEeCEEEEcCCCC
Confidence 00111110 011112367899999888876544 444321 11 12378999999999999
Q ss_pred ccCC-CCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHh
Q 010845 182 ASTF-GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (499)
Q Consensus 182 ~~~~-~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~ 260 (499)
|..| ++||.+ ..+ +..+.. ..... .++++|||||++|+|+|..|.+++
T Consensus 160 p~~p~~i~g~~-~~~---~~~~~~----------~l~~~----------~~~vvViGgG~ig~E~A~~l~~~g------- 208 (479)
T 2hqm_A 160 AIFPENIPGFE-LGT---DSDGFF----------RLEEQ----------PKKVVVVGAGYIGIELAGVFHGLG------- 208 (479)
T ss_dssp ECCCTTSTTGG-GSB---CHHHHH----------HCSSC----------CSEEEEECSSHHHHHHHHHHHHTT-------
T ss_pred CCCCCCCCCcc-ccc---chHHHh----------ccccc----------CCeEEEECCCHHHHHHHHHHHHcC-------
Confidence 9999 899973 222 222221 11222 359999999999999999999887
Q ss_pred cCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC------eEEECCC-cEEeeeEEEEcC
Q 010845 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ------KLILNDG-TEVPYGLLVWST 331 (499)
Q Consensus 261 ~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~------~v~~~~g-~~i~~D~vi~a~ 331 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .|.+++| +++++|.||+|+
T Consensus 209 -------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~ 281 (479)
T 2hqm_A 209 -------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTI 281 (479)
T ss_dssp -------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECS
T ss_pred -------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECC
Confidence 899999997 7889999999999999999999999999 89998642 4777888 799999999999
Q ss_pred CCCcch-h-cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 332 GVGPST-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 332 G~~p~~-~-~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
|++|+. + ++.++++++++|+|.||+++|| +.|+|||+|||+. . +.+++.|.+||+.+|+||..
T Consensus 282 G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~------~---~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 282 GRKSHLGMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVG------K---VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CEEECCCSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTT------S---SCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCccccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCC------C---cccHHHHHHHHHHHHHHhcC
Confidence 999995 5 6778999999999999999998 9999999999984 2 67899999999999999863
No 34
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=2.6e-36 Score=313.09 Aligned_cols=286 Identities=21% Similarity=0.305 Sum_probs=214.0
Q ss_pred CCcEEEECCchHHHHHHHhccC-CCCeEEEEcC--------CCCcccccch----hh-----------h---h--ccC--
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPLL----AS-----------T---C--VGT-- 110 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~--------~~~~~~~~~~----~~-----------~---~--~g~-- 110 (499)
+++|+|||||+||+++|.+|++ .|++|+|||+ ++.+..+... +. . . .|.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 4799999999999999999999 9999999992 3333221100 00 0 0 000
Q ss_pred ------CCCCccccchh-------hhccccccCC-CeEEEEEEEEEEECCCCEEEEeee--cCccccCCCc-eeeeeCCe
Q 010845 111 ------LEFRSVAEPIA-------RIQPAISREP-GSYFFLSHCAGIDTDNHVVHCETV--TDELRTLEPW-KFKISYDK 173 (499)
Q Consensus 111 ------~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~v~~id~~~~~v~~~~~--~~~~~~~~~~-~~~i~yd~ 173 (499)
.+...+....+ .......... +++++.++++.++. +.+.+... .++ + ...+.||+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~g------~~~~~~~~d~ 154 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN--HTVLVRESADPNS------AVLETLDTEY 154 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET--TEEEEESSSSTTS------CEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC--CEEEEEeeccCCC------CceEEEEcCE
Confidence 00000000000 0001111234 89999999988875 46666421 011 0 14799999
Q ss_pred EEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHH-
Q 010845 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF- 252 (499)
Q Consensus 174 LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~- 252 (499)
||||||+.|..|++||. ++. .+..+.. ..... .++++|||||++|+|+|..+.++
T Consensus 155 lviAtGs~p~~p~i~g~-~~~---~~~~~~~----------~~~~~----------~~~vvViGgG~ig~E~A~~l~~~~ 210 (490)
T 1fec_A 155 ILLATGSWPQHLGIEGD-DLC---ITSNEAF----------YLDEA----------PKRALCVGGGYISIEFAGIFNAYK 210 (490)
T ss_dssp EEECCCEEECCCCSBTG-GGC---BCHHHHT----------TCSSC----------CSEEEEECSSHHHHHHHHHHHHHS
T ss_pred EEEeCCCCCCCCCCCCc-cce---ecHHHHh----------hhhhc----------CCeEEEECCCHHHHHHHHHHHhhc
Confidence 99999999999999987 332 2332221 11222 35999999999999999999887
Q ss_pred --HHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEe
Q 010845 253 --IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVP 323 (499)
Q Consensus 253 --~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~ 323 (499)
+ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .|.+++|++++
T Consensus 211 ~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 211 ARG--------------GQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp CTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred cCc--------------CeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 6 899999997 7899999999999999999999999999 89998643 46778888999
Q ss_pred eeEEEEcCCCCcch--h-cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHH
Q 010845 324 YGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 400 (499)
Q Consensus 324 ~D~vi~a~G~~p~~--~-~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~ 400 (499)
+|.||+|+|.+|+. + ++.++++++++|+|.||+++|| +.|+|||+|||+. . +++++.|.+||+.+|.
T Consensus 277 ~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~------~---~~l~~~A~~~g~~aa~ 346 (490)
T 1fec_A 277 YDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD------R---VMLTPVAINEGAAFVD 346 (490)
T ss_dssp ESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC------S---CCCHHHHHHHHHHHHH
T ss_pred cCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC------C---ccCHHHHHHHHHHHHH
Confidence 99999999999994 4 6788999998999999999999 9999999999994 1 6789999999999999
Q ss_pred HHH
Q 010845 401 LLN 403 (499)
Q Consensus 401 ~i~ 403 (499)
||.
T Consensus 347 ~i~ 349 (490)
T 1fec_A 347 TVF 349 (490)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
No 35
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.4e-36 Score=311.91 Aligned_cols=280 Identities=20% Similarity=0.292 Sum_probs=212.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hh-----------hhhc------cC------CCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------STCV------GT------LEFR 114 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~-----------~~~~------g~------~~~~ 114 (499)
++||+|||||+||+++|..|++.|++|+|||++. +..... .+ .... +. .+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 4799999999999999999999999999999974 221100 00 0000 00 0000
Q ss_pred ccccchhhh-------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCC
Q 010845 115 SVAEPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (499)
Q Consensus 115 ~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~i 187 (499)
.+....... ........+++++.++++.++. +.|.+ + + .++.||+||||||+.|..|++
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~-~---g--------~~~~~d~lviAtGs~p~~p~i 148 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV-N---G--------ETITADHILIATGGRPSHPDI 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE-T---T--------EEEEEEEEEECCCEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE-C---C--------EEEEeCEEEECCCCCCCCCCC
Confidence 000000000 0001123578888888887875 56665 2 2 379999999999999999999
Q ss_pred CCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 188 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
||.+ +. .+..+... .... .++++|||||++|+|+|..|++++
T Consensus 149 ~g~~-~~---~~~~~~~~----------~~~~----------~~~vvViGgG~~g~e~A~~l~~~g-------------- 190 (450)
T 1ges_A 149 PGVE-YG---IDSDGFFA----------LPAL----------PERVAVVGAGYIGVELGGVINGLG-------------- 190 (450)
T ss_dssp TTGG-GS---BCHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-ce---ecHHHhhh----------hhhc----------CCeEEEECCCHHHHHHHHHHHhcC--------------
Confidence 9973 32 23333221 1122 359999999999999999999887
Q ss_pred eEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeEEEEcCCCCcch--h
Q 010845 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPST--L 338 (499)
Q Consensus 268 ~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~p~~--~ 338 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+++++|+++++|.||+|+|.+|+. +
T Consensus 191 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l 270 (450)
T 1ges_A 191 AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNI 270 (450)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTS
T ss_pred CEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCC
Confidence 899999987 6889999999999999999999999999 89998742 4778889999999999999999994 3
Q ss_pred -cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 339 -VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 339 -~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
++.++++++++|+|.||+++|| +.|||||+|||+. . +++++.|.+||+.+|.||..
T Consensus 271 ~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~------~---~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 271 NLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTG------A---VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGT------S---CCCHHHHHHHHHHHHHHHHT
T ss_pred CchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCC------C---CccHHHHHHHHHHHHHHHcC
Confidence 5677899998999999999998 9999999999984 1 67889999999999999863
No 36
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4.6e-36 Score=309.10 Aligned_cols=279 Identities=21% Similarity=0.318 Sum_probs=211.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hhh-----------hh-----ccCC------CCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------TC-----VGTL------EFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~-----------~~-----~g~~------~~~~ 115 (499)
+++|+|||||+||+++|..|++.|++|+|||++. +..... .+. .. .+.. +...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 5799999999999999999999999999999974 221100 000 00 0110 0000
Q ss_pred cccchhhh-------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCC
Q 010845 116 VAEPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (499)
Q Consensus 116 ~~~~~~~~-------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ip 188 (499)
+....+.+ ........++.++.+++..++. +.|.+ + + .++.||+||||||+.|..|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~-~---g--------~~~~~d~lviAtGs~p~~p~i~ 148 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV-E---G--------QRLSADHIVIATGGRPIVPRLP 148 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE-T---T--------EEEEEEEEEECCCEEECCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE-C---C--------EEEEcCEEEECCCCCCCCCCCC
Confidence 00000000 0111123578888888877764 56666 2 2 3799999999999999999999
Q ss_pred CccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 010845 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (499)
Q Consensus 189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~ 268 (499)
|. +.. .+..+... .... .++++|||||++|+|+|..|.+++ .
T Consensus 149 G~-~~~---~~~~~~~~----------~~~~----------~~~vvVvGgG~~g~e~A~~l~~~G--------------~ 190 (463)
T 2r9z_A 149 GA-ELG---ITSDGFFA----------LQQQ----------PKRVAIIGAGYIGIELAGLLRSFG--------------S 190 (463)
T ss_dssp TG-GGS---BCHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred Cc-cce---ecHHHHhh----------hhcc----------CCEEEEECCCHHHHHHHHHHHhcC--------------C
Confidence 97 332 23332221 1122 259999999999999999999887 8
Q ss_pred EEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCc-EEeeeEEEEcCCCCcch--h-
Q 010845 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT-EVPYGLLVWSTGVGPST--L- 338 (499)
Q Consensus 269 ~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~-~i~~D~vi~a~G~~p~~--~- 338 (499)
+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.+++|+ ++++|.||+|+|.+|+. +
T Consensus 191 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~ 270 (463)
T 2r9z_A 191 EVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLG 270 (463)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSC
T ss_pred EEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCC
Confidence 99999987 7889999999999999999999999999 89998642 57778998 89999999999999994 3
Q ss_pred cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 339 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 339 ~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
++.++++++++|+|.||+++|| +.|||||+|||+. . +.+++.|.+||+.+|.||.
T Consensus 271 ~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~------~---~~~~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 271 LEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITG------R---DQLTPVAIAAGRRLAERLF 325 (463)
T ss_dssp HHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGT------S---CCCHHHHHHHHHHHHHHHH
T ss_pred chhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCC------C---cccHHHHHHHHHHHHHHHc
Confidence 4677898888999999999998 9999999999984 1 6788999999999999986
No 37
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1e-35 Score=308.48 Aligned_cols=287 Identities=20% Similarity=0.248 Sum_probs=211.2
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC-------C--cccccch----hh---------------h-hccC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN-------H--MVFTPLL----AS---------------T-CVGT 110 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~-------~--~~~~~~~----~~---------------~-~~g~ 110 (499)
..+++|+|||||+||+++|..|++.|++|+|||+.. . +...... +. . ..|.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 345899999999999999999999999999999421 1 1111000 00 0 0011
Q ss_pred CCCC-------ccccchhhhc-------cccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEE
Q 010845 111 LEFR-------SVAEPIARIQ-------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176 (499)
Q Consensus 111 ~~~~-------~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LVi 176 (499)
.... .+......+. .......++.++.+++..++.. .+.+... ++ ...+.||+|||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~--~v~v~~~-~g-------~~~~~~d~lvi 156 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSH--TLLAKLK-SG-------ERTITAQTFVI 156 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEECT-TC-------CEEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCC--EEEEEeC-CC-------eEEEEcCEEEE
Confidence 1000 0101111110 0112235788888888888754 4444331 11 14799999999
Q ss_pred cCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHH
Q 010845 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 256 (499)
Q Consensus 177 AtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~ 256 (499)
|||+.|..|++||.++..+ +..+. +.....| ++++|||+|++|+|+|..+.+++
T Consensus 157 ATGs~p~~p~i~G~~~~~~---~~~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g--- 210 (483)
T 3dgh_A 157 AVGGRPRYPDIPGAVEYGI---TSDDL----------FSLDREP----------GKTLVVGAGYIGLECAGFLKGLG--- 210 (483)
T ss_dssp CCCEEECCCSSTTHHHHCB---CHHHH----------TTCSSCC----------CEEEEECCSHHHHHHHHHHHHTT---
T ss_pred eCCCCcCCCCCCCcccccC---cHHHH----------hhhhhcC----------CcEEEECCCHHHHHHHHHHHHcC---
Confidence 9999999999999854432 22221 1222223 48999999999999999999887
Q ss_pred HHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECCCc-----EEeee
Q 010845 257 VRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGT-----EVPYG 325 (499)
Q Consensus 257 ~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~g~-----~i~~D 325 (499)
.+|+++++.++++.+++++.+.+.+.|++.||+++++ .|.+++. + .|++.+++ ++++|
T Consensus 211 -----------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D 279 (483)
T 3dgh_A 211 -----------YEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYD 279 (483)
T ss_dssp -----------CEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEES
T ss_pred -----------CEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcC
Confidence 8999999988899999999999999999999999999 8888864 2 26666553 79999
Q ss_pred EEEEcCCCCcch-hc--ccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 010845 326 LLVWSTGVGPST-LV--KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 402 (499)
Q Consensus 326 ~vi~a~G~~p~~-~~--~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i 402 (499)
.||+|+|++|+. ++ +..++++++ |+|.||+++|| +.|||||+|||+. + .|.+++.|..||+.+|+||
T Consensus 280 ~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~A~~~g~~aa~~i 349 (483)
T 3dgh_A 280 TVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY-----G---KPELTPVAVLAGRLLARRL 349 (483)
T ss_dssp EEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT-----T---SCCCHHHHHHHHHHHHHHH
T ss_pred EEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC-----C---CCccHHHHHHHHHHHHHHH
Confidence 999999999994 44 777899888 99999999998 9999999999984 2 2778999999999999998
Q ss_pred H
Q 010845 403 N 403 (499)
Q Consensus 403 ~ 403 (499)
.
T Consensus 350 ~ 350 (483)
T 3dgh_A 350 Y 350 (483)
T ss_dssp H
T ss_pred c
Confidence 6
No 38
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-36 Score=313.00 Aligned_cols=298 Identities=18% Similarity=0.220 Sum_probs=204.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccccc----chhh-----------hh-----ccCC-----CCCcc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP----LLAS-----------TC-----VGTL-----EFRSV 116 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~----~~~~-----------~~-----~g~~-----~~~~~ 116 (499)
+++|+|||||+||+++|..|++.|++|+|||+++. .... ..+. .. .|.. +...+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~-GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL-GGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSST-THHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCc-CccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 36899999999999999999999999999999852 1110 0000 00 0110 00000
Q ss_pred c-------cchhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecC--ccccCCCceeeeeCCeEEEcCCCCccCCCC
Q 010845 117 A-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTD--ELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (499)
Q Consensus 117 ~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~--~~~~~~~~~~~i~yd~LViAtG~~~~~~~i 187 (499)
. ..+...........++.++.+++..++. +.+.+.+... +.....+...++.||+||||||+.|..|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i 158 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPV 158 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEEECCCCCBCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCC
Confidence 0 0011001111123578888877766654 4555532000 000000012478999999999999999999
Q ss_pred CCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 188 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
||.+ +.+ +..++. .... .++++|||||++|+|+|..|++++
T Consensus 159 ~G~~-~~~---~~~~~~----------~~~~-----------~~~vvViGgG~ig~E~A~~l~~~g-------------- 199 (500)
T 1onf_A 159 KGIE-NTI---SSDEFF----------NIKE-----------SKKIGIVGSGYIAVELINVIKRLG-------------- 199 (500)
T ss_dssp TTGG-GCE---EHHHHT----------TCCC-----------CSEEEEECCSHHHHHHHHHHHTTT--------------
T ss_pred CCCC-ccc---CHHHHh----------ccCC-----------CCeEEEECChHHHHHHHHHHHHcC--------------
Confidence 9973 322 222211 1111 359999999999999999999877
Q ss_pred eEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcE-EeeeEEEEcCCCCcch--
Q 010845 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTE-VPYGLLVWSTGVGPST-- 337 (499)
Q Consensus 268 ~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~-i~~D~vi~a~G~~p~~-- 337 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .+.+++|++ +++|.||+|+|.+|+.
T Consensus 200 ~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~ 279 (500)
T 1onf_A 200 IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTEN 279 (500)
T ss_dssp CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTT
T ss_pred CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCC
Confidence 899999996 7889999999999999999999999999 89998742 467788888 9999999999999995
Q ss_pred h-cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccC------------------------CC-CCCCCchHHHH
Q 010845 338 L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES------------------------TG-KTVLPALAQVA 391 (499)
Q Consensus 338 ~-~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~------------------------~g-~~~~p~~~~~A 391 (499)
+ ++.+++++ ++|+|.||+++|| +.|+|||+|||+.+++. .+ ....+++++.|
T Consensus 280 l~~~~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 357 (500)
T 1onf_A 280 LKLEKLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVA 357 (500)
T ss_dssp SSCTTTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC------------------------------CBCCCCHHHH
T ss_pred CCchhcCccc-cCCEEEECCCccc-CCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHH
Confidence 4 57788888 7899999999998 99999999999954210 00 00247889999
Q ss_pred HHHHHHHHHHHH
Q 010845 392 ERQGKYLFSLLN 403 (499)
Q Consensus 392 ~~~g~~aa~~i~ 403 (499)
.+||+++|+||.
T Consensus 358 ~~~g~~aa~~i~ 369 (500)
T 1onf_A 358 INAGRLLADRLF 369 (500)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999986
No 39
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=9.5e-37 Score=315.15 Aligned_cols=288 Identities=21% Similarity=0.257 Sum_probs=212.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh----------------h-hccCCCCCccccch
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS----------------T-CVGTLEFRSVAEPI 120 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~----------------~-~~g~~~~~~~~~~~ 120 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+...... +. . ..|.........++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 468999999999999999999999999999998765332110 00 0 00100000000011
Q ss_pred hhh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 121 ARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 121 ~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
..+ ...+....++.++.+++..++.. .+.+...+ + +..++.||+||+|||+.|..|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~--~~~v~~~~-G------~~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAH--SIRVNGLD-G------KQEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETT--EEEEEETT-S------CEEEEEEEEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEEecC-C------ceEEEEcCEEEECCCCCcCCCC
Confidence 110 01112225788888888778754 44444311 1 1247999999999999999888
Q ss_pred CCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010845 187 IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (499)
Q Consensus 187 ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~ 266 (499)
++|.+.. .+.+..++.. .... .++++|||||++|+|+|..+.+.+
T Consensus 153 ~~g~~~~--~v~t~~~~~~----------~~~~----------~~~vvViGgG~~g~E~A~~l~~~g------------- 197 (468)
T 2qae_A 153 FLPFDEK--VVLSSTGALA----------LPRV----------PKTMVVIGGGVIGLELGSVWARLG------------- 197 (468)
T ss_dssp TBCCCSS--SEECHHHHHT----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT-------------
T ss_pred CCCCCcC--ceechHHHhh----------cccC----------CceEEEECCCHHHHHHHHHHHHhC-------------
Confidence 8887531 1223333321 1112 359999999999999999999887
Q ss_pred ceEEEEEeCC-CcCCCCCHHHHHHHHHHH-HhCCCEEEeC-ceEEEeCC----eEEEC--CC--cEEeeeEEEEcCCCCc
Q 010845 267 YIHVTLIEAN-EILSSFDDRLRHYATTQL-SKSGVRLVRG-IVKDVDSQ----KLILN--DG--TEVPYGLLVWSTGVGP 335 (499)
Q Consensus 267 ~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l-~~~gV~v~~~-~v~~v~~~----~v~~~--~g--~~i~~D~vi~a~G~~p 335 (499)
.+|+++++. ++++.+++++.+.+.+.+ ++.||+++++ +|.+++.+ .+.++ +| +++++|.||+|+|.+|
T Consensus 198 -~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 198 -AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp -CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred -CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 899999987 788999999999999999 9999999999 89998753 24454 66 6899999999999999
Q ss_pred ch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 336 ST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 336 ~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+. + ++.++++++++|+|.||+++|| +.|||||+|||+.. .+++++.|.+||+.+|.||.
T Consensus 277 ~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~~A~~~g~~aa~~i~ 338 (468)
T 2qae_A 277 FTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDK--------GPMLAHKAEDEGVACAEILA 338 (468)
T ss_dssp CCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSS--------SCSCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCC--------CCccHhHHHHHHHHHHHHHc
Confidence 94 4 5778898888899999999998 99999999999951 26789999999999999986
No 40
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.1e-35 Score=305.05 Aligned_cols=285 Identities=18% Similarity=0.207 Sum_probs=210.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchh---------------hhhc------cCC------CC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA---------------STCV------GTL------EF 113 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~---------------~~~~------g~~------~~ 113 (499)
.+++|+|||||+||+++|..|++.|++|+|||++. +....... .... |.. +.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 35799999999999999999999999999999983 22110000 0000 110 00
Q ss_pred Ccccc-------chh--hhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 114 RSVAE-------PIA--RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 114 ~~~~~-------~~~--~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
..+.. .++ .+...+....+++++.+++..++.. .+.+...+ + +...+.||+||||||+.|..
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~~~v~~~~-g------~~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRLNE-G------GERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETT--EEEEEETT-S------SEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCC--EEEEEeCC-C------ceEEEEeCEEEEeCCCCCCC
Confidence 00000 011 0111122222899999999888865 44443211 1 12479999999999999999
Q ss_pred CCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCC
Q 010845 185 FGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (499)
Q Consensus 185 ~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~ 264 (499)
|++||.+... +.+..+... .... .++++|||||++|+|+|..+.+.+
T Consensus 153 p~i~G~~~~~--~~~~~~~~~----------~~~~----------~~~vvViGgG~~g~E~A~~l~~~g----------- 199 (467)
T 1zk7_A 153 PPIPGLKESP--YWTSTEALA----------SDTI----------PERLAVIGSSVVALELAQAFARLG----------- 199 (467)
T ss_dssp CCCTTTTTSC--CBCHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCCcCc--eecHHHHhc----------cccc----------CCEEEEECCCHHHHHHHHHHHHcC-----------
Confidence 9999985421 223333221 1122 359999999999999999999887
Q ss_pred CCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcch-
Q 010845 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST- 337 (499)
Q Consensus 265 ~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~- 337 (499)
.+|+++++. .+++ +++++.+.+.+.+++.||+++++ +|.+++.+ .+.++ +.++++|.||+|+|.+|+.
T Consensus 200 ---~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 200 ---SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp ---CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred ---CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 899999987 6888 99999999999999999999998 89888642 24454 5689999999999999994
Q ss_pred h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 338 L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 338 ~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+ ++..+++++++|+|.||+++|+ +.|+|||+|||+.. |..++.|.+||+.+|.||.
T Consensus 275 ~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 275 SLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ---------PQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp TSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS---------CCCHHHHHHHHHHHHHHHT
T ss_pred cCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHHc
Confidence 2 5677898888899999999999 99999999999952 5678999999999999985
No 41
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=8.1e-36 Score=309.60 Aligned_cols=289 Identities=19% Similarity=0.287 Sum_probs=211.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC--------Ccccccch----hh---------------h-hccCC-
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN--------HMVFTPLL----AS---------------T-CVGTL- 111 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~--------~~~~~~~~----~~---------------~-~~g~~- 111 (499)
.++||+|||||+||+++|..|++.|++|+|||+++ .+....+. +. . ..|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 34799999999999999999999999999999732 22211000 00 0 00110
Q ss_pred ------CCCccccchhhh-------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcC
Q 010845 112 ------EFRSVAEPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIAL 178 (499)
Q Consensus 112 ------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAt 178 (499)
+...+....+.+ ........++.++.+++..++.. .+.+...+ ++..++.||+|||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~--~v~v~~~~-------g~~~~~~~d~lViAT 155 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEH--TVRGVDKG-------GKATLLSAEHIVIAT 155 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSS--EEEEECTT-------SCEEEEEEEEEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCC--eEEEEeCC-------CceEEEECCEEEEcC
Confidence 100111111110 01112235788988888877654 45544311 123589999999999
Q ss_pred CCCccCCC-CCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHH
Q 010845 179 GAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (499)
Q Consensus 179 G~~~~~~~-ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~ 257 (499)
|+.|..|+ +||.++..+ +..+. +.....| ++++|||||++|+|+|..+++++
T Consensus 156 Gs~p~~p~~i~G~~~~~~---~~~~~----------~~~~~~~----------~~vvViGgG~ig~E~A~~l~~~g---- 208 (488)
T 3dgz_A 156 GGRPRYPTQVKGALEYGI---TSDDI----------FWLKESP----------GKTLVVGASYVALECAGFLTGIG---- 208 (488)
T ss_dssp CEEECCCSSCBTHHHHCB---CHHHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT----
T ss_pred CCCCCCCCCCCCcccccC---cHHHH----------HhhhhcC----------CeEEEECCCHHHHHHHHHHHHcC----
Confidence 99999998 999855432 22221 2222233 48999999999999999999887
Q ss_pred HHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC---C--eEEECC---Cc--EEeeeE
Q 010845 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS---Q--KLILND---GT--EVPYGL 326 (499)
Q Consensus 258 ~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~---~--~v~~~~---g~--~i~~D~ 326 (499)
.+|+++++.++++.+++++.+.+.+.|++.||+++++ .+.+++. + .+.+.+ |+ ++++|.
T Consensus 209 ----------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (488)
T 3dgz_A 209 ----------LDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDT 278 (488)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESE
T ss_pred ----------CceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCE
Confidence 8999999988899999999999999999999999999 7888853 2 255543 54 579999
Q ss_pred EEEcCCCCcch-h--cccCCCCCC-CCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 010845 327 LVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 402 (499)
Q Consensus 327 vi~a~G~~p~~-~--~~~~~l~~~-~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i 402 (499)
||+|+|++|+. + ++..+++++ ++|+|.||+++|| +.|||||+|||+. + .|.+++.|..||+++|+||
T Consensus 279 vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~A~~~g~~aa~~i 349 (488)
T 3dgz_A 279 VLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAE-----G---RPELTPTAIKAGKLLAQRL 349 (488)
T ss_dssp EEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBT-----T---CCCCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecC-----C---CCcchhHHHHHHHHHHHHH
Confidence 99999999994 4 567789998 7899999999999 9999999999984 2 2778999999999999998
Q ss_pred HH
Q 010845 403 NR 404 (499)
Q Consensus 403 ~~ 404 (499)
..
T Consensus 350 ~g 351 (488)
T 3dgz_A 350 FG 351 (488)
T ss_dssp HS
T ss_pred cC
Confidence 63
No 42
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.7e-36 Score=309.73 Aligned_cols=291 Identities=17% Similarity=0.208 Sum_probs=211.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----h---------------hhh-ccCCCCCccccchh
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A---------------STC-VGTLEFRSVAEPIA 121 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~---------------~~~-~g~~~~~~~~~~~~ 121 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+...... + ... .|. .......++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi-~~~~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGI-KYPEPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTC-CCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCc-ccCCCccCHH
Confidence 478999999999999999999999999999997665321100 0 000 011 1000001111
Q ss_pred hh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCc---cccCCCceeeeeCCeEEEcCCCCccC
Q 010845 122 RI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDE---LRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 122 ~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~---~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
.+ ........++.++.+++..++. +.+.+...++. .....++..++.||+||+|||+.|..
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 10 0111223578888887766654 45555321100 00000112479999999999999887
Q ss_pred CC-CCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCC
Q 010845 185 FG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (499)
Q Consensus 185 ~~-ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~ 263 (499)
|+ +| .+.. +.+..++.. ... ..++++|||||++|+|+|..|.+++
T Consensus 163 ~~~i~-~~~~---v~~~~~~~~----------~~~----------~~~~vvViGgG~ig~E~A~~l~~~G---------- 208 (482)
T 1ojt_A 163 LPFIP-EDPR---IIDSSGALA----------LKE----------VPGKLLIIGGGIIGLEMGTVYSTLG---------- 208 (482)
T ss_dssp CSSCC-CCTT---EECHHHHTT----------CCC----------CCSEEEEESCSHHHHHHHHHHHHHT----------
T ss_pred CCCCC-ccCc---EEcHHHHhc----------ccc----------cCCeEEEECCCHHHHHHHHHHHHcC----------
Confidence 76 66 3222 234333221 111 2359999999999999999999887
Q ss_pred CCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECC----CcEEeeeEEEEcCCC
Q 010845 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND----GTEVPYGLLVWSTGV 333 (499)
Q Consensus 264 ~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~----g~~i~~D~vi~a~G~ 333 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .+++++ |+++++|.||+|+|+
T Consensus 209 ----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 209 ----SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ----CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred ----CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 899999987 7899999999999999999999999999 89988643 366666 778999999999999
Q ss_pred Ccch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 334 GPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 334 ~p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|+. + ++.++++++++|+|.||+++|| +.|||||+|||+.. +++++.|.+||+++|.||.
T Consensus 285 ~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~~~g~~aa~~i~ 347 (482)
T 1ojt_A 285 APNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ---------PMLAHKAVHEGHVAAENCA 347 (482)
T ss_dssp EECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS---------SCCHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCC---------CccHHHHHHHHHHHHHHHc
Confidence 9994 4 5788999988899999999999 99999999999951 6788999999999999986
No 43
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=4.4e-36 Score=311.02 Aligned_cols=284 Identities=24% Similarity=0.293 Sum_probs=213.5
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----h-----------hhh-----ccCC------CC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A-----------STC-----VGTL------EF 113 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~-----------~~~-----~g~~------~~ 113 (499)
+.+++|+|||||+||+++|..|++.|++|+|||++. +...... + ... .+.. +.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 345899999999999999999999999999999764 2211000 0 000 0100 00
Q ss_pred Ccccc-------chhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC-
Q 010845 114 RSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF- 185 (499)
Q Consensus 114 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~- 185 (499)
..+.. .+...........++.++.+++..++.....+... + .++.||+||||||+.|..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~----g--------~~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVS----G--------KKYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEET----T--------EEEECSCEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEEC----C--------EEEEeeEEEEccCCCCCCCC
Confidence 00000 01111111122357888888888888776666532 1 4799999999999999998
Q ss_pred --CCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCC
Q 010845 186 --GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (499)
Q Consensus 186 --~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~ 263 (499)
++||.+ +. .+..+. +.....| ++++|||||++|+|+|..+.+++
T Consensus 165 ~~~i~G~~-~~---~~~~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g---------- 210 (478)
T 3dk9_A 165 ESQIPGAS-LG---ITSDGF----------FQLEELP----------GRSVIVGAGYIAVEMAGILSALG---------- 210 (478)
T ss_dssp TTTSTTGG-GS---BCHHHH----------TTCCSCC----------SEEEEECCSHHHHHHHHHHHHTT----------
T ss_pred cCCCCCCc-ee---EchHHh----------hchhhcC----------ccEEEECCCHHHHHHHHHHHHcC----------
Confidence 899975 21 222221 2222223 59999999999999999999887
Q ss_pred CCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e----EEECC---C----cEEeeeEEE
Q 010845 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K----LILND---G----TEVPYGLLV 328 (499)
Q Consensus 264 ~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~--~----v~~~~---g----~~i~~D~vi 328 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ + +.+.+ | +++++|.||
T Consensus 211 ----~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 211 ----SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ----CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ----CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 899999986 7889999999999999999999999999 89888642 3 55554 2 679999999
Q ss_pred EcCCCCcch--h-cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 329 WSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 329 ~a~G~~p~~--~-~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
+|+|++|+. + ++.++++++++|+|.||+++|| +.|||||+|||+. . |++++.|..||+.+|+||..
T Consensus 287 ~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~------~---~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 287 WAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG------K---ALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp ECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC------S---SCCHHHHHHHHHHHHHHHHS
T ss_pred EeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC------C---CccHhHHHHHHHHHHHHHcC
Confidence 999999994 3 6788999999999999999999 9999999999993 2 78899999999999999864
No 44
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.2e-36 Score=309.94 Aligned_cols=285 Identities=19% Similarity=0.244 Sum_probs=209.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc-------cc---hh-----hhhc---cCCCC-Cccccchhh
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-------PL---LA-----STCV---GTLEF-RSVAEPIAR 122 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~-------~~---~~-----~~~~---g~~~~-~~~~~~~~~ 122 (499)
+++|+|||||+||+++|..|++.|++|+|||++. +... |. +. .... ..... .....++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 3689999999999999999999999999999973 2211 00 00 0000 00000 000001110
Q ss_pred --------------hccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCC
Q 010845 123 --------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (499)
Q Consensus 123 --------------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ip 188 (499)
.........++.++.+++..+ +.+.+.+...+ + +..++.||+||+|||+.|..|+++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~i--d~~~v~V~~~~-G------~~~~~~~d~lViAtG~~~~~~~~~ 152 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFA--DANTLLVDLND-G------GTESVTFDNAIIATGSSTRLVPGT 152 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEES--SSSEEEEEETT-S------CCEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCeEEEEeCC-C------ceEEEEcCEEEECCCCCCCCCCCC
Confidence 001112235788887776554 44556554311 1 114799999999999999988888
Q ss_pred CccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 010845 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (499)
Q Consensus 189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~ 268 (499)
|.+.. +.+..++.. ... ..++++|||||++|+|+|..+.+++ .
T Consensus 153 g~~~~---~~~~~~~~~----------~~~----------~~~~vvViGgG~~g~E~A~~l~~~g--------------~ 195 (464)
T 2a8x_A 153 SLSAN---VVTYEEQIL----------SRE----------LPKSIIIAGAGAIGMEFGYVLKNYG--------------V 195 (464)
T ss_dssp CCBTT---EECHHHHHT----------CSS----------CCSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred CCCce---EEecHHHhh----------ccc----------cCCeEEEECCcHHHHHHHHHHHHcC--------------C
Confidence 87543 223333321 111 2359999999999999999999887 8
Q ss_pred EEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e--EEEC-CC--cEEeeeEEEEcCCCCcch-h
Q 010845 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILN-DG--TEVPYGLLVWSTGVGPST-L 338 (499)
Q Consensus 269 ~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~--~--v~~~-~g--~~i~~D~vi~a~G~~p~~-~ 338 (499)
+|+++++. +++|.+++++.+.+.+.|++.||+++++ +|.+++.+ . +.++ +| +++++|.||+|+|.+|+. +
T Consensus 196 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 196 DVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred eEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 99999987 7899999999999999999999999999 89998753 2 4443 66 689999999999999994 4
Q ss_pred --cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 339 --VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 339 --~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
++.++++++++|+|.||+++|| +.|||||+|||+.. +++++.|.+||+++|+||.
T Consensus 276 l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 276 YGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL---------LQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp SCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS---------SCSHHHHHHHHHHHHHHHH
T ss_pred CCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC---------ccCHHHHHHHHHHHHHHhc
Confidence 5777898888899999999998 99999999999951 6788999999999999986
No 45
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-36 Score=312.04 Aligned_cols=287 Identities=22% Similarity=0.280 Sum_probs=212.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh----------------h-hccCCCCCccccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS----------------T-CVGTLEFRSVAEP 119 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~----------------~-~~g~~~~~~~~~~ 119 (499)
.+++|+|||||+||+++|..|++.|++|+|||+++.+...... +. . ..|. .......+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~-~~~~~~~~ 83 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGV-KVSNVEID 83 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTE-EESCEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCc-ccCCCccC
Confidence 4589999999999999999999999999999998765432110 00 0 0010 00000001
Q ss_pred hhh--------------hccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 120 IAR--------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 120 ~~~--------------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.. .........++.++.+++..++. +.+.+...+ + +...+.||+||+|||+.|..|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~~~-G------~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP--SEISVDTIE-G------ENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEET--TEEEECCSS-S------CCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEEEeCC-C------ceEEEEcCEEEECCCCCCCCC
Confidence 111 00111222467888877666765 345554311 1 124799999999999999988
Q ss_pred CCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010845 186 GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (499)
Q Consensus 186 ~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~ 265 (499)
+++|.+.. .+.+..++. .... ..++|+|||||++|+|+|..|.+.+
T Consensus 155 ~~~g~~~~--~v~~~~~~~----------~~~~----------~~~~vvViGgG~~g~e~A~~l~~~g------------ 200 (470)
T 1dxl_A 155 PGVTIDEK--KIVSSTGAL----------ALSE----------IPKKLVVIGAGYIGLEMGSVWGRIG------------ 200 (470)
T ss_dssp TTBCCCSS--SEECHHHHT----------TCSS----------CCSEEEESCCSHHHHHHHHHHHHHT------------
T ss_pred CCCCCCcc--cEEeHHHhh----------hhhh----------cCCeEEEECCCHHHHHHHHHHHHcC------------
Confidence 88887531 122332221 1111 2359999999999999999999887
Q ss_pred CceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEC---CC--cEEeeeEEEEcCCCC
Q 010845 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVG 334 (499)
Q Consensus 266 ~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~---~g--~~i~~D~vi~a~G~~ 334 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .+.++ +| +++++|.||+|+|++
T Consensus 201 --~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 201 --SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred --CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 899999987 7889999999999999999999999999 89999864 24443 45 689999999999999
Q ss_pred cch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 335 PST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 335 p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|+. + ++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+++|.||.
T Consensus 279 p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~ 340 (470)
T 1dxl_A 279 PFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG---------PMLAHKAEEDGVACVEYLA 340 (470)
T ss_dssp ECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS---------CCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC---------CccHHHHHHHHHHHHHHHc
Confidence 994 5 6778898888899999999998 99999999999951 6788999999999999986
No 46
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5e-36 Score=308.63 Aligned_cols=283 Identities=21% Similarity=0.303 Sum_probs=210.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hhh-----------hh-----ccCCCCCccccchh
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------TC-----VGTLEFRSVAEPIA 121 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~~-----------~~-----~g~~~~~~~~~~~~ 121 (499)
+++|+|||||+||+++|..|++.|++|+|||++ .+..... .+. .. .|. .......++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGI-KAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTE-ECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCc-ccCCCccCHH
Confidence 478999999999999999999999999999997 3221100 000 00 010 0000001111
Q ss_pred h--------------hccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCC
Q 010845 122 R--------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (499)
Q Consensus 122 ~--------------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~i 187 (499)
. .........++.++.+++..++.. .+.+...+ + ..++.||+||+|||+.|..|++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~--~v~V~~~~-G-------~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDAN--TVRVVNGD-S-------AQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETT--EEEEEETT-E-------EEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCC--eEEEEeCC-C-------cEEEEeCEEEEecCCCCCCCCC
Confidence 1 111122346788888877777653 45544311 1 1479999999999999998888
Q ss_pred CCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 188 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
+|.++. +.+..++.. ... ..++|+|||||++|+|+|..|.+.+
T Consensus 151 ~g~~~~---v~~~~~~~~----------~~~----------~~~~vvViGgG~~g~e~A~~l~~~g-------------- 193 (455)
T 1ebd_A 151 FKFSNR---ILDSTGALN----------LGE----------VPKSLVVIGGGYIGIELGTAYANFG-------------- 193 (455)
T ss_dssp BCCCSS---EECHHHHHT----------CSS----------CCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCccce---EecHHHHhc----------ccc----------CCCeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 887543 223333221 111 2359999999999999999999887
Q ss_pred eEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--CeE--EEC---CCcEEeeeEEEEcCCCCcch-
Q 010845 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILN---DGTEVPYGLLVWSTGVGPST- 337 (499)
Q Consensus 268 ~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~v--~~~---~g~~i~~D~vi~a~G~~p~~- 337 (499)
.+|+++++. +++|.+++++.+.+.+.+++.||+++++ +|.+++. +.+ .++ +++++++|.||+|+|.+|+.
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 899999987 7889999999999999999999999999 8988864 233 333 45689999999999999994
Q ss_pred h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 338 L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 338 ~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+ ++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+.+|+||.
T Consensus 274 ~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 274 ELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG---------PALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp SSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHT
T ss_pred cCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHHc
Confidence 4 5777888888899999999998 99999999999951 6788999999999999986
No 47
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.8e-36 Score=312.16 Aligned_cols=286 Identities=23% Similarity=0.288 Sum_probs=213.3
Q ss_pred CcEEEECCchHHHHHHHhccCC---CCeEEEEcCCCCcccc-------c---chhh---------hh-ccCCC-CCcccc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFT-------P---LLAS---------TC-VGTLE-FRSVAE 118 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~---g~~V~lie~~~~~~~~-------~---~~~~---------~~-~g~~~-~~~~~~ 118 (499)
++|||||||+||+++|..|++. |++|+|||+++ +... | ++.. .. .|... ......
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 6899999999999999999998 99999999986 3221 0 0000 00 01100 000001
Q ss_pred chhhh--------------ccccccCCCeEEEEEEEEEEECC----CCEEEEeeecCccccCCCceeeeeCCeEEEcCCC
Q 010845 119 PIARI--------------QPAISREPGSYFFLSHCAGIDTD----NHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180 (499)
Q Consensus 119 ~~~~~--------------~~~~~~~~~~~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~ 180 (499)
++..+ ...+....++.++.+++..++.+ .+.+.+...+ + +...+.||+||+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~-g------~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAAD-G------STSEHEADVVLVATGA 154 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTT-S------CEEEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCC-C------cEEEEEeCEEEEcCCC
Confidence 11110 11122235788888888888773 2455554311 1 1137999999999999
Q ss_pred CccCCCCCCcccc-CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHH
Q 010845 181 EASTFGIHGVKEN-ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ 259 (499)
Q Consensus 181 ~~~~~~ipG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~ 259 (499)
.|..|++||.+.. .++.. +. +.... ..++++|||+|++|+|+|..+..++
T Consensus 155 ~p~~p~i~g~~~~~v~~~~---~~----------~~~~~----------~~~~vvViGgG~ig~E~A~~l~~~g------ 205 (499)
T 1xdi_A 155 SPRILPSAQPDGERILTWR---QL----------YDLDA----------LPDHLIVVGSGVTGAEFVDAYTELG------ 205 (499)
T ss_dssp EECCCGGGCCCSSSEEEGG---GG----------GGCSS----------CCSSEEEESCSHHHHHHHHHHHHTT------
T ss_pred CCCCCCCCCCCcCcEEehh---Hh----------hhhhc----------cCCeEEEECCCHHHHHHHHHHHHcC------
Confidence 9999989987532 22221 11 11111 2359999999999999999999887
Q ss_pred hcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCC
Q 010845 260 RYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 260 ~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.+.+|+++++|.||+|+|.
T Consensus 206 --------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 206 --------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp --------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred --------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCC
Confidence 899999987 7889999999999999999999999999 89998754 245568889999999999999
Q ss_pred Ccch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 334 GPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 334 ~p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+|+. + ++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+++|+||.
T Consensus 278 ~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---------~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 278 VPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL---------LPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp EECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS---------CSCHHHHHHHHHHHHHHHT
T ss_pred CcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHhc
Confidence 9995 5 6778899988899999999999 99999999999952 5678999999999999985
No 48
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.3e-35 Score=307.49 Aligned_cols=314 Identities=19% Similarity=0.252 Sum_probs=220.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchh----------------hh----h-ccCCCCCccccch
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA----------------ST----C-VGTLEFRSVAEPI 120 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~----------------~~----~-~g~~~~~~~~~~~ 120 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+....... .. . .|.........++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4789999999999999999999999999999976543221100 00 0 0000000000111
Q ss_pred hhh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceee------eeCCeEEEcCCC
Q 010845 121 ARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFK------ISYDKLVIALGA 180 (499)
Q Consensus 121 ~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~------i~yd~LViAtG~ 180 (499)
..+ ........++.++.++...+ +.+.+.+...+ + +... +.||+||+|||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~V~~~~-G------~~~~~~~~~~i~~d~lViAtGs 155 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE--DETKIRVTPVD-G------LEGTVKEDHILDVKNIIVATGS 155 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES--SSSEEEEECCT-T------CTTCCSSCEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEecC-C------CcccccccceEEeCEEEECcCC
Confidence 110 01111235788887765544 44556554321 1 0124 999999999999
Q ss_pred CccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHh
Q 010845 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (499)
Q Consensus 181 ~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~ 260 (499)
.|. .+||.......+.+..++.. .... .++++|||||++|+|+|..|++.+
T Consensus 156 ~p~--~~~g~~~~~~~v~~~~~~~~----------~~~~----------~~~vvViGgG~~g~e~A~~l~~~g------- 206 (478)
T 1v59_A 156 EVT--PFPGIEIDEEKIVSSTGALS----------LKEI----------PKRLTIIGGGIIGLEMGSVYSRLG------- 206 (478)
T ss_dssp EEC--CCTTCCCCSSSEECHHHHTT----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT-------
T ss_pred CCC--CCCCCCCCCceEEcHHHHHh----------hhcc----------CceEEEECCCHHHHHHHHHHHHcC-------
Confidence 873 45665321122334433321 1112 359999999999999999999887
Q ss_pred cCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C----eEEEC-----CCcEEeeeEE
Q 010845 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILN-----DGTEVPYGLL 327 (499)
Q Consensus 261 ~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~----~v~~~-----~g~~i~~D~v 327 (499)
.+||++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++. + .+.++ +++++++|.|
T Consensus 207 -------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~v 279 (478)
T 1v59_A 207 -------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVL 279 (478)
T ss_dssp -------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred -------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEE
Confidence 899999987 7889999999999999999999999999 8999874 2 35554 3568999999
Q ss_pred EEcCCCCcch---hcccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 328 VWSTGVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 328 i~a~G~~p~~---~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
|+|+|.+|+. +++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+.+|+||..
T Consensus 280 v~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 280 LVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFG---------PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp EECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCCC---------cccHHHHHHHHHHHHHHHcC
Confidence 9999999994 67888999988999999999998 99999999999952 67789999999999999874
Q ss_pred HHHhCCCCCCCcCcCCCCCCceecccceEEEecCC
Q 010845 405 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 439 (499)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lG~~ 439 (499)
.. .. .++. ..|+......+++++|..
T Consensus 350 ~~----~~----~~~~-~~p~~~~~~~~~a~vG~~ 375 (478)
T 1v59_A 350 GH----GH----VNYN-NIPSVMYSHPEVAWVGKT 375 (478)
T ss_dssp SC----CC----CCTT-SCCEEECSSSEEEEEECC
T ss_pred CC----CC----CCCC-CCCEEEEcCCcEEEEECC
Confidence 21 10 1112 246665555677887753
No 49
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.8e-35 Score=290.92 Aligned_cols=284 Identities=13% Similarity=0.142 Sum_probs=209.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch--hhh----hccCC--CCCccccchhhhccccccCCCe
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL--AST----CVGTL--EFRSVAEPIARIQPAISREPGS 133 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~--~~~----~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 133 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+...... +.. ..+.. ...++...+.+. +.. .++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~-~~~ 80 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQ---VAP-FNP 80 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHH---HGG-GCC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHH---HHH-cCC
Confidence 479999999999999999999999999999998765432210 000 00000 001111112221 222 345
Q ss_pred EEE-EEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCC---CccCCCCCCccccC-----ccCCCHHHHH
Q 010845 134 YFF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKENA-----TFLREVHHAQ 204 (499)
Q Consensus 134 ~~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~---~~~~~~ipG~~~~~-----~~~~~~~~~~ 204 (499)
.++ ..+|+.++.+.+.+.+... ++ .++.||+||+|||+ .|..+++||.+... ..+++.
T Consensus 81 ~~~~~~~v~~i~~~~~~~~v~~~-~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~---- 147 (335)
T 2zbw_A 81 VYSLGERAETLEREGDLFKVTTS-QG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK---- 147 (335)
T ss_dssp EEEESCCEEEEEEETTEEEEEET-TS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG----
T ss_pred EEEeCCEEEEEEECCCEEEEEEC-CC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch----
Confidence 554 4588888877655555431 11 37899999999999 57777888864321 111111
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCC
Q 010845 205 EIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFD 283 (499)
Q Consensus 205 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~ 283 (499)
+....++|+|||+|++|+|+|..|.+.+ .+|+++++.+ +++ .
T Consensus 148 ---------------------~~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~--~ 190 (335)
T 2zbw_A 148 ---------------------AEFQGKRVLIVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRA--H 190 (335)
T ss_dssp ---------------------GGGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCS--C
T ss_pred ---------------------hhcCCCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCc--c
Confidence 0113469999999999999999998765 8999999874 433 3
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEC---CC--cEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCce
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRI 352 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~---~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i 352 (499)
+...+.+.+.+++.||+++.+ .|.+++.+ .|.++ +| +++++|.||+|+|++|+ ++++.++++.+ +|+|
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i 269 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKI 269 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCee
Confidence 567788888899999999999 89998765 57776 67 68999999999999998 58888888876 6899
Q ss_pred eeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 353 GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 353 ~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.||+++|+ +.|||||+|||+..+. .++++..|..||+.+|+||...+.
T Consensus 270 ~vd~~~~t-~~~~vya~GD~~~~~~------~~~~~~~A~~~g~~aa~~i~~~l~ 317 (335)
T 2zbw_A 270 KVDTTMAT-SIPGVYACGDIVTYPG------KLPLIVLGFGEAAIAANHAAAYAN 317 (335)
T ss_dssp ECCTTCBC-SSTTEEECSTTEECTT------CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred eeCCCCCC-CCCCEEEeccccccCc------chhhhhhhHHHHHHHHHHHHHHhh
Confidence 99999998 9999999999997421 367899999999999999998875
No 50
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.2e-36 Score=295.67 Aligned_cols=291 Identities=16% Similarity=0.163 Sum_probs=206.0
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccccc--chhhh--h---ccCCC---CCccccchhhhcccccc
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP--LLAST--C---VGTLE---FRSVAEPIARIQPAISR 129 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~--~~~~~--~---~g~~~---~~~~~~~~~~~~~~~~~ 129 (499)
..+++|+|||||++|+++|..|++.|++|+|||+++.....+ .+... . .+... ..++...+.. ...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 95 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMRE----QST 95 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHH----HHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHH----HHH
Confidence 345899999999999999999999999999999965211111 00000 0 01110 1111112222 222
Q ss_pred CCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHH
Q 010845 130 EPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRK 209 (499)
Q Consensus 130 ~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~ 209 (499)
..++.++.++|+.++.+.+.+.+.....+ ....+.||+||+|||+.+..|.+||.+.... ..+.........
T Consensus 96 ~~gv~i~~~~v~~i~~~~~~~~v~~~~~~------~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~--~~~~~~~~~~~~ 167 (338)
T 3itj_A 96 KFGTEIITETVSKVDLSSKPFKLWTEFNE------DAEPVTTDAIILATGASAKRMHLPGEETYWQ--KGISACAVCDGA 167 (338)
T ss_dssp HTTCEEECSCEEEEECSSSSEEEEETTCS------SSCCEEEEEEEECCCEEECCCCCTTHHHHBT--TTEESCHHHHTT
T ss_pred HcCCEEEEeEEEEEEEcCCEEEEEEEecC------CCcEEEeCEEEECcCCCcCCCCCCCchhccC--ccEEEchhcccc
Confidence 35778887789999998887776542111 1247899999999999999999999753110 011100100000
Q ss_pred HHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCCHHHHH
Q 010845 210 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRH 288 (499)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~~~~~~ 288 (499)
......++|+|||+|++|+|+|..|.+.+ .+|+++++.. +++ .+
T Consensus 168 ---------------~~~~~~~~v~vvG~G~~g~e~a~~l~~~g--------------~~v~~v~~~~~~~~------~~ 212 (338)
T 3itj_A 168 ---------------VPIFRNKPLAVIGGGDSACEEAQFLTKYG--------------SKVFMLVRKDHLRA------ST 212 (338)
T ss_dssp ---------------SGGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS------CH
T ss_pred ---------------hhhcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccCC------CH
Confidence 00123469999999999999999998876 8999999874 433 23
Q ss_pred HHHHHHHhC-CCEEEeC-ceEEEeCCe-----EEECC-----CcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceee-
Q 010845 289 YATTQLSKS-GVRLVRG-IVKDVDSQK-----LILND-----GTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGI- 354 (499)
Q Consensus 289 ~~~~~l~~~-gV~v~~~-~v~~v~~~~-----v~~~~-----g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~v- 354 (499)
.+.+.+.+. ||+++.+ .|.+++.+. |++++ ++++++|.||+|+|+.|+. ++.. +++++++|++.|
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~ 291 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTV 291 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCC
T ss_pred HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEc
Confidence 445556554 9999999 899987653 77765 4689999999999999995 4444 888899999985
Q ss_pred CCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 355 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 355 d~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|+++++ +.|||||+|||+. ..++.+..|+.||+.||.+|...+.
T Consensus 292 ~~~~~t-~~~~vya~GD~~~--------~~~~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 292 PGSSLT-SVPGFFAAGDVQD--------SKYRQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp TTSSBC-SSTTEEECGGGGC--------SSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred Cccccc-CCCCEEEeeccCC--------CCccceeeehhhhHHHHHHHHHHHh
Confidence 788888 9999999999995 1267899999999999999999886
No 51
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=7.8e-36 Score=307.63 Aligned_cols=278 Identities=20% Similarity=0.245 Sum_probs=208.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc----cchhh-----------h-----hccCCCCCccccchh
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT----PLLAS-----------T-----CVGTLEFRSVAEPIA 121 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~----~~~~~-----------~-----~~g~~~~~~~~~~~~ 121 (499)
+++|+|||||+||+++|..|++.|++|+|||+++ +... ...+. . ..|.. .....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~--~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK--AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE--CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC--CCCCcCHH
Confidence 4799999999999999999999999999999986 2111 00000 0 00110 00011111
Q ss_pred hh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC-
Q 010845 122 RI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG- 186 (499)
Q Consensus 122 ~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~- 186 (499)
.+ ...+....++.++.+++..++. +.|.+. + .++.||+||||||+.|..|+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~----g--------~~~~~d~lViATGs~p~~p~g 148 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG----G--------ERYGAKSLILATGSEPLELKG 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET----T--------EEEEEEEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc----c--------EEEEeCEEEEcCCCCCCCCCC
Confidence 11 0111223578888887777764 566653 1 37999999999999998775
Q ss_pred CCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010845 187 IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (499)
Q Consensus 187 ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~ 266 (499)
+|| ++. +.+..++..+ .. ...++++|||||++|+|+|..|++++
T Consensus 149 i~~-~~~---v~~~~~~~~l----------~~---------~~~~~vvViGgG~~g~e~A~~l~~~g------------- 192 (464)
T 2eq6_A 149 FPF-GED---VWDSTRALKV----------EE---------GLPKRLLVIGGGAVGLELGQVYRRLG------------- 192 (464)
T ss_dssp BCC-SSS---EECHHHHTCG----------GG---------CCCSEEEEECCSHHHHHHHHHHHHTT-------------
T ss_pred CCC-CCc---EEcHHHHHhh----------hh---------hcCCEEEEECCCHHHHHHHHHHHHCC-------------
Confidence 666 222 2244333221 11 01259999999999999999999877
Q ss_pred ceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEC-C--Cc--EEeeeEEEEcCCCCc
Q 010845 267 YIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN-D--GT--EVPYGLLVWSTGVGP 335 (499)
Q Consensus 267 ~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~-~--g~--~i~~D~vi~a~G~~p 335 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.++ + |+ ++++|.||+|+|.+|
T Consensus 193 -~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 193 -AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp -CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred -CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 899999987 6889999999999999999999999999 89988643 25555 6 76 899999999999999
Q ss_pred ch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 336 ST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 336 ~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+. + ++.++++++++|+|.||+++|| +.|+|||+|||+.. +++++.|.+||+.+|+||.
T Consensus 272 ~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~---------~~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 272 RTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARP---------PLLAHKAMREGLIAAENAA 332 (464)
T ss_dssp SCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCS---------SCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHhc
Confidence 94 3 4677888888899999999998 99999999999941 6788999999999999986
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.6e-35 Score=289.95 Aligned_cols=283 Identities=17% Similarity=0.202 Sum_probs=201.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCC-Ccc-ccchhhhccccccCCCeEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEF-RSV-AEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
+++|+|||||+||+++|..|++.|++|+|||++. ................. ..+ ...+...........++.++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 86 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDE 86 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeee
Confidence 4799999999999999999999999999999983 22111100000000000 000 01111111112223467777789
Q ss_pred EEEEECC--CC---EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc---CccCCCHHHHHHHHHHHH
Q 010845 140 CAGIDTD--NH---VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLL 211 (499)
Q Consensus 140 v~~id~~--~~---~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~~ 211 (499)
|+.++.+ .+ .+.+.+ + .++.||+||+|||+.|..|++||.++. ..+.....+ .
T Consensus 87 v~~i~~~~~~~~~~~v~~~~---g--------~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~------~-- 147 (325)
T 2q7v_A 87 VQGVQHDATSHPYPFTVRGY---N--------GEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCD------G-- 147 (325)
T ss_dssp EEEEEECTTSSSCCEEEEES---S--------CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHH------G--
T ss_pred EEEEEeccCCCceEEEEECC---C--------CEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCC------H--
Confidence 9999876 43 444432 2 379999999999999999999997532 111111100 0
Q ss_pred HHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHH
Q 010845 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (499)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~ 291 (499)
. ....++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++.+ .
T Consensus 148 --~------------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~----~ 194 (325)
T 2q7v_A 148 --F------------FYKGKKVVVIGGGDAAVEEGMFLTKFA--------------DEVTVIHRRDTLR-ANKVA----Q 194 (325)
T ss_dssp --G------------GGTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCC-SCHHH----H
T ss_pred --H------------HcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeCCCcCC-cchHH----H
Confidence 0 112359999999999999999998766 8999999874332 23332 3
Q ss_pred HHH-HhCCCEEEeC-ceEEEeCC----eEEEC---CCc--EEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCC
Q 010845 292 TQL-SKSGVRLVRG-IVKDVDSQ----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLR 359 (499)
Q Consensus 292 ~~l-~~~gV~v~~~-~v~~v~~~----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~ 359 (499)
+.+ ++.||+++++ +|.+++.+ +|.++ +|+ ++++|.||+|+|++|+ ++++.+ ++++++|+|.||+++|
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~ 273 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIY 273 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTB
T ss_pred HHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCc
Confidence 334 4569999999 89998765 57775 665 7999999999999999 577766 7778889999999999
Q ss_pred CCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 360 ~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+ +.|||||+|||+.. .++++..|.+||+.+|.||...+.
T Consensus 274 t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 274 T-NIPMLFAAGDVSDY--------IYRQLATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp C-SSTTEEECSTTTCS--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCEEEeecccCc--------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 99999999999952 267899999999999999999886
No 53
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-35 Score=305.28 Aligned_cols=289 Identities=22% Similarity=0.260 Sum_probs=209.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhh---------------hhcc-----CCCCCccccch
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---------------TCVG-----TLEFRSVAEPI 120 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~---------------~~~g-----~~~~~~~~~~~ 120 (499)
.++||+|||||+||+++|..|++.|++|+|||+++.+........ .... .........++
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 357999999999999999999999999999999876543211000 0000 00000000111
Q ss_pred hh--------------hccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 121 AR--------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 121 ~~--------------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
.. .........++.++.+++..++. +.+.+...+ ++..++.||+||||||+.| +.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~v~~~~-------g~~~~~~~d~lViATGs~p--~~ 172 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQ--GKVSVTNEK-------GEEQVLEAKNVVIATGSDV--AG 172 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSS--SEEEEECTT-------SCEEEEECSEEEECCCEEC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEeCC-------CceEEEEeCEEEEccCCCC--CC
Confidence 11 01111223578888888777654 455554311 1235799999999999985 46
Q ss_pred CCCccc--cCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCC
Q 010845 187 IHGVKE--NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (499)
Q Consensus 187 ipG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~ 264 (499)
+||+.+ ....+.+..+. +.... ..++|+|||||++|+|+|..|.+++
T Consensus 173 ipg~~~~~~~~~~~~~~~~----------~~~~~----------~~~~vvViGgG~~g~E~A~~l~~~g----------- 221 (491)
T 3urh_A 173 IPGVEVAFDEKTIVSSTGA----------LALEK----------VPASMIVVGGGVIGLELGSVWARLG----------- 221 (491)
T ss_dssp BTTBCCCCCSSSEECHHHH----------TSCSS----------CCSEEEEECCSHHHHHHHHHHHHHT-----------
T ss_pred CCCcccccCCeeEEehhHh----------hhhhh----------cCCeEEEECCCHHHHHHHHHHHHcC-----------
Confidence 777642 11122232221 11122 2359999999999999999999887
Q ss_pred CCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECC---C--cEEeeeEEEEcCCC
Q 010845 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND---G--TEVPYGLLVWSTGV 333 (499)
Q Consensus 265 ~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~---g--~~i~~D~vi~a~G~ 333 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.+++ | +++++|.||+|+|+
T Consensus 222 ---~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 222 ---AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ---CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ---CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 899999987 7889999999999999999999999999 88888642 255542 4 68999999999999
Q ss_pred Ccch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 334 GPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 334 ~p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
+|+. + ++..+++++++|+|.||+++|| +.|+|||+|||+. . |+++..|..||+.+|+||..
T Consensus 299 ~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~------~---~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 299 KPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVR------G---PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp EECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS------S---CCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC------C---ccchhHHHHHHHHHHHHHcC
Confidence 9994 3 5677899999999999999999 9999999999994 2 68899999999999999863
No 54
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=7.1e-35 Score=302.86 Aligned_cols=317 Identities=19% Similarity=0.175 Sum_probs=223.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC--------cccc-------c---chh-----hhh---cc--CCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH--------MVFT-------P---LLA-----STC---VG--TLEF 113 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~--------~~~~-------~---~~~-----~~~---~g--~~~~ 113 (499)
.+||+|||||+||+.+|.++++.|.+|+|||+... +..+ | ++. ... .. .+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 37999999999999999999999999999997542 2111 1 000 000 00 0001
Q ss_pred Cccccchhhh--------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCC
Q 010845 114 RSVAEPIARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179 (499)
Q Consensus 114 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG 179 (499)
.....++..+ .....+..++.++.+...-++...-.|...... +....+.+|++|||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~-------~~~~~i~a~~iiIATG 194 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDL-------SKEETVTGKYILIATG 194 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--C-------CCEEEEEEEEEEECCC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccC-------CceEEEeeeeEEeccC
Confidence 1111111111 011122367899999888887643333332211 1246899999999999
Q ss_pred CCccCCCCCCc-cccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHH
Q 010845 180 AEASTFGIHGV-KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR 258 (499)
Q Consensus 180 ~~~~~~~ipG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~ 258 (499)
++|..|+.++. .+..++ -++ .|.+..+|. +++|||||++|+|+|..++.++
T Consensus 195 s~P~~P~~~~~~~~~~~t---s~~----------~l~l~~lP~----------~lvIIGgG~IGlE~A~~~~~lG----- 246 (542)
T 4b1b_A 195 CRPHIPDDVEGAKELSIT---SDD----------IFSLKKDPG----------KTLVVGASYVALECSGFLNSLG----- 246 (542)
T ss_dssp EEECCCSSSBTHHHHCBC---HHH----------HTTCSSCCC----------SEEEECCSHHHHHHHHHHHHHT-----
T ss_pred CCCCCCCcccCCCccccC---chh----------hhccccCCc----------eEEEECCCHHHHHHHHHHHhcC-----
Confidence 99998855443 233222 221 255666775 9999999999999999999998
Q ss_pred HhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCC
Q 010845 259 QRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 259 ~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+||++++.++||.+++++.+.+.+.|++.||+++++ .+.+++.. .+.+.+++++.+|.|++|+|+
T Consensus 247 ---------~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 247 ---------YDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp ---------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred ---------CeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 8999999888999999999999999999999999999 78777543 356778889999999999999
Q ss_pred Ccch-h--cccCCCCCCCCCc-eeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 010845 334 GPST-L--VKSLDLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 409 (499)
Q Consensus 334 ~p~~-~--~~~~~l~~~~~G~-i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~~~ 409 (499)
+||. . ++..++.++.+|. |.||+++|| +.|||||+|||+. ..|++++.|.+||++++.||.....
T Consensus 318 ~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~--------~~p~La~~A~~eg~~aa~~i~g~~~-- 386 (542)
T 4b1b_A 318 KGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE--------NVPELAPVAIKAGEILARRLFKDSD-- 386 (542)
T ss_dssp EESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT--------TCCCCHHHHHHHHHHHHHHHHSCCC--
T ss_pred cCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC--------CchhHHHHHHHHHHHHHHHHhcCCC--
Confidence 9994 2 4456777777666 588999999 9999999999993 2378999999999999999863211
Q ss_pred CCCCCCcCcCCCCCCceecccceEEEecCC
Q 010845 410 GGRANSAKDMELGDPFVYRHLGSMATIGRY 439 (499)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~g~~~~lG~~ 439 (499)
+ ..++.. .|..--...+++++|..
T Consensus 387 --~---~~d~~~-iP~~vft~PeiA~VGlT 410 (542)
T 4b1b_A 387 --E---IMDYSY-IPTSIYTPIEYGACGYS 410 (542)
T ss_dssp --C---CCCCSS-CCEEECSSSCEEEEECC
T ss_pred --c---ccCCCC-CceEEeCCCCeEEEeCC
Confidence 1 011122 45444444577787753
No 55
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.1e-35 Score=289.78 Aligned_cols=285 Identities=18% Similarity=0.169 Sum_probs=204.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccc-cchhhhccccccCCCeEEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA-EPIARIQPAISREPGSYFFLSHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v 140 (499)
.++|+|||||+||+++|..|++.|++|+|||+.. ...................+. ..+...........++.++.++|
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEeeE
Confidence 4789999999999999999999999999999953 211110000000000000000 11111111122335777777889
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc---CccCCCHHHHHHHHHHHHHHHhhc
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
+.++.+.+.+.+.. ++ .++.||+||+|||+.+..|++||.+++ ........+ .
T Consensus 95 ~~i~~~~~~~~v~~--~~--------~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~-----~--------- 150 (319)
T 3cty_A 95 RSIKKTQGGFDIET--ND--------DTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCD-----G--------- 150 (319)
T ss_dssp EEEEEETTEEEEEE--SS--------SEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHH-----G---------
T ss_pred EEEEEeCCEEEEEE--CC--------CEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecc-----h---------
Confidence 99988777555543 12 378999999999999999999987432 111111100 0
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhC
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKS 297 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~ 297 (499)
.....++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++. +.+.+++.
T Consensus 151 --------~~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~i~~~~~~~-~~~~----l~~~l~~~ 203 (319)
T 3cty_A 151 --------YLFKGKRVVTIGGGNSGAIAAISMSEYV--------------KNVTIIEYMPKYM-CENA----YVQEIKKR 203 (319)
T ss_dssp --------GGGBTSEEEEECCSHHHHHHHHHHTTTB--------------SEEEEECSSSSCC-SCHH----HHHHHHHT
T ss_pred --------hhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CcEEEEEcCCccC-CCHH----HHHHHhcC
Confidence 0123369999999999999999998766 8999999874332 2333 45556689
Q ss_pred CCEEEeC-ceEEEeCC-----eEEEC---CCc--EEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCC
Q 010845 298 GVRLVRG-IVKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQD 365 (499)
Q Consensus 298 gV~v~~~-~v~~v~~~-----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~ 365 (499)
||+++.+ ++.+++.+ ++.+. +|+ ++++|.||+|+|+.|+ +++..++++++++|+|.||+++|+ +.|+
T Consensus 204 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t-~~~~ 282 (319)
T 3cty_A 204 NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRT-SVPG 282 (319)
T ss_dssp TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBC-SSTT
T ss_pred CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCcc-CCCC
Confidence 9999999 89888754 46665 565 6999999999999999 688888898888999999999998 9999
Q ss_pred eEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 366 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 366 Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|||+|||+.. .++++..|+.||+.+|.||...+.
T Consensus 283 vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 283 VYAAGDVTSG--------NFAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp EEECSTTBTT--------CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecccCc--------chhhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999952 257899999999999999998875
No 56
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.9e-35 Score=287.73 Aligned_cols=285 Identities=16% Similarity=0.106 Sum_probs=202.7
Q ss_pred CcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCCcccccchhhhhccCCCC-Cccc-cchhhhccccccCCCeEEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVFTPLLASTCVGTLEF-RSVA-EPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
++|+|||||+||+++|..|++.|+ +|+|||++.. ................ ..+. ..+...........++.++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ 80 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP-GGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTA 80 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST-TCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC-CcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 689999999999999999999999 9999999631 1110000000000000 0010 1111111112233567777788
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc---CccCCCHHHHHHHHHHHHHHHhh
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
|+.++.+.+.+.+... ++ .++.||+||+|||+.+..|++||.+++ ..+.....+ . .
T Consensus 81 v~~i~~~~~~~~v~~~-~g--------~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~-----~-----~-- 139 (311)
T 2q0l_A 81 VQRVSKKDSHFVILAE-DG--------KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD-----G-----F-- 139 (311)
T ss_dssp EEEEEEETTEEEEEET-TS--------CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH-----G-----G--
T ss_pred EEEEEEcCCEEEEEEc-CC--------CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC-----h-----h--
Confidence 9999887775554331 12 379999999999999999999997531 111111100 0 0
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHH-
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS- 295 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~- 295 (499)
....++|+|||+|++|+|+|..|.+.+ .+|+++++.+.++ .++. +.+.+.
T Consensus 140 ----------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~~ 190 (311)
T 2q0l_A 140 ----------FYKNKEVAVLGGGDTAVEEAIYLANIC--------------KKVYLIHRRDGFR-CAPI----TLEHAKN 190 (311)
T ss_dssp ----------GGTTSEEEEECCSHHHHHHHHHHHTTS--------------SEEEEECSSSSCC-SCHH----HHHHHHT
T ss_pred ----------hcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeeCCccC-CCHH----HHHHHhh
Confidence 112369999999999999999998876 8999999874332 3443 334444
Q ss_pred hCCCEEEeC-ceEEEeCC-----eEEEC---CCc--EEeeeEEEEcCCCCcc-hhcccCC----CCCCCCCceeeCCCCC
Q 010845 296 KSGVRLVRG-IVKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLD----LPKSPGGRIGIDEWLR 359 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~-----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~----l~~~~~G~i~vd~~l~ 359 (499)
+.||+++.+ .+.+++.+ .++++ +|+ ++++|.||+|+|++|+ +++..++ ++++++|+|.||+++|
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~ 270 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMK 270 (311)
T ss_dssp CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCB
T ss_pred CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccc
Confidence 579999998 88888654 46775 675 7999999999999999 6777764 8888889999999999
Q ss_pred CCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 360 ~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
| +.|||||+|||+.. .|+++..|.+||+.+|.||...++
T Consensus 271 t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 271 T-NVQGLFAAGDIRIF--------APKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp C-SSTTEEECSTTBTT--------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEcccccCc--------chHHHHHHHHhHHHHHHHHHHHHh
Confidence 8 99999999999952 267899999999999999998875
No 57
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=9.2e-36 Score=291.45 Aligned_cols=285 Identities=16% Similarity=0.093 Sum_probs=203.4
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEE-EcCCCCcccccchhhhhccCCCCC-c-cccchhhhccccccCCCeEEEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRNHMVFTPLLASTCVGTLEFR-S-VAEPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~l-ie~~~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 137 (499)
.+++|+|||||+|||++|..|++.|++|+| ||+. .+................. . ....+...........++.++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 467999999999999999999999999999 9994 3222111110000000000 0 0011222222233345778888
Q ss_pred EEEEEEECCC--CEEE--EeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc---CccCCCHHHHHHHHHHH
Q 010845 138 SHCAGIDTDN--HVVH--CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKL 210 (499)
Q Consensus 138 ~~v~~id~~~--~~v~--~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~ 210 (499)
++|+.+ .+. +.+. +.. + . ++.||+||+|||+.|..|.+||.+.. .+......+ .
T Consensus 82 ~~v~~i-~~~~~~~~~v~~~~---~-------~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~-----~-- 142 (315)
T 3r9u_A 82 VGVEQI-LKNSDGSFTIKLEG---G-------K-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCD-----G-- 142 (315)
T ss_dssp CCEEEE-EECTTSCEEEEETT---S-------C-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHH-----G--
T ss_pred EEEEEE-ecCCCCcEEEEEec---C-------C-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccc-----c--
Confidence 888888 544 4555 332 1 2 78999999999999999999997542 111111110 0
Q ss_pred HHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHH
Q 010845 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA 290 (499)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~ 290 (499)
.....++++|||+|++|+|+|..|.+.+ .+|+++++.+.++ .++. ..
T Consensus 143 ---------------~~~~~~~v~viG~g~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~-~~~~---~~ 189 (315)
T 3r9u_A 143 ---------------FFYKNKEVAVLGGGDTALEEALYLANIC--------------SKIYLIHRRDEFR-AAPS---TV 189 (315)
T ss_dssp ---------------GGGTTSEEEEECCBHHHHHHHHHHHTTS--------------SEEEEECSSSSCB-SCHH---HH
T ss_pred ---------------cccCcCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCCCCC-CCHH---HH
Confidence 0122369999999999999999998876 8999999874332 2333 33
Q ss_pred HHHHHhCCCEEEeC-ceEEEeCCe-----EEEC--CCc--EEeeeEEEEcCCCCcch-hccc---CC-CCCCCCCceeeC
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDSQK-----LILN--DGT--EVPYGLLVWSTGVGPST-LVKS---LD-LPKSPGGRIGID 355 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~~~-----v~~~--~g~--~i~~D~vi~a~G~~p~~-~~~~---~~-l~~~~~G~i~vd 355 (499)
.+.+++.||+++.+ .|.+++.+. +++. +|+ ++++|.||+|+|.+|+. ++.. ++ ++++++|+|.||
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd 269 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVD 269 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCC
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeC
Confidence 45567899999988 888886543 6665 775 79999999999999995 4444 44 888889999999
Q ss_pred CCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 356 ~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+++|| +.|||||+|||+.. .|+++..|+.||+.+|.+|.+.+.
T Consensus 270 ~~~~t-~~~~v~a~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 270 LKMQT-SVAGLFAAGDLRKD--------APKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp TTCBC-SSTTEEECGGGBTT--------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccc-CCCCEEEeecccCC--------chhhhhhHHhhHHHHHHHHHHHHH
Confidence 99999 99999999999842 278899999999999999999886
No 58
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.2e-35 Score=304.40 Aligned_cols=281 Identities=19% Similarity=0.267 Sum_probs=211.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh-----------h---hc--c----C--CCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS-----------T---CV--G----T--LEFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~-----------~---~~--g----~--~~~~~ 115 (499)
+++|+|||||++|+++|..|++.|++|+|||++ .+...... +. . .. + . .+...
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 479999999999999999999999999999994 32221000 00 0 00 0 0 00000
Q ss_pred ccc-------chhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCcc-CCCC
Q 010845 116 VAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFGI 187 (499)
Q Consensus 116 ~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~-~~~i 187 (499)
+.. .+......+....++.++.+++..++ .+.+.+.. + ...+.||+||+|||+.|. .|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~v~~~~--~--------~~~~~~d~lviAtG~~p~~~p~i 151 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PNTVKLLA--S--------GKTVTAERIVIAVGGHPSPHDAL 151 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETT--T--------TEEEEEEEEEECCCEEECCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEec--C--------CeEEEeCEEEEecCCCcccCCCC
Confidence 000 01111111122247788888777765 45666621 1 147999999999999999 8999
Q ss_pred CCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 188 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
||.+ .. .+..+. +..... .++++|||+|++|+|+|..+..++
T Consensus 152 ~G~~-~~---~~~~~~----------~~~~~~----------~~~v~ViGgG~~g~e~A~~l~~~g-------------- 193 (463)
T 4dna_A 152 PGHE-LC---ITSNEA----------FDLPAL----------PESILIAGGGYIAVEFANIFHGLG-------------- 193 (463)
T ss_dssp TTGG-GC---BCHHHH----------TTCSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-cc---ccHHHH----------hhhhcC----------CCeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 9974 22 222222 112222 359999999999999999999887
Q ss_pred eEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEE-ECCCcEEeeeEEEEcCCCCcch-h
Q 010845 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLI-LNDGTEVPYGLLVWSTGVGPST-L 338 (499)
Q Consensus 268 ~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~-~~~g~~i~~D~vi~a~G~~p~~-~ 338 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ .|.+++.+ .|. +++|+ +++|.||+|+|++|+. +
T Consensus 194 ~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 194 VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 899999987 6889999999999999999999999998 89988753 466 77887 9999999999999995 3
Q ss_pred --cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 339 --VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 339 --~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
++.++++++++|+|.||+++|| +.|||||+|||+. .+++++.|..||+.+|+||..
T Consensus 273 l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 273 LGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD---------RVQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp SSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS---------SCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC---------CCCChHHHHHHHHHHHHHHcC
Confidence 6778999999999999999998 9999999999995 278899999999999999863
No 59
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.8e-35 Score=288.37 Aligned_cols=284 Identities=12% Similarity=0.149 Sum_probs=197.9
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccc-cch-hhhccccccCCCeEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA-EPI-ARIQPAISREPGSYFFL 137 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 137 (499)
|+++||+||||||||++||.+|++.|++|+|||++..-. . +.....+......+. ..+ ......+.+...+.+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRN-R--VTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE 80 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGG-G--GSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC-e--eeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe
Confidence 567899999999999999999999999999999874311 0 000001111111111 111 11122234445677777
Q ss_pred EEEEEEECCC-CEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC---ccCCCHHHHHHHHHHHHHH
Q 010845 138 SHCAGIDTDN-HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA---TFLREVHHAQEIRRKLLLN 213 (499)
Q Consensus 138 ~~v~~id~~~-~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~---~~~~~~~~~~~~~~~~~~~ 213 (499)
.++..++... ..+++...+ +.++.||+||||||++|+.|++||.++.. .......+.
T Consensus 81 ~~~~~~~~~~~~~~~v~~~~---------g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~---------- 141 (304)
T 4fk1_A 81 KTVVMITKQSTGLFEIVTKD---------HTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDG---------- 141 (304)
T ss_dssp CCEEEEEECTTSCEEEEETT---------CCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHS----------
T ss_pred eEEEEeeecCCCcEEEEECC---------CCEEEeCEEEEccCCccccccccCccccccceeeeccccch----------
Confidence 7777765433 233333211 24899999999999999999999975321 111111000
Q ss_pred HhhcCCCCCCHHHHhccccEEEeCcChH-HHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHH
Q 010845 214 LMLSDVPGISEEEKSRLLHCVVVGGGPT-GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATT 292 (499)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvVvGgG~~-gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~ 292 (499)
+ ..+.++++|||||.. ++|+|..+...+ .+|++++++..+ .+.+.+
T Consensus 142 ~------------~~~~~~~~VIggG~~~~~e~a~~~~~~~--------------~~v~i~~~~~~~-------~~~~~~ 188 (304)
T 4fk1_A 142 W------------ELKDQPLIIISENEDHTLHMTKLVYNWS--------------TDLVIATNGNEL-------SQTIMD 188 (304)
T ss_dssp G------------GGTTSCEEEECCSHHHHHHHHHHHTTTC--------------SCEEEECSSCCC-------CHHHHH
T ss_pred h------------HhcCCceeeecCCCchhhhHHHHHHhCC--------------ceEEEEeccccc-------hhhhhh
Confidence 0 012347888887765 577777776655 789999876422 234566
Q ss_pred HHHhCCCEEEeCceEEEeCC-----eEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCCCCCe
Q 010845 293 QLSKSGVRLVRGIVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366 (499)
Q Consensus 293 ~l~~~gV~v~~~~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~~~~I 366 (499)
.|++.|++++.+.+..+..+ .|.+++|+++++|.+|+++|..|+ +++++++++++++|+|.||+++|| +.|||
T Consensus 189 ~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~T-s~p~I 267 (304)
T 4fk1_A 189 ELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRT-SEKNI 267 (304)
T ss_dssp HHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBC-SSTTE
T ss_pred hhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCcc-CCCCE
Confidence 78889999998888777653 588999999999988888776665 788899999999999999999999 99999
Q ss_pred EEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 367 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 367 fa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
||+|||+.. .+.++..|+.||+.||.+|.+.|.
T Consensus 268 yA~GDv~~~--------~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 268 YLAGETTTQ--------GPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp EECSHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCC--------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999952 256788899999999999999886
No 60
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=5.8e-35 Score=302.49 Aligned_cols=287 Identities=20% Similarity=0.254 Sum_probs=209.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhh---------------------ccCC-----CCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTC---------------------VGTL-----EFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~---------------------~g~~-----~~~~ 115 (499)
++||+|||||+||+++|..|++.|++|+|||+++.+.....+.+.+ .... ....
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~ 82 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGE 82 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 5899999999999999999999999999999986221111000000 0000 0000
Q ss_pred cccc--------------hhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCC
Q 010845 116 VAEP--------------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE 181 (499)
Q Consensus 116 ~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~ 181 (499)
...+ +......+....++.++.+++..++... +.+...+ ++...+.||+||||||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~--~~v~~~~-------g~~~~~~~d~lvlAtG~~ 153 (476)
T 3lad_A 83 VAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKK--VEVTAAD-------GSSQVLDTENVILASGSK 153 (476)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTC--EEEECTT-------SCEEEECCSCEEECCCEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCE--EEEEcCC-------CceEEEEcCEEEEcCCCC
Confidence 0000 1000111222357888888888776544 4443211 113579999999999999
Q ss_pred ccCCCCCCccc-cCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHh
Q 010845 182 ASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (499)
Q Consensus 182 ~~~~~ipG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~ 260 (499)
|..|+.++.+. ..+ +..+. +.... ..++++|||+|++|+|+|..+...+
T Consensus 154 p~~~~~~~~~~~~v~---~~~~~----------~~~~~----------~~~~v~ViGgG~~g~e~A~~l~~~g------- 203 (476)
T 3lad_A 154 PVEIPPAPVDQDVIV---DSTGA----------LDFQN----------VPGKLGVIGAGVIGLELGSVWARLG------- 203 (476)
T ss_dssp ECCCTTSCCCSSSEE---EHHHH----------TSCSS----------CCSEEEEECCSHHHHHHHHHHHHTT-------
T ss_pred CCCCCCCCCCcccEE---echhh----------hcccc----------CCCeEEEECCCHHHHHHHHHHHHcC-------
Confidence 88665555322 222 11111 11122 2359999999999999999999887
Q ss_pred cCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCC---cEEeeeEEEEcC
Q 010845 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDG---TEVPYGLLVWST 331 (499)
Q Consensus 261 ~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g---~~i~~D~vi~a~ 331 (499)
.+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|.+++.+ .+.+.++ +++++|.||+|+
T Consensus 204 -------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~ 276 (476)
T 3lad_A 204 -------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAV 276 (476)
T ss_dssp -------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECS
T ss_pred -------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEee
Confidence 899999987 7899999999999999999999999999 89988743 3566654 689999999999
Q ss_pred CCCcch---hcccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 332 GVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 332 G~~p~~---~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
|++|+. .++..+++++++|+|.||+++|| +.|||||+|||+. . |.++..|..||+.+|+||..
T Consensus 277 G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~------~---~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 277 GRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVR------G---AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp CEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS------S---CCCHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCC------C---cccHHHHHHHHHHHHHHhcC
Confidence 999984 26778899999999999999998 9999999999994 1 67899999999999999864
No 61
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.4e-35 Score=303.72 Aligned_cols=282 Identities=22% Similarity=0.295 Sum_probs=212.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh---------------h-hccCC------CCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS---------------T-CVGTL------EFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~---------------~-~~g~~------~~~~ 115 (499)
++||+|||||+||+++|..|++.|++|+|||++ .+...... +. . ..|.. +...
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 579999999999999999999999999999994 32221100 00 0 00100 0000
Q ss_pred c-------ccchhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCcc-CCCC
Q 010845 116 V-------AEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFGI 187 (499)
Q Consensus 116 ~-------~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~-~~~i 187 (499)
+ ...+...........++.++.+++..++. +.+.+.. + ...+.||+||+|||+.|. .|.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~~--~--------~~~~~~d~lviAtG~~p~~~p~i 172 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELSV--T--------GERISAEKILIATGAKIVSNSAI 172 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEETT--T--------CCEEEEEEEEECCCEEECCC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEec--C--------CeEEEeCEEEEccCCCcccCCCC
Confidence 0 00111111112233578888888888874 4666641 1 147999999999999999 8999
Q ss_pred CCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 188 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
||.+ ..++..+. +..... .++++|||+|++|+|+|..+.+.+
T Consensus 173 ~G~~-~~~~~~~~-------------~~~~~~----------~~~v~ViGgG~~g~e~A~~l~~~g-------------- 214 (484)
T 3o0h_A 173 KGSD-LCLTSNEI-------------FDLEKL----------PKSIVIVGGGYIGVEFANIFHGLG-------------- 214 (484)
T ss_dssp BTGG-GSBCTTTG-------------GGCSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-ccccHHHH-------------HhHHhc----------CCcEEEECcCHHHHHHHHHHHHcC--------------
Confidence 9974 33332222 111122 359999999999999999999877
Q ss_pred eEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcch-h--
Q 010845 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L-- 338 (499)
Q Consensus 268 ~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~-~-- 338 (499)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.+++|+++++|.||+|+|++|+. +
T Consensus 215 ~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~ 294 (484)
T 3o0h_A 215 VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLG 294 (484)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCC
T ss_pred CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCC
Confidence 899999987 6889999999999999999999999998 89998764 5788899999999999999999995 3
Q ss_pred cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 339 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 339 ~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
++..+++++++|+|.||+++|| +.|+|||+|||+. .+++++.|..||+.+|+||..
T Consensus 295 l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 295 LERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG---------HIQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp HHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT---------SCCCHHHHHHHHHHHHHHHHC
T ss_pred hhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC---------CCcCHHHHHHHHHHHHHHHcC
Confidence 5677899999999999999998 9999999999994 278899999999999999874
No 62
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=9.7e-37 Score=312.02 Aligned_cols=343 Identities=16% Similarity=0.144 Sum_probs=222.1
Q ss_pred ccccccccccc--ccccCCCCCCC-CCccceecccCCCccCCCCCCccccccCCCCCCCCCCCCcEEEECCchHHHHHHH
Q 010845 3 LFKHLLRNPTA--KSYSYSSPSII-MPSNLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMK 79 (499)
Q Consensus 3 ~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~ 79 (499)
|+.-++|+|.+ +|+..|.+... ..| ..+..+.+|..+..... ...+...+ .....++|+|||||+|||++|.
T Consensus 65 ~p~~~grvCp~~~~Ce~~C~~~~~~~~~-v~I~~le~~~~~~~~~~---~~~~~~~~-~~~~~~~V~IIGgGpAGl~aA~ 139 (456)
T 2vdc_G 65 FPEICGRICPQDRLCEGNCVIEQSTHGA-VTIGSVEKYINDTAWDQ---GWVKPRTP-SRELGLSVGVIGAGPAGLAAAE 139 (456)
T ss_dssp CHHHHHHHCCGGGSGGGGCGGGGSSSCS-CCHHHHHHHHHHHHHHH---TCCCCCCS-CSSCCCCEEEECCSHHHHHHHH
T ss_pred CCccccccCCCCcchHHhcccCCCCCCC-ccHHHHHHHHHHHHHHc---CCCCCCCC-cCCCCCEEEEECCCHHHHHHHH
Confidence 45567899999 99999999886 444 56665666543211000 01111111 1134579999999999999999
Q ss_pred hccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEEEEEEECCCCEEEEeeecCcc
Q 010845 80 GIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDEL 159 (499)
Q Consensus 80 ~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~ 159 (499)
.|++.|++|+|||+.+.+..... +.. .+...+.++.....+. +. ..++.++.++.+. +.+++++
T Consensus 140 ~L~~~G~~V~v~e~~~~~GG~l~-~gi-p~~~~~~~~~~~~~~~---l~-~~gv~~~~~~~v~-----~~v~~~~----- 203 (456)
T 2vdc_G 140 ELRAKGYEVHVYDRYDRMGGLLV-YGI-PGFKLEKSVVERRVKL---LA-DAGVIYHPNFEVG-----RDASLPE----- 203 (456)
T ss_dssp HHHHHTCCEEEECSSSSCSTHHH-HTS-CTTTSCHHHHHHHHHH---HH-HTTCEEETTCCBT-----TTBCHHH-----
T ss_pred HHHHCCCeEEEEeccCCCCCeee-ecC-CCccCCHHHHHHHHHH---HH-HCCcEEEeCCEec-----cEEEhhH-----
Confidence 99999999999999876543211 111 0110111111111111 22 2466665543221 1222221
Q ss_pred ccCCCceeeeeCCeEEEcCCCC-ccCCCCCCccc-cCccCCCHHHHHHHHHHHHHHHhhcCCCCCCH-HHHhccccEEEe
Q 010845 160 RTLEPWKFKISYDKLVIALGAE-ASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISE-EEKSRLLHCVVV 236 (499)
Q Consensus 160 ~~~~~~~~~i~yd~LViAtG~~-~~~~~ipG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~vvVv 236 (499)
..+.||+||||||+. ++.+++||.+. .++. ..+...-.... .+... .+..+. ......++|+||
T Consensus 204 -------~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~---a~~~l~~~~~~--~~~~~-~~~~~~g~~~~~gk~VvVI 270 (456)
T 2vdc_G 204 -------LRRKHVAVLVATGVYKARDIKAPGSGLGNIVA---ALDYLTTSNKV--SLGDT-VEAYENGSLNAAGKHVVVL 270 (456)
T ss_dssp -------HHSSCSEEEECCCCCEECCTTCSCCTTTTEEE---HHHHHHHHHHH--HCTTT-CSSCCTTCSCCCCSEEEEE
T ss_pred -------hHhhCCEEEEecCCCCCCCCCCCCCcCCCcEE---HHHHHHHhhhh--hcccc-cccccccccccCCCEEEEE
Confidence 246799999999996 67788998742 2221 11111111110 01100 000000 011345799999
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-Cc-CCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCe
Q 010845 237 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQK 313 (499)
Q Consensus 237 GgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~-l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~ 313 (499)
|||++|+|+|..+.+.+. .+|+++++. .. +|..+.+ .+.+++.||+++.+ .+.++.+++
T Consensus 271 GgG~~a~d~A~~~~r~Ga-------------~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g 332 (456)
T 2vdc_G 271 GGGDTAMDCVRTAIRQGA-------------TSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTGDT 332 (456)
T ss_dssp CSSHHHHHHHHHHHHTTC-------------SEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEEEE
T ss_pred CCChhHHHHHHHHHHcCC-------------CEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeCCC
Confidence 999999999999887761 369999987 33 5655443 34577789999988 666664331
Q ss_pred ----EEEC------------------CC--cEEeeeEEEEcCCCCcch---hcccCCCCCCCCCceeeCCC-CCCCCCCC
Q 010845 314 ----LILN------------------DG--TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEW-LRVPSVQD 365 (499)
Q Consensus 314 ----v~~~------------------~g--~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~vd~~-l~~~~~~~ 365 (499)
|++. +| .++++|+||+|+|+.|++ ++..++++++++|+|.||++ +|| +.|+
T Consensus 333 ~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~T-s~~~ 411 (456)
T 2vdc_G 333 VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMT-NMDG 411 (456)
T ss_dssp EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBC-SSTT
T ss_pred cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcC-CCCC
Confidence 2221 23 479999999999999974 67888999999999999997 998 9999
Q ss_pred eEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 366 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 366 Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|||+|||+. + +.++..|++||+.+|++|...+.
T Consensus 412 VfA~GD~~~-----g----~~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 412 VFAAGDIVR-----G----ASLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp EEECGGGGS-----S----CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccC-----C----chHHHHHHHHHHHHHHHHHHHhh
Confidence 999999985 2 67899999999999999999886
No 63
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.2e-35 Score=291.01 Aligned_cols=286 Identities=13% Similarity=0.124 Sum_probs=207.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc--hhhhh-ccCCCCCcc-ccchhhhccccccCCCeEEE-
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LASTC-VGTLEFRSV-AEPIARIQPAISREPGSYFF- 136 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~--~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 136 (499)
+++|+|||||+||+++|..|++.|++|+|||+++.+..... .+... ......... ...+...........++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 47999999999999999999999999999999986542221 00000 000111100 11122221112233466766
Q ss_pred EEEEEEEECCCC-EEEEeeecCccccCCCceeeeeCCeEEEcCCC---CccCCCCCCcccc---CccCCCHHHHHHHHHH
Q 010845 137 LSHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKEN---ATFLREVHHAQEIRRK 209 (499)
Q Consensus 137 ~~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~---~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~ 209 (499)
..+|+.++.+.+ .+.+... + .++.||+||+|||+ .|..|++||.+.. .... .+.+.
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~-~---------g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~------ 149 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTN-E---------ETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDL------ 149 (332)
T ss_dssp SCCEEEEEECTTSCEEEEES-S---------EEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCG------
T ss_pred cCEEEEEEECCCCcEEEEEC-C---------CEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCH------
Confidence 479999998876 3333321 1 25999999999999 8888899997541 1111 11111
Q ss_pred HHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHH
Q 010845 210 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY 289 (499)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~ 289 (499)
...+.++++|||+|.+|+|+|..|.+.+ .+|+++++...+...++
T Consensus 150 ----------------~~~~~~~v~vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~~~----- 194 (332)
T 3lzw_A 150 ----------------QKFAGRRVAILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAHEH----- 194 (332)
T ss_dssp ----------------GGGBTCEEEEECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSCHH-----
T ss_pred ----------------HHcCCCEEEEECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCccHH-----
Confidence 1123469999999999999999998765 89999998743333322
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCCe----EEECC-----CcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCC
Q 010845 290 ATTQLSKSGVRLVRG-IVKDVDSQK----LILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWL 358 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~-~v~~v~~~~----v~~~~-----g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l 358 (499)
..+.|++.||+++.+ .|.+++.+. +++++ ++++++|.||+|+|+.|+ ++++.++++. ++|+|.||+++
T Consensus 195 ~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~ 273 (332)
T 3lzw_A 195 SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTM 273 (332)
T ss_dssp HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTS
T ss_pred HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCC
Confidence 234578899999998 899998753 77765 467999999999999998 6888888887 67999999999
Q ss_pred CCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 359 ~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|+ +.|||||+|||+.++ ..++++..|..||+.+|.+|...+.
T Consensus 274 ~t-~~~~vya~GD~~~~~------~~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 274 ET-NIEGFFAAGDICTYE------GKVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp BC-SSTTEEECGGGEECT------TCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ce-ecCCEEEccceecCC------CCcceEeeehhhHHHHHHHHHHhhC
Confidence 99 999999999999642 1388899999999999999999886
No 64
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.5e-35 Score=300.28 Aligned_cols=277 Identities=24% Similarity=0.319 Sum_probs=206.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccc----hh-----------h----hh----ccCCCCCcccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------S----TC----VGTLEFRSVAE 118 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~----~~-----------~----~~----~g~~~~~~~~~ 118 (499)
+++|+|||||+||+++|..|++.|++|+|||++ .+..... .+ . .. .|. .......
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~-~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGI-SVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCc-ccCCCcc
Confidence 479999999999999999999999999999994 3321100 00 0 00 111 1111111
Q ss_pred chhhhc--------------cccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 119 PIARIQ--------------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 119 ~~~~~~--------------~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
++..+. ..+....+++++.+++..++ .+.|.+++ .++.||+||||||+.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~~------------~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQVEVDG------------QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTEEEETT------------EEEECSEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCEEEEee------------EEEEeCEEEEeCCCCCCC
Confidence 111110 11223367888887776665 46676643 379999999999999876
Q ss_pred CC-CCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCC
Q 010845 185 FG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (499)
Q Consensus 185 ~~-ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~ 263 (499)
|+ +| .+. .+.+..++. .... ..++++|||||++|+|+|..|++.+
T Consensus 149 ~~~~~-~~~---~v~~~~~~~----------~~~~----------~~~~vvViGgG~~g~e~A~~l~~~g---------- 194 (458)
T 1lvl_A 149 LPMLP-LGG---PVISSTEAL----------APKA----------LPQHLVVVGGGYIGLELGIAYRKLG---------- 194 (458)
T ss_dssp BTTBC-CBT---TEECHHHHT----------CCSS----------CCSEEEEECCSHHHHHHHHHHHHHT----------
T ss_pred CCCCC-ccC---cEecHHHHh----------hhhc----------cCCeEEEECcCHHHHHHHHHHHHCC----------
Confidence 65 55 222 122333221 1111 2359999999999999999999887
Q ss_pred CCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEEC--CC--cEEeeeEEEEcCCCCcch
Q 010845 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DG--TEVPYGLLVWSTGVGPST 337 (499)
Q Consensus 264 ~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~--~g--~~i~~D~vi~a~G~~p~~ 337 (499)
.+|+++++. ++++.+++++.+.+.+.+++.||+++++ +|.+++.+.+.+. +| +++++|.||+|+|.+|+.
T Consensus 195 ----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 195 ----AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ----CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ----CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 899999987 7889999999999999999999999999 8999986545554 56 689999999999999994
Q ss_pred -h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 338 -L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 338 -~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+ ++.++++++++ +|.||+++|| +.|+|||+|||+.. +++++.|.+||+.+|.||.
T Consensus 271 ~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 271 KGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE---------PMLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp SSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS---------SCCHHHHHHHHHHHHHHHT
T ss_pred CCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC---------cccHHHHHHHHHHHHHHhc
Confidence 3 57778888777 8999999998 89999999999952 6788999999999999986
No 65
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=4.6e-35 Score=287.35 Aligned_cols=289 Identities=18% Similarity=0.167 Sum_probs=206.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCC-Cccc-cchhhhccccccCCCeEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEF-RSVA-EPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
+++|+|||||+||+++|..|++.|++|+|||+.. ................. ..+. ..+...........++.++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 4789999999999999999999999999999752 11110000000000000 0000 1111111112223567888888
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC-ccCCCHHHHHHHHHHHHHHHhhcC
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLSD 218 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 218 (499)
|+.++.+.+.+++ . .++ ..+.||+||+|||+.+..|++||.++.. ..+..... ....
T Consensus 84 v~~i~~~~~~~~v-~-~~~--------~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~--------- 141 (320)
T 1trb_A 84 INKVDLQNRPFRL-N-GDN--------GEYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGF--------- 141 (320)
T ss_dssp EEEEECSSSSEEE-E-ESS--------CEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGG---------
T ss_pred eeEEEecCCEEEE-E-eCC--------CEEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCcc---------
Confidence 9999988776665 2 112 3789999999999999888888864321 01111110 0000
Q ss_pred CCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCC
Q 010845 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (499)
Q Consensus 219 ~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~g 298 (499)
....++|+|||+|++|+|+|..|.+.+ .+|+++++...+. .++.+.+.+.+.+++.|
T Consensus 142 --------~~~~~~v~ViG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~~~~l~~~l~~~g 198 (320)
T 1trb_A 142 --------FYRNQKVAVIGGGNTAVEEALYLSNIA--------------SEVHLIHRRDGFR-AEKILIKRLMDKVENGN 198 (320)
T ss_dssp --------GGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC-CCHHHHHHHHHHHHTSS
T ss_pred --------ccCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCccc-cCHHHHHHHHHhcccCC
Confidence 022359999999999999999998776 8999999874332 36778888889999999
Q ss_pred CEEEeC-ceEEEeCCe-----EEECC----C--cEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCCC-----CC
Q 010845 299 VRLVRG-IVKDVDSQK-----LILND----G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL-----RV 360 (499)
Q Consensus 299 V~v~~~-~v~~v~~~~-----v~~~~----g--~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~l-----~~ 360 (499)
|+++++ +|.+++.+. |++++ | +++++|.||+|+|++|+. ++. .+++.+ +|+|.||+++ ++
T Consensus 199 v~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~~t 276 (320)
T 1trb_A 199 IILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNATQT 276 (320)
T ss_dssp EEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTTBC
T ss_pred eEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccccC
Confidence 999999 899987543 77764 4 579999999999999995 544 567778 8999999997 56
Q ss_pred CCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 361 PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 361 ~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+.|+|||+|||+.. .++.+..|..||+.+|.+|...+.
T Consensus 277 -~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 314 (320)
T 1trb_A 277 -SIPGVFAAGDVMDH--------IYRQAITSAGTGCMAALDAERYLD 314 (320)
T ss_dssp -SSTTEEECGGGGCS--------SSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCEEEcccccCC--------cchhhhhhhccHHHHHHHHHHHHH
Confidence 89999999999952 256789999999999999999886
No 66
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.9e-35 Score=304.27 Aligned_cols=283 Identities=21% Similarity=0.235 Sum_probs=210.4
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh------------hh---ccCCCCCccccchhhh
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS------------TC---VGTLEFRSVAEPIARI 123 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~------------~~---~g~~~~~~~~~~~~~~ 123 (499)
++|+|||||+||+++|..|++.|++|+|||+++.+...... +. .. .|. .......++..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~ 80 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGA-KVKGVELDLPAL 80 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTE-EECCEEECHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCc-ccCCCccCHHHH
Confidence 68999999999999999999999999999998765322110 00 00 000 000000111110
Q ss_pred --------------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCC
Q 010845 124 --------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHG 189 (499)
Q Consensus 124 --------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG 189 (499)
...+....+++++.+++..++ .+.+.+.. ++ .++.||+||+|||+.|..|+++|
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~--~~~~~v~~--~g--------~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLS--ERKVLVEE--TG--------EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETT--TC--------CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCeEEEee--CC--------EEEEecEEEECCCCCCCCCCCCC
Confidence 011122246788887766554 45666543 12 37999999999999999888888
Q ss_pred ccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceE
Q 010845 190 VKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (499)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~ 269 (499)
.+... +.+..++. .... ..++|+|||||++|+|+|..|.+.+ .+
T Consensus 149 ~~~~~--v~~~~~~~----------~~~~----------~~~~vvIiGgG~~g~e~A~~l~~~g--------------~~ 192 (455)
T 2yqu_A 149 VDYER--VVTSTEAL----------SFPE----------VPKRLIVVGGGVIGLELGVVWHRLG--------------AE 192 (455)
T ss_dssp CCSSS--EECHHHHT----------CCSS----------CCSEEEEECCSHHHHHHHHHHHHTT--------------CE
T ss_pred CCcCc--EechHHhh----------cccc----------CCCeEEEECCCHHHHHHHHHHHHcC--------------CE
Confidence 64311 22222221 1111 2359999999999999999999877 89
Q ss_pred EEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce--EEECCCcEEeeeEEEEcCCCCcch-h--cc
Q 010845 270 VTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPST-L--VK 340 (499)
Q Consensus 270 Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~--v~~~~g~~i~~D~vi~a~G~~p~~-~--~~ 340 (499)
|+++++. .++|.+++++.+.+.+.+++.||+++++ +|.+++. +. +.+++|+++++|.||+|+|.+|+. + ++
T Consensus 193 V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~ 272 (455)
T 2yqu_A 193 VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLE 272 (455)
T ss_dssp EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGG
T ss_pred EEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChh
Confidence 9999987 6889999999999999999999999999 8998864 33 455688899999999999999984 4 56
Q ss_pred cCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010845 341 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 341 ~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~ 404 (499)
.++++++++|+|.||+++|+ +.|+|||+|||+.. +++++.|.+||+.+|+||..
T Consensus 273 ~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 273 NAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG---------PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp GGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC---------ccCHHHHHHhHHHHHHHHcC
Confidence 77888888899999999998 89999999999951 67889999999999999974
No 67
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.4e-35 Score=285.02 Aligned_cols=282 Identities=16% Similarity=0.144 Sum_probs=185.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccc-cch-hhhccccccCCCeEEEE-E
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA-EPI-ARIQPAISREPGSYFFL-S 138 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-~ 138 (499)
.+||+||||||||++||.+|++.|++|+|||++.. ..+-.......+.+....+. ..+ ........+ ....+.. .
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 83 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKK-FGAVYQYGD 83 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhh-cccccccee
Confidence 48999999999999999999999999999998632 11110000000111111110 011 111111222 2233333 2
Q ss_pred EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC---ccCCCHHHHHHHHHHHHHHHh
Q 010845 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA---TFLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~---~~~~~~~~~~~~~~~~~~~~~ 215 (499)
.+...+.....+...+ ..++.||+||||||++|+.|++||.++.. .......+..
T Consensus 84 ~~~~~~~~~~~~~~~~-----------~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~----------- 141 (312)
T 4gcm_A 84 IKSVEDKGEYKVINFG-----------NKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA----------- 141 (312)
T ss_dssp CCEEEECSSCEEEECS-----------SCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG-----------
T ss_pred eeeeeeeecceeeccC-----------CeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCcc-----------
Confidence 3344444444443322 24899999999999999999999985421 1111111100
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHH
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQL 294 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l 294 (499)
..+.++|+|||||++|+|+|..|++++ .+||++++. ++++.. ....+.+
T Consensus 142 -----------~~~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~-----~~~~~~~ 191 (312)
T 4gcm_A 142 -----------FFKNKRLFVIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQR-----ILQDRAF 191 (312)
T ss_dssp -----------GGTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCH-----HHHHHHH
T ss_pred -----------ccCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcch-----hHHHHHH
Confidence 112369999999999999999998877 899999987 555431 1223456
Q ss_pred HhCCCEEEeC-ceEEEe--CC---e--EE-E--CCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCC
Q 010845 295 SKSGVRLVRG-IVKDVD--SQ---K--LI-L--NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPS 362 (499)
Q Consensus 295 ~~~gV~v~~~-~v~~v~--~~---~--v~-~--~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~ 362 (499)
++.++..... .+..+. +. . .. . .++..+++|.|++++|..|+ .+...+++. +++|+|.||++||| +
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~T-s 269 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMTT-S 269 (312)
T ss_dssp HCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCB-CTTSCBCCCTTSBC-S
T ss_pred HhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhccee-cCCCeEeeCCCCcc-C
Confidence 6778877765 333222 11 1 11 1 23357999999999999999 466666764 56799999999999 9
Q ss_pred CCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 363 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 363 ~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.|||||+|||+.. .++++..|+.||+.||.||.++++
T Consensus 270 ~pgIyA~GDv~~~--------~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 270 VPGIFAAGDVRDK--------GLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp STTEEECSTTBSC--------SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCC--------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999941 257889999999999999999886
No 68
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.9e-34 Score=305.31 Aligned_cols=288 Identities=19% Similarity=0.261 Sum_probs=207.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCC-CC-------cccc----cchhhh----------------hccCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NH-------MVFT----PLLAST----------------CVGTLE 112 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~-~~-------~~~~----~~~~~~----------------~~g~~~ 112 (499)
.+++|+|||||+||++||..|++.|++|+|||+. +. +... ...+.. ..|...
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 4579999999999999999999999999999973 21 1110 000000 001100
Q ss_pred CCc-cccc-------hhhhc--------cccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEE
Q 010845 113 FRS-VAEP-------IARIQ--------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176 (499)
Q Consensus 113 ~~~-~~~~-------~~~~~--------~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LVi 176 (499)
... ...+ ++... ..+ ...++.++.+.+..++.. .+.+... ++ +..++.||+|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~~~~~~~~--~v~v~~~-~g------~~~~~~~d~lvi 255 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVAL-RDNQVTYLNAKGRLISPH--EVQITDK-NQ------KVSTITGNKIIL 255 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEECSEEEEEETT--EEEEECT-TC------CEEEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEEEEEEcCCC--EEEEEeC-CC------CeEEEEeCEEEE
Confidence 000 1111 11110 011 225788888787777754 4554431 11 124789999999
Q ss_pred cCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHH
Q 010845 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 256 (499)
Q Consensus 177 AtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~ 256 (499)
|||+.|+.|++||.+++..+ ..+. +..... .++|+|||||++|+|+|..|++++
T Consensus 256 AtGs~p~~p~i~G~~~~~~~---~~~~----------~~~~~~----------~~~vvViGgG~~g~E~A~~l~~~g--- 309 (598)
T 2x8g_A 256 ATGERPKYPEIPGAVEYGIT---SDDL----------FSLPYF----------PGKTLVIGASYVALECAGFLASLG--- 309 (598)
T ss_dssp CCCEEECCCSSTTHHHHCEE---HHHH----------TTCSSC----------CCSEEEECCSHHHHHHHHHHHHTT---
T ss_pred eCCCCCCCCCCCCcccceEc---HHHH----------hhCccC----------CCEEEEECCCHHHHHHHHHHHHcC---
Confidence 99999999999997543321 1111 111122 248999999999999999999887
Q ss_pred HHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEe--------C---CeEE----ECCCc
Q 010845 257 VRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVD--------S---QKLI----LNDGT 320 (499)
Q Consensus 257 ~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~--------~---~~v~----~~~g~ 320 (499)
.+||++++..+++.+++++.+.+.+.|++.||+++++ .+.+++ + +.+. +.+|+
T Consensus 310 -----------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~ 378 (598)
T 2x8g_A 310 -----------GDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGK 378 (598)
T ss_dssp -----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSC
T ss_pred -----------CEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCc
Confidence 8999999888888999999999999999999999998 666663 2 3332 35777
Q ss_pred EEe--eeEEEEcCCCCcch-h--cccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHH
Q 010845 321 EVP--YGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 395 (499)
Q Consensus 321 ~i~--~D~vi~a~G~~p~~-~--~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g 395 (499)
+++ +|.||+|+|++|+. + ++..+++++++|+|.||+++|| +.|+|||+|||+. +. +.+++.|.+||
T Consensus 379 ~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~-----~~---~~~~~~A~~~g 449 (598)
T 2x8g_A 379 KFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINA-----GK---PQLTPVAIQAG 449 (598)
T ss_dssp EEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBT-----TS---CCCHHHHHHHH
T ss_pred EEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecC-----CC---CccHHHHHHhH
Confidence 655 99999999999994 4 4677898988999999999998 9999999999974 22 67899999999
Q ss_pred HHHHHHHHH
Q 010845 396 KYLFSLLNR 404 (499)
Q Consensus 396 ~~aa~~i~~ 404 (499)
+.+|.||..
T Consensus 450 ~~aa~~i~~ 458 (598)
T 2x8g_A 450 RYLARRLFA 458 (598)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999864
No 69
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3.7e-34 Score=279.67 Aligned_cols=284 Identities=18% Similarity=0.169 Sum_probs=198.8
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc--cchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-E
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (499)
++|+|||||+||+++|..|++.|++|+|||+...-.+. +.+.... +. .......+...........++.++.+ +
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYI-SV--PKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBT-TB--SSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceecccccccccc-Cc--CCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 68999999999999999999999999999875211100 0000000 00 00000112222111223357888777 8
Q ss_pred EEEEECCCC---EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCc-cCCCHHHHHHHHHHHHHHHh
Q 010845 140 CAGIDTDNH---VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENAT-FLREVHHAQEIRRKLLLNLM 215 (499)
Q Consensus 140 v~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~-~~~~~~~~~~~~~~~~~~~~ 215 (499)
|+.++.+.+ .+.+... ++ .++.||+||+|||+.|..|++||.+++.. .+.... .+..
T Consensus 79 v~~i~~~~~~~~~~~v~~~-~g--------~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~------- 139 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETA-SG--------AVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCP---HCDG------- 139 (310)
T ss_dssp EEEEECCSSTTCCEEEEET-TS--------CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH---HHHG-------
T ss_pred EEEEEecccCCceEEEEEC-CC--------CEEEeCEEEECcCCCcCCCCCCChhhcccceeEEec---cCcH-------
Confidence 999987532 3333221 12 37899999999999998889999754210 011111 1100
Q ss_pred hcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHH
Q 010845 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (499)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~ 295 (499)
.....++|+|||+|++|+|+|..|...+ .+|+++++.+.+. +++ .+.+.|+
T Consensus 140 ----------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~----~~~~~l~ 190 (310)
T 1fl2_A 140 ----------PLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMK-ADQ----VLQDKLR 190 (310)
T ss_dssp ----------GGGBTCEEEEECCSHHHHHHHHHHHTTB--------------SEEEEECSSSSCC-SCH----HHHHHHH
T ss_pred ----------hhcCCCEEEEECCCHHHHHHHHHHHHhC--------------CEEEEEEeCcccC-ccH----HHHHHHh
Confidence 0123469999999999999999998766 8999999874332 333 3455666
Q ss_pred h-CCCEEEeC-ceEEEeCC-----eEEECC---Cc--EEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCCCCCCC
Q 010845 296 K-SGVRLVRG-IVKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPS 362 (499)
Q Consensus 296 ~-~gV~v~~~-~v~~v~~~-----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~l~~~~ 362 (499)
+ .||+++++ ++.+++.+ ++++.+ |+ ++++|.||+|+|++|+ +++... ++++++|+|.||+++|+ +
T Consensus 191 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t-~ 268 (310)
T 1fl2_A 191 SLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCET-N 268 (310)
T ss_dssp TCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-S
T ss_pred hCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCcc-C
Confidence 6 69999999 89998754 466653 53 7899999999999998 566653 77788899999999997 9
Q ss_pred CCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 363 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 363 ~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.|+|||+|||+.. .++++..|+.||+.+|.+|...+.
T Consensus 269 ~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 269 VKGVFAAGDCTTV--------PYKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp STTEEECSTTBSC--------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCC--------cchhhhhhHhhHHHHHHHHHHHHH
Confidence 9999999999962 146788999999999999999886
No 70
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.1e-34 Score=283.86 Aligned_cols=292 Identities=17% Similarity=0.154 Sum_probs=193.3
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccccc--chhhh--hccCCCC-Cccc-cchhhhccccccCCCeE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP--LLAST--CVGTLEF-RSVA-EPIARIQPAISREPGSY 134 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~--~~~~~--~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~ 134 (499)
+++||+||||||||++||.+|++.|++|+|||++......+ .++.. ..+.+.. +.+. ..+...........+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 35899999999999999999999999999999875321111 01000 0000000 1010 11111111112224556
Q ss_pred EEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC-ccCCCHHHHHHHHHHHHHH
Q 010845 135 FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLN 213 (499)
Q Consensus 135 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~~~~~~~~~~~~ 213 (499)
+...++..+....+.......+ ..++.||+||||||+.|+.|++||.+... ............
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~------- 146 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEE---------GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGA------- 146 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETT---------CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTT-------
T ss_pred EEEeEEEEeecCCCceEEEECC---------CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhh-------
Confidence 6666777777666544433311 25899999999999999999999985321 111111111100
Q ss_pred HhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHH
Q 010845 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293 (499)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~ 293 (499)
....+.++++|||||++|+|+|..|++++ .+||++++..... ..+. ...+.
T Consensus 147 -----------~~~~~~~~vvViGgG~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~-~~~~---~~~~~ 197 (314)
T 4a5l_A 147 -----------VPIFRNKVLMVVGGGDAAMEEALHLTKYG--------------SKVIILHRRDAFR-ASKT---MQERV 197 (314)
T ss_dssp -----------SGGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC-SCHH---HHHHH
T ss_pred -----------hhhcCCCeEEEECCChHHHHHHHHHHHhC--------------Ceeeeeccccccc-ccch---hhhhh
Confidence 01123469999999999999999999887 8999999863221 1222 23344
Q ss_pred HHhCCCEEEeC-ceEEEeCC-----eEEE-----CCCcEEeeeEEEEcCCCCcchhcccCCCCCCCCCceeeCCCCCCCC
Q 010845 294 LSKSGVRLVRG-IVKDVDSQ-----KLIL-----NDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPS 362 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~-----~v~~-----~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~l~~~~ 362 (499)
+...+++.+.. .+.++... ++.+ .+++++++|.|++++|.+|+.-+....+..+++|.+ ||+++|| +
T Consensus 198 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~i-v~~~~~T-s 275 (314)
T 4a5l_A 198 LNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYI-LTEGPKT-S 275 (314)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCB-CCBTTBC-S
T ss_pred hcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeE-eCCCCcc-C
Confidence 56667888776 55555432 3333 245689999999999999995333445777888866 8889999 9
Q ss_pred CCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 363 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 363 ~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.|||||+|||+.. ..+++..|+.||+.||.++.++++
T Consensus 276 ~pgIyA~GDv~~~--------~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 276 VDGVFACGDVCDR--------VYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp STTEEECSTTTCS--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeccCC--------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999952 145788899999999999999886
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=6.7e-34 Score=283.96 Aligned_cols=288 Identities=15% Similarity=0.148 Sum_probs=206.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch--hhh-hccCCCCCcc-ccchh-hhccccccCCCeEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL--AST-CVGTLEFRSV-AEPIA-RIQPAISREPGSYF 135 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~--~~~-~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 135 (499)
.+++|+|||||+||+++|..|++.|++|+|||+++.+...... +.. .........+ ...+. .+...+. ..++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~ 91 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAE-RYNPDV 91 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHH-TTCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHH-HhCCEE
Confidence 3579999999999999999999999999999998765332110 000 0000000000 01111 1111122 245555
Q ss_pred EE-EEEEEEECCCC-EEEEeeecCccccCCCceeeeeCCeEEEcCCC---CccCCCCCC-ccccC---c--cCCCHHHHH
Q 010845 136 FL-SHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHG-VKENA---T--FLREVHHAQ 204 (499)
Q Consensus 136 ~~-~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~---~~~~~~ipG-~~~~~---~--~~~~~~~~~ 204 (499)
+. .+|+.++.+.+ .+.+... ++ .++.||+||+|||+ .|..+++|| .++.. + .+++..
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~-~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~--- 159 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTN-TG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE--- 159 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEET-TS--------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG---
T ss_pred EcCCEEEEEEECCCceEEEEEC-CC--------cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH---
Confidence 44 58889987654 4444331 11 37999999999998 566667777 53211 1 111110
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCC
Q 010845 205 EIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFD 283 (499)
Q Consensus 205 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~ 283 (499)
....++|+|||+|++|+|+|..|.+.+ .+|+++++.. +++ .
T Consensus 160 ----------------------~~~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~-~- 201 (360)
T 3ab1_A 160 ----------------------DFKGKRVVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQG-H- 201 (360)
T ss_dssp ----------------------GGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSS-C-
T ss_pred ----------------------HcCCCcEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCC-C-
Confidence 112359999999999999999998765 8999999874 433 2
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEEC--CC--cEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCce
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN--DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRI 352 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~--~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i 352 (499)
+.+.+.+.+.+++.||+++.+ +|.+++.+ +|.+. +| +++++|.||+|+|+.|+ ++++.++++.+ +|+|
T Consensus 202 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i 280 (360)
T 3ab1_A 202 GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENAL 280 (360)
T ss_dssp SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEE
T ss_pred HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCee
Confidence 356677788888999999999 89888753 57774 77 57999999999999998 58888888877 7899
Q ss_pred eeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 353 GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 353 ~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.||+++|| +.|+|||+|||+..+. .++++..|..||..+|+||...+.
T Consensus 281 ~vd~~~~t-~~~~vya~GD~~~~~~------~~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 281 VVDSHMKT-SVDGLYAAGDIAYYPG------KLKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp ECCTTSBC-SSTTEEECSTTEECTT------CCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred eecCCCcC-CCCCEEEecCccCCCC------ccceeehhHHHHHHHHHHHHhhcC
Confidence 99999998 9999999999997431 378899999999999999998875
No 72
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=4.8e-34 Score=296.15 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=205.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch----hh-----------hh---c--cC------CCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS-----------TC---V--GT------LEFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~----~~-----------~~---~--g~------~~~~~ 115 (499)
+++|+|||||+||+++|..|++.|++|+|||+++ +..+... +. .. . |. .+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 3799999999999999999999999999999975 2221100 00 00 0 00 01111
Q ss_pred cccchhhh--------ccccccCCCeEEEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCC
Q 010845 116 VAEPIARI--------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (499)
Q Consensus 116 ~~~~~~~~--------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~i 187 (499)
+...+... ...+.....+.++.++...++ .+.|.+.+ ..++.||+||||||+.|..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~~~v~~~~-----------~~~~~~d~lViATGs~p~~p~~ 153 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--EHTLQVDD-----------HSQVIAKRIVIATGSRPNYPEF 153 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--TTEEEETT-----------TEEEEEEEEEECCCEECCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--CCEEEEcC-----------CcEEEeCEEEEccCCCCcCCCC
Confidence 11111110 011111123345566555554 35666633 2489999999999999988876
Q ss_pred CCcc-ccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010845 188 HGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (499)
Q Consensus 188 pG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~ 266 (499)
+|.. +..+ +..+. +..... .++|+|||||++|+|+|..|.+++
T Consensus 154 ~~~~~~~v~---t~~~~----------~~~~~~----------~k~vvViGgG~ig~E~A~~l~~~g------------- 197 (492)
T 3ic9_A 154 LAAAGSRLL---TNDNL----------FELNDL----------PKSVAVFGPGVIGLELGQALSRLG------------- 197 (492)
T ss_dssp HHTTGGGEE---CHHHH----------TTCSSC----------CSEEEEESSCHHHHHHHHHHHHTT-------------
T ss_pred CCccCCcEE---cHHHH----------hhhhhc----------CCeEEEECCCHHHHHHHHHHHHcC-------------
Confidence 6532 2222 22221 122222 359999999999999999999987
Q ss_pred ceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e--EEEC--CC--cEEeeeEEEEcCCCCcc
Q 010845 267 YIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILN--DG--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 267 ~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~--~--v~~~--~g--~~i~~D~vi~a~G~~p~ 336 (499)
.+|+++++. ++++.+++++.+.+.+.|++. |+++++ +|.+++.+ . +.+. +| +++++|.||+|+|++|+
T Consensus 198 -~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 198 -VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp -CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred -CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 899999987 688999999999999999998 999999 89888643 3 4443 67 68999999999999999
Q ss_pred h-h--cccCCCCCCCCCceeeC-CCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010845 337 T-L--VKSLDLPKSPGGRIGID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 405 (499)
Q Consensus 337 ~-~--~~~~~l~~~~~G~i~vd-~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~ 405 (499)
. + ++.++++++++|+|.|| +++|| +.|+|||+|||+.. +++++.|.+||+.+|.||...
T Consensus 276 ~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 276 VDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNT---------LTLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTS---------SCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCC---------CccHHHHHHHHHHHHHHHcCC
Confidence 4 4 67889999999999999 89999 99999999999952 678999999999999998753
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2e-34 Score=286.87 Aligned_cols=288 Identities=19% Similarity=0.186 Sum_probs=198.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc------------cchhhhhccCCCCC-c-c---ccchhhhc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------------PLLASTCVGTLEFR-S-V---AEPIARIQ 124 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~------------~~~~~~~~g~~~~~-~-~---~~~~~~~~ 124 (499)
+++|+|||||++|+++|..|++.|++|+|||+++.+... +.......+..... . . ...+..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 478999999999999999999999999999998764321 11000011110000 0 0 01122222
Q ss_pred cccccCCCeEEEE-EEEEEEECCCCEEE-EeeecCccccCCCceeeeeCCeEEEcCCC--CccCCCCCCccccC---ccC
Q 010845 125 PAISREPGSYFFL-SHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALGA--EASTFGIHGVKENA---TFL 197 (499)
Q Consensus 125 ~~~~~~~~~~~~~-~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yd~LViAtG~--~~~~~~ipG~~~~~---~~~ 197 (499)
..+....++.++. .+|++++.+++.+. +...+ .++.||+||+|||. .|..|.+||..+.. ++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~----------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDG----------RQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTS----------CEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCC----------CEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 2222224555544 58999998888766 55411 27999999999995 67778999975421 111
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-
Q 010845 198 REVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN- 276 (499)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~- 276 (499)
..+.+ ......++|+|||+|++|+|+|.+|++.+ +|+++++.
T Consensus 153 ~~~~~----------------------~~~~~~~~v~VvG~G~~g~e~a~~l~~~~---------------~v~~v~~~~ 195 (357)
T 4a9w_A 153 AHYST----------------------PAPFAGMRVAIIGGGNSGAQILAEVSTVA---------------ETTWITQHE 195 (357)
T ss_dssp GGCCC----------------------SGGGTTSEEEEECCSHHHHHHHHHHTTTS---------------EEEEECSSC
T ss_pred ccCCC----------------------hhhcCCCEEEEECCCcCHHHHHHHHHhhC---------------CEEEEECCC
Confidence 11100 01123469999999999999999998753 59999875
Q ss_pred -CcCCCC--CHHHHHHHHHHHH----------------------------hCCCEEEeC-ceEEEeCCeEEECCCcEEee
Q 010845 277 -EILSSF--DDRLRHYATTQLS----------------------------KSGVRLVRG-IVKDVDSQKLILNDGTEVPY 324 (499)
Q Consensus 277 -~~l~~~--~~~~~~~~~~~l~----------------------------~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~ 324 (499)
.++|.. +..+.+.+.+.+. +.|+ +... .+.+++.+++.+++|+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~g~~i~~ 274 (357)
T 4a9w_A 196 PAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWADGTERAF 274 (357)
T ss_dssp CCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTTSCEEEC
T ss_pred CeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECCCCEecC
Confidence 355532 3344333333332 4455 4444 78889999999999999999
Q ss_pred eEEEEcCCCCcc-hhcccCCCCCCCCCceeeCCC--CCCCCCCCeEEecc--ccccccCCCCCCCCchHHHHHHHHHHHH
Q 010845 325 GLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEW--LRVPSVQDVFAVGD--CSGYLESTGKTVLPALAQVAERQGKYLF 399 (499)
Q Consensus 325 D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~--l~~~~~~~Ifa~GD--~a~~~~~~g~~~~p~~~~~A~~~g~~aa 399 (499)
|+||+|+|++|+ ++++.++++ +++|+|.||++ +++ +.|||||+|| |+. +.++++..|.+||+.+|
T Consensus 275 D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~vd~~~l~~t-~~~~vya~Gd~d~~~--------~~~~~~~~A~~~g~~~a 344 (357)
T 4a9w_A 275 DAVIWCTGFRPALSHLKGLDLV-TPQGQVEVDGSGLRAL-AVPSVWLLGYGDWNG--------MASATLIGVTRYAREAV 344 (357)
T ss_dssp SEEEECCCBCCCCGGGTTTTCB-CTTSCBCBCTTSCBBS-SCTTEEECSSCGGGS--------TTCSSTTTHHHHHHHHH
T ss_pred CEEEECCCcCCCCcccCccccc-CCCCCccccCCcccCC-CCCCeEEeccccccc--------cchhhhhhhHHHHHHHH
Confidence 999999999999 788888998 88899999999 777 9999999995 552 22667778999999999
Q ss_pred HHHHHHHH
Q 010845 400 SLLNRIGK 407 (499)
Q Consensus 400 ~~i~~~~~ 407 (499)
++|...++
T Consensus 345 ~~i~~~l~ 352 (357)
T 4a9w_A 345 RQVTAYCA 352 (357)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999886
No 74
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-34 Score=281.02 Aligned_cols=282 Identities=18% Similarity=0.173 Sum_probs=196.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhh---hhccC---CCCCccccchhhhccccccCCCeE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---TCVGT---LEFRSVAEPIARIQPAISREPGSY 134 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~---~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~ 134 (499)
.+++|+|||||+||+++|..|++.|++|+|||+.. ......... ...+. +....+...+.+. ....++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~v~ 87 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQ----ALRFGAD 87 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHH----HHHTTCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHH----HHHcCCE
Confidence 45799999999999999999999999999999752 111100000 00000 0111111122221 2224677
Q ss_pred EEEEEEEEEECCC-CEE-EEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC-ccCCCHHHHHHHHHHHH
Q 010845 135 FFLSHCAGIDTDN-HVV-HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLL 211 (499)
Q Consensus 135 ~~~~~v~~id~~~-~~v-~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~~~~~~~~~~ 211 (499)
++.++|+.++... ..+ .+.+ + .++.||+||+|||+.+..|++||.+++. ..+..... ....
T Consensus 88 ~~~~~v~~i~~~~~~~v~~~~~---g--------~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~-- 151 (335)
T 2a87_A 88 LRMEDVESVSLHGPLKSVVTAD---G--------QTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDGF-- 151 (335)
T ss_dssp EECCCEEEEECSSSSEEEEETT---S--------CEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHGG--
T ss_pred EEEeeEEEEEeCCcEEEEEeCC---C--------CEEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cchh--
Confidence 8777889998722 234 3222 2 3799999999999999989999875321 01111111 0000
Q ss_pred HHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCCHHHHHHH
Q 010845 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYA 290 (499)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~~~~~~~~ 290 (499)
....++|+|||+|++|+|+|..|.+.+ .+|+++++.. ++. .+.+.
T Consensus 152 ---------------~~~~~~v~ViG~G~~g~e~a~~l~~~g--------------~~V~l~~~~~~~~~--~~~~~--- 197 (335)
T 2a87_A 152 ---------------FFRDQDIAVIGGGDSAMEEATFLTRFA--------------RSVTLVHRRDEFRA--SKIML--- 197 (335)
T ss_dssp ---------------GGTTCEEEEECSSHHHHHHHHHHTTTC--------------SEEEEECSSSSCSS--CTTHH---
T ss_pred ---------------hcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEcCCcCCc--cHHHH---
Confidence 012369999999999999999998766 8999999874 432 22222
Q ss_pred HHHHHhCCCEEEeC-ceEEEeCCe----EEEC---CC--cEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCC-C
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDSQK----LILN---DG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEW-L 358 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~~~----v~~~---~g--~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~-l 358 (499)
.+.+++.||+++++ +|.+++.+. +.++ +| +++++|.||+|+|++|+. ++. .+++++++|+|.||++ +
T Consensus 198 ~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~ 276 (335)
T 2a87_A 198 DRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTT 276 (335)
T ss_dssp HHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSS
T ss_pred HHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCC
Confidence 24456789999999 899998764 7775 35 579999999999999994 554 5777888899999997 4
Q ss_pred CCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 359 ~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
++ +.|||||+|||+.. .++++..|..||+.+|.+|...+.
T Consensus 277 ~t-~~~~iya~GD~~~~--------~~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 277 ST-SLPGVFAAGDLVDR--------TYRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp BC-SSTTEEECGGGTCC--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCCCEEEeeecCCc--------cHHHHHHHHHhHHHHHHHHHHHhh
Confidence 66 99999999999952 257789999999999999998886
No 75
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.2e-33 Score=278.98 Aligned_cols=293 Identities=17% Similarity=0.159 Sum_probs=200.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcC----CCCcccccchhhhhccCCCC-Ccc-ccchhhhccccccCCCeEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSP----RNHMVFTPLLASTCVGTLEF-RSV-AEPIARIQPAISREPGSYF 135 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~----~~~~~~~~~~~~~~~g~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 135 (499)
+++|+|||||++|+++|..|++.|++|+|||+ .................... ..+ ...+...........++.+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 47899999999999999999999999999998 22211110000000000000 000 0111111111222356778
Q ss_pred EEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcccc--CccCCCHHHHHHHHHHHHHH
Q 010845 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN--ATFLREVHHAQEIRRKLLLN 213 (499)
Q Consensus 136 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~--~~~~~~~~~~~~~~~~~~~~ 213 (499)
+.++|+.++.+.+.+++.. ++ ..+.||+||+|||+.+..|++||.++. .+....+.........
T Consensus 88 ~~~~v~~i~~~~~~~~v~~--~~--------~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 153 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT--DS--------KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGA---- 153 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC--SS--------EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTT----
T ss_pred EEeEEEEEEEcCCEEEEEE--CC--------cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccc----
Confidence 7778999998777554443 12 479999999999999998999987541 1211111111111100
Q ss_pred HhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHH
Q 010845 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293 (499)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~ 293 (499)
+ +....++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. .+.+ ..+.
T Consensus 154 ~-----------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~-~~~~---~~~~ 204 (333)
T 1vdc_A 154 A-----------PIFRNKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDAFRA-SKIM---QQRA 204 (333)
T ss_dssp S-----------GGGTTSEEEEECCSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHHH---HHHH
T ss_pred h-----------hhcCCCeEEEECCChHHHHHHHHHHhcC--------------CeEEEEecCCcCCc-cHHH---HHHH
Confidence 0 0123469999999999999999998766 89999998743321 2222 2244
Q ss_pred HHhCCCEEEeC-ceEEEeCCe-------EEEC---CC--cEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCC-C
Q 010845 294 LSKSGVRLVRG-IVKDVDSQK-------LILN---DG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEW-L 358 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~~-------v~~~---~g--~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~-l 358 (499)
+++.||+++.+ +|.+++.+. +.++ +| +++++|.||+|+|++|+. ++. .+++++++|+|.||++ +
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~ 283 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTT 283 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSC
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhc
Confidence 57789999998 899987542 7775 45 579999999999999995 444 5788888899999997 4
Q ss_pred CCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 359 ~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+| +.|+|||+|||+.. .++++..|..||+.+|.+|.+.+.
T Consensus 284 ~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 284 QT-SVPGVFAAGDVQDK--------KYRQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp BC-SSTTEEECGGGGCS--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCCCEEEeeeccCC--------CchhHHHHHHhHHHHHHHHHHHHH
Confidence 66 99999999999952 157899999999999999999887
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.1e-33 Score=277.80 Aligned_cols=290 Identities=14% Similarity=0.161 Sum_probs=197.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCCcc------------cccchhhhhccCCC-----CC---------
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMV------------FTPLLASTCVGTLE-----FR--------- 114 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~~~------------~~~~~~~~~~g~~~-----~~--------- 114 (499)
+++|+|||||+||+++|..|++.|+ +|+|||+++ .. +.+.......+... ..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4789999999999999999999999 999999986 11 11111111111100 00
Q ss_pred -ccc-cchhhhccccccCCCeEEEEE-EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCcc
Q 010845 115 -SVA-EPIARIQPAISREPGSYFFLS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK 191 (499)
Q Consensus 115 -~~~-~~~~~~~~~~~~~~~~~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~ 191 (499)
... ..+......+....++.++.+ +|+.++.+.+.+.+... + .++.||+||+|||+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~-~---------g~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATT-T---------ETYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEES-S---------CCEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeC-C---------CEEEeCEEEECCCCCCc-cCCCC--
Confidence 000 111111111222346666654 78889876544444331 1 25899999999999865 56776
Q ss_pred ccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEE
Q 010845 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vt 271 (499)
+..++...+.+ .+..+.++|+|||+|++|+|+|..|.+.+ .+|+
T Consensus 150 ~~~~~~~~~~~----------------------~~~~~~~~vvVvG~G~~g~e~a~~l~~~g--------------~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIED----------------------FDNFNKGQYVVIGGNESGFDAAYQLAKNG--------------SDIA 193 (369)
T ss_dssp SSCEEGGGCSC----------------------GGGSCSSEEEEECCSHHHHHHHHHHHHTT--------------CEEE
T ss_pred CceechhhcCC----------------------hhhcCCCEEEEECCCcCHHHHHHHHHhcC--------------CeEE
Confidence 22222211100 00113368999999999999999999876 8999
Q ss_pred EEeCC-CcCC-------CCCHHHHHHHHHHHHhCC-CEEEeC-ceEEE--eCC--eEEECCCcEEe-eeEEEEcCCCCcc
Q 010845 272 LIEAN-EILS-------SFDDRLRHYATTQLSKSG-VRLVRG-IVKDV--DSQ--KLILNDGTEVP-YGLLVWSTGVGPS 336 (499)
Q Consensus 272 lv~~~-~~l~-------~~~~~~~~~~~~~l~~~g-V~v~~~-~v~~v--~~~--~v~~~~g~~i~-~D~vi~a~G~~p~ 336 (499)
++++. .+++ .+++.+.+.+.+.|++.| |+++.+ +|.++ +++ .+++.||+++. +|.||+|+|++|+
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 99987 4553 256788889999999997 999999 89998 445 46778887775 5999999999999
Q ss_pred h-hcccCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 337 T-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 337 ~-~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
. ++.+.+++ +++|++.||++++.+++|||||+|||+..+.. . ......|.+||+++|++|...+.
T Consensus 274 ~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~----~-~~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 274 KNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNA----K-LCYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp GSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC----C-CCSHHHHGGGHHHHHHHHHHHTT
T ss_pred cchhhhhhcc-CCCCCEEechhhcccCCCCeEEeccccccCCe----e-EEEEehhhHHHHHHHHHHhcccC
Confidence 5 66655566 77899999987554499999999999975321 1 22345688899999999987664
No 77
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=6.5e-32 Score=281.80 Aligned_cols=281 Identities=19% Similarity=0.187 Sum_probs=200.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc--ccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF--TPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (499)
..++|+|||||+||+++|.+|++.|++|+|||++..-.+ ...+.... +.. . .....+...........++.++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~-~~~-~-~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYI-SVP-K-TEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBT-TBS-S-BCHHHHHHHHHHHHHTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccC-CCC-C-CCHHHHHHHHHHHHHHcCCEEEcC
Confidence 457999999999999999999999999999987421100 00000000 000 0 000112221111223457888776
Q ss_pred -EEEEEECCC-----CEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC---ccCCCHHHHHHHHHH
Q 010845 139 -HCAGIDTDN-----HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA---TFLREVHHAQEIRRK 209 (499)
Q Consensus 139 -~v~~id~~~-----~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~---~~~~~~~~~~~~~~~ 209 (499)
+|+.++.+. ..|++.+ + ..+.||+||+|||+.+..+++||.+++. ......
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~---g--------~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~--------- 347 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETAS---G--------AVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPH--------- 347 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETT---S--------CEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTT---------
T ss_pred CEEEEEEeccCCCceEEEEECC---C--------CEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeec---------
Confidence 899998642 2344332 2 3799999999999999989999975321 111000
Q ss_pred HHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCCHHHHH
Q 010845 210 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRH 288 (499)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~~~~~~ 288 (499)
.+ ......++|+|||||++|+|+|..|+..+ .+|+++++.+ +++ + +
T Consensus 348 ------------~~-~~~~~~k~V~ViGgG~~g~E~A~~L~~~g--------------~~Vtlv~~~~~l~~--~----~ 394 (521)
T 1hyu_A 348 ------------CD-GPLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMKA--D----Q 394 (521)
T ss_dssp ------------CC-GGGGBTSEEEEECCSHHHHHHHHHHHHHB--------------SEEEEECSSSSCCS--C----H
T ss_pred ------------Cc-hhhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCcccCc--C----H
Confidence 00 01124569999999999999999999876 8999999874 432 2 3
Q ss_pred HHHHHHHh-CCCEEEeC-ceEEEeCC-----eEEECC---Cc--EEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeC
Q 010845 289 YATTQLSK-SGVRLVRG-IVKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGID 355 (499)
Q Consensus 289 ~~~~~l~~-~gV~v~~~-~v~~v~~~-----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd 355 (499)
.+.+.|++ .||+++++ .+++++.+ ++.+.+ |+ ++++|.||+++|..|+ +++.. .++++++|+|.||
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd 473 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIID 473 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCC
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeC
Confidence 45666777 69999999 89998754 466653 53 6899999999999998 47665 4777889999999
Q ss_pred CCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 356 ~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+++|| +.|+|||+|||+.. .++++..|+.||..||.+|...+.
T Consensus 474 ~~~~t-s~p~VfA~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 474 AKCET-SVKGVFAAGDCTTV--------PYKQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp TTCBC-SSTTEEECSTTBCC--------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC-CCCCEEEeecccCC--------CcceeeehHHhHHHHHHHHHHHHH
Confidence 99998 99999999999963 146789999999999999998876
No 78
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.98 E-value=6.1e-33 Score=310.18 Aligned_cols=348 Identities=13% Similarity=0.072 Sum_probs=223.5
Q ss_pred ccccccccccc--ccccCCCCCCCCCccceecccCCCccCCCCCC-ccccccCCCCC---CCCCCCCcEEEECCchHHHH
Q 010845 3 LFKHLLRNPTA--KSYSYSSPSIIMPSNLILTCLSHFTTDASPST-VQLTQYSGLGP---TKANEKPRVVVLGSGWAGCR 76 (499)
Q Consensus 3 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~VvIIGgG~aGl~ 76 (499)
|+--++|+|.+ +|+..|.+.........+..+.+|..+..... ......+..+. ......++|+|||||+||++
T Consensus 122 ~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~ 201 (1025)
T 1gte_A 122 LGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASIS 201 (1025)
T ss_dssp THHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHHHH
T ss_pred hhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECccHHHHH
Confidence 34456899998 99999999876544567777777765531000 00000000000 01123579999999999999
Q ss_pred HHHhccCCCC-eEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEEEEEEECCCCEEEEeee
Q 010845 77 LMKGIDTSLY-DVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETV 155 (499)
Q Consensus 77 aA~~L~~~g~-~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~ 155 (499)
+|.+|++.|+ +|+|||+++.+.... . .+..........+..... +....+++++.++... .+.+++++
T Consensus 202 aA~~L~~~G~~~Vtv~E~~~~~GG~~-~----~~ip~~~~~~~~~~~~~~-~~~~~gv~~~~~~~v~----~~~v~~~~- 270 (1025)
T 1gte_A 202 CASFLARLGYSDITIFEKQEYVGGLS-T----SEIPQFRLPYDVVNFEIE-LMKDLGVKIICGKSLS----ENEITLNT- 270 (1025)
T ss_dssp HHHHHHHTTCCCEEEEESSSSCSTHH-H----HTSCTTTSCHHHHHHHHH-HHHTTTCEEEESCCBS----TTSBCHHH-
T ss_pred HHHHHHhcCCCcEEEEeCCCCCCccc-c----ccCCcccCCHHHHHHHHH-HHHHCCcEEEcccEec----cceEEhhh-
Confidence 9999999999 799999987654431 1 111111100011111111 2223577877655432 12333322
Q ss_pred cCccccCCCceeeeeCCeEEEcCCC-CccCCCC-CCccccCccCCCHHHHHHHHHHHHH---HHhhcCCCCCCHHHHhcc
Q 010845 156 TDELRTLEPWKFKISYDKLVIALGA-EASTFGI-HGVKENATFLREVHHAQEIRRKLLL---NLMLSDVPGISEEEKSRL 230 (499)
Q Consensus 156 ~~~~~~~~~~~~~i~yd~LViAtG~-~~~~~~i-pG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~ 230 (499)
..++.||+||||||+ .|+.+++ +|+++.. .+.+..+..+..+.... ++....++ ...
T Consensus 271 ----------~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~-------~~~ 332 (1025)
T 1gte_A 271 ----------LKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQ-GFYTSKDFLPLVAKSSKAGMCACHSPLP-------SIR 332 (1025)
T ss_dssp ----------HHHTTCCEEEECCCCCEECCCGGGTTCCTTT-TEEEHHHHHHHHHHHHCBTTBSCCCCCC-------CCC
T ss_pred ----------cCccCCCEEEEecCCCCCCCCCCCCCCCCCC-CEEEhHHHHHHHHhhccccccccccccc-------ccC
Confidence 125789999999999 4876654 4653210 11122222221111000 00000011 123
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC--CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--EILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 307 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~--~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~ 307 (499)
++|+|||||++|+|+|..+.+.+. .+||++++. .+++.+++++ +.+++.||+++.+ .+.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~-------------~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~ 394 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGA-------------RRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPR 394 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTC-------------SEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEE
T ss_pred CcEEEECCChHHHHHHHHHHHcCC-------------CEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCce
Confidence 489999999999999999988761 389999986 4677776654 4567789999988 777
Q ss_pred EEeC--Ce---EEEC------CC---------cEEeeeEEEEcCCCCcc--hhccc-CCCCCCCCCceeeCC-CCCCCCC
Q 010845 308 DVDS--QK---LILN------DG---------TEVPYGLLVWSTGVGPS--TLVKS-LDLPKSPGGRIGIDE-WLRVPSV 363 (499)
Q Consensus 308 ~v~~--~~---v~~~------~g---------~~i~~D~vi~a~G~~p~--~~~~~-~~l~~~~~G~i~vd~-~l~~~~~ 363 (499)
++.. +. |++. +| .++++|.||+|+|++|+ .++.. .+++++++|+|.||+ ++|| +.
T Consensus 395 ~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~T-s~ 473 (1025)
T 1gte_A 395 KVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQT-SE 473 (1025)
T ss_dssp EEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBC-SS
T ss_pred EEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCcc-CC
Confidence 7753 32 3332 22 36899999999999874 46665 488899999999997 8998 99
Q ss_pred CCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 364 QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 364 ~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|+|||+|||+.. +.++..|++||+.||++|...+.
T Consensus 474 ~~VfA~GD~~~~---------~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 474 PWVFAGGDIVGM---------ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp TTEEECSGGGCS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCCCC---------chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999951 67899999999999999998775
No 79
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=2.3e-31 Score=273.91 Aligned_cols=271 Identities=11% Similarity=0.092 Sum_probs=187.9
Q ss_pred CcEEEECCchHHHHHHHhccC---CCCe---EEEEcCCCCcccccchh-----------------h-hhc-------c--
Q 010845 63 PRVVVLGSGWAGCRLMKGIDT---SLYD---VVCVSPRNHMVFTPLLA-----------------S-TCV-------G-- 109 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~---~g~~---V~lie~~~~~~~~~~~~-----------------~-~~~-------g-- 109 (499)
++|+|||||+||+++|..|++ .|++ |+|||+++.+....... . ... +
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 99999987543221100 0 000 0
Q ss_pred --------------CCCCCccccchhhhccccccCCCeE---EEEEEEEEEECCCC----EEEEeeecCccccCCCceee
Q 010845 110 --------------TLEFRSVAEPIARIQPAISREPGSY---FFLSHCAGIDTDNH----VVHCETVTDELRTLEPWKFK 168 (499)
Q Consensus 110 --------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~~ 168 (499)
.+....+...+..+ ....++. ...++|+.|+...+ .|++.+..++ +..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g------~~~~ 152 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGR----VEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD------TIYS 152 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHH----HHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT------EEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHH----HHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC------ceEE
Confidence 00000111111211 1112332 23578999987655 4555431111 1247
Q ss_pred eeCCeEEEcCC--CCccCCCCCCcccc---CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHH
Q 010845 169 ISYDKLVIALG--AEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 243 (499)
Q Consensus 169 i~yd~LViAtG--~~~~~~~ipG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gv 243 (499)
+.||+||+||| +.|+.|.+||.+.. .++..++.+ ......++|+|||+|++|+
T Consensus 153 ~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~----------------------~~~~~~k~VvVVG~G~sg~ 210 (464)
T 2xve_A 153 EEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRD----------------------ALEFKDKTVLLVGSSYSAE 210 (464)
T ss_dssp EEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCC----------------------GGGGTTSEEEEECCSTTHH
T ss_pred EEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCC----------------------HhHcCCCEEEEEcCCCCHH
Confidence 89999999999 88999999997542 122211110 0112346999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEECCCcEE
Q 010845 244 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEV 322 (499)
Q Consensus 244 e~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~~g~~i 322 (499)
|+|.+|+..+ .+|+++++. .+++..- ..||+++ ..|.++++++|+++||+++
T Consensus 211 eiA~~l~~~g--------------~~V~li~~~~~~~~~~~------------~~~V~~~-~~V~~i~~~~V~~~dG~~i 263 (464)
T 2xve_A 211 DIGSQCYKYG--------------AKKLISCYRTAPMGYKW------------PENWDER-PNLVRVDTENAYFADGSSE 263 (464)
T ss_dssp HHHHHHHHTT--------------CSEEEEECSSCCCCCCC------------CTTEEEC-SCEEEECSSEEEETTSCEE
T ss_pred HHHHHHHHhC--------------CeEEEEEECCCCCCCCC------------CCceEEc-CCeEEEeCCEEEECCCCEE
Confidence 9999999987 899999986 5554310 2478887 6788998899999999999
Q ss_pred eeeEEEEcCCCCcc-hhccc-CCCCCCCCCceeeCCC---CCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHH
Q 010845 323 PYGLLVWSTGVGPS-TLVKS-LDLPKSPGGRIGIDEW---LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 397 (499)
Q Consensus 323 ~~D~vi~a~G~~p~-~~~~~-~~l~~~~~G~i~vd~~---l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~ 397 (499)
++|.||+|||++|+ +++.. +++..+++|++ ++.+ +++ +.|+|||+|||+. ...+..|..||++
T Consensus 264 ~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~----------~~~~~~a~~qa~~ 331 (464)
T 2xve_A 264 KVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ----------WYSFNMFDAQAWY 331 (464)
T ss_dssp ECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC----------SSCHHHHHHHHHH
T ss_pred eCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc----------ccchHHHHHHHHH
Confidence 99999999999999 67765 67777766565 4433 455 8999999999884 3467889999999
Q ss_pred HHHHHHH
Q 010845 398 LFSLLNR 404 (499)
Q Consensus 398 aa~~i~~ 404 (499)
+|++|..
T Consensus 332 ~a~~l~G 338 (464)
T 2xve_A 332 ARDVIMG 338 (464)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998853
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=9.4e-32 Score=275.49 Aligned_cols=301 Identities=14% Similarity=0.144 Sum_probs=195.8
Q ss_pred CCcEEEECCchHHHHHHHhccC-C------CCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-S------LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSY 134 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~------g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (499)
+++|+|||||+||+++|..|++ . |++|+|||+.+.+. ..+.+.+..+.....++...+... ....+++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g-g~~~~gv~p~~~~~~~~~~~~~~~----~~~~~v~ 77 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW-GLVRSGVAPDHPKIKSISKQFEKT----AEDPRFR 77 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS-THHHHTSCTTCTGGGGGHHHHHHH----HTSTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC-CccccccCCCCCCHHHHHHHHHHH----HhcCCCE
Confidence 5799999999999999999998 6 89999999987743 222222222222222333333332 2346787
Q ss_pred EEEEEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCC-ccCCCCCCcc-ccCccCCCHHHHHHHHHHHHH
Q 010845 135 FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE-ASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (499)
Q Consensus 135 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~-~~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~ 212 (499)
++.+ +. + .+.|++++ ..+.||+||+|||+. ++.+++||.+ ..++ +. ..+...+..
T Consensus 78 ~~~~-v~-v---~~~v~~~~------------~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~---~~---~~~~~~~~~ 134 (456)
T 1lqt_A 78 FFGN-VV-V---GEHVQPGE------------LSERYDAVIYAVGAQSDRMLNIPGEDLPGSI---AA---VDFVGWYNA 134 (456)
T ss_dssp EEES-CC-B---TTTBCHHH------------HHHHSSEEEECCCCCEECCCCCTTTTSTTEE---EH---HHHHHHHTT
T ss_pred EEee-EE-E---CCEEEECC------------CeEeCCEEEEeeCCCCCCCCCCCCCCCCCcE---EH---HHHHhhhhc
Confidence 7654 21 2 23343322 257899999999997 6888999974 1222 22 222221110
Q ss_pred HHhh-cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcC-----CCC--CceEEEEEeCC-CcCCCCC
Q 010845 213 NLML-SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-----HVK--DYIHVTLIEAN-EILSSFD 283 (499)
Q Consensus 213 ~~~~-~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~-----~~~--~~~~Vtlv~~~-~~l~~~~ 283 (499)
.... ...+ ....++|+|||+|++|+|+|..|......-....++ .++ ...+|+++++. .++..|.
T Consensus 135 ~~d~~~~~~------~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~ 208 (456)
T 1lqt_A 135 HPHFEQVSP------DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFT 208 (456)
T ss_dssp CGGGTTCCC------CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCC
T ss_pred Ccccccchh------hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccC
Confidence 0000 0111 013469999999999999999998753110000000 000 12589999986 5544332
Q ss_pred H-------------------HH------------------HHHHHHHHHh------CCCEEEeC-ceEEEeCC----eEE
Q 010845 284 D-------------------RL------------------RHYATTQLSK------SGVRLVRG-IVKDVDSQ----KLI 315 (499)
Q Consensus 284 ~-------------------~~------------------~~~~~~~l~~------~gV~v~~~-~v~~v~~~----~v~ 315 (499)
+ ++ .+.+.+.+++ +||+++.+ .+.++.++ +|.
T Consensus 209 ~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~ 288 (456)
T 1lqt_A 209 TLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIV 288 (456)
T ss_dssp HHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEE
T ss_pred hHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEE
Confidence 1 11 2344455555 79999999 89998764 366
Q ss_pred EC----------------CC--cEEeeeEEEEcCCCCcchhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecccccccc
Q 010845 316 LN----------------DG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 377 (499)
Q Consensus 316 ~~----------------~g--~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~ 377 (499)
+. +| ++++||+||+|+|++|+++ .+++++++|+|.||+++|+.+.|+|||+|||+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~--- 362 (456)
T 1lqt_A 289 LGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKR--- 362 (456)
T ss_dssp EEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHH---
T ss_pred EEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCC---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCC---
Confidence 64 34 4699999999999999984 467788889999999999559999999999996
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 378 STGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 378 ~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+. ...+..|+.||..+|.+|...+.
T Consensus 363 --gp---~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 363 --GP---TGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp --CS---CSCTTHHHHHHHHHHHHHHHHHH
T ss_pred --CC---chhHHHHHHHHHHHHHHHHHHHH
Confidence 21 22345789999999999988775
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=5.6e-31 Score=270.00 Aligned_cols=301 Identities=15% Similarity=0.123 Sum_probs=189.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCC--CeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g--~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
+++|+|||||+||+++|..|++.| ++|+|||+++.+. ..+...+........++...+.+ .....++.++.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g-g~~~~g~~p~~~~~~~~~~~~~~----~~~~~gv~~~~~~ 80 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF-GLVRFGVAPDHPEVKNVINTFTQ----TARSDRCAFYGNV 80 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC-THHHHTSCTTCGGGGGHHHHHHH----HHTSTTEEEEBSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC-ceeecccCCCCccHHHHHHHHHH----HHHhCCcEEEeee
Confidence 479999999999999999999887 9999999998763 22222111111111122222222 2334677766542
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCc-cCCCCCCcc-ccCccCCCHHHHHHHHHHHHHHHhhc
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA-STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~-~~~~ipG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
.. .+.|++.+ ..+.||+||+|||+.+ +.|++||.+ +.+++ . ..+...+...-...
T Consensus 81 ~v-----~~~V~~~~------------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~---~---~~~~~~~~~~~d~~ 137 (460)
T 1cjc_A 81 EV-----GRDVTVQE------------LQDAYHAVVLSYGAEDHQALDIPGEELPGVFS---A---RAFVGWYNGLPENR 137 (460)
T ss_dssp CB-----TTTBCHHH------------HHHHSSEEEECCCCCEECCCCCTTTTSTTEEE---H---HHHHHHHTTCGGGT
T ss_pred EE-----eeEEEecc------------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEE---H---HHHHHHhhcCcccc
Confidence 21 12233221 2478999999999995 778999974 22222 2 22211110000000
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHH-hcC-----CC-CCce-EEEEEeCC-Cc----------
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ-RYS-----HV-KDYI-HVTLIEAN-EI---------- 278 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~-~~~-----~~-~~~~-~Vtlv~~~-~~---------- 278 (499)
..+. ....++|+|||+|++|+|+|..|.+.... +.. ..+ .+ +.+. +|+++++. .+
T Consensus 138 ~~~~-----~~~~~~vvVIGgG~~g~e~A~~L~~~~~~-l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~ 211 (460)
T 1cjc_A 138 ELAP-----DLSCDTAVILGQGNVALDVARILLTPPDH-LEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELR 211 (460)
T ss_dssp TCCC-----CTTSSEEEEESCSHHHHHHHHHHHSCGGG-GTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHH
T ss_pred cccc-----CCCCCEEEEECCCHHHHHHHHHHhhchhh-hccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHH
Confidence 0000 01346999999999999999999831100 000 000 00 1124 79999986 33
Q ss_pred ----CCCC-------------------CHH---HHHHHHHHHHh--------------CCCEEEeC-ceEEEeCC-----
Q 010845 279 ----LSSF-------------------DDR---LRHYATTQLSK--------------SGVRLVRG-IVKDVDSQ----- 312 (499)
Q Consensus 279 ----l~~~-------------------~~~---~~~~~~~~l~~--------------~gV~v~~~-~v~~v~~~----- 312 (499)
+|.. +.. +.+.+.+.+++ +||+++++ .+.++.++
T Consensus 212 ~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~ 291 (460)
T 1cjc_A 212 EMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRR 291 (460)
T ss_dssp HHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSS
T ss_pred HhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCce
Confidence 2311 110 23334444555 89999998 78888643
Q ss_pred --eEEEC---------------CC--cEEeeeEEEEcCCCCcchhcccCCC-CCCCCCceeeCCCCCCCCCCCeEEeccc
Q 010845 313 --KLILN---------------DG--TEVPYGLLVWSTGVGPSTLVKSLDL-PKSPGGRIGIDEWLRVPSVQDVFAVGDC 372 (499)
Q Consensus 313 --~v~~~---------------~g--~~i~~D~vi~a~G~~p~~~~~~~~l-~~~~~G~i~vd~~l~~~~~~~Ifa~GD~ 372 (499)
+|.+. +| ++++||+||+++|++|+++ .++ +++++|+|.||+++||.+.|+|||+|||
T Consensus 292 v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~ 368 (460)
T 1cjc_A 292 AAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWV 368 (460)
T ss_dssp EEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---CTTSCCBTTTTBCCEETTEETTCTTEEECTHH
T ss_pred EEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---CCCcccccCCCeeECCCCcCcCCCCEEEEEeC
Confidence 25543 34 5799999999999999974 577 8888899999999999448999999999
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 373 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 373 a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+. +. ...+..|+.+|+.+|.+|...+.
T Consensus 369 ~~-----g~---~~~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 369 KR-----GP---TGVITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp HH-----CT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-----CC---CccHHHHHHHHHHHHHHHHHHHH
Confidence 95 21 23467899999999999998876
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=7.4e-30 Score=263.38 Aligned_cols=303 Identities=12% Similarity=0.091 Sum_probs=189.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCC-----CeEEEEcCCCCcccccchh--hhhccC---------CCCCc---------
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSL-----YDVVCVSPRNHMVFTPLLA--STCVGT---------LEFRS--------- 115 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g-----~~V~lie~~~~~~~~~~~~--~~~~g~---------~~~~~--------- 115 (499)
.+++|||||||+||+++|..|++.| ++|+|||+++.+.|.+... ...... ..+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3469999999999999999999998 9999999999877654211 000000 00000
Q ss_pred ----------------cccchhhhccccccCCCeEEE-EEEEEEEECC---CCE--EEEeeecCccccCCCceeeeeCCe
Q 010845 116 ----------------VAEPIARIQPAISREPGSYFF-LSHCAGIDTD---NHV--VHCETVTDELRTLEPWKFKISYDK 173 (499)
Q Consensus 116 ----------------~~~~~~~~~~~~~~~~~~~~~-~~~v~~id~~---~~~--v~~~~~~~~~~~~~~~~~~i~yd~ 173 (499)
....+.++...+....++.+. ..+|+.|+.+ .+. +.+...+ + .++..++.||+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g----~g~~~~~~~d~ 183 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-A----DGEELVRTTRA 183 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-T----TSCEEEEEESE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-C----CCceEEEEeCE
Confidence 001111222122222233333 4678898876 442 2333211 1 02234799999
Q ss_pred EEEcCCCCccCCC-CCCccc--cCccCCCHHHH-HHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHH
Q 010845 174 LVIALGAEASTFG-IHGVKE--NATFLREVHHA-QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGEL 249 (499)
Q Consensus 174 LViAtG~~~~~~~-ipG~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l 249 (499)
||+|||+.|..|+ +++... ..++...+.+. ..+. ....+.++|+|||||.+|+|+|.+|
T Consensus 184 lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~vvVvGgG~sg~e~a~~l 246 (463)
T 3s5w_A 184 LVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQP-----------------CSSGKPMKIAIIGGGQSAAEAFIDL 246 (463)
T ss_dssp EEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHHHH
T ss_pred EEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhh-----------------hcccCCCeEEEECCCHhHHHHHHHH
Confidence 9999999877665 233322 22333222211 1110 0011346999999999999999999
Q ss_pred HHH--HHHHHHHhcCCCCCceEEEEEeCC-CcCCC--------------------CCHHHHHHHHHHHHh----------
Q 010845 250 SDF--IMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------FDDRLRHYATTQLSK---------- 296 (499)
Q Consensus 250 ~~~--~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~--------------------~~~~~~~~~~~~l~~---------- 296 (499)
.+. + .+|+++++. .++|. +++.....+.+.+..
T Consensus 247 ~~~~~~--------------~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 312 (463)
T 3s5w_A 247 NDSYPS--------------VQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDL 312 (463)
T ss_dssp HHHCTT--------------EEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHH
T ss_pred HhcCCC--------------CeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHH
Confidence 987 4 899999987 45442 223333333333322
Q ss_pred ----------------CCCEEEeC-ceEEEeCC--e--EEEC---CCc--EEeeeEEEEcCCCCcc---hhcccCCCCCC
Q 010845 297 ----------------SGVRLVRG-IVKDVDSQ--K--LILN---DGT--EVPYGLLVWSTGVGPS---TLVKSLDLPKS 347 (499)
Q Consensus 297 ----------------~gV~v~~~-~v~~v~~~--~--v~~~---~g~--~i~~D~vi~a~G~~p~---~~~~~~~l~~~ 347 (499)
.||+++.+ .|++++.+ . +.+. +|+ ++++|.||+|||++|+ +++..+....
T Consensus 313 ~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~- 391 (463)
T 3s5w_A 313 IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL- 391 (463)
T ss_dssp HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-
Confidence 69999999 78888653 2 5555 665 4999999999999998 4555543322
Q ss_pred CCCceeeCCCCCCCC----CCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010845 348 PGGRIGIDEWLRVPS----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 406 (499)
Q Consensus 348 ~~G~i~vd~~l~~~~----~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~ 406 (499)
|++.||+++|+.. .|+|||+|||....+. ..|.....|.+++++++..+.+..
T Consensus 392 --g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~----~~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 392 --GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGL----SDTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp --C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCT----TTTSSTTHHHHHHHHHHHHHHHHC
T ss_pred --CCcccCcccccccCCCCCCeEEEcCCCcccCCc----CccchhHHHHHHHHHHHHHHhhcC
Confidence 7899999999854 4569999999875432 336778889999999887766554
No 83
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=6e-30 Score=262.66 Aligned_cols=279 Identities=14% Similarity=0.077 Sum_probs=181.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCCCcccccchhhh----------------------------hccC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFTPLLAST----------------------------CVGT 110 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~~~~~~~~~~~~----------------------------~~g~ 110 (499)
..++|+|||||++|+++|..|++.|. +|+|||+++........... ....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 99999998644211110000 0000
Q ss_pred ---C--------------C-CCc--c---ccchhhhccccccCCCe-EEEEEEEEEEECCCCEEEEeeecCccccCCCc-
Q 010845 111 ---L--------------E-FRS--V---AEPIARIQPAISREPGS-YFFLSHCAGIDTDNHVVHCETVTDELRTLEPW- 165 (499)
Q Consensus 111 ---~--------------~-~~~--~---~~~~~~~~~~~~~~~~~-~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~- 165 (499)
+ . ... . ...+.++...+....+. ....++|+.++...+.+.+...+.. .++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~----~G~~ 160 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTK----AGSP 160 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESS----TTCC
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecC----CCCe
Confidence 0 0 000 0 00111111111111111 2235789999877664444331100 011
Q ss_pred eeeeeCCeEEEcCCC--CccCCCCCCcccc-------CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEe
Q 010845 166 KFKISYDKLVIALGA--EASTFGIHGVKEN-------ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVV 236 (499)
Q Consensus 166 ~~~i~yd~LViAtG~--~~~~~~ipG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVv 236 (499)
..++.||+||+|||. .|+.|.+||+++. .++.+++.+ ......++|+||
T Consensus 161 ~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~----------------------~~~~~~k~VvVv 218 (447)
T 2gv8_A 161 ISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFRE----------------------PELFVGESVLVV 218 (447)
T ss_dssp EEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCC----------------------GGGGTTCCEEEE
T ss_pred eEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCC----------------------hhhcCCCEEEEE
Confidence 236899999999998 7888899997531 222111111 011234699999
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHhcCCCCCceE-EEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe--CCe
Q 010845 237 GGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD--SQK 313 (499)
Q Consensus 237 GgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~-Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~v~~v~--~~~ 313 (499)
|+|++|+|+|.+|+..+ .+ |+++++...+ ++..||++. ..|++++ +++
T Consensus 219 G~G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~--------------l~~~~i~~~-~~v~~~~~~~~~ 269 (447)
T 2gv8_A 219 GGASSANDLVRHLTPVA--------------KHPIYQSLLGGGD--------------IQNESLQQV-PEITKFDPTTRE 269 (447)
T ss_dssp CSSHHHHHHHHHHTTTS--------------CSSEEEECTTCCS--------------CBCSSEEEE-CCEEEEETTTTE
T ss_pred ccCcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc--------------CCCCCeEEe-cCeEEEecCCCE
Confidence 99999999999998876 77 9999987422 455677742 3788884 458
Q ss_pred EEECCCcE-EeeeEEEEcCCCCcc-hh-----cccCCCCCCCCCceeeCCCCCC--CCCCCeEEeccccccccCCCCCCC
Q 010845 314 LILNDGTE-VPYGLLVWSTGVGPS-TL-----VKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVL 384 (499)
Q Consensus 314 v~~~~g~~-i~~D~vi~a~G~~p~-~~-----~~~~~l~~~~~G~i~vd~~l~~--~~~~~Ifa~GD~a~~~~~~g~~~~ 384 (499)
|+++||++ +++|.||+|||++|+ ++ +..++..+..++.+.++.+.++ .+.|+||++||+..
T Consensus 270 v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~---------- 339 (447)
T 2gv8_A 270 IYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALH---------- 339 (447)
T ss_dssp EEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBS----------
T ss_pred EEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccc----------
Confidence 99999986 799999999999999 67 6654322233455666655553 48999999999984
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 010845 385 PALAQVAERQGKYLFSLLNR 404 (499)
Q Consensus 385 p~~~~~A~~~g~~aa~~i~~ 404 (499)
..+++.|..||+++|++|..
T Consensus 340 ~~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 340 VVPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp SCHHHHHHHHHHHHHHHHTT
T ss_pred ccCchHHHHHHHHHHHHHcC
Confidence 23788999999999999864
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=4.5e-30 Score=277.87 Aligned_cols=274 Identities=15% Similarity=0.172 Sum_probs=184.7
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhcccc--ccCCCeEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAI--SREPGSYFFL 137 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 137 (499)
..+++|+|||||+|||++|..|++.|++|+|||+++.+...........+..........+......+ ....++.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~--- 463 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQL--- 463 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEE---
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceE---
Confidence 34689999999999999999999999999999998876544222211112111111111111111111 0001222
Q ss_pred EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCC--------ccCCCCCCccccCccCCCHHHHHHHHHH
Q 010845 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE--------ASTFGIHGVKENATFLREVHHAQEIRRK 209 (499)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~--------~~~~~ipG~~~~~~~~~~~~~~~~~~~~ 209 (499)
++. ++.+++++ ...+.||+||||||+. |..|++||.+++...+.+..+...
T Consensus 464 -----i~~-~~~v~~~~-----------~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~---- 522 (729)
T 1o94_A 464 -----ALG-QKPMTADD-----------VLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD---- 522 (729)
T ss_dssp -----ECS-CCCCCHHH-----------HHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH----
T ss_pred -----EEe-CeEEehhh-----------ccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc----
Confidence 222 22333222 1357899999999998 456788997532212223333211
Q ss_pred HHHHHhhcCCCCCCHHHHhccccEEEeC--cChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC--CCCHH
Q 010845 210 LLLNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--SFDDR 285 (499)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~vvVvG--gG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~--~~~~~ 285 (499)
. .. ...++|+||| ||++|+|+|..|++.+ .+|+++++.++++ .++..
T Consensus 523 ------~-~~--------~~gk~VvVIG~GgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~l~~~~~~~~~ 573 (729)
T 1o94_A 523 ------G-KK--------KIGKRVVILNADTYFMAPSLAEKLATAG--------------HEVTIVSGVHLANYMHFTLE 573 (729)
T ss_dssp ------C-CS--------CCCSEEEEEECCCSSHHHHHHHHHHHTT--------------CEEEEEESSCTTHHHHHTTC
T ss_pred ------C-CC--------CCCCeEEEEcCCCCchHHHHHHHHHHcC--------------CEEEEEeccccccccccccc
Confidence 0 01 2246999999 9999999999999887 8999999876332 12323
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEEC----CC-cE------------------EeeeEEEEcCCCCcch-hcc
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DG-TE------------------VPYGLLVWSTGVGPST-LVK 340 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~----~g-~~------------------i~~D~vi~a~G~~p~~-~~~ 340 (499)
...+.+.|++.||+++++ +|.+++++++.+. ++ ++ +++|.||+|+|++|+. ++.
T Consensus 574 -~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~ 652 (729)
T 1o94_A 574 -YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWN 652 (729)
T ss_dssp -HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHH
T ss_pred -HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHH
Confidence 456778889999999999 8999998876542 33 33 9999999999999994 554
Q ss_pred cCCCCCCCCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010845 341 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 406 (499)
Q Consensus 341 ~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~ 406 (499)
.++ ..+|+++|| +.|+|||+|||+. +.++..|++||+.+|.+|...+
T Consensus 653 ~l~--------~~vd~~~~t-~~~~VyAiGD~~~----------~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 653 ELK--------ARESEWAEN-DIKGIYLIGDAEA----------PRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp HHH--------HTGGGTGGG-TCCEEEECGGGTS----------CCCHHHHHHHHHHHHHTTTSSC
T ss_pred HHh--------hhccccccc-CCCCeEEEeCccc----------hhhHHHHHHHHHHHHHHhhhhc
Confidence 432 136889998 8999999999995 5668889999999999986554
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=9.4e-31 Score=282.07 Aligned_cols=268 Identities=16% Similarity=0.127 Sum_probs=189.3
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
..+++|||||||+|||++|+.|++.|++|+|||+++.+...........+......+...+... +....++.+..++
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~gv~~~~~~ 465 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAV---LAELPNVEIYRES 465 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHH---HHTCTTEEEESSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHH---HHHcCCCEEEECC
Confidence 4568999999999999999999999999999999987766544433333332222222222222 2222355554321
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCc--------cCCCCCCccccCccCCCHHHHHHHHHHHH
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA--------STFGIHGVKENATFLREVHHAQEIRRKLL 211 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~--------~~~~ipG~~~~~~~~~~~~~~~~~~~~~~ 211 (499)
.+..++ ..++.||+||+|||+.+ ..|.+||.+.. .+.+..+..
T Consensus 466 ---------~v~~~~-----------~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l------- 516 (690)
T 3k30_A 466 ---------PMTGDD-----------IVEFGFEHVITATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLF------- 516 (690)
T ss_dssp ---------CCCHHH-----------HHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHH-------
T ss_pred ---------eecHHH-----------HhhcCCCEEEEcCCCccccccccccCCCCCCCCCCC--cEEcHHHHh-------
Confidence 121111 13678999999999984 46778887431 111222211
Q ss_pred HHHhhcCCCCCCHHHHhccccEEEeC--cChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCC-HHHH
Q 010845 212 LNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD-DRLR 287 (499)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvVvG--gG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~-~~~~ 287 (499)
.. .. ...++|+||| +|.+|+|+|..|.+.+ .+|+++++. .+++... +...
T Consensus 517 ---~~-~~--------~~g~~VvViG~ggG~~g~e~A~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~~ 570 (690)
T 3k30_A 517 ---AG-RL--------PDGKKVVVYDDDHYYLGGVVAELLAQKG--------------YEVSIVTPGAQVSSWTNNTFEV 570 (690)
T ss_dssp ---TT-CC--------CSSSEEEEEECSCSSHHHHHHHHHHHTT--------------CEEEEEESSSSTTGGGGGGTCH
T ss_pred ---CC-CC--------CCCCEEEEEcCCCCccHHHHHHHHHhCC--------------CeeEEEecccccccccccchhH
Confidence 10 11 2345899999 9999999999999887 899999987 4555433 5567
Q ss_pred HHHHHHHHhCCCEEEeC-ceEEEeCCeEEEC-----CCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCCCCCC
Q 010845 288 HYATTQLSKSGVRLVRG-IVKDVDSQKLILN-----DGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRV 360 (499)
Q Consensus 288 ~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~~l~~ 360 (499)
..+.+.|++.||+++++ +|.+++++++.+. +++++++|.||+|+|++|+. +...++. .+. ++
T Consensus 571 ~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~----~~~-------~t 639 (690)
T 3k30_A 571 NRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVA----RRD-------AG 639 (690)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH----HHH-------HT
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh----hhc-------cc
Confidence 78888999999999999 8999999876653 45689999999999999994 4444321 111 55
Q ss_pred CCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 361 PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 361 ~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+.|+|||+|||+. ++.+..|++||+.+|.||...+.
T Consensus 640 -~~~~VyaiGD~~~----------~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 640 -EIASVRGIGDAWA----------PGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp -SCSEEEECGGGTS----------CBCHHHHHHHHHHHHHHTTCCCC
T ss_pred -CCCCEEEEeCCCc----------hhhHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999995 56677899999999999987654
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=2.2e-29 Score=279.53 Aligned_cols=286 Identities=17% Similarity=0.182 Sum_probs=195.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
+++|||||||+||++||..|++.|++|+|||+++.+..+.. . .....+...........+...+....++.++. .+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~-~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-D-TAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-G-SSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-c-CCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 46899999999999999999999999999999887653332 1 00000111000111122222233334677664 488
Q ss_pred EEEECCCCEEEEeeecCccccC------CCceeeeeCCeEEEcCCCCccCCCCCCccc-cCccCCCHHHHHHHHHHHHHH
Q 010845 141 AGIDTDNHVVHCETVTDELRTL------EPWKFKISYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLN 213 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~------~~~~~~i~yd~LViAtG~~~~~~~ipG~~~-~~~~~~~~~~~~~~~~~~~~~ 213 (499)
.+++.+.....++...+..... .+....+.||+||||||+.|+.|++||.+. .++. ..+...+ +. .
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~---~~~~~~~---l~-~ 278 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIML---AGAVRSY---LN-R 278 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEE---HHHHHHH---HH-T
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEE---hHHHHHH---HH-h
Confidence 8888765443333211100000 011247899999999999999999999753 2222 2222111 10 0
Q ss_pred HhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCCCHHHHHHHHH
Q 010845 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATT 292 (499)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~~~~~~~~~~~ 292 (499)
... ...++|+|||+|++|+|+|..|.+.+ .+|+++++.+ +++ . .+
T Consensus 279 --~~~---------~~gk~vvViGgG~~g~E~A~~L~~~G--------------~~Vtvv~~~~~~~~----~-----~~ 324 (965)
T 2gag_A 279 --YGV---------RAGARIAVATTNDSAYELVRELAATG--------------GVVAVIDARSSISA----A-----AA 324 (965)
T ss_dssp --TCE---------ESCSSEEEEESSTTHHHHHHHHGGGT--------------CCSEEEESCSSCCH----H-----HH
T ss_pred --cCC---------CCCCeEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEECCCccch----h-----HH
Confidence 011 12369999999999999999999887 7899999874 432 2 56
Q ss_pred HHHhCCCEEEeC-ceEEEeC--C----eEEECC-------C--cEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeC
Q 010845 293 QLSKSGVRLVRG-IVKDVDS--Q----KLILND-------G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGID 355 (499)
Q Consensus 293 ~l~~~gV~v~~~-~v~~v~~--~----~v~~~~-------g--~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd 355 (499)
.+++.||+++++ .|.+++. + +|++.+ | ++++||.||+++|++|+. ++... +|.|.||
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~vd 398 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDWD 398 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEEE
T ss_pred HHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEEc
Confidence 688999999999 8999875 3 577764 4 689999999999999994 54432 4679999
Q ss_pred CCCC-----CCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 356 EWLR-----VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 356 ~~l~-----~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
++++ + +.|+|||+|||+.. +.. ..|..||+.+|.+|...+.
T Consensus 399 ~~~~~~v~~t-s~p~IyAaGD~a~~---------~~l-~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 399 TTIHAFVPAD-AVANQHLAGAMTGR---------LDT-ASALSTGAATGAAAATAAG 444 (965)
T ss_dssp TTTTEEEECS-CCTTEEECGGGGTC---------CSH-HHHHHHHHHHHHHHHHHTT
T ss_pred CcccccccCC-CCCCEEEEEecCCc---------hhH-HHHHHHHHHHHHHHHHHcC
Confidence 9887 5 89999999999952 333 4899999999999988764
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=6.5e-29 Score=257.53 Aligned_cols=257 Identities=16% Similarity=0.149 Sum_probs=183.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhh-hccCCCCCccccchhhhccccccCCCeEE-EEEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST-CVGTLEFRSVAEPIARIQPAISREPGSYF-FLSH 139 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 139 (499)
+++|||||||+||+++|.+|++. ++|+|||+++++.+....... ..+. .. .....+..+...+ ..++.+ ...+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~-~~-~~~~~~~~l~~~l--~~~v~~~~~~~ 182 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGF-NK-DSRKVVEELVGKL--NENTKIYLETS 182 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTT-TE-EHHHHHHHHHHTC--CTTEEEETTEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCC-CC-CHHHHHHHHHHHH--hcCCEEEcCCE
Confidence 46899999999999999999999 999999999877655322110 1110 00 1111112222223 356665 3468
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccc-cCccCCCHHHHHHHHHHHHHHHhhcC
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSD 218 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (499)
|.+++.+.+.+.+...+++ +...+.||+||+|||+.+..|++||.+. .++ +..++..+.+. + ..
T Consensus 183 v~~i~~~~~~~~~~~~~~~------~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~---~~~~~~~~~~~----~--~~ 247 (493)
T 1y56_A 183 ALGVFDKGEYFLVPVVRGD------KLIEILAKRVVLATGAIDSTMLFENNDMPGVF---RRDFALEVMNV----W--EV 247 (493)
T ss_dssp ECCCEECSSSEEEEEEETT------EEEEEEESCEEECCCEEECCCCCTTTTSTTEE---EHHHHHHHHHT----S--CB
T ss_pred EEEEEcCCcEEEEEEecCC------eEEEEECCEEEECCCCCccCCCCCCCCCCCEE---EcHHHHHHHHh----c--cc
Confidence 8888887775554332111 1247899999999999999999999752 232 23333322211 0 01
Q ss_pred CCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCC
Q 010845 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (499)
Q Consensus 219 ~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~g 298 (499)
...++++|||+|++|+| +.+++.|
T Consensus 248 ---------~~~~~vvViGgG~~gle-----------------------------------------------~~l~~~G 271 (493)
T 1y56_A 248 ---------APGRKVAVTGSKADEVI-----------------------------------------------QELERWG 271 (493)
T ss_dssp ---------CSCSEEEEESTTHHHHH-----------------------------------------------HHHHHHT
T ss_pred ---------CCCCEEEEECCCHHHHH-----------------------------------------------HHHHhCC
Confidence 12369999999999987 2355679
Q ss_pred CEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcch-hcccCCCCC--CCCCcee-eCCCCCCCCCCCeEEe
Q 010845 299 VRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPK--SPGGRIG-IDEWLRVPSVQDVFAV 369 (499)
Q Consensus 299 V~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~--~~~G~i~-vd~~l~~~~~~~Ifa~ 369 (499)
|+++++ .|.+++.+ .+.+++|+++++|.||+|+|.+|+. +++.+++++ +++|+|. ||+++| +.|+|||+
T Consensus 272 V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~ 349 (493)
T 1y56_A 272 IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVA 349 (493)
T ss_dssp CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEEC
T ss_pred cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEE
Confidence 999999 89999764 4778889999999999999999994 888888765 4678887 899999 78999999
Q ss_pred ccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010845 370 GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 406 (499)
Q Consensus 370 GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~ 406 (499)
|||+. +..+..|..||+.+|.+|...+
T Consensus 350 GD~~~----------~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 350 GSAVS----------IKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp STTTC----------CCCHHHHHHHHHHHHHHHHHHT
T ss_pred eccCC----------ccCHHHHHHHHHHHHHHHHHHc
Confidence 99995 3468899999999999998765
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=1.5e-28 Score=256.75 Aligned_cols=291 Identities=13% Similarity=0.123 Sum_probs=189.5
Q ss_pred CCcEEEECCchHHHHHHHhcc-CCCCeEEEEcCCCCcccccchh---hh----hccCC------------CCCcc---cc
Q 010845 62 KPRVVVLGSGWAGCRLMKGID-TSLYDVVCVSPRNHMVFTPLLA---ST----CVGTL------------EFRSV---AE 118 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~-~~g~~V~lie~~~~~~~~~~~~---~~----~~g~~------------~~~~~---~~ 118 (499)
+.+|+|||||+||+++|..|+ +.|++|+|||+++......... .. ..... ..... ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 469999999999999999999 9999999999987543221100 00 00000 00000 00
Q ss_pred chhhhccccccCCCe---EEEEEEEEEEECCCC--EEEEeeecCccccCCCceeeeeCCeEEEcCC--CCccCCCCCCcc
Q 010845 119 PIARIQPAISREPGS---YFFLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (499)
Q Consensus 119 ~~~~~~~~~~~~~~~---~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG--~~~~~~~ipG~~ 191 (499)
.+..+........++ .....+|++++.+++ .+++... ++ .++.||+||+||| +.|..|++||++
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~-~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTD-HG--------EVYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEET-TS--------CEEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEc-CC--------CEEEeCEEEECCcccccCCCCCCCCcc
Confidence 111111111111222 233467888876655 5544431 12 3789999999999 689999999986
Q ss_pred cc---CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 010845 192 EN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (499)
Q Consensus 192 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~ 268 (499)
+. .++.....+ ......++|+|||+|.+|+|+|.+|++.+ .
T Consensus 159 ~f~g~~~~~~~~~~----------------------~~~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 202 (540)
T 3gwf_A 159 TFEGETIHTAAWPE----------------------GKSLAGRRVGVIGTGSTGQQVITSLAPEV--------------E 202 (540)
T ss_dssp GCCSEEEEGGGCCS----------------------SCCCTTSEEEEECCSHHHHHHHHHHTTTC--------------S
T ss_pred ccCCCEEEeecCCC----------------------ccccccceEEEECCCchHHHHHHHHHhhC--------------C
Confidence 42 111111100 01123469999999999999999998876 8
Q ss_pred EEEEEeCC-C-cCCCCCH----HHHHHHH---------------------------------------------------
Q 010845 269 HVTLIEAN-E-ILSSFDD----RLRHYAT--------------------------------------------------- 291 (499)
Q Consensus 269 ~Vtlv~~~-~-~l~~~~~----~~~~~~~--------------------------------------------------- 291 (499)
+||++++. . ++|.+++ ...+.+.
T Consensus 203 ~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~ 282 (540)
T 3gwf_A 203 HLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFM 282 (540)
T ss_dssp EEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHH
T ss_pred EEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhh
Confidence 99999987 4 4554332 2211111
Q ss_pred ----------------------H---------------------------------HHHhCCCEEEe---CceEEEeCCe
Q 010845 292 ----------------------T---------------------------------QLSKSGVRLVR---GIVKDVDSQK 313 (499)
Q Consensus 292 ----------------------~---------------------------------~l~~~gV~v~~---~~v~~v~~~~ 313 (499)
+ .|.+.+|+++. ..|+++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g 362 (540)
T 3gwf_A 283 FGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG 362 (540)
T ss_dssp HTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE
T ss_pred hhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe
Confidence 0 01145899994 4899999999
Q ss_pred EEECCCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCC---------ceeeCCCCCCCCCCCeEEe-ccccccccCCCCC
Q 010845 314 LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGG---------RIGIDEWLRVPSVQDVFAV-GDCSGYLESTGKT 382 (499)
Q Consensus 314 v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G---------~i~vd~~l~~~~~~~Ifa~-GD~a~~~~~~g~~ 382 (499)
|+++||+++++|+||+|||+.++. ++..+++. ..+| .......+.++++||+|++ |..+.
T Consensus 363 v~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~-------- 433 (540)
T 3gwf_A 363 VVTEDGVLHELDVLVFATGFDAVDGNYRRIEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP-------- 433 (540)
T ss_dssp EEETTCCEEECSEEEECCCBSCSSHHHHTSEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB--------
T ss_pred EEcCCCCEEECCEEEECCccCccccCcCcceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC--------
Confidence 999999999999999999999985 55443321 1122 1223333667899999999 87763
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 383 VLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 383 ~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.......+..|++++++.|....+
T Consensus 434 -~~s~~~~~e~q~~~i~~~i~~~~~ 457 (540)
T 3gwf_A 434 -FTNLPPSIETQVEWISDTIGYAER 457 (540)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHH
Confidence 245567899999999999987765
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=2.7e-28 Score=262.30 Aligned_cols=269 Identities=19% Similarity=0.205 Sum_probs=185.9
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
..+++|||||||+||+++|..|++.|++|+|||+++.+.+...+.....+..... ..+..+...+. ..+++++.++
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~gv~~~~~~ 446 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFY---ETLRYYRRMIE-VTGVTLKLNH 446 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHH---HHHHHHHHHHH-HHTCEEEESC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHH---HHHHHHHHHHH-HcCCEEEeCc
Confidence 3468999999999999999999999999999999988776654433322221111 11111111122 2355555433
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeee-eCCeEEEcCCCCccCCCCCCccc-cCccCCCHHHHHHHHHHHHHHHhhc
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKI-SYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLS 217 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i-~yd~LViAtG~~~~~~~ipG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (499)
.. . . ..+ .||+||||||+.|+.|++||.+. .+++ ..+. +...
T Consensus 447 ~v---------~--~------------~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~---~~~~----------l~~~ 490 (671)
T 1ps9_A 447 TV---------T--A------------DQLQAFDETILASGIVPRTPPIDGIDHPKVLS---YLDV----------LRDK 490 (671)
T ss_dssp CC---------C--S------------SSSCCSSEEEECCCEEECCCCCBTTTSTTEEE---HHHH----------HTSC
T ss_pred Ee---------c--H------------HHhhcCCEEEEccCCCcCCCCCCCCCCCcEee---HHHH----------hhCC
Confidence 11 0 0 134 89999999999999999999753 2222 2111 1111
Q ss_pred CCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHH------HHHHh----------------cCCC-CCceEEEEEe
Q 010845 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR------DVRQR----------------YSHV-KDYIHVTLIE 274 (499)
Q Consensus 218 ~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~------~~~~~----------------~~~~-~~~~~Vtlv~ 274 (499)
. ...++|+|||||++|+|+|..|++.+.+ .+.+. +|.. .+..+|++++
T Consensus 491 ~---------~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 561 (671)
T 1ps9_A 491 A---------PVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQ 561 (671)
T ss_dssp C---------CCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEEC
T ss_pred C---------CCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEE
Confidence 1 2346999999999999999999875421 11111 1111 1236899998
Q ss_pred CC-CcC-CCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEE-CCC--cEEeeeEEEEcCCCCcch-hcccCCCCCC
Q 010845 275 AN-EIL-SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLIL-NDG--TEVPYGLLVWSTGVGPST-LVKSLDLPKS 347 (499)
Q Consensus 275 ~~-~~l-~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~-~~g--~~i~~D~vi~a~G~~p~~-~~~~~~l~~~ 347 (499)
+. ..+ ..+++.....+.+.|++.||+++++ +|++++++++.+ .+| +++++|.||+|+|++|+. ++..+
T Consensus 562 ~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l----- 636 (671)
T 1ps9_A 562 RKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPL----- 636 (671)
T ss_dssp SSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHHH-----
T ss_pred ecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHHH-----
Confidence 85 333 4567777888889999999999999 899999988877 677 579999999999999984 44332
Q ss_pred CCCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 010845 348 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 402 (499)
Q Consensus 348 ~~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i 402 (499)
+. ..++||++|||+.. .++.++.|++||..+|.||
T Consensus 637 -----------~~-~g~~v~aiGD~~~~--------~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 -----------ID-SGKTVHLIGGCDVA--------MELDARRAIAQGTRLALEI 671 (671)
T ss_dssp -----------HT-TTCCEEECGGGTCC--------SSCCHHHHHHHHHHHHHHC
T ss_pred -----------Hh-cCCCEEEECCcCcc--------CchhHHHHHHHHHHHHHhC
Confidence 11 23689999999963 2446999999999999885
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=1.7e-27 Score=248.85 Aligned_cols=299 Identities=12% Similarity=0.126 Sum_probs=181.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhh----------------c----------cCCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTC----------------V----------GTLEFR 114 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~----------------~----------g~~~~~ 114 (499)
.+++|||||||+||+++|..|++.|++|+|||+++.+........+. . ......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35799999999999999999999999999999987543221100000 0 000111
Q ss_pred ccccchhhhccccccCCCeEEEEEEEEEEECCCC--EEEEeeecCccccCCCceeeeeCCeEEEcCC--CCccCCCCCCc
Q 010845 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGV 190 (499)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG--~~~~~~~ipG~ 190 (499)
++...+......+.....+ ....+|++++.++. .+.+... ++ .++.||+||+||| +.|+.|++||+
T Consensus 88 ei~~yl~~~~~~~~l~~~i-~~~~~V~~~~~~~~~~~w~V~~~-~G--------~~~~ad~lV~AtG~~s~p~~p~ipG~ 157 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHY-RFNTRVTAARYVENDRLWEVTLD-NE--------EVVTCRFLISATGPLSASRMPDIKGI 157 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGE-ECSCCEEEEEEEGGGTEEEEEET-TT--------EEEEEEEEEECCCSCBC---CCCTTG
T ss_pred HHHHHHHHHHHHcCCcCcE-EECCEEEEEEEeCCCCEEEEEEC-CC--------CEEEeCEEEECcCCCCCCcCCCCCCc
Confidence 1122222222111111122 23457777765443 4444431 12 4799999999999 88999999998
Q ss_pred cccC---ccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 010845 191 KENA---TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (499)
Q Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~ 267 (499)
++.. ++.....+ .....+ .......++|+|||+|++|+|+|.+|++.+
T Consensus 158 ~~f~g~~~h~~~~~~------------~~~~~~---~~~~~~~krV~VIG~G~tgve~a~~la~~~-------------- 208 (545)
T 3uox_A 158 DSFKGESFHSSRWPT------------DAEGAP---KGVDFTGKRVGVIGTGATGVQIIPIAAETA-------------- 208 (545)
T ss_dssp GGCCSEEEEGGGCCB------------CTTSCB---SCCCCBTCEEEEECCSHHHHHHHHHHTTTB--------------
T ss_pred cccCCCeEEcccccc------------cccccc---cccccCCCeEEEECCCccHHHHHHHHHhhC--------------
Confidence 6421 11110000 000000 001124579999999999999999998876
Q ss_pred eEEEEEeCC-C-cCCCCC----HHHHHHH---------------------------------------------------
Q 010845 268 IHVTLIEAN-E-ILSSFD----DRLRHYA--------------------------------------------------- 290 (499)
Q Consensus 268 ~~Vtlv~~~-~-~l~~~~----~~~~~~~--------------------------------------------------- 290 (499)
.+||++++. . ++|..+ +...+.+
T Consensus 209 ~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~ 288 (545)
T 3uox_A 209 KELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIW 288 (545)
T ss_dssp SEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHH
T ss_pred CEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHH
Confidence 899999987 3 454332 1111111
Q ss_pred --------------------------------------------------------HHHHHhCCCEEEe---CceEEEeC
Q 010845 291 --------------------------------------------------------TTQLSKSGVRLVR---GIVKDVDS 311 (499)
Q Consensus 291 --------------------------------------------------------~~~l~~~gV~v~~---~~v~~v~~ 311 (499)
.+.|.+.||+++. ..|++|++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~ 368 (545)
T 3uox_A 289 LSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTP 368 (545)
T ss_dssp HTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEET
T ss_pred HhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEcc
Confidence 1112234889984 48999999
Q ss_pred CeEEECCCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCC----------CCCCCCCCCeEEeccccccccCCC
Q 010845 312 QKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDE----------WLRVPSVQDVFAVGDCSGYLESTG 380 (499)
Q Consensus 312 ~~v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~----------~l~~~~~~~Ifa~GD~a~~~~~~g 380 (499)
++|+++|| ++++|+||+|||+.+++ ++..+++ ...+| ..+++ .+.++++||+|.+.--..
T Consensus 369 ~gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i-~g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~------ 439 (545)
T 3uox_A 369 EGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDI-RGKDN-VRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHN------ 439 (545)
T ss_dssp TEEEESSC-EEECSEEEECCCCBSSSCSCTTSEE-ECGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGG------
T ss_pred CeEEeCCC-eeecCEEEECCccccccccCCCceE-ECCCC-ccHHHhhccccceeeccccCCCCcEEEEeCCCC------
Confidence 99999999 99999999999999863 3322221 12233 23322 245678999999843221
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 381 KTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 381 ~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
..........+..|++++++.|....+
T Consensus 440 ~~~~~s~~~~~e~~~~~i~~~i~~~~~ 466 (545)
T 3uox_A 440 GSTFCNVGVCGGLQAEWVLRMISYMKD 466 (545)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 012356678899999999999987766
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=2.3e-27 Score=248.13 Aligned_cols=291 Identities=15% Similarity=0.158 Sum_probs=184.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchh---hhhc----cC-------------------CCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA---STCV----GT-------------------LEFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~---~~~~----g~-------------------~~~~~ 115 (499)
+++|||||||+||+++|..|++.|++|+|||+++.+....... .... .. ....+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 4799999999999999999999999999999976543221100 0000 00 00011
Q ss_pred cccchhhhccccccCCCeEEEEEEEEEEECCCC--EEEEeeecCccccCCCceeeeeCCeEEEcCC--CCccCCCCCCcc
Q 010845 116 VAEPIARIQPAISREPGSYFFLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (499)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG--~~~~~~~ipG~~ 191 (499)
+...+......+.....+ ....+|++++.+++ .+++... ++ .++.||+||+||| +.|..|.+||++
T Consensus 101 i~~yl~~~~~~~g~~~~i-~~~~~V~~i~~~~~~~~w~V~~~-~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDI-RFDTRVTSAVLDEEGLRWTVRTD-RG--------DEVSARFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHHHTTCGGGE-ECSCCEEEEEEETTTTEEEEEET-TC--------CEEEEEEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHHHcCCCccE-EECCEEEEEEEcCCCCEEEEEEC-CC--------CEEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 111222221111100122 23457888876555 4444431 12 3699999999999 789999999986
Q ss_pred cc---CccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 010845 192 EN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (499)
Q Consensus 192 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~ 268 (499)
+. .++...+.+ .......++|+|||+|.+|+|+|.+|++.+ .
T Consensus 171 ~f~g~~~~~~~~~~---------------------~~~~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 215 (549)
T 4ap3_A 171 RFTGDIVHTARWPH---------------------DGVDFTGKRVGVIGTGSSGIQSIPIIAEQA--------------E 215 (549)
T ss_dssp GCCSEEEEGGGCCT---------------------TCCCCBTCEEEEECCSHHHHHHHHHHHHHB--------------S
T ss_pred cCCCceEEeccccc---------------------cccccCCCEEEEECCCchHHHHHHHHHhhC--------------C
Confidence 42 122111100 000123469999999999999999999876 8
Q ss_pred EEEEEeCC-C-cCCCCCHHHHHHHH-------------------------------------------------------
Q 010845 269 HVTLIEAN-E-ILSSFDDRLRHYAT------------------------------------------------------- 291 (499)
Q Consensus 269 ~Vtlv~~~-~-~l~~~~~~~~~~~~------------------------------------------------------- 291 (499)
+||++++. . ++|..++++.....
T Consensus 216 ~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~ 295 (549)
T 4ap3_A 216 QLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSK 295 (549)
T ss_dssp EEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTT
T ss_pred EEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHh
Confidence 99999987 3 34543322111100
Q ss_pred ---------------------------------H----------------------HHHhCCCEEE---eCceEEEeCCe
Q 010845 292 ---------------------------------T----------------------QLSKSGVRLV---RGIVKDVDSQK 313 (499)
Q Consensus 292 ---------------------------------~----------------------~l~~~gV~v~---~~~v~~v~~~~ 313 (499)
+ .|.+.+|+++ ...|+++++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g 375 (549)
T 4ap3_A 296 AFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG 375 (549)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc
Confidence 0 0223489998 56899999999
Q ss_pred EEECCCcEEeeeEEEEcCCCCcch-hcccCCCCCCCCCceeeCC----------CCCCCCCCCeEEe-ccccccccCCCC
Q 010845 314 LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDE----------WLRVPSVQDVFAV-GDCSGYLESTGK 381 (499)
Q Consensus 314 v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd~----------~l~~~~~~~Ifa~-GD~a~~~~~~g~ 381 (499)
|.++|| ++++|+||+|||+.++. ++..+++ ...+.+.+++ .+.++++||.|.+ |--+.
T Consensus 376 v~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i--~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~------- 445 (549)
T 4ap3_A 376 IVTTGA-HYDLDMIVLATGFDAMTGSLDKLEI--VGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSP------- 445 (549)
T ss_dssp EEESSC-EEECSEEEECCCEEESSTTGGGSEE--ECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSC-------
T ss_pred EEeCCC-ceecCEEEECCcccccccccCceeE--ECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCC-------
Confidence 999999 99999999999999985 5544432 1122233432 2446789999986 32221
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 382 TVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 382 ~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.........+..|++++++.|....+
T Consensus 446 ~~~~s~~~~~e~~~~~i~~~i~~~~~ 471 (549)
T 4ap3_A 446 SVLANMVLHSELHVDWVADAIAYLDA 471 (549)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 11345677889999999998887765
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=3.7e-26 Score=239.74 Aligned_cols=292 Identities=14% Similarity=0.171 Sum_probs=184.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccch---hhhhcc-----------------------CCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL---ASTCVG-----------------------TLEFRS 115 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~---~~~~~g-----------------------~~~~~~ 115 (499)
+.+|+|||||++|+++|..|++.|++|+|||+++.+...... +..... .....+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 479999999999999999999999999999998764321100 000000 000001
Q ss_pred cccchhhhccccccCCCeEEEEEEEEEEECCC--CEEEEeeecCccccCCCceeeeeCCeEEEcCC--CCccCCCCCCcc
Q 010845 116 VAEPIARIQPAISREPGSYFFLSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (499)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~--~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG--~~~~~~~ipG~~ 191 (499)
+...+..+...+.....+. ...+|++++.++ ..+++... ++ .++.||+||+||| +.|..|.+||++
T Consensus 96 i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~-~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~ 165 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGIT-FHTTVTAAAFDEATNTWTVDTN-HG--------DRIRARYLIMASGQLSVPQLPNFPGLK 165 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEE-CSCCEEEEEEETTTTEEEEEET-TC--------CEEEEEEEEECCCSCCCCCCCCCTTGG
T ss_pred HHHHHHHHHHHcCCCceEE-cCcEEEEEEEcCCCCeEEEEEC-CC--------CEEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 1111111111111111222 245777776543 34554431 12 3789999999999 568888999985
Q ss_pred ccC---ccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 010845 192 ENA---TFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (499)
Q Consensus 192 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~ 268 (499)
... ++..... . .......|+|+|||+|.+|+|+|.+|+..+ .
T Consensus 166 ~f~G~~~hs~~~~--------------~-------~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~--------------~ 210 (542)
T 1w4x_A 166 DFAGNLYHTGNWP--------------H-------EPVDFSGQRVGVIGTGSSGIQVSPQIAKQA--------------A 210 (542)
T ss_dssp GCCSEEEEGGGCC--------------S-------SCCCCBTCEEEEECCSHHHHHHHHHHHHHB--------------S
T ss_pred cCCCceEECCCCC--------------C-------chhccCCCEEEEECCCccHHHHHHHHhhcC--------------c
Confidence 321 1111000 0 000124579999999999999999999876 8
Q ss_pred EEEEEeCC-Cc-CCCC----CHHHH-------------------------------------------------------
Q 010845 269 HVTLIEAN-EI-LSSF----DDRLR------------------------------------------------------- 287 (499)
Q Consensus 269 ~Vtlv~~~-~~-l~~~----~~~~~------------------------------------------------------- 287 (499)
+|+++++. .. +|.. .+...
T Consensus 211 ~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~ 290 (542)
T 1w4x_A 211 ELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILA 290 (542)
T ss_dssp EEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGG
T ss_pred eEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHH
Confidence 99999886 33 2321 11110
Q ss_pred ----------------HHHHH-----------------------------------HHHhCCCEEE---eCceEEEeCCe
Q 010845 288 ----------------HYATT-----------------------------------QLSKSGVRLV---RGIVKDVDSQK 313 (499)
Q Consensus 288 ----------------~~~~~-----------------------------------~l~~~gV~v~---~~~v~~v~~~~ 313 (499)
+.+.+ .+.+.+|+++ ...|+++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g 370 (542)
T 1w4x_A 291 AYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG 370 (542)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe
Confidence 00011 1122468887 34899999999
Q ss_pred EEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeC---------CCCCCCCCCCeEEe-ccccccccCCCCC
Q 010845 314 LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGID---------EWLRVPSVQDVFAV-GDCSGYLESTGKT 382 (499)
Q Consensus 314 v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd---------~~l~~~~~~~Ifa~-GD~a~~~~~~g~~ 382 (499)
|+++| +++++|+||||||+.++ .++..+++ ...+|.+..+ ..+.++++||+|++ |+.+..
T Consensus 371 v~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i-~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~------- 441 (542)
T 1w4x_A 371 VRTSE-REYELDSLVLATGFDALTGALFKIDI-RGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS------- 441 (542)
T ss_dssp EEESS-CEEECSEEEECCCCCCTTHHHHTSEE-ECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG-------
T ss_pred EEeCC-eEEecCEEEEcCCccccccCcCceee-ECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCc-------
Confidence 99999 99999999999999996 55554332 2234544443 12566789999998 998731
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 383 VLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 383 ~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
..+..++.|.+|++++|++|....+
T Consensus 442 ~~~~~~~~~e~q~~~ia~~i~~~~~ 466 (542)
T 1w4x_A 442 ALSNMLVSIEQHVEWVTDHIAYMFK 466 (542)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 1256678999999999999998876
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.88 E-value=4.1e-22 Score=178.21 Aligned_cols=150 Identities=25% Similarity=0.354 Sum_probs=128.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcC---------CCC-----CHHHHHHHHHHHHh
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSF-----DDRLRHYATTQLSK 296 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l---------~~~-----~~~~~~~~~~~l~~ 296 (499)
+|+|||||++|+++|..|++.+ .+|+++++. ..+ +.+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999877 899999986 344 233 47888999999999
Q ss_pred CCCEEEeCceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcchhcccCCCCCCCCCceeeCCCCCCCCCCCeEEeccc
Q 010845 297 SGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 372 (499)
Q Consensus 297 ~gV~v~~~~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~ 372 (499)
.||+++.++|++++.+ .+.+++| ++++|.||+|+|.+|+ +.+.++++.+ +|+|.||+++|| +.|+|||+|||
T Consensus 69 ~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~-~g~i~vd~~~~t-~~~~i~a~GD~ 144 (180)
T 2ywl_A 69 YGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR-GAYIDTDEGGRT-SYPRVYAAGVA 144 (180)
T ss_dssp TTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE-TTEECCCTTCBC-SSTTEEECGGG
T ss_pred cCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCCCcc-CceEEeCCCCCc-CCCCEEEeecc
Confidence 9999998888888642 3666777 8999999999999985 5567788888 899999999999 99999999999
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 373 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 373 a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+..+ .++++.|.+||+.+|.||...++
T Consensus 145 ~~~~--------~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 145 RGKV--------PGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp GTCC--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcc--------hhhHHHHHHhHHHHHHHHHHHhh
Confidence 9631 23789999999999999998876
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.84 E-value=1.1e-19 Score=188.49 Aligned_cols=304 Identities=14% Similarity=0.119 Sum_probs=169.3
Q ss_pred CCCCcEEEECCchHHHHHHHhccCC--------------CCeEEEEcCCCCcccccch--hhhhccCC---------CCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTS--------------LYDVVCVSPRNHMVFTPLL--ASTCVGTL---------EFR 114 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~--------------g~~V~lie~~~~~~~~~~~--~~~~~g~~---------~~~ 114 (499)
...+||||||+||+||++|..|.+. +...+.+|+.+.+.|++.+ ++...... ++.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 3457999999999999999888642 3467889999888776432 22111100 000
Q ss_pred ---c----------------------cccchhhhccccccCC--CeEEEEEEEEEEECCC----------CEEEEeeecC
Q 010845 115 ---S----------------------VAEPIARIQPAISREP--GSYFFLSHCAGIDTDN----------HVVHCETVTD 157 (499)
Q Consensus 115 ---~----------------------~~~~~~~~~~~~~~~~--~~~~~~~~v~~id~~~----------~~v~~~~~~~ 157 (499)
. ....+.++...++..- .+. ...+|++|.... ..|++.+...
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vr-f~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~ 195 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVA-YGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET 195 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEE-ESEEEEEEEEECSSTTSSCBCEEEEEEEETTT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceE-cceEEEeeccccccccccccceEEEEEecCCC
Confidence 0 0011222222222222 233 346777775422 2344444222
Q ss_pred ccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHHHHHHHHHHhhcCCCCCCHHHHhccccEEEeC
Q 010845 158 ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 237 (499)
Q Consensus 158 ~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvG 237 (499)
++..++.++.||+|||..|..|+.++....+++...+.+.... +.. +..++|+|+|||
T Consensus 196 ------g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~-------~~~---------~~~~gKrV~VVG 253 (501)
T 4b63_A 196 ------GEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPA-------LLK---------DKSKPYNIAVLG 253 (501)
T ss_dssp ------CCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHH-------HSC---------CTTSCCEEEEEC
T ss_pred ------ceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhh-------ccc---------cccCCcEEEEEC
Confidence 2346789999999999888877665544444444443322211 000 123457999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC---------CCH-----------HHHHHHH-----
Q 010845 238 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS---------FDD-----------RLRHYAT----- 291 (499)
Q Consensus 238 gG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~---------~~~-----------~~~~~~~----- 291 (499)
+|.||+|++.+|++.. +..+|+++.|. .+.|. +.+ .....+.
T Consensus 254 ~G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~ 321 (501)
T 4b63_A 254 SGQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKA 321 (501)
T ss_dssp CSHHHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGG
T ss_pred CcHHHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999998642 12789999986 33321 111 1111110
Q ss_pred ---------------HH-----HH-----hCCCEEEeC-ceEEE------------------eCCeEEECCCcEEeeeEE
Q 010845 292 ---------------TQ-----LS-----KSGVRLVRG-IVKDV------------------DSQKLILNDGTEVPYGLL 327 (499)
Q Consensus 292 ---------------~~-----l~-----~~gV~v~~~-~v~~v------------------~~~~v~~~~g~~i~~D~v 327 (499)
+. +. .....+..+ .+.++ +.+++.+.+|+++++|.|
T Consensus 322 ~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~V 401 (501)
T 4b63_A 322 TNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDAL 401 (501)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEE
T ss_pred hhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEE
Confidence 00 10 001223332 22222 234667788999999999
Q ss_pred EEcCCCCcc--hhcc-cC-CCCCCCCCceeeCCCCCCC-------CCCCeEEeccccccccCCCCCCCCchHHHHHHHHH
Q 010845 328 VWSTGVGPS--TLVK-SL-DLPKSPGGRIGIDEWLRVP-------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 396 (499)
Q Consensus 328 i~a~G~~p~--~~~~-~~-~l~~~~~G~i~vd~~l~~~-------~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~ 396 (499)
|+|||++++ .++. .+ .+..|.+|+..|+.+++.. ..++||+.|-+-.... .+ -|.+...|.+.|+
T Consensus 402 I~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG-~~---~~~Ls~~a~R~~~ 477 (501)
T 4b63_A 402 MVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHG-LS---DSLLSVLAVRGGE 477 (501)
T ss_dssp EECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHC-TT---TTSSTTHHHHHHH
T ss_pred EECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCC-cc---hhhHHHHHHHHHH
Confidence 999999987 2332 22 2455777888888776642 2467999995543221 12 2555667888887
Q ss_pred HHHHHH
Q 010845 397 YLFSLL 402 (499)
Q Consensus 397 ~aa~~i 402 (499)
++..-+
T Consensus 478 I~~~l~ 483 (501)
T 4b63_A 478 MVQSIF 483 (501)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 655433
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.61 E-value=2.9e-15 Score=139.29 Aligned_cols=151 Identities=16% Similarity=0.126 Sum_probs=107.1
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcC-----------------CC-------CCHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-----------------SS-------FDDRL 286 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l-----------------~~-------~~~~~ 286 (499)
+|+|||||++|+++|..|++.+ .+|+++++. ... .. ....+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 7999999999999999999877 899999986 111 00 11366
Q ss_pred HHHHHHHHHhC-CCEEEeCceEEEeC--C---eEEECCCcEEeeeEEEEcCCCCcchh----------------------
Q 010845 287 RHYATTQLSKS-GVRLVRGIVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTL---------------------- 338 (499)
Q Consensus 287 ~~~~~~~l~~~-gV~v~~~~v~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~---------------------- 338 (499)
.+.+.+.+++. |++++..+|+++.. + .|.+++|+++++|.||+|+|..++..
T Consensus 71 ~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~ 150 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLL 150 (232)
T ss_dssp HHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHH
T ss_pred HHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhC
Confidence 77788888887 99999658888753 3 46778888999999999999955421
Q ss_pred --cccCCCCCCCCC--------c-------eeeCC------CCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHH
Q 010845 339 --VKSLDLPKSPGG--------R-------IGIDE------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 395 (499)
Q Consensus 339 --~~~~~l~~~~~G--------~-------i~vd~------~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g 395 (499)
+.+.+++++... . ..+.. .+...++|+|||+|||+ . ..+++.|++||
T Consensus 151 ~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~---------~g~~~~~~~~g 220 (232)
T 2cul_A 151 EDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R---------EGDYARMSEEG 220 (232)
T ss_dssp HHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S---------CCCHHHHHHHH
T ss_pred HHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c---------CccHHHHHHHH
Confidence 122333322111 0 00110 11212899999999999 4 22788899999
Q ss_pred HHHHHHHHHHH
Q 010845 396 KYLFSLLNRIG 406 (499)
Q Consensus 396 ~~aa~~i~~~~ 406 (499)
+.+|.+|...+
T Consensus 221 ~~~a~~i~~~l 231 (232)
T 2cul_A 221 KRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhc
Confidence 99999998754
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.58 E-value=6.7e-17 Score=166.19 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=116.4
Q ss_pred CCeEEEEE-EEEEEECCCCEE---EEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccCccCCCHHHHHHH
Q 010845 131 PGSYFFLS-HCAGIDTDNHVV---HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 206 (499)
Q Consensus 131 ~~~~~~~~-~v~~id~~~~~v---~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~ 206 (499)
.++.++.. +| ++..+++.+ .+.+ . ..++.+|.||+|||..+..+.++... ...+- +...+
T Consensus 132 ~gv~i~~~~~v-~l~~~~~~v~Gv~v~~-~---------~g~~~a~~VVlAtGg~~~~~~~~~~~-~~~tG----dgi~~ 195 (472)
T 2e5v_A 132 EGIPIIEDRLV-EIRVKDGKVTGFVTEK-R---------GLVEDVDKLVLATGGYSYLYEYSSTQ-STNIG----DGMAI 195 (472)
T ss_dssp TTCCEECCCEE-EEEEETTEEEEEEETT-T---------EEECCCSEEEECCCCCGGGSSSBSSC-TTCSC----HHHHH
T ss_pred CCCEEEECcEE-EEEEeCCEEEEEEEEe-C---------CCeEEeeeEEECCCCCcccCccccCC-CCCch----HHHHH
Confidence 56666654 57 887665554 2221 1 12577999999999987665442211 01111 11111
Q ss_pred HHHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCCCCHH
Q 010845 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDR 285 (499)
Q Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~~~~~ 285 (499)
..+.. ...... +..+...+++++|+| +++++..+...+ ..+ +.+.+ ++++.+++.
T Consensus 196 a~~aG--a~~~d~-----e~~q~~p~~~~~ggg--~~~~ae~~~~~G--------------~~~-v~~~g~rf~~~~~~~ 251 (472)
T 2e5v_A 196 AFKAG--TILADM-----EFVQFHPTVTSLDGE--VFLLTETLRGEG--------------AQI-INENGERFLFNYDKR 251 (472)
T ss_dssp HHHTT--CCEECT-----TCEEEEEEEECGGGC--CEECCTHHHHTT--------------CEE-EETTCCCGGGGTCTT
T ss_pred HHHcC--CCEeCC-----cceEEEeEEEccCCC--ceeeehhhcCCc--------------eEE-ECCCCCCCCccCCcc
Confidence 10000 000000 001111245666776 778777776554 555 56565 677655443
Q ss_pred H--------HHHHHHHHHhCCCEEEeC--ceEEEeCCeEEECCCcEEe-eeEEEEcCCCCcchhcccCCCCCCCCCceee
Q 010845 286 L--------RHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGTEVP-YGLLVWSTGVGPSTLVKSLDLPKSPGGRIGI 354 (499)
Q Consensus 286 ~--------~~~~~~~l~~~gV~v~~~--~v~~v~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v 354 (499)
. ...+.+.+++.|. ++.+ .+.+ + .+.++ .|.++++.|..|+..+.-.+......|.|.|
T Consensus 252 ~el~~rd~v~~~i~~~~~~~~~-v~ld~~~~~~-------~--~~~~~~~~~~~~~~G~dp~~~i~v~p~~~~~~GGI~v 321 (472)
T 2e5v_A 252 GELAPRDILSRAIYIEMLKGHK-VFIDLSKIED-------F--ERKFPVVAKYLARHGHNYKVKIPIFPAAHFVDGGIRV 321 (472)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCC-EEEECTTCTT-------H--HHHCHHHHHHHHHTTCCTTSCEECEEEEEEESCEEEC
T ss_pred cCcCchhHHHHHHHHHHHhCCc-EEEeccchHH-------H--HHHhHHHHHHHHHhCcCcccceEeehhhceeCCCeEE
Confidence 2 5666667766664 3332 1110 1 02233 4777888899987221111111234688999
Q ss_pred CCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 355 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 355 d~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
|+++|| +.|+|||+|||+... ..|. ...+..|..+|.+.++.+.
T Consensus 322 d~~~~t-~ipgLyAaGd~a~~~-~hg~---~rl~~~sl~~~~v~G~~a~ 365 (472)
T 2e5v_A 322 NIRGES-NIVNLYAIGEVSDSG-LHGA---NRLASNSLLEGLVFGINLP 365 (472)
T ss_dssp CTTCBC-SSBTEEECGGGEECS-SSTT---SCCTTHHHHHHHHHHHHGG
T ss_pred CCCCcc-ccCCEEecchhcccc-cCCC---CCCCcccHHHHHHHHHHHH
Confidence 999999 999999999998621 1122 2344556666555555443
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.45 E-value=2.2e-14 Score=144.26 Aligned_cols=46 Identities=13% Similarity=0.022 Sum_probs=38.6
Q ss_pred eC-CCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010845 354 ID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 403 (499)
Q Consensus 354 vd-~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~ 403 (499)
+| ++|+++..|++|++|++..+....|+ -..|.|...|..|++++.
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~GG----ynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLGG----YNFQWAWSSAYACALSIS 399 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTTT----HHHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCCC----HHHHHHHHHHHHHHHHHh
Confidence 66 77898889999999999998777774 457889999999998764
No 98
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.2e-15 Score=149.49 Aligned_cols=255 Identities=11% Similarity=-0.017 Sum_probs=138.6
Q ss_pred CCCcEEEECCchHHHHHHHhcc--CCCCeEEEEcCCCCcccccchhhhhccCCCCC-ccccchhhhccccccCCCeEEEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGID--TSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR-SVAEPIARIQPAISREPGSYFFL 137 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~--~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 137 (499)
...||+|||||||||+||.+|+ +.|++|+|||+++......... +...+. .+...+..+.. ..++.+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~----~~~~~~~~l~~~~~~~~~----e~Gv~~~~ 135 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG----GQLFSAMVMRKPAHLFLQ----ELEIPYED 135 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC----STTCCCEEEETTTHHHHH----HTTCCCEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC----CccCCHHHHHHHHHHHHH----HcCCEEEE
Confidence 3469999999999999999996 4699999999988765432221 111111 11122222211 12332211
Q ss_pred EEEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCccccC-ccCCCHHHHHHHHHHHHHHHhh
Q 010845 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLML 216 (499)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 216 (499)
.. ......+.++++++..+..+.++|..... ...... ..
T Consensus 136 ---------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------------~~ 175 (326)
T 3fpz_A 136 ---------------EG-----------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDL--------------VT 175 (326)
T ss_dssp ---------------CS-----------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEE--------------EE
T ss_pred ---------------CC-----------cceecceeEEEEcchhhhccccccceeeccccccee--------------ec
Confidence 00 01233444556666666666777753210 000000 00
Q ss_pred cCCCCCCHHHHhccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHh
Q 010845 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (499)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~ 296 (499)
.. ......++++|+|+|.++++.|..+...+ .+++++.+......... +..
T Consensus 176 ~~------~~~~~~~~v~viggg~~av~~a~~~~~~~--------------~~v~i~~~~~~~~~~~~---------~~~ 226 (326)
T 3fpz_A 176 RP------PTEKGEVTVAGVVTNWTLVTQAHGTQCAM--------------DPNVIELAGYKNDGTRD---------LSQ 226 (326)
T ss_dssp ES------SCSSSSCEEEEEEEEEHHHHTCTTSSSCC--------------CCEEEEESCBCTTSSBC---------TTS
T ss_pred cC------CcccCCCEEEEEccCceeeehhhhhhhcc--------------CcEEEEeeccccccccc---------cee
Confidence 00 00123358999999999999987766554 67888776521111000 000
Q ss_pred CCCEEEeCceEEEeCC-eEEE--CCCcEEeeeEEEEcCCCCcchhcccCCCCCCCCCceeeCCCCCCCCCCCeEEecccc
Q 010845 297 SGVRLVRGIVKDVDSQ-KLIL--NDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 297 ~gV~v~~~~v~~v~~~-~v~~--~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~l~~~~~~~Ifa~GD~a 373 (499)
... .+.+.... .... .....+++|.++.+.|.++.... . ..+.|.+|..++| +.|+|||+||++
T Consensus 227 ~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~-~e~~iv~~~~~~t-~vpGv~aaGDaa 293 (326)
T 3fpz_A 227 KHG-----VILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMN------H-AEHDVVIHSGAYA-GVDNMYFAGMEV 293 (326)
T ss_dssp CCC-----EEEECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHH------H-HHHHHHHHCEECT-TSBTEEECTHHH
T ss_pred ecc-----eEEEEecceeeEeecceeEEEecCceeeecceeccccc------c-cCCeEEECCCeEE-CCCCEEEEchHh
Confidence 000 11111111 0000 01123566777777777765211 1 1245778888898 999999999998
Q ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 374 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 374 ~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
...+. .+...++...++..|+.||+.|.+.+.
T Consensus 294 ~~v~g--~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 294 AELDG--LNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHT--CCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccC--CCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 64321 111122445567889999999998774
No 99
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.11 E-value=1.5e-10 Score=110.80 Aligned_cols=159 Identities=17% Similarity=0.159 Sum_probs=106.0
Q ss_pred cEEEeCcChHHHHHHHHHHHH-HHHHHHHhcCCCCCceEEEEEeCCC-cCCC----------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANE-ILSS---------------------------- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~-~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~---------------------------- 281 (499)
.|+|||||++|+.+|..|++. + .+|+++++.. +...
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G--------------~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPN--------------VQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTT--------------SCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CEEEECccHHHHHHHHHHHHcCC--------------CeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 799999999999999999875 5 8999999863 2110
Q ss_pred ----------CCHHHHHHHHHHHHh-CCCEEEeC-ceEEEe--CC---eEEEC---------CC-----cEEeeeEEEEc
Q 010845 282 ----------FDDRLRHYATTQLSK-SGVRLVRG-IVKDVD--SQ---KLILN---------DG-----TEVPYGLLVWS 330 (499)
Q Consensus 282 ----------~~~~~~~~~~~~l~~-~gV~v~~~-~v~~v~--~~---~v~~~---------~g-----~~i~~D~vi~a 330 (499)
....+...+.+.+.+ .||+++.+ +|.++. ++ ++.+. ++ .++++|.||.|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123444556666655 69999999 888885 33 34442 32 57999999999
Q ss_pred CCCCcc--h----hcccCC--CCCCCCCceeeCC-------CCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHH
Q 010845 331 TGVGPS--T----LVKSLD--LPKSPGGRIGIDE-------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 395 (499)
Q Consensus 331 ~G~~p~--~----~~~~~~--l~~~~~G~i~vd~-------~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g 395 (499)
+|..+. . ....++ +.+.....+.+|. ..++ ..|++|++||++.... |.+...+++..|..+|
T Consensus 187 tG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~--g~~~~gp~~~~~~~sG 263 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEID--GAPRMGPTFGAMMISG 263 (284)
T ss_dssp CCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHH--TCEECCSCCHHHHHHH
T ss_pred CCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhc--CCCCcChHHHHHHHhH
Confidence 998775 2 122222 1122122233332 2344 5799999999875322 2222334567888999
Q ss_pred HHHHHHHHHHHH
Q 010845 396 KYLFSLLNRIGK 407 (499)
Q Consensus 396 ~~aa~~i~~~~~ 407 (499)
+.+|.+|...++
T Consensus 264 ~~~a~~i~~~l~ 275 (284)
T 1rp0_A 264 QKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999998775
No 100
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.10 E-value=2.6e-10 Score=118.78 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=74.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC-Ccccc---cc--------h-hhh--hccC---------CCC----
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN-HMVFT---PL--------L-AST--CVGT---------LEF---- 113 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~-~~~~~---~~--------~-~~~--~~g~---------~~~---- 113 (499)
.++|+|||||+||++||..|++.|.+|+|||++. ..... |. + .+. ..+. ...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5799999999999999999999999999999974 21110 10 0 000 0000 000
Q ss_pred ----Cccc--------cchhh-hccccccCCCeEEEEEEEEEEECCCCEEE-EeeecCccccCCCceeeeeCCeEEEcCC
Q 010845 114 ----RSVA--------EPIAR-IQPAISREPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALG 179 (499)
Q Consensus 114 ----~~~~--------~~~~~-~~~~~~~~~~~~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yd~LViAtG 179 (499)
..+. ..+.. +...+....++.+++++|+.+..+++.+. +.. .+| ..+.+|.||+|||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t-~dG--------~~i~AdaVVLATG 177 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRT-NLG--------VEYKTKAVVVTTG 177 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEE-TTS--------CEEECSEEEECCT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEE-CCC--------cEEEeCEEEEccC
Confidence 0000 00111 11223333588888889999887665442 322 112 3799999999999
Q ss_pred CCccCCCCCCcc
Q 010845 180 AEASTFGIHGVK 191 (499)
Q Consensus 180 ~~~~~~~ipG~~ 191 (499)
+.+..+.++|..
T Consensus 178 ~~s~~~~~~G~~ 189 (637)
T 2zxi_A 178 TFLNGVIYIGDK 189 (637)
T ss_dssp TCBTCEEEETTE
T ss_pred CCccCceeccce
Confidence 988777777753
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.95 E-value=1.2e-09 Score=101.02 Aligned_cols=118 Identities=15% Similarity=0.125 Sum_probs=71.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccc-----------cchhhh-cccccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA-----------EPIARI-QPAISR 129 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~-~~~~~~ 129 (499)
.++|+|||||++|+++|..|++.|.+|+|||++......+..+. .+......+. ..+... ...+..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~--~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPP--KPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCC--CSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcc--ccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999732111100000 0000000000 011121 122333
Q ss_pred CCCeEEEEEEEEEEECCCCEEE-EeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCCc
Q 010845 130 EPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 190 (499)
Q Consensus 130 ~~~~~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG~ 190 (499)
..++.++.++|++++.++..+. +.. .++ .++.+|+||+|+|........+|.
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~-~~g--------~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRT-WEG--------PPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEE-TTS--------CCEECSEEEECCTTCSSCEEEETT
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEE-CCC--------CEEECCEEEECCCCChhhceecCC
Confidence 3478888889999987665542 322 122 379999999999987654444454
No 102
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.92 E-value=1e-09 Score=97.19 Aligned_cols=108 Identities=14% Similarity=0.074 Sum_probs=68.3
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccC---CCCCccccchhhhccccccCCCeEEEEEE
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGT---LEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
++|+|||||++|+++|..|++.|.+|+|||+++.............+. .....+...+.+. +. ..+++++.++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~-~~gv~v~~~~ 77 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAH---AR-RYGAEVRPGV 77 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHH---HH-HTTCEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHH---HH-HcCCEEEeCE
Confidence 689999999999999999999999999999987433210000000000 0111122222222 22 2567777778
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
|++++.++..+.+... + + ++++|+||+|+|..|+.
T Consensus 78 v~~i~~~~~~~~v~~~--~-------g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 78 VKGVRDMGGVFEVETE--E-------G-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CCEEEECSSSEEEECS--S-------C-EEEEEEEEECCTTCCHH
T ss_pred EEEEEEcCCEEEEEEC--C-------C-EEEECEEEECCCCCCCc
Confidence 8888876554444331 1 2 78999999999998753
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.90 E-value=9.6e-10 Score=114.98 Aligned_cols=121 Identities=16% Similarity=0.216 Sum_probs=73.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC-cccc---cchh---------hh--hccC---------CCC---
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLA---------ST--CVGT---------LEF--- 113 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~-~~~~---~~~~---------~~--~~g~---------~~~--- 113 (499)
..++|+|||||+||++||..|++.|.+|+|||++.. .... |... +. ..+. ...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 357999999999999999999999999999998741 1111 1000 00 0000 000
Q ss_pred -----Cccc--------cchhh-hccccccCCCeEEEEEEEEEEECCCCEE-EEeeecCccccCCCceeeeeCCeEEEcC
Q 010845 114 -----RSVA--------EPIAR-IQPAISREPGSYFFLSHCAGIDTDNHVV-HCETVTDELRTLEPWKFKISYDKLVIAL 178 (499)
Q Consensus 114 -----~~~~--------~~~~~-~~~~~~~~~~~~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~~i~yd~LViAt 178 (499)
..+. ..+.. +...+....++.++.++|+.+..+++.| .+.. .+| ..+.+|.||+||
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t-~dG--------~~I~Ad~VVLAT 177 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVT-QMG--------LKFRAKAVVLTV 177 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEE-TTS--------EEEEEEEEEECC
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEE-CCC--------CEEECCEEEEcC
Confidence 0000 00111 1122333258888888999997665543 2322 112 479999999999
Q ss_pred CCCccCCCCCCc
Q 010845 179 GAEASTFGIHGV 190 (499)
Q Consensus 179 G~~~~~~~ipG~ 190 (499)
|+.+..+.++|.
T Consensus 178 Gt~s~~~~i~G~ 189 (651)
T 3ces_A 178 GTFLDGKIHIGL 189 (651)
T ss_dssp STTTCCEEECC-
T ss_pred CCCccCccccCc
Confidence 998877777775
No 104
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.88 E-value=1.1e-09 Score=111.28 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCC--------CCcc-hh--cccCCCCCCC
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTG--------VGPS-TL--VKSLDLPKSP 348 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G--------~~p~-~~--~~~~~l~~~~ 348 (499)
.+...+.+.+++.| +++++ +|++|+.+ .|.+.+|+++.+|.||+|+| +.|+ +. .+.++. ...
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~~~ 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-GHG 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-CCC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-CCC
Confidence 34455556666778 99999 89999753 35667888899999999999 7776 21 111111 112
Q ss_pred CCceeeCCCCCCCCCCCeEEecccc
Q 010845 349 GGRIGIDEWLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 349 ~G~i~vd~~l~~~~~~~Ifa~GD~a 373 (499)
...++|+..+++ ..++||+.||+.
T Consensus 283 ~~~~kv~~~~~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 283 GQGLKILIHVRG-AEAGIECVGDGI 306 (431)
T ss_dssp CCEEEEEEEEES-CCTTEEEEBSSS
T ss_pred cceEEEEEEECC-CCcCceEcCCCC
Confidence 234899999998 679999999984
No 105
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=4.5e-09 Score=108.52 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=70.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc------cchhhhh--------ccCCCCCc---cc-cchhh
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------PLLASTC--------VGTLEFRS---VA-EPIAR 122 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~------~~~~~~~--------~g~~~~~~---~~-~~~~~ 122 (499)
..++|+|||||++|+++|..|++.|++|+|||+++..... +...... .+...... +. ..+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 4579999999999999999999999999999998754311 1000000 00000000 00 11111
Q ss_pred h-ccccccCCCeEEEE-EEEEEEECC---CC--EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCCCCC
Q 010845 123 I-QPAISREPGSYFFL-SHCAGIDTD---NH--VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHG 189 (499)
Q Consensus 123 ~-~~~~~~~~~~~~~~-~~v~~id~~---~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ipG 189 (499)
. ...+.. .++.++. .+|+++..+ .. .|++....++ +..++.+|+||+|+|..+......+
T Consensus 171 ~L~~~~~~-~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g------~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 171 LLLKVALL-LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPA------QLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHH-TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCH------HHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHh-CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCC------CEEEEEcCEEEECCCCCcccccccc
Confidence 1 121222 4676655 588888763 22 4444321011 1136899999999999876554444
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.70 E-value=8.5e-09 Score=106.44 Aligned_cols=146 Identities=19% Similarity=0.193 Sum_probs=98.7
Q ss_pred eCCeEEEcCCCCccCCCCCCcc-ccCccCCCHHHHHHHH-HHHHHHHhhcCCCCCCHHHHhccccEEEeCcChHHHHHHH
Q 010845 170 SYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIR-RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 247 (499)
Q Consensus 170 ~yd~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~vvVvGgG~~gve~A~ 247 (499)
.||.+++++|+.+..+++++.+ +..+......+..++. .++. .... .........+|+|||||++|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRAS----QPVY---QQGQACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHT----SGGG---GGGTTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhc----cccc---cCccccCCCCEEEECccHHHHHHHH
Confidence 5788999999998766665543 3344444555544431 1110 0000 0001123458999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC------CCC----------------------------HHHHHHHHHH
Q 010845 248 ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------SFD----------------------------DRLRHYATTQ 293 (499)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------~~~----------------------------~~~~~~~~~~ 293 (499)
.|++.+ .+|+++++...+. ..+ ..+.+.+.+.
T Consensus 110 ~La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 999877 8999999863211 001 4566677788
Q ss_pred HHhCCCEEEeC-ceEEEeCC-------eEEE--C-CC--cEEeeeEEEEcCCCCcc
Q 010845 294 LSKSGVRLVRG-IVKDVDSQ-------KLIL--N-DG--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 294 l~~~gV~v~~~-~v~~v~~~-------~v~~--~-~g--~~i~~D~vi~a~G~~p~ 336 (499)
+++.||+++.+ +|.+++.+ .|.+ . +| +++.+|.||.|+|..+.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 88899999999 89998642 4556 3 55 57999999999999886
No 107
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.66 E-value=3.8e-07 Score=89.98 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECCC--cEEeeeEEEEcCCCCcchhcccC-CC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDG--TEVPYGLLVWSTGVGPSTLVKSL-DL 344 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~-~l 344 (499)
+..+.+.+.+.+++.|++++.+ +|++++. + .|.+.+| .++.+|.||+|+|.....+...+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCC
Confidence 4578888888999999999988 8988864 2 3566677 48999999999999987776666 54
No 108
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.61 E-value=2.6e-08 Score=100.20 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=33.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
.+++|+|||||+||+++|..|++.|++|+|||+++..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 109
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.61 E-value=6.1e-08 Score=92.42 Aligned_cols=122 Identities=15% Similarity=0.055 Sum_probs=69.8
Q ss_pred CCcEEEECCchHHHHHHHhccCC-CCeEEEEcCCCCcccccchhh--------------hh--ccCCCC---C-----cc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFTPLLAS--------------TC--VGTLEF---R-----SV 116 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~-g~~V~lie~~~~~~~~~~~~~--------------~~--~g~~~~---~-----~~ 116 (499)
+++|+|||||++|+++|..|++. |.+|+|||+++.......... .+ .|.... . ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 46899999999999999999997 999999999875421100000 00 010000 0 00
Q ss_pred ccchhhhccccccCCCeEEEE-EEEEEEECCCCEE---EEeee----cCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 117 AEPIARIQPAISREPGSYFFL-SHCAGIDTDNHVV---HCETV----TDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~-~~v~~id~~~~~v---~~~~~----~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
......+...+....++.++. .+|++++.+...+ .+... .... ...++...+.+|.||+|+|..+..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~-g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHT-QSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTT-SSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCc-cccCceEEEECCEEEECCCCchHH
Confidence 001112222233446787766 5889998766544 33210 0000 000123579999999999987654
No 110
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.61 E-value=1.4e-08 Score=106.21 Aligned_cols=120 Identities=14% Similarity=0.252 Sum_probs=72.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC-cccc---cchh---------hh--hccC---------CCC---
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLA---------ST--CVGT---------LEF--- 113 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~-~~~~---~~~~---------~~--~~g~---------~~~--- 113 (499)
..++|+|||||+||++||..|++.|.+|+|||++.. .... |... .. ..+. ...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 357999999999999999999999999999998741 1111 1100 00 0000 000
Q ss_pred -----Ccc-----cc---chh-hhccccccCCCeEEEEEEEEEEECCCCEEE-EeeecCccccCCCceeeeeCCeEEEcC
Q 010845 114 -----RSV-----AE---PIA-RIQPAISREPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIAL 178 (499)
Q Consensus 114 -----~~~-----~~---~~~-~~~~~~~~~~~~~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yd~LViAt 178 (499)
..+ .. .+. .+...+....++.++.++|+.+..++..|. +.. .++ ..+.+|.||+||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t-~~G--------~~i~Ad~VVLAT 170 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTV-RSG--------RAIQAKAAILAC 170 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEE-TTS--------CEEEEEEEEECC
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEE-CCC--------cEEEeCEEEECc
Confidence 000 00 111 112223333588888889999877666654 332 112 379999999999
Q ss_pred CCCccCCCCCC
Q 010845 179 GAEASTFGIHG 189 (499)
Q Consensus 179 G~~~~~~~ipG 189 (499)
|+.++.+.++|
T Consensus 171 G~~s~~~i~~G 181 (641)
T 3cp8_A 171 GTFLNGLIHIG 181 (641)
T ss_dssp TTCBTCEEEET
T ss_pred CCCCCccceee
Confidence 99876544444
No 111
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.59 E-value=1.4e-07 Score=93.89 Aligned_cols=92 Identities=17% Similarity=0.376 Sum_probs=72.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHH-------------HHHHHHHhC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKS 297 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~-------------~~~~~l~~~ 297 (499)
.+|+|||||+.|+.+|..|...+ .+|+++++.+.++...+.+.. ...+.+++.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~--------------~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~ 75 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKC--------------DDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKN 75 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTC--------------SCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHT
T ss_pred CCEEEEcCcHHHHHHHHHHhCCC--------------CEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHC
Confidence 38999999999999999994332 899999987544322222222 234567789
Q ss_pred CCEEEeC-ceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 298 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 298 gV~v~~~-~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
||+++.+ +|.+++.+ .|++++|+++.+|.+|+|||.+|.
T Consensus 76 ~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp TCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 9999999 89999864 788999999999999999999876
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.56 E-value=4.4e-08 Score=97.50 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=33.4
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 3579999999999999999999999999999998654
No 113
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.52 E-value=6.1e-08 Score=98.24 Aligned_cols=94 Identities=22% Similarity=0.420 Sum_probs=71.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC---CCCC---------HHHHHHHHHHHHhCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSFD---------DRLRHYATTQLSKSG 298 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l---~~~~---------~~~~~~~~~~l~~~g 298 (499)
|+|+|||||+.|+.+|..|++.+ ++.+||+|++.+.. |.++ +++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 48999999999999999998754 23799999987421 2111 111111234566789
Q ss_pred CEEEeCceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 299 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 299 V~v~~~~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
|+++.++|++|+.+ .|++++|+++++|.+|+|||.++.
T Consensus 71 v~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred cEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 99999999999864 799999999999999999998653
No 114
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.52 E-value=2.5e-06 Score=85.36 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
+..+.+.+.+.+++.|++++.+ +|+++.. + .|.+.+| ++.+|.||+|+|...+.+...++
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcC
Confidence 3577788888899999999998 8988863 2 3666677 79999999999988765544443
No 115
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.49 E-value=2.2e-06 Score=92.14 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCc-EEeeeEEEEcCCCCcchhcccCCCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT-EVPYGLLVWSTGVGPSTLVKSLDLP 345 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~-~i~~D~vi~a~G~~p~~~~~~~~l~ 345 (499)
+..+...+.+.+++.|++++.+ +|+++.. + .|.+.+|+ ++.+|.||+|+|.....+....+++
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLP 479 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCCc
Confidence 4577888888899999999998 8988864 3 35666776 8999999999999876555444443
No 116
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.48 E-value=4.7e-07 Score=86.44 Aligned_cols=91 Identities=20% Similarity=0.330 Sum_probs=73.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC----c------CCCC----CHHHHHHHHHHHHhC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE----I------LSSF----DDRLRHYATTQLSKS 297 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~----~------l~~~----~~~~~~~~~~~l~~~ 297 (499)
+|+|||||+.|+.+|..|++.+ .+|+++++.. . ++.. ..++..++.+.+++.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRAR--------------KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERY 69 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999999876 8999999642 1 1111 246777778888876
Q ss_pred -CCEEEeCceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 298 -GVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 298 -gV~v~~~~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++++.++|.+++.+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 70 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 70 PTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred CCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 799887788888654 577888889999999999999875
No 117
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.48 E-value=1.6e-07 Score=94.12 Aligned_cols=95 Identities=25% Similarity=0.253 Sum_probs=71.7
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc--C-CC--------CCHHHHHHHHHHHHhCC
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--L-SS--------FDDRLRHYATTQLSKSG 298 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~--l-~~--------~~~~~~~~~~~~l~~~g 298 (499)
+|||+|||||+.|+.+|..|++.+ ++.+|++|++.+. . |. .+.+....-.+.+.+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 479999999999999999997654 2379999998632 1 11 11111111124466789
Q ss_pred CEEEeCceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 299 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 299 V~v~~~~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
|+++.++|++|+.+ .+++.+|+++++|.+|+|+|.+++
T Consensus 70 v~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 70 IQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccc
Confidence 99999999999864 688999999999999999999876
No 118
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.47 E-value=5.4e-08 Score=97.01 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=33.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
+.+||+||||||||+++|..|++.|++|+|||+++.+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999997654
No 119
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.47 E-value=6.1e-06 Score=81.85 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
+..+.+.+.+.+++.|++++.+ +|++++. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 4577788888899999999998 8988863 22 666666 89999999999998765544333
No 120
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.46 E-value=6.6e-07 Score=89.11 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=56.7
Q ss_pred hcCCCC-CceEEEEEeCC-CcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce--EEECCCcEEeeeEEEEcCC
Q 010845 260 RYSHVK-DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTG 332 (499)
Q Consensus 260 ~~~~~~-~~~~Vtlv~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~--v~~~~g~~i~~D~vi~a~G 332 (499)
.+|.+. +.....++... ..+. +..+...+.+.+++.|++++.+ +|.+++. ++ |.+++| ++.+|.||+|+|
T Consensus 126 ~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G 202 (389)
T 2gf3_A 126 RWPGITVPENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMG 202 (389)
T ss_dssp HSTTCCCCTTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCG
T ss_pred hCCCcccCCCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecC
Confidence 345443 33566676654 2222 3578888889999999999998 8988864 23 445444 799999999999
Q ss_pred CCcchhcccCC
Q 010845 333 VGPSTLVKSLD 343 (499)
Q Consensus 333 ~~p~~~~~~~~ 343 (499)
...+.++..++
T Consensus 203 ~~~~~l~~~~g 213 (389)
T 2gf3_A 203 AWNSKLLSKLN 213 (389)
T ss_dssp GGHHHHGGGGT
T ss_pred ccHHHHhhhhc
Confidence 98776655544
No 121
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.46 E-value=2.6e-07 Score=93.83 Aligned_cols=95 Identities=25% Similarity=0.424 Sum_probs=74.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC---CC---------CCHHHHHHHHHHHHhCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SS---------FDDRLRHYATTQLSKSG 298 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l---~~---------~~~~~~~~~~~~l~~~g 298 (499)
++|+|||||+.|+.+|..|++... .+.+|+++++.+.. |. ...++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 489999999999999999988321 12899999987422 21 11233333566778899
Q ss_pred CEEEeCceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 299 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 299 V~v~~~~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
|+++.+++++++.+ .|.+++|+++.+|.+|+|+|.+|+
T Consensus 74 v~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 74 IHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred CEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 99998899999875 788999999999999999999887
No 122
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.45 E-value=3.7e-07 Score=91.46 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=33.7
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
+.+++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3457999999999999999999999999999999864
No 123
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.45 E-value=9.6e-07 Score=86.53 Aligned_cols=90 Identities=17% Similarity=0.238 Sum_probs=72.2
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c---------------------CCCCC------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I---------------------LSSFD------ 283 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~---------------------l~~~~------ 283 (499)
+|+|||||+.|+.+|..|++.+ .+|+++++.. + ++.++
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 7999999999999999999876 8999999763 2 11111
Q ss_pred -----HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 -----DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 -----~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+++.+.+++.|++++.+ +|.+++. +. |.+++| ++.+|.||+|+|..+.
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 578888888899999999998 8888864 33 666666 8999999999997543
No 124
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.44 E-value=2.7e-07 Score=95.63 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=39.3
Q ss_pred eeeCCCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 352 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 352 i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
|.+|+++++.+.+++|++||++.+ ..-...|..+|..+|+.|...+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~---------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGY---------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCCh---------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 778999998899999999999964 33466788899999999887765
No 125
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.43 E-value=9.6e-07 Score=85.66 Aligned_cols=92 Identities=20% Similarity=0.280 Sum_probs=74.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc------------CCCC-----CHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++..+ .+.+ ..++.+++.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQ 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999999876 89999997621 1222 24677778888
Q ss_pred HHhCCCEEEeCceEEEeCC-------eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 294 LSKSGVRLVRGIVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 294 l~~~gV~v~~~~v~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++.|++++.+++.+++.+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 75 ~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 75 AEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 8899999998888877533 466778889999999999999875
No 126
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.42 E-value=2.7e-07 Score=93.89 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=33.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..++|+|||||++|+++|..|++.|.+|+|||+.+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 347999999999999999999999999999999864
No 127
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.40 E-value=3.6e-07 Score=91.83 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=33.6
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
.++++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45689999999999999999999999999999998653
No 128
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.39 E-value=9.3e-07 Score=86.03 Aligned_cols=94 Identities=21% Similarity=0.270 Sum_probs=75.2
Q ss_pred ccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-----c------------CCCCC-----HHH
Q 010845 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-----I------------LSSFD-----DRL 286 (499)
Q Consensus 229 ~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-----~------------l~~~~-----~~~ 286 (499)
..++|+|||||+.|+.+|..|++.+ .+|+++++.. . +|.++ .++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 86 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSEL 86 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHH
Confidence 3458999999999999999999876 8899999831 0 12332 477
Q ss_pred HHHHHHHHHhCCCEEEeCceEEEeCC--eEEE-----CCCcEEeeeEEEEcCCCCcc
Q 010845 287 RHYATTQLSKSGVRLVRGIVKDVDSQ--KLIL-----NDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 287 ~~~~~~~l~~~gV~v~~~~v~~v~~~--~v~~-----~~g~~i~~D~vi~a~G~~p~ 336 (499)
..++.+.+++.|++++.+.|.+++.+ .+.+ .++.++.+|.+|+|+|..|.
T Consensus 87 ~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 87 MDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 88888999999999998888888764 3444 46778999999999999875
No 129
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.38 E-value=1.2e-06 Score=84.72 Aligned_cols=92 Identities=13% Similarity=0.247 Sum_probs=75.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC---Cc--------CCCC----CHHHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EI--------LSSF----DDRLRHYATTQLS 295 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~---~~--------l~~~----~~~~~~~~~~~l~ 295 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++. .. .|.+ ..++.+++.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999999999876 889999984 11 1222 2467778888888
Q ss_pred hCCCEEEeCceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+.|++++..+|.+++.+ .+.+.+++++.+|.+|+|+|..|.
T Consensus 82 ~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 82 KYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp TTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred HcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 99999998888888654 477778889999999999999876
No 130
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.38 E-value=2.1e-06 Score=82.61 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=72.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce-EEEEEeCCCc------------CCCC-----CHHHHHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~-~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (499)
+|+|||||+.|+.+|..|++.+ . +|+++++... .|.+ ...+.+++.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 7999999999999999998876 7 8999997521 1222 24677778888
Q ss_pred HHhCCCEEEeCceEEEe--CC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 294 LSKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 294 l~~~gV~v~~~~v~~v~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++.|++++..+|.+++ .+ .+.+.+|+++.+|.+|+|+|..|.
T Consensus 69 ~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 69 CFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 88899999987777775 34 466778889999999999998775
No 131
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.36 E-value=1.8e-06 Score=83.03 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=72.7
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEE-EeCCCc------------CCCCC-----HHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEANEI------------LSSFD-----DRLRHYATT 292 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtl-v~~~~~------------l~~~~-----~~~~~~~~~ 292 (499)
++|+|||||+.|+.+|..|++.+ .+|++ +++..+ .|.++ .++..++.+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSE 70 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999876 78999 886321 23333 577888888
Q ss_pred HHHhCCCEEEeCceEEE-eC--CeEE--ECCCcEEeeeEEEEcCCCCcc
Q 010845 293 QLSKSGVRLVRGIVKDV-DS--QKLI--LNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 293 ~l~~~gV~v~~~~v~~v-~~--~~v~--~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.+++.|++++.+++.++ ++ +.+. +.++.++.+|.+|+|+|..|.
T Consensus 71 ~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 71 QCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 119 (315)
T ss_dssp HHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC
Confidence 89999999998888887 54 4454 543338999999999999775
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.36 E-value=3.9e-06 Score=89.95 Aligned_cols=63 Identities=13% Similarity=0.210 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCcEEeeeEEEEcCCCCcchhcccCCCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 345 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~ 345 (499)
+..+...+.+.+++.|++++.+ +|+++.. + .|.+.+|.++.+|.||+|+|.....+....+++
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLP 483 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTCS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCCc
Confidence 3577888888889999999999 8888853 3 355567788999999999999876555444443
No 133
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.36 E-value=3.5e-07 Score=96.03 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..++|+|||||+||+++|..|++.|++|+|||+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 45899999999999999999999999999999985
No 134
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.35 E-value=2.9e-07 Score=92.17 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
+++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 468999999999999999999999999999998654
No 135
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.34 E-value=2e-06 Score=83.45 Aligned_cols=91 Identities=24% Similarity=0.297 Sum_probs=73.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC----------------CCC----CHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l----------------~~~----~~~~~~~~ 290 (499)
++|+|||||+.|+.+|..|++.+ .+|+++++.+.+ +.+ ..++..++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 48999999999999999998866 899999986311 111 25677888
Q ss_pred HHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeEEEEcCCC---Ccc
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGV---GPS 336 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~---~p~ 336 (499)
.+.+++.|++++.+ +|.+++.+ .|.+.+|+ +.+|.||+|+|. .|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 88888899999987 88888643 46677765 999999999999 554
No 136
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.34 E-value=2.6e-07 Score=90.48 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=31.8
Q ss_pred CcEEEECCchHHHHHHHhccC---CCCeEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~---~g~~V~lie~~~~ 96 (499)
++|+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 589999999999999999999 8999999999854
No 137
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.33 E-value=4.2e-06 Score=83.05 Aligned_cols=92 Identities=24% Similarity=0.263 Sum_probs=74.4
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC-----------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 281 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~----------------------------- 281 (499)
.+|+|||||++|+.+|..|++.+ .+|+++++......
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 48999999999999999999877 89999997632110
Q ss_pred ----------------CC-----------HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-eEEECCCcEEeeeEEEEcCC
Q 010845 282 ----------------FD-----------DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-KLILNDGTEVPYGLLVWSTG 332 (499)
Q Consensus 282 ----------------~~-----------~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-~v~~~~g~~i~~D~vi~a~G 332 (499)
++ ..+.+.+.+.+++.||+++.+ +|.+++.+ .|++.+|+++.+|.||.|+|
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG 157 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADG 157 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCC
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCC
Confidence 00 345667778888889999999 88888644 67788899999999999999
Q ss_pred CCcc
Q 010845 333 VGPS 336 (499)
Q Consensus 333 ~~p~ 336 (499)
..+.
T Consensus 158 ~~s~ 161 (379)
T 3alj_A 158 VGSK 161 (379)
T ss_dssp TTCH
T ss_pred ccHH
Confidence 9875
No 138
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.33 E-value=5.6e-07 Score=87.69 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=32.1
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
++|+|||||++|+++|..|++.|++|+|||+++.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 6899999999999999999999999999999864
No 139
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.32 E-value=1e-06 Score=89.12 Aligned_cols=94 Identities=26% Similarity=0.370 Sum_probs=71.4
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCC--------------HHHHHHHHHHHHh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------DRLRHYATTQLSK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~--------------~~~~~~~~~~l~~ 296 (499)
.+|+|||||+.|+.+|..|++.+. +.+|+++++.+.++... ..+.....+.+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGW------------EGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAA 72 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHH
T ss_pred CcEEEEcCHHHHHHHHHHHHccCc------------CCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHh
Confidence 389999999999999999988761 13899999864332110 1111112356778
Q ss_pred CCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.||+++.+ +|..++. ..|.+++|+++.+|.+|+|+|.+|.
T Consensus 73 ~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp TTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc
Confidence 89999998 8999986 4788888999999999999999886
No 140
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.32 E-value=7e-07 Score=89.37 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
.+++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999999865
No 141
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.32 E-value=6.1e-07 Score=90.44 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|||||++|+++|..|++.|++|+|||+++
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3799999999999999999999999999999985
No 142
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.31 E-value=2.1e-06 Score=86.34 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=72.1
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHH-------------HHHHHHHhCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKSG 298 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~-------------~~~~~l~~~g 298 (499)
+|+|||||+.|+.+|..|++.+. +.+|+++++.+.++...+.+.. ...+.+++.|
T Consensus 4 ~vvIIGaG~AGl~aA~~L~~~g~------------~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 71 (410)
T 3ef6_A 4 HVAIIGNGVGGFTTAQALRAEGF------------EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEAR 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------------CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTT
T ss_pred CEEEEcccHHHHHHHHHHHccCc------------CCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCC
Confidence 89999999999999999988761 2469999987543322111211 1234567789
Q ss_pred CEEEeC-ceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 299 VRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 299 V~v~~~-~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
|+++.+ ++..++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 72 i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 72 IDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp CEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc
Confidence 999999 89999865 788899999999999999998876
No 143
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.31 E-value=5.5e-07 Score=90.51 Aligned_cols=92 Identities=17% Similarity=0.259 Sum_probs=72.3
Q ss_pred ccEEEeCcChHHHHHHHHHHH---HHHHHHHHhcCCCCCceEEEEEeCCC-c--CCC---------CCHHHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIHVTLIEANE-I--LSS---------FDDRLRHYATTQLS 295 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~---~~~~~~~~~~~~~~~~~~Vtlv~~~~-~--l~~---------~~~~~~~~~~~~l~ 295 (499)
++|+|||||++|+++|..|++ .+ .+|+++++.+ . .+. ..+++...+.+.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g--------------~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK--------------ADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALP 67 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG--------------SEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC--------------CeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHh
Confidence 379999999999999999988 33 8999999863 1 111 12234445667778
Q ss_pred hCCCEEEeCceEEEeCC--eEEECCCc----EEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRGIVKDVDSQ--KLILNDGT----EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~~v~~v~~~--~v~~~~g~----~i~~D~vi~a~G~~p~ 336 (499)
+.||+++.++|.+++.+ .|++.+++ ++++|.+|+|+|.+|+
T Consensus 68 ~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 68 EKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp GGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred hCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 88999998899999865 78887775 3999999999999886
No 144
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.29 E-value=2e-06 Score=89.15 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=78.9
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c-------------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I------------------------------- 278 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~------------------------------- 278 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++++ +
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 48999999999999999999876 8899998752 1
Q ss_pred -----C------CCC------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----
Q 010845 279 -----L------SSF------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 312 (499)
Q Consensus 279 -----l------~~~------------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~---- 312 (499)
+ +.+ ...+.+.+.+.+++.|++++.+ +|+++..+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 0345566777788899999999 89888532
Q ss_pred -eEEECCCcEEeeeEEEEcCCCCcch---hcccCCCCCC
Q 010845 313 -KLILNDGTEVPYGLLVWSTGVGPST---LVKSLDLPKS 347 (499)
Q Consensus 313 -~v~~~~g~~i~~D~vi~a~G~~p~~---~~~~~~l~~~ 347 (499)
+|++.+|+++.||.||+|+|..+.. .+...++...
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 4778899999999999999999962 4455565543
No 145
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.29 E-value=3.6e-06 Score=81.91 Aligned_cols=91 Identities=16% Similarity=0.223 Sum_probs=71.8
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC----------------CCC----CHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l----------------~~~----~~~~~~~~ 290 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++.+.+ +.+ ..++.+++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 48999999999999999998765 899999986311 111 25667777
Q ss_pred HHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCc
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
.+.+++.+++++.+ +|.+++.+ .|.+.+|+++.+|.||+|+|..+
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 78888889999888 88887653 36667788899999999999953
No 146
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.28 E-value=5.7e-06 Score=81.45 Aligned_cols=91 Identities=21% Similarity=0.226 Sum_probs=73.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC--------C--------CC----CHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL--------S--------SF----DDRLRHYA 290 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l--------~--------~~----~~~~~~~~ 290 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++.+.+ | .+ ..++.+.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 48999999999999999998766 899999985311 1 11 15677778
Q ss_pred HHHHHhCCCEEEeC-ceEEEeCC-----eEEECCCcEEeeeEEEEcCCCCc
Q 010845 291 TTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 291 ~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
.+.+++.+++++.+ +|.+++.+ .|.+.+|+++.+|.+|+|+|..+
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 88888899999988 88888642 47777888999999999999943
No 147
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.28 E-value=4.1e-07 Score=85.37 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=33.5
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~ 98 (499)
.+|+|||||||||+||..|++.|++|+|||+++...
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 589999999999999999999999999999987654
No 148
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.26 E-value=2.7e-06 Score=81.77 Aligned_cols=91 Identities=16% Similarity=0.203 Sum_probs=73.0
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC---CcC--------CC----CCHHHHHHHHHHHHh
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------SS----FDDRLRHYATTQLSK 296 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~---~~l--------~~----~~~~~~~~~~~~l~~ 296 (499)
+|+|||||+.|+.+|..|++.+ .+|+++++. ... +. ..+.+.+++.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKG--------------IRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999998866 789999752 111 11 124677788888889
Q ss_pred CCCEEEeC-ceEEEeCC-------eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.|++++.+ +|..++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 99999999 89999642 466778889999999999998875
No 149
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.26 E-value=5.3e-07 Score=90.01 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
+++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 469999999999999999999999999999998743
No 150
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=1.2e-06 Score=91.24 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=32.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999998864
No 151
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.24 E-value=9.1e-06 Score=85.21 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 469999999999999999999999999999998654
No 152
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.23 E-value=5.7e-07 Score=91.05 Aligned_cols=94 Identities=22% Similarity=0.393 Sum_probs=71.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC---C---------CHHHHHHHHHHHHhCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS---F---------DDRLRHYATTQLSKSG 298 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~---~---------~~~~~~~~~~~l~~~g 298 (499)
++|+|||||+.|+.+|..|++.+ .+.+|+++++.+.+.. + ..++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 38999999999999999998732 1289999998742211 0 1112222334566789
Q ss_pred CEEEeCceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 299 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 299 V~v~~~~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
|+++.+++..++.+ .|.+++++++.+|.+|+|+|.+|+
T Consensus 71 v~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred CEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc
Confidence 99998899999875 688889999999999999999876
No 153
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.21 E-value=2.3e-06 Score=85.77 Aligned_cols=94 Identities=22% Similarity=0.354 Sum_probs=72.1
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCC--------------CHHHHHHHHHHHHh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLSK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~--------------~~~~~~~~~~~l~~ 296 (499)
++|+|||||+.|+.+|..|++.+. +.+|+++++.+.++.. ...+.....+.+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~------------~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 69 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY------------PGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQD 69 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------------CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHH
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc------------CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHh
Confidence 489999999999999999988761 1389999986432211 11122233456778
Q ss_pred CCCEEEeCceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.+|+++..++.+++.+ .+.+.+|+++.+|.+|+|||.+|.
T Consensus 70 ~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 111 (404)
T 3fg2_P 70 QAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR 111 (404)
T ss_dssp TTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC
T ss_pred CCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc
Confidence 8999998888888764 688899999999999999998775
No 154
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.21 E-value=1.6e-06 Score=90.75 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
.++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 47999999999999999999999999999998754
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.21 E-value=1.9e-06 Score=88.14 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|||+.+.+.-. ...++...+.+. +. ..+++++. .+|
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~---l~-~~gV~i~~~~~v 233 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-----------GDPETAALLRRA---LE-KEGIRVRTKTKA 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------cCHHHHHHHHHH---HH-hcCCEEEcCCEE
Confidence 478999999999999999999999999999998753210 011111222222 22 25777765 488
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
+.++.+.+.+.+....+. .++..++++|.||+|+|..|+...
T Consensus 234 ~~i~~~~~~~~v~~~~~~----~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 234 VGYEKKKDGLHVRLEPAE----GGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEEEETTEEEEEEEETT----CCSCEEEEESEEEECSCEEESCTT
T ss_pred EEEEEeCCEEEEEEeecC----CCceeEEEcCEEEECCCcccCCCC
Confidence 888876655444321110 011237899999999999987653
No 156
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.21 E-value=5.9e-06 Score=80.45 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=73.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc------------CCCC-----CHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++... .|.+ .+++.+++.+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQ--------------LAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTT--------------CCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998876 78999985311 1222 24677778888
Q ss_pred HHhCCCEEEeCceEEEeCC---eE-EECCCcEEeeeEEEEcCCCCcc
Q 010845 294 LSKSGVRLVRGIVKDVDSQ---KL-ILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 294 l~~~gV~v~~~~v~~v~~~---~v-~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++.|++++.+.+.+++.+ .| .+++|+++.+|.+|+|+|..|.
T Consensus 81 ~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 81 ALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 8889999998888877752 46 6778889999999999998775
No 157
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.21 E-value=1.3e-06 Score=89.04 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=69.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+.+.- .. ...+...+.+. +.+ .+++++. .+|
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~--~~---------~~~~~~~l~~~---l~~-~Gv~i~~~~~V 231 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP--TM---------DLEVSRAAERV---FKK-QGLTIRTGVRV 231 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--TS---------CHHHHHHHHHH---HHH-HTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc--cc---------CHHHHHHHHHH---HHH-CCCEEEECCEE
Confidence 47899999999999999999999999999999876321 00 01111122222 222 4677765 488
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
+.++.+.+.+.+... ++ .++++|.||+|+|..|+...
T Consensus 232 ~~i~~~~~~v~v~~~-~g--------~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 232 TAVVPEAKGARVELE-GG--------EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEEEEETTEEEEEET-TS--------CEEEESEEEECSCEEECCTT
T ss_pred EEEEEeCCEEEEEEC-CC--------eEEEcCEEEECcCCCcCCCC
Confidence 888876666655431 12 47999999999999987643
No 158
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.20 E-value=2.9e-06 Score=86.42 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=32.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
+++|+|||||+||+++|..|++.|++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 37999999999999999999999999999999864
No 159
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.20 E-value=2.3e-06 Score=86.98 Aligned_cols=101 Identities=19% Similarity=0.213 Sum_probs=68.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SH 139 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (499)
..++|+|||||++|+.+|..|++.|.+|+|+|+.+.+.... . ..++...+.+. + ...+++++. .+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------~-~~~~~~~l~~~---l-~~~gv~i~~~~~ 213 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------L-DKEFTDVLTEE---M-EANNITIATGET 213 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------C-CHHHHHHHHHH---H-HTTTEEEEESCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------C-CHHHHHHHHHH---H-HhCCCEEEcCCE
Confidence 45799999999999999999999999999999987532110 0 11111222222 2 336788877 47
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
|+.++.+.+...+.. ++ .++++|.||+|+|..|+.+
T Consensus 214 v~~i~~~~~v~~v~~--~~--------~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 214 VERYEGDGRVQKVVT--DK--------NAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp EEEEECSSBCCEEEE--SS--------CEEECSEEEECSCEEESCG
T ss_pred EEEEEccCcEEEEEE--CC--------CEEECCEEEECcCCCCChH
Confidence 888887643212221 11 3789999999999988754
No 160
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.20 E-value=4.1e-06 Score=84.17 Aligned_cols=89 Identities=19% Similarity=0.297 Sum_probs=69.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC----------------------------CC-
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------SF- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~----------------------------~~- 282 (499)
+|+|||||++|+.+|..|++.+ .+|+++++.+... .+
T Consensus 29 dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 8999999999999999999877 8899998753210 00
Q ss_pred ------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCcE
Q 010845 283 ------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTE 321 (499)
Q Consensus 283 ------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~~ 321 (499)
...+.+.+.+.+++.||+++.+ +|++++. + .|.+.+| +
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 1245666777788889999998 8888853 3 3556666 8
Q ss_pred EeeeEEEEcCCCCc
Q 010845 322 VPYGLLVWSTGVGP 335 (499)
Q Consensus 322 i~~D~vi~a~G~~p 335 (499)
+.+|.||+|+|..+
T Consensus 174 i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 VDAASLVVASGGKS 187 (417)
T ss_dssp EEESEEEECCCCSS
T ss_pred EEeeEEEECCCCcc
Confidence 99999999999987
No 161
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.19 E-value=4e-06 Score=84.40 Aligned_cols=94 Identities=24% Similarity=0.351 Sum_probs=72.9
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCC--------------CHHHHHHHHHHHHh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLSK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~--------------~~~~~~~~~~~l~~ 296 (499)
++|+|||||+.|+.+|..|++.+. +.+|+++++.+.++.. ...+.....+.+++
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~------------~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 77 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGF------------EGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWED 77 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC------------CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHH
T ss_pred CcEEEECChHHHHHHHHHHHccCc------------CCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHH
Confidence 489999999999999999988761 1459999986432211 12222233566778
Q ss_pred CCCEEEeC-ceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.||+++.+ ++..++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 78 ~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 78 KAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR 120 (415)
T ss_dssp TTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC
T ss_pred CCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC
Confidence 99999999 89999875 688889999999999999998876
No 162
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.19 E-value=1e-05 Score=79.78 Aligned_cols=90 Identities=16% Similarity=0.310 Sum_probs=69.2
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce-EEEEEeCCCc--------------CCC-------C-------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI--------------LSS-------F------- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~-~Vtlv~~~~~--------------l~~-------~------- 282 (499)
+|+|||||+.|+.+|..|++.+ . +|+++++..+ .+. +
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 7999999999999999998866 6 8999987530 000 0
Q ss_pred ---------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 283 ---------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 283 ---------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
...+..++.+.+++.|++++.+ +|.+++.+ .|.+.++ ++.+|.||+|+|..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 0345566777778899999998 78888753 3555565 6899999999999765
No 163
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.18 E-value=6.2e-06 Score=79.64 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=71.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc------------CCCC----CHHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF----DDRLRHYATTQL 294 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~------------l~~~----~~~~~~~~~~~l 294 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++... .|.+ ..++.+.+.+.+
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSG--------------FSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHA 82 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHH
Confidence 48999999999999999999876 88999997421 1221 245667777888
Q ss_pred HhCCCEEEeCceEEEe--CC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 295 SKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 295 ~~~gV~v~~~~v~~v~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
++.|++++.+++.+++ .+ .|.+ +++++.+|.+|+|+|..|.
T Consensus 83 ~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 83 ANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp HTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred HHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 8899999887777775 34 3544 6678999999999998775
No 164
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.18 E-value=1.3e-06 Score=90.38 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 4799999999999999999999999999999986
No 165
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.18 E-value=4.9e-06 Score=85.77 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=33.7
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..+++|+|||||++||++|..|++.|++|+|||+.+..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 34579999999999999999999999999999988643
No 166
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.17 E-value=4.1e-06 Score=84.07 Aligned_cols=94 Identities=26% Similarity=0.373 Sum_probs=70.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHH-HHHH---------HHHhCCCE
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-YATT---------QLSKSGVR 300 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~-~~~~---------~l~~~gV~ 300 (499)
.+|+|||||+.|+.+|..|++.+. +.+|+++++...++...+.+.. .+.. .+++.||+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 75 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGY------------QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVE 75 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTC------------CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCE
T ss_pred CcEEEECChHHHHHHHHHHHccCC------------CCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCE
Confidence 489999999999999999988761 1369999987533321111111 1110 35567999
Q ss_pred EEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 301 LVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 301 v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
++.+ +|..++. ..|.+++|+++.+|.+|+|||.+|.
T Consensus 76 ~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 76 WLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp EEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred EEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 9999 6999986 4788888989999999999999886
No 167
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.15 E-value=4.9e-06 Score=80.87 Aligned_cols=91 Identities=19% Similarity=0.232 Sum_probs=72.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeC----C-Cc------------CCCC-----CHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA----N-EI------------LSSF-----DDRLRH 288 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~----~-~~------------l~~~-----~~~~~~ 288 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++ . .. .|.+ ..++.+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAE--------------LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTD 74 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHH
Confidence 48999999999999999999876 88999987 2 11 1222 246777
Q ss_pred HHHHHHHhCCCEEEeCceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 289 YATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 289 ~~~~~l~~~gV~v~~~~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+++.|++++.+.+.+++.+ .|.+ +++++.+|.+|+|+|.+|.
T Consensus 75 ~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 75 KFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 778888899999998888888653 3555 7788999999999999875
No 168
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.15 E-value=3.2e-06 Score=81.75 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=32.7
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~ 97 (499)
.++|+|||||++|+++|..|++. |++|+|||+.+..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 47999999999999999999986 9999999998654
No 169
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.15 E-value=8.2e-06 Score=78.70 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=72.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc------------CCCC-----CHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++... .|.+ .+++.+++.+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARAN--------------LQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEH 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998866 78999985311 1222 24677777888
Q ss_pred HHhCCCEEEeCceEEEeCC--eEE-ECCCcEEeeeEEEEcCCCCcc
Q 010845 294 LSKSGVRLVRGIVKDVDSQ--KLI-LNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 294 l~~~gV~v~~~~v~~v~~~--~v~-~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++.|++++.+.+..++.+ .+. +.+++++.+|.+|+|+|..|.
T Consensus 72 ~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 72 ATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 8899999998888888753 333 567889999999999998775
No 170
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.14 E-value=1.2e-05 Score=77.27 Aligned_cols=91 Identities=23% Similarity=0.315 Sum_probs=72.0
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc----C-------------CCC-----CHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L-------------SSF-----DDRLRHY 289 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~----l-------------~~~-----~~~~~~~ 289 (499)
.|+|||||+.|+.+|..+++.+ .+|+++++... + |.+ ++++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 6999999999999999999877 88999987421 0 122 2467777
Q ss_pred HHHHHHhCCCEEEeCceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 290 ATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+++.++++....+.....+ .+.+.++.++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 88888999999988866665443 456678889999999999998875
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.14 E-value=4.5e-06 Score=83.03 Aligned_cols=100 Identities=24% Similarity=0.367 Sum_probs=68.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. .....+...+.+. +. ..++.++.+ +|
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~---l~-~~gv~i~~~~~v 210 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAG---LE-GLGVRFHLGPVL 210 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHH---HH-TTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHH---HH-HcCCEEEeCCEE
Confidence 578999999999999999999999999999998753211 0011111222222 22 357777664 78
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
+.++.+.+.+.+... ++ .++++|.||+|+|..|+.
T Consensus 211 ~~i~~~~~~~~v~~~-~g--------~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 211 ASLKKAGEGLEAHLS-DG--------EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEEEEETTEEEEEET-TS--------CEEEESEEEECSCEEECC
T ss_pred EEEEecCCEEEEEEC-CC--------CEEECCEEEECcCCCcCH
Confidence 888766555544431 12 379999999999988765
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=5.6e-06 Score=84.38 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=69.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. . ..++...+.+. +. ..++.++. .+|
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~-~~~~~~~l~~~---l~-~~gv~i~~~~~v 234 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG----------F-EKQMAAIIKKR---LK-KKGVEVVTNALA 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------S-CHHHHHHHHHH---HH-HTTCEEEESEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------c-CHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 478999999999999999999999999999998753210 0 01111222222 22 25777766 588
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++.+...+.+....++ +..++++|.||+|+|..|+..
T Consensus 235 ~~i~~~~~~~~v~~~~~g------~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 235 KGAEEREDGVTVTYEANG------ETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEEEEETTEEEEEEEETT------EEEEEEESEEEECSCEEESCS
T ss_pred EEEEEeCCeEEEEEEeCC------ceeEEEcCEEEECcCCCcccC
Confidence 888866554444321111 135799999999999998764
No 173
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.13 E-value=3.9e-06 Score=86.51 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=33.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..++|+|||||++||++|..|++.|++|+|||+.+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4579999999999999999999999999999987643
No 174
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.12 E-value=2.7e-06 Score=89.36 Aligned_cols=36 Identities=28% Similarity=0.268 Sum_probs=33.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..+|||||||+|||++|..|++.|++|+|||+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999998654
No 175
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.12 E-value=1.5e-05 Score=79.70 Aligned_cols=90 Identities=18% Similarity=0.263 Sum_probs=69.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC-----------------CC------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL-----------------SS------------ 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l-----------------~~------------ 281 (499)
+|+|||||++|+.+|..+++.+ .+|+++++.+ +. ..
T Consensus 6 dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 7999999999999999999876 7889988753 20 00
Q ss_pred -----------------------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEe-C-----Ce--EEEC
Q 010845 282 -----------------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVD-S-----QK--LILN 317 (499)
Q Consensus 282 -----------------------------------~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~-~-----~~--v~~~ 317 (499)
....+.+.+.+.+++.||+++.+ +|+++. + +. |.++
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~ 151 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN 151 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC
Confidence 12345566777788899999998 888875 2 33 4455
Q ss_pred CCcEEeeeEEEEcCCCCcc
Q 010845 318 DGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 318 ~g~~i~~D~vi~a~G~~p~ 336 (499)
++ ++.+|.||+|+|..+.
T Consensus 152 ~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 152 ST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp TE-EEEESEEEECCCCSSC
T ss_pred CC-EEECCEEEECCCCccC
Confidence 55 7999999999999984
No 176
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.11 E-value=1e-05 Score=77.61 Aligned_cols=91 Identities=19% Similarity=0.289 Sum_probs=66.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc----C---CC-------CCHHHHHHHHHHHHhC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L---SS-------FDDRLRHYATTQLSKS 297 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~----l---~~-------~~~~~~~~~~~~l~~~ 297 (499)
.|+|||+|+.|+.+|..+++.+ .+|+++++... . +. .++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 6999999999999999998876 89999997521 1 11 1345666666666665
Q ss_pred C-CEEEeCceEEEeC---C--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 298 G-VRLVRGIVKDVDS---Q--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 298 g-V~v~~~~v~~v~~---~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+ +.++...+..+.. + .+.+.+|+++.+|.||+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 4 5566555555532 1 577889999999999999999875
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.11 E-value=1.1e-05 Score=83.76 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=74.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC---CcC--------C----CCCHHHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------S----SFDDRLRHYATTQLS 295 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~---~~l--------~----~~~~~~~~~~~~~l~ 295 (499)
.+|+|||||+.|+.+|..+++.+ .+|+++++. ... + ...+++...+.+.++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999876 789999752 111 0 123567788888899
Q ss_pred hCCCEEEeC-ceEEEeCC-------eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~-------~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+.||+++.+ +|.+++.+ .|.+++|+++.+|.+|+|+|.+|.
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 999999999 89999642 477788889999999999998775
No 178
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.07 E-value=1.7e-06 Score=86.32 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=31.9
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 6899999999999999999999999999998763
No 179
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.06 E-value=7.3e-06 Score=83.36 Aligned_cols=94 Identities=27% Similarity=0.440 Sum_probs=66.1
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-------CC------CHHHHHHHHHHH-Hh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-------SF------DDRLRHYATTQL-SK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~-------~~------~~~~~~~~~~~l-~~ 296 (499)
++|+|||||+.|+.+|..|++.+ ++.+|+++++.+.+. .+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998762 127999999874221 11 111222222334 67
Q ss_pred CCCEEEeC-ceEEEeCCe--EEECCC-cEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQK--LILNDG-TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~~--v~~~~g-~~i~~D~vi~a~G~~p~ 336 (499)
.||+++.+ ++..++.+. +.+.++ .++.+|.+|+|||.+|.
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC
T ss_pred cCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC
Confidence 89999999 899998763 555566 48999999999998875
No 180
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.06 E-value=1.6e-06 Score=89.55 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECCCcEEeeeEEEEcCCCC
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVG 334 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~ 334 (499)
..+.+.+.+.+++.|++|+++ +|++|.. + +|+++||+++.||.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 467788888999999999999 8999853 3 5889999999999999988754
No 181
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1e-05 Score=79.96 Aligned_cols=90 Identities=32% Similarity=0.486 Sum_probs=67.7
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCH-------------HHHHHHHHHHHhC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD-------------RLRHYATTQLSKS 297 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~-------------~~~~~~~~~l~~~ 297 (499)
.+++|||||+.|+.+|..|++. + +|+++++.+.++...+ ++.....+.+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~--------------g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT--------------Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhc--------------C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhC
Confidence 4899999999999999998642 2 8999998743221111 1112234566778
Q ss_pred CCEEEeC-ceEEEeCC--eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 298 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 298 gV~v~~~-~v~~v~~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
||+++.+ ++..++.+ .|. .+|+++.+|.+|+|||.+|.
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~ 114 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR 114 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC
Confidence 9999999 79999865 455 67889999999999999886
No 182
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.04 E-value=1.3e-05 Score=81.93 Aligned_cols=90 Identities=22% Similarity=0.415 Sum_probs=68.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------------------------------- 280 (499)
+|+|||||+.|+.+|..+++.+ .+|+++++..+..
T Consensus 6 dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 71 (463)
T 2r9z_A 6 DLIAIGGGSGGLAVAEKAAAFG--------------KRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGV 71 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTB
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCc
Confidence 7999999999999999998866 8999999864210
Q ss_pred -----CCC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 281 -----SFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 281 -----~~~-~-----------~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+ + .+...+.+.+++.||+++.+.+..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 72 QASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPI 143 (463)
T ss_dssp CCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCC
Confidence 000 0 11122334457789999999777788888888 7788999999999998876
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.03 E-value=9.3e-06 Score=83.28 Aligned_cols=105 Identities=16% Similarity=0.211 Sum_probs=69.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. + + .++...+.+. +. ..+++++. .+|
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--~--------~-~~~~~~l~~~---l~-~~gv~i~~~~~v 247 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--M--------D-GEVAKATQKF---LK-KQGLDFKLSTKV 247 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--S--------C-HHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--c--------C-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 478999999999999999999999999999998753210 0 0 1111222222 22 25777766 488
Q ss_pred EEEEC--CCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDT--DNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~--~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++. +.+.+.+...+. ..++..++++|.||+|+|..|+..
T Consensus 248 ~~i~~~~~~~~~~v~~~~~----~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDT----KTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEETTTTEEEEEEEET----TTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEEEecCCCeEEEEEEEc----CCCCceEEECCEEEECCCCCcCCC
Confidence 88876 555443322100 001135799999999999998764
No 184
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.03 E-value=2e-05 Score=78.75 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=69.8
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------------------------------- 280 (499)
+|+|||||++|+.+|..|++.+ .+|+++++.....
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 73 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGR 73 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCE
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCC
Confidence 7999999999999999999866 6666666531110
Q ss_pred ------------------------------CCCHHHHHHHHHHHHhC-CCEEEeC-ceEEEeCC------eEEECCCcEE
Q 010845 281 ------------------------------SFDDRLRHYATTQLSKS-GVRLVRG-IVKDVDSQ------KLILNDGTEV 322 (499)
Q Consensus 281 ------------------------------~~~~~~~~~~~~~l~~~-gV~v~~~-~v~~v~~~------~v~~~~g~~i 322 (499)
.....+.+.+.+.+++. |++++.+ +|++++.+ .|++++|+++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 74 VRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp EECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 00124566677777777 9999998 89888642 5677888899
Q ss_pred eeeEEEEcCCCCcc
Q 010845 323 PYGLLVWSTGVGPS 336 (499)
Q Consensus 323 ~~D~vi~a~G~~p~ 336 (499)
.+|.||.|+|..+.
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999999875
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.01 E-value=2e-05 Score=80.14 Aligned_cols=91 Identities=25% Similarity=0.466 Sum_probs=69.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC----------------------------C
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------F 282 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~----------------------------~ 282 (499)
.+|+|||||+.|+.+|..+++.+ .+|++++++++... +
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~ 70 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYG--------------QKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDY 70 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhc
Confidence 37999999999999999998766 89999998642100 0
Q ss_pred ---------C------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 283 ---------D------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 283 ---------~------------~~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+ ..+...+.+.+++.||+++.+.+..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 71 g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 144 (450)
T 1ges_A 71 GFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPS 144 (450)
T ss_dssp TEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred CccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCC
Confidence 0 011112234457789999999777788888888 7788999999999998875
No 186
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.00 E-value=6.3e-06 Score=84.64 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=68.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. . ..++...+.+. +. ..+++++.+ +|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------~-~~~~~~~l~~~---l~-~~gV~i~~~~~v 249 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------A-DRDLVKVWQKQ---NE-YRFDNIMVNTKT 249 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------S-CHHHHHHHHHH---HG-GGEEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------c-CHHHHHHHHHH---HH-hcCCEEEECCEE
Confidence 578999999999999999999999999999998763210 0 11111222222 22 257777664 88
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
..++.+.+.+.+...+.+ +++.++.+|.||+|+|..|+.
T Consensus 250 ~~i~~~~~~~~v~~~~~~-----~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 250 VAVEPKEDGVYVTFEGAN-----APKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEEETTEEEEEEESSS-----CCSSCEEESCEEECCCEEECG
T ss_pred EEEEEcCCeEEEEEeccC-----CCceEEEcCEEEECcCCCcCC
Confidence 888766554433321100 001368899999999998875
No 187
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.00 E-value=1.9e-05 Score=80.32 Aligned_cols=94 Identities=16% Similarity=0.261 Sum_probs=68.1
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC----CCC----------HHHHHHHHHHHHh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----SFD----------DRLRHYATTQLSK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~----~~~----------~~~~~~~~~~l~~ 296 (499)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.++ .+. .++.....+.+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~------------~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY------------PQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRR 70 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSSEEEEECSSSCCSSCCC----------------CCCCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHH
Confidence 38999999999999999998762 128999999874222 110 1111113466788
Q ss_pred CCCEEEeC-ceEEEeCC--eEEE---CCCcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQ--KLIL---NDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~--~v~~---~~g~~i~~D~vi~a~G~~p~ 336 (499)
.|++++.+ +|.+++.+ .+.+ .+++++.+|.+|+|||.+|.
T Consensus 71 ~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF 116 (452)
T ss_dssp TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC
T ss_pred CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC
Confidence 99999988 89998764 5555 25568999999999999886
No 188
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.00 E-value=6.1e-06 Score=85.54 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=68.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
+++++|||||+.|+..|..+++.|.+|||+++...+. . . ..++...+.+. +.. .++.++.+ .+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~------~-----~-D~ei~~~l~~~---l~~-~gi~~~~~~~v 286 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR------G-----F-DQQCAVKVKLY---MEE-QGVMFKNGILP 286 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST------T-----S-CHHHHHHHHHH---HHH-TTCEEEETCCE
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc------c-----c-chhHHHHHHHH---HHh-hcceeecceEE
Confidence 4789999999999999999999999999998754211 0 0 11222223332 222 56776654 67
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
..+......+.+...+ ...+.+|.|++|+|-+|+..
T Consensus 287 ~~~~~~~~~~~v~~~~---------~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 287 KKLTKMDDKILVEFSD---------KTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEEEETTEEEEEETT---------SCEEEESEEEECSCEEESCG
T ss_pred EEEEecCCeEEEEEcC---------CCeEEEEEEEEcccccCCcc
Confidence 7777777776665422 13678999999999998864
No 189
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.99 E-value=1.8e-05 Score=81.31 Aligned_cols=91 Identities=23% Similarity=0.275 Sum_probs=72.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------------------------------- 280 (499)
.|+|||||+.|+.+|..|++.+ .+|+++++..+-.
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~ 93 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALG--------------KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGW 93 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTB
T ss_pred CEEEECcCHHHHHHHHHHHhCc--------------CEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCc
Confidence 7999999999999999999887 8999999843210
Q ss_pred -----CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEEC-CCcEEeeeEEEEcCCCCcc
Q 010845 281 -----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 281 -----~~~------------~~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~-~g~~i~~D~vi~a~G~~p~ 336 (499)
.++ ..+...+.+.+++.||+++.+.+..++...+.+. +++++.+|.+|+|||..|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 94 KYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcc
Confidence 000 1223344556778899999998888888889887 7889999999999998876
No 190
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=8.5e-06 Score=83.48 Aligned_cols=106 Identities=20% Similarity=0.227 Sum_probs=68.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-.. .+ .++...+.+. +. ..+++++. .+|
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------~~-~~~~~~l~~~---l~-~~Gv~i~~~~~v 243 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG---------ID-MEISKNFQRI---LQ-KQGFKFKLNTKV 243 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS---------CC-HHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc---------cC-HHHHHHHHHH---HH-HCCCEEEeCceE
Confidence 4789999999999999999999999999999987642100 00 1111122222 22 25777765 588
Q ss_pred EEEECCCCE-EEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHV-VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~-v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++.+.+. +.+..... ..++..++++|.||+|+|..|+..
T Consensus 244 ~~i~~~~~~~~~v~~~~~----~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAA----SGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEECTTSCEEEEEEET----TSCCCEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCceEEEEEEec----CCCCceEEEcCEEEECcCCCcCCC
Confidence 888765533 43331100 001125799999999999998764
No 191
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.99 E-value=1e-05 Score=83.31 Aligned_cols=99 Identities=17% Similarity=0.284 Sum_probs=67.6
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-E
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (499)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. .. ..++...+.+. + ...+++++.+ +
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~~-~~~~~~~l~~~---l-~~~GV~i~~~~~ 258 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG---------YY-DRDLTDLMAKN---M-EEHGIQLAFGET 258 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------TS-CHHHHHHHHHH---H-HTTTCEEEETCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh---------HH-HHHHHHHHHHH---H-HhCCeEEEeCCE
Confidence 3578999999999999999999999999999998753210 00 01111222222 2 2357887764 7
Q ss_pred EEEEECCCC--EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 140 CAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 140 v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
|+.++.+.+ .+.+ + + .++++|.||+|+|..|+..
T Consensus 259 v~~i~~~~~v~~v~~-~---g--------~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 259 VKEVAGNGKVEKIIT-D---K--------NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEEEECSSSCCEEEE-S---S--------CEEECSEEEECCCEEECCG
T ss_pred EEEEEcCCcEEEEEE-C---C--------cEEECCEEEECCCCCcChH
Confidence 888876443 2333 1 2 3799999999999988754
No 192
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.99 E-value=4.6e-05 Score=73.20 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=69.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc----C--------CCC----CHHHHHHHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L--------SSF----DDRLRHYATTQLS 295 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~----l--------~~~----~~~~~~~~~~~l~ 295 (499)
.|+|||||+.|+.+|..+++.+ .+|++++++.+ + |.+ .+++.....+...
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 6999999999999999999877 89999997531 1 222 2466667777778
Q ss_pred hCCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+.++.+..+ .+..... ..+...+++++.+|.+|+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred hccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC
Confidence 888888877 4333332 3566677889999999999998876
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=3.8e-05 Score=78.24 Aligned_cols=91 Identities=22% Similarity=0.357 Sum_probs=68.5
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC-------------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------------------------- 279 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l------------------------------- 279 (499)
.+|+|||||+.|+.+|..+++.+ .+|++++++.+-
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~ 71 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLG--------------IPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPS 71 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhccccc
Confidence 48999999999999999998876 899999985320
Q ss_pred -CCC-------C-HHH-----------HHHHHHHHHhCCCEEEeCceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 280 -SSF-------D-DRL-----------RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 280 -~~~-------~-~~~-----------~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+ + +++ .....+.+++.||+++.+....+++..|.+++ +++.+|.+|+|||.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~ 147 (458)
T 1lvl_A 72 PLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSV 147 (458)
T ss_dssp TTCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEEC
T ss_pred ccCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCC
Confidence 000 1 011 11123566788999999965557777888876 78999999999999885
No 194
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.98 E-value=2.3e-05 Score=81.58 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=71.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC--------C-------------CC------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------S-------------SF------ 282 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l--------~-------------~~------ 282 (499)
.+|+|||||++|+.+|..|.+.+ .+|+++++.. +. | .+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 48999999999999999998866 7999999842 21 0 01
Q ss_pred ----------CHHHHHHHHHHHHhCCC--EEEeC-ceEEEe--CC----eEEECCCcEEeeeEEEEcCCC
Q 010845 283 ----------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 283 ----------~~~~~~~~~~~l~~~gV--~v~~~-~v~~v~--~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+++.+++.+.+++.|+ +++.+ +|.+++ ++ .|.+.+|+++.+|.||+|+|.
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 14677788888888898 78888 888874 34 688889999999999999994
No 195
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.98 E-value=1e-05 Score=84.86 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=33.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
...+|||||||++||++|..|++.|++|+|||+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3468999999999999999999999999999998654
No 196
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.98 E-value=7.9e-06 Score=84.11 Aligned_cols=94 Identities=21% Similarity=0.361 Sum_probs=67.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHH--------HH-----------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY--------AT----------- 291 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~--------~~----------- 291 (499)
.+|+|||||+.|+.+|..|.+.. .+.+|+++++.+.++...+.++.. ..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~------------~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~ 79 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARD------------PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGK 79 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHS------------TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSC
T ss_pred CCEEEECChHHHHHHHHHHHhcC------------CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccc
Confidence 48999999999999999997652 128999999874332111100000 00
Q ss_pred ---------------HH---HHhCCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 292 ---------------TQ---LSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 292 ---------------~~---l~~~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+. +.+.||+++.+ +|.+++. ..|.+++|+++.+|.+|+|||.+|.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 80 ERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp EEESBSSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cccccccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 00 12468999998 8998874 5788999999999999999999886
No 197
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.98 E-value=5.8e-05 Score=74.81 Aligned_cols=90 Identities=21% Similarity=0.330 Sum_probs=62.7
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-CcCCC------C----------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS------F---------------------- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l~~------~---------------------- 282 (499)
.|+|||||++|.-+|..|++.+ .+|+++|+. .+-.. +
T Consensus 6 DViIVGaGpaGl~~A~~La~~G--------------~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 5999999999999999999977 677777753 11000 0
Q ss_pred -----------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEe--CCeEE---E-CCC--cEEee
Q 010845 283 -----------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQKLI---L-NDG--TEVPY 324 (499)
Q Consensus 283 -----------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~--~~~v~---~-~~g--~~i~~ 324 (499)
...+...+.+...+.|++++.+ ++.++. ++.+. . .++ .++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 0234556666777889999988 776653 33222 2 233 36899
Q ss_pred eEEEEcCCCCc
Q 010845 325 GLLVWSTGVGP 335 (499)
Q Consensus 325 D~vi~a~G~~p 335 (499)
|+||-|.|...
T Consensus 152 ~~vIgAdG~~S 162 (397)
T 3oz2_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred eEEEeCCcccc
Confidence 99999999764
No 198
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.96 E-value=1e-05 Score=82.65 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=68.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. . ..++...+.+. +. ..+++++. .+|
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~-~~~~~~~l~~~---l~-~~gv~i~~~~~v 235 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------E-DADVSKEIEKQ---FK-KLGVTILTATKV 235 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------S-CHHHHHHHHHH---HH-HHTCEEECSCEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc----------c-CHHHHHHHHHH---HH-HcCCEEEeCcEE
Confidence 478999999999999999999999999999998753210 0 01111122222 22 24677766 478
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++.+...+.+....++ +..++++|.+|+|+|..|+..
T Consensus 236 ~~i~~~~~~~~v~~~~~g------~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 236 ESIADGGSQVTVTVTKDG------VAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp EEEEECSSCEEEEEESSS------CEEEEEESEEEECSCEEECCS
T ss_pred EEEEEcCCeEEEEEEcCC------ceEEEEcCEEEECCCCCccCC
Confidence 888765543433321111 125799999999999998764
No 199
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.96 E-value=2.4e-05 Score=81.27 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=70.4
Q ss_pred ccEEEeCcChHHHHHHHHHH-HHHHHHHHHhcCCCCCceEEEEEeCCC-cC--------CC-------------C-----
Q 010845 231 LHCVVVGGGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------SS-------------F----- 282 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~-~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l--------~~-------------~----- 282 (499)
.+|+|||||++|+.+|..|+ +.+ .+|+++++.. +. |. +
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G--------------~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELG--------------LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC--------------CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCC--------------CCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 38999999999999999998 655 7899999852 21 11 1
Q ss_pred -----------CHHHHHHHHHHHHhCCC--EEEeC-ceEEEe--CC----eEEECCCcEEeeeEEEEcCCC
Q 010845 283 -----------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 283 -----------~~~~~~~~~~~l~~~gV--~v~~~-~v~~v~--~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+++.+++.+.+++.|+ +++.+ +|.+++ ++ .|.+++|+++.+|.||+|+|.
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 23567778888888898 78887 788775 33 578889999999999999995
No 200
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.96 E-value=2.6e-05 Score=78.89 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=65.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHH---------------HHHHHHHHh
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR---------------HYATTQLSK 296 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~---------------~~~~~~l~~ 296 (499)
||+|||||+.|+.+|..|++.+ .+.+|+++++++..+.....+. ....+.+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLD------------KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDR 69 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHC------------SSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCC------------CCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHh
Confidence 7999999999999999998765 2268999998642221111111 112344567
Q ss_pred CCCEEEeC-ceEEEeCC--eEEECC-----CcEEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQ--KLILND-----GTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~--~v~~~~-----g~~i~~D~vi~a~G~~p~ 336 (499)
.||+++.+ +|..++.+ .+.+.+ +.++.+|.+|+|||.+|+
T Consensus 70 ~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred cCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 89999998 89999764 344322 246899999999999876
No 201
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.95 E-value=2.5e-05 Score=79.71 Aligned_cols=92 Identities=20% Similarity=0.355 Sum_probs=67.8
Q ss_pred ccEEEeCcChHHHHHHHHHHH---HHHHHHHHhcCCCCCceE---EEEEeCC-CcC------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIH---VTLIEAN-EIL------------------------ 279 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~---~~~~~~~~~~~~~~~~~~---Vtlv~~~-~~l------------------------ 279 (499)
++|+|||||++|+.+|..|++ .+ .+ |+++++. .+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--------------~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~ 68 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--------------AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYR 68 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--------------CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--------------CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCcccc
Confidence 389999999999999999987 44 66 9999975 221
Q ss_pred -------------CCC---------------CHHHHHHHHHHHHhCCCE--EEeC-ceEEEeC--C----eEEECC---C
Q 010845 280 -------------SSF---------------DDRLRHYATTQLSKSGVR--LVRG-IVKDVDS--Q----KLILND---G 319 (499)
Q Consensus 280 -------------~~~---------------~~~~~~~~~~~l~~~gV~--v~~~-~v~~v~~--~----~v~~~~---g 319 (499)
+.+ ...+.+++.+.+++.|++ ++.+ +|.+++. + .|++.+ |
T Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 69 YLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD 148 (464)
T ss_dssp TCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT
T ss_pred chhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC
Confidence 000 034566777777888998 8877 7888753 3 566654 4
Q ss_pred --cEEeeeEEEEcCC--CCcc
Q 010845 320 --TEVPYGLLVWSTG--VGPS 336 (499)
Q Consensus 320 --~~i~~D~vi~a~G--~~p~ 336 (499)
.++.+|.||+|+| ..|.
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEESEEEECCCSSSSBC
T ss_pred ceEEEEcCEEEECCCCCCCCc
Confidence 5789999999999 5554
No 202
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.95 E-value=3.9e-05 Score=77.87 Aligned_cols=90 Identities=21% Similarity=0.345 Sum_probs=69.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC--------------------C----C-----
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------------------S----F----- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~--------------------~----~----- 282 (499)
.|+|||||++|+.+|..|++.+ .+|+++++..... . +
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~ 93 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR 93 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG
T ss_pred CEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH
Confidence 7999999999999999999876 7888888652110 0 0
Q ss_pred ---------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEe--CC---eEEEC
Q 010845 283 ---------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQ---KLILN 317 (499)
Q Consensus 283 ---------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~--~~---~v~~~ 317 (499)
...+.+.+.+.+++.||+++.+ +|.++. ++ +|.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 94 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp GGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred HHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 1234455666777899999998 888875 33 36778
Q ss_pred CCcEEeeeEEEEcCCCCc
Q 010845 318 DGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 318 ~g~~i~~D~vi~a~G~~p 335 (499)
+|+++.+|.||+|+|..+
T Consensus 174 ~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 174 TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TCCEEECSCEEECCCCSS
T ss_pred CCCEEECCEEEECCCCCc
Confidence 888899999999999988
No 203
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.94 E-value=6.9e-06 Score=83.52 Aligned_cols=88 Identities=19% Similarity=0.212 Sum_probs=68.0
Q ss_pred ccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c-------CCC--CCHHHHHHHHHHHHhCC
Q 010845 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-------LSS--FDDRLRHYATTQLSKSG 298 (499)
Q Consensus 229 ~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~-------l~~--~~~~~~~~~~~~l~~~g 298 (499)
..++|+|||||+.|+.+|..|++.+ .+|+++++.+ + +|. ++.++.....+.+++.|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~g 186 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAG 186 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence 4568999999999999999999877 8899999863 3 233 35677778888899999
Q ss_pred CEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCc
Q 010845 299 VRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 299 V~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
|+++.+ .|. ..+.++++ .+.+|.||+|+|..+
T Consensus 187 v~~~~~~~v~----~~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 187 VIYHPNFEVG----RDASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp CEEETTCCBT----TTBCHHHH-HSSCSEEEECCCCCE
T ss_pred cEEEeCCEec----cEEEhhHh-HhhCCEEEEecCCCC
Confidence 999988 442 22333333 357999999999974
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.94 E-value=1.6e-05 Score=81.73 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=68.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .+ ..++...+.+. +.. . +.++. .+|
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~~---------d~~~~~~l~~~---l~~-~-V~i~~~~~v 237 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--LQ---------DEEMKRYAEKT---FNE-E-FYFDAKARV 237 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--CC---------CHHHHHHHHHH---HHT-T-SEEETTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--cC---------CHHHHHHHHHH---Hhh-C-cEEEECCEE
Confidence 57899999999999999999999999999999876421 00 01111222222 222 3 56553 477
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
..++.+++.+.+...+. .++..++++|.||+|+|..|+...
T Consensus 238 ~~i~~~~~~v~v~~~~~-----~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 238 ISTIEKEDAVEVIYFDK-----SGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEEEECSSSEEEEEECT-----TCCEEEEEESEEEECSCCEESCSS
T ss_pred EEEEEcCCEEEEEEEeC-----CCceEEEECCEEEEeeCCccCCCC
Confidence 78876555444433210 012357999999999999987653
No 205
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.93 E-value=2.4e-05 Score=79.79 Aligned_cols=96 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC--------------------------C----
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------------------------S---- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~--------------------------~---- 281 (499)
+|+|||||+.|+.+|..|++.+... .+ .+|+++++...+. .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999876210 00 4799998753110 0
Q ss_pred ----------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC---------eEEECCCc----EEeee
Q 010845 282 ----------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---------KLILNDGT----EVPYG 325 (499)
Q Consensus 282 ----------------------~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~---------~v~~~~g~----~i~~D 325 (499)
...++.+++....++.+++++.+ +|.+++.+ .|.+.+|+ ++.+|
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d 182 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR 182 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC
Confidence 01234455555566778999998 78887643 45556665 89999
Q ss_pred EEEEcCCCCcc
Q 010845 326 LLVWSTGVGPS 336 (499)
Q Consensus 326 ~vi~a~G~~p~ 336 (499)
.||+|+|..|.
T Consensus 183 ~lVlAtG~~p~ 193 (463)
T 3s5w_A 183 ALVVSPGGTPR 193 (463)
T ss_dssp EEEECCCCEEC
T ss_pred EEEECCCCCCC
Confidence 99999999775
No 206
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.93 E-value=3.3e-05 Score=78.55 Aligned_cols=93 Identities=24% Similarity=0.258 Sum_probs=68.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCC----------------CHHHHHHHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF----------------DDRLRHYATTQLS 295 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~----------------~~~~~~~~~~~l~ 295 (499)
+|+|||||+.|+.+|..|++.. ++.+|+++++.+.++.. ..++.....+.++
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~------------~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 69 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH------------PDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELS 69 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHH
Confidence 6999999999999999998861 12899999987422111 1112222345677
Q ss_pred hCCCEEEeC-ceEEEe--CCeEEECC-----CcEEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRG-IVKDVD--SQKLILND-----GTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~--~~~v~~~~-----g~~i~~D~vi~a~G~~p~ 336 (499)
+.||+++.+ ++..++ .+.+.+.+ ++++.+|.+|+|+|.+|.
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 889999888 788886 35677653 467999999999998876
No 207
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.93 E-value=3.7e-05 Score=78.03 Aligned_cols=85 Identities=11% Similarity=0.049 Sum_probs=64.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCe-EEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEEE
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~-V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (499)
..++|+|||||.+|+.+|..|++.+.+ |+|+++.+.+ + ...++. ....
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------------l-----------------~~~~i~-~~~~ 259 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------------I-----------------QNESLQ-QVPE 259 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS-------------C-----------------BCSSEE-EECC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc-------------C-----------------CCCCeE-EecC
Confidence 357899999999999999999999999 9999998653 0 012343 2456
Q ss_pred EEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 140 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
|+.++.+...|++.+ | ...+.+|.||+|||..|+.+-
T Consensus 260 v~~~~~~~~~v~~~d---G-------~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 260 ITKFDPTTREIYLKG---G-------KVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEEEETTTTEEEETT---T-------EEECCCSEEEECCCBCCCCCC
T ss_pred eEEEecCCCEEEECC---C-------CEeccCCEEEECCCCCcCCCC
Confidence 777765666777654 2 124789999999999988655
No 208
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.93 E-value=3.1e-05 Score=80.55 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=70.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC--------C---------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------S--------------------- 280 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l--------~--------------------- 280 (499)
.+|+|||||++|+.+|..|.+.+ .+|+++++.. +. |
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 37999999999999999998765 7899999863 20 1
Q ss_pred --C------CCHHHHHHHHHHHHhCCC--EEEeC-ceEEEeC--C----eEEECCCcEEeeeEEEEcCCC
Q 010845 281 --S------FDDRLRHYATTQLSKSGV--RLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 281 --~------~~~~~~~~~~~~l~~~gV--~v~~~-~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
. -.+++.+++.+..++.|+ +++.+ +|.+++- + .|++++|+++.||.||+|+|.
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 0 125677788888888887 67777 7887752 3 678889999999999999994
No 209
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.92 E-value=8.5e-06 Score=84.05 Aligned_cols=91 Identities=22% Similarity=0.370 Sum_probs=58.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC---------C----------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S---------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l---------~---------------------- 280 (499)
+|+|||||+.|+.+|..+++.+ .+|++++++++. |
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~ 69 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHN--------------AKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGF 69 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTC
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCC
Confidence 7999999999999999999876 899999987421 0
Q ss_pred ----CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEECC-------------CcEEeeeEEEEcC
Q 010845 281 ----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILND-------------GTEVPYGLLVWST 331 (499)
Q Consensus 281 ----~~~------------~~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~~~-------------g~~i~~D~vi~a~ 331 (499)
.++ ..+...+.+.+++.||+++.+.+..++...+.+.+ ++++.+|.+|+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAt 149 (500)
T 1onf_A 70 DTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAV 149 (500)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECC
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECC
Confidence 001 11122233456788999998855555555666644 6689999999999
Q ss_pred CCCcc
Q 010845 332 GVGPS 336 (499)
Q Consensus 332 G~~p~ 336 (499)
|.+|.
T Consensus 150 Gs~p~ 154 (500)
T 1onf_A 150 GNKPV 154 (500)
T ss_dssp CCCBC
T ss_pred CCCCC
Confidence 99886
No 210
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.92 E-value=3.8e-05 Score=76.04 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
.+.+.+.+.+++.|++++.+ +|.+++.+ .|.+.+| ++.+|.||+|+|.....+...++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC
Confidence 45666777888899999998 88888643 3556666 89999999999998765555544
No 211
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.92 E-value=1.9e-05 Score=80.79 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=60.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC-------CCC-------CHHH-------HHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SSF-------DDRL-------RHY 289 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l-------~~~-------~~~~-------~~~ 289 (499)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.+ |.+ ...+ ...
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~------------~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~ 71 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD------------PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRD 71 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC------------TTSEEEEECCC----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccC
Confidence 48999999999999999998762 12899999987421 111 1111 112
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC--eEEECC---Cc--EEeeeEEEEcCCCCcc
Q 010845 290 ATTQLSKSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 290 ~~~~l~~~gV~v~~~-~v~~v~~~--~v~~~~---g~--~i~~D~vi~a~G~~p~ 336 (499)
.....++.|++++.+ +|.+++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 126 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN 126 (472)
T ss_dssp ---------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC
Confidence 222223579999988 89998764 566654 65 7999999999998875
No 212
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.91 E-value=4.1e-05 Score=73.56 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=32.2
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~ 97 (499)
.+|+|||||++|+++|..|++. |++|+|+|+++..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 4899999999999999999987 9999999997654
No 213
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.90 E-value=1.4e-05 Score=81.65 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=68.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- .+ ..++...+.+. +....+++++. .+|
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~---------d~~~~~~l~~~---l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--TL---------DEDVTNALVGA---LAKNEKMKFMTSTKV 239 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--TS---------CHHHHHHHHHH---HHHHTCCEEECSCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--cC---------CHHHHHHHHHH---HhhcCCcEEEeCCEE
Confidence 47899999999999999999999999999999876421 00 01111222222 20225777776 488
Q ss_pred EEEECCCCEEEEeeec-CccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHVVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~-~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++.+.+.+.+.... ++ +..++++|.||+|+|..|+..
T Consensus 240 ~~i~~~~~~~~v~~~~~~g------~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNG------KRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCeEEEEEEcCCC------ceEEEECCEEEECCCcccCCC
Confidence 8887655433332110 11 124799999999999998764
No 214
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.88 E-value=9.8e-05 Score=70.92 Aligned_cols=159 Identities=15% Similarity=0.193 Sum_probs=96.4
Q ss_pred cEEEeCcChHHHHHHHHHHHH--HHHHHHHhcCCCCCceEEEEEeCCCcCC-C---------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEILS-S--------------------------- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~--~~~~~~~~~~~~~~~~~Vtlv~~~~~l~-~--------------------------- 281 (499)
+|+|||+|++|+.+|..|++. + .+|+++++..... .
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g--------------~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~ 132 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPD--------------LKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC
T ss_pred CEEEECccHHHHHHHHHHHhcCCC--------------CeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc
Confidence 899999999999999999886 5 7899999752211 0
Q ss_pred -----------CCHHHHHHHHHHHHh-CCCEEEeC-ceEEEeC------C-----eEEEC--------------CCcEEe
Q 010845 282 -----------FDDRLRHYATTQLSK-SGVRLVRG-IVKDVDS------Q-----KLILN--------------DGTEVP 323 (499)
Q Consensus 282 -----------~~~~~~~~~~~~l~~-~gV~v~~~-~v~~v~~------~-----~v~~~--------------~g~~i~ 323 (499)
....+...+.+.+.+ .||+++.+ +|.++.. + +|.+. ++.++.
T Consensus 133 ~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~ 212 (326)
T 2gjc_A 133 YEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIE 212 (326)
T ss_dssp CEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEE
T ss_pred cccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEE
Confidence 012334455566666 49999988 7877631 1 23331 335799
Q ss_pred e---------------eEEEEcCCCCcc--hhccc-C---CCCCCCCCc----------eeeCCCCCCCCCCCeEEeccc
Q 010845 324 Y---------------GLLVWSTGVGPS--TLVKS-L---DLPKSPGGR----------IGIDEWLRVPSVQDVFAVGDC 372 (499)
Q Consensus 324 ~---------------D~vi~a~G~~p~--~~~~~-~---~l~~~~~G~----------i~vd~~l~~~~~~~Ifa~GD~ 372 (499)
+ |.||.|||.... .++.. + +..-.-.|- ..|+..-...-+|++|++|-.
T Consensus 213 A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~ 292 (326)
T 2gjc_A 213 LAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGME 292 (326)
T ss_dssp ESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHH
T ss_pred EeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChH
Confidence 9 999999998865 22221 1 110000010 112222221258999999997
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 010845 373 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 406 (499)
Q Consensus 373 a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~ 406 (499)
+.... |.+...++...-.-.|+.+|+.|...+
T Consensus 293 ~~~~~--~~~r~g~~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 293 VAELD--GLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHHH--TCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhc--CCCCCChhhhhhhhhhHHHHHHHHHHh
Confidence 75432 222233444445567999999887665
No 215
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.88 E-value=2.7e-05 Score=79.72 Aligned_cols=103 Identities=21% Similarity=0.300 Sum_probs=69.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. . ...+...+.+. + ...++.++.+ +|
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~-~~~~~~~l~~~---l-~~~Gv~v~~~~~v 244 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA----------V-DEQVAKEAQKI---L-TKQGLKILLGARV 244 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------S-CHHHHHHHHHH---H-HHTTEEEEETCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc----------c-CHHHHHHHHHH---H-HhCCCEEEECCEE
Confidence 478999999999999999999999999999998754210 0 11112222222 2 2357887764 88
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++.+.+.+.+...+.+ + ..++++|.||+|+|..|+..
T Consensus 245 ~~i~~~~~~~~v~~~~~~-----g-~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 245 TGTEVKNKQVTVKFVDAE-----G-EKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEEEECSSCEEEEEESSS-----E-EEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCEEEEEEEeCC-----C-cEEEECCEEEEeeCCcccCC
Confidence 888766554443321111 1 24789999999999988764
No 216
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.88 E-value=1.8e-05 Score=80.79 Aligned_cols=91 Identities=23% Similarity=0.301 Sum_probs=70.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------------------------------- 280 (499)
.|+|||||+.|+.+|..|++.+ .+|+++++..+-.
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~ 72 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALG--------------KKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGW 72 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 7999999999999999999877 8999999843110
Q ss_pred -----CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE-CCCcEEeeeEEEEcCCCCcc
Q 010845 281 -----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL-NDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 281 -----~~~------------~~~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~-~~g~~i~~D~vi~a~G~~p~ 336 (499)
.++ ..+...+.+.+++.||+++.+.+..++...+.+ .+++++.+|.+|+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 73 TVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp EECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcc
Confidence 000 022233445567789999999887787788888 57789999999999998775
No 217
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.88 E-value=2.1e-05 Score=80.85 Aligned_cols=106 Identities=19% Similarity=0.178 Sum_probs=70.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. . ..++...+.+. +. ..++.++. .+|
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~-d~~~~~~l~~~---l~-~~gV~v~~~~~v 262 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG----------M-DGEVAKQLQRM---LT-KQGIDFKLGAKV 262 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS----------S-CHHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc----------C-CHHHHHHHHHH---HH-hCCCEEEECCeE
Confidence 478999999999999999999999999999998764211 0 11111222222 22 25777765 478
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCCC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~~ 186 (499)
..++.+...+.+...+.. .++..++++|.||+|+|..|+...
T Consensus 263 ~~i~~~~~~~~v~~~~~~----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 263 TGAVKSGDGAKVTFEPVK----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEETTEEEEEEEETT----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEEEeCCEEEEEEEecC----CCceEEEEcCEEEEeeCCccCCCc
Confidence 888766655443321100 011357999999999999887643
No 218
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.88 E-value=7.1e-05 Score=78.35 Aligned_cols=91 Identities=19% Similarity=0.241 Sum_probs=69.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCC------------------------C-----
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------------------------S----- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~------------------------~----- 281 (499)
.|+|||||+.|+++|..+++.+ .+|+++++.. .+. .
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 7999999999999999999887 8899998751 110 0
Q ss_pred -------------------------CC-HHHHHHHHHHHHh-CCCEEEeCceEEEe--CC---eEEECCCcEEeeeEEEE
Q 010845 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (499)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~v~~v~--~~---~v~~~~g~~i~~D~vi~ 329 (499)
.+ ..+...+.+.+++ .||+++.++|.++. ++ +|.+.+|.++.+|.||+
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEE
Confidence 00 1345556667777 69999766888884 33 46778888999999999
Q ss_pred cCCCCcc
Q 010845 330 STGVGPS 336 (499)
Q Consensus 330 a~G~~p~ 336 (499)
|+|..+.
T Consensus 176 ATGt~s~ 182 (651)
T 3ces_A 176 TVGTFLD 182 (651)
T ss_dssp CCSTTTC
T ss_pred cCCCCcc
Confidence 9998764
No 219
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.87 E-value=2.6e-05 Score=79.64 Aligned_cols=91 Identities=20% Similarity=0.282 Sum_probs=68.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------------------------------ 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~------------------------------ 281 (499)
.|+|||||+.|+.+|..|++.+ .+|+++++...+..
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G--------------~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAK--------------YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 7999999999999999999877 89999996532210
Q ss_pred --CCH-H----------HH--HHHHHHHHhCCCEEEeCceEEEeCCe--EEECCCcE--EeeeEEEEcCCCCcc
Q 010845 282 --FDD-R----------LR--HYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTE--VPYGLLVWSTGVGPS 336 (499)
Q Consensus 282 --~~~-~----------~~--~~~~~~l~~~gV~v~~~~v~~v~~~~--v~~~~g~~--i~~D~vi~a~G~~p~ 336 (499)
++. . +. ..+.+.+++.||+++.+++..++.+. |..++|++ +.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc
Confidence 000 0 01 33444556789999988888888875 44567778 999999999998876
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.87 E-value=4.1e-05 Score=80.21 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=66.7
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCC--------------H-HHHHHHHHHHH
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------D-RLRHYATTQLS 295 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~--------------~-~~~~~~~~~l~ 295 (499)
++|+|||||+.|+.+|..|++.+ ++.+|+++++.+..+..+ . .+........+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~------------~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS------------ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhC------------cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHH
Confidence 38999999999999999998762 128999999874322110 0 01112233344
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEECC---Cc--EEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~--~v~~~~---g~--~i~~D~vi~a~G~~p~ 336 (499)
+.||+++.+ +|.+++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 118 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI 118 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC
Confidence 579999988 89999764 565543 54 7899999999999876
No 221
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.86 E-value=1.4e-05 Score=84.22 Aligned_cols=97 Identities=15% Similarity=0.288 Sum_probs=69.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. + ...+...+.+. +. ..++.++. .+|
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--~---------~~~~~~~l~~~---l~-~~GV~i~~~~~v 251 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP--I---------DYEMAAYVHEH---MK-NHDVELVFEDGV 251 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--S---------CHHHHHHHHHH---HH-HTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc--C---------CHHHHHHHHHH---HH-HcCCEEEECCeE
Confidence 478999999999999999999999999999988753211 0 01111222222 22 25777765 578
Q ss_pred EEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 141 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
..++.+.+.|.+.+ + .++++|.||+|+|..|+.
T Consensus 252 ~~i~~~~~~v~~~~---g--------~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 252 DALEENGAVVRLKS---G--------SVIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEEEGGGTEEEETT---S--------CEEECSEEEECSCEEECC
T ss_pred EEEecCCCEEEECC---C--------CEEEcCEEEEccCCCCCh
Confidence 88887666776643 2 379999999999988765
No 222
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.86 E-value=4e-05 Score=78.77 Aligned_cols=91 Identities=15% Similarity=0.273 Sum_probs=68.5
Q ss_pred cEEEeCcChHHHHHHHHHHH-HHHHHHHHhcCCCCCceEEEEEe---------CCCcCC---------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEILS--------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~-~~~~~~~~~~~~~~~~~~Vtlv~---------~~~~l~--------------------- 280 (499)
+|+|||||+.|+.+|..+++ .+ .+|++++ +..+-.
T Consensus 5 dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~ 70 (490)
T 1fec_A 5 DLVVIGAGSGGLEAGWNAASLHK--------------KRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMD 70 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHHcC--------------CEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHH
Confidence 79999999999999999998 76 8999999 332211
Q ss_pred -----------------CCC-HH-----------HHHHHHHHHHhC-CCEEEeCceEEEeCCeEEEC-----CC---cEE
Q 010845 281 -----------------SFD-DR-----------LRHYATTQLSKS-GVRLVRGIVKDVDSQKLILN-----DG---TEV 322 (499)
Q Consensus 281 -----------------~~~-~~-----------~~~~~~~~l~~~-gV~v~~~~v~~v~~~~v~~~-----~g---~~i 322 (499)
.++ +. +...+.+.+++. ||+++.+.+..++.+.+.+. +| +++
T Consensus 71 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~ 150 (490)
T 1fec_A 71 TIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETL 150 (490)
T ss_dssp HHHHGGGGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEE
T ss_pred HHHHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEE
Confidence 000 01 112233456677 99999998788888888874 66 689
Q ss_pred eeeEEEEcCCCCcc
Q 010845 323 PYGLLVWSTGVGPS 336 (499)
Q Consensus 323 ~~D~vi~a~G~~p~ 336 (499)
.+|.+|+|||.+|.
T Consensus 151 ~~d~lviAtGs~p~ 164 (490)
T 1fec_A 151 DTEYILLATGSWPQ 164 (490)
T ss_dssp EEEEEEECCCEEEC
T ss_pred EcCEEEEeCCCCCC
Confidence 99999999998876
No 223
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.84 E-value=7e-05 Score=76.50 Aligned_cols=92 Identities=25% Similarity=0.296 Sum_probs=67.4
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCC----------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF---------------------------- 282 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~---------------------------- 282 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++.+.+...
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 72 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLG--------------FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFAN 72 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999876 899999987322100
Q ss_pred ----------C-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--CCC--cEEeeeEEEEcCCCCcc
Q 010845 283 ----------D-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 283 ----------~-~~-----------~~~~~~~~l~~~gV~v~~~~v~~v~~~~v~~--~~g--~~i~~D~vi~a~G~~p~ 336 (499)
+ +. +...+.+.+++.||+++.+....++.+.+.+ .+| +++.+|.+|+|+|.+|.
T Consensus 73 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 73 HGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp HTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 0 00 1112344566789999999544577776655 356 68999999999999876
No 224
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.83 E-value=9.5e-06 Score=81.11 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=32.4
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
.||+|||||++||++|..|++.|++|+|||+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999987654
No 225
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.83 E-value=1e-05 Score=83.38 Aligned_cols=93 Identities=16% Similarity=0.329 Sum_probs=64.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc------CC-----CCCH-HHHHHHHHHH--Hh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS-----SFDD-RLRHYATTQL--SK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~------l~-----~~~~-~~~~~~~~~l--~~ 296 (499)
++|||||||+.|+.+|..|.... .+||||++.+. |+ .+++ ++...+.+.+ ++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~--------------~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~ 108 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKK--------------YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKK 108 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTT--------------CEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCS
T ss_pred CCEEEECCcHHHHHHHHHhhhCC--------------CcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhc
Confidence 48999999999999998876433 89999998631 11 1111 1111122322 34
Q ss_pred CCCEEEeCceEEEeCC--eEEE--------------------CCCcEEeeeEEEEcCCCCcch
Q 010845 297 SGVRLVRGIVKDVDSQ--KLIL--------------------NDGTEVPYGLLVWSTGVGPST 337 (499)
Q Consensus 297 ~gV~v~~~~v~~v~~~--~v~~--------------------~~g~~i~~D~vi~a~G~~p~~ 337 (499)
.+++++.+++++|+.+ .|++ .++.++++|.+|+|+|..|+.
T Consensus 109 ~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~ 171 (502)
T 4g6h_A 109 GNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT 171 (502)
T ss_dssp SCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC
T ss_pred CCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc
Confidence 5799998888888754 4544 246789999999999999873
No 226
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.83 E-value=5.9e-05 Score=77.03 Aligned_cols=92 Identities=26% Similarity=0.321 Sum_probs=67.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc---------------------------CCCC-
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---------------------------LSSF- 282 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~---------------------------l~~~- 282 (499)
.+|+|||||+.|+.+|..|++.+ .+|++++++++ .|.+
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~ 70 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQG--------------AQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDG 70 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcC
Confidence 38999999999999999998876 89999997631 1111
Q ss_pred ---------C-HHHHH-------H-----HHHHHHhC-CCEEEeCceEEEeCCeEE--ECCC--cEEeeeEEEEcCCCCc
Q 010845 283 ---------D-DRLRH-------Y-----ATTQLSKS-GVRLVRGIVKDVDSQKLI--LNDG--TEVPYGLLVWSTGVGP 335 (499)
Q Consensus 283 ---------~-~~~~~-------~-----~~~~l~~~-gV~v~~~~v~~v~~~~v~--~~~g--~~i~~D~vi~a~G~~p 335 (499)
+ ..+.. . ..+.+++. ||+++.+++..++.+.+. +.+| +++.+|.+|+|||.+|
T Consensus 71 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 71 GIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASP 150 (467)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEE
T ss_pred CccCCCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCC
Confidence 1 11111 1 12445666 999998887778877554 4577 6899999999999887
Q ss_pred c
Q 010845 336 S 336 (499)
Q Consensus 336 ~ 336 (499)
.
T Consensus 151 ~ 151 (467)
T 1zk7_A 151 A 151 (467)
T ss_dssp C
T ss_pred C
Confidence 5
No 227
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.82 E-value=1.6e-05 Score=81.51 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+...-. + + ..+...+.+. +. ..+++++.+ +|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--~--------d-~~~~~~l~~~---l~-~~Gv~i~~~~~v 249 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK--F--------D-ECIQNTITDH---YV-KEGINVHKLSKI 249 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--S--------C-HHHHHHHHHH---HH-HHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc--c--------C-HHHHHHHHHH---HH-hCCeEEEeCCEE
Confidence 478999999999999999999999999999998763210 0 0 1111122222 22 246777654 78
Q ss_pred EEEECCCCE--EEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 141 AGIDTDNHV--VHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 141 ~~id~~~~~--v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
+.++.+... +.+... ++ + .++++|.||+|+|..|+.
T Consensus 250 ~~i~~~~~~~~~~v~~~-~G------~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 250 VKVEKNVETDKLKIHMN-DS------K-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEEEECC-CCCEEEEET-TS------C-EEEEESEEEECSCEEECC
T ss_pred EEEEEcCCCcEEEEEEC-CC------c-EEEEcCEEEECCCCCCcc
Confidence 888754321 333221 11 1 379999999999998876
No 228
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.82 E-value=3.5e-05 Score=79.33 Aligned_cols=92 Identities=15% Similarity=0.266 Sum_probs=68.3
Q ss_pred ccEEEeCcChHHHHHHHHHHH-HHHHHHHHhcCCCCCceEEEEEe---------CCCcC---------C-----------
Q 010845 231 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEIL---------S----------- 280 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~-~~~~~~~~~~~~~~~~~~Vtlv~---------~~~~l---------~----------- 280 (499)
.+|+|||||+.|+.+|..+++ .+ .+|++++ +..+- |
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~ 73 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYG--------------KRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYM 73 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHH
T ss_pred cCEEEECCChhHHHHHHHHHHhcC--------------CeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHH
Confidence 379999999999999999998 76 8999999 33220 0
Q ss_pred ------------------CCC-HHH-----------HHHHHHHHHhC-CCEEEeCceEEEeCCeEEEC---C-----CcE
Q 010845 281 ------------------SFD-DRL-----------RHYATTQLSKS-GVRLVRGIVKDVDSQKLILN---D-----GTE 321 (499)
Q Consensus 281 ------------------~~~-~~~-----------~~~~~~~l~~~-gV~v~~~~v~~v~~~~v~~~---~-----g~~ 321 (499)
.++ ..+ ...+.+.+++. ||+++.+.+..++...|.++ + +++
T Consensus 74 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~ 153 (495)
T 2wpf_A 74 DHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKER 153 (495)
T ss_dssp HHHHHHHTTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEE
T ss_pred HHHhHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeE
Confidence 000 011 11223345677 99999998777888888886 4 678
Q ss_pred EeeeEEEEcCCCCcc
Q 010845 322 VPYGLLVWSTGVGPS 336 (499)
Q Consensus 322 i~~D~vi~a~G~~p~ 336 (499)
+.+|.+|+|||.+|.
T Consensus 154 ~~~d~lViATGs~p~ 168 (495)
T 2wpf_A 154 LQADHILLATGSWPQ 168 (495)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEEeCCCCcC
Confidence 999999999999876
No 229
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.81 E-value=1.2e-05 Score=80.90 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=35.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~~~~~ 99 (499)
.+++|+|||||++||+||..|++.| ++|+|+|+++....
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 4579999999999999999999999 89999999887643
No 230
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.81 E-value=6.5e-05 Score=72.60 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=99.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHH--HHHHHHHhcCCCCCceEEEEEeCCCcCC-C--------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEILS-S-------------------------- 281 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~--~~~~~~~~~~~~~~~~~Vtlv~~~~~l~-~-------------------------- 281 (499)
..|+|||||+.|+.+|..|++. + .+|+++++..... .
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G--------------~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv 145 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPD--------------LRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV 145 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCC--------------CEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC
Confidence 3799999999999999999886 5 7899998763111 0
Q ss_pred -C-----------CHHHHHHHHHHHHh-CCCEEEeC-ceEEEe--C-----------------C-----eEEEC------
Q 010845 282 -F-----------DDRLRHYATTQLSK-SGVRLVRG-IVKDVD--S-----------------Q-----KLILN------ 317 (499)
Q Consensus 282 -~-----------~~~~~~~~~~~l~~-~gV~v~~~-~v~~v~--~-----------------~-----~v~~~------ 317 (499)
+ ..++.+.+.+.+.+ .||+++.+ .+.++. + + +|.+.
T Consensus 146 ~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~ 225 (344)
T 3jsk_A 146 PYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSM 225 (344)
T ss_dssp CCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHT
T ss_pred cccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeec
Confidence 0 12334555566666 59999988 676652 1 1 23321
Q ss_pred --------CCcEEeeeEEEEcCCCCcc--h-hc---ccCCCCCCCCCc----------eeeCCCCCCCCCCCeEEecccc
Q 010845 318 --------DGTEVPYGLLVWSTGVGPS--T-LV---KSLDLPKSPGGR----------IGIDEWLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 318 --------~g~~i~~D~vi~a~G~~p~--~-~~---~~~~l~~~~~G~----------i~vd~~l~~~~~~~Ifa~GD~a 373 (499)
+..++.++.||.|||.... . +. ..+++...-.|. ..|+.+-++ +|++|++|=.+
T Consensus 226 ~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~ 303 (344)
T 3jsk_A 226 HHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMEL 303 (344)
T ss_dssp TSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGH
T ss_pred cCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhh
Confidence 2247999999999998765 1 22 233432111111 112222222 79999999876
Q ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 374 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 374 ~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.-.. |.+...++...=...|+.+|+.|...++
T Consensus 304 ~~~~--g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 304 SEID--GANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp HHHH--TCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred Hhhc--CCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 5322 3333344444455679999998887775
No 231
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.80 E-value=5.5e-05 Score=75.93 Aligned_cols=90 Identities=18% Similarity=0.316 Sum_probs=67.7
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-----CC------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-----SF------------------------ 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~-----~~------------------------ 282 (499)
+|+|||||++|+-+|..|++.+ .+|+++++.+... .+
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 7999999999999999998866 7788887642100 00
Q ss_pred --------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce----EEECCCc--E
Q 010845 283 --------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK----LILNDGT--E 321 (499)
Q Consensus 283 --------------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~----v~~~~g~--~ 321 (499)
...+.+.+.+.+++.|++++.+ +|++++. ++ +.+.+|+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKRE 152 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEE
Confidence 1244556667777789999999 8888753 32 4446787 7
Q ss_pred EeeeEEEEcCCCCc
Q 010845 322 VPYGLLVWSTGVGP 335 (499)
Q Consensus 322 i~~D~vi~a~G~~p 335 (499)
+.+|.||.|+|..+
T Consensus 153 ~~a~~vV~A~G~~s 166 (421)
T 3nix_A 153 IEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEECCGGGC
T ss_pred EEcCEEEECCCCch
Confidence 99999999999876
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.80 E-value=8.7e-05 Score=76.03 Aligned_cols=94 Identities=23% Similarity=0.347 Sum_probs=67.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCC--------------CHHHHHHHHHHH-H
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQL-S 295 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~--------------~~~~~~~~~~~l-~ 295 (499)
.+|+|||||+.|+.+|..|++.. .+.+|+++++....+.. ..++.....+.+ +
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~------------~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 104 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND------------ENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRD 104 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhC------------cCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHh
Confidence 48999999999999999998751 12899999987432211 111111223445 3
Q ss_pred hCCCEEEeC-ceEEEeC--CeEEEC---CCc--EEeeeEEEEcCCCCcc
Q 010845 296 KSGVRLVRG-IVKDVDS--QKLILN---DGT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~--~~v~~~---~g~--~i~~D~vi~a~G~~p~ 336 (499)
..||+++.+ +|..++. +.+.+. +|+ ++.+|.+|+|+|.+|.
T Consensus 105 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp TTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 459999998 8888874 466664 366 7999999999998875
No 233
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.80 E-value=0.00013 Score=76.14 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=68.8
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCC----------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSF---------------------------- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~---------------------------- 282 (499)
.|+|||||+.|+++|..+++.+ .+|.++++.. .+...
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 7999999999999999999877 8899998751 11100
Q ss_pred ---------------------------CHHHHHHHHHHHHh-CCCEEEeCceEEEe--CC---eEEECCCcEEeeeEEEE
Q 010845 283 ---------------------------DDRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (499)
Q Consensus 283 ---------------------------~~~~~~~~~~~l~~-~gV~v~~~~v~~v~--~~---~v~~~~g~~i~~D~vi~ 329 (499)
...+.+.+.+.+++ .||+++...|.++. ++ +|.+.+|+++.+|.||+
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 01234555667777 59999766888874 33 47788899999999999
Q ss_pred cCCCCcc
Q 010845 330 STGVGPS 336 (499)
Q Consensus 330 a~G~~p~ 336 (499)
|+|..++
T Consensus 175 ATG~~s~ 181 (637)
T 2zxi_A 175 TTGTFLN 181 (637)
T ss_dssp CCTTCBT
T ss_pred ccCCCcc
Confidence 9998754
No 234
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.80 E-value=0.00012 Score=72.75 Aligned_cols=91 Identities=14% Similarity=0.233 Sum_probs=69.2
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCc---CC----------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LS---------------------------- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~---l~---------------------------- 280 (499)
+|+|||||++|+.+|..|++.+ .+|+++++... ..
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 7999999999999999999876 77888876421 00
Q ss_pred ------------------------C-----CC-HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEE-CCCc--E
Q 010845 281 ------------------------S-----FD-DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLIL-NDGT--E 321 (499)
Q Consensus 281 ------------------------~-----~~-~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~-~~g~--~ 321 (499)
. ++ ..+.+.+.+.+.+.|++++.+ +|++++.+ .|++ .+|+ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01 234555666677789999999 89988642 4666 6787 7
Q ss_pred EeeeEEEEcCCCCcc
Q 010845 322 VPYGLLVWSTGVGPS 336 (499)
Q Consensus 322 i~~D~vi~a~G~~p~ 336 (499)
+.+|+||.|.|..+.
T Consensus 150 ~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 150 LDCDYIAGCDGFHGI 164 (394)
T ss_dssp EECSEEEECCCTTCS
T ss_pred EEeCEEEECCCCCcH
Confidence 999999999999875
No 235
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.80 E-value=6.4e-05 Score=77.91 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=69.7
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC------------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL------------------------------ 279 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l------------------------------ 279 (499)
.+|+|||||+.|+.+|..|++.+ .+|+++++.. +.
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 109 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMG--------------GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQ 109 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhc
Confidence 48999999999999999999876 8999999875 21
Q ss_pred ---CCC------CHHHHHHH----H---HHH-----HhCCCEEE-eCceEEEeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 280 ---SSF------DDRLRHYA----T---TQL-----SKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 280 ---~~~------~~~~~~~~----~---~~l-----~~~gV~v~-~~~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+.+ ..++.+.+ . +.+ ++.||+++ .+++..++...+.+. ++++.+|.+|+|||.+|.
T Consensus 110 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 110 YWFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPG 187 (523)
T ss_dssp TTCCCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECC
T ss_pred CcHHHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCC
Confidence 110 11122222 2 455 77899999 558888888888886 778999999999998876
No 236
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.78 E-value=7.1e-05 Score=74.63 Aligned_cols=92 Identities=21% Similarity=0.228 Sum_probs=65.9
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCC------CCHHHHH---------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS------FDDRLRH--------------- 288 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~------~~~~~~~--------------- 288 (499)
.+|+|||||++|+.+|..|++.+ .+|+++++.. .... +.+...+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 38999999999999999999877 8999998763 2111 1222111
Q ss_pred ----------------------------HHHHHHHh--CCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCC
Q 010845 289 ----------------------------YATTQLSK--SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 289 ----------------------------~~~~~l~~--~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+.+.|.+ .|++++.+ +|.+++.+ .|++.+|+++.+|+||.|.|.
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGG 151 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCT
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCc
Confidence 12222222 37888888 78888543 466788989999999999999
Q ss_pred Ccc
Q 010845 334 GPS 336 (499)
Q Consensus 334 ~p~ 336 (499)
.+.
T Consensus 152 ~S~ 154 (397)
T 2vou_A 152 ASV 154 (397)
T ss_dssp TCH
T ss_pred chh
Confidence 875
No 237
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.77 E-value=8.5e-05 Score=76.52 Aligned_cols=91 Identities=29% Similarity=0.444 Sum_probs=67.5
Q ss_pred cEEEeCcChHHHHHHHHHHHH---HHHHHHHhcCCCCCceEEEEEeCCCcC---------------------------C-
Q 010845 232 HCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIEANEIL---------------------------S- 280 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~---~~~~~~~~~~~~~~~~~Vtlv~~~~~l---------------------------~- 280 (499)
+|+|||||+.|+.+|..|++. + .+|+++++..+- .
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G--------------~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~ 69 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPET--------------TQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPH 69 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTT--------------EEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCc--------------CEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999987 5 899999987410 0
Q ss_pred -CC---------C-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeC------CeE--EECCCc--EEeeeEEE
Q 010845 281 -SF---------D-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDS------QKL--ILNDGT--EVPYGLLV 328 (499)
Q Consensus 281 -~~---------~-~~-----------~~~~~~~~l~~~gV~v~~~~v~~v~~------~~v--~~~~g~--~i~~D~vi 328 (499)
.+ + .. +...+.+.+++.||+++.+.+..++. +.+ .+++|+ ++.+|.+|
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lv 149 (499)
T 1xdi_A 70 LGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVL 149 (499)
T ss_dssp TTBC------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEE
T ss_pred CCCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEE
Confidence 00 1 01 22234566778899999987766766 443 345676 79999999
Q ss_pred EcCCCCcc
Q 010845 329 WSTGVGPS 336 (499)
Q Consensus 329 ~a~G~~p~ 336 (499)
+|||.+|.
T Consensus 150 iATGs~p~ 157 (499)
T 1xdi_A 150 VATGASPR 157 (499)
T ss_dssp ECCCEEEC
T ss_pred EcCCCCCC
Confidence 99998876
No 238
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.77 E-value=1.4e-05 Score=80.44 Aligned_cols=54 Identities=11% Similarity=0.187 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
...+.+.+.+.+++.|++++++ +|++++. ++++..+|+++.+|.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHH
Confidence 3678888899999999999999 8999975 3555567889999999999997643
No 239
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.76 E-value=9.2e-06 Score=83.97 Aligned_cols=49 Identities=27% Similarity=0.350 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--CeEEECCCcEEeeeEEEEcCCC
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.+.+.+.+.+++.|++++++ +|++|.. ..+++.||+++.||.||.++..
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 56667777788889999999 8999975 4788999999999999998764
No 240
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.76 E-value=0.00013 Score=76.40 Aligned_cols=91 Identities=19% Similarity=0.291 Sum_probs=68.8
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCCCC----------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSF---------------------------- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~~~---------------------------- 282 (499)
.|+|||||..|+++|..+++.+ .+|+++++.. .+...
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 7999999999999999999887 8899998752 11100
Q ss_pred --------------------------C-HHHHHHHHHHHHhC-CCEEEeCceEEEe--CC---eEEECCCcEEeeeEEEE
Q 010845 283 --------------------------D-DRLRHYATTQLSKS-GVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (499)
Q Consensus 283 --------------------------~-~~~~~~~~~~l~~~-gV~v~~~~v~~v~--~~---~v~~~~g~~i~~D~vi~ 329 (499)
+ ..+...+.+.+++. ||+++.+.|.++. ++ +|.+.+|+++.+|.||+
T Consensus 89 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVL 168 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAIL 168 (641)
T ss_dssp HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEE
T ss_pred HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 0 13455566677774 9999877787764 44 36778889999999999
Q ss_pred cCCCCcc
Q 010845 330 STGVGPS 336 (499)
Q Consensus 330 a~G~~p~ 336 (499)
|+|..++
T Consensus 169 ATG~~s~ 175 (641)
T 3cp8_A 169 ACGTFLN 175 (641)
T ss_dssp CCTTCBT
T ss_pred CcCCCCC
Confidence 9998754
No 241
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.76 E-value=1.5e-05 Score=80.28 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~---v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+.+.+.+++.|++++++ +|++|.. +. |.+ +|+++.+|.||+|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 568888889999999999999 8998853 33 444 5788999999999987654
No 242
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.76 E-value=1.8e-05 Score=81.04 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce-EEE-CCCcEEeeeEEEEcCCCC
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK-LIL-NDGTEVPYGLLVWSTGVG 334 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~-v~~-~~g~~i~~D~vi~a~G~~ 334 (499)
..+.+.+.+.+++.|++++++ +|++|+. ++ +.+ .++.++.+|.||+|++..
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPAS 289 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHH
Confidence 367788888899999999999 8988864 23 332 356689999999999753
No 243
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.75 E-value=0.00017 Score=69.78 Aligned_cols=89 Identities=13% Similarity=0.191 Sum_probs=63.0
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC---------------------CCCCHHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------------------SSFDDRLRHYA 290 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l---------------------~~~~~~~~~~~ 290 (499)
+|+|||||++|+.+|..|++.+ .+|+++++.+.. ....+.+.+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 7999999999999999999877 899999976311 01123332222
Q ss_pred HH-------------------------------------------HHHhCCCEEEeC-ceEEEeCC----eEEECCCcEE
Q 010845 291 TT-------------------------------------------QLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEV 322 (499)
Q Consensus 291 ~~-------------------------------------------~l~~~gV~v~~~-~v~~v~~~----~v~~~~g~~i 322 (499)
.+ .+. .|++++.+ +|++++.+ .|++.+|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 22 222 27899988 88888643 3566788766
Q ss_pred e-eeEEEEcCCCCc
Q 010845 323 P-YGLLVWSTGVGP 335 (499)
Q Consensus 323 ~-~D~vi~a~G~~p 335 (499)
. +|.||.|+|...
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 4 999999998654
No 244
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.74 E-value=1.3e-05 Score=79.31 Aligned_cols=60 Identities=10% Similarity=0.095 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
+..+...+.+.+++.|++++.+ +|++++. + .|.+.+| ++.+|.||+|+|.....+...++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 3577788888899999999988 8888753 3 3555555 89999999999988765554444
No 245
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.74 E-value=0.00016 Score=71.24 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCcEEeeeEEEEcCCCCcchhccc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKS 341 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~~ 341 (499)
.+.+.+.+.+++.|++++.+ +|++++. + .|.+.+| ++.+|.||+|+|.....++..
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~ 210 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLPE 210 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTSTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhccc
Confidence 34455566677889999998 8988864 2 3555566 599999999999877655543
No 246
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.74 E-value=2.3e-05 Score=77.16 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=35.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCC-CCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~-~~~~~ 99 (499)
..++|+|||||++||++|..|++.|++|+|+|++ +....
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4579999999999999999999999999999998 66543
No 247
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.72 E-value=1.9e-05 Score=80.36 Aligned_cols=53 Identities=9% Similarity=-0.043 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEe----CC---eEEECCCcEEeeeEEEEcCCCCcch
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVD----SQ---KLILNDGTEVPYGLLVWSTGVGPST 337 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~----~~---~v~~~~g~~i~~D~vi~a~G~~p~~ 337 (499)
..+.+.+.+.+++.|++++++ +|+++. ++ +|.+ +|+++.||.||+++|..+..
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~ 302 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEK 302 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccchh
Confidence 467888888899999999998 788774 33 3444 68889999999999988753
No 248
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.71 E-value=1.5e-05 Score=80.52 Aligned_cols=33 Identities=27% Similarity=0.319 Sum_probs=31.7
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999976
No 249
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.70 E-value=5.6e-05 Score=77.43 Aligned_cols=105 Identities=12% Similarity=0.092 Sum_probs=67.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .. ...+...+.+. +. ..+++++. .++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~---------d~~~~~~~~~~---l~-~~gv~i~~~~~v 251 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR--SF---------DSMISTNCTEE---LE-NAGVEVLKFSQV 251 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--TS---------CHHHHHHHHHH---HH-HTTCEEETTEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc--cc---------CHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 47899999999999999999999999999999775321 00 01111222222 22 25777765 478
Q ss_pred EEEECCC-C-EEEEeeecCccccCCCc--eeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDN-H-VVHCETVTDELRTLEPW--KFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~-~-~v~~~~~~~~~~~~~~~--~~~i~yd~LViAtG~~~~~~ 185 (499)
+.++... . .+.+...+.+ .++ +.++++|.||+|+|..|+..
T Consensus 252 ~~i~~~~~~~~~~v~~~~~~----~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 252 KEVKKTLSGLEVSMVTAVPG----RLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEECSSSEEEEEEECCTT----SCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEEEcCCCcEEEEEEccCC----CCcccceEEEcCEEEEeeccccCCC
Confidence 8887543 2 2333321111 011 15789999999999988764
No 250
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.69 E-value=1.4e-05 Score=82.86 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=35.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCCCcccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVFT 100 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~~~~~~ 100 (499)
.++|+|||||+|||+||..|++.| ++|+|+|+++..+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 468999999999999999999999 999999999876543
No 251
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.69 E-value=0.00023 Score=74.61 Aligned_cols=92 Identities=21% Similarity=0.322 Sum_probs=70.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC------------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 280 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~------------------------------ 280 (499)
.+|+|||||++|+-+|..|++.+ .+|+++++.....
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~ 89 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYV 89 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCE
T ss_pred CCEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCc
Confidence 38999999999999999999876 6777777642100
Q ss_pred ----------------------------------CC-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEEC-C
Q 010845 281 ----------------------------------SF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN-D 318 (499)
Q Consensus 281 ----------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~-----~v~~~-~ 318 (499)
.+ ...+...+.+.+++.||+++.+ +|++++.+ .|.+. +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~ 169 (591)
T 3i3l_A 90 KKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRG 169 (591)
T ss_dssp EECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEET
T ss_pred ccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecC
Confidence 00 1245566777788899999999 89998742 46666 6
Q ss_pred C--cEEeeeEEEEcCCCCcc
Q 010845 319 G--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 319 g--~~i~~D~vi~a~G~~p~ 336 (499)
| .++.+|.||.|+|..+.
T Consensus 170 G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 170 GESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp TEEEEEEESEEEECCGGGCH
T ss_pred CceEEEEcCEEEECCCCcch
Confidence 6 57999999999998763
No 252
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.68 E-value=2e-05 Score=88.13 Aligned_cols=91 Identities=18% Similarity=0.342 Sum_probs=69.8
Q ss_pred ccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce-EEEEEeCCCcC--------CC--CCHHHHHHHHHHHHhC
Q 010845 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEIL--------SS--FDDRLRHYATTQLSKS 297 (499)
Q Consensus 229 ~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~-~Vtlv~~~~~l--------~~--~~~~~~~~~~~~l~~~ 297 (499)
..++|+|||||+.|+.+|..|++.+ . +|+++++.+.+ |. ++.++.++..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 4568999999999999999999876 6 69999986322 22 3456666777888999
Q ss_pred CCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCC-Ccc
Q 010845 298 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPS 336 (499)
Q Consensus 298 gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~-~p~ 336 (499)
||+++.+ .+. ...+.+++++++.+|.||+|||. .|.
T Consensus 252 gv~~~~~~~v~---~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 252 GVKIICGKSLS---ENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp TCEEEESCCBS---TTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred CcEEEcccEec---cceEEhhhcCccCCCEEEEecCCCCCC
Confidence 9999998 442 13455555566789999999998 465
No 253
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.68 E-value=2.1e-05 Score=79.52 Aligned_cols=58 Identities=16% Similarity=0.177 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC----ceEEEe--CC---eEEECCCcEEeeeEEEEcCCCCcchhcc
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG----IVKDVD--SQ---KLILNDGTEVPYGLLVWSTGVGPSTLVK 340 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~----~v~~v~--~~---~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 340 (499)
+..+...+.+.+++.|++++.+ +|+++. ++ +|++.+|+++.+|.||+|+|.....++.
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC
Confidence 3567788888899999999987 588875 33 3777888899999999999988765543
No 254
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.68 E-value=2.1e-05 Score=81.62 Aligned_cols=39 Identities=31% Similarity=0.338 Sum_probs=35.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT 100 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 100 (499)
+++|+|||||+|||+||..|++.|++|+|+|+++.....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 468999999999999999999999999999999876443
No 255
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.68 E-value=1.6e-05 Score=78.72 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.6
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.+++|+|||||++|+++|+.|++.|++|+|||+..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 34799999999999999999999999999999975
No 256
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.67 E-value=5.8e-05 Score=77.42 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=66.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++...+. . . ..++...+.+. +. ..++.++. .++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~---~--------~-d~~~~~~l~~~---l~-~~Gv~i~~~~~v 250 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR---G--------F-DQQMAELVAAS---ME-ERGIPFLRKTVP 250 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST---T--------S-CHHHHHHHHHH---HH-HTTCCEEETEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc---c--------c-CHHHHHHHHHH---HH-hCCCEEEeCCEE
Confidence 4689999999999999999999999999998853211 0 0 01111222222 22 25677665 478
Q ss_pred EEEECCC-C--EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTDN-H--VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~~-~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
..++... . .+++.+... ++..++++|.||+|+|..|+..
T Consensus 251 ~~i~~~~~~~~~v~~~~~~~------~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 251 LSVEKQDDGKLLVKYKNVET------GEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEECTTSCEEEEEEETTT------CCEEEEEESEEEECSCEEECCG
T ss_pred EEEEEcCCCcEEEEEecCCC------CceeEEEcCEEEECcccccCcC
Confidence 8887533 2 344444211 1235799999999999988753
No 257
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.66 E-value=2.3e-05 Score=78.35 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=35.2
Q ss_pred CCcEEEECCchHHHHHHHhccCC-CCeEEEEcCCCCcccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFT 100 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~-g~~V~lie~~~~~~~~ 100 (499)
+++|+|||||++||++|..|++. |++|+|+|++++....
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 57999999999999999999998 9999999999876544
No 258
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.65 E-value=7.8e-05 Score=76.57 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=65.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-EEE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+++++...+. .+ ..++...+.+. +. ..++.++. ..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~---~~---------d~~~~~~l~~~---l~-~~gv~~~~~~~v 248 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR---GF---------DQQMSSLVTEH---ME-SHGTQFLKGCVP 248 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST---TS---------CHHHHHHHHHH---HH-HTTCEEEETEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc---cC---------CHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 4689999999999999999999999999999864211 00 01111222222 22 25777765 477
Q ss_pred EEEEC-CCC--EEEEeeecCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDT-DNH--VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~-~~~--~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
..+.. +.. .+.+.+..++ +..++++|.||+|+|..|+..
T Consensus 249 ~~i~~~~~~~~~v~~~~~~~g------~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 249 SHIKKLPTNQLQVTWEDHASG------KEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEECTTSCEEEEEEETTTT------EEEEEEESEEEECSCEEESCG
T ss_pred EEEEEcCCCcEEEEEEeCCCC------eeEEEECCEEEEcccCCcccC
Confidence 77764 223 3444332112 123589999999999988754
No 259
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.64 E-value=3.1e-05 Score=79.27 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=34.3
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
..++|+|||||++||++|..|++.|++|+|+|+++....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 357999999999999999999999999999999987543
No 260
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.64 E-value=3.4e-05 Score=79.27 Aligned_cols=39 Identities=28% Similarity=0.246 Sum_probs=35.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
..++|+|||||++||+||+.|++.|++|+|+|+++....
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 357999999999999999999999999999999987544
No 261
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.63 E-value=3.5e-05 Score=78.45 Aligned_cols=88 Identities=18% Similarity=0.217 Sum_probs=66.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC--------CCC--CHHHHHHHHHHHHhCCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------SSF--DDRLRHYATTQLSKSGV 299 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l--------~~~--~~~~~~~~~~~l~~~gV 299 (499)
++|+|||+|+.|+.+|..|.+.+ ++.+|+++++.+ +. |.+ ..++...+.+.+++.||
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv 74 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRC 74 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTE
T ss_pred ceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCc
Confidence 58999999999999999998754 237999999863 32 322 23566777788889999
Q ss_pred EEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCc
Q 010845 300 RLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 300 ~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
+++.+ .+ ...|.+++ .++.+|.||+|||..|
T Consensus 75 ~~~~~~~v----~~~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 75 AFYGNVEV----GRDVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp EEEBSCCB----TTTBCHHH-HHHHSSEEEECCCCCE
T ss_pred EEEeeeEE----eeEEEecc-ceEEcCEEEEecCcCC
Confidence 99988 55 23344444 3468999999999986
No 262
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.62 E-value=3.3e-05 Score=79.51 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhCC-CEEEeC-ceEEEeC--C--eEEECCCcEEeeeEEEEcCCCC
Q 010845 284 DRLRHYATTQLSKSG-VRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVG 334 (499)
Q Consensus 284 ~~~~~~~~~~l~~~g-V~v~~~-~v~~v~~--~--~v~~~~g~~i~~D~vi~a~G~~ 334 (499)
..+.+.+.+.+++.| ++++.+ +|++|+. + .|++.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 467778888888888 999999 8999863 3 3556788889999999999964
No 263
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.62 E-value=1.5e-05 Score=81.29 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=33.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCC------CeEEEEcCCCCcc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRNHMV 98 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g------~~V~lie~~~~~~ 98 (499)
+++|+|||||++||+||++|++.| ++|+|+|+++...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 479999999999999999999998 9999999987654
No 264
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.62 E-value=0.00019 Score=71.75 Aligned_cols=91 Identities=18% Similarity=0.252 Sum_probs=65.9
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC------C---------------------
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------F--------------------- 282 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~------~--------------------- 282 (499)
..+|+|||||++|+-+|..|++.+ .+|+++++...... +
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~ 88 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFG 88 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhc
Confidence 348999999999999999999876 77888876521100 0
Q ss_pred -------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCc
Q 010845 283 -------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT 320 (499)
Q Consensus 283 -------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~ 320 (499)
...+.+.+.+.+.+ ++++.+ +|++++. + .|++.+|+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~ 166 (407)
T 3rp8_A 89 GPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGS 166 (407)
T ss_dssp CCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSC
T ss_pred CCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCC
Confidence 01233444444444 788888 7888754 3 46678899
Q ss_pred EEeeeEEEEcCCCCcc
Q 010845 321 EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 321 ~i~~D~vi~a~G~~p~ 336 (499)
++.+|+||.|.|....
T Consensus 167 ~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 167 SASGDLLIAADGSHSA 182 (407)
T ss_dssp EEEESEEEECCCTTCS
T ss_pred EEeeCEEEECCCcChH
Confidence 9999999999999875
No 265
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.62 E-value=2.7e-05 Score=79.20 Aligned_cols=92 Identities=12% Similarity=0.150 Sum_probs=66.5
Q ss_pred ccEEEeCcChHHHHHHHHHHH-HHHHHHHHhcCCCCCceEEEEEeCC-CcC--------CC--CCHHHHHHHHHHHHhCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SS--FDDRLRHYATTQLSKSG 298 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~-~~~~~~~~~~~~~~~~~~Vtlv~~~-~~l--------~~--~~~~~~~~~~~~l~~~g 298 (499)
++|+|||||+.|+.+|..|.+ ... ....+.+|+++++. .+. |. ...++...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 520 00002899999986 332 21 12356777778888899
Q ss_pred CEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCCCCc
Q 010845 299 VRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 299 V~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
|+++.+ .+ +..|.++++ ++.+|.||+|||..+
T Consensus 76 v~~~~~v~v----~~~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp EEEEESCCB----TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred CEEEeeEEE----CCEEEECCC-eEeCCEEEEeeCCCC
Confidence 999988 43 334555555 478999999999973
No 266
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.60 E-value=0.00021 Score=74.95 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe--C-C---eEEEC--CCc--EEeeeEEEEcCCCCc
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGP 335 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~~v~--~-~---~v~~~--~g~--~i~~D~vi~a~G~~p 335 (499)
+.+.+.+.+++.||+++.+ +|.++. + + +|++. +|+ ++.+|.||+|+|...
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4455666677889999999 888875 2 2 25554 565 689999999999865
No 267
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.60 E-value=3e-05 Score=77.79 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCe-EEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~-V~lie~~~~~ 97 (499)
..+|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 47999999999999999999999999 9999998653
No 268
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.60 E-value=3.6e-05 Score=75.70 Aligned_cols=34 Identities=32% Similarity=0.321 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.+|+|||||++|+++|++|++.|++|+|||++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4799999999999999999999999999999875
No 269
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.59 E-value=0.00018 Score=71.39 Aligned_cols=90 Identities=19% Similarity=0.285 Sum_probs=65.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC---------------------C---------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------------------S--------- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~---------------------~--------- 281 (499)
.|+|||||++|+-+|..|++.+ .+|+++++..... .
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G--------------~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 7999999999999999999866 5666666542100 0
Q ss_pred --------------C--------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEE---CCCcEEee
Q 010845 282 --------------F--------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LIL---NDGTEVPY 324 (499)
Q Consensus 282 --------------~--------------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~---v~~---~~g~~i~~ 324 (499)
+ ...+.+.+.+.+++.|++++.+ +|++++. +. |.+ .++.++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 0 0134566677777889999998 8888753 32 555 34568999
Q ss_pred eEEEEcCCCCc
Q 010845 325 GLLVWSTGVGP 335 (499)
Q Consensus 325 D~vi~a~G~~p 335 (499)
|.||.|+|..+
T Consensus 152 ~~vV~A~G~~s 162 (397)
T 3cgv_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCcch
Confidence 99999999887
No 270
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.58 E-value=2.4e-05 Score=77.99 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--CeE--EECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~v--~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
..+...+.+.+++.|++++.+ +|.+++. +++ .+.+ .++.+|.||+|+|.....+...++
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~-g~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDR-GTYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESS-CEEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECC-CEEEcCEEEEcCCcChHHHhhhcC
Confidence 456677788888899999998 8888753 344 3344 479999999999988665555444
No 271
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.56 E-value=0.00027 Score=73.56 Aligned_cols=92 Identities=20% Similarity=0.228 Sum_probs=67.8
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-c--------CC-------------CCC-----
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--------LS-------------SFD----- 283 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~--------l~-------------~~~----- 283 (499)
.+|+|||||++|+.+|..|++.+ .+|+++++.. + .| .+.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 38999999999999999999876 7899998752 2 11 011
Q ss_pred -----------HHHHHHHHHHHHhCC--CEEEeC-ceEEEeC--C----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 -----------DRLRHYATTQLSKSG--VRLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 -----------~~~~~~~~~~l~~~g--V~v~~~-~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+++.+++....++.+ ++++.+ +|.+++. + .|++++|+++.+|.||+|+|....
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 235556666666665 567777 7887742 2 477788889999999999997543
No 272
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.56 E-value=0.00014 Score=75.15 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEEE-EE
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (499)
.++|+|||||+.|+.+|..|++.|.+|+|+++...+ . .+ ..++...+.+. +. ..++.++.+ ++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l--~-~~---------d~~~~~~~~~~---l~-~~GV~v~~~~~v 273 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL--R-GF---------DQDMANKIGEH---ME-EHGIKFIRQFVP 273 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--T-TS---------CHHHHHHHHHH---HH-HTTCEEEESEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc--c-cC---------CHHHHHHHHHH---HH-HCCCEEEeCCeE
Confidence 457999999999999999999999999999984211 0 00 01112222222 22 257777653 44
Q ss_pred EEEECC----CCEEEEeee-cCccccCCCceeeeeCCeEEEcCCCCccCC
Q 010845 141 AGIDTD----NHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTF 185 (499)
Q Consensus 141 ~~id~~----~~~v~~~~~-~~~~~~~~~~~~~i~yd~LViAtG~~~~~~ 185 (499)
+.+... ...+.+... .++ ++..++++|.||+|+|..|+..
T Consensus 274 ~~v~~~~~~~~~~~~v~~~~~~g-----~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 274 IKVEQIEAGTPGRLRVVAQSTNS-----EEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp EEEEEEECCTTCEEEEEEEESSS-----SCEEEEEESEEEECSCEEESCS
T ss_pred EEEEEccCCCCceEEEEEEECCC-----cEEEEEECCEEEEecCCcccCC
Confidence 444321 133333221 111 1124678999999999988764
No 273
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.56 E-value=5.6e-05 Score=75.07 Aligned_cols=38 Identities=16% Similarity=0.392 Sum_probs=34.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
+++|+|||||++|+++|..|++.|++|+|+|++++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 36899999999999999999999999999999887643
No 274
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.55 E-value=0.00023 Score=74.41 Aligned_cols=90 Identities=23% Similarity=0.316 Sum_probs=69.0
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC--------------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------------------------------- 279 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l-------------------------------- 279 (499)
.|+|||||++|+-+|..|++.+ .+|+++++....
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 7999999999999999999877 788888863110
Q ss_pred ------C-----C---------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEE--CCC-cEEee
Q 010845 280 ------S-----S---------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLIL--NDG-TEVPY 324 (499)
Q Consensus 280 ------~-----~---------------~-~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~----~v~~--~~g-~~i~~ 324 (499)
. . + ...+.+.+.+.+++.|++++.+ +|++++.+ .|++ .+| +++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a 196 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRA 196 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEe
Confidence 0 0 0 1245666777777789999998 89888653 3455 577 68999
Q ss_pred eEEEEcCCCCc
Q 010845 325 GLLVWSTGVGP 335 (499)
Q Consensus 325 D~vi~a~G~~p 335 (499)
|+||.|.|...
T Consensus 197 ~~vV~ADG~~S 207 (570)
T 3fmw_A 197 RYGVGCDGGRS 207 (570)
T ss_dssp SEEEECSCSSC
T ss_pred CEEEEcCCCCc
Confidence 99999999887
No 275
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.54 E-value=4.6e-05 Score=75.65 Aligned_cols=39 Identities=26% Similarity=0.350 Sum_probs=35.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
...+|+|||||++|+++|..|++.|++|+|+|++++...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 457999999999999999999999999999999887543
No 276
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.54 E-value=0.00034 Score=73.19 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe--C-C---eEEEC--CCc--EEeeeEEEEcCCCCcc
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~~v~--~-~---~v~~~--~g~--~i~~D~vi~a~G~~p~ 336 (499)
+.+.+.+.+++.||+++.+ +|.++. + + +|++. +|+ ++.+|.||+|+|....
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3455566677889999999 888874 2 3 35554 665 6899999999997664
No 277
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.53 E-value=4.3e-05 Score=78.12 Aligned_cols=38 Identities=13% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCC--CeEEEEcCCCCccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVF 99 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g--~~V~lie~~~~~~~ 99 (499)
+++|+|||||++||++|++|++.| ++|+|+|+++....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 579999999999999999999998 99999999876543
No 278
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.53 E-value=3.7e-05 Score=76.26 Aligned_cols=35 Identities=20% Similarity=0.409 Sum_probs=32.2
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCCc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~~ 97 (499)
++|+|||||++|+++|..|++. |++|+|||+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999998 9999999998754
No 279
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.53 E-value=6.1e-05 Score=77.67 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=34.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
+++|+|||||++||++|..|++.|++|+|+|+++....
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 57999999999999999999999999999999987643
No 280
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.53 E-value=2.9e-05 Score=78.87 Aligned_cols=39 Identities=15% Similarity=0.255 Sum_probs=34.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT 100 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~~ 100 (499)
+++|+|||||++||+||..|++.|++|+|+|+++.....
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 468999999999999999999999999999998765433
No 281
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.51 E-value=0.00021 Score=71.40 Aligned_cols=58 Identities=19% Similarity=0.300 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceE---------EEeC--C--eEEECCCcEEeeeEEEEcCCCCcchhcc-cCCC
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVK---------DVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVK-SLDL 344 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~---------~v~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~-~~~l 344 (499)
+...+.+.+++.|++++.+ +|. ++.. + .|.+.+| ++.+|.||+|+|.....+.. .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 4555667778889999988 788 7643 2 2444455 79999999999998765555 4443
No 282
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.50 E-value=3.2e-05 Score=76.25 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=31.9
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
.+|+|||||++|+++|++|++.|++|+|||++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 6899999999999999999999999999998753
No 283
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.50 E-value=4.2e-05 Score=79.76 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999998653
No 284
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.49 E-value=5.6e-05 Score=74.58 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=33.6
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
++|+|||||++|+++|..|++.|++|+|+|++++...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 5899999999999999999999999999999876543
No 285
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.47 E-value=0.00024 Score=69.12 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=30.0
Q ss_pred hCCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCC
Q 010845 296 KSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 296 ~~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
+.|++++.+ +|.+++.+ .|.+.+|+++.+|.||+|++.
T Consensus 121 ~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred hcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 348999999 89988643 356677877899999999873
No 286
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.47 E-value=0.00076 Score=70.04 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=38.6
Q ss_pred HHHHHHHHhCCCEEEeCceEEEeC--C----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 288 HYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 288 ~~~~~~l~~~gV~v~~~~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+.+.+.+++.||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 445556667899999888888753 2 467788888999999999998775
No 287
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.46 E-value=0.00044 Score=71.40 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEE--CCCc--EEeeeEEEEcCCCCcc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLIL--NDGT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~--~~g~--~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+.+.+++.||+++.+ +|+++.. + +|.+ .+|+ ++.+|+||.|+|....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 45556677777899999998 7887754 3 2444 3564 7999999999999874
No 288
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.46 E-value=6.5e-05 Score=73.30 Aligned_cols=34 Identities=26% Similarity=0.175 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|||||+||+.+|..|++.|++|+|||+++
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 3689999999999999999999999999999876
No 289
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.45 E-value=0.00074 Score=67.10 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=29.5
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.|+|||||.+|+-+|..|++.+ .+|+++++..
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G--------------~~V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERG--------------HRVLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCC
Confidence 7999999999999999999887 8999999864
No 290
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.45 E-value=0.00017 Score=73.21 Aligned_cols=91 Identities=16% Similarity=0.151 Sum_probs=67.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC-C----C-------------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-S----S------------------------- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l-~----~------------------------- 281 (499)
+|+|||||++|+.+|..|++.+ .+|+++++.+.. . .
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 7999999999999999998765 677777764210 0 0
Q ss_pred -----------------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEEC---CCc--EEeeeE
Q 010845 282 -----------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILN---DGT--EVPYGL 326 (499)
Q Consensus 282 -----------------------~-~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~---v~~~---~g~--~i~~D~ 326 (499)
+ ...+.+.+.+.+.+.|++++.+ +|++++. +. |++. +|+ ++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 0 1245666777777889999999 8888753 33 4554 665 799999
Q ss_pred EEEcCCCCcc
Q 010845 327 LVWSTGVGPS 336 (499)
Q Consensus 327 vi~a~G~~p~ 336 (499)
||.|+|..+.
T Consensus 154 VV~AdG~~s~ 163 (453)
T 3atr_A 154 VVEATGYSRS 163 (453)
T ss_dssp EEECCGGGCT
T ss_pred EEECcCCchh
Confidence 9999998764
No 291
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.44 E-value=0.00031 Score=69.93 Aligned_cols=92 Identities=16% Similarity=0.260 Sum_probs=63.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cCC-----C--C-CHH---H------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-----S--F-DDR---L------------ 286 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l~-----~--~-~~~---~------------ 286 (499)
.+|+|||||++|+.+|..|++.+ .+|+++++.. ... . + +.. +
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 38999999999999999999876 8999999752 211 0 0 000 0
Q ss_pred ----------------------------------HHHHHHHHHhC--CCEEEeC-ceEEEeCC----eEEECCCcEEeee
Q 010845 287 ----------------------------------RHYATTQLSKS--GVRLVRG-IVKDVDSQ----KLILNDGTEVPYG 325 (499)
Q Consensus 287 ----------------------------------~~~~~~~l~~~--gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D 325 (499)
...+.+.|.+. +++++.+ +|++++.+ .|++.+|+++.+|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad 172 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETAD 172 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEES
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecC
Confidence 00112222221 3567777 78888643 4667888899999
Q ss_pred EEEEcCCCCcc
Q 010845 326 LLVWSTGVGPS 336 (499)
Q Consensus 326 ~vi~a~G~~p~ 336 (499)
+||.|.|..+.
T Consensus 173 ~vV~AdG~~S~ 183 (398)
T 2xdo_A 173 LVILANGGMSK 183 (398)
T ss_dssp EEEECSCTTCS
T ss_pred EEEECCCcchh
Confidence 99999998775
No 292
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.43 E-value=0.001 Score=68.30 Aligned_cols=92 Identities=20% Similarity=0.272 Sum_probs=67.5
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC------------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL------------------------------ 279 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l------------------------------ 279 (499)
.+|+|||||++|+-+|..|++.+ .+|+++++.. ..
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 78 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGG--------------VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVET 78 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccc
Confidence 48999999999999999999866 5566665431 10
Q ss_pred ----------------C-CC-------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEECCCc---EEeeeEE
Q 010845 280 ----------------S-SF-------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT---EVPYGLL 327 (499)
Q Consensus 280 ----------------~-~~-------~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~~g~---~i~~D~v 327 (499)
+ .. ...+.+.+.+.+++.|++++.+ +|.+++. + .+++.+++ ++.+|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 158 (499)
T 2qa2_A 79 STQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYV 158 (499)
T ss_dssp ESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEE
T ss_pred cccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEE
Confidence 0 00 1345666677778889999998 8888854 3 35566664 7999999
Q ss_pred EEcCCCCcc
Q 010845 328 VWSTGVGPS 336 (499)
Q Consensus 328 i~a~G~~p~ 336 (499)
|.|.|....
T Consensus 159 VgADG~~S~ 167 (499)
T 2qa2_A 159 VGCDGGRST 167 (499)
T ss_dssp EECCCTTCH
T ss_pred EEccCcccH
Confidence 999999864
No 293
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.43 E-value=8.1e-05 Score=76.61 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=35.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
.+++|+|||||++||++|..|++.|++|+|+|+++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357999999999999999999999999999999887554
No 294
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.42 E-value=7.5e-05 Score=77.72 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHhccC---CCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~---~g~~V~lie~~~ 95 (499)
+++|||||||++|+++|..|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999999 999999999864
No 295
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.42 E-value=4.8e-05 Score=74.48 Aligned_cols=33 Identities=30% Similarity=0.366 Sum_probs=30.8
Q ss_pred CcEEEECCchHHHHHHHhccCCC------CeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g------~~V~lie~~~ 95 (499)
++|+|||||++|+++|++|++.| .+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999987 8999999975
No 296
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.41 E-value=0.0004 Score=69.10 Aligned_cols=31 Identities=32% Similarity=0.458 Sum_probs=28.7
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
+|+|||||++|+-+|..|++.+ .+|+++|+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~ 33 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERN 33 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecC
Confidence 8999999999999999999987 889999875
No 297
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.40 E-value=0.0001 Score=76.95 Aligned_cols=54 Identities=19% Similarity=0.203 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhC-CCEEEeCceEEEeC--C----eEEECCCcEEeeeEEEEcCCCCcch
Q 010845 284 DRLRHYATTQLSKS-GVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPST 337 (499)
Q Consensus 284 ~~~~~~~~~~l~~~-gV~v~~~~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~p~~ 337 (499)
..+.+.+.+.+++. ||+++.++|++++. + .|.+++|+++.+|.||.|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 46778888888888 99999888888852 2 4667888889999999999987753
No 298
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.40 E-value=8.8e-05 Score=76.04 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=34.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCCCccc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVF 99 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~~~~~ 99 (499)
.+++|+|||||++||++|..|++.| .+|+|+|+++....
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 3579999999999999999999998 79999999987643
No 299
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.39 E-value=7e-05 Score=77.71 Aligned_cols=53 Identities=23% Similarity=0.316 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCceEEEeC--C----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 DRLRHYATTQLSK-SGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 ~~~~~~~~~~l~~-~gV~v~~~~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+.+.+.+++ .||+++.++|++++. + .|.+++|+++.+|.||.|+|....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4567777888888 899999888888753 2 466778778999999999999765
No 300
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.38 E-value=7.5e-05 Score=76.96 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEEC---CCc--EEeeeEEEEcCCCCcchhcc
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILN---DGT--EVPYGLLVWSTGVGPSTLVK 340 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~--~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~ 340 (499)
+..+...+.+.+++.|++++.+ +|+++.. + +|.+. +|+ ++.+|.||.|+|.....+..
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 4567777888888999999998 8888753 2 46663 565 79999999999998775544
No 301
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.38 E-value=5.2e-05 Score=80.92 Aligned_cols=39 Identities=21% Similarity=0.397 Sum_probs=35.2
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcc
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~ 98 (499)
...++|+|||||++||++|..|++.|++|+|+|+++...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 345799999999999999999999999999999987654
No 302
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.36 E-value=7.4e-05 Score=77.20 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=33.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..+|||||||+|||++|..|++.|++|+|||+.+..
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999998754
No 303
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.36 E-value=0.00019 Score=76.29 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=33.0
Q ss_pred CCcEEEECCchHHHHHHHhccC-CCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~~~~~ 97 (499)
+.+|+|||||++||++|..|++ .|++|+|||+.+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4689999999999999999999 99999999988643
No 304
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.35 E-value=0.001 Score=69.70 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--C----eEEEC------CC---------cEEeeeEEEEcCCCCcc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILN------DG---------TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~----~v~~~------~g---------~~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+.+.+++.||+++.+ ++.++.. + +|.+. +| .++.+|.||.|.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 45666777788889999999 8888752 2 25554 33 68999999999999875
No 305
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.34 E-value=0.00066 Score=70.44 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEe--CC----e--EEECCC---cEEeeeEEEEcCCCCc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVD--SQ----K--LILNDG---TEVPYGLLVWSTGVGP 335 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~--~~----~--v~~~~g---~~i~~D~vi~a~G~~p 335 (499)
.+...+.+.+++.|++++.+ +|++++ ++ + +++.++ .++.+|+||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 45666777788889999998 888875 33 3 445555 6899999999999976
No 306
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.34 E-value=0.001 Score=68.36 Aligned_cols=92 Identities=22% Similarity=0.242 Sum_probs=66.8
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC-cC--C---------------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--S--------------------------- 280 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~-~l--~--------------------------- 280 (499)
..|+|||||++|+-+|..|++.+ .+|+++++.. .. +
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 77 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAG--------------VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVET 77 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCB
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccc
Confidence 48999999999999999999866 5666665431 10 0
Q ss_pred ------------------C------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce--EEECCCc---EEeeeEE
Q 010845 281 ------------------S------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGT---EVPYGLL 327 (499)
Q Consensus 281 ------------------~------~-~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~--v~~~~g~---~i~~D~v 327 (499)
. + ...+.+.+.+.+++.|++++.+ +|++++. ++ +++.+++ ++.+|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 157 (500)
T 2qa1_A 78 STQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYL 157 (500)
T ss_dssp CCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEE
T ss_pred cccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEE
Confidence 0 0 1245566677778889999998 8888853 44 4455664 7999999
Q ss_pred EEcCCCCcc
Q 010845 328 VWSTGVGPS 336 (499)
Q Consensus 328 i~a~G~~p~ 336 (499)
|.|.|....
T Consensus 158 VgADG~~S~ 166 (500)
T 2qa1_A 158 VGCDGGRSS 166 (500)
T ss_dssp EECCCTTCH
T ss_pred EECCCcchH
Confidence 999999864
No 307
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.33 E-value=0.00094 Score=70.34 Aligned_cols=92 Identities=14% Similarity=0.300 Sum_probs=65.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC-Cc-------CCC---------------------
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS--------------------- 281 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~-~~-------l~~--------------------- 281 (499)
.+|+|||||+.|+.+|..+++.+ .+|+++++. .. +..
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~g--------------~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~ 173 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKYG--------------AKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSH 173 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHH
T ss_pred ccEEEECCCccHHHHHHHHHhCC--------------CeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHH
Confidence 48999999999999999999877 899999962 10 100
Q ss_pred -----------CC--------HHHHHHH-----------HHHHHhCCCEEEeCceEEEeCCeEEE--CCC--cEEeeeEE
Q 010845 282 -----------FD--------DRLRHYA-----------TTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLL 327 (499)
Q Consensus 282 -----------~~--------~~~~~~~-----------~~~l~~~gV~v~~~~v~~v~~~~v~~--~~g--~~i~~D~v 327 (499)
++ ..+.+++ ...+++.+|+++.+....++...+.+ .+| +++.+|.|
T Consensus 174 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~l 253 (598)
T 2x8g_A 174 ALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKI 253 (598)
T ss_dssp HHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEE
T ss_pred HHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEE
Confidence 00 0111111 12356779999988767777776655 355 46999999
Q ss_pred EEcCCCCcc
Q 010845 328 VWSTGVGPS 336 (499)
Q Consensus 328 i~a~G~~p~ 336 (499)
|+|||.+|.
T Consensus 254 viAtGs~p~ 262 (598)
T 2x8g_A 254 ILATGERPK 262 (598)
T ss_dssp EECCCEEEC
T ss_pred EEeCCCCCC
Confidence 999998876
No 308
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.33 E-value=0.00016 Score=75.89 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=32.8
Q ss_pred CCcEEEECCchHHHHHHHhccCC------CCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~------g~~V~lie~~~~~ 97 (499)
..+|||||||+||+++|..|++. |++|+|||+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 37999999999999999999998 9999999998654
No 309
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.33 E-value=0.00073 Score=70.69 Aligned_cols=51 Identities=10% Similarity=0.022 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe-C--C---eEEEC--CCc--EEeeeEEEEcCCCCcc
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVKDVD-S--Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~~v~-~--~---~v~~~--~g~--~i~~D~vi~a~G~~p~ 336 (499)
+...+.+.+++.||+++++ +|.++. + + +|++. +|+ ++.+|.||+|+|..+.
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 4455666777889999999 888873 2 2 35554 564 6899999999997663
No 310
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.32 E-value=0.00021 Score=76.66 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=66.9
Q ss_pred CCcEEEEC--CchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-E
Q 010845 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-S 138 (499)
Q Consensus 62 ~~~VvIIG--gG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (499)
.++|+||| ||+.|+.+|..|++.|.+|+++++.+.+.-.. ........+.+. +.+ .+++++. .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~----------~~~~~~~~l~~~---l~~-~GV~i~~~~ 588 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT----------NNTFEVNRIQRR---LIE-NGVARVTDH 588 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG----------GGGTCHHHHHHH---HHH-TTCEEEESE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc----------ccchhHHHHHHH---HHH-CCCEEEcCc
Confidence 46799999 99999999999999999999999887532110 000111122222 222 5777766 4
Q ss_pred EEEEEECCCCEEEEeeecCccccCCCceeeeeCCeEEEcCCCCccC
Q 010845 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
+|+.++.+. +.+..... +++.++++|.||+|+|..|+.
T Consensus 589 ~V~~i~~~~--~~v~~~~~------~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 589 AVVAVGAGG--VTVRDTYA------SIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEEEETTE--EEEEETTT------CCEEEEECSEEEEESCEEECC
T ss_pred EEEEEECCe--EEEEEccC------CeEEEEECCEEEECCCCCCCh
Confidence 888998654 33332111 123579999999999998763
No 311
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.31 E-value=8e-05 Score=76.97 Aligned_cols=53 Identities=25% Similarity=0.247 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEeC--C----eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 DRLRHYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~~v~~v~~--~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+.+.+.+++.||+++.++|++++. + .|++.+|+++.+|.||.|+|....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4677778888888999999888888753 2 366788889999999999998765
No 312
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.31 E-value=0.00011 Score=77.51 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=34.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~ 98 (499)
.++|||||||++|+++|..|++.|++|+|||+.+...
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 4799999999999999999999999999999987644
No 313
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.30 E-value=0.00071 Score=74.14 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECCCcEEeeeEEEEcCCCCcchhcccCC
Q 010845 286 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (499)
Q Consensus 286 ~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (499)
+...+.+.+++.|++++.+ +|++++. + .|.+.+| ++.||.||+|+|.....+...++
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g 215 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhC
Confidence 4445566677889999988 8888853 3 3556666 79999999999998765544443
No 314
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.29 E-value=0.00037 Score=68.67 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=28.6
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
.++|+|||||.+|+-+|..|+ .+ .+|+++++.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G--------------~~V~vlE~~ 40 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AH--------------GRVVVLERE 40 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TT--------------SCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CC--------------CCEEEEECC
Confidence 458999999999999999998 46 899999986
No 315
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.28 E-value=8.1e-05 Score=74.47 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~ 95 (499)
..+|+|||||++|+++|+.|++. |++|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 47999999999999999999998 99999999975
No 316
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.28 E-value=5.8e-05 Score=76.55 Aligned_cols=60 Identities=27% Similarity=0.373 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC----------------C----eEEECCCcEE--eeeEEEEcCCCCcchhc
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS----------------Q----KLILNDGTEV--PYGLLVWSTGVGPSTLV 339 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~----------------~----~v~~~~g~~i--~~D~vi~a~G~~p~~~~ 339 (499)
+..+...+.+.+++.|++++.+ +|++++. + +|.+.+| ++ .+|.||+|+|.....++
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~ 258 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLL 258 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHH
Confidence 3478888888999999999998 8988853 2 3556667 68 99999999998876665
Q ss_pred ccCC
Q 010845 340 KSLD 343 (499)
Q Consensus 340 ~~~~ 343 (499)
..++
T Consensus 259 ~~~g 262 (448)
T 3axb_A 259 NPLG 262 (448)
T ss_dssp GGGT
T ss_pred HHcC
Confidence 5544
No 317
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.28 E-value=0.00014 Score=76.04 Aligned_cols=62 Identities=16% Similarity=0.048 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEECC---C--cEEeeeEEEEcCCCCcchhcccCCC
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILND---G--TEVPYGLLVWSTGVGPSTLVKSLDL 344 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~---~v~~~~---g--~~i~~D~vi~a~G~~p~~~~~~~~l 344 (499)
+..+...+.+.+++.|++++.+ +|+++.. + +|.+.+ | .++.+|.||.|+|.....+....+.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~ 241 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRS 241 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCC
Confidence 3567777788888999999998 8888753 3 355543 3 4799999999999887665554443
No 318
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.26 E-value=0.00022 Score=76.24 Aligned_cols=82 Identities=22% Similarity=0.343 Sum_probs=61.4
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcC----------CCCC--HHHHHHHHHHHHhC
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------SSFD--DRLRHYATTQLSKS 297 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l----------~~~~--~~~~~~~~~~l~~~ 297 (499)
.++|+|||||+.|+.+|..|++.+ .+|+++++.+.+ +... .++...+.+.+++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g--------------~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARG--------------HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVT 438 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999998866 899999986322 1111 13445566777888
Q ss_pred CCEEEeC-ceEEEeCCeEEECCCcEE-eeeEEEEcCCCCcc
Q 010845 298 GVRLVRG-IVKDVDSQKLILNDGTEV-PYGLLVWSTGVGPS 336 (499)
Q Consensus 298 gV~v~~~-~v~~v~~~~v~~~~g~~i-~~D~vi~a~G~~p~ 336 (499)
||+++.+ .+.. ..+ .+|.||+|||.+|.
T Consensus 439 gv~~~~~~~v~~-----------~~~~~~d~lviAtG~~p~ 468 (671)
T 1ps9_A 439 GVTLKLNHTVTA-----------DQLQAFDETILASGIVPR 468 (671)
T ss_dssp TCEEEESCCCCS-----------SSSCCSSEEEECCCEEEC
T ss_pred CCEEEeCcEecH-----------HHhhcCCEEEEccCCCcC
Confidence 9999988 4321 123 89999999999876
No 319
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.24 E-value=0.001 Score=66.44 Aligned_cols=91 Identities=21% Similarity=0.298 Sum_probs=64.6
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceE-EEEEeCCCcCCC------C----------------------
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSS------F---------------------- 282 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~-Vtlv~~~~~l~~------~---------------------- 282 (499)
+|+|||||++|+-+|..|++.+ .+ |+++++...... +
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 8999999999999999999876 67 888886421100 0
Q ss_pred ----------------------------------CHHHHHHHHHHHHh-CC-CEEEeC-ceEEEeC-C--eEEECC---C
Q 010845 283 ----------------------------------DDRLRHYATTQLSK-SG-VRLVRG-IVKDVDS-Q--KLILND---G 319 (499)
Q Consensus 283 ----------------------------------~~~~~~~~~~~l~~-~g-V~v~~~-~v~~v~~-~--~v~~~~---g 319 (499)
...+.+.+.+.+++ .| ++++.+ +|++++. + .+++.+ |
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 01344555566655 35 689888 7777752 3 355554 7
Q ss_pred --cEEeeeEEEEcCCCCcc
Q 010845 320 --TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 320 --~~i~~D~vi~a~G~~p~ 336 (499)
+++.+|+||.|.|..+.
T Consensus 152 ~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 152 KPQALGADVLVGADGIHSA 170 (410)
T ss_dssp CEEEEEESEEEECCCTTCH
T ss_pred CceEEecCEEEECCCccch
Confidence 57999999999999875
No 320
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.22 E-value=0.00017 Score=74.93 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..+|||||||+|||++|..|++ |.+|+|||+.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 4799999999999999999999 999999999864
No 321
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.16 E-value=0.00024 Score=71.67 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEe--CCeE--EECCCcEEeeeEEEEcCCCCcc
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~--~~~v--~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+.+.+.+++.|++++++ +|++|. ++.+ +..+|+++.||.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 477788888888899999998 788774 3333 2357889999999999998875
No 322
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.16 E-value=0.0003 Score=76.55 Aligned_cols=84 Identities=12% Similarity=0.209 Sum_probs=51.7
Q ss_pred cccccCCCCCCCCCccceecccCCCccCCCCCCccccccCCCCCCCCCCCCcEEEECCchHHHHHHHhccCCCCeEEEEc
Q 010845 13 AKSYSYSSPSIIMPSNLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVS 92 (499)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie 92 (499)
..|+.++.|+..+.| ..+..+.+|..+....... ..+..........++|+|||||++||++|..|++.|++|+|+|
T Consensus 232 ~~~~~~~~r~~~~~p-~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E 308 (852)
T 2xag_A 232 EATLQQLEAPYNSDT-VLVHRVHSYLERHGLINFG--IYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLE 308 (852)
T ss_dssp HHHHHHCCTTTTSCH-HHHHHHHHHHHHTTSSSCS--SCBCSSCCCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCCcccCCc-HHHHHHHHHHHHHHHHhcC--cccccCCcccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEE
Confidence 446677777766655 3333344443332210000 0000111112345799999999999999999999999999999
Q ss_pred CCCCccc
Q 010845 93 PRNHMVF 99 (499)
Q Consensus 93 ~~~~~~~ 99 (499)
+++....
T Consensus 309 ~~~~~GG 315 (852)
T 2xag_A 309 ARDRVGG 315 (852)
T ss_dssp SSSSSCT
T ss_pred ecCcCCC
Confidence 9876543
No 323
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.15 E-value=0.00019 Score=75.02 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHhCCCEEEeC-ceEEEe--CC---eEEEC---CCc--EEeeeEEEEcCCCCcchhccc
Q 010845 283 DDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQ---KLILN---DGT--EVPYGLLVWSTGVGPSTLVKS 341 (499)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~v~~~-~v~~v~--~~---~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~ 341 (499)
+..+...+.+.+++.|++++.+ +|+++. ++ +|.+. +|+ ++.+|.||.|+|.....+...
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 4566667777788999999998 888875 33 35543 343 799999999999887655443
No 324
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.10 E-value=0.00089 Score=74.41 Aligned_cols=92 Identities=18% Similarity=0.174 Sum_probs=65.7
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC----C-----C----CHHHHHHHHHHHHhC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----S-----F----DDRLRHYATTQLSKS 297 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~----~-----~----~~~~~~~~~~~l~~~ 297 (499)
.+|+|||+|+.|+.+|..+++.+ .+|+++++...+. . + +.++...+.+.+.+.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G--------------~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~ 194 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSG--------------ARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEA 194 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhc
Confidence 48999999999999999999876 8999999863111 1 1 123444555566664
Q ss_pred -CCEEEeC-ceEEEeCCe-----------EEE--------CCCcEEeeeEEEEcCCCCcc
Q 010845 298 -GVRLVRG-IVKDVDSQK-----------LIL--------NDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 298 -gV~v~~~-~v~~v~~~~-----------v~~--------~~g~~i~~D~vi~a~G~~p~ 336 (499)
+|+++.+ +|.++..+. +.+ .++.++.+|.+|+|||..|.
T Consensus 195 ~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~ 254 (965)
T 2gag_A 195 EETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER 254 (965)
T ss_dssp TTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC
T ss_pred CCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC
Confidence 9999988 788776532 111 11236899999999999875
No 325
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.10 E-value=0.00028 Score=74.82 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+|||||||.|||+||..|++.|++|+|||+.+
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 4689999999999999999999999999999875
No 326
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.08 E-value=0.00025 Score=71.92 Aligned_cols=51 Identities=10% Similarity=-0.002 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC---C---eEEECCCcEEeeeEEEEcCCCC
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS---Q---KLILNDGTEVPYGLLVWSTGVG 334 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v~~---~---~v~~~~g~~i~~D~vi~a~G~~ 334 (499)
.++.+.+.+.+++.|++++++ .|++|.. + +|++.+|+++.||.||.+++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 478888889999999999999 8988853 2 4778888899999999999988
No 327
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.07 E-value=0.00024 Score=74.50 Aligned_cols=34 Identities=29% Similarity=0.221 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+|||||||+||+++|..|++.|.+|+|||+.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3689999999999999999999999999999974
No 328
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.06 E-value=0.0003 Score=74.96 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhccC-----CCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-----SLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-----~g~~V~lie~~~~ 96 (499)
+.+|+|||||++||++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4689999999999999999999 9999999998754
No 329
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.06 E-value=0.00028 Score=76.16 Aligned_cols=38 Identities=16% Similarity=0.313 Sum_probs=34.4
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~ 98 (499)
..++|+|||||++|+++|..|++.|++|+|+|+++...
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 45799999999999999999999999999999987644
No 330
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.04 E-value=0.00039 Score=68.83 Aligned_cols=84 Identities=20% Similarity=0.362 Sum_probs=62.9
Q ss_pred cEEEeCcChHHHHHHHHHHHH--HHHHHHHhcCCCCCceEEEEEeCCCcC------------------------CC----
Q 010845 232 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEIL------------------------SS---- 281 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~--~~~~~~~~~~~~~~~~~Vtlv~~~~~l------------------------~~---- 281 (499)
+|+|||||+.|+.+|..|++. + .+|+++++.... ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G--------------~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPL--------------WAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERL 67 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT--------------SEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGG
T ss_pred eEEEECCCHHHHHHHHHHHhcCCC--------------CCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHH
Confidence 799999999999999999987 5 788888864211 00
Q ss_pred ----------------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEECCCcEEeeeEEEEcCC
Q 010845 282 ----------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTG 332 (499)
Q Consensus 282 ----------------------------~~~~~~~~~~~~l~~~gV~v~~~-~v~~v~~~~v~~~~g~~i~~D~vi~a~G 332 (499)
...++.+.+.+.+++.||+++.+ +|++++.. +++.+|+||.|.|
T Consensus 68 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------~~~~ad~vV~AdG 140 (381)
T 3c4a_A 68 NPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------PLADYDLVVLANG 140 (381)
T ss_dssp CCEEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------CGGGCSEEEECCG
T ss_pred hhccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------ccccCCEEEECCC
Confidence 01346667777788889999988 78777542 1357999999999
Q ss_pred CCcc
Q 010845 333 VGPS 336 (499)
Q Consensus 333 ~~p~ 336 (499)
..+.
T Consensus 141 ~~S~ 144 (381)
T 3c4a_A 141 VNHK 144 (381)
T ss_dssp GGGG
T ss_pred CCch
Confidence 8764
No 331
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.04 E-value=0.003 Score=63.55 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=29.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce-EEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~-~Vtlv~~~~ 277 (499)
.|+|||||..|+-+|..|++.+ . +|+++++..
T Consensus 8 dVvIIGgG~aGlsaA~~La~~G--------------~~~V~vlE~~~ 40 (438)
T 3dje_A 8 SLLIVGAGTWGTSTALHLARRG--------------YTNVTVLDPYP 40 (438)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHcC--------------CCcEEEEeCCC
Confidence 7999999999999999999877 7 899999864
No 332
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.04 E-value=0.00029 Score=77.26 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
+.+|||||||++|+++|++|++.|+ +|+|||++..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 4799999999999999999999998 9999999763
No 333
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.04 E-value=0.00034 Score=71.38 Aligned_cols=37 Identities=27% Similarity=0.531 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCCcc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMV 98 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~~~ 98 (499)
.++|+|||||++|+++|..|++.|+ +|+|+|+++...
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 4789999999999999999999998 899999987644
No 334
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.04 E-value=0.004 Score=64.76 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=29.4
Q ss_pred ccEEEeCcChHHHHHHHHHHH---HHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~---~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.+|+|||||+.|.-+|..|++ .+ .+|+|+++..
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~~G--------------~~V~liE~~~ 61 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQGT--------------ADITLLQAPD 61 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTTTS--------------SEEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcCCC--------------CcEEEEeCCC
Confidence 489999999999999999998 44 8999999864
No 335
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.03 E-value=0.00028 Score=74.34 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+|||||||.|||+||..|++.|++|+|||+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 3699999999999999999999999999999874
No 336
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.01 E-value=0.0017 Score=66.68 Aligned_cols=32 Identities=25% Similarity=0.515 Sum_probs=29.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.|+|||||.+|+-+|..|++.+ .+|+++++.+
T Consensus 5 DVvIIGgGi~G~~~A~~La~~G--------------~~V~llE~~~ 36 (501)
T 2qcu_A 5 DLIVIGGGINGAGIAADAAGRG--------------LSVLMLEAQD 36 (501)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CCEEEEECCC
Confidence 7999999999999999999887 8999999864
No 337
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.00 E-value=0.0045 Score=64.01 Aligned_cols=45 Identities=24% Similarity=0.314 Sum_probs=29.2
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.+|+|||||+.|.-+|..|++.... ...-.....+.+|+|+++..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~--~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNV--DKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHE--ETTEECSSCSCEEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhcc--ccccccCCCCCeEEEEeCCC
Confidence 4899999999999999999872100 00000000128999999863
No 338
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.97 E-value=0.0049 Score=63.43 Aligned_cols=32 Identities=38% Similarity=0.512 Sum_probs=28.0
Q ss_pred cEEEeCcChHHHHHHHHHHH---HHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~---~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
+|+|||||++|.-+|..|++ .+ .+|+|+++..
T Consensus 4 dVvIVGgG~aGl~~A~~La~~~~~G--------------~~V~lvE~~~ 38 (511)
T 2weu_A 4 SVVIVGGGTAGWMTASYLKAAFDDR--------------IDVTLVESGN 38 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHGGG--------------SEEEEEEC--
T ss_pred eEEEECCCHHHHHHHHHHHhhcCCC--------------CEEEEEecCC
Confidence 79999999999999999998 55 8999999864
No 339
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.95 E-value=0.00046 Score=73.21 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhcc---C-CCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGID---T-SLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~---~-~g~~V~lie~~~ 95 (499)
..+|||||||+|||+||..|+ + .|.+|+|||+.+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 479999999999999999999 6 899999999976
No 340
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.93 E-value=0.0004 Score=73.66 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhccCC------CCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~------g~~V~lie~~~ 95 (499)
..+|||||||.|||+||..|++. |.+|+|||+..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 47999999999999999999987 99999999864
No 341
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.92 E-value=0.00034 Score=73.55 Aligned_cols=57 Identities=21% Similarity=0.198 Sum_probs=40.3
Q ss_pred CCceeeCCCCCCCCCCCeEEeccccccccCCCCCCCC-chHHHHHHHHHHHHHHHHHHHH
Q 010845 349 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP-ALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 349 ~G~i~vd~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p-~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.|.|.||.+.|| ..|++||+|+|+... ..|...+. .....|.-.|+.+++++...+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g-~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVG-LHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEcccccccc-ccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 478999999999 999999999997411 01222222 2334577779999999877653
No 342
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.91 E-value=0.00044 Score=71.00 Aligned_cols=90 Identities=22% Similarity=0.380 Sum_probs=61.3
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCC-----------CCC---HHHHHHHHHHHHh
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-----------SFD---DRLRHYATTQLSK 296 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~-----------~~~---~~~~~~~~~~l~~ 296 (499)
.+|+|||||+.|+.+|..|++. .+|+++++.+.+. .++ .++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4899999999999999998753 5799999863221 111 22223333333 5
Q ss_pred CCCEEEeC-ceEEEeCC--eEEE---CCCc--EEeeeEEEEcCCCCcc
Q 010845 297 SGVRLVRG-IVKDVDSQ--KLIL---NDGT--EVPYGLLVWSTGVGPS 336 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~--~v~~---~~g~--~i~~D~vi~a~G~~p~ 336 (499)
.||+++.+ .+.+++.+ .+.+ ++++ ++.+|.+|+|+|..|.
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 69999887 67666543 2322 4454 6899999999998875
No 343
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.91 E-value=0.002 Score=67.12 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.|+|||||.+|+-+|..|+..+ .+|+++++.+
T Consensus 20 DVvVIGgGi~Gl~~A~~La~~G--------------~~V~LlEk~d 51 (561)
T 3da1_A 20 DLLVIGGGITGAGIALDAQVRG--------------IQTGLVEMND 51 (561)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CcEEEEECCC
Confidence 7999999999999999999887 8999999863
No 344
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.86 E-value=0.0049 Score=63.42 Aligned_cols=51 Identities=22% Similarity=0.174 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC------eEEECC-Cc--EEeee-EEEEcCCCCc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ------KLILND-GT--EVPYG-LLVWSTGVGP 335 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~~------~v~~~~-g~--~i~~D-~vi~a~G~~p 335 (499)
.+.+.+.+.+++.||+++++ +|+++..+ +|++.+ ++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 45556667777889999999 88887532 455543 33 58996 9999999765
No 345
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.85 E-value=0.00085 Score=72.32 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCcEEEEC--CchHHHHHHHhccCCCCeEEEEcCCCCcccccchhhhhccCCCCCccccchhhhccccccCCCeEEEE-E
Q 010845 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-S 138 (499)
Q Consensus 62 ~~~VvIIG--gG~aGl~aA~~L~~~g~~V~lie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (499)
.++|+||| ||+.|+.+|..|++.|.+|+||++.+ +.-.... ... ...+.+. +. ..+++++. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~--------~~~--~~~~~~~---l~-~~GV~i~~~~ 592 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF--------TLE--YPNMMRR---LH-ELHVEELGDH 592 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH--------TTC--HHHHHHH---HH-HTTCEEECSE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc--------ccc--HHHHHHH---HH-hCCCEEEcCc
Confidence 46899999 99999999999999999999999977 3210000 000 1112221 22 25777765 4
Q ss_pred EEEEEECCCCEEEEeeecCcc-c-----------cCCCceeeeeCCeEEEcCCCCccC
Q 010845 139 HCAGIDTDNHVVHCETVTDEL-R-----------TLEPWKFKISYDKLVIALGAEAST 184 (499)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~~~-~-----------~~~~~~~~i~yd~LViAtG~~~~~ 184 (499)
+++.|+.+ .+.+.....+. . ...++...+++|.||+|+|..|+.
T Consensus 593 ~v~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 593 FCSRIEPG--RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEEEEETT--EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEEEEECC--eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 78888754 34433211110 0 001223359999999999988764
No 346
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.80 E-value=0.00031 Score=74.46 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCC--------CeEEEEcCCC-Cc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL--------YDVVCVSPRN-HM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g--------~~V~lie~~~-~~ 97 (499)
+++|+|||||++||++|+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999887 9999999998 65
No 347
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.72 E-value=0.00071 Score=70.42 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=33.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..++++|||||++|+.+|.+|++.|++|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 457999999999999999999999999999999864
No 348
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.63 E-value=0.0065 Score=61.81 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEe--CCe---EEEC-CCcEEeeeEEEEcCCCCcc
Q 010845 287 RHYATTQLSKSGVRLVRG-IVKDVD--SQK---LILN-DGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 287 ~~~~~~~l~~~gV~v~~~-~v~~v~--~~~---v~~~-~g~~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+.+++.||+++.+ .+ ++. ++. +.+. ++.++.+|.||+|+|..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 344555566789999998 68 874 343 3443 3345789999999999875
No 349
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.59 E-value=0.0049 Score=65.34 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCC--EEEeC-ceEEEeCC------e--EEEC------CC--cEEeeeEEEEcCCCCcc
Q 010845 285 RLRHYATTQLSKSGV--RLVRG-IVKDVDSQ------K--LILN------DG--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV--~v~~~-~v~~v~~~------~--v~~~------~g--~~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+.+.+++.|+ +++.+ +|++++.+ . |+++ +| +++.+|+||.|.|....
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 566677788888876 89988 88887532 2 3443 45 57999999999998764
No 350
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.45 E-value=0.0016 Score=67.30 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhccC-CCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~~~~ 96 (499)
.+|+||||||+||+.+|.+|++ .+++|+|||+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999997 6799999999864
No 351
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.39 E-value=0.016 Score=60.19 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce--EEECC---C--cEEeeeEEEEcCCCCcc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILND---G--TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~--~~--v~~~~---g--~~i~~D~vi~a~G~~p~ 336 (499)
.+.+.+.+.+++. ++.+ +|++++. ++ +++.+ | +++.+|+||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 3445556666655 7777 7888753 33 44544 6 47999999999998753
No 352
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.29 E-value=0.0018 Score=67.10 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
.+|+||||||.||+.+|.+|++ |.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4799999999999999999999 9999999998753
No 353
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.26 E-value=0.0025 Score=66.45 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=32.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~~ 96 (499)
..+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3489999999999999999999987 79999999875
No 354
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.21 E-value=0.0027 Score=65.26 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=33.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..++++|||+|++|+.+|..|.+.|.+|+|||+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4579999999999999999999999999999998753
No 355
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.14 E-value=0.0035 Score=52.17 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 356
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.05 E-value=0.02 Score=59.74 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=29.2
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
.|+|||||.+|+-+|..|++.+ .+|+++++.+
T Consensus 34 DVvVIGgGi~G~~~A~~La~rG--------------~~V~LlE~~~ 65 (571)
T 2rgh_A 34 DLLIIGGGITGAGVAVQAAASG--------------IKTGLIEMQD 65 (571)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCC
Confidence 7999999999999999999887 8999998754
No 357
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.00 E-value=0.003 Score=64.94 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=33.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCcc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~ 98 (499)
.++++|||+|++|+.+|..|++.|.+|+|||+.....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987544
No 358
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.00 E-value=0.0039 Score=64.97 Aligned_cols=35 Identities=11% Similarity=0.254 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCC-CCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~-g~~V~lie~~~ 95 (499)
..+|+||||||.||+.+|.+|.+. +++|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999974 79999999987
No 359
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.95 E-value=0.0056 Score=51.77 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999863
No 360
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.92 E-value=0.0057 Score=51.89 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999865
No 361
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.87 E-value=0.0074 Score=50.18 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.+|+|+|.|..|...|..|.+.|++|++||+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999975
No 362
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.83 E-value=0.016 Score=59.34 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC---C---------eEEECCC-----cEEeeeEEEEcCCCCcc
Q 010845 285 RLRHYATTQLSKSGVRLVRG-IVKDVDS---Q---------KLILNDG-----TEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 285 ~~~~~~~~~l~~~gV~v~~~-~v~~v~~---~---------~v~~~~g-----~~i~~D~vi~a~G~~p~ 336 (499)
++.+|+....++.+..+..+ +|++++. + .|++.++ +++.|+.||+|+|..|.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAK 215 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEEC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCC
Confidence 45666666666767778888 7887742 1 3444433 36889999999998776
No 363
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.74 E-value=0.0069 Score=49.98 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=30.6
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 589999999999999999999999999999854
No 364
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.65 E-value=0.006 Score=63.86 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=33.5
Q ss_pred CCCcEEEECCchHHHHHHHhccC-CCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~~~~~ 97 (499)
..++++|||||++|+.+|..|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 35799999999999999999999 79999999998754
No 365
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.65 E-value=0.0069 Score=62.83 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=32.9
Q ss_pred CCcEEEECCchHHHHHHHhccCC-CCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~-g~~V~lie~~~~~ 97 (499)
.++++|||||.+|+.+|.+|++. +.+|+|||+.+..
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 47999999999999999999997 8999999998653
No 366
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.64 E-value=0.0046 Score=64.29 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHhccC-CCCeEEEEcCCCCc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~-~g~~V~lie~~~~~ 97 (499)
.+|+||||||.||+.+|.+|++ .+++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3689999999999999999998 68999999998654
No 367
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.55 E-value=0.041 Score=58.42 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=19.3
Q ss_pred cEEEeCcChHHHHHHHHHHH
Q 010845 232 HCVVVGGGPTGVEFSGELSD 251 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~ 251 (499)
.|+|||||++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 79999999999999999998
No 368
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.49 E-value=0.0084 Score=47.77 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~ 95 (499)
+++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999864
No 369
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.37 E-value=0.0088 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999863
No 370
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.36 E-value=0.12 Score=55.78 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=29.7
Q ss_pred CCCEEEeC-ceEEEeCC----eEEECCCcEEeeeEEEEcCCC
Q 010845 297 SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 333 (499)
Q Consensus 297 ~gV~v~~~-~v~~v~~~----~v~~~~g~~i~~D~vi~a~G~ 333 (499)
.|++|+++ .|++|+.+ .|++.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 37889988 89999753 356678889999999999853
No 371
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.26 E-value=0.012 Score=54.20 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=30.3
Q ss_pred CCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 362 SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 362 ~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
+.++||++||++. ...+..|+..|+.+|+.|...|+
T Consensus 293 ~~~~v~l~GDa~~----------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL----------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT----------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC----------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 5689999999874 23478899999999999998886
No 372
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.17 E-value=0.015 Score=52.32 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=32.6
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
-+.++|+|||||..|...|..|.+.|.+|+||+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 446799999999999999999999999999999863
No 373
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.99 E-value=0.16 Score=52.90 Aligned_cols=49 Identities=16% Similarity=0.026 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEeC---C---eEEE---CCCc--EEeeeEEEEcCCCCc
Q 010845 287 RHYATTQLSKSGVRLVRG-IVKDVDS---Q---KLIL---NDGT--EVPYGLLVWSTGVGP 335 (499)
Q Consensus 287 ~~~~~~~l~~~gV~v~~~-~v~~v~~---~---~v~~---~~g~--~i~~D~vi~a~G~~p 335 (499)
...+.+.+++.||+++.+ .|.++.. + +|.+ .+|+ ++.++.||+|+|...
T Consensus 146 ~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 146 LHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 334455566779999998 7888742 2 3443 4565 689999999999754
No 374
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.97 E-value=0.036 Score=57.29 Aligned_cols=30 Identities=20% Similarity=0.502 Sum_probs=26.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
.|+|||+|..|+-+|..+++ + .+|+++++.
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G--------------~~V~vlEk~ 39 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-Q--------------HQVIVLSKG 39 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-T--------------SCEEEECSS
T ss_pred CEEEECccHHHHHHHHHHhc-C--------------CcEEEEECC
Confidence 79999999999999999987 6 678888765
No 375
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.90 E-value=0.015 Score=52.28 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=63.5
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 310 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~v~~v~ 310 (499)
++|+|||||.+|...+..|.+.+ .+|+++.+. ..+++ .+..++.+|+++.....
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~-----~~~~l----~~l~~~~~i~~i~~~~~--- 85 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT-----VSAEI----NEWEAKGQLRVKRKKVG--- 85 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS-----CCHHH----HHHHHTTSCEEECSCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC-----CCHHH----HHHHHcCCcEEEECCCC---
Confidence 59999999999999999998876 899999753 23343 33334556877644111
Q ss_pred CCeEEECCCcEEeeeEEEEcCCCCcc-hhcccCCCCCCCCCceeeCC----CCCCCCCCCeEEecccc
Q 010845 311 SQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDE----WLRVPSVQDVFAVGDCS 373 (499)
Q Consensus 311 ~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~----~l~~~~~~~Ifa~GD~a 373 (499)
.+.--.+|+||.|||.... ..+... . +. .+.||- .+-.--.|-++--||..
T Consensus 86 -------~~dL~~adLVIaAT~d~~~N~~I~~~-a---k~-gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 -------EEDLLNVFFIVVATNDQAVNKFVKQH-I---KN-DQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -------GGGSSSCSEEEECCCCTHHHHHHHHH-S---CT-TCEEEC-----CCSEECCEEEEETTEE
T ss_pred -------HhHhCCCCEEEECCCCHHHHHHHHHH-H---hC-CCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 0111248999999998764 322221 1 11 244431 12211357777777755
No 376
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.65 E-value=0.021 Score=57.59 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..++|+|||.|.+|+++|..|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45799999999999999999999999999999875
No 377
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.59 E-value=0.015 Score=54.07 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.++|+|||||-.|...|..|.+.|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999864
No 378
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.34 E-value=0.03 Score=53.95 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
+++|+|||+|..|...|..|+..|+ +|+|+|.+..
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4689999999999999999998887 9999998753
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.34 E-value=0.025 Score=49.24 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCC-CCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~-g~~V~lie~~~ 95 (499)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46899999999999999999998 99999999864
No 380
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.33 E-value=0.024 Score=57.04 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
.++|+|||.|.+|+++|..|.++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 46899999999999999999999999999998764
No 381
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.32 E-value=0.17 Score=53.06 Aligned_cols=48 Identities=19% Similarity=0.070 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCEEEeC-ceEEEe--CC---eEEE---CCCc--EEeeeEEEEcCCCCc
Q 010845 288 HYATTQLSKSGVRLVRG-IVKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGP 335 (499)
Q Consensus 288 ~~~~~~l~~~gV~v~~~-~v~~v~--~~---~v~~---~~g~--~i~~D~vi~a~G~~p 335 (499)
..+.+.+.+.||+++.+ .+.++. ++ +|.+ .+|+ .+.++.||+|+|-..
T Consensus 159 ~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 159 HTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33444455678999988 777763 33 3444 3565 689999999999755
No 382
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.14 E-value=0.027 Score=50.66 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=30.5
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 379999999999999999999999999999864
No 383
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.06 E-value=0.035 Score=54.15 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
|++|+|||||..|..+++.+++.|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57999999999999999999999999999998764
No 384
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.97 E-value=0.051 Score=45.17 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|||+|..|...|..|.+.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 385
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.95 E-value=0.044 Score=52.00 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 386
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.92 E-value=0.041 Score=54.04 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998763
No 387
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.83 E-value=0.039 Score=55.69 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|+|+|-.|...|..|...|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3689999999999999999999999999999873
No 388
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.65 E-value=0.048 Score=51.95 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 456799999999999999999999999999999865
No 389
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.58 E-value=0.046 Score=57.25 Aligned_cols=53 Identities=11% Similarity=0.004 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEE--eC--C---eEEECCCcEEeeeEEEEcCCCCcc
Q 010845 284 DRLRHYATTQLSKSGVRLVRG-IVKDV--DS--Q---KLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 284 ~~~~~~~~~~l~~~gV~v~~~-~v~~v--~~--~---~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
..+.+.+.+.+++.|.+++++ .|.+| ++ + +|.+.+|+++.||.||......|.
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 478888888999999999999 88886 33 2 455677999999999997776664
No 390
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.47 E-value=0.1 Score=50.09 Aligned_cols=73 Identities=16% Similarity=0.165 Sum_probs=53.1
Q ss_pred ccEEEeCcChHHHH-HHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEE
Q 010845 231 LHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKD 308 (499)
Q Consensus 231 ~~vvVvGgG~~gve-~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~ 308 (499)
++|.|||.|.+|+. +|..|.+.+ .+|+..+.... ++ ..+.|++.||+++.+ ....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~----~~-----~~~~L~~~gi~v~~g~~~~~ 61 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMY----PP-----MSTQLEALGIDVYEGFDAAQ 61 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCC----TT-----HHHHHHHTTCEEEESCCGGG
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCC----cH-----HHHHHHhCCCEEECCCCHHH
Confidence 58999999999997 788888877 89999987532 11 235577889998865 2111
Q ss_pred EeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 309 VDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 309 v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+ .. -.+|+||.++|..+.
T Consensus 62 l-------~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 62 L-------DE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp G-------GS---CCCSEEEECTTCCTT
T ss_pred c-------CC---CCCCEEEECCCcCCC
Confidence 1 00 148999999999886
No 391
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.42 E-value=0.075 Score=53.55 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=54.9
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEE
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKD 308 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~v~~ 308 (499)
.++|+|||.|.+|+-+|..|.+.+ .+|+..+..... .+ ...+.|++.||+++.+ ...+
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~--~~-----~~~~~L~~~gi~~~~g~~~~~ 67 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFD--EN-----PTAQSLLEEGIKVVCGSHPLE 67 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGG--GC-----HHHHHHHHTTCEEEESCCCGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCccc--CC-----hHHHHHHhCCCEEEECCChHH
Confidence 469999999999999999999887 899999875310 01 2235678889999876 2110
Q ss_pred EeCCeEEECCCcEEeeeEEEEcCCCCcc
Q 010845 309 VDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (499)
Q Consensus 309 v~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (499)
+ +. + .+|+||.++|..++
T Consensus 68 ~------~~-~---~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 68 L------LD-E---DFCYMIKNPGIPYN 85 (451)
T ss_dssp G------GG-S---CEEEEEECTTSCTT
T ss_pred h------hc-C---CCCEEEECCcCCCC
Confidence 0 00 0 27999999999886
No 392
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.36 E-value=0.043 Score=53.44 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 393
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.33 E-value=0.056 Score=51.92 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHH-HHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCR-LMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~-aA~~L~~~g~~V~lie~~~~ 96 (499)
.+++|.|||.|-+|++ +|..|.++|++|++.|.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4578999999999996 78899999999999998753
No 394
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.25 E-value=0.063 Score=50.37 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 395
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.10 E-value=0.056 Score=51.65 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=31.6
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999999999999999999999999998753
No 396
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.09 E-value=0.057 Score=51.41 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..+|.|||+|.-|...|..++..|++|+|+|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998753
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.01 E-value=0.054 Score=52.68 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=31.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
...+|||+|||.||+.+|+.|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45799999999999999999988898 899999873
No 398
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.91 E-value=0.069 Score=51.04 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
+++|+|||+|..|...|..|...|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999898 999999864
No 399
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=92.89 E-value=0.047 Score=52.33 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=42.1
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCC--------CC-HHHHHHHHHHHHhCCCEE
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS--------FD-DRLRHYATTQLSKSGVRL 301 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~--------~~-~~~~~~~~~~l~~~gV~v 301 (499)
..|+|||+||.|+-+|..|+... .+.+|+++++...+.. ++ ..+...+.+.+++.||++
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r------------~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~ 133 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHhC------------CCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEE
Confidence 47999999999999999997531 1289999998632110 11 112233455677889998
Q ss_pred EeC
Q 010845 302 VRG 304 (499)
Q Consensus 302 ~~~ 304 (499)
..+
T Consensus 134 ~~~ 136 (326)
T 3fpz_A 134 EDE 136 (326)
T ss_dssp EEC
T ss_pred EEC
Confidence 876
No 400
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.88 E-value=0.067 Score=48.45 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCCCcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...++|+|.|| |..|...+..|.+.|++|+++++++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34578999999 9999999999999999999999864
No 401
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.78 E-value=0.071 Score=50.63 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3589999999999999999999999999999864
No 402
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.71 E-value=0.078 Score=49.57 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|.|+|+.|...+..|.+.|++|++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999999865
No 403
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.67 E-value=0.089 Score=52.39 Aligned_cols=36 Identities=22% Similarity=0.211 Sum_probs=32.7
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.+.+|.|||.|+.||..|..|++.|++|+.+|-++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 456799999999999999999999999999999764
No 404
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.58 E-value=0.082 Score=50.59 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=30.8
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 405
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.55 E-value=0.068 Score=51.88 Aligned_cols=34 Identities=35% Similarity=0.377 Sum_probs=31.2
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~ 94 (499)
...+|||+|||.+|..+|+.|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999998888 79999997
No 406
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.55 E-value=0.077 Score=50.76 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 345799999999999999999999999999999864
No 407
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.53 E-value=0.08 Score=51.02 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~ 94 (499)
.++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999974
No 408
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.52 E-value=0.098 Score=46.61 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
.++|.|||+|.-|.+.|..|.+.|++|+++|+++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 409
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.44 E-value=0.085 Score=52.17 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+|+|||+|.+|+.+|..++..|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 410
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.28 E-value=0.079 Score=53.81 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=30.7
Q ss_pred CCcEEEECCchHHHHHHHhccCC--CCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~ 95 (499)
+++|.|||.|+.|+..|..|++. |++|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999887 79999999864
No 411
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.26 E-value=0.09 Score=52.58 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=29.6
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
++|+|||||++|+-+|..|++.+ .+|+++++.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 48999999999999999999987 899999975
No 412
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.08 E-value=0.11 Score=51.11 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=32.3
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
...+|+|||+|.+|+.++..++..|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998753
No 413
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.03 E-value=0.1 Score=50.58 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 414
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.02 E-value=0.1 Score=52.93 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|.|||+|+-|+..|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999864
No 415
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.00 E-value=0.11 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhccCC-CC-eEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTS-LY-DVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~-g~-~V~lie~~~~ 96 (499)
.++|.|||+|+-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998864
No 416
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.97 E-value=0.11 Score=48.55 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 64 ~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
+|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 799999999999999999999999999998753
No 417
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.97 E-value=0.13 Score=51.20 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..++|.|||.|+-|+..|..|++ |++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 44689999999999999999998 99999999874
No 418
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.82 E-value=0.22 Score=50.61 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCccc
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~~~ 99 (499)
|++|||||||++||+||.+|++.|++|+|+|+++....
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 57999999999999999999999999999999987543
No 419
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.79 E-value=0.2 Score=50.21 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=33.3
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
...++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457899999999999999999999999999999764
No 420
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.73 E-value=0.13 Score=49.13 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
+++.+|.|||+|..|.+.|..|...++ +|+|+|.++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 345789999999999999999988888 9999998753
No 421
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.70 E-value=0.13 Score=48.07 Aligned_cols=34 Identities=12% Similarity=0.294 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|.|||+.|-..+..|.+.|++|+++++++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999998864
No 422
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.70 E-value=0.097 Score=52.74 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+.++|+|||||..|...+..|.+.|.+|+||+++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 34789999999999999999999999999999864
No 423
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.70 E-value=0.098 Score=48.05 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 799999874
No 424
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.69 E-value=0.12 Score=50.29 Aligned_cols=34 Identities=24% Similarity=0.140 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..+|+|+|+|.+|+.++..|+..|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999999864
No 425
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.68 E-value=0.15 Score=49.56 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 426
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.63 E-value=0.092 Score=50.00 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=30.0
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999864
No 427
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.62 E-value=0.1 Score=47.34 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=29.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|+|+|..|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999864
No 428
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.61 E-value=0.11 Score=52.07 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|.|||+|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999875
No 429
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.53 E-value=0.15 Score=48.82 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=30.7
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
+++|+|||+|..|...|..|+..|+ +|+|+|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999998887 999999865
No 430
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.51 E-value=0.11 Score=50.07 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCCCCcEEEECC-chHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 58 KANEKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 58 ~~~~~~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
...++++|+|.|| |+.|...+..|.+.|++|+++++.+.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3345678999999 99999999999999999999998753
No 431
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.46 E-value=0.14 Score=49.02 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=31.0
Q ss_pred CcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
++|+|||||..|...|..|+..|+ +|+|+|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999888 9999998753
No 432
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.30 E-value=0.13 Score=51.14 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
+.+|+|||.|..|...|..|.+.|++|++||.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999998753
No 433
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.29 E-value=0.2 Score=51.01 Aligned_cols=32 Identities=34% Similarity=0.439 Sum_probs=29.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
++|+|||||.+|+.+|..|++.+ .+|+++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 58999999999999999999877 889999875
No 434
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.29 E-value=0.16 Score=45.41 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.2
Q ss_pred CCcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|+|.|| |+.|...+..|.+.|++|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 478999996 9999999999999999999999874
No 435
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.27 E-value=0.14 Score=48.64 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.1
Q ss_pred CcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
++|+|||+|..|.+.|..|+..|+ +|+|+|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999998888 999999864
No 436
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.21 E-value=0.16 Score=44.49 Aligned_cols=33 Identities=15% Similarity=0.355 Sum_probs=30.6
Q ss_pred CcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|+|| |..|...+..|.+.|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999864
No 437
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.21 E-value=0.16 Score=48.36 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.1
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~ 94 (499)
+.++|.|||+|..|...|..|+..|+ +|+|+|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45789999999999999999998899 99999986
No 438
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.20 E-value=0.13 Score=45.94 Aligned_cols=34 Identities=32% Similarity=0.314 Sum_probs=30.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999998863
No 439
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.13 E-value=0.17 Score=50.23 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=29.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
+|+|||||.+|+-+|..|++.+ .+|+++|+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G--------------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAG--------------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CceEEEeCCC
Confidence 7999999999999999999877 8999999863
No 440
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=91.12 E-value=0.23 Score=48.60 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.7
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..++|+|||+|.-|..++..+++.|++|+++|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 457899999999999999999999999999998754
No 441
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.10 E-value=0.16 Score=48.51 Aligned_cols=34 Identities=15% Similarity=0.362 Sum_probs=30.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
+.||+|||+|..|.+.|..|...++ +|+|+|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999988877 899999864
No 442
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.10 E-value=0.14 Score=49.55 Aligned_cols=31 Identities=29% Similarity=0.485 Sum_probs=29.2
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
+|+|||||.+|+-+|..|++.+ .+|+++++.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G--------------~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGG--------------HEVLVAEAA 36 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCC
Confidence 7999999999999999999877 899999987
No 443
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.92 E-value=0.14 Score=48.81 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=29.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
.+.||+|||+|..|.+.|..|...+. ++.|+|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34699999999999999999987664 899999753
No 444
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.91 E-value=0.14 Score=49.85 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 64 ~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 445
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.90 E-value=0.12 Score=49.18 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=30.8
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
+.+++|.|||.|.-|...|..|.+.|+ +|+++|+++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 345799999999999999999999999 999999863
No 446
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.89 E-value=0.22 Score=50.26 Aligned_cols=35 Identities=26% Similarity=0.204 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
..++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999875
No 447
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.86 E-value=0.087 Score=47.36 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=31.0
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEE-EcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~l-ie~~~ 95 (499)
.+++|.|||+|.-|...|..|.+.|++|++ +++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 356899999999999999999999999999 77764
No 448
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.86 E-value=0.19 Score=47.98 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
++++|.|||+|..|.+.|..|...++ +|+|+|.++.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 35789999999999999999988777 9999998753
No 449
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.85 E-value=0.17 Score=49.50 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|+|+|..|..+|..|+..|++|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999864
No 450
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.84 E-value=0.2 Score=47.11 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=30.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.+++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3579999999999999999999 999999999875
No 451
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.82 E-value=0.15 Score=49.72 Aligned_cols=32 Identities=41% Similarity=0.496 Sum_probs=29.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
+|+|||||.+|+.+|..|++.+ .+|+++++..
T Consensus 7 dVvIIGgGi~Gl~~A~~La~~G--------------~~V~lle~~~ 38 (382)
T 1y56_B 7 EIVVIGGGIVGVTIAHELAKRG--------------EEVTVIEKRF 38 (382)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCC
Confidence 7999999999999999999876 8899999864
No 452
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.81 E-value=0.19 Score=47.47 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
+++|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998763
No 453
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.77 E-value=0.19 Score=49.66 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 64 ~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999864
No 454
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.71 E-value=0.16 Score=48.40 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~~ 96 (499)
+++|.|||+|..|...|..|+..|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3689999999999999999998888 9999998753
No 455
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.70 E-value=0.15 Score=48.24 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5789999999999999999999999999999864
No 456
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.67 E-value=0.19 Score=48.75 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=28.7
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
.|+|||||.+|+-+|..|++.+ .+|+++++.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~G--------------~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARKG--------------YSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CEEEEEecc
Confidence 7999999999999999999876 899999974
No 457
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.58 E-value=0.64 Score=38.10 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=50.0
Q ss_pred ccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 010845 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 310 (499)
Q Consensus 231 ~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~v~~v~ 310 (499)
.+|+|+|.|..|..+|..|...+ .+|+++++. ++.. +.+++.|+.++.+...+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~-------~~~~----~~~~~~g~~~i~gd~~~~- 61 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETS-------RTRV----DELRERGVRAVLGNAANE- 61 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESC-------HHHH----HHHHHTTCEEEESCTTSH-
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECC-------HHHH----HHHHHcCCCEEECCCCCH-
Confidence 38999999999999999999876 899999985 2222 234557888765411100
Q ss_pred CCeEEECCCcEEeeeEEEEcCCCCc
Q 010845 311 SQKLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 311 ~~~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
.+ +..-..-.+|.+|.+++...
T Consensus 62 --~~-l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 62 --EI-MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp --HH-HHHTTGGGCSEEEECCSCHH
T ss_pred --HH-HHhcCcccCCEEEEECCChH
Confidence 00 00000125899999998654
No 458
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=90.56 E-value=0.18 Score=49.26 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=32.6
Q ss_pred CCCCCCCCCCeEEeccccccccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 010845 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 407 (499)
Q Consensus 356 ~~l~~~~~~~Ifa~GD~a~~~~~~g~~~~p~~~~~A~~~g~~aa~~i~~~~~ 407 (499)
.+|+++..+|+|++|+.+.+ .-...|..||-.|+.|+...+.
T Consensus 321 ~tle~k~~~~Lf~AGqi~G~----------~Gy~eAaa~Gl~AG~naa~~~~ 362 (443)
T 3g5s_A 321 ETLEFREAEGLYAAGVLAGV----------EGYLESAATGFLAGLNAARKAL 362 (443)
T ss_dssp TTSEETTEEEEEECGGGGTB----------CSHHHHHHHHHHHHHHHHHHHT
T ss_pred hhceecCCCCEEECcccccc----------HHHHHHHHhHHHHHHHHHHHhc
Confidence 55666678899999999853 1134788999999999888776
No 459
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.56 E-value=0.16 Score=49.57 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=29.4
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~ 277 (499)
+|+|||||.+|+-+|..|++.+ .+|+++++..
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G--------------~~V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQG--------------VKTLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCC
Confidence 7999999999999999999877 8999999864
No 460
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.55 E-value=0.22 Score=44.19 Aligned_cols=32 Identities=34% Similarity=0.376 Sum_probs=29.7
Q ss_pred cEEEEC-CchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 64 RVVVLG-SGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 64 ~VvIIG-gG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+|+||| +|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 461
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=90.55 E-value=0.34 Score=50.63 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhccCCC--CeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g--~~V~lie~~~ 95 (499)
..+|||||||+||+++|..|++.| .+|+|||+.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 368999999999999999999988 9999999974
No 462
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.55 E-value=0.18 Score=47.63 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 463
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.54 E-value=0.19 Score=44.66 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=30.0
Q ss_pred CcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|+|| |..|...+..|.+.|++|+++++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999999864
No 464
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.52 E-value=0.15 Score=48.19 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=29.6
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
+.+|+|||||..|...|..|...|+ +|+|+|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999998888787 899999865
No 465
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.50 E-value=0.2 Score=46.63 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|+|+|-+|.++|..|.+.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998863
No 466
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.47 E-value=0.24 Score=46.76 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
.++|+|||+|-+|..+|..|.+.|+ +|+|++++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899998863
No 467
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.47 E-value=0.21 Score=46.28 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.++|+|||+|-+|-++|..|.+.|.+|+|++|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999999999999875
No 468
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.45 E-value=0.22 Score=47.34 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
.++|.|||.|.-|.+.|..|++.|+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999864
No 469
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.43 E-value=0.15 Score=51.08 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=30.1
Q ss_pred cEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 64 ~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 470
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.30 E-value=0.23 Score=47.10 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.7
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|||+|.-|...|..|. .|++|+++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 899999999864
No 471
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.29 E-value=0.19 Score=47.20 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=30.3
Q ss_pred CcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+||+|.|| |+.|-..+..|.++|++|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999999 9999999999999999999998864
No 472
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.29 E-value=0.21 Score=50.04 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~ 96 (499)
..+|.|||.|+-|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999999864
No 473
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.26 E-value=0.2 Score=49.06 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...+|+|||+|..|..+|..++..|++|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45789999999999999999999999999999864
No 474
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.24 E-value=0.19 Score=47.10 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=30.8
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 475
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.22 E-value=0.21 Score=45.66 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345789999999999999999999999999999865
No 476
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.19 E-value=0.26 Score=46.71 Aligned_cols=35 Identities=17% Similarity=0.037 Sum_probs=31.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 477
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.18 E-value=0.2 Score=49.81 Aligned_cols=31 Identities=32% Similarity=0.551 Sum_probs=28.8
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
+|+|||||.+|+-+|..|++.+ .+|+++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G--------------~~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAG--------------KKVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHcC--------------CeEEEEecC
Confidence 7999999999999999999887 899999975
No 478
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.18 E-value=0.21 Score=48.86 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=29.8
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
..+|+|||+|.+|+-+|..|.+.+ .+|+++++.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G--------------~~V~VlE~~ 76 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAG--------------HDVTILEAN 76 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTS--------------CEEEEECSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 358999999999999999999876 899999976
No 479
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.14 E-value=0.21 Score=47.36 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=29.9
Q ss_pred CcEEEECCchHHHHHHHhccCCCC-eEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~-~V~lie~~~ 95 (499)
++|+|||+|..|...|..|+..|+ +|+|+|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999988886 999999865
No 480
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.12 E-value=0.19 Score=48.04 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.5
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
..++|+|||+|..|.++|..|...++ +++|+|.+.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 45789999999999999999988776 899999853
No 481
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.11 E-value=0.38 Score=48.12 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHhccCCC-CeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g-~~V~lie~~~ 95 (499)
.+++|||||||++|+++|+.|++.| .+|+|||++.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~ 57 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGH 57 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCC
Confidence 3579999999999999999999999 9999999943
No 482
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.10 E-value=0.27 Score=46.24 Aligned_cols=42 Identities=12% Similarity=0.064 Sum_probs=33.9
Q ss_pred CCCCCCCCCCcEEEECCc---hHHHHHHHhccCCCCeEEEEcCCC
Q 010845 54 LGPTKANEKPRVVVLGSG---WAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 54 ~~~~~~~~~~~VvIIGgG---~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
|.++.....+.|+|.||+ ..|.+.|..|++.|++|++++++.
T Consensus 22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 444444556789999986 789999999999999999998863
No 483
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.00 E-value=0.21 Score=47.62 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=29.8
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
.+.+|+|||+|..|.+.|..|...+. +|+++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999877664 899999864
No 484
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.99 E-value=0.13 Score=48.28 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=30.8
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 485
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.90 E-value=0.22 Score=47.36 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=29.6
Q ss_pred CcEEEECCchHHHHHHHhccCC--CCeEEEEcCCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNH 96 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~--g~~V~lie~~~~ 96 (499)
++|+|||+|..|...|..|+.. +++|+++|.+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 3799999999999999998874 789999999753
No 486
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.83 E-value=0.13 Score=48.60 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=30.5
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|+|||+|--|...|..|.+.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999899999999874
No 487
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.76 E-value=0.23 Score=44.26 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=29.7
Q ss_pred cEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 64 RVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 64 ~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
+|+|.|| |..|...+..|.+.|++|+++++++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999999 9999999999999999999999864
No 488
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=89.74 E-value=0.17 Score=51.04 Aligned_cols=31 Identities=39% Similarity=0.520 Sum_probs=28.3
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCce--EEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~--~Vtlv~~~ 276 (499)
+|+|||||.+|+-+|..|++.+ . +|+++|+.
T Consensus 4 dVvVIGaGiaGLsaA~~L~~~G--------------~~~~V~vlEa~ 36 (477)
T 3nks_A 4 TVVVLGGGISGLAASYHLSRAP--------------CPPKVVLVESS 36 (477)
T ss_dssp EEEEECCBHHHHHHHHHHHTSS--------------SCCEEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHhCC--------------CCCcEEEEeCC
Confidence 8999999999999999999866 6 99999985
No 489
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=89.72 E-value=0.24 Score=50.41 Aligned_cols=31 Identities=26% Similarity=0.517 Sum_probs=27.6
Q ss_pred cEEEeCcChHHHHHHHHHHHH-HHHHHHHhcCCCCCceEEEEEeCC
Q 010845 232 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~-~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
.|+|||||.+|+-+|..|++. + .+|+++|+.
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G--------------~~V~VlE~~ 43 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDG--------------PSWMIVDSN 43 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCC--------------SCEEEEESS
T ss_pred CEEEECCcHHHHHHHHHHHhhCC--------------CCEEEEECC
Confidence 799999999999999999874 4 789999876
No 490
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.69 E-value=0.23 Score=49.99 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=50.6
Q ss_pred cccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 010845 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 309 (499)
Q Consensus 230 ~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~v~~v 309 (499)
.++|+|||||.+|...+..|.+.+ .+|+++... +.+++ .+...+.+|+++.+...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--------------a~V~vi~~~-----~~~~~----~~l~~~~~i~~~~~~~~-- 66 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--------------ARLTVNALT-----FIPQF----TVWANEGMLTLVEGPFD-- 66 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------BEEEEEESS-----CCHHH----HHHHTTTSCEEEESSCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--------------CEEEEEcCC-----CCHHH----HHHHhcCCEEEEECCCC--
Confidence 368999999999999999999877 899999864 22333 23233457877754211
Q ss_pred eCCeEEECCCcEEeeeEEEEcCCCCc
Q 010845 310 DSQKLILNDGTEVPYGLLVWSTGVGP 335 (499)
Q Consensus 310 ~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (499)
.+.--.+|+||.|||...
T Consensus 67 --------~~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 67 --------ETLLDSCWLAIAATDDDT 84 (457)
T ss_dssp --------GGGGTTCSEEEECCSCHH
T ss_pred --------ccccCCccEEEEcCCCHH
Confidence 111114899999999874
No 491
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.63 E-value=0.34 Score=40.61 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.8
Q ss_pred ccccEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCC
Q 010845 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (499)
Q Consensus 229 ~~~~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~ 276 (499)
...+|+|+|+|.+|..+|..|...+ .+|+++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 3468999999999999999998876 789999875
No 492
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.55 E-value=0.24 Score=47.27 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.6
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.+++|.|||+|.-|...|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4578999999999999999999999999999 653
No 493
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.54 E-value=0.23 Score=47.47 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=30.1
Q ss_pred CCcEEEECCchHHHHHHHhccCCCC--eEEEEcCCC
Q 010845 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (499)
Q Consensus 62 ~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~~ 95 (499)
..+|+|||+|..|.+.|..|...|+ +++|+|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999988776 899999853
No 494
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.49 E-value=0.25 Score=47.52 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.7
Q ss_pred CcEEEECCchHHHHHHHhccCCCCeEEEEcCCC
Q 010845 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 63 ~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999999864
No 495
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.41 E-value=0.38 Score=45.92 Aligned_cols=36 Identities=14% Similarity=0.276 Sum_probs=31.8
Q ss_pred CCCCcEEEECC-chHHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGg-G~aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
...++|+|.|| |+.|...+..|.+.|++|++++++.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34568999998 9999999999999999999999854
No 496
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.40 E-value=0.84 Score=43.39 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=49.9
Q ss_pred cEEEeCcChHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCcCCCCCHHHHHHHHHHHHhCCCEEEe-C--ceEE
Q 010845 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVR-G--IVKD 308 (499)
Q Consensus 232 ~vvVvGgG~~gve~A~~l~~~~~~~~~~~~~~~~~~~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~-~--~v~~ 308 (499)
+|+|||+|..|.-+|..|++.+ .+|+++.+++ . +.+++.|+.+.. . ...
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~--------~-----~~i~~~Gl~~~~~~~g~~~- 55 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTG--------------HCVSVVSRSD--------Y-----ETVKAKGIRIRSATLGDYT- 55 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTT--------------CEEEEECSTT--------H-----HHHHHHCEEEEETTTCCEE-
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCCh--------H-----HHHHhCCcEEeecCCCcEE-
Confidence 8999999999999999998866 7999998742 1 345566776654 1 211
Q ss_pred EeCCeEEECCCc-EE-eeeEEEEcCCCCcc
Q 010845 309 VDSQKLILNDGT-EV-PYGLLVWSTGVGPS 336 (499)
Q Consensus 309 v~~~~v~~~~g~-~i-~~D~vi~a~G~~p~ 336 (499)
+.+-.+. .+-+ .. ++|+||+|+-....
T Consensus 56 ~~~~~~~-~~~~~~~~~~DlVilavK~~~~ 84 (320)
T 3i83_A 56 FRPAAVV-RSAAELETKPDCTLLCIKVVEG 84 (320)
T ss_dssp ECCSCEE-SCGGGCSSCCSEEEECCCCCTT
T ss_pred EeeeeeE-CCHHHcCCCCCEEEEecCCCCh
Confidence 1111121 2222 22 68999999876654
No 497
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.31 E-value=0.31 Score=44.87 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=31.4
Q ss_pred CCCCcEEEECC-ch-HHHHHHHhccCCCCeEEEEcCCC
Q 010845 60 NEKPRVVVLGS-GW-AGCRLMKGIDTSLYDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGg-G~-aGl~aA~~L~~~g~~V~lie~~~ 95 (499)
.+.+.|+|.|| |. -|.+.|+.|.+.|++|++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 45678999999 75 99999999999999999998864
No 498
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=89.27 E-value=0.3 Score=47.75 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=33.6
Q ss_pred CCCcEEEECCchHHHHHHHhccCCCCeEEEEcCCCCc
Q 010845 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (499)
Q Consensus 61 ~~~~VvIIGgG~aGl~aA~~L~~~g~~V~lie~~~~~ 97 (499)
..++++|+|||..+...|..++..|++|+++|.++.+
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 3579999999999999999999999999999998764
No 499
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.26 E-value=0.25 Score=44.65 Aligned_cols=36 Identities=11% Similarity=0.223 Sum_probs=31.2
Q ss_pred CCCCcEEEECC-chHHHHHHHhccCCC-CeEEEEcCCC
Q 010845 60 NEKPRVVVLGS-GWAGCRLMKGIDTSL-YDVVCVSPRN 95 (499)
Q Consensus 60 ~~~~~VvIIGg-G~aGl~aA~~L~~~g-~~V~lie~~~ 95 (499)
+.+++|+|.|| |..|...+..|.+.| ++|+++++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 34578999995 999999999999999 8999999864
No 500
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.25 E-value=0.28 Score=46.98 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=30.5
Q ss_pred CCCCcEEEECCchHHHHHHHhccCCCC--eEEEEcCC
Q 010845 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPR 94 (499)
Q Consensus 60 ~~~~~VvIIGgG~aGl~aA~~L~~~g~--~V~lie~~ 94 (499)
....+|.|||+|..|.+.|..|...|+ +++|+|.+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 345799999999999999999887776 89999985
Done!