Query 010847
Match_columns 499
No_of_seqs 314 out of 2663
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 15:31:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 3.4E-44 1.2E-48 346.6 33.0 277 30-345 12-293 (306)
2 1zgk_A Kelch-like ECH-associat 100.0 2.3E-44 7.7E-49 348.2 31.4 277 31-343 26-306 (308)
3 2vpj_A Kelch-like protein 12; 100.0 2.1E-43 7.1E-48 340.3 32.8 285 24-344 6-298 (301)
4 2xn4_A Kelch-like protein 2; s 100.0 4.8E-43 1.6E-47 337.9 33.5 278 31-345 17-298 (302)
5 3ii7_A Kelch-like protein 7; p 100.0 1.2E-41 4.3E-46 328.7 33.7 258 4-295 25-293 (306)
6 2xn4_A Kelch-like protein 2; s 100.0 1.8E-41 6.3E-46 326.8 33.4 255 4-292 31-295 (302)
7 4asc_A Kelch repeat and BTB do 100.0 3E-42 1E-46 334.4 26.6 273 31-345 6-296 (315)
8 1zgk_A Kelch-like ECH-associat 100.0 1.6E-41 5.5E-46 328.2 31.6 255 4-293 40-306 (308)
9 2vpj_A Kelch-like protein 12; 100.0 8.7E-41 3E-45 321.9 32.2 255 4-293 32-297 (301)
10 4asc_A Kelch repeat and BTB do 100.0 1.4E-41 4.8E-46 329.7 26.2 267 4-308 14-305 (315)
11 2woz_A Kelch repeat and BTB do 100.0 9.3E-41 3.2E-45 324.3 29.9 273 31-345 17-306 (318)
12 2woz_A Kelch repeat and BTB do 100.0 1.5E-40 5.2E-45 322.8 28.1 266 4-307 25-314 (318)
13 2uvk_A YJHT; unknown function, 100.0 4.8E-39 1.7E-43 317.5 28.1 277 23-334 5-352 (357)
14 2zwa_A Leucine carboxyl methyl 100.0 2.2E-37 7.4E-42 329.9 29.1 278 23-324 384-694 (695)
15 2uvk_A YJHT; unknown function, 100.0 1.2E-36 4.2E-41 300.2 25.4 251 4-280 32-352 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 8.5E-34 2.9E-38 302.2 24.9 236 80-330 386-641 (695)
17 1k3i_A Galactose oxidase precu 100.0 5.2E-33 1.8E-37 295.9 15.6 317 5-354 168-530 (656)
18 1k3i_A Galactose oxidase precu 100.0 6.5E-31 2.2E-35 279.7 22.4 291 5-323 221-548 (656)
19 3dsm_A Uncharacterized protein 98.3 0.002 7E-08 61.4 31.3 233 44-328 16-257 (328)
20 3dsm_A Uncharacterized protein 98.2 0.0013 4.6E-08 62.7 27.9 237 31-324 55-302 (328)
21 3mbr_X Glutamine cyclotransfer 98.2 0.00092 3.1E-08 60.3 24.6 205 84-323 22-234 (243)
22 3mbr_X Glutamine cyclotransfer 98.1 0.00083 2.8E-08 60.6 21.0 150 31-223 32-182 (243)
23 3nol_A Glutamine cyclotransfer 97.9 0.0044 1.5E-07 56.4 23.2 202 86-322 46-254 (262)
24 2iwa_A Glutamine cyclotransfer 97.9 0.0081 2.8E-07 55.1 24.9 206 86-325 24-238 (266)
25 3nol_A Glutamine cyclotransfer 97.8 0.0038 1.3E-07 56.8 20.1 150 31-224 54-205 (262)
26 3nok_A Glutaminyl cyclase; bet 97.7 0.0019 6.5E-08 58.8 17.1 147 31-223 66-213 (268)
27 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.03 1E-06 55.4 27.8 199 88-325 244-443 (445)
28 1l0q_A Surface layer protein; 97.6 0.0068 2.3E-07 58.8 21.6 225 31-325 3-234 (391)
29 2iwa_A Glutamine cyclotransfer 97.6 0.04 1.4E-06 50.5 25.0 193 31-270 33-237 (266)
30 1l0q_A Surface layer protein; 97.5 0.013 4.4E-07 56.8 21.9 226 31-325 45-276 (391)
31 3bws_A Protein LP49; two-domai 97.5 0.026 9E-07 55.4 23.9 222 4-274 102-338 (433)
32 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.1 3.6E-06 50.2 30.7 205 5-272 115-339 (376)
33 3nok_A Glutaminyl cyclase; bet 97.3 0.02 6.8E-07 52.1 18.6 199 86-322 58-264 (268)
34 3bws_A Protein LP49; two-domai 97.3 0.024 8.1E-07 55.8 20.6 227 46-325 102-335 (433)
35 1p22_A F-BOX/WD-repeat protein 97.2 0.048 1.6E-06 53.8 22.2 222 31-324 144-365 (435)
36 3jrp_A Fusion protein of prote 97.1 0.085 2.9E-06 50.3 21.8 189 31-271 24-241 (379)
37 1gxr_A ESG1, transducin-like e 97.1 0.13 4.5E-06 48.0 22.8 186 31-274 110-300 (337)
38 3hfq_A Uncharacterized protein 97.1 0.1 3.5E-06 49.4 21.9 148 46-225 19-177 (347)
39 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.28 9.6E-06 48.3 26.7 187 91-326 207-393 (445)
40 2hqs_A Protein TOLB; TOLB, PAL 97.0 0.1 3.4E-06 51.3 22.1 224 45-326 159-389 (415)
41 3vgz_A Uncharacterized protein 97.0 0.23 7.8E-06 46.8 27.1 226 44-326 68-305 (353)
42 4ery_A WD repeat-containing pr 97.0 0.21 7.2E-06 46.4 24.7 150 92-273 118-271 (312)
43 3u4y_A Uncharacterized protein 97.0 0.075 2.6E-06 49.9 20.3 263 7-325 24-305 (331)
44 1p22_A F-BOX/WD-repeat protein 97.0 0.12 4E-06 50.9 22.4 182 31-270 184-365 (435)
45 1k8k_C P40, ARP2/3 complex 41 97.0 0.091 3.1E-06 50.0 20.9 148 31-219 21-172 (372)
46 3jro_A Fusion protein of prote 96.9 0.03 1E-06 59.9 18.3 104 31-170 22-133 (753)
47 4aez_A CDC20, WD repeat-contai 96.9 0.15 5E-06 49.6 21.7 220 46-325 157-381 (401)
48 3vgz_A Uncharacterized protein 96.8 0.32 1.1E-05 45.7 28.9 196 31-275 102-308 (353)
49 2ojh_A Uncharacterized protein 96.8 0.097 3.3E-06 47.7 19.1 229 44-327 21-261 (297)
50 3hfq_A Uncharacterized protein 96.8 0.21 7.3E-06 47.2 21.9 234 5-279 20-281 (347)
51 2hqs_A Protein TOLB; TOLB, PAL 96.8 0.057 2E-06 53.1 18.2 199 31-278 191-395 (415)
52 3v9f_A Two-component system se 96.8 0.091 3.1E-06 56.4 21.2 217 4-270 428-656 (781)
53 2z3z_A Dipeptidyl aminopeptida 96.8 0.65 2.2E-05 48.8 28.6 195 108-326 234-437 (706)
54 4a2l_A BT_4663, two-component 96.8 0.3 1E-05 52.4 25.0 188 45-278 427-622 (795)
55 1ri6_A Putative isomerase YBHE 96.8 0.18 6.2E-06 47.2 20.7 236 45-330 60-316 (343)
56 1gxr_A ESG1, transducin-like e 96.7 0.35 1.2E-05 44.9 22.6 186 92-325 108-297 (337)
57 4ery_A WD repeat-containing pr 96.7 0.4 1.4E-05 44.4 25.8 227 31-325 36-269 (312)
58 1jmx_B Amine dehydrogenase; ox 96.6 0.22 7.6E-06 46.8 20.5 158 30-224 11-179 (349)
59 1kb0_A Quinohemoprotein alcoho 96.6 0.88 3E-05 47.8 27.5 124 87-226 72-207 (677)
60 4aez_A CDC20, WD repeat-contai 96.6 0.58 2E-05 45.3 24.6 217 46-325 114-337 (401)
61 3u4y_A Uncharacterized protein 96.6 0.5 1.7E-05 44.1 22.7 234 31-327 11-255 (331)
62 3scy_A Hypothetical bacterial 96.4 0.71 2.4E-05 43.8 28.2 238 5-279 31-302 (361)
63 3jrp_A Fusion protein of prote 96.4 0.16 5.4E-06 48.3 17.6 193 92-325 22-241 (379)
64 1r5m_A SIR4-interacting protei 96.3 0.25 8.5E-06 47.8 19.1 146 92-272 216-363 (425)
65 1k8k_C P40, ARP2/3 complex 41 96.3 0.14 4.7E-06 48.8 17.0 149 92-269 19-172 (372)
66 4gga_A P55CDC, cell division c 96.3 0.88 3E-05 44.3 23.4 223 45-324 125-353 (420)
67 2v71_A Nuclear distribution pr 96.3 0.11 3.9E-06 44.0 13.8 52 427-478 99-154 (189)
68 3mkq_A Coatomer beta'-subunit; 96.2 0.51 1.8E-05 50.4 22.6 187 31-273 26-220 (814)
69 3ow8_A WD repeat-containing pr 96.2 0.8 2.7E-05 42.9 25.9 186 93-324 92-279 (321)
70 3pe7_A Oligogalacturonate lyas 96.2 0.64 2.2E-05 44.4 21.0 209 108-327 167-387 (388)
71 4aow_A Guanine nucleotide-bind 96.2 0.52 1.8E-05 43.9 19.9 193 92-324 139-337 (340)
72 3v9f_A Two-component system se 96.1 0.26 8.7E-06 52.8 19.4 224 46-324 428-656 (781)
73 2xdw_A Prolyl endopeptidase; a 96.1 1.2 4.1E-05 47.0 24.3 235 45-326 151-416 (710)
74 1sq9_A Antiviral protein SKI8; 96.1 0.31 1E-05 46.8 18.4 204 94-325 82-323 (397)
75 3vl1_A 26S proteasome regulato 96.1 0.92 3.1E-05 43.8 21.9 190 92-325 108-323 (420)
76 1vyh_C Platelet-activating fac 96.1 0.87 3E-05 44.3 21.7 106 92-224 161-269 (410)
77 2z3z_A Dipeptidyl aminopeptida 96.1 0.73 2.5E-05 48.4 22.4 154 159-325 234-392 (706)
78 3oja_B Anopheles plasmodium-re 96.0 0.065 2.2E-06 55.6 13.6 9 319-327 349-357 (597)
79 3ow8_A WD repeat-containing pr 96.0 1 3.4E-05 42.2 24.4 185 92-322 133-319 (321)
80 1kb0_A Quinohemoprotein alcoho 96.0 0.89 3E-05 47.7 22.2 120 31-176 79-208 (677)
81 2ad6_A Methanol dehydrogenase 96.0 1.7 5.8E-05 44.5 26.9 124 87-226 57-193 (571)
82 3oja_B Anopheles plasmodium-re 96.0 0.044 1.5E-06 56.9 12.1 8 47-54 77-84 (597)
83 3jro_A Fusion protein of prote 95.9 0.14 4.8E-06 54.7 15.8 107 92-221 20-133 (753)
84 1r5m_A SIR4-interacting protei 95.9 1.3 4.5E-05 42.4 23.6 191 92-324 160-361 (425)
85 4a11_B DNA excision repair pro 95.9 0.32 1.1E-05 46.7 17.1 225 46-325 123-366 (408)
86 1ri6_A Putative isomerase YBHE 95.9 1.2 3.9E-05 41.5 20.8 151 31-225 6-166 (343)
87 3dwl_C Actin-related protein 2 95.8 0.11 3.9E-06 49.7 13.6 150 31-222 24-179 (377)
88 1yiq_A Quinohemoprotein alcoho 95.8 2.3 7.9E-05 44.7 25.7 123 31-175 72-200 (689)
89 3u1c_A Tropomyosin alpha-1 cha 95.8 0.22 7.4E-06 37.9 12.0 49 407-455 28-76 (101)
90 3fm0_A Protein CIAO1; WDR39,SG 95.8 0.26 9E-06 46.7 15.9 185 92-311 27-216 (345)
91 4e54_B DNA damage-binding prot 95.8 0.32 1.1E-05 47.8 17.0 109 92-222 131-242 (435)
92 3scy_A Hypothetical bacterial 95.7 1.4 4.8E-05 41.7 23.0 112 31-169 14-129 (361)
93 3u1c_A Tropomyosin alpha-1 cha 95.7 0.16 5.4E-06 38.7 11.0 70 383-452 11-80 (101)
94 3e5z_A Putative gluconolactona 95.7 1.2 4.2E-05 40.8 24.1 234 31-328 41-290 (296)
95 2xdw_A Prolyl endopeptidase; a 95.7 1.5 5.1E-05 46.2 22.9 211 42-278 95-331 (710)
96 2v66_B Nuclear distribution pr 95.7 0.43 1.5E-05 36.5 13.0 65 417-481 36-104 (111)
97 2v4h_A NF-kappa-B essential mo 95.7 0.15 5.3E-06 38.4 10.3 35 382-416 25-59 (110)
98 2ad6_A Methanol dehydrogenase 95.6 1.7 5.9E-05 44.5 21.8 122 31-175 64-193 (571)
99 2aq5_A Coronin-1A; WD40 repeat 95.5 1.3 4.4E-05 42.7 20.1 201 92-326 93-301 (402)
100 4gqb_B Methylosome protein 50; 95.5 0.83 2.8E-05 43.3 18.3 185 92-324 138-331 (344)
101 3na7_A HP0958; flagellar bioge 95.5 0.2 7E-06 45.5 13.1 10 436-445 103-112 (256)
102 3c5m_A Oligogalacturonate lyas 95.5 1.7 6E-05 41.3 24.6 203 108-328 167-388 (396)
103 2ecf_A Dipeptidyl peptidase IV 95.5 1 3.5E-05 47.5 20.8 110 161-277 264-375 (741)
104 2fxo_A Myosin heavy chain, car 95.5 0.56 1.9E-05 37.4 14.1 22 459-480 102-123 (129)
105 1pjx_A Dfpase, DIISOPROPYLFLUO 95.5 1.5 5.1E-05 40.3 22.9 231 45-325 46-300 (314)
106 2dfs_A Myosin-5A; myosin-V, in 95.5 0.11 3.6E-06 57.3 13.0 16 458-473 1027-1042(1080)
107 3zwl_B Eukaryotic translation 95.5 1.6 5.6E-05 40.8 21.0 158 92-275 85-254 (369)
108 3v7d_B Cell division control p 95.5 2.1 7.3E-05 42.0 28.0 146 142-326 278-423 (464)
109 3ei3_B DNA damage-binding prot 95.5 1.8 6.1E-05 41.2 20.8 187 94-325 87-283 (383)
110 3q7m_A Lipoprotein YFGL, BAMB; 95.4 1.9 6.5E-05 41.1 32.4 224 31-325 55-297 (376)
111 1nir_A Nitrite reductase; hemo 95.4 0.85 2.9E-05 46.5 18.9 194 109-326 248-460 (543)
112 2ynn_A Coatomer subunit beta'; 95.4 1.7 5.7E-05 40.1 20.0 188 92-325 66-260 (304)
113 4a2l_A BT_4663, two-component 95.4 0.37 1.3E-05 51.7 16.8 174 45-254 471-649 (795)
114 1got_B GT-beta; complex (GTP-b 95.3 1.9 6.6E-05 40.4 24.2 135 110-272 165-303 (340)
115 4gga_A P55CDC, cell division c 95.3 1.7 5.8E-05 42.2 20.2 226 31-323 160-394 (420)
116 4e54_B DNA damage-binding prot 95.2 1.3 4.4E-05 43.4 19.1 189 31-272 133-329 (435)
117 2z2n_A Virginiamycin B lyase; 95.2 1.8 6E-05 39.3 27.1 213 46-325 79-296 (299)
118 3dwl_C Actin-related protein 2 95.2 0.1 3.4E-06 50.0 10.6 151 92-271 22-178 (377)
119 3zwl_B Eukaryotic translation 95.2 1.2 4E-05 41.9 18.1 108 92-221 43-152 (369)
120 2eqb_B RAB guanine nucleotide 95.1 0.32 1.1E-05 36.0 10.4 51 406-456 9-59 (97)
121 1jmx_B Amine dehydrogenase; ox 95.1 0.71 2.4E-05 43.2 16.3 159 92-275 10-180 (349)
122 4g56_B MGC81050 protein; prote 95.1 0.71 2.4E-05 44.0 16.4 185 92-324 150-343 (357)
123 3fvz_A Peptidyl-glycine alpha- 95.1 2.2 7.5E-05 39.9 29.3 237 45-324 69-322 (329)
124 2ecf_A Dipeptidyl peptidase IV 95.0 0.67 2.3E-05 49.0 17.5 64 212-277 264-328 (741)
125 2z2n_A Virginiamycin B lyase; 95.0 2 6.7E-05 39.0 22.9 224 31-323 27-254 (299)
126 1ic2_A Tropomyosin alpha chain 95.0 0.35 1.2E-05 35.1 10.3 67 411-480 8-74 (81)
127 1yiq_A Quinohemoprotein alcoho 95.0 4.3 0.00015 42.6 28.6 125 87-226 65-200 (689)
128 3ott_A Two-component system se 94.9 3.8 0.00013 43.5 23.0 189 46-276 393-592 (758)
129 1pjx_A Dfpase, DIISOPROPYLFLUO 94.8 1.1 3.8E-05 41.2 16.6 219 6-271 49-300 (314)
130 2pbi_B Guanine nucleotide-bind 94.8 2.8 9.4E-05 39.7 21.5 136 161-325 177-316 (354)
131 3u59_A Tropomyosin beta chain; 94.8 0.55 1.9E-05 35.7 11.5 47 407-453 28-74 (101)
132 3k26_A Polycomb protein EED; W 94.8 2.2 7.5E-05 39.9 18.9 106 93-222 85-194 (366)
133 2aq5_A Coronin-1A; WD40 repeat 94.8 2.7 9.3E-05 40.3 19.8 151 94-272 145-301 (402)
134 1yfq_A Cell cycle arrest prote 94.8 2.5 8.6E-05 39.2 19.1 104 92-220 67-179 (342)
135 1got_B GT-beta; complex (GTP-b 94.7 2.8 9.6E-05 39.3 26.8 190 92-324 108-301 (340)
136 3azo_A Aminopeptidase; POP fam 94.7 4.6 0.00016 41.7 22.6 193 109-326 161-371 (662)
137 3v7d_B Cell division control p 94.7 3.6 0.00012 40.3 27.2 184 92-322 279-463 (464)
138 3sjl_D Methylamine dehydrogena 94.7 3.3 0.00011 39.9 21.2 124 24-172 39-172 (386)
139 3u59_A Tropomyosin beta chain; 94.7 0.6 2.1E-05 35.4 11.4 66 383-448 11-76 (101)
140 2ojh_A Uncharacterized protein 94.6 0.41 1.4E-05 43.3 12.9 182 6-226 65-264 (297)
141 1w6s_A Methanol dehydrogenase 94.6 4.7 0.00016 41.4 24.3 124 87-226 57-199 (599)
142 2pm9_A Protein WEB1, protein t 94.6 1.8 6.2E-05 41.5 18.1 196 93-325 126-338 (416)
143 3fm0_A Protein CIAO1; WDR39,SG 94.6 3.1 0.00011 39.1 22.1 153 31-226 29-187 (345)
144 1kv9_A Type II quinohemoprotei 94.6 5.3 0.00018 41.7 27.5 123 87-226 61-195 (668)
145 2qc5_A Streptogramin B lactona 94.5 2.6 9E-05 38.1 22.7 224 31-323 32-259 (300)
146 1rwi_B Serine/threonine-protei 94.5 2.6 8.7E-05 37.7 20.9 226 31-324 36-264 (270)
147 2pm9_A Protein WEB1, protein t 94.5 2.3 8E-05 40.7 18.5 156 92-271 78-250 (416)
148 1nir_A Nitrite reductase; hemo 94.4 4.6 0.00016 40.9 21.3 233 31-324 150-402 (543)
149 2v4h_A NF-kappa-B essential mo 94.4 0.43 1.5E-05 36.0 9.7 32 404-435 26-57 (110)
150 1flg_A Protein (quinoprotein e 94.4 4.7 0.00016 41.3 21.4 119 31-175 70-201 (582)
151 3dm0_A Maltose-binding peripla 94.4 5.6 0.00019 41.5 22.9 149 92-274 483-636 (694)
152 3odt_A Protein DOA1; ubiquitin 94.4 2.9 9.8E-05 38.0 21.6 151 143-332 154-304 (313)
153 2bkl_A Prolyl endopeptidase; m 94.4 2.9 9.8E-05 43.9 20.2 150 108-276 201-357 (695)
154 2fxo_A Myosin heavy chain, car 94.2 1.3 4.3E-05 35.4 13.0 95 386-480 18-116 (129)
155 1pby_B Quinohemoprotein amine 94.2 3.3 0.00011 38.1 25.0 143 45-223 11-166 (337)
156 3e5z_A Putative gluconolactona 94.2 2.9 0.0001 38.1 17.8 215 6-272 53-288 (296)
157 3hnw_A Uncharacterized protein 94.2 0.28 9.5E-06 39.6 9.0 48 405-452 71-118 (138)
158 2pm7_B Protein transport prote 94.2 3.3 0.00011 37.9 19.3 63 93-170 67-133 (297)
159 3oja_A Leucine-rich immune mol 94.2 0.6 2.1E-05 46.9 13.7 31 387-417 366-396 (487)
160 2bkl_A Prolyl endopeptidase; m 94.1 2.8 9.4E-05 44.0 19.4 227 24-278 74-315 (695)
161 3g4e_A Regucalcin; six bladed 94.0 1.8 6.2E-05 39.8 16.0 152 45-225 73-234 (297)
162 2hes_X YDR267CP; beta-propelle 94.0 3.9 0.00013 38.1 21.4 194 92-323 118-327 (330)
163 3q8t_A Beclin-1; autophagy, AT 94.0 1.4 4.6E-05 33.0 11.9 43 397-439 13-55 (96)
164 3mkq_A Coatomer beta'-subunit; 94.0 3.8 0.00013 43.5 20.5 187 31-273 68-262 (814)
165 3bg1_A Protein SEC13 homolog; 94.0 2.4 8.2E-05 39.3 16.8 108 31-174 26-142 (316)
166 3pe7_A Oligogalacturonate lyas 93.9 4.4 0.00015 38.4 24.1 202 45-280 60-283 (388)
167 3iuj_A Prolyl endopeptidase; h 93.9 7.3 0.00025 40.8 22.6 235 45-327 155-408 (693)
168 1kv9_A Type II quinohemoprotei 93.8 7.4 0.00025 40.6 23.2 121 31-175 68-195 (668)
169 1vyh_C Platelet-activating fac 93.8 3.7 0.00013 39.7 18.4 145 93-274 120-269 (410)
170 3hnw_A Uncharacterized protein 93.8 0.42 1.4E-05 38.6 9.3 51 403-453 76-126 (138)
171 1w6s_A Methanol dehydrogenase 93.7 6.5 0.00022 40.4 20.7 120 31-176 64-200 (599)
172 4a11_B DNA excision repair pro 93.7 2.4 8.1E-05 40.4 16.8 202 92-326 55-278 (408)
173 4aow_A Guanine nucleotide-bind 93.7 4.2 0.00014 37.5 18.2 101 93-222 185-288 (340)
174 3o0z_A RHO-associated protein 93.7 2 6.9E-05 35.4 13.2 34 403-436 49-82 (168)
175 1qks_A Cytochrome CD1 nitrite 93.7 4 0.00014 41.6 18.9 205 92-325 255-478 (567)
176 3ghg_A Fibrinogen alpha chain; 93.7 0.33 1.1E-05 47.2 9.8 29 420-448 114-142 (562)
177 2vdu_B TRNA (guanine-N(7)-)-me 93.5 4.9 0.00017 39.3 19.0 160 93-274 210-397 (450)
178 4g56_B MGC81050 protein; prote 93.5 0.59 2E-05 44.6 11.8 201 92-325 53-259 (357)
179 1yr2_A Prolyl oligopeptidase; 93.5 3.8 0.00013 43.3 19.3 151 108-276 242-401 (741)
180 3iz6_a 40S ribosomal protein R 93.5 5.4 0.00018 38.0 22.5 184 110-324 181-375 (380)
181 2eqb_B RAB guanine nucleotide 93.4 1.1 3.8E-05 33.2 10.1 54 383-436 7-60 (97)
182 2vdu_B TRNA (guanine-N(7)-)-me 93.4 6.2 0.00021 38.5 20.9 110 92-223 160-274 (450)
183 1yr2_A Prolyl oligopeptidase; 93.3 6.1 0.00021 41.7 20.5 225 25-277 114-359 (741)
184 1qks_A Cytochrome CD1 nitrite 93.3 7.9 0.00027 39.4 23.3 191 31-275 168-378 (567)
185 4gqb_B Methylosome protein 50; 93.3 1.5 5.3E-05 41.4 14.3 191 92-325 92-290 (344)
186 2xyi_A Probable histone-bindin 93.2 0.79 2.7E-05 44.9 12.5 146 146-324 196-353 (430)
187 1m1j_B Fibrinogen beta chain; 93.2 1.5 5E-05 43.0 13.7 19 459-477 173-191 (464)
188 2dg1_A DRP35, lactonase; beta 93.2 5.3 0.00018 36.9 17.9 155 92-270 55-213 (333)
189 3sfz_A APAF-1, apoptotic pepti 93.1 13 0.00044 41.7 23.9 148 94-272 714-873 (1249)
190 3azo_A Aminopeptidase; POP fam 93.1 3.4 0.00012 42.8 17.8 151 108-277 216-376 (662)
191 2qc5_A Streptogramin B lactona 93.0 4.9 0.00017 36.2 25.4 177 45-276 83-265 (300)
192 3i2n_A WD repeat-containing pr 92.9 5.8 0.0002 36.7 19.7 235 31-324 32-291 (357)
193 3c75_H MADH, methylamine dehyd 92.9 7.5 0.00026 38.0 20.8 121 30-173 85-213 (426)
194 2xyi_A Probable histone-bindin 92.9 1 3.4E-05 44.1 12.7 61 143-220 243-309 (430)
195 1flg_A Protein (quinoprotein e 92.8 9.6 0.00033 39.0 24.7 124 87-226 63-201 (582)
196 1erj_A Transcriptional repress 92.8 7 0.00024 37.4 18.6 152 143-324 134-287 (393)
197 1erj_A Transcriptional repress 92.7 7.3 0.00025 37.2 25.4 105 92-223 134-241 (393)
198 3vkg_A Dynein heavy chain, cyt 92.6 0.65 2.2E-05 56.6 12.4 12 6-17 1252-1263(3245)
199 1sq9_A Antiviral protein SKI8; 92.5 5.3 0.00018 37.8 17.1 109 87-220 20-157 (397)
200 3vkg_A Dynein heavy chain, cyt 92.4 0.89 3E-05 55.4 13.1 14 48-61 1252-1265(3245)
201 3vl1_A 26S proteasome regulato 92.4 8 0.00027 37.0 24.4 104 143-270 258-365 (420)
202 2jee_A YIIU; FTSZ, septum, coi 92.3 1.3 4.4E-05 31.6 8.7 13 461-473 62-74 (81)
203 2v66_B Nuclear distribution pr 92.3 3 0.0001 31.9 11.9 75 383-457 12-90 (111)
204 1q7f_A NHL, brain tumor CG1071 92.3 6.2 0.00021 35.5 27.7 191 92-324 88-280 (286)
205 3odt_A Protein DOA1; ubiquitin 92.2 6.4 0.00022 35.6 20.5 183 92-325 70-256 (313)
206 4ggc_A P55CDC, cell division c 92.1 6.7 0.00023 35.6 19.9 92 211-323 221-314 (318)
207 2ece_A 462AA long hypothetical 92.1 9.8 0.00033 37.3 21.9 283 27-323 23-351 (462)
208 3sfz_A APAF-1, apoptotic pepti 92.0 3.8 0.00013 46.1 17.6 189 92-326 972-1160(1249)
209 3g4e_A Regucalcin; six bladed 91.9 7.3 0.00025 35.6 21.1 196 31-275 26-234 (297)
210 1f5n_A Interferon-induced guan 91.9 1 3.6E-05 46.0 11.3 13 414-426 478-490 (592)
211 3ol1_A Vimentin; structural ge 91.8 2 6.7E-05 33.7 10.5 14 458-471 87-100 (119)
212 3k26_A Polycomb protein EED; W 91.8 8.1 0.00028 35.8 24.4 65 92-170 127-193 (366)
213 3bas_A Myosin heavy chain, str 91.7 2.1 7.1E-05 31.5 9.9 29 456-484 58-86 (89)
214 3tnu_B Keratin, type II cytosk 91.7 1 3.6E-05 35.9 9.0 22 404-425 45-66 (129)
215 3cvf_A Homer-3, homer protein 91.7 0.68 2.3E-05 33.0 6.8 10 462-471 49-58 (79)
216 3i2n_A WD repeat-containing pr 91.7 6.5 0.00022 36.4 16.5 153 93-274 31-203 (357)
217 2jee_A YIIU; FTSZ, septum, coi 91.7 2.1 7.2E-05 30.5 9.3 15 407-421 25-39 (81)
218 3mmy_A MRNA export factor; mRN 91.7 8.3 0.00028 35.7 18.5 90 46-171 109-201 (368)
219 3tul_A Cell invasion protein S 91.6 1.9 6.4E-05 34.2 9.7 57 425-481 64-127 (158)
220 3cve_A Homer protein homolog 1 91.5 1.5 5E-05 30.6 8.2 10 462-471 43-52 (72)
221 1go4_E MAD1 (mitotic arrest de 91.5 0.54 1.8E-05 35.1 6.4 29 404-432 14-42 (100)
222 1rwi_B Serine/threonine-protei 91.5 7.2 0.00025 34.6 18.7 187 92-325 34-223 (270)
223 4gkw_A Spindle assembly abnorm 91.4 3.4 0.00012 31.9 10.8 33 412-444 49-81 (167)
224 3mq9_A Bone marrow stromal ant 91.4 2.5 8.7E-05 42.0 13.6 9 141-149 112-120 (471)
225 4h22_A Leucine-rich repeat fli 91.3 1.6 5.4E-05 32.5 8.7 53 403-455 31-83 (103)
226 3bg1_A Protein SEC13 homolog; 91.1 3.3 0.00011 38.3 13.5 111 92-225 24-142 (316)
227 1qhu_A Protein (hemopexin); be 91.0 13 0.00044 36.7 18.0 143 92-270 158-331 (460)
228 3mmy_A MRNA export factor; mRN 90.9 9.8 0.00034 35.2 22.3 102 92-222 97-201 (368)
229 3jsv_C NF-kappa-B essential mo 90.9 1.1 3.9E-05 32.7 7.4 31 385-415 6-36 (94)
230 1x79_B RAB GTPase binding effe 90.9 3.9 0.00013 31.2 10.7 24 429-452 44-67 (112)
231 3c5m_A Oligogalacturonate lyas 90.7 11 0.00038 35.4 23.7 151 159-328 167-333 (396)
232 1pby_B Quinohemoprotein amine 90.7 4.1 0.00014 37.4 13.8 92 161-274 220-314 (337)
233 3i00_A HIP-I, huntingtin-inter 90.6 0.92 3.1E-05 35.4 7.3 7 383-389 17-23 (120)
234 3lrv_A PRE-mRNA-splicing facto 90.6 11 0.00037 35.1 25.1 191 31-272 49-246 (343)
235 1f5n_A Interferon-induced guan 90.6 1.8 6.1E-05 44.2 11.6 13 472-484 571-583 (592)
236 3jsv_C NF-kappa-B essential mo 90.6 2.2 7.4E-05 31.3 8.6 25 406-430 6-30 (94)
237 3ei3_B DNA damage-binding prot 90.5 12 0.0004 35.3 19.9 187 31-272 87-284 (383)
238 2ocy_A RAB guanine nucleotide 90.4 5.2 0.00018 32.6 11.8 37 416-452 51-87 (154)
239 2pm7_B Protein transport prote 90.3 5.2 0.00018 36.5 14.0 107 92-221 20-133 (297)
240 2pbi_B Guanine nucleotide-bind 90.2 12 0.00042 35.0 20.7 135 109-272 176-317 (354)
241 3tnu_B Keratin, type II cytosk 90.0 1.7 5.7E-05 34.7 8.7 13 459-471 87-99 (129)
242 2oiz_A Aromatic amine dehydrog 89.9 13 0.00045 35.1 24.2 119 30-172 16-143 (361)
243 2ocy_A RAB guanine nucleotide 89.9 6 0.00021 32.2 11.8 13 422-434 78-90 (154)
244 3ghg_A Fibrinogen alpha chain; 89.9 2.9 9.9E-05 40.8 11.5 10 436-445 116-125 (562)
245 2i1j_A Moesin; FERM, coiled-co 89.6 0.27 9.4E-06 50.2 4.6 9 262-270 224-232 (575)
246 1yfq_A Cell cycle arrest prote 89.5 12 0.00042 34.3 16.1 144 92-270 22-179 (342)
247 3ju4_A Endo-N-acetylneuraminid 89.5 5.8 0.0002 37.8 12.8 133 83-219 339-513 (670)
248 3vp9_A General transcriptional 89.4 0.82 2.8E-05 33.5 5.7 49 403-451 22-71 (92)
249 3oja_A Leucine-rich immune mol 89.4 1.3 4.6E-05 44.3 9.5 22 405-426 370-391 (487)
250 2dg1_A DRP35, lactonase; beta 89.3 9.9 0.00034 35.0 15.3 205 31-276 57-269 (333)
251 3ibp_A Chromosome partition pr 89.2 3.7 0.00013 37.1 10.9 78 399-480 21-102 (302)
252 3tnu_A Keratin, type I cytoske 89.2 1.5 5.2E-05 35.0 7.8 36 415-450 37-72 (131)
253 1itv_A MMP9; adaptive molecula 88.9 10 0.00035 32.4 16.6 149 87-272 11-176 (195)
254 1m1j_B Fibrinogen beta chain; 88.8 5.9 0.0002 38.8 13.1 11 383-393 102-112 (464)
255 3lay_A Zinc resistance-associa 88.8 2.2 7.5E-05 35.8 8.8 10 425-434 94-103 (175)
256 3cvf_A Homer-3, homer protein 88.8 2.1 7.2E-05 30.4 7.3 26 409-434 13-38 (79)
257 1deq_A Fibrinogen (alpha chain 88.7 4.6 0.00016 37.7 11.6 14 381-394 67-80 (390)
258 2gop_A Trilobed protease; beta 88.7 15 0.00051 33.9 21.6 140 109-276 152-297 (347)
259 1q7f_A NHL, brain tumor CG1071 88.6 13 0.00045 33.3 23.4 195 92-324 40-238 (286)
260 3iuj_A Prolyl endopeptidase; h 88.5 26 0.00088 36.5 20.3 148 109-279 259-414 (693)
261 3f3f_A Nucleoporin SEH1; struc 88.3 15 0.00051 33.4 23.2 63 93-170 71-144 (351)
262 2mad_H Methylamine dehydrogena 88.2 18 0.00062 34.4 29.1 118 30-173 33-160 (373)
263 4ggc_A P55CDC, cell division c 88.0 15 0.00051 33.2 23.4 137 45-222 45-183 (318)
264 3a7p_A Autophagy protein 16; c 87.7 8.6 0.0003 31.0 11.1 30 404-433 77-106 (152)
265 3iox_A AGI/II, PA; alpha helix 87.6 11 0.00039 36.6 13.9 23 458-480 84-106 (497)
266 2b9c_A Striated-muscle alpha t 87.4 9 0.00031 31.1 11.4 47 412-458 69-115 (147)
267 3ju4_A Endo-N-acetylneuraminid 87.0 22 0.00074 34.0 19.5 123 77-204 278-406 (670)
268 3qh9_A Liprin-beta-2; coiled-c 87.0 6.3 0.00022 27.8 8.7 8 464-471 57-64 (81)
269 2ece_A 462AA long hypothetical 87.0 24 0.00083 34.5 18.3 130 95-227 150-296 (462)
270 3ott_A Two-component system se 86.8 9.3 0.00032 40.4 14.7 142 92-269 482-625 (758)
271 2ynn_A Coatomer subunit beta'; 86.8 18 0.00062 32.9 16.9 147 92-271 24-173 (304)
272 2i1j_A Moesin; FERM, coiled-co 86.6 0.21 7.3E-06 51.0 1.6 9 300-308 253-261 (575)
273 2e7s_A RAB guanine nucleotide 86.6 4.2 0.00014 32.1 8.6 50 407-456 30-79 (135)
274 3f3f_A Nucleoporin SEH1; struc 86.2 19 0.00066 32.6 18.6 108 92-222 22-145 (351)
275 3dr2_A Exported gluconolactona 86.2 20 0.00067 32.7 21.5 165 92-277 96-274 (305)
276 3frx_A Guanine nucleotide-bind 86.1 20 0.0007 32.8 22.7 104 92-222 118-229 (319)
277 1pgu_A Actin interacting prote 85.9 31 0.001 34.7 22.5 111 146-274 175-287 (615)
278 2w83_C C-JUN-amino-terminal ki 85.6 3.7 0.00013 28.6 6.8 67 381-454 9-75 (77)
279 3k29_A Putative uncharacterize 85.5 14 0.00047 30.2 13.6 6 405-410 58-63 (169)
280 2ghs_A AGR_C_1268P; regucalcin 85.4 23 0.00078 32.7 23.5 146 31-219 62-209 (326)
281 2e7s_A RAB guanine nucleotide 85.3 2.3 8E-05 33.6 6.5 34 402-435 46-79 (135)
282 2ghs_A AGR_C_1268P; regucalcin 85.3 23 0.00079 32.7 17.6 146 144-323 61-209 (326)
283 1x79_B RAB GTPase binding effe 85.2 11 0.00037 28.8 10.7 20 438-457 46-65 (112)
284 3dm0_A Maltose-binding peripla 85.0 39 0.0013 35.0 19.4 149 143-325 441-593 (694)
285 2xdj_A Uncharacterized protein 85.0 6.2 0.00021 28.5 8.2 27 431-457 28-54 (83)
286 4gkw_A Spindle assembly abnorm 84.9 12 0.0004 29.0 10.9 34 401-434 45-78 (167)
287 3gre_A Serine/threonine-protei 84.9 28 0.00095 33.3 19.7 107 92-222 181-294 (437)
288 1pex_A Collagenase-3, MMP-13; 84.9 18 0.00063 31.2 18.1 153 87-274 28-196 (207)
289 1k32_A Tricorn protease; prote 84.8 42 0.0014 36.9 19.2 145 110-277 318-468 (1045)
290 2efr_A General control protein 84.8 15 0.0005 30.0 13.3 22 436-457 69-90 (155)
291 2xbg_A YCF48-like protein; pho 84.7 25 0.00085 32.6 26.4 153 91-278 131-287 (327)
292 3mq9_A Bone marrow stromal ant 84.6 5.6 0.00019 39.5 10.9 25 454-478 443-467 (471)
293 3c7x_A Matrix metalloproteinas 84.6 18 0.00062 30.9 14.1 155 87-272 10-177 (196)
294 3no2_A Uncharacterized protein 84.1 24 0.00081 31.8 21.8 185 31-275 6-202 (276)
295 2gop_A Trilobed protease; beta 84.0 26 0.00088 32.2 19.6 100 159-277 151-258 (347)
296 2hes_X YDR267CP; beta-propelle 83.0 29 0.00098 31.9 20.0 159 91-279 23-193 (330)
297 3ol1_A Vimentin; structural ge 82.6 15 0.00052 28.5 12.3 12 442-453 88-99 (119)
298 4dci_A Uncharacterized protein 82.2 12 0.0004 30.4 9.7 24 458-481 81-104 (150)
299 3no2_A Uncharacterized protein 82.2 28 0.00097 31.3 19.7 149 93-275 5-161 (276)
300 1l8d_A DNA double-strand break 82.0 7.3 0.00025 29.9 8.4 14 462-475 86-99 (112)
301 2yy0_A C-MYC-binding protein; 81.9 2.2 7.5E-05 27.9 4.3 29 425-453 21-49 (53)
302 2fp8_A Strictosidine synthase; 81.3 13 0.00044 34.3 11.5 139 109-270 165-313 (322)
303 3cve_A Homer protein homolog 1 81.0 12 0.0004 26.1 9.1 27 409-435 7-33 (72)
304 3dr2_A Exported gluconolactona 81.0 23 0.00078 32.2 13.1 156 92-272 56-226 (305)
305 2qyw_A Vesicle transport throu 80.8 16 0.00054 27.5 9.7 72 404-477 28-101 (102)
306 2efr_A General control protein 80.5 22 0.00075 29.0 13.9 29 425-453 79-107 (155)
307 4etp_A Kinesin-like protein KA 80.5 4.7 0.00016 39.1 8.1 37 422-458 9-45 (403)
308 1pgu_A Actin interacting prote 80.4 50 0.0017 33.0 21.5 103 93-221 456-573 (615)
309 3qh9_A Liprin-beta-2; coiled-c 80.3 7.7 0.00026 27.4 6.8 23 403-425 27-49 (81)
310 1t3j_A Mitofusin 1; coiled coi 80.1 7.8 0.00027 28.6 7.2 40 441-480 51-90 (96)
311 1vcs_A Vesicle transport throu 80.1 12 0.00041 28.2 8.6 59 422-482 37-95 (102)
312 1uix_A RHO-associated kinase; 79.9 12 0.00043 25.8 7.7 23 412-434 7-29 (71)
313 4h5i_A Guanine nucleotide-exch 79.9 40 0.0014 31.6 19.9 144 46-223 158-303 (365)
314 3lrv_A PRE-mRNA-splicing facto 79.6 38 0.0013 31.2 25.0 105 92-222 138-246 (343)
315 3a7p_A Autophagy protein 16; c 79.4 23 0.00078 28.5 11.1 55 403-457 69-123 (152)
316 1xfd_A DIP, dipeptidyl aminope 78.7 64 0.0022 33.3 18.3 66 160-226 228-295 (723)
317 3fvz_A Peptidyl-glycine alpha- 78.7 40 0.0014 30.9 28.9 157 92-269 154-321 (329)
318 3iz6_a 40S ribosomal protein R 78.4 45 0.0015 31.3 24.6 150 92-270 217-375 (380)
319 2aze_A Transcription factor DP 78.4 6.7 0.00023 31.8 7.0 42 425-466 7-48 (155)
320 2p9w_A MAL S 1 allergenic prot 78.2 44 0.0015 31.2 13.6 144 92-255 147-305 (334)
321 1gen_A Gelatinase A; hydrolase 77.8 34 0.0012 29.7 18.1 154 86-272 34-204 (218)
322 1fxk_A Prefoldin; archaeal pro 77.6 17 0.00057 27.4 9.1 18 407-424 13-30 (107)
323 1gmj_A ATPase inhibitor; coile 77.0 11 0.00037 27.0 6.9 12 455-466 59-70 (84)
324 2xzm_R RACK1; ribosome, transl 76.9 46 0.0016 30.6 20.8 21 194-219 223-243 (343)
325 2ymu_A WD-40 repeat protein; u 76.6 63 0.0022 32.1 20.5 180 92-323 355-538 (577)
326 1lwu_C Fibrinogen gamma chain; 76.4 3.8 0.00013 38.1 5.8 23 425-447 28-50 (323)
327 3iox_A AGI/II, PA; alpha helix 76.4 33 0.0011 33.5 12.3 25 454-478 73-97 (497)
328 1m1j_A Fibrinogen alpha subuni 76.3 33 0.0011 33.0 12.0 15 381-395 65-79 (491)
329 1go4_E MAD1 (mitotic arrest de 76.3 14 0.00049 27.5 7.7 28 419-446 15-42 (100)
330 3m91_A Proteasome-associated A 75.6 12 0.00041 24.1 6.2 22 458-479 27-48 (51)
331 4a5s_A Dipeptidyl peptidase 4 75.1 66 0.0023 33.6 16.0 17 109-125 92-108 (740)
332 1t6f_A Geminin; coiled-coil, c 75.1 7.4 0.00025 22.5 4.5 25 454-478 7-31 (37)
333 2zqm_A Prefoldin beta subunit 75.0 26 0.00089 26.8 10.6 21 458-478 88-108 (117)
334 3c3f_A Alpha/beta peptide with 74.9 5.1 0.00017 22.8 3.7 26 456-481 3-28 (34)
335 2lw9_A Unconventionnal myosin- 74.9 5.5 0.00019 24.9 4.2 18 454-471 6-23 (51)
336 3o4h_A Acylamino-acid-releasin 74.7 73 0.0025 31.9 16.4 139 109-275 90-232 (582)
337 1xfd_A DIP, dipeptidyl aminope 74.6 45 0.0015 34.5 14.5 109 110-226 38-149 (723)
338 1qhu_A Protein (hemopexin); be 74.4 62 0.0021 31.7 14.3 59 195-271 158-216 (460)
339 2xe4_A Oligopeptidase B; hydro 74.4 75 0.0026 33.4 16.2 142 109-268 247-398 (751)
340 2oxj_A Hybrid alpha/beta pepti 74.0 5.5 0.00019 22.7 3.7 27 456-482 3-29 (34)
341 3m91_A Proteasome-associated A 74.0 8 0.00027 24.9 5.1 29 408-436 15-43 (51)
342 4fi5_A Nucleoprotein; structur 73.9 21 0.00072 26.9 8.0 11 383-393 24-34 (113)
343 3gre_A Serine/threonine-protei 73.8 52 0.0018 31.3 13.9 68 143-224 181-249 (437)
344 3a2a_A Voltage-gated hydrogen 73.8 11 0.00039 24.2 5.6 9 437-445 25-33 (58)
345 1m1j_C Fibrinogen gamma chain; 73.7 19 0.00066 34.6 10.1 18 436-453 90-107 (409)
346 1deq_A Fibrinogen (alpha chain 73.6 38 0.0013 31.7 11.5 10 454-463 148-157 (390)
347 3ljm_A Coil Ser L9C; de novo d 73.2 6.5 0.00022 21.0 3.7 21 434-454 5-25 (31)
348 1nr0_A Actin interacting prote 73.0 84 0.0029 31.8 22.5 107 195-324 459-567 (611)
349 3lay_A Zinc resistance-associa 73.0 20 0.00069 30.0 8.8 11 460-470 119-129 (175)
350 3o4h_A Acylamino-acid-releasin 72.7 35 0.0012 34.4 12.8 113 90-224 119-231 (582)
351 4dyl_A Tyrosine-protein kinase 72.7 14 0.00049 35.7 9.2 82 397-480 311-392 (406)
352 3m9b_A Proteasome-associated A 72.4 4.4 0.00015 35.8 4.9 22 459-480 73-94 (251)
353 2oqq_A Transcription factor HY 72.3 8.1 0.00028 23.3 4.4 18 418-435 19-36 (42)
354 4h5i_A Guanine nucleotide-exch 72.0 65 0.0022 30.1 24.0 183 109-324 157-343 (365)
355 3ghg_C Fibrinogen gamma chain; 71.3 35 0.0012 32.7 11.2 6 384-389 41-46 (411)
356 3fpp_A Macrolide-specific effl 70.9 17 0.00059 34.0 9.3 17 462-478 129-145 (341)
357 2xbg_A YCF48-like protein; pho 70.6 66 0.0023 29.6 26.6 201 85-331 82-286 (327)
358 3hhm_B NISH2 P85alpha; PI3KCA, 69.9 77 0.0026 30.1 13.5 31 425-455 200-230 (373)
359 1m1j_C Fibrinogen gamma chain; 69.6 54 0.0018 31.5 12.2 23 432-454 93-115 (409)
360 1kd8_B GABH BLL, GCN4 acid bas 69.4 7.9 0.00027 22.4 3.7 24 457-480 4-27 (36)
361 2k48_A Nucleoprotein; viral pr 68.7 33 0.0011 25.4 8.7 8 460-467 88-95 (107)
362 2fp8_A Strictosidine synthase; 67.9 72 0.0025 29.0 19.5 246 45-325 40-314 (322)
363 3i00_A HIP-I, huntingtin-inter 67.9 12 0.00043 29.0 6.0 8 438-445 48-55 (120)
364 3u06_A Protein claret segregat 67.7 14 0.00047 35.8 7.7 21 432-452 19-39 (412)
365 1nr0_A Actin interacting prote 67.4 1.1E+02 0.0038 30.9 21.7 181 110-325 171-356 (611)
366 3c3g_A Alpha/beta peptide with 67.4 9.6 0.00033 21.6 3.7 25 457-481 3-27 (33)
367 3ba0_A Macrophage metalloelast 66.5 89 0.003 29.5 15.0 155 87-275 185-355 (365)
368 1gd2_E Transcription factor PA 66.3 11 0.00037 26.1 4.8 17 461-477 50-66 (70)
369 1hxn_A Hemopexin, HPX; heme, b 66.2 58 0.002 28.3 10.8 104 91-220 27-144 (219)
370 1kd8_A GABH AIV, GCN4 acid bas 66.1 6.5 0.00022 22.8 3.0 21 458-478 5-25 (36)
371 3b7f_A Glycosyl hydrolase, BNR 66.0 90 0.0031 29.5 19.9 197 111-331 33-269 (394)
372 1wle_A Seryl-tRNA synthetase; 66.0 23 0.0008 35.2 9.2 16 462-477 131-146 (501)
373 3m48_A General control protein 65.9 10 0.00034 21.6 3.6 25 458-482 4-28 (33)
374 1z68_A Fibroblast activation p 65.9 73 0.0025 32.9 13.8 115 160-277 224-353 (719)
375 1d7m_A Cortexillin I; coiled-c 65.7 34 0.0012 24.5 10.6 8 411-418 34-41 (101)
376 2wvr_A Geminin; DNA replicatio 65.6 30 0.001 29.1 8.2 11 403-413 116-126 (209)
377 2ic9_A Nucleocapsid protein; h 65.0 38 0.0013 24.8 8.8 13 458-470 56-68 (96)
378 2bni_A General control protein 64.9 8 0.00027 22.1 3.1 25 457-481 4-28 (34)
379 1k32_A Tricorn protease; prote 64.8 1.6E+02 0.0056 32.0 25.4 193 45-277 33-242 (1045)
380 1l8d_A DNA double-strand break 64.1 45 0.0015 25.3 11.5 7 467-473 84-90 (112)
381 1su3_A Interstitial collagenas 63.9 1.1E+02 0.0038 29.8 19.5 154 87-275 267-437 (450)
382 3frx_A Guanine nucleotide-bind 63.8 86 0.0029 28.4 19.4 145 143-325 76-228 (319)
383 3k6s_A Integrin alpha-X; cell 63.7 1.7E+02 0.0059 32.3 16.4 191 134-327 334-545 (1095)
384 3ghg_B Fibrinogen beta chain; 63.7 59 0.002 31.5 11.0 11 383-393 97-107 (461)
385 3a2a_A Voltage-gated hydrogen 63.7 11 0.00038 24.2 4.0 25 462-486 26-50 (58)
386 3m9b_A Proteasome-associated A 63.4 9.4 0.00032 33.7 5.0 29 425-453 56-84 (251)
387 3ni0_A Bone marrow stromal ant 63.2 41 0.0014 24.5 10.9 13 458-470 71-83 (99)
388 1wlq_A Geminin; coiled-coil; 2 63.1 38 0.0013 24.1 7.6 6 405-410 41-46 (83)
389 2ymu_A WD-40 repeat protein; u 63.0 1.2E+02 0.0042 29.9 22.6 180 92-323 314-497 (577)
390 1npe_A Nidogen, entactin; glyc 62.9 79 0.0027 27.7 24.2 156 86-275 82-243 (267)
391 3t97_C Nuclear pore glycoprote 62.9 10 0.00035 25.8 4.1 40 430-469 12-51 (64)
392 2wq1_A General control protein 62.8 13 0.00045 21.0 3.7 25 457-481 3-27 (33)
393 2hy6_A General control protein 61.9 9.8 0.00034 21.7 3.1 25 457-481 4-28 (34)
394 2ic6_A Nucleocapsid protein; h 61.8 39 0.0013 23.8 8.7 10 459-468 57-66 (78)
395 4dci_A Uncharacterized protein 61.2 64 0.0022 26.1 9.7 14 458-471 88-101 (150)
396 1s1c_X RHO-associated, coiled- 60.8 38 0.0013 23.4 6.9 27 407-433 4-30 (71)
397 1jof_A Carboxy-CIS,CIS-muconat 60.8 1.1E+02 0.0036 28.4 13.0 16 45-60 167-183 (365)
398 3k6s_A Integrin alpha-X; cell 60.6 2E+02 0.007 31.7 20.1 185 84-273 335-545 (1095)
399 1hjb_A Ccaat/enhancer binding 60.6 19 0.00063 26.2 5.4 45 412-456 32-76 (87)
400 4fi5_A Nucleoprotein; structur 59.9 46 0.0016 25.0 7.5 17 455-471 70-86 (113)
401 3u0c_A Invasin IPAB, 62 kDa an 59.8 69 0.0023 26.0 9.0 43 415-457 102-144 (201)
402 1uo4_A General control protein 59.3 15 0.00052 21.0 3.6 26 457-482 4-29 (34)
403 3ghg_C Fibrinogen gamma chain; 59.1 52 0.0018 31.5 9.8 29 386-414 36-64 (411)
404 2ic9_A Nucleocapsid protein; h 59.1 50 0.0017 24.2 7.5 14 440-453 55-68 (96)
405 1wle_A Seryl-tRNA synthetase; 59.0 97 0.0033 30.7 12.2 8 445-452 124-131 (501)
406 4dk0_A Putative MACA; alpha-ha 58.9 25 0.00085 33.3 7.9 19 459-477 134-152 (369)
407 2wt7_B Transcription factor MA 58.4 51 0.0017 24.0 7.3 11 383-393 23-33 (90)
408 2r2v_A GCN4 leucine zipper; co 57.8 18 0.00061 20.7 3.7 24 457-480 4-27 (34)
409 1deb_A APC protein, adenomatou 57.6 33 0.0011 21.6 5.9 28 410-437 11-38 (54)
410 3qne_A Seryl-tRNA synthetase, 56.3 23 0.00078 35.0 7.0 12 442-453 76-87 (485)
411 2aze_B Transcription factor E2 56.3 15 0.00052 27.8 4.5 32 425-456 8-39 (106)
412 1xaw_A Occludin; coiled-coil, 56.0 75 0.0026 25.2 9.0 39 390-428 47-85 (140)
413 3onj_A T-snare VTI1; helix, HA 55.7 60 0.002 24.0 11.3 75 405-481 15-93 (97)
414 1lrz_A FEMA, factor essential 55.3 32 0.0011 33.4 8.0 14 462-475 282-295 (426)
415 2j5u_A MREC protein; bacterial 54.9 10 0.00035 34.1 4.0 34 436-469 25-58 (255)
416 1gd2_E Transcription factor PA 54.8 32 0.0011 23.8 5.5 20 426-445 46-65 (70)
417 3hrp_A Uncharacterized protein 54.8 1.5E+02 0.005 28.3 28.9 202 31-277 143-361 (409)
418 3b7f_A Glycosyl hydrolase, BNR 54.6 1.4E+02 0.0049 28.0 23.0 163 92-277 128-329 (394)
419 4fla_A Regulation of nuclear P 54.2 86 0.0029 25.4 10.7 22 442-463 119-140 (152)
420 3uux_B Mitochondrial division 54.1 84 0.0029 27.4 9.3 14 440-453 201-214 (242)
421 3sja_C Golgi to ER traffic pro 53.9 25 0.00087 23.8 4.7 20 458-477 36-55 (65)
422 1gk4_A Vimentin; intermediate 53.6 59 0.002 23.3 8.7 57 424-480 2-59 (84)
423 1cii_A Colicin IA; bacteriocin 53.5 1.6E+02 0.0055 28.3 12.0 61 397-457 358-418 (602)
424 3c7x_A Matrix metalloproteinas 53.5 1E+02 0.0035 26.1 10.7 150 139-325 11-176 (196)
425 2zdi_C Prefoldin subunit alpha 53.1 85 0.0029 25.3 9.0 26 458-483 116-141 (151)
426 2p4o_A Hypothetical protein; p 52.4 1.3E+02 0.0045 27.0 21.3 214 45-306 53-275 (306)
427 4hvt_A Ritya.17583.B, post-pro 52.1 1.6E+02 0.0054 30.8 13.1 161 41-235 265-444 (711)
428 2xe4_A Oligopeptidase B; hydro 52.0 1.1E+02 0.0037 32.1 12.2 146 44-226 294-464 (751)
429 3vmx_A Voltage-gated hydrogen 52.0 41 0.0014 21.1 6.3 41 422-462 3-43 (48)
430 2w6a_A ARF GTPase-activating p 51.9 47 0.0016 21.7 6.2 47 423-469 13-63 (63)
431 3iyk_A VP5; icosahedral virus; 51.8 1.7E+02 0.0059 28.4 11.9 111 377-487 100-215 (526)
432 3s9g_A Protein hexim1; cyclin 51.5 69 0.0023 23.5 7.3 57 384-440 33-89 (104)
433 3vp9_A General transcriptional 51.4 68 0.0023 23.4 7.6 73 406-478 11-85 (92)
434 3s4r_A Vimentin; alpha-helix, 51.3 70 0.0024 23.5 8.0 59 423-481 9-76 (93)
435 3gp4_A Transcriptional regulat 51.2 91 0.0031 24.8 9.3 68 404-471 62-129 (142)
436 3vu4_A KMHSV2; beta-propeller 51.0 1.5E+02 0.0051 27.3 20.9 179 92-326 30-229 (355)
437 3sjl_D Methylamine dehydrogena 51.0 61 0.0021 31.0 9.0 107 107-222 245-365 (386)
438 1ck7_A Protein (gelatinase A); 50.8 1.3E+02 0.0043 30.9 11.7 156 87-272 448-617 (631)
439 1ykh_B RNA polymerase II holoe 50.8 89 0.0031 24.6 8.4 78 405-482 53-131 (132)
440 1itv_A MMP9; adaptive molecula 50.7 1.1E+02 0.0039 25.8 10.6 111 138-272 11-129 (195)
441 3swy_A Cyclic nucleotide-gated 50.7 43 0.0015 20.9 6.3 44 434-477 2-46 (46)
442 1nkp_B MAX protein, MYC proto- 50.6 38 0.0013 24.1 5.8 46 445-490 38-83 (83)
443 1n7d_A LDL receptor, low-densi 50.6 2.3E+02 0.008 29.3 17.8 235 6-288 389-632 (699)
444 2dq3_A Seryl-tRNA synthetase; 50.4 21 0.0007 34.8 5.7 71 382-456 31-101 (425)
445 1tu3_F RAB GTPase binding effe 50.0 23 0.00079 24.4 4.1 56 430-485 5-60 (79)
446 3lss_A Seryl-tRNA synthetase; 49.9 58 0.002 32.1 8.8 75 382-456 38-137 (484)
447 1fzc_C Fibrin; blood coagulati 49.9 13 0.00045 34.4 3.9 50 406-455 1-50 (319)
448 4f61_I Stathmin-like domain R4 49.8 1.3E+02 0.0045 26.2 10.9 129 349-477 17-167 (240)
449 3hx6_A Type 4 fimbrial biogene 49.0 2.2E+02 0.0076 28.6 14.0 124 197-327 152-287 (570)
450 3sjb_C Golgi to ER traffic pro 48.9 29 0.00098 25.4 4.7 47 437-483 23-78 (93)
451 3hhm_B NISH2 P85alpha; PI3KCA, 48.5 1.8E+02 0.0062 27.5 13.8 100 384-483 143-258 (373)
452 1hjb_A Ccaat/enhancer binding 48.4 75 0.0025 23.0 8.4 63 408-470 14-76 (87)
453 1fxk_C Protein (prefoldin); ar 47.6 99 0.0034 24.2 11.1 85 396-483 2-131 (133)
454 2aze_A Transcription factor DP 47.6 66 0.0023 26.0 7.1 46 430-475 5-50 (155)
455 1nlw_A MAD protein, MAX dimeri 47.5 35 0.0012 24.3 5.0 42 445-486 38-79 (80)
456 2xnx_M M protein, M1-BC1; cell 47.5 1E+02 0.0036 24.4 8.6 97 381-477 19-138 (146)
457 3fpp_A Macrolide-specific effl 47.4 31 0.0011 32.2 6.4 91 391-481 65-155 (341)
458 3nr7_A DNA-binding protein H-N 47.0 48 0.0016 24.0 5.7 45 404-448 26-70 (86)
459 3trt_A Vimentin; cytoskeleton, 47.0 70 0.0024 22.3 8.9 67 384-450 9-76 (77)
460 3lss_A Seryl-tRNA synthetase; 46.9 97 0.0033 30.5 9.8 104 377-480 4-137 (484)
461 3uux_B Mitochondrial division 46.9 1.3E+02 0.0043 26.3 9.2 66 418-483 151-220 (242)
462 2b5u_A Colicin E3; high resolu 46.7 1.6E+02 0.0054 28.7 10.7 81 384-469 294-374 (551)
463 1gu4_A CAAT/enhancer binding p 46.7 63 0.0021 22.8 6.2 56 387-442 21-76 (78)
464 1jof_A Carboxy-CIS,CIS-muconat 46.7 1.8E+02 0.0061 26.8 19.7 257 31-323 3-290 (365)
465 2f1m_A Acriflavine resistance 46.6 47 0.0016 29.8 7.3 79 403-481 54-132 (277)
466 1nkp_A C-MYC, MYC proto-oncoge 46.5 80 0.0027 22.8 7.9 68 423-490 2-88 (88)
467 3mov_A Lamin-B1; LMNB1, B-type 46.4 86 0.0029 23.1 8.0 75 394-468 11-86 (95)
468 3he5_B Synzip2; heterodimeric 46.4 46 0.0016 20.0 4.9 49 403-451 4-52 (52)
469 1a93_B MAX protein, coiled coi 46.2 20 0.0007 20.7 2.8 30 414-443 5-34 (34)
470 3dw8_B Serine/threonine-protei 46.2 1.9E+02 0.0066 27.1 13.8 145 92-271 237-447 (447)
471 2w6b_A RHO guanine nucleotide 46.1 57 0.002 21.0 5.7 37 434-470 14-50 (56)
472 2efk_A CDC42-interacting prote 45.8 1.7E+02 0.0058 26.3 13.0 99 379-477 100-221 (301)
473 2yko_A LINE-1 ORF1P; RNA-bindi 45.7 28 0.00095 30.4 5.0 51 404-454 1-51 (233)
474 2ke4_A CDC42-interacting prote 45.7 90 0.0031 23.1 8.9 76 400-475 13-90 (98)
475 3ajw_A Flagellar FLIJ protein; 45.6 1.1E+02 0.0038 24.2 10.0 70 409-478 67-136 (150)
476 1cii_A Colicin IA; bacteriocin 45.2 2.2E+02 0.0075 27.4 11.3 81 388-468 349-429 (602)
477 2qag_B Septin-6, protein NEDD5 45.1 4.5 0.00015 39.4 0.0 83 404-486 321-409 (427)
478 4dnd_A Syntaxin-10, SYN10; str 44.9 1.1E+02 0.0038 24.0 8.4 94 377-470 34-128 (130)
479 2xv5_A Lamin-A/C; structural p 44.9 77 0.0026 22.1 7.2 55 407-471 3-57 (74)
480 2p22_C Protein SRN2; endosome, 44.7 1.4E+02 0.0049 25.2 9.9 78 395-473 41-119 (192)
481 3a5t_A Transcription factor MA 44.7 8.7 0.0003 29.1 1.5 65 380-444 30-100 (107)
482 3viq_A SWI5-dependent recombin 44.6 1.1E+02 0.0037 23.8 7.8 62 433-494 3-76 (122)
483 2ve7_C Kinetochore protein NUF 44.5 16 0.00056 32.5 3.6 53 436-488 137-189 (250)
484 1jnm_A Proto-oncogene C-JUN; B 44.4 19 0.00065 24.2 3.1 44 412-455 18-61 (62)
485 2oqq_A Transcription factor HY 44.2 51 0.0018 19.9 5.2 37 418-454 5-41 (42)
486 1lwu_B Fibrinogen beta chain; 43.9 21 0.00073 33.1 4.4 49 407-455 7-60 (323)
487 1gmj_A ATPase inhibitor; coile 43.9 86 0.0029 22.4 7.8 54 388-451 26-79 (84)
488 3aco_A Pacsin2, protein kinase 43.4 2E+02 0.0069 26.7 11.4 95 388-482 136-245 (350)
489 1lrz_A FEMA, factor essential 43.4 33 0.0011 33.3 6.0 68 428-497 245-315 (426)
490 1zxa_A CGMP-dependent protein 43.3 21 0.00072 24.4 3.1 41 404-444 13-53 (67)
491 2dgc_A Protein (GCN4); basic d 43.1 54 0.0019 22.0 5.2 48 387-434 15-62 (63)
492 3fx0_A NF-kappa-B essential mo 43.1 35 0.0012 24.9 4.4 80 407-486 8-87 (96)
493 1ses_A Seryl-tRNA synthetase; 43.0 97 0.0033 30.0 9.1 96 381-480 2-97 (421)
494 1joc_A EEA1, early endosomal a 42.9 70 0.0024 24.9 6.7 58 387-444 3-60 (125)
495 2ic6_A Nucleocapsid protein; h 42.9 85 0.0029 22.1 7.5 55 431-485 6-76 (78)
496 2yko_A LINE-1 ORF1P; RNA-bindi 42.8 55 0.0019 28.5 6.4 48 432-479 1-48 (233)
497 2q6q_A Spindle POLE BODY compo 42.5 76 0.0026 21.4 7.2 57 402-458 3-59 (74)
498 3c75_H MADH, methylamine dehyd 42.4 2.4E+02 0.0082 27.1 18.8 224 92-326 84-361 (426)
499 2pms_C Pneumococcal surface pr 42.3 78 0.0027 24.5 6.5 77 405-481 2-88 (125)
500 1nlw_A MAD protein, MAX dimeri 42.2 48 0.0016 23.5 5.1 39 418-456 42-80 (80)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=346.59 Aligned_cols=277 Identities=14% Similarity=0.258 Sum_probs=239.6
Q ss_pred ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCc
Q 010847 30 KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 30 ~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~ 109 (499)
+.||+|||... ++++++||+.+++|..++.+ |.+|.+|++++++++||++||.. ....+
T Consensus 12 ~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~--~~~~~ 70 (306)
T 3ii7_A 12 DYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCP----------------FEKRRDAACVFWDNVVYILGGSQ--LFPIK 70 (306)
T ss_dssp CEEEEEECCSS---TTSEEEEETTTTEEEECCCC----------------SCCCBSCEEEEETTEEEEECCBS--SSBCC
T ss_pred ceEEEEeCCCC---CceEEEecCCCCCEecCCCC----------------CcccceeEEEEECCEEEEEeCCC--CCCcc
Confidence 38999999755 78999999999999999766 45899999999999999999987 33478
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccce
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHS 189 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~ 189 (499)
++++||+.+++|+.++ ++|.+|.+|++++++++||++||.+......+++++||+.+++|+.+. .+|.+|..|+
T Consensus 71 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~ 144 (306)
T 3ii7_A 71 RMDCYNVVKDSWYSKL---GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHG 144 (306)
T ss_dssp EEEEEETTTTEEEEEE---CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCE
T ss_pred eEEEEeCCCCeEEECC---CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeE
Confidence 8999999999999997 899999999999999999999999755557899999999999999985 5788999999
Q ss_pred EEEEcCcEEEEEcCCCCCCC----CCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEE
Q 010847 190 AALHANRYLIVFGGCSHSIF----FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIV 265 (499)
Q Consensus 190 ~~~~~~~~l~v~GG~~~~~~----~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 265 (499)
++.+ +++||+|||...... ++++++||+.+++|+.+ .++|.+|..|+++.++++|||+||.+.....+++++
T Consensus 145 ~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 220 (306)
T 3ii7_A 145 MVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEY 220 (306)
T ss_dssp EEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEE
T ss_pred EEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEE
Confidence 9988 556999999876655 89999999999999998 578999999999999999999999877766789999
Q ss_pred EECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC-CCceEEEEECCCCCCCCCcccCCchhhhhhhh
Q 010847 266 LNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQSPAAAAAAAS 344 (499)
Q Consensus 266 ~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 344 (499)
||+.+++|+.++.+| .++.+++++ +++ +.|||+||.++. ..+++++||+..++|..++.++.++..++++.
T Consensus 221 yd~~~~~W~~~~~~p----~~r~~~~~~--~~~--~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 292 (306)
T 3ii7_A 221 YDIKLNEWKMVSPMP----WKGVTVKCA--AVG--SIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLIC 292 (306)
T ss_dssp EETTTTEEEECCCCS----CCBSCCEEE--EET--TEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEE
T ss_pred eeCCCCcEEECCCCC----CCccceeEE--EEC--CEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEE
Confidence 999999999997654 345555443 333 479999998754 67899999999999999998888877665554
Q ss_pred h
Q 010847 345 V 345 (499)
Q Consensus 345 ~ 345 (499)
+
T Consensus 293 ~ 293 (306)
T 3ii7_A 293 V 293 (306)
T ss_dssp E
T ss_pred E
Confidence 4
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.3e-44 Score=348.17 Aligned_cols=277 Identities=20% Similarity=0.281 Sum_probs=239.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccC---CCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY---KKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~---~~~~~ 107 (499)
+||+|||. ....++++++||+.+++|..++.+ |.+|.+|++++++++||++||.. .....
T Consensus 26 ~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 26 LIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADL----------------QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp CEEEECCB-SSSBCCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred EEEEEeCc-CCCCcceEEEEcCCCCeEeECCCC----------------CcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 89999998 566789999999999999999765 56899999999999999999983 22223
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
.+++++||+.+++|+.++ ++|.+|.+|++++++++||++||.+... ..+++++||+.+++|+.+. .+|.+|..
T Consensus 89 ~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~---~~p~~r~~ 161 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVA---PMLTRRIG 161 (308)
T ss_dssp CCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECC---CCSSCCBS
T ss_pred cceEEEECCCCCeEeECC---CCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECC---CCCccccc
Confidence 678999999999999997 8999999999999999999999987644 5789999999999999986 57889999
Q ss_pred ceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEE
Q 010847 188 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 267 (499)
Q Consensus 188 ~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d 267 (499)
|+++.+ ++.||+|||.+....++++++||+.+++|+.+ .++|.+|..|+++.++++|||+||.+.....+++++||
T Consensus 162 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 162 VGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI---TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp CEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE
T ss_pred eEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC---CCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEe
Confidence 999998 55699999998777799999999999999997 56899999999999999999999988776688999999
Q ss_pred CCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC-CCceEEEEECCCCCCCCCcccCCchhhhhhh
Q 010847 268 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQSPAAAAAAA 343 (499)
Q Consensus 268 ~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 343 (499)
+.+++|+.++.++ .+|.+++++ +++ +.|||+||.++. ..+++++||+..++|...+.+|.++..++++
T Consensus 238 ~~~~~W~~~~~~p----~~r~~~~~~--~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 306 (308)
T 1zgk_A 238 VETETWTFVAPMK----HRRSALGIT--VHQ--GRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 306 (308)
T ss_dssp TTTTEEEECCCCS----SCCBSCEEE--EET--TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE
T ss_pred CCCCcEEECCCCC----CCccceEEE--EEC--CEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeE
Confidence 9999999987553 345555433 343 479999998754 5789999999999999999998888766554
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=340.26 Aligned_cols=285 Identities=19% Similarity=0.278 Sum_probs=241.0
Q ss_pred CCCcccc---eEEEEcC-CCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEc
Q 010847 24 RPSPRYK---KLYIVGG-SRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILG 99 (499)
Q Consensus 24 ~p~~r~~---~l~~~GG-~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~G 99 (499)
.+.||.. .||++|| ..+...++++++||+.+++|..++.+ |.+|.+|+++.++++||++|
T Consensus 6 ~~~pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~l~v~G 69 (301)
T 2vpj_A 6 RTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSI----------------TRKRRYVASVSLHDRIYVIG 69 (301)
T ss_dssp -------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCC----------------SSCCBSCEEEEETTEEEEEC
T ss_pred cccccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCC----------------ChhhccccEEEECCEEEEEc
Confidence 3455554 9999999 66677889999999999999998865 45899999999999999999
Q ss_pred ccCCCCCCCceEEEEECCCCc---EEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEee
Q 010847 100 GHYKKSSDSMIVRFIDLETNL---CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE 176 (499)
Q Consensus 100 G~~~~~~~~~~~~~yd~~t~~---W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 176 (499)
|..... ..+++++||+.+++ |+.++ ++|.+|.+|++++++++||++||..... ..+++++||+.+++|+.+.
T Consensus 70 G~~~~~-~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~ 144 (301)
T 2vpj_A 70 GYDGRS-RLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLG 144 (301)
T ss_dssp CBCSSC-BCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEE
T ss_pred CCCCCc-cCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECC
Confidence 987543 37789999999999 99997 8999999999999999999999988654 4889999999999999997
Q ss_pred ecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCC
Q 010847 177 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN 256 (499)
Q Consensus 177 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 256 (499)
+ +|.+|..|+++.+ +++||++||.+....++++++||+.+++|+.+ +++|.+|..|+++.++++|||+||.+.
T Consensus 145 ~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 145 D---MQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp E---CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred C---CCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEECCEEEEEeCCCC
Confidence 4 6789999999998 55699999998777899999999999999998 578999999999999999999999887
Q ss_pred CCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC-CCceEEEEECCCCCCCCCcccCC
Q 010847 257 NNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPKIFQS 335 (499)
Q Consensus 257 ~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~W~~~~~~~~ 335 (499)
....+++++||+.+++|+.++.+| .++.++++ ++++ +.||++||.++. ..+++++||+..++|..++.+|.
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p----~~r~~~~~--~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 289 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMT----TPRCYVGA--TVLR--GRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGT 289 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCS----SCCBSCEE--EEET--TEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEE
T ss_pred CcccceEEEEeCCCCcEEECCCCC----CcccceeE--EEEC--CEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCc
Confidence 666889999999999999997653 34555543 3344 469999998754 45789999999999999988888
Q ss_pred chhhhhhhh
Q 010847 336 PAAAAAAAS 344 (499)
Q Consensus 336 ~~~~~~~~~ 344 (499)
++..++++.
T Consensus 290 ~r~~~~~~~ 298 (301)
T 2vpj_A 290 QRCDAGVCV 298 (301)
T ss_dssp EEESCEEEE
T ss_pred ccccceEEE
Confidence 877665544
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.8e-43 Score=337.92 Aligned_cols=278 Identities=18% Similarity=0.247 Sum_probs=237.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||++||... ..++++++||+.+++|..++.+ |.+|.+|+++.++++||++||...... .++
T Consensus 17 ~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~----------------p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~ 78 (302)
T 2xn4_A 17 LMVVVGGQAP-KAIRSVECYDFKEERWHQVAEL----------------PSRRCRAGMVYMAGLVFAVGGFNGSLR-VRT 78 (302)
T ss_dssp EEEEECCBSS-SBCCCEEEEETTTTEEEEECCC----------------SSCCBSCEEEEETTEEEEESCBCSSSB-CCC
T ss_pred EEEEECCCCC-CCCCcEEEEcCcCCcEeEcccC----------------CcccccceEEEECCEEEEEeCcCCCcc-ccc
Confidence 8999999764 4678999999999999999765 458999999999999999999876543 678
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceE
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSA 190 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 190 (499)
+++||+.+++|+.++ ++|.+|.+|++++++++||++||.+... ..+++++||+.+++|+.+. .+|.+|..|++
T Consensus 79 ~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~ 151 (302)
T 2xn4_A 79 VDSYDPVKDQWTSVA---NMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVA---PMNTRRSSVGV 151 (302)
T ss_dssp EEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEEC---CCSSCCBSCEE
T ss_pred eEEECCCCCceeeCC---CCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecC---CCCCcccCceE
Confidence 999999999999998 8999999999999999999999987654 5789999999999999986 57889999999
Q ss_pred EEEcCcEEEEEcCCCCC--CCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEEC
Q 010847 191 ALHANRYLIVFGGCSHS--IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNM 268 (499)
Q Consensus 191 ~~~~~~~l~v~GG~~~~--~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~ 268 (499)
+.+ +++||+|||.+.. ..++++++||+.+++|+.+ .++|.+|..|+++.++++|||+||.+.....+++++||+
T Consensus 152 ~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 152 GVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp EEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEET
T ss_pred EEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---CCCccccccccEEEECCEEEEECCCCCCcccceEEEEeC
Confidence 998 4569999998654 3588999999999999998 578999999999999999999999877666789999999
Q ss_pred CCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC-CCceEEEEECCCCCCCCCc-ccCCchhhhhhhhh
Q 010847 269 TKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK-YNNEVFVMRLKPRDIPRPK-IFQSPAAAAAAASV 345 (499)
Q Consensus 269 ~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~~~~~~W~~~~-~~~~~~~~~~~~~~ 345 (499)
.+++|+.++.++ .++.++++ +.++ +.|||+||.++. ..+++++||+..++|...+ .++.++..++++.+
T Consensus 228 ~~~~W~~~~~~~----~~r~~~~~--~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 228 TTNAWRQVADMN----MCRRNAGV--CAVN--GLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp TTTEEEEECCCS----SCCBSCEE--EEET--TEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEE
T ss_pred CCCCEeeCCCCC----CccccCeE--EEEC--CEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEe
Confidence 999999998654 34545543 3344 479999998754 4688999999999999886 67877776665544
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=328.66 Aligned_cols=258 Identities=15% Similarity=0.186 Sum_probs=228.5
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCC
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 75 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~ 75 (499)
+.|.|||.+++|..++ .+|.+|.. +||++||.. ...++++++||+.+++|+.++++
T Consensus 25 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~------------ 88 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGP------------ 88 (306)
T ss_dssp SEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECC------------
T ss_pred eEEEecCCCCCEecCC---CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCC------------
Confidence 5689999999999998 67888887 999999987 67789999999999999999876
Q ss_pred CCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCC
Q 010847 76 LLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRS 155 (499)
Q Consensus 76 ~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~ 155 (499)
|.+|.+|++++++++||++||.+......+++++||+.+++|+.++ ++|.+|.+|++++++++||++||....
T Consensus 89 ----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 89 ----PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp ----SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEESC
T ss_pred ----CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEECCCCCC
Confidence 4689999999999999999998744445788999999999999997 899999999999999999999998765
Q ss_pred CC---ccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCC
Q 010847 156 RK---LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 232 (499)
Q Consensus 156 ~~---~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 232 (499)
.. ..+++++||+.+++|+.+. .+|.+|..|+++.+ +++||++||.+....++++++||+.+++|+.+ +++
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~ 234 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV---SPM 234 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEEC---CCC
T ss_pred CCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC---CCC
Confidence 43 2889999999999999997 57889999999999 55699999988777789999999999999998 578
Q ss_pred CCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEE
Q 010847 233 VTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSA 295 (499)
Q Consensus 233 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~ 295 (499)
|.+|.+|+++.++++|||+||.+.....+++++||+.+++|+.++.++ .+|.+++++++
T Consensus 235 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~r~~~~~~~~ 293 (306)
T 3ii7_A 235 PWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR----AFPVTSCLICV 293 (306)
T ss_dssp SCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE----CCSCTTCEEEE
T ss_pred CCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc----cccceeEEEEE
Confidence 999999999999999999999887777889999999999999997764 45666765544
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=326.82 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=224.8
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCC
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 75 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~ 75 (499)
+.++|||..++|..++ .+|.+|.. +||++||..+...++++++||+.+++|+.++++
T Consensus 31 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~------------ 95 (302)
T 2xn4_A 31 SVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM------------ 95 (302)
T ss_dssp CEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC------------
T ss_pred cEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC------------
Confidence 4689999999999997 67888876 999999998777889999999999999999876
Q ss_pred CCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCC
Q 010847 76 LLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRS 155 (499)
Q Consensus 76 ~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~ 155 (499)
|.+|.+|++++++++||++||...... .+++++||+.+++|+.++ ++|.+|.+|++++++++||++||.+..
T Consensus 96 ----p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 96 ----RDRRSTLGAAVLNGLLYAVGGFDGSTG-LSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLLYAVGGYDVA 167 (302)
T ss_dssp ----SSCCBSCEEEEETTEEEEEEEECSSCE-EEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred ----CccccceEEEEECCEEEEEcCCCCCcc-CceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEEEEEeCCCCC
Confidence 458999999999999999999876543 678999999999999997 899999999999999999999998765
Q ss_pred C-CccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCC
Q 010847 156 R-KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT 234 (499)
Q Consensus 156 ~-~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~ 234 (499)
. ...+++++||+.+++|+.+. .+|.+|.+|+++.++ +.||+|||.++....+++++||+.+++|+.+ .++|.
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~~~ 240 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLN-NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV---ADMNM 240 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEET-TEEEEECCBSSSSBCCCEEEEETTTTEEEEE---CCCSS
T ss_pred CCccccEEEEEeCCCCcEEECC---CCccccccccEEEEC-CEEEEECCCCCCcccceEEEEeCCCCCEeeC---CCCCC
Confidence 3 35789999999999999996 578899999999884 5699999998777789999999999999998 57889
Q ss_pred cCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEec-cCCCCCCCCCCCCce
Q 010847 235 GRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILT-SVKGRNPLASEGLSV 292 (499)
Q Consensus 235 ~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~-~~~~~~p~~~~~~~~ 292 (499)
+|..|+++.++++|||+||.+.....+++++||+.+++|+.++ .+ |.+|.+|++
T Consensus 241 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~~r~~~~~ 295 (302)
T 2xn4_A 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCM----STGRSYAGV 295 (302)
T ss_dssp CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCC----SSCCBSCEE
T ss_pred ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCccc----CcccccceE
Confidence 9999999999999999999877666789999999999999986 33 344555543
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=334.44 Aligned_cols=273 Identities=18% Similarity=0.255 Sum_probs=226.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccC-----CCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY-----KKS 105 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~-----~~~ 105 (499)
.||++|| +++++|||.+++|.. ++++ .|.+|.+|++++++++||++||.. ...
T Consensus 6 ~l~~~GG-------~~~~~yd~~~~~W~~-~~~~--------------~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 63 (315)
T 4asc_A 6 LIFMISE-------EGAVAYDPAANECYC-ASLS--------------SQVPKNHVSLVTKENQVFVAGGLFYNEDNKED 63 (315)
T ss_dssp EEEEEET-------TEEEEEETTTTEEEE-EECC--------------CCSCSSEEEEECTTCCEEEEEEEEECSSCSSS
T ss_pred EEEEEcC-------CceEEECCCCCeEec-CCCC--------------CCCCccceEEEEECCEEEEEcCcccCCCCCcc
Confidence 6899999 579999999999987 4432 256899999999999999999963 112
Q ss_pred CCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCC--CCCccCcEEEEECCCCeeEEeeecCCCCC
Q 010847 106 SDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR--SRKLLNDVHFLDLETMTWDAVEVTQTPPA 183 (499)
Q Consensus 106 ~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~p~ 183 (499)
...+++++||+.+++|+.++ ++|.+|.+|++++++++||++||.+. .....+++++||+.+++|+.+. .+|.
T Consensus 64 ~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~ 137 (315)
T 4asc_A 64 PMSAYFLQFDHLDSEWLGMP---PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPY 137 (315)
T ss_dssp CEEEEEEEEETTTTEEEECC---CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSS
T ss_pred ccccceEEecCCCCeEEECC---CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCC
Confidence 23456999999999999997 89999999999999999999999752 3446899999999999999986 5788
Q ss_pred CCccceEEEEcCcEEEEEcCC-CCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcce
Q 010847 184 PRYDHSAALHANRYLIVFGGC-SHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~-~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 262 (499)
+|.+|+++.+++ +||+|||. .....++++++||+.+++|+.+ +++|.+|..|+++.++++|||+||.+.....++
T Consensus 138 ~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 213 (315)
T 4asc_A 138 VVYGHTVLSHMD-LVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL---APMQTARSLFGATVHDGRIIVAAGVTDTGLTSS 213 (315)
T ss_dssp CCBSCEEEEETT-EEEEECCBCTTSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEEEEECSSSEEEE
T ss_pred cccceeEEEECC-EEEEEeCCCCCCcccceEEEEeCCCCeEEEC---CCCCCchhceEEEEECCEEEEEeccCCCCccce
Confidence 999999999855 59999998 5567789999999999999997 578999999999999999999999887767889
Q ss_pred EEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCC----------CCCceEEEEECCCCCCCCCcc
Q 010847 263 TIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFVMRLKPRDIPRPKI 332 (499)
Q Consensus 263 ~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~~~~~~~~~~~W~~~~~ 332 (499)
+++||+.+++|+.++.+| .+|.+++++ +++ +.|||+||.++ ...+++++||+..++|..+
T Consensus 214 ~~~yd~~~~~W~~~~~~p----~~r~~~~~~--~~~--~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-- 283 (315)
T 4asc_A 214 AEVYSITDNKWAPFEAFP----QERSSLSLV--SLV--GTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-- 283 (315)
T ss_dssp EEEEETTTTEEEEECCCS----SCCBSCEEE--EET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--
T ss_pred EEEEECCCCeEEECCCCC----CcccceeEE--EEC--CEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--
Confidence 999999999999997653 445555443 344 37999999853 2467899999999999987
Q ss_pred cCCchhhhhhhhh
Q 010847 333 FQSPAAAAAAASV 345 (499)
Q Consensus 333 ~~~~~~~~~~~~~ 345 (499)
.+.|+..++++.+
T Consensus 284 ~~~~r~~~~~~~~ 296 (315)
T 4asc_A 284 LREIAYAAGATFL 296 (315)
T ss_dssp ESCSSCCSSCEEE
T ss_pred ccCCcCccceEEe
Confidence 5555555544443
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.6e-41 Score=328.17 Aligned_cols=255 Identities=18% Similarity=0.228 Sum_probs=225.8
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCC----CCCcccCcEEEEEcCCCceEEeeeCcccccCcc
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGS----RNGRFLSDVQVFDLRSLAWSNLRLETELDADKT 71 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~----~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 71 (499)
+.|.|||.+++|..++ .+|.+|.. +||++||. .+...++++++||+.+++|+.++++
T Consensus 40 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-------- 108 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM-------- 108 (308)
T ss_dssp CEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC--------
T ss_pred eEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC--------
Confidence 4689999999999997 67888876 99999998 5566789999999999999999876
Q ss_pred ccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcC
Q 010847 72 EDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGG 151 (499)
Q Consensus 72 ~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG 151 (499)
|.+|.+|++++++++||++||...... .+++++||+.+++|+.++ ++|.+|.+|++++++++||++||
T Consensus 109 --------p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 109 --------SVPRNRIGVGVIDGHIYAVGGSHGCIH-HNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp --------SSCCBTCEEEEETTEEEEECCEETTEE-CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECC
T ss_pred --------CcCccccEEEEECCEEEEEcCCCCCcc-cccEEEECCCCCeEeECC---CCCccccceEEEEECCEEEEEeC
Confidence 458999999999999999999876443 678999999999999997 89999999999999999999999
Q ss_pred cCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCC
Q 010847 152 EDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGD 231 (499)
Q Consensus 152 ~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~ 231 (499)
.+.... .+++++||+.+++|+.+. .+|.+|..|+++.+ ++.||||||.+....++++++||+.+++|+.+ .+
T Consensus 177 ~~~~~~-~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~~ 248 (308)
T 1zgk_A 177 FDGTNR-LNSAECYYPERNEWRMIT---AMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFV---AP 248 (308)
T ss_dssp BCSSCB-CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC---CC
T ss_pred CCCCCc-CceEEEEeCCCCeEeeCC---CCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC---CC
Confidence 886653 889999999999999986 57889999999998 55699999998777789999999999999997 57
Q ss_pred CCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceE
Q 010847 232 LVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVC 293 (499)
Q Consensus 232 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~ 293 (499)
+|.+|..|+++.++++|||+||.+.....+++++||+.+++|+.++.+| .+|.+++++
T Consensus 249 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p----~~r~~~~~~ 306 (308)
T 1zgk_A 249 MKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT----SGRSGVGVA 306 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS----SCCBSCEEE
T ss_pred CCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC----CCcccceeE
Confidence 8999999999999999999999887767889999999999999997764 456555543
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=321.94 Aligned_cols=255 Identities=19% Similarity=0.297 Sum_probs=225.9
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCCCCCcccCcEEEEEcCCCc---eEEeeeCcccccCccc
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGSRNGRFLSDVQVFDLRSLA---WSNLRLETELDADKTE 72 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~~~~~ 72 (499)
+.|.|||.+++|..++ .+|.+|.. +||++||..+...++++++||+.+++ |+.++++
T Consensus 32 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~--------- 99 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM--------- 99 (301)
T ss_dssp CEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC---------
T ss_pred EEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC---------
Confidence 4689999999999998 57778876 99999999877788999999999999 9999776
Q ss_pred cCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCc
Q 010847 73 DSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGE 152 (499)
Q Consensus 73 ~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~ 152 (499)
|.+|.+|+++.++++||++||...... .+++++||+.+++|+.++ ++|.+|.+|++++++++||++||.
T Consensus 100 -------p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 100 -------NVRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLG---DMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp -------SSCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEETTEEEEECCB
T ss_pred -------CCCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECC---CCCCCcccceEEEECCEEEEECCC
Confidence 458999999999999999999886544 788999999999999997 789999999999999999999998
Q ss_pred CCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCC
Q 010847 153 DRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 232 (499)
Q Consensus 153 ~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 232 (499)
+... ..+++++||+.+++|+.+. .+|.+|..|+++.++ ++||++||.+.....+++++||+.+++|+.+ +++
T Consensus 169 ~~~~-~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~ 240 (301)
T 2vpj_A 169 DGLN-ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLN-DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV---TSM 240 (301)
T ss_dssp CSSC-BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEET-TEEEEECCBCSSSBCCCEEEEETTTTEEEEE---CCC
T ss_pred CCCc-ccceEEEEeCCCCcEEeCC---CCCcccccceEEEEC-CEEEEEeCCCCCcccceEEEEeCCCCcEEEC---CCC
Confidence 7654 5899999999999999996 578899999999984 5699999998777789999999999999998 578
Q ss_pred CCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceE
Q 010847 233 VTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVC 293 (499)
Q Consensus 233 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~ 293 (499)
|.+|..|+++.++++|||+||.+.....+++++||+.+++|+.++.++ .+|.+++++
T Consensus 241 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~~~~~ 297 (301)
T 2vpj_A 241 TTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG----TQRCDAGVC 297 (301)
T ss_dssp SSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE----EEEESCEEE
T ss_pred CCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC----cccccceEE
Confidence 999999999999999999999877766789999999999999997764 345555443
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=329.68 Aligned_cols=267 Identities=15% Similarity=0.198 Sum_probs=223.1
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCCC------CCcccCcEEEEEcCCCceEEeeeCcccccC
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGSR------NGRFLSDVQVFDLRSLAWSNLRLETELDAD 69 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~~------~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 69 (499)
+.|+|||.+++|...+. +.|.+|.+ +||++||.. .....+++++||+.+++|+.++++
T Consensus 14 ~~~~yd~~~~~W~~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~------ 85 (315)
T 4asc_A 14 GAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL------ 85 (315)
T ss_dssp EEEEEETTTTEEEEEEC--CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB------
T ss_pred ceEEECCCCCeEecCCC--CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC------
Confidence 46899999999997432 33667776 999999962 123345699999999999998776
Q ss_pred ccccCCCCCCCCCccceeEEEECCEEEEEcccCC--CCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEE
Q 010847 70 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK--KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLI 147 (499)
Q Consensus 70 ~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~ly 147 (499)
|.+|.+|++++++++||++||... .....+++++||+.+++|+.++ ++|.+|.+|++++++++||
T Consensus 86 ----------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iy 152 (315)
T 4asc_A 86 ----------PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMDLVY 152 (315)
T ss_dssp ----------SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEE
T ss_pred ----------CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECCEEE
Confidence 468999999999999999999753 2335788999999999999997 8999999999999999999
Q ss_pred EEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecc
Q 010847 148 IFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 227 (499)
Q Consensus 148 v~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 227 (499)
++||.+......+++++||+.+++|+.+. .+|.+|..|+++.++ ++|||+||.+....++++++||+.+++|+.+
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~- 227 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHD-GRIIVAAGVTDTGLTSSAEVYSITDNKWAPF- 227 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEET-TEEEEEEEECSSSEEEEEEEEETTTTEEEEE-
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECC---CCCCchhceEEEEEC-CEEEEEeccCCCCccceEEEEECCCCeEEEC-
Confidence 99999666667899999999999999987 578899999999984 4699999998777889999999999999998
Q ss_pred cCCCCCCcCcccEEEEECCEEEEEeCCCCC---------CCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc
Q 010847 228 IKGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE 298 (499)
Q Consensus 228 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~ 298 (499)
.++|.+|..|+++.++++|||+||.+.. ...+++++||+.+++|+.+. |.+|.+++++++
T Consensus 228 --~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------~~~r~~~~~~~~--- 296 (315)
T 4asc_A 228 --EAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------REIAYAAGATFL--- 296 (315)
T ss_dssp --CCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE------SCSSCCSSCEEE---
T ss_pred --CCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc------cCCcCccceEEe---
Confidence 5689999999999999999999997531 23578999999999999983 334666665443
Q ss_pred CceEEEEEcC
Q 010847 299 GEHHLVAFGG 308 (499)
Q Consensus 299 ~~~~l~v~GG 308 (499)
++.|+++..
T Consensus 297 -~~~l~v~~~ 305 (315)
T 4asc_A 297 -PVRLNVLRL 305 (315)
T ss_dssp -EEEECGGGS
T ss_pred -CCEEEEEEe
Confidence 345776654
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=9.3e-41 Score=324.33 Aligned_cols=273 Identities=16% Similarity=0.248 Sum_probs=225.3
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCC-----
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS----- 105 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~----- 105 (499)
.||++||. ++++|||.+++|...+ ++ .|.+|.+|+++.++++||++||.....
T Consensus 17 ~i~~~GG~-------~~~~yd~~~~~W~~~~-~~--------------~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 74 (318)
T 2woz_A 17 LILLVNDT-------AAVAYDPMENECYLTA-LA--------------EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQ 74 (318)
T ss_dssp EEEEECSS-------EEEEEETTTTEEEEEE-EC--------------TTSCSSEEEEECSSSCEEEEESSCC-------
T ss_pred hhhhcccc-------ceEEECCCCCceeccc-CC--------------ccCCccceEEEEECCEEEEECCcccCccccCC
Confidence 89999994 4899999999999843 22 246899999999999999999964211
Q ss_pred CCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCC-CCCccCcEEEEECCCCeeEEeeecCCCCCC
Q 010847 106 SDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDR-SRKLLNDVHFLDLETMTWDAVEVTQTPPAP 184 (499)
Q Consensus 106 ~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~ 184 (499)
...+++++||+.+++|..++ ++|.+|.+|++++++++||++||... .....+++++||+.+++|+.+. .+|.+
T Consensus 75 ~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~ 148 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIK 148 (318)
T ss_dssp CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSC
T ss_pred CccccEEEEeCCCCcEEECC---CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCc
Confidence 12345999999999999997 89999999999999999999999863 3446889999999999999986 57889
Q ss_pred CccceEEEEcCcEEEEEcCCC-CCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceE
Q 010847 185 RYDHSAALHANRYLIVFGGCS-HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQET 263 (499)
Q Consensus 185 r~~~~~~~~~~~~l~v~GG~~-~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~ 263 (499)
|.+|+++.+ ++.||+|||.. ....++++++||+.+++|+.+ +++|.+|..|+++.++++|||+||.+.....+++
T Consensus 149 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 149 VYGHNVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL---APMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASV 224 (318)
T ss_dssp EESCEEEEE-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ccccEEEEE-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC---CCCCCCcccceEEEECCEEEEEcCcCCCCccceE
Confidence 999999997 55699999974 445689999999999999998 5789999999999999999999998776667899
Q ss_pred EEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCC----------CCCceEEEEECCCCCCCCCccc
Q 010847 264 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG----------KYNNEVFVMRLKPRDIPRPKIF 333 (499)
Q Consensus 264 ~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~----------~~~~~~~~~~~~~~~W~~~~~~ 333 (499)
++||+.+++|+.++.+| .+|.++++ ++.+ +.||++||.+. ...+++|+||+.+++|..+ +
T Consensus 225 ~~yd~~~~~W~~~~~~p----~~r~~~~~--~~~~--~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~ 294 (318)
T 2woz_A 225 EAFDLKTNKWEVMTEFP----QERSSISL--VSLA--GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L 294 (318)
T ss_dssp EEEETTTCCEEECCCCS----SCCBSCEE--EEET--TEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E
T ss_pred EEEECCCCeEEECCCCC----CcccceEE--EEEC--CEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c
Confidence 99999999999997654 34555543 3344 47999999864 2468999999999999987 5
Q ss_pred CCchhhhhhhhh
Q 010847 334 QSPAAAAAAASV 345 (499)
Q Consensus 334 ~~~~~~~~~~~~ 345 (499)
+.++..++.+.+
T Consensus 295 ~~~r~~~~~~~~ 306 (318)
T 2woz_A 295 KEIRYASGASCL 306 (318)
T ss_dssp SCCGGGTTCEEE
T ss_pred ccccccccceee
Confidence 666665554443
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-40 Score=322.83 Aligned_cols=266 Identities=17% Similarity=0.235 Sum_probs=221.2
Q ss_pred CCccccCCCCCeEEcccCCCCCCcccc--------eEEEEcCCCC------CcccCcEEEEEcCCCceEEeeeCcccccC
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPRYK--------KLYIVGGSRN------GRFLSDVQVFDLRSLAWSNLRLETELDAD 69 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r~~--------~l~~~GG~~~------~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 69 (499)
+.++|||.+++|...+. +.|.+|.. +||++||... ....+++++||+.+++|+.++++
T Consensus 25 ~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~------ 96 (318)
T 2woz_A 25 AAVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL------ 96 (318)
T ss_dssp EEEEEETTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB------
T ss_pred ceEEECCCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC------
Confidence 35899999999998553 33456665 9999999631 12234599999999999999776
Q ss_pred ccccCCCCCCCCCccceeEEEECCEEEEEcccCC-CCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEE
Q 010847 70 KTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK-KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLII 148 (499)
Q Consensus 70 ~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv 148 (499)
|.+|.+|++++++++||++||... .....+++++||+.+++|+.++ ++|.+|.+|++++++++||+
T Consensus 97 ----------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv 163 (318)
T 2woz_A 97 ----------PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNGMIYC 163 (318)
T ss_dssp ----------SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETTEEEE
T ss_pred ----------CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECCEEEE
Confidence 458999999999999999999863 2334688999999999999997 89999999999999999999
Q ss_pred EcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEeccc
Q 010847 149 FGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEI 228 (499)
Q Consensus 149 ~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~ 228 (499)
+||........+++++||+.+++|+.+. .+|.+|..|+++.++ +.|||+||.+....++++++||+.+++|+.+
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-- 237 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHK-GKIVIAGGVTEDGLSASVEAFDLKTNKWEVM-- 237 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEET-TEEEEEEEEETTEEEEEEEEEETTTCCEEEC--
T ss_pred EcCCCCCCCccceEEEEcCCCCEEEECC---CCCCCcccceEEEEC-CEEEEEcCcCCCCccceEEEEECCCCeEEEC--
Confidence 9998766667899999999999999996 578899999999884 5699999988777788999999999999997
Q ss_pred CCCCCCcCcccEEEEECCEEEEEeCCCCC---------CCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcC
Q 010847 229 KGDLVTGRAGHAGITIDENWYIVGGGDNN---------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG 299 (499)
Q Consensus 229 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~---------~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~ 299 (499)
+++|.+|..|+++.++++|||+||.+.. ...+++|+||+.+++|+.+ + |.++.+|+++.+
T Consensus 238 -~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~----~~~r~~~~~~~~---- 306 (318)
T 2woz_A 238 -TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L----KEIRYASGASCL---- 306 (318)
T ss_dssp -CCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E----SCCGGGTTCEEE----
T ss_pred -CCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c----ccccccccceee----
Confidence 5689999999999999999999997642 2368999999999999998 2 334556655443
Q ss_pred ceEEEEEc
Q 010847 300 EHHLVAFG 307 (499)
Q Consensus 300 ~~~l~v~G 307 (499)
.+.|||+.
T Consensus 307 ~~~iyi~~ 314 (318)
T 2woz_A 307 ATRLNLFK 314 (318)
T ss_dssp EEEEEGGG
T ss_pred CCEEEEEE
Confidence 34566653
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.8e-39 Score=317.46 Aligned_cols=277 Identities=14% Similarity=0.138 Sum_probs=211.5
Q ss_pred CCCCcccc--------eEEEEcCCCCCcccCcEEEEEcC--CCceEEeeeCcccccCccccCCCCCCCCCccceeEEEEC
Q 010847 23 ARPSPRYK--------KLYIVGGSRNGRFLSDVQVFDLR--SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG 92 (499)
Q Consensus 23 ~~p~~r~~--------~l~~~GG~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~ 92 (499)
++|.+|.. +|||+||... +++++||+. +++|+.+++++ +.+|.+|++++++
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p---------------~~~R~~~~~~~~~ 65 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFP---------------GGPRDQATSAFID 65 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCT---------------TCCCBSCEEEEET
T ss_pred CCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCC---------------CCcCccceEEEEC
Confidence 67777776 8999999753 479999998 59999998763 1589999999999
Q ss_pred CEEEEEccc-C---CCCCCCceEEEEECCCCcEEEeecCCCCC-CCCcceEEEEECCEEEEEcCcCCCC-----------
Q 010847 93 TKLLILGGH-Y---KKSSDSMIVRFIDLETNLCGVMETSGKVP-VARGGHSVTLVGSRLIIFGGEDRSR----------- 156 (499)
Q Consensus 93 ~~iyv~GG~-~---~~~~~~~~~~~yd~~t~~W~~~~~~g~~p-~~r~~~~~~~~~~~lyv~GG~~~~~----------- 156 (499)
++||++||. . ......+++++||+.+++|+.++ +++ .+|.+|++++++++||+|||.+...
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLM---SHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECS---CCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECC---CCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 999999998 2 12224678999999999999998 444 9999999999999999999986432
Q ss_pred ----------------------CccCcEEEEECCCCeeEEeeecCCCCCCCcc-ceEEEEcCcEEEEEcCCCCC-CCCCc
Q 010847 157 ----------------------KLLNDVHFLDLETMTWDAVEVTQTPPAPRYD-HSAALHANRYLIVFGGCSHS-IFFND 212 (499)
Q Consensus 157 ----------------------~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~-~~~~~ 212 (499)
...+++++||+.+++|+.+.+ +|.++.. |+++.+ ++.||||||.... ..+++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE---SPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE---CSSCCCBSCEEEEE-TTEEEEECCEEETTEECCC
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC---CCCCCcccccEEEE-CCEEEEEeeecCCCcccCc
Confidence 246899999999999999974 5655555 888887 5569999997543 45789
Q ss_pred EEEEEC--CCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCC-----------------CCcceEEEEECCCCce
Q 010847 213 LHVLDL--QTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNN-----------------NGCQETIVLNMTKLAW 273 (499)
Q Consensus 213 i~~~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-----------------~~~~~~~~~d~~~~~W 273 (499)
++.||+ .+++|+.+... +.|.+|.+|+++.++++|||+||.+.. ..++++++||+.+++|
T Consensus 219 v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W 297 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW 297 (357)
T ss_dssp EEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C
T ss_pred eEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce
Confidence 999987 89999998432 234456788899999999999996432 2246899999999999
Q ss_pred EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC--CCceEEEEECCCCCCCCCcccC
Q 010847 274 SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPRDIPRPKIFQ 334 (499)
Q Consensus 274 ~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~--~~~~~~~~~~~~~~W~~~~~~~ 334 (499)
+.++.+| .+|.++++ ++++ +.||||||.+.. ..+++++|+++.++|......|
T Consensus 298 ~~~~~~p----~~r~~~~~--~~~~--~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 298 DKSGELS----QGRAYGVS--LPWN--NSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEEECS----SCCBSSEE--EEET--TEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eeCCCCC----CCccccee--EEeC--CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 9997664 34555544 3344 479999998643 4689999999999998765543
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.2e-37 Score=329.91 Aligned_cols=278 Identities=14% Similarity=0.151 Sum_probs=224.5
Q ss_pred CCCCcccc-------eEEEEcCCCCCcccCcEEEEEcCCCceEEee-eCcccccCccccCCCCCCCCCccceeEEEE--C
Q 010847 23 ARPSPRYK-------KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLR-LETELDADKTEDSGLLEVLPPMSDHCMVKW--G 92 (499)
Q Consensus 23 ~~p~~r~~-------~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~ 92 (499)
..|.+|++ +||++||... ..++++++||+.+++|+.++ +++. +..|.+|.+|+++++ +
T Consensus 384 ~~p~rr~g~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~-----------~~~p~~R~~hs~~~~~~~ 451 (695)
T 2zwa_A 384 CPINRKFGDVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSS-----------SEVPVARMCHTFTTISRN 451 (695)
T ss_dssp CTTCCBSCEEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCC-----------SCCCCCCBSCEEEEETTT
T ss_pred CCCCCceeEEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCC-----------CCCCccccceEEEEEccC
Confidence 56667776 8999999877 77899999999999999998 5432 445789999999999 9
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
++||++||........+++++||+.+++|+.++ ++|.+|.+|+++++ +++||+|||.+... ++++||+.+++
T Consensus 452 ~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~ 524 (695)
T 2zwa_A 452 NQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEI 524 (695)
T ss_dssp TEEEEECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTE
T ss_pred CEEEEEcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCc
Confidence 999999999876645788999999999999997 89999999999997 99999999987654 89999999999
Q ss_pred eEEeeecCCCCCCCccceEEEEc-C-cEEEEEcCCCCC--CCCCcEEEEECCCCc------eEecccCCCCCCcCcccEE
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHA-N-RYLIVFGGCSHS--IFFNDLHVLDLQTNE------WSQPEIKGDLVTGRAGHAG 241 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~-~-~~l~v~GG~~~~--~~~~~i~~~d~~~~~------W~~~~~~~~~p~~r~~~~~ 241 (499)
|+.+.+.+.+|.+|.+|++++++ + ++||||||.... ..++++++||+.+++ |+.+.. .++.+|++|++
T Consensus 525 W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~ 602 (695)
T 2zwa_A 525 FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQI 602 (695)
T ss_dssp EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEE
T ss_pred eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceE
Confidence 99999887899999999987765 2 679999998543 678999999999999 787743 12588999999
Q ss_pred EEEC-CEEEEEeCCCCCC---CcceEEEEECCCCceEEeccCCCC---CCCCCCCCceEEEEEcCceEEEEEcCCC----
Q 010847 242 ITID-ENWYIVGGGDNNN---GCQETIVLNMTKLAWSILTSVKGR---NPLASEGLSVCSAIIEGEHHLVAFGGYN---- 310 (499)
Q Consensus 242 ~~~~-~~l~v~GG~~~~~---~~~~~~~~d~~~~~W~~l~~~~~~---~p~~~~~~~~~~~~~~~~~~l~v~GG~~---- 310 (499)
+.++ ++|||+||.+... ..+++++||+.+++|+.++.+... .++.+.+|+. +.+.+ ..|||+||..
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~--~~~~~-g~i~v~GGg~~cfs 679 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSL--VSTSM-GTIHIIGGGATCYG 679 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEE--ECC----CEEEECCEEECTT
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeE--EEeCC-CEEEEEeCCccCcC
Confidence 9999 9999999986553 478999999999999965432111 1124455543 33333 2688999953
Q ss_pred -CCCCceEEEEECCC
Q 010847 311 -GKYNNEVFVMRLKP 324 (499)
Q Consensus 311 -~~~~~~~~~~~~~~ 324 (499)
+...+++|.+|+..
T Consensus 680 fGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 680 FGSVTNVGLKLIAIA 694 (695)
T ss_dssp SCEEECCCEEEEECC
T ss_pred ccccccceEEEEEEc
Confidence 33456899998754
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-36 Score=300.21 Aligned_cols=251 Identities=19% Similarity=0.325 Sum_probs=201.6
Q ss_pred CCccccCC--CCCeEEcccCCCCC-Ccccc--------eEEEEcCC-C----CCcccCcEEEEEcCCCceEEeeeCcccc
Q 010847 4 GSWHLELP--YDLWVTLPVSGARP-SPRYK--------KLYIVGGS-R----NGRFLSDVQVFDLRSLAWSNLRLETELD 67 (499)
Q Consensus 4 ~~~~~~~~--~~~W~~~~~~~~~p-~~r~~--------~l~~~GG~-~----~~~~~~~~~~yd~~t~~W~~~~~~~~~~ 67 (499)
+.|+||+. +++|..++ ++| .+|.. +|||+||. . ....++++++||+.+++|+.+++++
T Consensus 32 ~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--- 105 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--- 105 (357)
T ss_dssp CEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC---
T ss_pred eEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC---
Confidence 56899997 59999998 577 78876 99999998 3 2456899999999999999998763
Q ss_pred cCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCC---------------------------------CCCceEEEE
Q 010847 68 ADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKS---------------------------------SDSMIVRFI 114 (499)
Q Consensus 68 ~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~---------------------------------~~~~~~~~y 114 (499)
|.+|.+|++++++++||++||.+... ...+++++|
T Consensus 106 ------------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 106 ------------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp ------------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred ------------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 57899999999999999999976432 135789999
Q ss_pred ECCCCcEEEeecCCCCCCCCc-ceEEEEECCEEEEEcCcCCCCCccCcEEEEEC--CCCeeEEeeecCCCCCCCccceEE
Q 010847 115 DLETNLCGVMETSGKVPVARG-GHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPAPRYDHSAA 191 (499)
Q Consensus 115 d~~t~~W~~~~~~g~~p~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~p~~r~~~~~~ 191 (499)
|+.+++|+.+. ++|.++. ++++++++++||+|||.+......+++++||+ .+++|+.+..+ ..|.+|.+|+++
T Consensus 174 d~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~ 249 (357)
T 2uvk_A 174 DPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAG 249 (357)
T ss_dssp ETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEEE
T ss_pred eCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceEE
Confidence 99999999997 7786654 49999999999999998765556889999987 89999999764 334456688888
Q ss_pred EEcCcEEEEEcCCCC-----------------CCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCC
Q 010847 192 LHANRYLIVFGGCSH-----------------SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGG 254 (499)
Q Consensus 192 ~~~~~~l~v~GG~~~-----------------~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 254 (499)
.++ +.||||||.+. ...++++++||+.+++|+.+ +++|.+|..|+++.++++|||+||.
T Consensus 250 ~~~-~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 250 ISN-DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp EET-TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCCBSSEEEEETTEEEEEEEE
T ss_pred EEC-CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCcccceeEEeCCEEEEEeee
Confidence 885 46999999642 22346899999999999997 5688999999999999999999998
Q ss_pred CCCCC-cceEEEEECCCCceEEeccCC
Q 010847 255 DNNNG-CQETIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 255 ~~~~~-~~~~~~~d~~~~~W~~l~~~~ 280 (499)
+.... ++++++|++.+++|..+...+
T Consensus 326 ~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred CCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 76544 689999999999999986654
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=8.5e-34 Score=302.22 Aligned_cols=236 Identities=17% Similarity=0.289 Sum_probs=195.9
Q ss_pred CCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEee-c--CCCCCCCCcceEEEEE--CCEEEEEcCcCC
Q 010847 80 LPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVME-T--SGKVPVARGGHSVTLV--GSRLIIFGGEDR 154 (499)
Q Consensus 80 p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~--~g~~p~~r~~~~~~~~--~~~lyv~GG~~~ 154 (499)
|+.|.+|+ ++++++||++||... ...+++++||+.+++|+.++ + .+.+|.+|.+|+++++ +++||+|||.+.
T Consensus 386 p~rr~g~~-~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 386 INRKFGDV-DVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp TCCBSCEE-EECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred CCCceeEE-EEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC
Confidence 45566655 448999999999876 34788999999999999998 3 3569999999999999 999999999987
Q ss_pred CCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCC
Q 010847 155 SRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT 234 (499)
Q Consensus 155 ~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~ 234 (499)
.....+++++||+.+++|+.+. .+|.+|.+|+++.+.+++||||||.+... ++++||+.+++|+.+...+.+|.
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGG
T ss_pred CCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCC
Confidence 6657899999999999999986 57899999999997566699999987655 89999999999999976667899
Q ss_pred cCcccEEEEEC---CEEEEEeCCCCC--CCcceEEEEECCCCc------eEEeccCCCCCCCCCCCCceEEEEEcCceEE
Q 010847 235 GRAGHAGITID---ENWYIVGGGDNN--NGCQETIVLNMTKLA------WSILTSVKGRNPLASEGLSVCSAIIEGEHHL 303 (499)
Q Consensus 235 ~r~~~~~~~~~---~~l~v~GG~~~~--~~~~~~~~~d~~~~~------W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l 303 (499)
+|++|++++++ ++|||+||.+.. ..++++++||+.++. |+.+..+| +.+|.+|+++ ++++ +.|
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p---~~~R~~~~~~--~~~~-~~i 610 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP---LFQRYGSQIK--YITP-RKL 610 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG---GGCCBSCEEE--EEET-TEE
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC---CCCcccceEE--EeCC-CEE
Confidence 99999988876 889999998544 446899999999999 88887643 3456666543 3441 479
Q ss_pred EEEcCCCCC----CCceEEEEECCCCCCCCC
Q 010847 304 VAFGGYNGK----YNNEVFVMRLKPRDIPRP 330 (499)
Q Consensus 304 ~v~GG~~~~----~~~~~~~~~~~~~~W~~~ 330 (499)
||+||.+.. ..+++++||+.+++|...
T Consensus 611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 611 LIVGGTSPSGLFDRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp EEECCBCSSCCCCTTTSEEEEETTTTEEEEC
T ss_pred EEECCccCCCCCCCCCeEEEEECCCCeEEEe
Confidence 999998643 478999999999999843
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=5.2e-33 Score=295.92 Aligned_cols=317 Identities=10% Similarity=0.041 Sum_probs=226.8
Q ss_pred CccccCCCCCeEEcccCCCCCCc-----ccceEEEEcCCCCCc------ccCcEEEEEcCCCceEEeeeCcccccCcccc
Q 010847 5 SWHLELPYDLWVTLPVSGARPSP-----RYKKLYIVGGSRNGR------FLSDVQVFDLRSLAWSNLRLETELDADKTED 73 (499)
Q Consensus 5 ~~~~~~~~~~W~~~~~~~~~p~~-----r~~~l~~~GG~~~~~------~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 73 (499)
..+|||..++|..++..+..+.. +.++||++||..... ..+.+++||+.+++|+.++.++
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~--------- 238 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV--------- 238 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE---------
T ss_pred cccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC---------
Confidence 46799999999987743222211 123899999975432 2457999999999999998764
Q ss_pred CCCCCCCCCcccee--EE-EECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEE
Q 010847 74 SGLLEVLPPMSDHC--MV-KWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIF 149 (499)
Q Consensus 74 ~~~~~~p~~r~~~s--~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~ 149 (499)
.+|..|+ ++ ..+++||++||.... ++++||+.+++|+.++ +||.+|.+|+++++ +++||++
T Consensus 239 -------~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 239 -------TKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp -------CSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEE
T ss_pred -------CCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECC---CCCccccccceEEecCCeEEEE
Confidence 2454443 33 358999999997643 5999999999999997 89999999999999 9999999
Q ss_pred cCcCCCCCccCcEEEEECCCCeeEEeeecC--CCCCCCccceEEEEcCcEEEEEcCCCCC----CCCCcEEEEECCCCce
Q 010847 150 GGEDRSRKLLNDVHFLDLETMTWDAVEVTQ--TPPAPRYDHSAALHANRYLIVFGGCSHS----IFFNDLHVLDLQTNEW 223 (499)
Q Consensus 150 GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~--~~p~~r~~~~~~~~~~~~l~v~GG~~~~----~~~~~i~~~d~~~~~W 223 (499)
||........+++++||+.+++|+.+...+ +++..+. ++++.. ++++|+|||.++. ...++++.||+.++.|
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred eCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeec-CCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 996444446889999999999999985432 2333333 233333 5569999998644 3467899999999998
Q ss_pred EecccCCCC----CCcCcccEEEE---ECCEEEEEeCCCC---CCCcc---eEEEEECCCCceEEec--cCCCCCCCCCC
Q 010847 224 SQPEIKGDL----VTGRAGHAGIT---IDENWYIVGGGDN---NNGCQ---ETIVLNMTKLAWSILT--SVKGRNPLASE 288 (499)
Q Consensus 224 ~~~~~~~~~----p~~r~~~~~~~---~~~~l~v~GG~~~---~~~~~---~~~~~d~~~~~W~~l~--~~~~~~p~~~~ 288 (499)
......... +.++..++++. ++++|||+||.+. ...++ ++++||+.++.|..+. .+ |.+|.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m----p~~R~ 457 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL----YFART 457 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC----SSCCB
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC----CCCcc
Confidence 764321111 12334445553 4899999999643 22234 7889999999999886 33 33444
Q ss_pred CCceEEEEEcCceEEEEEcCCCC-------CCCceEEEEECCCCCCCCCcccCCchhhhhhhhh---HHHHHhccc
Q 010847 289 GLSVCSAIIEGEHHLVAFGGYNG-------KYNNEVFVMRLKPRDIPRPKIFQSPAAAAAAASV---TAAYALAKS 354 (499)
Q Consensus 289 ~~~~~~~~~~~~~~l~v~GG~~~-------~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 354 (499)
.+. ++++.+ +.|||+||.+. ...+++++||+..++|.....++.++..++.+.+ ..+|+++|.
T Consensus 458 ~~~--~~~l~~-g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 458 FHT--SVVLPD-GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCE--EEECTT-SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCC--eEECCC-CCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 443 334422 36899999752 3467899999999999999988988887765544 346666664
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=6.5e-31 Score=279.74 Aligned_cols=291 Identities=10% Similarity=0.063 Sum_probs=211.3
Q ss_pred CccccCCCCCeEEcccCCCCCCccc--------ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCC
Q 010847 5 SWHLELPYDLWVTLPVSGARPSPRY--------KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGL 76 (499)
Q Consensus 5 ~~~~~~~~~~W~~~~~~~~~p~~r~--------~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 76 (499)
.+.|||.+++|..++..+......+ ++||++||.... ++++||+.+++|..++.+
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~------------- 283 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDM------------- 283 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCC-------------
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCC-------------
Confidence 5789999999999874321111111 299999997543 799999999999999876
Q ss_pred CCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCC--CCCCCCcceEEEEECCEEEEEcCcC
Q 010847 77 LEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG--KVPVARGGHSVTLVGSRLIIFGGED 153 (499)
Q Consensus 77 ~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g--~~p~~r~~~~~~~~~~~lyv~GG~~ 153 (499)
|.+|.+|+++++ +++||++||........+++++||+.+++|+.++..+ +++.++.. +++..++++|+|||.+
T Consensus 284 ---~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 284 ---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKK 359 (656)
T ss_dssp ---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGG
T ss_pred ---CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCC
Confidence 458999999999 9999999995443334788999999999999985432 34444443 5555789999999986
Q ss_pred CCC---CccCcEEEEECCCCeeEEeeecCCC----CCCCccceEEEE--cCcEEEEEcCCCC---CCCCC---cEEEEEC
Q 010847 154 RSR---KLLNDVHFLDLETMTWDAVEVTQTP----PAPRYDHSAALH--ANRYLIVFGGCSH---SIFFN---DLHVLDL 218 (499)
Q Consensus 154 ~~~---~~~~~v~~yd~~t~~W~~~~~~~~~----p~~r~~~~~~~~--~~~~l~v~GG~~~---~~~~~---~i~~~d~ 218 (499)
+.. ...++++.||+.++.|......... +.++..++++.+ .+++||+|||... ...++ .+++||+
T Consensus 360 g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~ 439 (656)
T 1k3i_A 360 GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP 439 (656)
T ss_dssp GCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST
T ss_pred CcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC
Confidence 431 1467899999999998764432111 123445555553 3677999999642 33445 7899999
Q ss_pred CCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCC------CCcceEEEEECCCCceEEeccCCCCCCCCCCCCc
Q 010847 219 QTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNN------NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLS 291 (499)
Q Consensus 219 ~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~------~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~ 291 (499)
.+++|..+. .+.+|.+|..|+++.+ +++|||+||.+.. ...+++++||+.+++|+.+..+ |.+|.+|+
T Consensus 440 ~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~----~~~R~~hs 514 (656)
T 1k3i_A 440 GTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN----SIVRVYHS 514 (656)
T ss_dssp TSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC----SSCCCTTE
T ss_pred CCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC----CCcccccc
Confidence 999999874 2578999999999888 8999999996532 3357899999999999998765 34677776
Q ss_pred eEEEEEcCceEEEEEcCCCC-C---CCceEEEEECC
Q 010847 292 VCSAIIEGEHHLVAFGGYNG-K---YNNEVFVMRLK 323 (499)
Q Consensus 292 ~~~~~~~~~~~l~v~GG~~~-~---~~~~~~~~~~~ 323 (499)
.+.+..++ .|||+||... . ...++.+|.+.
T Consensus 515 ~a~ll~dg--~v~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 515 ISLLLPDG--RVFNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp EEEECTTS--CEEEEECCCCTTCSCCCCEEEEEECG
T ss_pred HhhcCCCc--EEEecCCCCCCCCCCCeeEEEEEeCh
Confidence 54433344 5888898532 1 23356666653
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.31 E-value=0.002 Score=61.41 Aligned_cols=233 Identities=9% Similarity=0.005 Sum_probs=132.8
Q ss_pred cCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 44 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 44 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
-+.+-.||+.++++...-.... ...+.+...+.++..++++|+.... .+.+.++|+.+++-..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~-----------n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRA-----------NGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHH-----------HSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhh-----------cCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEE
Confidence 4579999999998865321100 0012334456677789999998753 3459999999987633
Q ss_pred -eecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC-ccceEEEEcCcEEEE
Q 010847 124 -METSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR-YDHSAALHANRYLIV 200 (499)
Q Consensus 124 -~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~l~v 200 (499)
++ .... -+.++. .+++||+.... .+.+.++|+.+.+-...-..+...... .-+.++. .++++|+
T Consensus 79 ~i~---~~~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv 145 (328)
T 3dsm_A 79 RIT---GFTS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYV 145 (328)
T ss_dssp EEE---CCSS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEE
T ss_pred EcC---CCCC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEE
Confidence 32 1211 223333 67899997642 357999999998765332223210000 1123333 5777888
Q ss_pred EcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCC-----cceEEEEECCCCceE
Q 010847 201 FGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNG-----CQETIVLNMTKLAWS 274 (499)
Q Consensus 201 ~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~-----~~~~~~~d~~~~~W~ 274 (499)
..- ...+.+.++|+.+++....-..+..| +.++.. ++++|+......... .+.++++|+.+.+..
T Consensus 146 ~~~----~~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 146 NCW----SYQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp EEC----TTCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred EcC----CCCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 742 01357999999988755421112222 222332 467777754321111 257999999988765
Q ss_pred EeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCCC
Q 010847 275 ILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 328 (499)
Q Consensus 275 ~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W~ 328 (499)
.....+.. ......+...+...||+..+ .++++|+...+..
T Consensus 217 ~~~~~~~g------~~p~~la~~~d~~~lyv~~~-------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 217 KQFKFKLG------DWPSEVQLNGTRDTLYWINN-------DIWRMPVEADRVP 257 (328)
T ss_dssp EEEECCTT------CCCEEEEECTTSCEEEEESS-------SEEEEETTCSSCC
T ss_pred EEEecCCC------CCceeEEEecCCCEEEEEcc-------EEEEEECCCCcee
Confidence 33222210 01122233333567887654 7899999876653
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.22 E-value=0.0013 Score=62.71 Aligned_cols=237 Identities=8% Similarity=-0.040 Sum_probs=130.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEE-eeeCcccccCccccCCCCCCCCCccceeEEE-ECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSN-LRLETELDADKTEDSGLLEVLPPMSDHCMVK-WGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~-~~~~iyv~GG~~~~~~~~ 108 (499)
++|+... ..+.+.++|+.+++-.. ++.. ...+.++. -++++|+.... .
T Consensus 55 ~lyv~~~-----~~~~v~viD~~t~~~~~~i~~~-------------------~~p~~i~~~~~g~lyv~~~~------~ 104 (328)
T 3dsm_A 55 IGWIVVN-----NSHVIFAIDINTFKEVGRITGF-------------------TSPRYIHFLSDEKAYVTQIW------D 104 (328)
T ss_dssp EEEEEEG-----GGTEEEEEETTTCCEEEEEECC-------------------SSEEEEEEEETTEEEEEEBS------C
T ss_pred EEEEEEc-----CCCEEEEEECcccEEEEEcCCC-------------------CCCcEEEEeCCCeEEEEECC------C
Confidence 5666643 13569999999987633 3211 12233343 67899988643 3
Q ss_pred ceEEEEECCCCcEEEeecCCCCCC-CCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPV-ARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
+.+.++|+.+++-...-..+.... ...-..++..+++||+..- . ..+.+.++|+.+++....-..+..|
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~~p----- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGIQP----- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSSCB-----
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCCCc-----
Confidence 459999999987653322223110 0011234447889999842 0 2457999999998865443333222
Q ss_pred ceEEEEcCcEEEEEcCCCCCCC-----CCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCc
Q 010847 188 HSAALHANRYLIVFGGCSHSIF-----FNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGC 260 (499)
Q Consensus 188 ~~~~~~~~~~l~v~GG~~~~~~-----~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~ 260 (499)
+.++...++.+|+......... .+.++++|+.+.+....- ..+....-..++.. ++.+|+..+
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g~~p~~la~~~d~~~lyv~~~------- 244 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLGDWPSEVQLNGTRDTLYWINN------- 244 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTTCCCEEEEECTTSCEEEEESS-------
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCCCCceeEEEecCCCEEEEEcc-------
Confidence 2344445667777653221111 368999999988765321 12222222344444 456777643
Q ss_pred ceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEECCC
Q 010847 261 QETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 261 ~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.++++|+.+.+.......+. .+.....+.++ .+..|||....+......+++||+..
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEF------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCC------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred -EEEEEECCCCceeeeeeecC------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 68999998876421111110 01222334444 24578887632222345799999873
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00092 Score=60.30 Aligned_cols=205 Identities=16% Similarity=0.024 Sum_probs=128.7
Q ss_pred cceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEE
Q 010847 84 SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH 163 (499)
Q Consensus 84 ~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~ 163 (499)
.-+.+...++.||+-.|..+. +.+..+|+.+++-.... .+|....+..++..+++||+.... .+.++
T Consensus 22 ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~ 88 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWR------NHEGF 88 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSEEE
T ss_pred ccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEee------CCEEE
Confidence 334667778999999987653 45999999999876654 566666777888899999998543 56799
Q ss_pred EEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCCCCCcC-cccEE
Q 010847 164 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGR-AGHAG 241 (499)
Q Consensus 164 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r-~~~~~ 241 (499)
+||+.+.+-..--+ .+..+.+++. +++.||+.-| .+.++.+|+.+.+-.. +.+ ...+.+. .--.+
T Consensus 89 v~D~~tl~~~~ti~-----~~~~Gwglt~-dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lNeL 155 (243)
T 3mbr_X 89 VYDLATLTPRARFR-----YPGEGWALTS-DDSHLYMSDG------TAVIRKLDPDTLQQVGSIKV-TAGGRPLDNLNEL 155 (243)
T ss_dssp EEETTTTEEEEEEE-----CSSCCCEEEE-CSSCEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEE
T ss_pred EEECCcCcEEEEEe-----CCCCceEEee-CCCEEEEECC------CCeEEEEeCCCCeEEEEEEE-ccCCcccccceee
Confidence 99999876533222 2234555654 4566888655 3579999999876433 332 1222232 22245
Q ss_pred EEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCC-----CCCCceEEEEE-cCceEEEEEcCCCCCCCc
Q 010847 242 ITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLA-----SEGLSVCSAII-EGEHHLVAFGGYNGKYNN 315 (499)
Q Consensus 242 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~-----~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~ 315 (499)
..+++++|+--- ..+++.+.|+.++.-...-++....|.. ........+.. ...+.|||.| +..+
T Consensus 156 e~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG----K~wp 226 (243)
T 3mbr_X 156 EWVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG----KRWP 226 (243)
T ss_dssp EEETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE----TTCS
T ss_pred EEeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC----CCCC
Confidence 566888886532 2458999999998755443333221111 12223333333 3356888876 3456
Q ss_pred eEEEEECC
Q 010847 316 EVFVMRLK 323 (499)
Q Consensus 316 ~~~~~~~~ 323 (499)
.+|...+.
T Consensus 227 ~~~~v~~~ 234 (243)
T 3mbr_X 227 MLYEIRLT 234 (243)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEe
Confidence 77766653
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.06 E-value=0.00083 Score=60.58 Aligned_cols=150 Identities=19% Similarity=0.147 Sum_probs=99.0
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||+-.|..+ -+.+.++|+.+++=.....++ ....+..++..+++||+.... .+.
T Consensus 32 ~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~----------------~~~fgeGi~~~~~~ly~ltw~------~~~ 86 (243)
T 3mbr_X 32 HLYESTGETG---RSSVRKVDLETGRILQRAEVP----------------PPYFGAGIVAWRDRLIQLTWR------NHE 86 (243)
T ss_dssp EEEEEECCTT---SCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEESS------SSE
T ss_pred EEEEECCCCC---CceEEEEECCCCCEEEEEeCC----------------CCcceeEEEEeCCEEEEEEee------CCE
Confidence 7788777543 257899999999876655442 245677888899999998543 345
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeE-EeeecCCCCCCCccce
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-AVEVTQTPPAPRYDHS 189 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~-~~~~~~~~p~~r~~~~ 189 (499)
+++||+.+.+-..-- |.+..+.+++..+++||+.-| .+.++.+|+.|.+-. .+.+ +..+.+.....
T Consensus 87 v~v~D~~tl~~~~ti-----~~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lN 153 (243)
T 3mbr_X 87 GFVYDLATLTPRARF-----RYPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKV-TAGGRPLDNLN 153 (243)
T ss_dssp EEEEETTTTEEEEEE-----ECSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEEC-EETTEECCCEE
T ss_pred EEEEECCcCcEEEEE-----eCCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEE-ccCCcccccce
Confidence 999999988643322 223356777777788998754 457999999997643 3333 22233333322
Q ss_pred EEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 190 AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 190 ~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
...+.++.||+-- ...|+|.+.|+.+++-
T Consensus 154 eLe~~~G~lyanv-----w~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 154 ELEWVNGELLANV-----WLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEETTEEEEEE-----TTTTEEEEECTTTCBE
T ss_pred eeEEeCCEEEEEE-----CCCCeEEEEECCCCCE
Confidence 2223366677532 2357899999999873
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.92 E-value=0.0044 Score=56.40 Aligned_cols=202 Identities=10% Similarity=-0.005 Sum_probs=121.6
Q ss_pred eeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEE
Q 010847 86 HCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFL 165 (499)
Q Consensus 86 ~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~y 165 (499)
..+...++.||+..|..+. +.+.++|+.|++-..-. .++....+..++..+++||+.... .+.+++|
T Consensus 46 qGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~~ly~ltw~------~~~v~v~ 112 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKDKIVGLTWK------NGLGFVW 112 (262)
T ss_dssp EEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSEEEEE
T ss_pred ceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEE---ecCCccceeEEEEeCCEEEEEEee------CCEEEEE
Confidence 4445558999999987653 45999999999865544 455555666788889999998553 5679999
Q ss_pred ECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCCCCCcCcc-cEEEE
Q 010847 166 DLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG-HAGIT 243 (499)
Q Consensus 166 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~-~~~~~ 243 (499)
|+.+.+-..--+ .+-.+.+++. +++.||+.-| .+.++.+|+.+.+-.. +.+. ....+... -.+..
T Consensus 113 D~~t~~~~~ti~-----~~~eG~glt~-dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~lNELe~ 179 (262)
T 3nol_A 113 NIRNLRQVRSFN-----YDGEGWGLTH-NDQYLIMSDG------TPVLRFLDPESLTPVRTITVT-AHGEELPELNELEW 179 (262)
T ss_dssp ETTTCCEEEEEE-----CSSCCCCEEE-CSSCEEECCS------SSEEEEECTTTCSEEEEEECE-ETTEECCCEEEEEE
T ss_pred ECccCcEEEEEE-----CCCCceEEec-CCCEEEEECC------CCeEEEEcCCCCeEEEEEEec-cCCccccccceeEE
Confidence 999876532221 1224455554 4566888644 3679999999876433 3221 11112111 12455
Q ss_pred ECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCC----CCCCCceEEEEE-cCceEEEEEcCCCCCCCceEE
Q 010847 244 IDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPL----ASEGLSVCSAII-EGEHHLVAFGGYNGKYNNEVF 318 (499)
Q Consensus 244 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~----~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~ 318 (499)
.++.+|+--- ..+++.+.|+.++.-....+++...|. .........+.. ...+.|||.|- ..+.+|
T Consensus 180 ~~G~lyan~w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK----~Wp~~~ 250 (262)
T 3nol_A 180 VDGEIFANVW-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK----LWPKVF 250 (262)
T ss_dssp ETTEEEEEET-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET----TCSEEE
T ss_pred ECCEEEEEEc-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC----CCCceE
Confidence 6888886432 245799999999875544444322111 011222333333 34567888763 355666
Q ss_pred EEEC
Q 010847 319 VMRL 322 (499)
Q Consensus 319 ~~~~ 322 (499)
...+
T Consensus 251 ev~~ 254 (262)
T 3nol_A 251 EITL 254 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 24
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.90 E-value=0.0081 Score=55.11 Aligned_cols=206 Identities=14% Similarity=-0.028 Sum_probs=119.7
Q ss_pred eeEEEEC-CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEE
Q 010847 86 HCMVKWG-TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHF 164 (499)
Q Consensus 86 ~s~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~ 164 (499)
+.++..+ +.||+..|... .+.+.++|+.+++-.... +++....+..++..+++||+..- ..+.+++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i---~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIH---KMDDSYFGEGLTLLNEKLYQVVW------LKNIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEET------TCSEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEE---ecCCCcceEEEEEeCCEEEEEEe------cCCEEEE
Confidence 5555555 79999877533 345999999999865543 33434455567777899999854 2567999
Q ss_pred EECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE-ecccCCCCCCcC-cccEEE
Q 010847 165 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS-QPEIKGDLVTGR-AGHAGI 242 (499)
Q Consensus 165 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~-~~~~~~~~p~~r-~~~~~~ 242 (499)
||+.+.+=..--+.+ .| .+.+++ .+++.+|+.-| .+.++.+|+.+.+-. .+.+ +..+.+. .-..+.
T Consensus 91 iD~~t~~v~~~i~~g-~~---~g~glt-~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~~nele 158 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-MK---DGWGLA-TDGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIRLNELE 158 (266)
T ss_dssp EETTTTEEEEEEECC-SS---SCCEEE-ECSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEE
T ss_pred EECCCCcEEEEEECC-CC---CeEEEE-ECCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCcccccceeEE
Confidence 999987543222222 12 233333 34566888654 468999999886633 3332 2122222 122344
Q ss_pred EECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCC-----CCCCCCc-eEEEEEcCceEEEEEcCCCCCCCce
Q 010847 243 TIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNP-----LASEGLS-VCSAIIEGEHHLVAFGGYNGKYNNE 316 (499)
Q Consensus 243 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p-----~~~~~~~-~~~~~~~~~~~l~v~GG~~~~~~~~ 316 (499)
..++.+|+--. ..+++.+.|+.+++-...-.+++..+ ....... ...+...+.+.+||.|+.. +.
T Consensus 159 ~~dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~----~~ 229 (266)
T 2iwa_A 159 YINGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW----PK 229 (266)
T ss_dssp EETTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC----SE
T ss_pred EECCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC----Ce
Confidence 45788886632 24579999999886443322221000 0001112 2233333456889888754 47
Q ss_pred EEEEECCCC
Q 010847 317 VFVMRLKPR 325 (499)
Q Consensus 317 ~~~~~~~~~ 325 (499)
+++.++...
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888887553
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.77 E-value=0.0038 Score=56.78 Aligned_cols=150 Identities=15% Similarity=0.052 Sum_probs=94.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||+-.|..+ -+.+.++|+.+++=...-+++ ....+..++..+++||+.... .+.
T Consensus 54 ~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~----------------~~~FgeGit~~g~~ly~ltw~------~~~ 108 (262)
T 3nol_A 54 YFYESTGLNG---RSSIRKVDIESGKTLQQIELG----------------KRYFGEGISDWKDKIVGLTWK------NGL 108 (262)
T ss_dssp EEEEEEEETT---EEEEEEECTTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEESS------SSE
T ss_pred EEEEECCCCC---CceEEEEECCCCcEEEEEecC----------------CccceeEEEEeCCEEEEEEee------CCE
Confidence 6666666432 246889999999866544432 234667788889999998543 345
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeE-EeeecCCCCCCCccc-
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD-AVEVTQTPPAPRYDH- 188 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~-~~~~~~~~p~~r~~~- 188 (499)
+++||+.+.+-..-- +.+-.+.+++..++.||+.-| .+.++.+|+.|.+-. .+... ..+.+....
T Consensus 109 v~v~D~~t~~~~~ti-----~~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~lN 175 (262)
T 3nol_A 109 GFVWNIRNLRQVRSF-----NYDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVT-AHGEELPELN 175 (262)
T ss_dssp EEEEETTTCCEEEEE-----ECSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECE-ETTEECCCEE
T ss_pred EEEEECccCcEEEEE-----ECCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEec-cCCccccccc
Confidence 999999988653322 222356667766778888644 357999999987643 33331 111122221
Q ss_pred eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 189 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 189 ~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
-+... ++.||+-- ...++|.+.|+.+++-.
T Consensus 176 ELe~~-~G~lyan~-----w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 176 ELEWV-DGEIFANV-----WQTNKIVRIDPETGKVT 205 (262)
T ss_dssp EEEEE-TTEEEEEE-----TTSSEEEEECTTTCBEE
T ss_pred eeEEE-CCEEEEEE-----ccCCeEEEEECCCCcEE
Confidence 12333 66677632 23578999999998743
No 26
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.71 E-value=0.0019 Score=58.84 Aligned_cols=147 Identities=13% Similarity=0.041 Sum_probs=93.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||+..|..+. +.++|+.+++=...- + +....+..++..+++||+.... .+.
T Consensus 66 ~Ly~stG~~g~-----v~~iD~~Tgkv~~~~-l----------------~~~~FgeGit~~g~~Ly~ltw~------~~~ 117 (268)
T 3nok_A 66 HFFESTGHQGT-----LRQLSLESAQPVWME-R----------------LGNIFAEGLASDGERLYQLTWT------EGL 117 (268)
T ss_dssp EEEEEETTTTE-----EEECCSSCSSCSEEE-E----------------CTTCCEEEEEECSSCEEEEESS------SCE
T ss_pred EEEEEcCCCCE-----EEEEECCCCcEEeEE-C----------------CCCcceeEEEEeCCEEEEEEcc------CCE
Confidence 67777774322 889999998764433 3 2234566788889999998543 345
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEE-eeecCCCCCCCccce
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDA-VEVTQTPPAPRYDHS 189 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~p~~r~~~~ 189 (499)
+++||+.+.+-..-- +.+-.+.+++..++.||+.-| .+.++.+|+.|.+-.. +.. +..+.+.....
T Consensus 118 v~V~D~~Tl~~~~ti-----~~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lN 184 (268)
T 3nok_A 118 LFTWSGMPPQRERTT-----RYSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQV-KLRGQPVELIN 184 (268)
T ss_dssp EEEEETTTTEEEEEE-----ECSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEEC-EETTEECCCEE
T ss_pred EEEEECCcCcEEEEE-----eCCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEe-CCCCccccccc
Confidence 999999998654322 222346677777889999754 4579999999976433 332 22222322222
Q ss_pred EEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 190 AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 190 ~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
-..+.++.||+-- ...++|.+.|+.+++-
T Consensus 185 eLe~~dG~lyanv-----w~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 185 ELECANGVIYANI-----WHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEETTEEEEEE-----TTCSEEEEECTTTCBE
T ss_pred ccEEeCCEEEEEE-----CCCCeEEEEeCCCCcE
Confidence 2222366677532 2357899999999873
No 27
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.70 E-value=0.03 Score=55.44 Aligned_cols=199 Identities=15% Similarity=0.179 Sum_probs=107.6
Q ss_pred EEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEEC
Q 010847 88 MVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 88 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++..++..++.|+.++ .+.+||+.+..-...- ........++.+++..++.|+.+ ..+.+||+
T Consensus 244 ~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d------~~i~i~d~ 306 (445)
T 2ovr_B 244 CVQYDGRRVVSGAYDF------MVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHVVSGSLD------TSIRVWDV 306 (445)
T ss_dssp EEEECSSCEEEEETTS------CEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEEEEEETT------SCEEEEET
T ss_pred EEEECCCEEEEEcCCC------EEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEEEEEeCC------CeEEEEEC
Confidence 3444666677776533 3888998776533222 11112223344466666776653 35899999
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCE
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDEN 247 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 247 (499)
.+.+-...-. + ......+....++ +++.|+.+ +.+.+||+.+..-...- .... .....-..+..++.
T Consensus 307 ~~~~~~~~~~-~----~~~~v~~~~~~~~-~l~~~~~d-----g~i~vwd~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~ 373 (445)
T 2ovr_B 307 ETGNCIHTLT-G----HQSLTSGMELKDN-ILVSGNAD-----STVKIWDIKTGQCLQTL-QGPN-KHQSAVTCLQFNKN 373 (445)
T ss_dssp TTCCEEEEEC-C----CCSCEEEEEEETT-EEEEEETT-----SCEEEEETTTCCEEEEE-CSTT-SCSSCEEEEEECSS
T ss_pred CCCCEEEEEc-C----CcccEEEEEEeCC-EEEEEeCC-----CeEEEEECCCCcEEEEE-ccCC-CCCCCEEEEEECCC
Confidence 8765432211 1 1122233344466 56666644 36899998776533211 1111 11122233444677
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEec-cCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILT-SVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~-~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+++.|+.++ .+.+||+.+......- .... .........+....+..++++|+.++.....+++||++..
T Consensus 374 ~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 374 FVITSSDDG-----TVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEETTS-----EEEEEETTTCCEEEEEEECTT----GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEEeCCC-----eEEEEECCCCceeeeeecccc----CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 777776442 5889999887654321 1110 0111223344455556778889888766667889998653
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.64 E-value=0.0068 Score=58.79 Aligned_cols=225 Identities=16% Similarity=0.095 Sum_probs=117.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+|+.|+.+ ..+.+||+.+++-...-... ..-.+++.. +..||+.|+.+
T Consensus 3 ~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~d------ 53 (391)
T 1l0q_A 3 FAYIANSES-----DNISVIDVTSNKVTATIPVG------------------SNPMGAVISPDGTKVYVANAHS------ 53 (391)
T ss_dssp EEEEEETTT-----TEEEEEETTTTEEEEEEECS------------------SSEEEEEECTTSSEEEEEEGGG------
T ss_pred EEEEEcCCC-----CEEEEEECCCCeEEEEeecC------------------CCcceEEECCCCCEEEEECCCC------
Confidence 467777643 35899999988654432221 111222222 45677777543
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
..+.++|+.+++...... .+. .-.+++.. +..||+.|.. .+.+++||+.+++.......+ ..
T Consensus 54 ~~i~v~d~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~-----~~ 117 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG-----KS 117 (391)
T ss_dssp TEEEEEETTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS-----SS
T ss_pred CeEEEEECCCCeEEEEEE---CCC--CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC-----CC
Confidence 359999999887654432 111 11222222 3456666543 246999999988765443221 11
Q ss_pred cceEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceE
Q 010847 187 DHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 263 (499)
Q Consensus 187 ~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~ 263 (499)
-..++... ++.+|+.++.+ +.+++||+.+.+....-..+ .....++.. ++.+|+.++.+ ..+
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~dg~~l~~~~~~~-----~~v 182 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPDGTKVYVANFDS-----MSI 182 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETTT-----TEE
T ss_pred cceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC-----CCcceEEECCCCCEEEEEeCCC-----CEE
Confidence 22333333 44566666533 47999999887755432111 111233333 23566665532 358
Q ss_pred EEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 264 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 264 ~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.++|+.+.......... ..........+..+|++.+.. .....++++|+...
T Consensus 183 ~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~--~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 183 SVIDTVTNSVIDTVKVE--------AAPSGIAVNPEGTKAYVTNVD--KYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEETTTTEEEEEEECS--------SEEEEEEECTTSSEEEEEEEC--SSCCEEEEEETTTT
T ss_pred EEEECCCCeEEEEEecC--------CCccceEECCCCCEEEEEecC--cCCCcEEEEECCCC
Confidence 99999887654332211 111122222333456654421 01346788887654
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.61 E-value=0.04 Score=50.45 Aligned_cols=193 Identities=10% Similarity=-0.086 Sum_probs=111.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||+..|..+ .+.+.++|+.+++=...-+++ ....+..++..++.||+..-. .+.
T Consensus 33 ~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~----------------~~~fgeGi~~~g~~lyv~t~~------~~~ 87 (266)
T 2iwa_A 33 TLFESTGLYG---RSSVRQVALQTGKVENIHKMD----------------DSYFGEGLTLLNEKLYQVVWL------KNI 87 (266)
T ss_dssp EEEEEECSTT---TCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEEETTEEEEEETT------CSE
T ss_pred eEEEECCCCC---CCEEEEEECCCCCEEEEEecC----------------CCcceEEEEEeCCEEEEEEec------CCE
Confidence 7888776322 357999999999865543332 233556777789999998542 345
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccc-e
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH-S 189 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~-~ 189 (499)
+.+||+.+.+-..--+.+ +| .+..++..++++|+.-| .+.++.+|+.+.+-..--..+..+.+.... .
T Consensus 88 v~viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 999999987543222122 23 34455555678998643 457999999987643332222222232222 2
Q ss_pred EEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCC--------CCCcCcccEEEEE--CCEEEEEeCCCCCC
Q 010847 190 AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGD--------LVTGRAGHAGITI--DENWYIVGGGDNNN 258 (499)
Q Consensus 190 ~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~--------~p~~r~~~~~~~~--~~~l~v~GG~~~~~ 258 (499)
+... ++.+|+--. ..+.|.+.|+.+++-.. +...+. .+..-.-.+++.. ++++||.|+..
T Consensus 157 le~~-dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~--- 227 (266)
T 2iwa_A 157 LEYI-NGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW--- 227 (266)
T ss_dssp EEEE-TTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---
T ss_pred EEEE-CCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---
Confidence 2333 667776432 24789999999886322 211110 0111122344444 45899988743
Q ss_pred CcceEEEEECCC
Q 010847 259 GCQETIVLNMTK 270 (499)
Q Consensus 259 ~~~~~~~~d~~~ 270 (499)
+.++..++..
T Consensus 228 --~~v~~i~l~~ 237 (266)
T 2iwa_A 228 --PKLFEIKLHL 237 (266)
T ss_dssp --SEEEEEEEEE
T ss_pred --CeEEEEEEec
Confidence 3566666543
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.53 E-value=0.013 Score=56.80 Aligned_cols=226 Identities=13% Similarity=0.051 Sum_probs=116.9
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.||+.|+.+ ..+.+||+.+++....-... ..-.+++.. ++.||+.|.. .
T Consensus 45 ~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~------------------~~v~~~~~spdg~~l~~~~~~------~ 95 (391)
T 1l0q_A 45 KVYVANAHS-----NDVSIIDTATNNVIATVPAG------------------SSPQGVAVSPDGKQVYVTNMA------S 95 (391)
T ss_dssp EEEEEEGGG-----TEEEEEETTTTEEEEEEECS------------------SSEEEEEECTTSSEEEEEETT------T
T ss_pred EEEEECCCC-----CeEEEEECCCCeEEEEEECC------------------CCccceEECCCCCEEEEEECC------C
Confidence 566666532 36899999988765543321 111222222 4567666543 2
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
..+.+||+.+++....... . ..-.+++.. +..||+.++. .+.+++||+.+.+....-..+..
T Consensus 96 ~~v~v~d~~~~~~~~~~~~---~--~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~----- 159 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKT---G--KSPLGLALSPDGKKLYVTNNG------DKTVSVINTVTKAVINTVSVGRS----- 159 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC---S--SSEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECCSS-----
T ss_pred CEEEEEECCCCeEEEEEeC---C--CCcceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEecCCC-----
Confidence 4599999999876544321 1 112233332 3367777653 34699999998876554432211
Q ss_pred cceEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEE
Q 010847 187 DHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETI 264 (499)
Q Consensus 187 ~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~ 264 (499)
-..++... ++.+|+.++.+ +.+++||+.+........ ......+++.. ++..+++++.+. ....+.
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~--~~~~v~ 227 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVK-----VEAAPSGIAVNPEGTKAYVTNVDK--YFNTVS 227 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE-----CSSEEEEEEECTTSSEEEEEEECS--SCCEEE
T ss_pred cceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEe-----cCCCccceEECCCCCEEEEEecCc--CCCcEE
Confidence 12333333 44566665543 469999998876544311 11111122222 333344433211 124689
Q ss_pred EEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 265 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 265 ~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+||+.+..-... ++.. ..........+..+|++.++.++ .+.++|+...
T Consensus 228 ~~d~~~~~~~~~--~~~~------~~~~~~~~s~dg~~l~~s~~~d~----~v~v~d~~~~ 276 (391)
T 1l0q_A 228 MIDTGTNKITAR--IPVG------PDPAGIAVTPDGKKVYVALSFXN----TVSVIDTATN 276 (391)
T ss_dssp EEETTTTEEEEE--EECC------SSEEEEEECTTSSEEEEEETTTT----EEEEEETTTT
T ss_pred EEECCCCeEEEE--EecC------CCccEEEEccCCCEEEEEcCCCC----EEEEEECCCC
Confidence 999987754322 2111 01112222233456777666543 6778887654
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.49 E-value=0.026 Score=55.43 Aligned_cols=222 Identities=10% Similarity=-0.048 Sum_probs=111.1
Q ss_pred CCccccCCCCCeEEcc---cCCCCCCcc---cceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCC
Q 010847 4 GSWHLELPYDLWVTLP---VSGARPSPR---YKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLL 77 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~---~~~~~p~~r---~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~ 77 (499)
.-|.+|+..+.+..+. ....+-... .+.+++.++.+ ..+.+||+.++......+....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~----------- 165 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKY----------- 165 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHH-----------
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccc-----------
Confidence 3466777666554332 111111111 22677776532 3489999999887654332110
Q ss_pred CCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcC
Q 010847 78 EVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGED 153 (499)
Q Consensus 78 ~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~ 153 (499)
.........+.+ ++.+|+.|+.+ ..+.+||+.+++...... .. ...-.+++.. ++.+|+.++.+
T Consensus 166 --~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~l~~~~~~~ 233 (433)
T 3bws_A 166 --KKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVD---LT-GKWSKILLYDPIRDLVYCSNWIS 233 (433)
T ss_dssp --HTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEE---CS-SSSEEEEEEETTTTEEEEEETTT
T ss_pred --cccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEc---CC-CCCeeEEEEcCCCCEEEEEecCC
Confidence 001112222333 67888887643 349999998876543321 11 1111222322 34677776532
Q ss_pred CCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCC---CCCcEEEEECCCCceEecccCC
Q 010847 154 RSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---FFNDLHVLDLQTNEWSQPEIKG 230 (499)
Q Consensus 154 ~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~---~~~~i~~~d~~~~~W~~~~~~~ 230 (499)
..+.+||+.+.+...... ....-..++...++..+++++..... .-..+++||+.+.+......
T Consensus 234 ------~~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-- 300 (433)
T 3bws_A 234 ------EDISVIDRKTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-- 300 (433)
T ss_dssp ------TEEEEEETTTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--
T ss_pred ------CcEEEEECCCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--
Confidence 369999998876543321 11112223333344344444432211 12478999998775433210
Q ss_pred CCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 231 DLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 231 ~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
.+.....++.. ++.+|+.++.+ ..+.+||+.+..-.
T Consensus 301 ---~~~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 301 ---PPGNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQ 338 (433)
T ss_dssp ---EEECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred ---CCCCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEE
Confidence 01111122222 23577776533 36889999876543
No 32
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.40 E-value=0.1 Score=50.20 Aligned_cols=205 Identities=13% Similarity=0.115 Sum_probs=110.4
Q ss_pred CccccCCCCC--eEEcccCCC--CCCcccceEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCC
Q 010847 5 SWHLELPYDL--WVTLPVSGA--RPSPRYKKLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLE 78 (499)
Q Consensus 5 ~~~~~~~~~~--W~~~~~~~~--~p~~r~~~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~ 78 (499)
-+++|+.+++ |..-..... .|....+.||+..+ ...++.||+.+++ |+.......
T Consensus 115 l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~------------- 175 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPS------------- 175 (376)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---------------
T ss_pred EEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCc-------------
Confidence 3567776554 654332111 12222225555332 2369999998886 776432210
Q ss_pred CCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCC--cEEEeecCCCCCCCC--------cceEEEEECCEEEE
Q 010847 79 VLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVAR--------GGHSVTLVGSRLII 148 (499)
Q Consensus 79 ~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~g~~p~~r--------~~~~~~~~~~~lyv 148 (499)
...+...+.+..++.||+ |.. ...++.||+.++ .|+... ..|... .....+..++.||+
T Consensus 176 -~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~v~~ 244 (376)
T 3q7m_A 176 -LSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVDTTPVVVNGVVFA 244 (376)
T ss_dssp ----CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC-----------CCCCCCEEETTEEEE
T ss_pred -eeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCCCCcccccccccCCCcEEECCEEEE
Confidence 111223344556787776 322 234999999877 466543 112111 22333456788887
Q ss_pred EcCcCCCCCccCcEEEEECCCC--eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eE
Q 010847 149 FGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WS 224 (499)
Q Consensus 149 ~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~ 224 (499)
.+. ...+++||+.++ .|.... + ......+.++.+|+... ...++.||+.+++ |+
T Consensus 245 ~~~-------~g~l~~~d~~tG~~~w~~~~-----~----~~~~~~~~~~~l~~~~~------~g~l~~~d~~tG~~~w~ 302 (376)
T 3q7m_A 245 LAY-------NGNLTALDLRSGQIMWKREL-----G----SVNDFIVDGNRIYLVDQ------NDRVMALTIDGGVTLWT 302 (376)
T ss_dssp ECT-------TSCEEEEETTTCCEEEEECC-----C----CEEEEEEETTEEEEEET------TCCEEEEETTTCCEEEE
T ss_pred Eec-------CcEEEEEECCCCcEEeeccC-----C----CCCCceEECCEEEEEcC------CCeEEEEECCCCcEEEe
Confidence 642 236899999876 475431 1 11223344666777653 2369999998876 76
Q ss_pred ecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 225 QPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 225 ~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
... . ..+...+.+..++.+|+... ...++.||+.+++
T Consensus 303 ~~~----~-~~~~~~~~~~~~~~l~v~~~------~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 303 QSD----L-LHRLLTSPVLYNGNLVVGDS------EGYLHWINVEDGR 339 (376)
T ss_dssp ECT----T-TTSCCCCCEEETTEEEEECT------TSEEEEEETTTCC
T ss_pred ecc----c-CCCcccCCEEECCEEEEEeC------CCeEEEEECCCCc
Confidence 631 1 11222334556788777532 1258999998876
No 33
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.34 E-value=0.02 Score=52.10 Aligned_cols=199 Identities=12% Similarity=-0.022 Sum_probs=117.3
Q ss_pred eeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEE
Q 010847 86 HCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFL 165 (499)
Q Consensus 86 ~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~y 165 (499)
..+...++.||+..|..+. +.++|+.+++-..-. +|....+..++..+++||+.... .+.+++|
T Consensus 58 qGL~~~~~~Ly~stG~~g~------v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~ 121 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT------LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT------EGLLFTW 121 (268)
T ss_dssp EEEEEETTEEEEEETTTTE------EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS------SCEEEEE
T ss_pred ceEEEECCEEEEEcCCCCE------EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc------CCEEEEE
Confidence 4556668999999886432 899999998653332 33344556677788999998553 4679999
Q ss_pred ECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCCCCCcCcc-cEEEE
Q 010847 166 DLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAG-HAGIT 243 (499)
Q Consensus 166 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~-~~~~~ 243 (499)
|+.+.+-..--+ .+-.+.+++. +++.||+.-| .+.++.+|+.+.+-.. +.+ ...+.+... -.+..
T Consensus 122 D~~Tl~~~~ti~-----~~~eGwGLt~-Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 122 SGMPPQRERTTR-----YSGEGWGLCY-WNGKLVRSDG------GTMLTFHEPDGFALVGAVQV-KLRGQPVELINELEC 188 (268)
T ss_dssp ETTTTEEEEEEE-----CSSCCCCEEE-ETTEEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEE
T ss_pred ECCcCcEEEEEe-----CCCceeEEec-CCCEEEEECC------CCEEEEEcCCCCeEEEEEEe-CCCCcccccccccEE
Confidence 999876543222 1223455554 4667888765 3589999999876433 322 112222211 23455
Q ss_pred ECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCC---C--CCCCCCceEEEEEc-CceEEEEEcCCCCCCCceE
Q 010847 244 IDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---P--LASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEV 317 (499)
Q Consensus 244 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~---p--~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~ 317 (499)
.++.+|+-- ...+++.+.|+.++.-...-++.... + ..........+..+ ..+.|||.| +....+
T Consensus 189 ~dG~lyanv-----w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG----K~Wp~~ 259 (268)
T 3nok_A 189 ANGVIYANI-----WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG----KLWPRL 259 (268)
T ss_dssp ETTEEEEEE-----TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE----TTCSEE
T ss_pred eCCEEEEEE-----CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC----CCCCce
Confidence 688888542 12457999999998754433332110 0 11122233334443 356788766 345566
Q ss_pred EEEEC
Q 010847 318 FVMRL 322 (499)
Q Consensus 318 ~~~~~ 322 (499)
|...+
T Consensus 260 ~ev~~ 264 (268)
T 3nok_A 260 FEVRL 264 (268)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65443
No 34
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.28 E-value=0.024 Score=55.77 Aligned_cols=227 Identities=13% Similarity=0.037 Sum_probs=116.0
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEee
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVME 125 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 125 (499)
.++.+|+.++++..+...... . .....+... ++.+++.++.. ..+.++|+.++......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-----------~---~~~~~~~s~-~~~~~~~~~~~------~~i~~~d~~~g~~~~~~ 160 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-----------F---QPKSVRFID-NTRLAIPLLED------EGMDVLDINSGQTVRLS 160 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-----------S---CBCCCEESS-SSEEEEEBTTS------SSEEEEETTTCCEEEEC
T ss_pred EEEEECCCCCcceEEEEEcCC-----------C---CceEEEEeC-CCeEEEEeCCC------CeEEEEECCCCeEeeec
Confidence 688888887777666554210 0 111112222 67888877643 23999999998776543
Q ss_pred cCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc-CcEEEEEc
Q 010847 126 TSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFG 202 (499)
Q Consensus 126 ~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~G 202 (499)
..+..+.......++.+ ++.+|+.|+.+ ..+.+||+.+.+....-.. ....-.+++... +..+|+.+
T Consensus 161 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 161 PPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp CCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEE
T ss_pred CcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEe
Confidence 11111111112223333 57888877643 4689999988654332211 111112233333 45566665
Q ss_pred CCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCC---CcceEEEEECCCCceEEecc
Q 010847 203 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNN---GCQETIVLNMTKLAWSILTS 278 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~---~~~~~~~~d~~~~~W~~l~~ 278 (499)
+.+ +.+++||+.+......- +....-.+++.. ++..+++++..... .-..+++||+.+..-.....
T Consensus 231 ~~~-----~~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~ 300 (433)
T 3bws_A 231 WIS-----EDISVIDRKTKLEIRKT-----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG 300 (433)
T ss_dssp TTT-----TEEEEEETTTTEEEEEC-----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE
T ss_pred cCC-----CcEEEEECCCCcEEEEe-----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc
Confidence 433 36999999887654421 111112233332 34444444432221 12368899998875443321
Q ss_pred CCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 279 VKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 279 ~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.+. .........+...+++.++.++ .+.+||+...
T Consensus 301 ~~~--------~~~~~~~~~~g~~l~~~~~~~~----~v~v~d~~~~ 335 (433)
T 3bws_A 301 PPG--------NKRHIVSGNTENKIYVSDMCCS----KIEVYDLKEK 335 (433)
T ss_dssp EEE--------CEEEEEECSSTTEEEEEETTTT----EEEEEETTTT
T ss_pred CCC--------CcceEEECCCCCEEEEEecCCC----EEEEEECCCC
Confidence 111 1111222223346777766544 7888888654
No 35
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.23 E-value=0.048 Score=53.80 Aligned_cols=222 Identities=14% Similarity=0.163 Sum_probs=114.3
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
..++.|+.+ ..+.+||..++.-...-.. ......++..++.+++.|+.++ .
T Consensus 144 ~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~------------------h~~~v~~l~~~~~~l~sg~~dg------~ 194 (435)
T 1p22_A 144 QKIVSGLRD-----NTIKIWDKNTLECKRILTG------------------HTGSVLCLQYDERVIITGSSDS------T 194 (435)
T ss_dssp SEEEEEESS-----SCEEEEESSSCCEEEEECC------------------CSSCEEEEECCSSEEEEEETTS------C
T ss_pred CEEEEEeCC-----CeEEEEeCCCCeEEEEEcC------------------CCCcEEEEEECCCEEEEEcCCC------e
Confidence 445555532 3588999887764332211 1122233444777777777543 3
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceE
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSA 190 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 190 (499)
+.++|+.++.-...- ........++.+++..++.|+.+ ..+.+||+.+..-...... .........+
T Consensus 195 i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~--~~~~~~~v~~ 261 (435)
T 1p22_A 195 VRVWDVNTGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRV--LVGHRAAVNV 261 (435)
T ss_dssp EEEEESSSCCEEEEE-----CCCCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEE--ECCCSSCEEE
T ss_pred EEEEECCCCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeE--ecCCCCcEEE
Confidence 999999888654332 11122233444555666666643 3588999877543211110 0112222334
Q ss_pred EEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 191 ALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 191 ~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
+.++++ .++.|+.+ ..+.+||+.+..-...-. + ......++..++..++.|+.++ .+.+||+.+
T Consensus 262 ~~~~~~-~l~s~~~d-----g~i~vwd~~~~~~~~~~~-~----~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~~ 325 (435)
T 1p22_A 262 VDFDDK-YIVSASGD-----RTIKVWNTSTCEFVRTLN-G----HKRGIACLQYRDRLVVSGSSDN-----TIRLWDIEC 325 (435)
T ss_dssp EEEETT-EEEEEETT-----SEEEEEETTTCCEEEEEE-C----CSSCEEEEEEETTEEEEEETTS-----CEEEEETTT
T ss_pred EEeCCC-EEEEEeCC-----CeEEEEECCcCcEEEEEc-C----CCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCC
Confidence 444566 55556543 368899988765333110 1 1111223334566777776443 478899887
Q ss_pred CceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 271 LAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 271 ~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
..-.. .+... ......+..++ .+++.|+.++ .+.++|+..
T Consensus 326 ~~~~~--~~~~h------~~~v~~~~~~~--~~l~sg~~dg----~i~vwd~~~ 365 (435)
T 1p22_A 326 GACLR--VLEGH------EELVRCIRFDN--KRIVSGAYDG----KIKVWDLVA 365 (435)
T ss_dssp CCEEE--EECCC------SSCEEEEECCS--SEEEEEETTS----CEEEEEHHH
T ss_pred CCEEE--EEeCC------cCcEEEEEecC--CEEEEEeCCC----cEEEEECCC
Confidence 65322 11111 11222333333 3466677665 677788643
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.085 Score=50.30 Aligned_cols=189 Identities=11% Similarity=0.082 Sum_probs=96.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEEC----CEEEEEcccCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWG----TKLLILGGHYKKSS 106 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~----~~iyv~GG~~~~~~ 106 (499)
.+++.|+.+ ..+.+||+...++..+..... ......++.+. +.+++.|+.++
T Consensus 24 ~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~~~~~~l~s~~~dg--- 79 (379)
T 3jrp_A 24 KRLATCSSD-----KTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSYDG--- 79 (379)
T ss_dssp SEEEEEETT-----SCEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCGGGCSEEEEEETTS---
T ss_pred CEEEEEECC-----CcEEEEecCCCcceeeeEecC----------------CCCcEEEEEeCCCCCCCEEEEeccCC---
Confidence 556666643 248888888777776655432 11222333332 56667776543
Q ss_pred CCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCcEEEEECCCCee-EEeeecCCC
Q 010847 107 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETMTW-DAVEVTQTP 181 (499)
Q Consensus 107 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~ 181 (499)
.+.+||+.++.|..+... ........++.+ + +.+++.|+.+ ..+.+||+.+..- ......+
T Consensus 80 ---~v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~-- 145 (379)
T 3jrp_A 80 ---KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA-- 145 (379)
T ss_dssp ---CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC--
T ss_pred ---EEEEEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC--
Confidence 388999999988776532 211222233333 2 4566776643 3588888876632 1111111
Q ss_pred CCCCccceEEEE-c-------------CcEEEEEcCCCCCCCCCcEEEEECCCCc--eEecccCCCCCCcCcccEEEEE-
Q 010847 182 PAPRYDHSAALH-A-------------NRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI- 244 (499)
Q Consensus 182 p~~r~~~~~~~~-~-------------~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~- 244 (499)
.......+.+ . ++.+++.|+.+ ..+.+||+.+.. +..+.... .....-.+++..
T Consensus 146 --~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp 216 (379)
T 3jrp_A 146 --HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSP 216 (379)
T ss_dssp --CTTCEEEEEECCCC----------CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECC
T ss_pred --CCCceEEEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEe--cccCcEeEEEECC
Confidence 1111122222 2 34567777654 358888876543 43331101 011111223333
Q ss_pred C---CEEEEEeCCCCCCCcceEEEEECCCC
Q 010847 245 D---ENWYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 245 ~---~~l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
+ +.+++.|+.++ .+.+||+.+.
T Consensus 217 ~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 217 TVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp CCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred CCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 3 56777776543 3677777665
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.08 E-value=0.13 Score=47.97 Aligned_cols=186 Identities=16% Similarity=0.040 Sum_probs=95.0
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.++++|+.+ ..+.+||+.++.......... .......+.+ ++..++.|+.++
T Consensus 110 ~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~~~dg----- 163 (337)
T 1gxr_A 110 CTLIVGGEA-----STLSIWDLAAPTPRIKAELTS----------------SAPACYALAISPDSKVCFSCCSDG----- 163 (337)
T ss_dssp SEEEEEESS-----SEEEEEECCCC--EEEEEEEC----------------SSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CEEEEEcCC-----CcEEEEECCCCCcceeeeccc----------------CCCceEEEEECCCCCEEEEEeCCC-----
Confidence 455555532 358899999887655443321 1111222222 455666666432
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
.+.+||+.++.....- .... .....+.+ ++..++.|+.+ ..+.+||+.+.+-..... . ...
T Consensus 164 -~v~~~d~~~~~~~~~~---~~~~--~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~---~--~~~ 226 (337)
T 1gxr_A 164 -NIAVWDLHNQTLVRQF---QGHT--DGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHD---F--TSQ 226 (337)
T ss_dssp -CEEEEETTTTEEEEEE---CCCS--SCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEE---C--SSC
T ss_pred -cEEEEeCCCCceeeee---eccc--CceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeec---C--CCc
Confidence 3999999887644332 1111 11222233 45566666543 368999998876433321 1 111
Q ss_pred cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEE
Q 010847 187 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIV 265 (499)
Q Consensus 187 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~ 265 (499)
-.+++...++.++++|+.+ +.+.+||+.+..-..+. . ....-.+++.. ++.+++.|+.+ ..+.+
T Consensus 227 v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~ 291 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLH--L---HESCVLSLKFAYCGKWFVSTGKD-----NLLNA 291 (337)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEEC--C---CSSCEEEEEECTTSSEEEEEETT-----SEEEE
T ss_pred eEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEc--C---CccceeEEEECCCCCEEEEecCC-----CcEEE
Confidence 2223333455466666643 35899998876533321 1 11111122222 35666666643 25788
Q ss_pred EECCCCceE
Q 010847 266 LNMTKLAWS 274 (499)
Q Consensus 266 ~d~~~~~W~ 274 (499)
||+.+..-.
T Consensus 292 ~~~~~~~~~ 300 (337)
T 1gxr_A 292 WRTPYGASI 300 (337)
T ss_dssp EETTTCCEE
T ss_pred EECCCCeEE
Confidence 998877644
No 38
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.05 E-value=0.1 Score=49.41 Aligned_cols=148 Identities=10% Similarity=0.027 Sum_probs=73.9
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
.++.+|..++++..+...... ... ..++.. +++||+.+.... ...+++||+.++.++.+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~---------------~~p-~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT---------------QNP-TYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC---------------SCC-CCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc---------------CCc-ceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEe
Confidence 477888889998876543210 111 112222 566777654211 34599999988887766
Q ss_pred ecCCCCCCCCcceEEEEECC-EEEEEcCcCCCCCccCcEEEEECC-CCeeEEeee---cCCCCCCCc----cceEEEEcC
Q 010847 125 ETSGKVPVARGGHSVTLVGS-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEV---TQTPPAPRY----DHSAALHAN 195 (499)
Q Consensus 125 ~~~g~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~---~~~~p~~r~----~~~~~~~~~ 195 (499)
..... ......+.+..-++ .||+.+.. .+.+.+|++. +.....+.. .+..|.+|. -+.++...+
T Consensus 79 ~~~~~-~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 79 NTVVA-PGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EEEEE-ESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT
T ss_pred eeeec-CCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC
Confidence 53100 11111122222234 56665431 2457888874 334433332 122222111 223333345
Q ss_pred cEEEEEcCCCCCCCCCcEEEEECC-CCceEe
Q 010847 196 RYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQ 225 (499)
Q Consensus 196 ~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~ 225 (499)
+.+|+.+... +.+++||+. ++....
T Consensus 152 g~l~v~~~~~-----~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 152 NRLAVIDLGS-----DKVYVYNVSDAGQLSE 177 (347)
T ss_dssp SCEEEEETTT-----TEEEEEEECTTSCEEE
T ss_pred CcEEEEeCCC-----CEEEEEEECCCCcEEE
Confidence 5566654322 468999987 555544
No 39
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.05 E-value=0.28 Score=48.27 Aligned_cols=187 Identities=17% Similarity=0.157 Sum_probs=96.2
Q ss_pred ECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 91 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 91 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
..+..++.|+.+ ..+.+||+.++.-...-. . ......++.+++..++.|+.+ ..+.+||+.+.
T Consensus 207 ~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~--~---~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~ 269 (445)
T 2ovr_B 207 LHEKRVVSGSRD------ATLRVWDIETGQCLHVLM--G---HVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETE 269 (445)
T ss_dssp EETTEEEEEETT------SEEEEEESSSCCEEEEEE--C---CSSCEEEEEECSSCEEEEETT------SCEEEEEGGGT
T ss_pred ecCCEEEEEeCC------CEEEEEECCCCcEEEEEc--C---CcccEEEEEECCCEEEEEcCC------CEEEEEECCCC
Confidence 344455666543 348899988876433221 1 111223444577777777653 35889998776
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 250 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 250 (499)
+-...-. .......++.+++. .++.|+.+ +.+.+||+.+..-...- .+ ..........++..++
T Consensus 270 ~~~~~~~-----~~~~~v~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~-~~----~~~~v~~~~~~~~~l~ 333 (445)
T 2ovr_B 270 TCLHTLQ-----GHTNRVYSLQFDGI-HVVSGSLD-----TSIRVWDVETGNCIHTL-TG----HQSLTSGMELKDNILV 333 (445)
T ss_dssp EEEEEEC-----CCSSCEEEEEECSS-EEEEEETT-----SCEEEEETTTCCEEEEE-CC----CCSCEEEEEEETTEEE
T ss_pred cEeEEec-----CCCCceEEEEECCC-EEEEEeCC-----CeEEEEECCCCCEEEEE-cC----CcccEEEEEEeCCEEE
Confidence 5322211 11222333444455 56666654 35899998876533211 01 1111223333555666
Q ss_pred EeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
.|+.++ .+.+||+.+..-...-..+. .+......+..++ . +++.|+.++ .+.+||+...+
T Consensus 334 ~~~~dg-----~i~vwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~-~l~s~~~dg----~v~iwd~~~~~ 393 (445)
T 2ovr_B 334 SGNADS-----TVKIWDIKTGQCLQTLQGPN-----KHQSAVTCLQFNK-N-FVITSSDDG----TVKLWDLKTGE 393 (445)
T ss_dssp EEETTS-----CEEEEETTTCCEEEEECSTT-----SCSSCEEEEEECS-S-EEEEEETTS----EEEEEETTTCC
T ss_pred EEeCCC-----eEEEEECCCCcEEEEEccCC-----CCCCCEEEEEECC-C-EEEEEeCCC----eEEEEECCCCc
Confidence 666443 47889987765332211110 1112233334444 3 455676654 78888887653
No 40
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.04 E-value=0.1 Score=51.33 Aligned_cols=224 Identities=10% Similarity=0.050 Sum_probs=113.3
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
..++++|+....-..+.... .....+.+ +++.+++++.... ...++++|+.+++..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-------------------~~v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-------------------QPLMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGAVR 216 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-------------------SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEE
T ss_pred ceEEEEcCCCCCCEEEeCCC-------------------CcceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCcEE
Confidence 57899998765544443211 11122222 3444555554322 246999999999877
Q ss_pred EeecCCCCCCCCcceEEEEE--CC-EEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEE
Q 010847 123 VMETSGKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYL 198 (499)
Q Consensus 123 ~~~~~g~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l 198 (499)
.+. ..+. ...+..+ ++ .|++.+..+. ...++.+|+.+.+...+... . .......+ .++..
T Consensus 217 ~l~---~~~~---~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~-----~-~~~~~~~~spdg~~ 280 (415)
T 2hqs_A 217 QVA---SFPR---HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDG-----R-SNNTEPTWFPDSQN 280 (415)
T ss_dssp EEE---CCSS---CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCC-----S-SCEEEEEECTTSSE
T ss_pred Eee---cCCC---cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCC-----C-CcccceEECCCCCE
Confidence 665 2221 1222233 34 4655554332 34699999998877555321 1 11222333 34444
Q ss_pred EEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEec
Q 010847 199 IVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 199 ~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
+++++... ....+|.+|+.+..-..+.. ......+.+.. +++.+++++... ....++++|+.+.....+.
T Consensus 281 l~~~s~~~--g~~~i~~~d~~~~~~~~l~~-----~~~~~~~~~~spdG~~l~~~~~~~--g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 281 LAFTSDQA--GRPQVYKVNINGGAPQRITW-----EGSQNQDADVSSDGKFMVMVSSNG--GQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp EEEEECTT--SSCEEEEEETTSSCCEECCC-----SSSEEEEEEECTTSSEEEEEEECS--SCEEEEEEETTTCCEEECC
T ss_pred EEEEECCC--CCcEEEEEECCCCCEEEEec-----CCCcccCeEECCCCCEEEEEECcC--CceEEEEEECCCCCEEEec
Confidence 44444221 12479999998876554421 11111122222 445555544322 1347899999998876653
Q ss_pred cCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 278 SVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 278 ~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
... .........++ .+ +++++..+ ....+|++|+....
T Consensus 352 ~~~--------~~~~~~~spdg-~~-l~~~s~~~-~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 352 STF--------LDETPSLAPNG-TM-VIYSSSQG-MGSVLNLVSTDGRF 389 (415)
T ss_dssp CSS--------SCEEEEECTTS-SE-EEEEEEET-TEEEEEEEETTSCC
T ss_pred CCC--------CcCCeEEcCCC-CE-EEEEEcCC-CccEEEEEECCCCc
Confidence 321 11122222233 34 44444322 13478899986543
No 41
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.03 E-value=0.23 Score=46.81 Aligned_cols=226 Identities=11% Similarity=-0.047 Sum_probs=115.0
Q ss_pred cCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcE
Q 010847 44 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLC 121 (499)
Q Consensus 44 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 121 (499)
...++++|+.+++-...-... .. .+.++.. ++.+|+.++. ...+.+||+.+++-
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~-----------------~~-~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND-----------------LK-PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEV 123 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES-----------------SC-CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCE
T ss_pred CccEEEEcCCCCeEEEEEecC-----------------CC-cceEEECCCCCEEEEEecC------CCEEEEEeCCCCee
Confidence 457999999988754433321 11 1223332 4568877653 23599999998875
Q ss_pred EEeecCCCCCC-----CCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc
Q 010847 122 GVMETSGKVPV-----ARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA 194 (499)
Q Consensus 122 ~~~~~~g~~p~-----~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~ 194 (499)
......+.... +..-+.++.. ++.+|+.+... ...+++||+.+.+-...-.. ....-+.++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~s~ 194 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQN----TGKMSTGLALDS 194 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECC----CCTTCCCCEEET
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecC----CCCccceEEECC
Confidence 33322111111 1111223332 34677765221 24599999988765433220 111122333333
Q ss_pred -CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCC
Q 010847 195 -NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 195 -~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
++.+|+... .+.+++||+.+.+-......+.........+++.. ++.+|+.... .+.+++||+.+.
T Consensus 195 dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~ 263 (353)
T 3vgz_A 195 EGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNG 263 (353)
T ss_dssp TTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTC
T ss_pred CCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCC
Confidence 455666543 25789999988764332111111111122223333 3456666432 246899999887
Q ss_pred ceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 272 AWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 272 ~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
........+. + .......+..++|+.+..+ +.+.++|+...+
T Consensus 264 ~~~~~~~~~~--~-------~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~ 305 (353)
T 3vgz_A 264 NILAKVAAPE--S-------LAVLFNPARNEAYVTHRQA----GKVSVIDAKSYK 305 (353)
T ss_dssp CEEEEEECSS--C-------CCEEEETTTTEEEEEETTT----TEEEEEETTTTE
T ss_pred cEEEEEEcCC--C-------ceEEECCCCCEEEEEECCC----CeEEEEECCCCe
Confidence 7544332221 1 1122333345677765443 378889986543
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.02 E-value=0.21 Score=46.37 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=75.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++ .+.+||+.++.-...- +........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 118 ~~~~l~s~~~d~------~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~ 180 (312)
T 4ery_A 118 QSNLIVSGSFDE------SVRIWDVKTGKCLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDTAS 180 (312)
T ss_dssp SSSEEEEEETTS------CEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCEEEEEe-----cCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEECCC
Confidence 345666676543 3899999887643322 111111222333 45667777653 3589999987
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEE-ECCE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT-IDEN 247 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~ 247 (499)
.+....-... .......+.+ .++..++.|+.+ +.+.+||+.+..-...- .+............. .++.
T Consensus 181 ~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 181 GQCLKTLIDD----DNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp CCEEEEECCS----SCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSC
T ss_pred CceeeEEecc----CCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCc
Confidence 7643322111 1111122233 344456666543 46899999876533321 111111111122222 2456
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCce
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAW 273 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W 273 (499)
+++.|+.++ .+.+||+.+..-
T Consensus 251 ~l~sg~~dg-----~i~vwd~~~~~~ 271 (312)
T 4ery_A 251 WIVSGSEDN-----LVYIWNLQTKEI 271 (312)
T ss_dssp EEEECCTTS-----CEEEEETTTCCE
T ss_pred EEEEECCCC-----EEEEEECCCchh
Confidence 666666433 478889877653
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.01 E-value=0.075 Score=49.88 Aligned_cols=263 Identities=10% Similarity=-0.003 Sum_probs=123.0
Q ss_pred cccCCCCCeEEcccCC-CCCCccc---c-eEEEEcCCCCCcccCcEEEEEcCCCce-EEeeeCcccccCccccCCCCCCC
Q 010847 7 HLELPYDLWVTLPVSG-ARPSPRY---K-KLYIVGGSRNGRFLSDVQVFDLRSLAW-SNLRLETELDADKTEDSGLLEVL 80 (499)
Q Consensus 7 ~~~~~~~~W~~~~~~~-~~p~~r~---~-~l~~~GG~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~p 80 (499)
.+|+.+++....-..+ ..|.... + .||+.+... ..+++||+.++.. ....... .
T Consensus 24 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~---------------~ 83 (331)
T 3u4y_A 24 FFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEG---------------Q 83 (331)
T ss_dssp EEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEEC---------------S
T ss_pred EEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEecccC---------------C
Confidence 4677777775433222 1111111 1 466665522 3689999998875 2222211 0
Q ss_pred CCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcCcCCCCCc
Q 010847 81 PPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKL 158 (499)
Q Consensus 81 ~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~ 158 (499)
.++.+.+...-++.|| .+..... ...+.+||+.++........+..| +.++.. ++ .||+.+..
T Consensus 84 ~~~~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~~spdg~~l~~~~~~------ 148 (331)
T 3u4y_A 84 SSMADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPYDA-----VGIAISPNGNGLILIDRS------ 148 (331)
T ss_dssp SCCCCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCTTE-----EEEEECTTSSCEEEEEET------
T ss_pred CCccceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCCCc-----cceEECCCCCEEEEEecC------
Confidence 1111122222245666 3322111 125999999988765543222211 333333 33 57776542
Q ss_pred cCc-EEEEECCCCe-eEEeeecCCCCCCCccceEEEEcCc-EEEEEcCCCCCCCCCcEEEEECCCCce---EecccCCCC
Q 010847 159 LND-VHFLDLETMT-WDAVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEW---SQPEIKGDL 232 (499)
Q Consensus 159 ~~~-v~~yd~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~~d~~~~~W---~~~~~~~~~ 232 (499)
.+. +.+|++.... ...... ...+....-..++...++ ++|+.+.. .+.+.+||+.+.+. ... .
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~-----~ 217 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQ-EFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNA-----V 217 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEE-EEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEE-----E
T ss_pred CCceEEEEEECCCCcEeecCC-ccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeee-----c
Confidence 234 7777765422 111100 001112222333333344 56766533 25699999987765 221 1
Q ss_pred CCcCcccEEEEE-CCE-EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCC---CCCCCCCceEEEEEcCceEEEEEc
Q 010847 233 VTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRN---PLASEGLSVCSAIIEGEHHLVAFG 307 (499)
Q Consensus 233 p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~---p~~~~~~~~~~~~~~~~~~l~v~G 307 (499)
+.......++.. +++ +|+.... .+.++++|+.+.....+...+... +.+...... .....+..+|++.+
T Consensus 218 ~~~~~~~~~~~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~spdg~~l~v~~ 291 (331)
T 3u4y_A 218 GTNNLPGTIVVSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQ-MALNKTETKLFISA 291 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEEECSS-----EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCC-EEECTTSSEEEEEE
T ss_pred cCCCCCceEEECCCCCEEEEEEcC-----CCEEEEEECCCCceeeecccccccccCCCCcccccc-eEECCCCCEEEEec
Confidence 111111223333 334 6665431 235889999988875554332211 111111111 22233345677766
Q ss_pred CCCCCCCceEEEEECCCC
Q 010847 308 GYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 308 G~~~~~~~~~~~~~~~~~ 325 (499)
+..+ .+.+||+...
T Consensus 292 ~~~~----~v~v~d~~~~ 305 (331)
T 3u4y_A 292 NISR----ELKVFTISGK 305 (331)
T ss_dssp TTTT----EEEEEETTSC
T ss_pred CCCC----cEEEEEecCC
Confidence 5433 7888998654
No 44
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.00 E-value=0.12 Score=50.94 Aligned_cols=182 Identities=14% Similarity=0.193 Sum_probs=93.4
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.+++.|+.+ ..+.+||+.++.-...-.. ......++...+..++.|+.++ .
T Consensus 184 ~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~------------------h~~~v~~l~~~~~~l~s~s~dg------~ 234 (435)
T 1p22_A 184 RVIITGSSD-----STVRVWDVNTGEMLNTLIH------------------HCEAVLHLRFNNGMMVTCSKDR------S 234 (435)
T ss_dssp SEEEEEETT-----SCEEEEESSSCCEEEEECC------------------CCSCEEEEECCTTEEEEEETTS------C
T ss_pred CEEEEEcCC-----CeEEEEECCCCcEEEEEcC------------------CCCcEEEEEEcCCEEEEeeCCC------c
Confidence 555555533 3588899988764332111 1122233344555666776533 3
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceE
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSA 190 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 190 (499)
+.+||+.+..-..... ..........++.+++..++.|+.+ ..+.+||+.+.+-...-. . ......+
T Consensus 235 i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~--~---~~~~v~~ 301 (435)
T 1p22_A 235 IAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRTLN--G---HKRGIAC 301 (435)
T ss_dssp EEEEECSSSSCCEEEE--EECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTTCCEEEEEE--C---CSSCEEE
T ss_pred EEEEeCCCCCCceeee--EecCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEEEc--C---CCCcEEE
Confidence 8889987765321110 0111112223334455566666543 358999998765432221 1 1122334
Q ss_pred EEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 191 ALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 191 ~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
+.++++ +++.|+.+ +.+.+||+.++.-...- .+ ....-.++..++..++.|+.++ .+.+||+.+
T Consensus 302 ~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~~~~~-~~----h~~~v~~~~~~~~~l~sg~~dg-----~i~vwd~~~ 365 (435)
T 1p22_A 302 LQYRDR-LVVSGSSD-----NTIRLWDIECGACLRVL-EG----HEELVRCIRFDNKRIVSGAYDG-----KIKVWDLVA 365 (435)
T ss_dssp EEEETT-EEEEEETT-----SCEEEEETTTCCEEEEE-CC----CSSCEEEEECCSSEEEEEETTS-----CEEEEEHHH
T ss_pred EEeCCC-EEEEEeCC-----CeEEEEECCCCCEEEEE-eC----CcCcEEEEEecCCEEEEEeCCC-----cEEEEECCC
Confidence 445555 66666654 36899999876533211 01 1111223344777777777543 467777644
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.98 E-value=0.091 Score=50.04 Aligned_cols=148 Identities=10% Similarity=0.099 Sum_probs=77.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.++++|+.+ ..+.+||+.++.|..+...... ...-.+++.. ++.+++.|+.++
T Consensus 21 ~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~l~~~~~dg------ 74 (372)
T 1k8k_C 21 TQIAICPNN-----HEVHIYEKSGNKWVQVHELKEH---------------NGQVTGVDWAPDSNRIVTCGTDR------ 74 (372)
T ss_dssp SEEEEECSS-----SEEEEEEEETTEEEEEEEEECC---------------SSCEEEEEEETTTTEEEEEETTS------
T ss_pred CEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCC---------------CCcccEEEEeCCCCEEEEEcCCC------
Confidence 667777643 3589999999987766654321 1111222222 455666666432
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCe-eEEeeecCCCCCCCc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAPRY 186 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p~~r~ 186 (499)
.+.+||+.++.+..... .........++.+ ++.+++.|+.+ ..+.+||+.+.. |...... ..+....
T Consensus 75 ~i~vwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~-~~~~~~~ 144 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLV---ILRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHI-KKPIRST 144 (372)
T ss_dssp CEEEEEEETTEEEEEEE---CCCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEE-CTTCCSC
T ss_pred eEEEEECCCCeeeeeEE---eecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeee-ecccCCC
Confidence 38889998888766542 1111112223333 45566666643 346777665543 3333221 1111111
Q ss_pred cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECC
Q 010847 187 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ 219 (499)
Q Consensus 187 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~ 219 (499)
-.++....++.+++.|+.+ ..+.+||+.
T Consensus 145 i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~ 172 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCD-----FKCRIFSAY 172 (372)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEECC
T ss_pred eeEEEEcCCCCEEEEEcCC-----CCEEEEEcc
Confidence 2222333345467777654 358888864
No 46
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.03 Score=59.93 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=61.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--C--CEEEEEcccCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--G--TKLLILGGHYKKSS 106 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~--~~iyv~GG~~~~~~ 106 (499)
.+++.||.+ ..+.+||..++++..+..... ......++.+ . +.+++.|+.++
T Consensus 22 ~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~----------------h~~~V~~l~~s~~~~~~~l~s~s~Dg--- 77 (753)
T 3jro_A 22 KRLATCSSD-----KTIKIFEVEGETHKLIDTLTG----------------HEGPVWRVDWAHPKFGTILASCSYDG--- 77 (753)
T ss_dssp CCEEEEETT-----TEEEEEEEETTEEEEEEEECC----------------CSSCEEEEEECCTTSCSEEEEEETTS---
T ss_pred CeEEEEECC-----CcEEEEecCCCCCccceeccC----------------CcCceEEEEecCCCCCCEEEEEeCCC---
Confidence 556666643 358889988888877765532 1222233333 2 56677777543
Q ss_pred CCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 107 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 107 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
.+.+||+.++.|..+... ........++.+ + +.+++.|+.+ ..+.+||+.+.
T Consensus 78 ---~I~vwd~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~ 133 (753)
T 3jro_A 78 ---KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 133 (753)
T ss_dssp ---CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSS
T ss_pred ---eEEEEECCCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecC
Confidence 388999999988776532 211222233333 2 5677777653 35888888765
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.89 E-value=0.15 Score=49.64 Aligned_cols=220 Identities=11% Similarity=0.084 Sum_probs=105.0
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEee
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVME 125 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 125 (499)
.+.+||+.++.....-.. ......++..++.+++.|+.+ ..+.+||+.+..-....
T Consensus 157 ~i~iwd~~~~~~~~~~~~------------------~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAG------------------HQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGT 212 (401)
T ss_dssp CEEEEETTTCCEEEEECC------------------CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEE
T ss_pred eEEEEECcCCeEEEEecC------------------CCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeE
Confidence 578888887754332211 112223334456667777653 34889998744322221
Q ss_pred cCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc-CcEEEEEc
Q 010847 126 TSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFG 202 (499)
Q Consensus 126 ~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~G 202 (499)
.. ... ....++.+ ++.+++.|+.+ +.+.+||+.+..-...-. . ....-.+++... +..+++.|
T Consensus 213 ~~-~~~---~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~--~--~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 213 LQ-GHS---SEVCGLAWRSDGLQLASGGND------NVVQIWDARSSIPKFTKT--N--HNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp EE-CCS---SCEEEEEECTTSSEEEEEETT------SCEEEEETTCSSEEEEEC--C--CSSCCCEEEECTTSTTEEEEE
T ss_pred Ec-CCC---CCeeEEEEcCCCCEEEEEeCC------CeEEEccCCCCCccEEec--C--CcceEEEEEECCCCCCEEEEe
Confidence 11 111 11222223 45677777653 358999998754332211 1 111112222222 33467766
Q ss_pred CCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CC-EEEEEeCCCCCCCcceEEEEECCCCceEEeccCC
Q 010847 203 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~ 280 (499)
|.. .-..+.+||+.+......-. . ...-.+++.. ++ .+++.+|..+. .+.+||+.+.....+..+.
T Consensus 279 ~gs---~d~~i~i~d~~~~~~~~~~~-~----~~~v~~~~~s~~~~~l~~~~g~~dg----~i~v~~~~~~~~~~~~~~~ 346 (401)
T 4aez_A 279 GGT---MDKQIHFWNAATGARVNTVD-A----GSQVTSLIWSPHSKEIMSTHGFPDN----NLSIWSYSSSGLTKQVDIP 346 (401)
T ss_dssp CCT---TTCEEEEEETTTCCEEEEEE-C----SSCEEEEEECSSSSEEEEEECTTTC----EEEEEEEETTEEEEEEEEE
T ss_pred cCC---CCCEEEEEECCCCCEEEEEe-C----CCcEEEEEECCCCCeEEEEeecCCC----cEEEEecCCccceeEEEec
Confidence 421 12469999988765433211 1 1111122222 33 44444453322 5788888877666543332
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 281 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 281 ~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
... .....+....+..+++.||.++ .+.++++...
T Consensus 347 ~h~------~~v~~~~~s~dg~~l~s~~~dg----~i~iw~~~~~ 381 (401)
T 4aez_A 347 AHD------TRVLYSALSPDGRILSTAASDE----NLKFWRVYDG 381 (401)
T ss_dssp CCS------SCCCEEEECTTSSEEEEECTTS----EEEEEECCC-
T ss_pred CCC------CCEEEEEECCCCCEEEEEeCCC----cEEEEECCCC
Confidence 211 1111222322223455566654 6888888654
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.85 E-value=0.32 Score=45.74 Aligned_cols=196 Identities=11% Similarity=0.054 Sum_probs=100.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCC--CCCccceeEEEE--CCEEEEEcccCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEV--LPPMSDHCMVKW--GTKLLILGGHYKKSS 106 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~s~~~~--~~~iyv~GG~~~~~~ 106 (499)
.+|+.++.+ +.+.+||+.+++-...-..... ..+ ..+..-+.++.. ++.+|+.+...
T Consensus 102 ~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 162 (353)
T 3vgz_A 102 TLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDR----------KRTEEVRPLQPRELVADDATNTVYISGIGK---- 162 (353)
T ss_dssp EEEEEETTT-----TEEEEEETTTCCEEEEEESCCC----------CCCSSCCCCEEEEEEEETTTTEEEEEEESS----
T ss_pred EEEEEecCC-----CEEEEEeCCCCeeEEEEecCCC----------ccccccCCCCCceEEECCCCCEEEEEecCC----
Confidence 577666532 3689999998875433322110 000 001112233332 46677766321
Q ss_pred CCceEEEEECCCCcEEEeec-CCCCCCCCcceEEEE--ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCC
Q 010847 107 DSMIVRFIDLETNLCGVMET-SGKVPVARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 183 (499)
Q Consensus 107 ~~~~~~~yd~~t~~W~~~~~-~g~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~ 183 (499)
...++++|+.+++-..... .+..| +.++. .++.||+... .+.+++||+.+.+-......+...
T Consensus 163 -~~~i~~~d~~~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~- 228 (353)
T 3vgz_A 163 -ESVIWVVDGGNIKLKTAIQNTGKMS-----TGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDG- 228 (353)
T ss_dssp -SCEEEEEETTTTEEEEEECCCCTTC-----CCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSS-
T ss_pred -CceEEEEcCCCCceEEEecCCCCcc-----ceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCC-
Confidence 2349999999886544331 11111 22222 2346776543 246889999887654333222111
Q ss_pred CCccc-eEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCC
Q 010847 184 PRYDH-SAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG 259 (499)
Q Consensus 184 ~r~~~-~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~ 259 (499)
+.... .++... ++.+|+.+.. .+.+++||+.+.+....-. .+.+ ..++.. ++.+|+.+..+
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~---~~~~---~~~~~s~dg~~l~v~~~~~---- 293 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVA---APES---LAVLFNPARNEAYVTHRQA---- 293 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEE---CSSC---CCEEEETTTTEEEEEETTT----
T ss_pred CCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEE---cCCC---ceEEECCCCCEEEEEECCC----
Confidence 12222 233333 4556665432 3579999998877544211 1222 123333 34577765422
Q ss_pred cceEEEEECCCCceEE
Q 010847 260 CQETIVLNMTKLAWSI 275 (499)
Q Consensus 260 ~~~~~~~d~~~~~W~~ 275 (499)
+.+.++|+.+.....
T Consensus 294 -~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 294 -GKVSVIDAKSYKVVK 308 (353)
T ss_dssp -TEEEEEETTTTEEEE
T ss_pred -CeEEEEECCCCeEEE
Confidence 368999998876544
No 49
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.84 E-value=0.097 Score=47.69 Aligned_cols=229 Identities=9% Similarity=0.006 Sum_probs=111.6
Q ss_pred cCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCC-CcE
Q 010847 44 LSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLET-NLC 121 (499)
Q Consensus 44 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W 121 (499)
...++++|+.++....+.... .. -.+++.. +++.+++++ ...++++|+.+ +..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----------------~~-v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~ 75 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----------------EL-FEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPSP 75 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----------------SC-CEEEEECTTSSEEEEEE-------TTEEEEEESSSCCSC
T ss_pred ceeEEEEeCCCCceeeeccCC-----------------cc-eEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCCc
Confidence 457999999998877654421 11 1122221 445555554 23599999998 776
Q ss_pred EEeecCCCCCC-CCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc-CcEEE
Q 010847 122 GVMETSGKVPV-ARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLI 199 (499)
Q Consensus 122 ~~~~~~g~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~ 199 (499)
..+. ..+. .........-+++.+++++.... ....++.+++.+.....+... .. ...+.... +..|+
T Consensus 76 ~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~----~~--~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 76 EKVD---TGFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKN----LP--SYWHGWSPDGKSFT 144 (297)
T ss_dssp EECC---CTTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSS----SS--EEEEEECTTSSEEE
T ss_pred eEec---cccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecC----CC--ccceEECCCCCEEE
Confidence 6554 2221 11111222234555555543222 245789999887765544321 11 22222333 34455
Q ss_pred EEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEecc
Q 010847 200 VFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 278 (499)
Q Consensus 200 v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~ 278 (499)
+.++.++ ...+|.+|+.+.....+.. .+ .....++.. ++..+++++... ....+|.+++.......+..
T Consensus 145 ~~~~~~~---~~~l~~~~~~~~~~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 145 YCGIRDQ---VFDIYSMDIDSGVETRLTH---GE--GRNDGPDYSPDGRWIYFNSSRT--GQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEEEETT---EEEEEEEETTTCCEEECCC---SS--SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCEEECCC
T ss_pred EEECCCC---ceEEEEEECCCCcceEccc---CC--CccccceECCCCCEEEEEecCC--CCccEEEECCCCCCcEEEec
Confidence 4444322 1367888887776655421 11 111122222 344444433211 23478888887777665543
Q ss_pred CCCCCCCCCCCCceEEEEE-cCceEEEEEcCCCCC------CCceEEEEECCCCCC
Q 010847 279 VKGRNPLASEGLSVCSAII-EGEHHLVAFGGYNGK------YNNEVFVMRLKPRDI 327 (499)
Q Consensus 279 ~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~~~~------~~~~~~~~~~~~~~W 327 (499)
.. .....+.. .+..+|++.+...+. ....++++|+.....
T Consensus 215 ~~---------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 215 SA---------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CS---------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CC---------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 21 11222222 233444443322111 224689999876543
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.83 E-value=0.21 Score=47.19 Aligned_cols=234 Identities=14% Similarity=0.134 Sum_probs=109.4
Q ss_pred CccccCCCCCeEEcccCC--CCCCc----ccceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCC
Q 010847 5 SWHLELPYDLWVTLPVSG--ARPSP----RYKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLE 78 (499)
Q Consensus 5 ~~~~~~~~~~W~~~~~~~--~~p~~----r~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ 78 (499)
.|.+|+.++++..+.... ..|.. ..++||+.+... ....+++||+.+++++.+......
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~------------ 84 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAP------------ 84 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEE------------
T ss_pred EEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecC------------
Confidence 577888888887643211 12211 123677665321 124689999988888776653210
Q ss_pred CCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECC-CCcEEEee---cCCCCCCCCc----ceEEEE-ECCEEE
Q 010847 79 VLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLE-TNLCGVME---TSGKVPVARG----GHSVTL-VGSRLI 147 (499)
Q Consensus 79 ~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~---~~g~~p~~r~----~~~~~~-~~~~ly 147 (499)
...-..++.. +..||+.+.. ...+.+||+. ++....+. ..+..|.+|. -++++. -++++|
T Consensus 85 ---~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~ 155 (347)
T 3hfq_A 85 ---GTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA 155 (347)
T ss_dssp ---SCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE
T ss_pred ---CCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE
Confidence 1111222222 4457766532 2347778874 34444333 1222222111 122222 245677
Q ss_pred EEcCcCCCCCccCcEEEEECC-CCeeEEeeecCCCCCCCccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECC--CCce
Q 010847 148 IFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQ--TNEW 223 (499)
Q Consensus 148 v~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~--~~~W 223 (499)
+.+.. .+.+.+|++. +.+...+.... .+....-..++...+ +++|+.+..+ +.+.+|++. ++.+
T Consensus 156 v~~~~------~~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 156 VIDLG------SDKVYVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAF 223 (347)
T ss_dssp EEETT------TTEEEEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEE
T ss_pred EEeCC------CCEEEEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCce
Confidence 65432 3468999987 56555443211 111111112333334 4577755432 345556544 5666
Q ss_pred EecccCCCCCCc---CcccEEEEE--CC-EEEEEeCCCCCCCcceEEEEECC-CCceEEeccC
Q 010847 224 SQPEIKGDLVTG---RAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSV 279 (499)
Q Consensus 224 ~~~~~~~~~p~~---r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~~-~~~W~~l~~~ 279 (499)
..+......+.. ......+.+ ++ .+|+.+.. .+.+.+||+. .+.+..+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-----~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-----YNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-----TTEEEEEEECGGGCEEEEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-----CCEEEEEEECCCCcEEEeEEE
Confidence 543321222221 112222333 33 46666542 2357788875 3345554433
No 51
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.82 E-value=0.057 Score=53.09 Aligned_cols=199 Identities=10% Similarity=0.003 Sum_probs=105.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE---CCEEEEEcccCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~---~~~iyv~GG~~~~~~~ 107 (499)
+.+++++.+++ ...++++|+.+++...+.... . ....+.+ +..|++.+...+
T Consensus 191 ~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~------------------~-~~~~~~~spdg~~la~~~~~~g---- 245 (415)
T 2hqs_A 191 SKLAYVTFESG--RSALVIQTLANGAVRQVASFP------------------R-HNGAPAFSPDGSKLAFALSKTG---- 245 (415)
T ss_dssp SEEEEEECTTS--SCEEEEEETTTCCEEEEECCS------------------S-CEEEEEECTTSSEEEEEECTTS----
T ss_pred CEEEEEEecCC--CcEEEEEECCCCcEEEeecCC------------------C-cccCEEEcCCCCEEEEEEecCC----
Confidence 44455544322 247899999998876554321 1 1222233 345665554332
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
...++.+|+.++....+. ..+. ......+ +++.+++++... ....++.+|+.+..-..+... ..
T Consensus 246 ~~~i~~~d~~~~~~~~l~---~~~~---~~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~-----~~ 311 (415)
T 2hqs_A 246 SLNLYVMDLASGQIRQVT---DGRS---NNTEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWE-----GS 311 (415)
T ss_dssp SCEEEEEETTTCCEEECC---CCSS---CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCS-----SS
T ss_pred CceEEEEECCCCCEEeCc---CCCC---cccceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecC-----CC
Confidence 345999999998876554 2111 1222233 444444433211 134699999988775444321 11
Q ss_pred ccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEE
Q 010847 186 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETI 264 (499)
Q Consensus 186 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~ 264 (499)
....++...++..+++++.... ...++++|+.+.....+.. . . ...+.+.. ++..+++++.+.. ...++
T Consensus 312 ~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~--~---~-~~~~~~~spdg~~l~~~s~~~~--~~~l~ 381 (415)
T 2hqs_A 312 QNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSS--T---F-LDETPSLAPNGTMVIYSSSQGM--GSVLN 381 (415)
T ss_dssp EEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCC--S---S-SCEEEEECTTSSEEEEEEEETT--EEEEE
T ss_pred cccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecC--C---C-CcCCeEEcCCCCEEEEEEcCCC--ccEEE
Confidence 2222222234434555443211 3479999999988766532 1 1 12222222 4566666653322 34789
Q ss_pred EEECCCCceEEecc
Q 010847 265 VLNMTKLAWSILTS 278 (499)
Q Consensus 265 ~~d~~~~~W~~l~~ 278 (499)
++|+.......++.
T Consensus 382 ~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 382 LVSTDGRFKARLPA 395 (415)
T ss_dssp EEETTSCCEEECCC
T ss_pred EEECCCCcEEEeeC
Confidence 99998877776654
No 52
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.82 E-value=0.091 Score=56.35 Aligned_cols=217 Identities=9% Similarity=0.010 Sum_probs=118.1
Q ss_pred CCccccCCCCCeEEcccCCCCCCcc--------cceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCC
Q 010847 4 GSWHLELPYDLWVTLPVSGARPSPR--------YKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSG 75 (499)
Q Consensus 4 ~~~~~~~~~~~W~~~~~~~~~p~~r--------~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~ 75 (499)
+-+.||+.++++..++..+ .+... .+.|++- . .+.+++||+.++.|........
T Consensus 428 Gl~~~~~~~~~~~~~~~~~-~~~~~v~~i~~d~~g~lwig-t------~~Gl~~~~~~~~~~~~~~~~~~---------- 489 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEK-NELLDVRVFYEDKNKKIWIG-T------HAGVFVIDLASKKVIHHYDTSN---------- 489 (781)
T ss_dssp EEEEECSSSCEEEECCSTT-TCCCCEEEEEECTTSEEEEE-E------TTEEEEEESSSSSCCEEECTTT----------
T ss_pred CEEEEcCCCCcEEEeccCC-CCCCeEEEEEECCCCCEEEE-E------CCceEEEeCCCCeEEecccCcc----------
Confidence 3467888888888776321 11111 1133332 1 1468999999999987754321
Q ss_pred CCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcC
Q 010847 76 LLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGED 153 (499)
Q Consensus 76 ~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~ 153 (499)
...+... -.+++.. ++.|++.. .. ..+++||+.++.+........+|.... .+++. -++.|++...
T Consensus 490 -~~~~~~~-i~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-- 557 (781)
T 3v9f_A 490 -SQLLENF-VRSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-- 557 (781)
T ss_dssp -SSCSCSC-EEEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--
T ss_pred -cccccce-eEEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--
Confidence 0001111 1222222 46677643 11 129999999999988764222332211 12222 2467777532
Q ss_pred CCCCccCcE-EEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCC
Q 010847 154 RSRKLLNDV-HFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL 232 (499)
Q Consensus 154 ~~~~~~~~v-~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~ 232 (499)
+.+ ++||+.+.++........+|... ..+++...++.|++.+. +-+.+||+.+.++........+
T Consensus 558 ------~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl 623 (781)
T 3v9f_A 558 ------EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNI 623 (781)
T ss_dssp ------TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTC
T ss_pred ------CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCc
Confidence 236 88999988887776543344333 23444444666777542 3589999999988886543334
Q ss_pred CCcCccc-EEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 233 VTGRAGH-AGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 233 p~~r~~~-~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
+...+.. +++...+..+.|||.+ -+..||+..
T Consensus 624 ~~~~f~~~~~~~~~~G~l~~g~~~------Gl~~f~p~~ 656 (781)
T 3v9f_A 624 PQGSFISGCVTKDHNGLIYFGSIN------GLCFFNPDI 656 (781)
T ss_dssp CSSCEEEEEEEECTTSCEEEEETT------EEEEECSCC
T ss_pred cccccccCceEECCCCEEEEECCC------ceEEEChhh
Confidence 4443332 3333334445556633 255666643
No 53
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.81 E-value=0.65 Score=48.77 Aligned_cols=195 Identities=13% Similarity=-0.002 Sum_probs=94.6
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCC-eeEEeeecCCCCCC
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAP 184 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~p~~ 184 (499)
...++++|+.++.-..+.. ..........+.+ +++.++++..+... ....++.+|+.+. ....+..... +..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KHY 308 (706)
T ss_dssp EEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SSC
T ss_pred eeEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CCe
Confidence 3569999999887655531 1111112222333 44434443333221 2457999999988 7766643111 100
Q ss_pred C-ccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CC-EEEEEeCCCCCC
Q 010847 185 R-YDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DE-NWYIVGGGDNNN 258 (499)
Q Consensus 185 r-~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~ 258 (499)
. ....++... ++.+++.+..++ ...+|.+|........+.. +. ........+ ++ .+++.+. ....
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~-~~----~~v~~~~~~spdg~~l~~~~~-~~~~ 379 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTK-GE----WEVTNFAGFDPKGTRLYFEST-EASP 379 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCC-SS----SCEEEEEEECTTSSEEEEEES-SSCT
T ss_pred ECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCC-CC----eEEEeeeEEcCCCCEEEEEec-CCCC
Confidence 0 011223334 555555554332 3578888877766666531 11 111121223 33 4555443 3322
Q ss_pred CcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 259 GCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 259 ~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
....+|.+|+.+.....+.... +........++ .+| ++..........++++|+....
T Consensus 380 ~~~~l~~~d~~~~~~~~l~~~~--------~~~~~~~spdg-~~l-~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGGKTKDLTPES--------GMHRTQLSPDG-SAI-IDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCCCCEESCCSS--------SEEEEEECTTS-SEE-EEEEECSSCSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCCCceeccCCC--------ceEEEEECCCC-CEE-EEEecCCCCCcEEEEEECCCCe
Confidence 2457899999887766654211 11112222233 333 3333333334568888876543
No 54
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.79 E-value=0.3 Score=52.40 Aligned_cols=188 Identities=9% Similarity=-0.012 Sum_probs=102.3
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
..+++||+.++.+....... .. .+...-.+++.. ++.|++... . .+++||+.++.|..
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~------------~~-l~~~~v~~i~~d~~g~lwigt~-~-------Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRN------------SQ-LVNENVYAILPDGEGNLWLGTL-S-------ALVRFNPEQRSFTT 485 (795)
T ss_dssp TEEEEEETTTCCEEEECTTT------------SC-CSCSCEEEEEECSSSCEEEEES-S-------CEEEEETTTTEEEE
T ss_pred CceeEEeCCCCcEEEeecCC------------CC-cCCCeeEEEEECCCCCEEEEec-C-------ceeEEeCCCCeEEE
Confidence 35899999999988775421 00 111112222222 466776432 1 29999999999988
Q ss_pred eecCCCCCCCC--cceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCC-CC-CccceEEEEcCcE
Q 010847 124 METSGKVPVAR--GGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP-AP-RYDHSAALHANRY 197 (499)
Q Consensus 124 ~~~~g~~p~~r--~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p-~~-r~~~~~~~~~~~~ 197 (499)
..... .+... ....++.. ++.|++... +.+++||+.+..+ ........+ .+ ..-.+++...++.
T Consensus 486 ~~~~~-~~~~~~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~ 555 (795)
T 4a2l_A 486 IEKEK-DGTPVVSKQITTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGI 555 (795)
T ss_dssp CCBCT-TCCBCCCCCEEEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSC
T ss_pred ccccc-cccccCCceEEEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCC
Confidence 75321 11111 11112222 457777432 2489999988888 443110001 11 1112222224565
Q ss_pred EEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEe
Q 010847 198 LIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 276 (499)
Q Consensus 198 l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l 276 (499)
|++... +-+++||+.+.++........+|... ..+++.. ++.+++.+. +-+.+||+.+..+...
T Consensus 556 lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 556 IWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-------RGISCFNPETEKFRNF 620 (795)
T ss_dssp EEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-------TEEEEEETTTTEEEEE
T ss_pred EEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEc
Confidence 666432 24899999999888764433344332 2233332 356776542 2478999999988766
Q ss_pred cc
Q 010847 277 TS 278 (499)
Q Consensus 277 ~~ 278 (499)
..
T Consensus 621 ~~ 622 (795)
T 4a2l_A 621 TE 622 (795)
T ss_dssp CG
T ss_pred CC
Confidence 43
No 55
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.76 E-value=0.18 Score=47.20 Aligned_cols=236 Identities=11% Similarity=0.033 Sum_probs=105.6
Q ss_pred CcEEEEEcC--CCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCc
Q 010847 45 SDVQVFDLR--SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNL 120 (499)
Q Consensus 45 ~~~~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 120 (499)
..+.+|++. ++++..+...... . .-..++.. ++.||+.+.. ...+.+||+..+.
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~ 117 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALP---------------G-SLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGL 117 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECS---------------S-CCSEEEECTTSSEEEEEETT------TTEEEEEEEETTE
T ss_pred CeEEEEEecCCCCceeeccccccC---------------C-CCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCc
Confidence 357777766 7888776554210 1 11222222 3456665432 2347888874332
Q ss_pred -EEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC-CeeEEee--ecCCCCCCCccceEEEEc
Q 010847 121 -CGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET-MTWDAVE--VTQTPPAPRYDHSAALHA 194 (499)
Q Consensus 121 -W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~--~~~~~p~~r~~~~~~~~~ 194 (499)
...+......+ .-+.++.. +..||+.+.. .+.+.+||+.+ .+...+. .. ..+....-..++...
T Consensus 118 ~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p 187 (343)
T 1ri6_A 118 PVGVVDVVEGLD---GCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHP 187 (343)
T ss_dssp EEEEEEEECCCT---TBCCCEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECT
T ss_pred cccccccccCCC---CceEEEECCCCCEEEEecCC------CCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECC
Confidence 22222111111 12222222 3367665422 24689999987 6665433 11 111111111233333
Q ss_pred -CcEEEEEcCCCCCCCCCcEEEEECC--CCceEecccCCCCCCc---Cccc-EEEEE--CCEEEEEeCCCCCCCcceEEE
Q 010847 195 -NRYLIVFGGCSHSIFFNDLHVLDLQ--TNEWSQPEIKGDLVTG---RAGH-AGITI--DENWYIVGGGDNNNGCQETIV 265 (499)
Q Consensus 195 -~~~l~v~GG~~~~~~~~~i~~~d~~--~~~W~~~~~~~~~p~~---r~~~-~~~~~--~~~l~v~GG~~~~~~~~~~~~ 265 (499)
+.++|+.+.. .+.+.+||+. +..+..+......+.. .... .++.. +..+|+.+..+ ..+.+
T Consensus 188 dg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v 257 (343)
T 1ri6_A 188 NEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITV 257 (343)
T ss_dssp TSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEE
T ss_pred CCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEE
Confidence 3456666533 2468899884 4444332211112221 1112 23332 23566555322 35778
Q ss_pred EECC--CCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCCCCC
Q 010847 266 LNMT--KLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIPRP 330 (499)
Q Consensus 266 ~d~~--~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W~~~ 330 (499)
||+. +..+..+...+... .........+..+|++.++.++ .-.+|.+|.....+...
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~--~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPTET------QPRGFNVDHSGKYLIAAGQKSH--HISVYEIVGEQGLLHEK 316 (343)
T ss_dssp EEECTTSCCEEEEEEEECSS------SCCCEEECTTSSEEEEECTTTC--EEEEEEEETTTTEEEEE
T ss_pred EEEcCCCCceEEeeeecCCC------ccceEEECCCCCEEEEecCCCC--eEEEEEEcCCCceeeEc
Confidence 8876 55666554433211 1111222233456776554333 22344456656555443
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.75 E-value=0.35 Score=44.95 Aligned_cols=186 Identities=16% Similarity=0.053 Sum_probs=93.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++..++.|+.+ ..+.+||+.+........ ..........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCC
Confidence 35556666542 349999999887544431 1111111222222 45566666643 3589999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
.+....-. . .......+.+ .++..++.|+.+ ..+.+||+.+..-..... . ...-.+++.. ++.
T Consensus 173 ~~~~~~~~--~---~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~---~--~~~v~~~~~s~~~~ 237 (337)
T 1gxr_A 173 QTLVRQFQ--G---HTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHD---F--TSQIFSLGYCPTGE 237 (337)
T ss_dssp TEEEEEEC--C---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEE---C--SSCEEEEEECTTSS
T ss_pred Cceeeeee--c---ccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeec---C--CCceEEEEECCCCC
Confidence 76543321 1 1112222333 344466666643 468999988765433211 1 1111222322 455
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.+++|+.++ .+.+||+.+..-..+... ......+....+..+++.|+.++ .+.+||+...
T Consensus 238 ~l~~~~~~~-----~i~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~ 297 (337)
T 1gxr_A 238 WLAVGMESS-----NVEVLHVNKPDKYQLHLH---------ESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTS-----CEEEEETTSSCEEEECCC---------SSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC
T ss_pred EEEEEcCCC-----cEEEEECCCCCeEEEcCC---------ccceeEEEECCCCCEEEEecCCC----cEEEEECCCC
Confidence 666665332 488899887654333221 11222333333223455566554 6888887654
No 57
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.67 E-value=0.4 Score=44.41 Aligned_cols=227 Identities=14% Similarity=0.119 Sum_probs=111.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+++.|+.+ ..+.+||..++.....-.. .......+.+ ++.+++.|+.+
T Consensus 36 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~------------------h~~~v~~~~~~~~~~~l~s~~~d------ 86 (312)
T 4ery_A 36 EWLASSSAD-----KLIKIWGAYDGKFEKTISG------------------HKLGISDVAWSSDSNLLVSASDD------ 86 (312)
T ss_dssp SEEEEEETT-----SCEEEEETTTCCEEEEECC------------------CSSCEEEEEECTTSSEEEEEETT------
T ss_pred CEEEEeeCC-----CeEEEEeCCCcccchhhcc------------------CCCceEEEEEcCCCCEEEEECCC------
Confidence 455555533 2478889888776543221 1112222333 45666677643
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
..+.+||+.++.-...-. + . .....++.+ ++.+++.|+.+ ..+.+||+.+.+-...-. ....
T Consensus 87 ~~i~vwd~~~~~~~~~~~-~--~--~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~-----~~~~ 150 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLK-G--H--SNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLP-----AHSD 150 (312)
T ss_dssp SEEEEEETTTCCEEEEEE-C--C--SSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEEC-----CCSS
T ss_pred CEEEEEECCCCcEEEEEc-C--C--CCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEec-----CCCC
Confidence 348999998876433221 1 1 111122222 34566667654 358999998765432211 1111
Q ss_pred cceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceE
Q 010847 187 DHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQET 263 (499)
Q Consensus 187 ~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~ 263 (499)
....+.+ .++.+++.|+.+ ..+.+||+.+......-... . ......+.+ ++..++.|+.++ .+
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~~~~~d~-----~i 216 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDD--D--NPPVSFVKFSPNGKYILAATLDN-----TL 216 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCS--S--CCCEEEEEECTTSSEEEEEETTT-----EE
T ss_pred cEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEecc--C--CCceEEEEECCCCCEEEEEcCCC-----eE
Confidence 1222333 344467777654 35899998876543311001 0 011112222 445666665432 57
Q ss_pred EEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 264 IVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 264 ~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.+||+.+..-... +..... ... .........+ ..+++.|+.++ .+.++|+...
T Consensus 217 ~iwd~~~~~~~~~--~~~~~~-~~~-~~~~~~~~~~-~~~l~sg~~dg----~i~vwd~~~~ 269 (312)
T 4ery_A 217 KLWDYSKGKCLKT--YTGHKN-EKY-CIFANFSVTG-GKWIVSGSEDN----LVYIWNLQTK 269 (312)
T ss_dssp EEEETTTTEEEEE--ECSSCC-SSS-CCCEEEECSS-SCEEEECCTTS----CEEEEETTTC
T ss_pred EEEECCCCcEEEE--EEecCC-ceE-EEEEEEEeCC-CcEEEEECCCC----EEEEEECCCc
Confidence 8899887653322 111110 001 1111122223 34566677665 6888888654
No 58
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.64 E-value=0.22 Score=46.76 Aligned_cols=158 Identities=15% Similarity=0.077 Sum_probs=77.3
Q ss_pred ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCC
Q 010847 30 KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSD 107 (499)
Q Consensus 30 ~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~ 107 (499)
+.+|+.++. .+.+.++|+.+++....-..+. ....+.++.. ++.+|+.+..
T Consensus 11 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~~~v~~~~------ 63 (349)
T 1jmx_B 11 HEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPD----------------KFGPGTAMMAPDNRTAYVLNNH------ 63 (349)
T ss_dssp CEEEEEEET-----TTEEEEEETTTTEEEEEEECSS----------------CCSSCEEEECTTSSEEEEEETT------
T ss_pred CEEEEEeCC-----CCeEEEEECCCCcEEEEEecCC----------------CCCCceeEECCCCCEEEEEeCC------
Confidence 367777764 2468999999987654333211 0011223322 3467777632
Q ss_pred CceEEEEECCCCcEEEeecCCCCCC--CCcceEEEEE-CC-EEEEEcCc--CCCCC---ccCcEEEEECCCCeeEEeeec
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPV--ARGGHSVTLV-GS-RLIIFGGE--DRSRK---LLNDVHFLDLETMTWDAVEVT 178 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~--~r~~~~~~~~-~~-~lyv~GG~--~~~~~---~~~~v~~yd~~t~~W~~~~~~ 178 (499)
...+++||+.+++-......+..|. ...-+.++.. ++ .||+.+.. ..... ..+.+++||+.+++-......
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 143 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 143 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee
Confidence 2459999999887654332111111 1111222322 34 55554421 00000 125799999987432111111
Q ss_pred CCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 179 QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 179 ~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
... +..-.+++...++.+|+.++ +++++|+.+.+-.
T Consensus 144 ~~~--~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 144 FPM--PRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp EEC--CSSCCCEEECTTSCEEEESS--------SEEEECTTTCCEE
T ss_pred ccC--CCcccceeECCCCcEEEccC--------cEEEEeCCCCcee
Confidence 111 22223333334555666432 4889998776643
No 59
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.63 E-value=0.88 Score=47.78 Aligned_cols=124 Identities=14% Similarity=0.053 Sum_probs=69.1
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCC--CCC---CCcceEEEEECCEEEEEcCcCCCCCcc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGK--VPV---ARGGHSVTLVGSRLIIFGGEDRSRKLL 159 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~--~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~ 159 (499)
+.++.++.||+... ...++.+|..|++ |+.-..... .+. .....+.+..+++||+... .
T Consensus 72 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------d 137 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------D 137 (677)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------T
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------C
Confidence 34567999999865 2349999998874 876541100 000 0112344557888887632 2
Q ss_pred CcEEEEECCCCe--eEEeeecCCCCCC-CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEec
Q 010847 160 NDVHFLDLETMT--WDAVEVTQTPPAP-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 160 ~~v~~yd~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~ 226 (499)
..++++|..|++ |+.-... ..+.. ....+.++. ++.+|+..+.........++.||..+++ |+.-
T Consensus 138 g~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 469999998774 8754210 11111 111122333 6655553332222234579999998876 8764
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.60 E-value=0.58 Score=45.30 Aligned_cols=217 Identities=15% Similarity=0.117 Sum_probs=110.6
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
.+.+||..++......... ......++.+ ++.+++.|+.++ .+.+||+.++....
T Consensus 114 ~v~lw~~~~~~~~~~~~~~-----------------~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETD-----------------ESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLR 170 (401)
T ss_dssp EEEEEETTTCCEEEEEECC-----------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEE
T ss_pred eEEEeeCCCCcEeEeeecC-----------------CCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEE
Confidence 5899999998876655431 1112223333 455666666432 38999998876543
Q ss_pred eecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEc
Q 010847 124 METSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFG 202 (499)
Q Consensus 124 ~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~G 202 (499)
.- . .......++.+++.+++.|+.+ ..+.+||+.+..-......+ .......+.+ .++.+++.|
T Consensus 171 ~~---~--~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 171 TM---A--GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG----HSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EE---C--CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC----CSSCEEEEEECTTSSEEEEE
T ss_pred Ee---c--CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC----CCCCeeEEEEcCCCCEEEEE
Confidence 32 1 1112223344466677777653 36889998743321111111 1112222233 355567777
Q ss_pred CCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCC
Q 010847 203 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~ 280 (499)
+.+ +.+.+||+.+..-...- . .....-.+++.. +..+++.||+..+ ..+.+||+.+..-...-...
T Consensus 236 ~~d-----~~v~iwd~~~~~~~~~~--~--~~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~~~~~~~~~~ 303 (401)
T 4aez_A 236 GND-----NVVQIWDARSSIPKFTK--T--NHNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATGARVNTVDAG 303 (401)
T ss_dssp ETT-----SCEEEEETTCSSEEEEE--C--CCSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTCCEEEEEECS
T ss_pred eCC-----CeEEEccCCCCCccEEe--c--CCcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCCCEEEEEeCC
Confidence 654 36899998875433211 1 111112233333 3467777753222 25889998876543322111
Q ss_pred CCCCCCCCCCceEEEEE-cCceEEEEEcC-CCCCCCceEEEEECCCC
Q 010847 281 GRNPLASEGLSVCSAII-EGEHHLVAFGG-YNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 281 ~~~p~~~~~~~~~~~~~-~~~~~l~v~GG-~~~~~~~~~~~~~~~~~ 325 (499)
.....+.. .+...+++.+| .++ .+.+||+...
T Consensus 304 ---------~~v~~~~~s~~~~~l~~~~g~~dg----~i~v~~~~~~ 337 (401)
T 4aez_A 304 ---------SQVTSLIWSPHSKEIMSTHGFPDN----NLSIWSYSSS 337 (401)
T ss_dssp ---------SCEEEEEECSSSSEEEEEECTTTC----EEEEEEEETT
T ss_pred ---------CcEEEEEECCCCCeEEEEeecCCC----cEEEEecCCc
Confidence 11222333 33445665544 443 6777776553
No 61
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.56 E-value=0.5 Score=44.07 Aligned_cols=234 Identities=10% Similarity=-0.001 Sum_probs=114.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEE--ECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~--~~~~iyv~GG~~~~~~~~ 108 (499)
.+|+.++. -+.+.+||+.+++....-..+ ....+++. -++.+|+.+.. .
T Consensus 11 ~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~------~ 61 (331)
T 3u4y_A 11 FGIVVEQH-----LRRISFFSTDTLEILNQITLG------------------YDFVDTAITSDCSNVVVTSDF------C 61 (331)
T ss_dssp EEEEEEGG-----GTEEEEEETTTCCEEEEEECC------------------CCEEEEEECSSSCEEEEEEST------T
T ss_pred EEEEEecC-----CCeEEEEeCcccceeeeEEcc------------------CCcceEEEcCCCCEEEEEeCC------C
Confidence 66776653 246899999999886654432 11112222 23457776653 2
Q ss_pred ceEEEEECCCCcE-EEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 109 MIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 109 ~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
..++++|+.++.. ......+..| . ++++.. +..|| .+.... ....+++||+.+.+.......+.
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~--~--~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~----- 128 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSS--M--ADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPIPY----- 128 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSC--C--CCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEECCT-----
T ss_pred CeEEEEECCCCceeEEecccCCCC--c--cceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEECCC-----
Confidence 3599999998875 3222212222 1 212222 34566 332211 12279999999887655433222
Q ss_pred ccceEEEEcCc-EEEEEcCCCCCCCCCc-EEEEECCCCc-eEecccCCCCCCcCcccEEEEE-CC-EEEEEeCCCCCCCc
Q 010847 186 YDHSAALHANR-YLIVFGGCSHSIFFND-LHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-DE-NWYIVGGGDNNNGC 260 (499)
Q Consensus 186 ~~~~~~~~~~~-~l~v~GG~~~~~~~~~-i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~ 260 (499)
.-+.++...++ ++|+.+... +. +++|++.... ...... ...+.......++.. ++ .+|+.+.. .
T Consensus 129 ~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~-----~ 197 (331)
T 3u4y_A 129 DAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQ-EFISGGTRPFNITFTPDGNFAFVANLI-----G 197 (331)
T ss_dssp TEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEE-EEECSSSSEEEEEECTTSSEEEEEETT-----T
T ss_pred CccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCC-ccccCCCCccceEECCCCCEEEEEeCC-----C
Confidence 12344444444 567665432 35 7777765432 111100 001111111233333 33 46766542 2
Q ss_pred ceEEEEECCCCce-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCC
Q 010847 261 QETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 327 (499)
Q Consensus 261 ~~~~~~d~~~~~W-~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W 327 (499)
+.+.+||+.+... ..+..++... .........+..+||+.... .+.++++|+...+.
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~~~~------~~~~~~~spdg~~l~v~~~~----~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVGTNN------LPGTIVVSRDGSTVYVLTES----TVDVFNFNQLSGTL 255 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEECSS------CCCCEEECTTSSEEEEECSS----EEEEEEEETTTTEE
T ss_pred CeEEEEECCCCcccceeeeccCCC------CCceEEECCCCCEEEEEEcC----CCEEEEEECCCCce
Confidence 3688999987765 1111121110 11112223334567765542 23588899876544
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.37 E-value=0.71 Score=43.76 Aligned_cols=238 Identities=10% Similarity=0.052 Sum_probs=106.3
Q ss_pred CccccCCCCCeEEcccC-CCCCC-cc---cc-eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCC
Q 010847 5 SWHLELPYDLWVTLPVS-GARPS-PR---YK-KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLE 78 (499)
Q Consensus 5 ~~~~~~~~~~W~~~~~~-~~~p~-~r---~~-~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ 78 (499)
.|.+|+.++++..+... ...|. .. .+ .||+.+........-.+|.+|..++....+.....
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~------------- 97 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT------------- 97 (361)
T ss_dssp EEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-------------
T ss_pred EEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-------------
Confidence 46778888888766532 11221 01 12 56666553211112234556666688877655421
Q ss_pred CCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCc-EEE----eecCCCCCCC-----CcceEEEEE-CC-EE
Q 010847 79 VLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL-CGV----METSGKVPVA-----RGGHSVTLV-GS-RL 146 (499)
Q Consensus 79 ~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~----~~~~g~~p~~-----r~~~~~~~~-~~-~l 146 (499)
.....+.++.-++.||+.... ...+.+|++.+.. ... ....|..|.+ ..-|+++.. ++ .|
T Consensus 98 --~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 98 --MGADPCYLTTNGKNIVTANYS------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp --SSSCEEEEEECSSEEEEEETT------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred --CCCCcEEEEECCCEEEEEECC------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 011222233334456665421 2348888876432 111 1111222211 111333332 34 57
Q ss_pred EEEcCcCCCCCccCcEEEEECCCCe-------eEEe---eecCCCCCCCccceEEEEcCc-EEEEEcCCCCCCCCCcEEE
Q 010847 147 IIFGGEDRSRKLLNDVHFLDLETMT-------WDAV---EVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHV 215 (499)
Q Consensus 147 yv~GG~~~~~~~~~~v~~yd~~t~~-------W~~~---~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~ 215 (499)
|+.+.. .+.+++|++.... .... ... ..+....-..++...++ ++|+.+.. .+.+.+
T Consensus 170 ~~~~~~------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v 237 (361)
T 3scy_A 170 LADDLG------TDQIHKFNINPNANADNKEKFLTKGTPEAF-KVAPGSGPRHLIFNSDGKFAYLINEI-----GGTVIA 237 (361)
T ss_dssp EEEETT------TTEEEEEEECTTCCTTTCCCCEEEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETT-----TCEEEE
T ss_pred EEEeCC------CCEEEEEEEcCCCCcccccceeecccccce-ecCCCCCCeEEEEcCCCCEEEEEcCC-----CCeEEE
Confidence 765431 3457788766443 2111 100 11111111223333344 56665532 246889
Q ss_pred EECCCCceEecccCCCCCCcCcccEEEEE--CC-EEEEEeCCCCCCCcceEEEEEC--CCCceEEeccC
Q 010847 216 LDLQTNEWSQPEIKGDLVTGRAGHAGITI--DE-NWYIVGGGDNNNGCQETIVLNM--TKLAWSILTSV 279 (499)
Q Consensus 216 ~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~d~--~~~~W~~l~~~ 279 (499)
||+.++.+..+......+........+.+ ++ .+|+..... .+.+.+|++ .++.++.+...
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECTTTCCEEEEEEE
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcCCCCcEEEeeEe
Confidence 99887776554322222222222233333 33 455554320 123555554 56777666544
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.16 Score=48.34 Aligned_cols=193 Identities=12% Similarity=0.130 Sum_probs=98.1
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC----CEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++.+++.|+.++ .+.+||+....+..+.. +........++.+. +.+++.|+.+ ..+.+||+
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK------TIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEE
T ss_pred CCCEEEEEECCC------cEEEEecCCCcceeeeE---ecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEc
Confidence 355666666432 38888887766666542 11111222333332 5667777654 35899999
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEc-C--cEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCCCCCcCcccEEEE
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHA-N--RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAGHAGIT 243 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~-~--~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~ 243 (499)
.+..|..+..... ......++.+. + +.+++.|+.+ ..+.+||+.+..-.. ....+ ....-.+++.
T Consensus 87 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~---~~~~v~~~~~ 155 (379)
T 3jrp_A 87 ENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDA---HAIGVNSASW 155 (379)
T ss_dssp ETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEEC---CTTCEEEEEE
T ss_pred CCCceeEeeeecC---CCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecC---CCCceEEEEE
Confidence 9998877664321 22223333332 3 4466776654 368888887663211 11000 0111112222
Q ss_pred E--------------CCEEEEEeCCCCCCCcceEEEEECCCC--ceEEeccCCCCCCCCCCCCceEEEEEcCc---eEEE
Q 010847 244 I--------------DENWYIVGGGDNNNGCQETIVLNMTKL--AWSILTSVKGRNPLASEGLSVCSAIIEGE---HHLV 304 (499)
Q Consensus 244 ~--------------~~~l~v~GG~~~~~~~~~~~~~d~~~~--~W~~l~~~~~~~p~~~~~~~~~~~~~~~~---~~l~ 304 (499)
. ++.+++.|+.++ .+.+||+.+. .+..+..+... ......+....+ ..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH------SDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp CCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC------SSCEEEEEECCCCSSSEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecc------cCcEeEEEECCCCCCCCeE
Confidence 2 356777776543 3677776543 35444333211 112233333333 4566
Q ss_pred EEcCCCCCCCceEEEEECCCC
Q 010847 305 AFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 305 v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+.|+.++ .+.+||+...
T Consensus 225 ~s~~~dg----~i~iwd~~~~ 241 (379)
T 3jrp_A 225 ASVSQDR----TCIIWTQDNE 241 (379)
T ss_dssp EEEETTS----CEEEEEESST
T ss_pred EEEeCCC----EEEEEeCCCC
Confidence 6677665 5777777654
No 64
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.25 Score=47.77 Aligned_cols=146 Identities=12% Similarity=0.044 Sum_probs=71.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
.+..++.|+.+ ..+.+||+.+..-.... .... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.
T Consensus 216 ~~~~~~~~~~~------g~i~~~d~~~~~~~~~~---~~~~-~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~ 279 (425)
T 1r5m_A 216 DDDKFVIPGPK------GAIFVYQITEKTPTGKL---IGHH-GPISVLEFNDTNKLLLSASDD------GTLRIWHGGNG 279 (425)
T ss_dssp ETTEEEEECGG------GCEEEEETTCSSCSEEE---CCCS-SCEEEEEEETTTTEEEEEETT------SCEEEECSSSB
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCceeeee---ccCC-CceEEEEECCCCCEEEEEcCC------CEEEEEECCCC
Confidence 33445666643 34999998876432221 1111 111222222 45566666543 35888988775
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWY 249 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~ 249 (499)
.....-. .....-.+++...++ +++.|+.+ ..+.+||+.+..-..... . ....-.+++.. ++.++
T Consensus 280 ~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~-~---~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 280 NSQNCFY----GHSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSI-V---DGVPIFAGRISQDGQKY 345 (425)
T ss_dssp SCSEEEC----CCSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEE-C---TTCCEEEEEECTTSSEE
T ss_pred ccceEec----CCCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecc-c---CCccEEEEEEcCCCCEE
Confidence 4322211 111222333444466 66666644 368999988765333211 1 01111122222 35666
Q ss_pred EEeCCCCCCCcceEEEEECCCCc
Q 010847 250 IVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 250 v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
++|+.++ .+.+||+.+..
T Consensus 346 ~~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 346 AVAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp EEEETTS-----CEEEEECHHHH
T ss_pred EEEECCC-----eEEEEECCCCc
Confidence 6666432 47788876554
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.34 E-value=0.14 Score=48.76 Aligned_cols=149 Identities=12% Similarity=0.053 Sum_probs=75.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcce-EEEEE-CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGH-SVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.+ ..+.+||+.++.+..+... ....... +++.. ++.+++.|+.+ ..+.+||+.+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHEL---KEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEE---ECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeee---cCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCC
Confidence 45566666542 3499999999877665532 1111122 22222 45666666643 3588999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc-eEecccCCCCCCcCcccEEEEE-CC
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-DE 246 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~ 246 (499)
..+........ .......+.+ .++.+++.|+.+ ..+.+||+.+.. |....... .+....-.+++.. ++
T Consensus 84 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 84 RTWKPTLVILR---INRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNS 154 (372)
T ss_dssp TEEEEEEECCC---CSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTS
T ss_pred CeeeeeEEeec---CCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCC
Confidence 88765543211 1122223333 344466666643 357777766544 32221100 1111111222222 45
Q ss_pred EEEEEeCCCCCCCcceEEEEECC
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMT 269 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~ 269 (499)
.+++.|+.++ .+.+||+.
T Consensus 155 ~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 155 VLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp SEEEEEETTS-----CEEEEECC
T ss_pred CEEEEEcCCC-----CEEEEEcc
Confidence 6677776433 46788853
No 66
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.32 E-value=0.88 Score=44.32 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=107.0
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
+.|.++|..++....+-.... ......++.+ ++.+++.|+.++ .+.++|+.+++-.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~----------------~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~ 182 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRL 182 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEE
Confidence 368899999998766544321 1122233333 456677777543 3899999888643
Q ss_pred EeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEc
Q 010847 123 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 202 (499)
Q Consensus 123 ~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 202 (499)
... ... .....+...++.+++.|+.+ ..+..+|..+.........+. ......+....++..++.|
T Consensus 183 ~~~---~~h--~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h---~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 183 RNM---TSH--SARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp EEE---CCC--SSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEE---eCC--CCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccc---ccceeeeeecCCCCeeeee
Confidence 332 111 12233445567777777654 357777776544332221111 1111122222344456666
Q ss_pred CCCCCCCCCcEEEEECCCCceE--ecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEecc
Q 010847 203 GCSHSIFFNDLHVLDLQTNEWS--QPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 278 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~W~--~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~ 278 (499)
+.+ +.+.++|..+..-. .+.... .....-.+++.. +..+++++|+..+ ..+.+||+.+..-.....
T Consensus 249 ~~D-----~~v~i~~~~~~~~~~~~~~~~~--~~~~~V~~~~~~p~~~~~la~~~gs~D---~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 249 GND-----NLVNVWPSAPGEGGWVPLQTFT--QHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp ETT-----SCEEEEESSCCSSCSCCSEEEC--CCSSCEEEEEECTTCTTEEEEEECTTT---CEEEEEETTTTEEEEEEE
T ss_pred ecc-----ccceEEeeccccccceeeeeec--ccCCceeeeeeCCCcccEEEEEeecCC---CEEEEEeCCccccceeec
Confidence 544 35777887654311 111000 000111112222 3455555443222 247788988876443222
Q ss_pred CCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 279 VKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 279 ~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.. ......+.......+++.+|... ..+.++|+..
T Consensus 319 ~~--------~~v~~~~~~~~~~~lv~~sg~~d---~~I~iwd~~~ 353 (420)
T 4gga_A 319 AH--------SQVCSILWSPHYKELISGHGFAQ---NQLVIWKYPT 353 (420)
T ss_dssp CS--------SCEEEEEEETTTTEEEEEECTTT---CCEEEEETTT
T ss_pred cc--------cceeeeeecCCCCeEEEEEecCC---CEEEEEECCC
Confidence 11 11122223334456666555431 3688888754
No 67
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.32 E-value=0.11 Score=43.96 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=24.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHH
Q 010847 427 SVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~----~~~~e~~~~~~~~~~~~~~~~ 478 (499)
.++...+.++.++.++++..-.++++.+... .++.++.+...+..-++.+++
T Consensus 99 ~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~ 154 (189)
T 2v71_A 99 QTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELD 154 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444444444444433332 455555555555555555554
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.24 E-value=0.51 Score=50.37 Aligned_cols=187 Identities=11% Similarity=0.040 Sum_probs=92.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.++++|+.+ ..+.+||..++.....-... .... .+++.. ++..++.|+.+ .
T Consensus 26 ~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~----------------~~~v-~~~~~s~~~~~l~~~~~d------g 77 (814)
T 3mkq_A 26 PWVLTTLYS-----GRVEIWNYETQVEVRSIQVT----------------ETPV-RAGKFIARKNWIIVGSDD------F 77 (814)
T ss_dssp SEEEEEETT-----SEEEEEETTTTEEEEEEECC----------------SSCE-EEEEEEGGGTEEEEEETT------S
T ss_pred CEEEEEeCC-----CEEEEEECCCCceEEEEecC----------------CCcE-EEEEEeCCCCEEEEEeCC------C
Confidence 555666532 35889999887654432211 0111 112222 45556666642 3
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCC-eeEEeeecCCCCCCCc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM-TWDAVEVTQTPPAPRY 186 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~p~~r~ 186 (499)
.+.+||..++.....-. ..+ ....++.+ ++..++.|+.+ ..+.+||+.++ .....-. + . ...
T Consensus 78 ~i~vw~~~~~~~~~~~~--~~~---~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~-~-~--~~~ 142 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFE--AHP---DYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFE-G-H--EHF 142 (814)
T ss_dssp EEEEEETTTCCEEEEEE--CCS---SCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEE-C-C--SSC
T ss_pred eEEEEECCCCcEEEEEe--cCC---CCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEc-C-C--CCc
Confidence 49999998887644321 111 11222222 34455555532 35888998765 3322221 1 1 111
Q ss_pred cceEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE---CCEEEEEeCCCCCCCcce
Q 010847 187 DHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 187 ~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~ 262 (499)
-.+++... ++.+++.|+.+ ..+.+||+.+..-..... . ........++.. ++..+++|+.++ .
T Consensus 143 v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~ 209 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLT-T--GQERGVNYVDYYPLPDKPYMITASDDL-----T 209 (814)
T ss_dssp EEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCSEEEE-C--CCTTCCCEEEECCSTTCCEEEEECTTS-----E
T ss_pred EEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeEEe-c--CCCCCEEEEEEEECCCCCEEEEEeCCC-----E
Confidence 12222333 45577777654 368899986654222110 1 111112223332 456777776432 5
Q ss_pred EEEEECCCCce
Q 010847 263 TIVLNMTKLAW 273 (499)
Q Consensus 263 ~~~~d~~~~~W 273 (499)
+.+||+.+..-
T Consensus 210 i~~~d~~~~~~ 220 (814)
T 3mkq_A 210 IKIWDYQTKSC 220 (814)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCcE
Confidence 78889877653
No 69
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.23 E-value=0.8 Score=42.87 Aligned_cols=186 Identities=12% Similarity=0.085 Sum_probs=92.9
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
+.+++.|+.+ ..+.++|+.++.-...-. ..+... .+++. -++..++.|+.+ ..+.+||+.+..
T Consensus 92 ~~~l~s~s~D------~~i~lWd~~~~~~~~~~~--~~~~~~--~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~ 155 (321)
T 3ow8_A 92 LPIAASSSLD------AHIRLWDLENGKQIKSID--AGPVDA--WTLAFSPDSQYLATGTHV------GKVNIFGVESGK 155 (321)
T ss_dssp SSEEEEEETT------SEEEEEETTTTEEEEEEE--CCTTCC--CCEEECTTSSEEEEECTT------SEEEEEETTTCS
T ss_pred CCEEEEEeCC------CcEEEEECCCCCEEEEEe--CCCccE--EEEEECCCCCEEEEEcCC------CcEEEEEcCCCc
Confidence 4566666643 348899998876433321 111111 12222 245666777643 358889987765
Q ss_pred eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEE
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYI 250 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v 250 (499)
-...-. . ....-.+++...++.+++.|+.+ ..+.+||+.+.+-...- .+ .. ..-.+++.. ++.+++
T Consensus 156 ~~~~~~--~--~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~~-~~-h~--~~v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 156 KEYSLD--T--RGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHTL-EG-HA--MPIRSLTFSPDSQLLV 222 (321)
T ss_dssp EEEEEE--C--SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE-CC-CS--SCCCEEEECTTSCEEE
T ss_pred eeEEec--C--CCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-cc-cC--CceeEEEEcCCCCEEE
Confidence 332211 0 11112223333455567777654 35899999877543211 01 00 111122332 456777
Q ss_pred EeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.|+.+. .+.+||+.+...... +.. +......+....+..+++.|+.++ .+.++|+..
T Consensus 223 s~s~dg-----~i~iwd~~~~~~~~~--~~~------h~~~v~~~~~sp~~~~l~s~s~D~----~v~iwd~~~ 279 (321)
T 3ow8_A 223 TASDDG-----YIKIYDVQHANLAGT--LSG------HASWVLNVAFCPDDTHFVSSSSDK----SVKVWDVGT 279 (321)
T ss_dssp EECTTS-----CEEEEETTTCCEEEE--ECC------CSSCEEEEEECTTSSEEEEEETTS----CEEEEETTT
T ss_pred EEcCCC-----eEEEEECCCcceeEE--EcC------CCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCC
Confidence 776443 378889877654321 111 111122233333233455677655 577788754
No 70
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.19 E-value=0.64 Score=44.43 Aligned_cols=209 Identities=11% Similarity=-0.031 Sum_probs=94.4
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
...++++|+.++.-..+... + ....+....- +++.+++............++.+|+.+.....+... .....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~---~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE---N-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH---AEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC---CTTEE
T ss_pred cceEEEEECCCCceEEeecC---C-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC---CCCcc
Confidence 35799999999877666521 1 1222223333 444333322222111255899999987776655421 11111
Q ss_pred cceEEEEcCc-EEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCC---CcCcccEEEEECCEEEEEeC---CCCCCC
Q 010847 187 DHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV---TGRAGHAGITIDENWYIVGG---GDNNNG 259 (499)
Q Consensus 187 ~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p---~~r~~~~~~~~~~~l~v~GG---~~~~~~ 259 (499)
....+...++ .|+...... ......++++|+.++.-..+....... ....+.+...-+..+++... ......
T Consensus 240 ~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEECTTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred cccceECCCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 1112222343 343333211 111124999999988766553211100 00011122222333333210 001122
Q ss_pred cceEEEEECCCCceEEeccCCCCCC----CCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCC
Q 010847 260 CQETIVLNMTKLAWSILTSVKGRNP----LASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 327 (499)
Q Consensus 260 ~~~~~~~d~~~~~W~~l~~~~~~~p----~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W 327 (499)
...++++|+.++.-..+........ .............++ .+|+......+ ...+|.+++....|
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg-~~l~~~s~~~g--~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD-KQILFTSDVHG--KPALYLATLPESVW 387 (388)
T ss_dssp CCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTS-SEEEEEECTTS--SCEEEEEECCGGGG
T ss_pred CCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCC-CEEEEEecCCC--ceeEEEEECChhcc
Confidence 4579999999988777654332000 000001112223333 35554443332 45799999876655
No 71
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.17 E-value=0.52 Score=43.93 Aligned_cols=193 Identities=11% Similarity=0.034 Sum_probs=87.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
.+..++.|+.+. .+.++|.....-.... ..........+.+ + +.+++.||.+ ..+.+||+
T Consensus 139 ~~~~l~s~s~d~------~~~~~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~s~~~d------~~i~i~d~ 202 (340)
T 4aow_A 139 DNRQIVSGSRDK------TIKLWNTLGVCKYTVQ----DESHSEWVSCVRFSPNSSNPIIVSCGWD------KLVKVWNL 202 (340)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEEC----SSSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEET
T ss_pred cCccceeecCCC------eEEEEEeCCCceEEEE----eccccCcccceEEccCCCCcEEEEEcCC------CEEEEEEC
Confidence 344555665432 2777777655433332 1111111222222 1 2455555543 35889999
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECC
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDE 246 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 246 (499)
.+.+....-. + ......++.+ .++.+++.|+.+ ..+.+||+.+..-...-. . ...-.+++...+
T Consensus 203 ~~~~~~~~~~-~----h~~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~~~~~~~~-~----~~~v~~~~~~~~ 267 (340)
T 4aow_A 203 ANCKLKTNHI-G----HTGYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEGKHLYTLD-G----GDIINALCFSPN 267 (340)
T ss_dssp TTTEEEEEEC-C----CSSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEEEEEEE-C----SSCEEEEEECSS
T ss_pred CCCceeeEec-C----CCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEeccCceeeeec-C----CceEEeeecCCC
Confidence 8876543321 1 1111222333 355577777754 358889987665332111 1 111122333344
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~-l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
..++.++.+ ..+.+||+.+..-.. +...........+......+....+..+++.||.++ .+.++|+++
T Consensus 268 ~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----~v~iW~~~t 337 (340)
T 4aow_A 268 RYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN----LVRVWQVTI 337 (340)
T ss_dssp SSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS----CEEEEEEEC
T ss_pred CceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC----EEEEEeCCC
Confidence 455555533 247788887765332 211111101111111222333333333455677665 577777654
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.14 E-value=0.26 Score=52.84 Aligned_cols=224 Identities=11% Similarity=0.023 Sum_probs=117.4
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
.++.||+.++++....... .....-.+++.. ++.|++... ..+++||+.++.|...
T Consensus 428 Gl~~~~~~~~~~~~~~~~~---------------~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEK---------------NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EEEEECSSSCEEEECCSTT---------------TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEE
T ss_pred CEEEEcCCCCcEEEeccCC---------------CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEec
Confidence 5777888888777664310 011122233333 467776431 2399999999998877
Q ss_pred ecCCCCCCCCcc-eEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEc
Q 010847 125 ETSGKVPVARGG-HSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 202 (499)
Q Consensus 125 ~~~g~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 202 (499)
......+..... .+++.. ++.|++..- .+.+++||+.+.++........+|.. .-.+++...++.|++..
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~~Gl~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTF-------GGGVGIYTPDMQLVRKFNQYEGFCSN-TINQIYRSSKGQMWLAT 556 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEES-------SSCEEEECTTCCEEEEECTTTTCSCS-CEEEEEECTTSCEEEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEc-------CCCEEEEeCCCCeEEEccCCCCCCCC-eeEEEEECCCCCEEEEE
Confidence 532111111111 122222 457776421 13489999999998877542222211 11222222356566643
Q ss_pred CCCCCCCCCcE-EEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCC
Q 010847 203 GCSHSIFFNDL-HVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 203 G~~~~~~~~~i-~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~ 280 (499)
. +-+ ++||+.++++........+|.... .+++.. ++.|++.+. +-+.+||+.+..+.......
T Consensus 557 ~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~d 621 (781)
T 3v9f_A 557 G-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSN 621 (781)
T ss_dssp T-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGG
T ss_pred C-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccC
Confidence 2 236 899999888877654333443332 344433 456666532 23889999999887764432
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 281 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 281 ~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+. + .......++....+..|+ |||.++ +..|++..
T Consensus 622 Gl-~--~~~f~~~~~~~~~~G~l~-~g~~~G-----l~~f~p~~ 656 (781)
T 3v9f_A 622 NI-P--QGSFISGCVTKDHNGLIY-FGSING-----LCFFNPDI 656 (781)
T ss_dssp TC-C--SSCEEEEEEEECTTSCEE-EEETTE-----EEEECSCC
T ss_pred Cc-c--ccccccCceEECCCCEEE-EECCCc-----eEEEChhh
Confidence 21 1 111222233333333444 577654 55666643
No 73
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.13 E-value=1.2 Score=46.96 Aligned_cols=235 Identities=10% Similarity=0.006 Sum_probs=117.1
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-C-CEEEEEcccCCCC----------CCCceEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKKS----------SDSMIVR 112 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~-~~iyv~GG~~~~~----------~~~~~~~ 112 (499)
..++++|+.++......... .. ..+++-. + ..||+.. ..... .....++
T Consensus 151 ~~i~v~d~~tg~~~~~~~~~-----------------~~-~~~~~wspDg~~l~~~~-~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLER-----------------VK-FSCMAWTHDGKGMFYNA-YPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp EEEEEEETTTTEEEEEEEEE-----------------EC-SCCEEECTTSSEEEEEE-CCCCSSCCSSSCCCCCCCCEEE
T ss_pred EEEEEEECCCCCCCcccccC-----------------cc-cceEEEEeCCCEEEEEE-ECCccccccccccccCCCCEEE
Confidence 37999999999887643211 11 1112222 3 3455443 22220 1234589
Q ss_pred EEECCCCcEE--EeecCCCCCCCCcceEEEE-ECC-EEEEEcCcCCCCCccCcEEEEECCC------C--eeEEeeecCC
Q 010847 113 FIDLETNLCG--VMETSGKVPVARGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLET------M--TWDAVEVTQT 180 (499)
Q Consensus 113 ~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~v~~yd~~t------~--~W~~~~~~~~ 180 (499)
++++.++... .+. . ....+.....+.. -++ .|++....... ..++++++|+.+ . .+..+....
T Consensus 212 ~~~l~t~~~~~~~v~-~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~- 286 (710)
T 2xdw_A 212 YHVLGTDQSEDILCA-E-FPDEPKWMGGAELSDDGRYVLLSIREGCD--PVNRLWYCDLQQESNGITGILKWVKLIDNF- 286 (710)
T ss_dssp EEETTSCGGGCEEEE-C-CTTCTTCEEEEEECTTSCEEEEEEECSSS--SCCEEEEEEGGGSSSSSCSSCCCEEEECSS-
T ss_pred EEECCCCcccceEEe-c-cCCCCeEEEEEEEcCCCCEEEEEEEccCC--CccEEEEEECcccccccCCccceEEeeCCC-
Confidence 9999887643 221 1 1111222222222 234 45544332211 256899999976 4 577776311
Q ss_pred CCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCC---ceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCC
Q 010847 181 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN 256 (499)
Q Consensus 181 ~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~ 256 (499)
.. .......+++.||+.+..+ .....|+.+|+.+. .|+.+.. ..+. ..-..++.. ++.+++....+
T Consensus 287 --~~--~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~~lv~~~~~~- 356 (710)
T 2xdw_A 287 --EG--EYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVP--EHEK-DVLEWVACVRSNFLVLCYLHD- 356 (710)
T ss_dssp --SS--CEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEEC--CCSS-CEEEEEEEETTTEEEEEEEET-
T ss_pred --Cc--EEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceeccC--CCCC-CeEEEEEEEcCCEEEEEEEEC-
Confidence 11 1122333466677776543 22457999999876 4887632 1111 112233444 56676665432
Q ss_pred CCCcceEEEEECCCCc-eEEeccCCCCCCCCCCCCceEEEEE--cCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 257 NNGCQETIVLNMTKLA-WSILTSVKGRNPLASEGLSVCSAII--EGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 257 ~~~~~~~~~~d~~~~~-W~~l~~~~~~~p~~~~~~~~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
....++++|+.++. ...+... .+ ....+.. ++...++.+.+. .....+|.||+...+
T Consensus 357 --g~~~l~~~~~~~g~~~~~l~~~--------~~-~v~~~~~s~d~~~l~~~~ss~--~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 --VKNTLQLHDLATGALLKIFPLE--------VG-SVVGYSGQKKDTEIFYQFTSF--LSPGIIYHCDLTKEE 416 (710)
T ss_dssp --TEEEEEEEETTTCCEEEEECCC--------SS-EEEEEECCTTCSEEEEEEECS--SCCCEEEEEETTSSS
T ss_pred --CEEEEEEEECCCCCEEEecCCC--------Cc-eEEEEecCCCCCEEEEEEeCC--CCCCEEEEEECCCCc
Confidence 24578999985554 4444321 11 1222222 233333433343 234589999987655
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.12 E-value=0.31 Score=46.84 Aligned_cols=204 Identities=8% Similarity=0.034 Sum_probs=92.4
Q ss_pred EEEEEcccCCCCCCCceEEEEECCCCc------EEEeecCCCCCCC---CcceEEEEE-----CCEE-EEEcCcCCCCCc
Q 010847 94 KLLILGGHYKKSSDSMIVRFIDLETNL------CGVMETSGKVPVA---RGGHSVTLV-----GSRL-IIFGGEDRSRKL 158 (499)
Q Consensus 94 ~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~~~~~~g~~p~~---r~~~~~~~~-----~~~l-yv~GG~~~~~~~ 158 (499)
.+++.|+.++ .+.+||+.++. +..+. ..+.. ..-.+++.. ++.. ++.|+.+
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d----- 147 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK----- 147 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----
Confidence 6777777533 38888887776 66554 22110 111223333 3455 6776653
Q ss_pred cCcEEEEECCC------Ce---eE---Eeee--cCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 159 LNDVHFLDLET------MT---WD---AVEV--TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 159 ~~~v~~yd~~t------~~---W~---~~~~--~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
..+.+||+.+ .. |. .+.. .........-.++....++ +++.|+.+ ..+.+||+.+....
T Consensus 148 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 148 -GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPL 220 (397)
T ss_dssp -SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEE
T ss_pred -CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCcee
Confidence 3577787765 22 11 1110 0000112222333444466 77777654 46999999876543
Q ss_pred ecccCCC--C-CCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEE-eccCC--CCCCCCC--CCCceEEE
Q 010847 225 QPEIKGD--L-VTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI-LTSVK--GRNPLAS--EGLSVCSA 295 (499)
Q Consensus 225 ~~~~~~~--~-p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~-l~~~~--~~~p~~~--~~~~~~~~ 295 (499)
..-. .. . +....-.+++.. ++.++++|+.++ ....+.+||+.+..-.. +.... ...+... +......+
T Consensus 221 ~~~~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 221 YNFE-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 297 (397)
T ss_dssp EEEE-CCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred EEEe-ccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE
Confidence 3211 10 0 001111222222 456666666431 11358899987765322 22100 0000000 11223333
Q ss_pred EEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 296 IIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 296 ~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
....+..+++.|+.++ .+.+||+...
T Consensus 298 ~~~~~~~~l~~~~~dg----~i~iwd~~~~ 323 (397)
T 1sq9_A 298 SFNDSGETLCSAGWDG----KLRFWDVKTK 323 (397)
T ss_dssp EECSSSSEEEEEETTS----EEEEEETTTT
T ss_pred EECCCCCEEEEEeCCC----eEEEEEcCCC
Confidence 3333223455566554 6888888654
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.11 E-value=0.92 Score=43.84 Aligned_cols=190 Identities=12% Similarity=0.051 Sum_probs=92.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++ .+.+||+.++.-.... ........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCC
Confidence 566777776532 3899998877543331 111112222333 45566666643 3589999877
Q ss_pred CeeE-EeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEE-----
Q 010847 170 MTWD-AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGIT----- 243 (499)
Q Consensus 170 ~~W~-~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~----- 243 (499)
.+-. .+. + ....-.+++...++..++.|+.+ ..+.+||+.+..-...-.....+. ..-.+++.
T Consensus 171 ~~~~~~~~--~---h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 171 GSNPRTLI--G---HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPH-DGVNSIALFVGTD 239 (420)
T ss_dssp CCCCEEEE--C---CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTT-CCEEEEEEEECCC
T ss_pred CcCceEEc--C---CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCC-CCccEEEEecCCc
Confidence 5422 121 1 01111223333344466666654 358899988765332110000000 00011111
Q ss_pred -----------------ECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCc-eEEEE
Q 010847 244 -----------------IDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE-HHLVA 305 (499)
Q Consensus 244 -----------------~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~-~~l~v 305 (499)
-++.+++.|+.++ .+.+||+.+..-.... .. .+......+....+ ..+++
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~--~~-----~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQL--PS-----KFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEE--CC-----TTSSCEEEEEECSSCTTEEE
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEc--cc-----ccCCCceeEEEeCCCCCEEE
Confidence 1456666666433 3788998776532211 11 01112233333332 32566
Q ss_pred EcCCCCCCCceEEEEECCCC
Q 010847 306 FGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 306 ~GG~~~~~~~~~~~~~~~~~ 325 (499)
.|+.++ .+.++|+...
T Consensus 308 ~g~~dg----~i~vwd~~~~ 323 (420)
T 3vl1_A 308 AGYENG----MLAQWDLRSP 323 (420)
T ss_dssp EEETTS----EEEEEETTCT
T ss_pred EEeCCC----eEEEEEcCCC
Confidence 677655 7888998764
No 76
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.11 E-value=0.87 Score=44.29 Aligned_cols=106 Identities=14% Similarity=0.091 Sum_probs=55.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++. +.+||+.+..- +. .+........++.+ ++..++.|+.+ ..+.+||+.+
T Consensus 161 ~~~~l~sgs~D~~------i~iwd~~~~~~--~~---~~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADMT------IKLWDFQGFEC--IR---TMHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTSC------CCEEETTSSCE--EE---CCCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEeCCCe------EEEEeCCCCce--eE---EEcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCC
Confidence 4567777775433 67778876543 22 11111112223333 45566666653 3588999987
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
..-...-. + ......++.+ .++.+++.|+.+ +.+.+||+.+....
T Consensus 224 ~~~~~~~~-~----h~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 224 GYCVKTFT-G----HREWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKECK 269 (410)
T ss_dssp CCEEEEEE-C----CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CcEEEEEe-C----CCccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcee
Confidence 75432211 1 1111222233 355567777654 35888888776543
No 77
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.07 E-value=0.73 Score=48.37 Aligned_cols=154 Identities=8% Similarity=-0.033 Sum_probs=75.0
Q ss_pred cCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCC-ceEecccCCC-CCCc
Q 010847 159 LNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQPEIKGD-LVTG 235 (499)
Q Consensus 159 ~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~-~W~~~~~~~~-~p~~ 235 (499)
...++++|+.+.+-..+... .........+.+ .++..++++..+.......++.+|+.++ ....+..... ....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG---EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC---SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eeEEEEEECCCCceEeeccC---CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 45799999998876554321 111112222333 3544455544433333457999999988 6665431110 0000
Q ss_pred CcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCC
Q 010847 236 RAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKY 313 (499)
Q Consensus 236 r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~ 313 (499)
........- ++++++.+..+ ....+|.+|........+..-. ...........+...|++.+..++..
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~---g~~~l~~~~~~~~~~~~l~~~~-------~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRD---GWNHLYLYDTTGRLIRQVTKGE-------WEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTT---SSCEEEEEETTSCEEEECCCSS-------SCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred ccCCceeecCCCCEEEEEEccC---CccEEEEEECCCCEEEecCCCC-------eEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 001112222 55655555432 2457899997777666663211 01111112222334565555443333
Q ss_pred CceEEEEECCCC
Q 010847 314 NNEVFVMRLKPR 325 (499)
Q Consensus 314 ~~~~~~~~~~~~ 325 (499)
...+|.+|+...
T Consensus 381 ~~~l~~~d~~~~ 392 (706)
T 2z3z_A 381 ERHFYCIDIKGG 392 (706)
T ss_dssp CBEEEEEETTCC
T ss_pred eEEEEEEEcCCC
Confidence 457777777554
No 78
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.02 E-value=0.065 Score=55.56 Aligned_cols=9 Identities=22% Similarity=0.246 Sum_probs=3.9
Q ss_pred EEECCCCCC
Q 010847 319 VMRLKPRDI 327 (499)
Q Consensus 319 ~~~~~~~~W 327 (499)
.+++..+.|
T Consensus 349 ~L~l~~N~~ 357 (597)
T 3oja_B 349 NLTLSHNDW 357 (597)
T ss_dssp EEECCSSCE
T ss_pred EEEeeCCCC
Confidence 344444433
No 79
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.02 E-value=1 Score=42.16 Aligned_cols=185 Identities=12% Similarity=0.087 Sum_probs=90.2
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++..++.|+.+ ..+.+||..++.-..... .. ...-.+++. -++++++.|+.+ ..+.+||+.+.
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~---~~-~~~v~~~~~spdg~~lasg~~d------g~i~iwd~~~~ 196 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLD---TR-GKFILSIAYSPDGKYLASGAID------GIINIFDIATG 196 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEE---CS-SSCEEEEEECTTSSEEEEEETT------SCEEEEETTTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEec---CC-CceEEEEEECCCCCEEEEEcCC------CeEEEEECCCC
Confidence 45566666543 348888988775432221 11 111112222 245666777654 35899999887
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWY 249 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~ 249 (499)
+-...-. + . ...-.+++...++.+++.|+.+ ..+.+||+.+......- .+ ....-.+++.. ++..+
T Consensus 197 ~~~~~~~-~-h--~~~v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 197 KLLHTLE-G-H--AMPIRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLAGTL-SG---HASWVLNVAFCPDDTHF 263 (321)
T ss_dssp EEEEEEC-C-C--SSCCCEEEECTTSCEEEEECTT-----SCEEEEETTTCCEEEEE-CC---CSSCEEEEEECTTSSEE
T ss_pred cEEEEEc-c-c--CCceeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcceeEEE-cC---CCCceEEEEECCCCCEE
Confidence 6432211 1 1 1111223333455577777654 35889998776543311 01 01111122222 45667
Q ss_pred EEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEEC
Q 010847 250 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 322 (499)
Q Consensus 250 v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 322 (499)
+.|+.+. .+.++|+.+..-.. .+... ......+....+...++.||.++ .+.++|.
T Consensus 264 ~s~s~D~-----~v~iwd~~~~~~~~--~~~~h------~~~v~~v~~s~~g~~l~s~~~d~----~i~vwd~ 319 (321)
T 3ow8_A 264 VSSSSDK-----SVKVWDVGTRTCVH--TFFDH------QDQVWGVKYNGNGSKIVSVGDDQ----EIHIYDC 319 (321)
T ss_dssp EEEETTS-----CEEEEETTTTEEEE--EECCC------SSCEEEEEECTTSSEEEEEETTC----CEEEEEC
T ss_pred EEEeCCC-----cEEEEeCCCCEEEE--EEcCC------CCcEEEEEECCCCCEEEEEeCCC----eEEEEeC
Confidence 7776443 47788987765332 22111 11222333333333455676655 4666664
No 80
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.99 E-value=0.89 Score=47.75 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=66.9
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCC---ccceeEEEECCEEEEEcccCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPP---MSDHCMVKWGTKLLILGGHYKKS 105 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~---r~~~s~~~~~~~iyv~GG~~~~~ 105 (499)
.||+... .+.++.+|..+++ |+.-...... ..+.. ....+.++.++.||+...
T Consensus 79 ~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-----------~~~~~~~~~~~~~~a~~~~~v~v~~~----- 136 (677)
T 1kb0_A 79 IMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRS-----------TGFKGCCDVVNRGVALWKGKVYVGAW----- 136 (677)
T ss_dssp EEEEECG------GGCEEEEETTTTEEEEEECCCCCGG-----------GGGGSSSCSCCCCCEEETTEEEEECT-----
T ss_pred EEEEECC------CCeEEEEECCCCcEEEEEcCCCCcc-----------ccccccccCCCCCceEECCEEEEEcC-----
Confidence 6666543 2469999999876 8775432210 00000 112245567888888643
Q ss_pred CCCceEEEEECCCCc--EEEeecCCCCCC-CCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEee
Q 010847 106 SDSMIVRFIDLETNL--CGVMETSGKVPV-ARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVE 176 (499)
Q Consensus 106 ~~~~~~~~yd~~t~~--W~~~~~~g~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~ 176 (499)
...++.+|..|++ |+..... ..+. .....+.++.++.+|+..+... ......++.||..|++ |+.-.
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred --CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEecc
Confidence 2349999998875 7765310 1111 1122233456788776443221 1124579999998875 86543
No 81
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.98 E-value=1.7 Score=44.52 Aligned_cols=124 Identities=10% Similarity=0.130 Sum_probs=68.1
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEEC-CCC--cEEEeecCCC--CCCC---CcceEEEEECCEEEEEcCcCCCCCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDL-ETN--LCGVMETSGK--VPVA---RGGHSVTLVGSRLIIFGGEDRSRKL 158 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~--~W~~~~~~g~--~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~ 158 (499)
+.++.++.||+.... ...++.+|. .++ .|+.-..... .+.. ....+.+..+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 345679999998652 123999999 776 4876431100 0001 112234567888888643
Q ss_pred cCcEEEEECCCC--eeEEeeecCCCCCC-CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEec
Q 010847 159 LNDVHFLDLETM--TWDAVEVTQTPPAP-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 159 ~~~v~~yd~~t~--~W~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~ 226 (499)
...++++|..|+ .|+.-.. ..+.. ....+.++. ++.+|+..+......-..++.||..+++ |+.-
T Consensus 124 dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 124 NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 246999999877 4875421 11111 111122333 5656554332111123579999998775 8763
No 82
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.98 E-value=0.044 Score=56.85 Aligned_cols=8 Identities=25% Similarity=0.663 Sum_probs=3.1
Q ss_pred EEEEEcCC
Q 010847 47 VQVFDLRS 54 (499)
Q Consensus 47 ~~~yd~~t 54 (499)
+..+|+..
T Consensus 77 L~~L~L~~ 84 (597)
T 3oja_B 77 VELLNLND 84 (597)
T ss_dssp CSEEECTT
T ss_pred CcEEECCC
Confidence 33344433
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.14 Score=54.68 Aligned_cols=107 Identities=13% Similarity=0.146 Sum_probs=61.9
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++.+++.||.+ ..+.+||..+..+..+.. +........++.+ + +.+++.|+.+ ..+.++|+
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEEC
Confidence 34566666643 348888888777776653 2211222233333 2 5677777754 35899999
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEc-C--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHA-N--RYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~-~--~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
.++.|..+..... ......++.+. + +.+++.|+.+ ..+.+||+.+.
T Consensus 85 ~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 85 ENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp ETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred CCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 9998876664321 22223333332 3 4467777654 36888888765
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.88 E-value=1.3 Score=42.44 Aligned_cols=191 Identities=10% Similarity=0.019 Sum_probs=90.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCC-----------CCcceEEEEECCEEEEEcCcCCCCCccC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV-----------ARGGHSVTLVGSRLIIFGGEDRSRKLLN 160 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~-----------~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 160 (499)
++..++.|+.+ ..+.+||+.++...........+. ...-.+++...+..++.|+.+ .
T Consensus 160 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g 227 (425)
T 1r5m_A 160 DGTHIISMDVE------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------G 227 (425)
T ss_dssp TSSEEEEEETT------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------G
T ss_pred CCCEEEEEecC------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------C
Confidence 34555556543 238899998876544331111110 000222333334446666643 4
Q ss_pred cEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccE
Q 010847 161 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHA 240 (499)
Q Consensus 161 ~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~ 240 (499)
.+.+||+.+..-...-. . ....-.+++...++.+++.|+.+ ..+.+||+.+......- . .....-.+
T Consensus 228 ~i~~~d~~~~~~~~~~~--~--~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~--~~~~~i~~ 294 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLI--G--HHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCF--Y--GHSQSIVS 294 (425)
T ss_dssp CEEEEETTCSSCSEEEC--C--CSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEE--C--CCSSCEEE
T ss_pred eEEEEEcCCCceeeeec--c--CCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEe--c--CCCccEEE
Confidence 69999998764322111 0 11111233333344466666643 35888988765432211 0 11112223
Q ss_pred EEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEE
Q 010847 241 GITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVM 320 (499)
Q Consensus 241 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 320 (499)
++...+.+++.|+.++ .+.+||+.+..-....... ......+....+..+++.|+.++ .+.+|
T Consensus 295 ~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~dg----~i~i~ 357 (425)
T 1r5m_A 295 ASWVGDDKVISCSMDG-----SVRLWSLKQNTLLALSIVD--------GVPIFAGRISQDGQKYAVAFMDG----QVNVY 357 (425)
T ss_dssp EEEETTTEEEEEETTS-----EEEEEETTTTEEEEEEECT--------TCCEEEEEECTTSSEEEEEETTS----CEEEE
T ss_pred EEECCCCEEEEEeCCC-----cEEEEECCCCcEeEecccC--------CccEEEEEEcCCCCEEEEEECCC----eEEEE
Confidence 3444333666665432 5889998776533321110 11222333333333555666554 67788
Q ss_pred ECCC
Q 010847 321 RLKP 324 (499)
Q Consensus 321 ~~~~ 324 (499)
|+..
T Consensus 358 ~~~~ 361 (425)
T 1r5m_A 358 DLKK 361 (425)
T ss_dssp ECHH
T ss_pred ECCC
Confidence 8753
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.86 E-value=0.32 Score=46.72 Aligned_cols=225 Identities=11% Similarity=0.075 Sum_probs=101.1
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
.+.+||+.++.-...-.... +......... ++.+++.|+.++ .+.+||+.+..-..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEE----------------TVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEETTTTEEEEEEECSS----------------CEEEEEECSSCSSCCEEEEEESSS------SEEEEESSSSCCCE
T ss_pred eEEEeeCCCCccceeccCCC----------------ceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCCcceee
Confidence 58889998877554433211 1111111111 334666666432 38899988765322
Q ss_pred eecCCCCCCCCcceEEEEE--C-CEEEEEcCcCCCCCccCcEEEEECCCCe--eEEeeecC-----CC----CCCCccce
Q 010847 124 METSGKVPVARGGHSVTLV--G-SRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQ-----TP----PAPRYDHS 189 (499)
Q Consensus 124 ~~~~g~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~-----~~----p~~r~~~~ 189 (499)
.- . .......++.+ + ..+++.|+.+ ..+.+||+.+.. ...+.... .. ........
T Consensus 181 ~~---~--~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (408)
T 4a11_B 181 IL---Q--GHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN 249 (408)
T ss_dssp EE---C--CCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred ee---c--CCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence 21 1 11111222233 2 2377777654 358888886543 22221000 00 11111122
Q ss_pred EEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCc--ccEEEEECCEEEEEeCCCCCCCcceEEEE
Q 010847 190 AALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRA--GHAGITIDENWYIVGGGDNNNGCQETIVL 266 (499)
Q Consensus 190 ~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~--~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 266 (499)
.+.+ .++..++.|+.+ +.+.+||+.+..-.............. ........+..+++++.+ ..+.+|
T Consensus 250 ~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~ 319 (408)
T 4a11_B 250 GLCFTSDGLHLLTVGTD-----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVY 319 (408)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEE
T ss_pred EEEEcCCCCEEEEecCC-----CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEE
Confidence 2333 344456666654 358999988765433211111111111 111111123334444322 268889
Q ss_pred ECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 267 NMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 267 d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
|+.+..-... +... ......+....+..+++.|+.++ .+.++|+...
T Consensus 320 d~~~~~~~~~--~~~~------~~~v~~~~~s~~~~~l~s~~~dg----~i~iw~~~~~ 366 (408)
T 4a11_B 320 TVYSGEQITM--LKGH------YKTVDCCVFQSNFQELYSGSRDC----NILAWVPSLY 366 (408)
T ss_dssp ETTTCCEEEE--ECCC------SSCEEEEEEETTTTEEEEEETTS----CEEEEEECC-
T ss_pred ECcCCcceee--eccC------CCeEEEEEEcCCCCEEEEECCCC----eEEEEeCCCC
Confidence 9877654322 2111 11122223333223455677665 6777777654
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.85 E-value=1.2 Score=41.49 Aligned_cols=151 Identities=15% Similarity=0.069 Sum_probs=71.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcC-CCceEEeeeCcccccCccccCCCCCCCCCccceeEEE--ECCEEEEEcccCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLR-SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK--WGTKLLILGGHYKKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~--~~~~iyv~GG~~~~~~~ 107 (499)
.+|+.++. -..+.+||+. +++...+..... ...-.+++. -++.||+.+...
T Consensus 6 ~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~spdg~~l~~~~~~~----- 59 (343)
T 1ri6_A 6 TVYIASPE-----SQQIHVWNLNHEGALTLTQVVDV----------------PGQVQPMVVSPDKRYLYVGVRPE----- 59 (343)
T ss_dssp EEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEC----------------SSCCCCEEECTTSSEEEEEETTT-----
T ss_pred EEEEeCCC-----CCeEEEEEECCCCcEEEeeeEec----------------CCCCceEEECCCCCEEEEeecCC-----
Confidence 56666442 2357888874 566665544321 111111222 244566654421
Q ss_pred CceEEEEECC--CCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcCcCCCCCccCcEEEEECCCCe-eEEeeecCCCC
Q 010847 108 SMIVRFIDLE--TNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPP 182 (499)
Q Consensus 108 ~~~~~~yd~~--t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p 182 (499)
..+.+|++. ++.+..+... +....-..++.. ++ .||+.+.. .+.+.+||+.+.. ...+.....
T Consensus 60 -~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~-- 127 (343)
T 1ri6_A 60 -FRVLAYRIAPDDGALTFAAES---ALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVEG-- 127 (343)
T ss_dssp -TEEEEEEECTTTCCEEEEEEE---ECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEECC--
T ss_pred -CeEEEEEecCCCCceeecccc---ccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccccC--
Confidence 347777665 7787766421 111111222222 33 56665432 2358888874322 222222111
Q ss_pred CCCccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCC-CceEe
Q 010847 183 APRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQ 225 (499)
Q Consensus 183 ~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~ 225 (499)
...-+.++...+ +.+|+.+..+ +.+.+||+.+ .+...
T Consensus 128 -~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 128 -LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVA 166 (343)
T ss_dssp -CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEE
T ss_pred -CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceee
Confidence 111223333333 4566654222 4699999887 65553
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.83 E-value=0.11 Score=49.67 Aligned_cols=150 Identities=11% Similarity=0.131 Sum_probs=71.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+++.|+.+ ..+.+||+.++.|..+..... .......+.+ ++.+++.|+.++
T Consensus 24 ~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~----------------h~~~v~~~~~s~~~~~l~s~s~d~----- 77 (377)
T 3dwl_C 24 TEFVTTTAT-----NQVELYEQDGNGWKHARTFSD----------------HDKIVTCVDWAPKSNRIVTCSQDR----- 77 (377)
T ss_dssp SEEECCCSS-----SCBCEEEEETTEEEECCCBCC----------------CSSCEEEEEECTTTCCEEEEETTS-----
T ss_pred CEEEEecCC-----CEEEEEEccCCceEEEEEEec----------------CCceEEEEEEeCCCCEEEEEeCCC-----
Confidence 666777643 357889999988877765532 1112222333 356666776432
Q ss_pred ceEEEEECCCCc-EEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCe-eEEeeecCCCCCC
Q 010847 109 MIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAP 184 (499)
Q Consensus 109 ~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p~~ 184 (499)
.+.+||+.++. |..... .........++.+ ++.+++.|+.+ ..+.+||+.+.+ |..+..... +..
T Consensus 78 -~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~-~h~ 146 (377)
T 3dwl_C 78 -NAYVYEKRPDGTWKQTLV---LLRLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKR-PLR 146 (377)
T ss_dssp -SEEEC------CCCCEEE---CCCCSSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECS-SCC
T ss_pred -eEEEEEcCCCCceeeeeE---ecccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeec-ccC
Confidence 38888988876 544332 1111112222333 45666666643 247888877654 322222111 111
Q ss_pred CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 185 RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 185 r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
..-.+++...++.+++.|+.+ ..+.+||+.+..
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 179 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCAD-----RKAYVLSAYVRD 179 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESS-----SCEEEEEECCSS
T ss_pred CCeEEEEEcCCCCEEEEEeCC-----CEEEEEEEEecc
Confidence 112223333355567777654 358888876443
No 88
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.81 E-value=2.3 Score=44.67 Aligned_cols=123 Identities=18% Similarity=0.137 Sum_probs=66.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 108 (499)
.||+... .+.++.+|..+++ |+.-...... .. ..........+.++.++.||+... .
T Consensus 72 ~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~------~~--~~~~~~~~~~~~~~~~g~v~v~~~-------d 130 (689)
T 1yiq_A 72 VMYTTGP------FSVVYALDARDGRLIWKYDPQSDRH------RA--GEACCDAVNRGVAVWKGKVYVGVL-------D 130 (689)
T ss_dssp EEEEECG------GGCEEEEETTTCCEEEEECCCCCGG------GG--GGCTTCSCCCCCEEETTEEEEECT-------T
T ss_pred EEEEEcC------CCeEEEEECCCCceeEEEcCCCCcc------cc--ccccccCCCCccEEECCEEEEEcc-------C
Confidence 6666543 2469999998875 8864432110 00 000000112234567888887642 2
Q ss_pred ceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEe
Q 010847 109 MIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 175 (499)
Q Consensus 109 ~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~ 175 (499)
..++.+|..|++ |+...............+.++.++.+|+-.+.. .......++.||..|++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA-EFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC-ccCCCCEEEEEECCCCcEEEEec
Confidence 349999998884 876542001111112223455688887732221 11124579999998875 8754
No 89
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.80 E-value=0.22 Score=37.89 Aligned_cols=49 Identities=8% Similarity=0.088 Sum_probs=20.4
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
++..+...+....+.+.++..++..++.++..+.+.+..+.+..++|..
T Consensus 28 ~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee 76 (101)
T 3u1c_A 28 AEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLF 76 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444444444444444444444444444444444333
No 90
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.80 E-value=0.26 Score=46.74 Aligned_cols=185 Identities=8% Similarity=0.037 Sum_probs=91.1
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.||.++ .+.++|..++.|...... .........++.+ ++.+++.|+.+. .+.++|..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccC
Confidence 466777777543 388888888887644321 0101111222333 456677777543 477888877
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc-eEecccCCCCCCcCcccEEEEE-CC
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-DE 246 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~ 246 (499)
..+..+..... .......+.+ .++.+++.|+.+ ..+.++|+.+.. +..+...... ...-.+++.. ++
T Consensus 93 ~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 93 DDFECVTTLEG---HENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSH--TQDVKHVVWHPSQ 162 (345)
T ss_dssp C-EEEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCC--CSCEEEEEECSSS
T ss_pred CCeEEEEEccC---CCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCc--CCCeEEEEECCCC
Confidence 76655443211 1112223333 355567777654 358888876543 3222110100 0011122222 34
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCC
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 311 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~ 311 (499)
.+++.|+.++ .+.+||..+..|..+..+... ......+....+..+++.|+.++
T Consensus 163 ~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h------~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 163 ELLASASYDD-----TVKLYREEEDDWVCCATLEGH------ESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEETTS-----CEEEEEEETTEEEEEEEECCC------SSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEeCCC-----cEEEEEecCCCEEEEEEecCC------CCceEEEEECCCCCEEEEEeCCC
Confidence 5666666443 367788888877655443321 11222333333333555666654
No 91
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.79 E-value=0.32 Score=47.81 Aligned_cols=109 Identities=11% Similarity=0.073 Sum_probs=60.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
++.+++.|+.++ .+.++|+.+..-.... ........-.++.+ ++.+++.|+.+. .|.++|+.
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~---~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFI---KGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEE---CCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEE---EccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeecc
Confidence 456777887543 3888898877544333 11111111122333 456667777543 48889998
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
+.....+..... ......++....++.+++.|+.+ ..|.++|+....
T Consensus 196 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~ 242 (435)
T 4e54_B 196 GNILRVFASSDT--INIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE 242 (435)
T ss_dssp SCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB
T ss_pred CCceeEEeccCC--CCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce
Confidence 877665543221 12222233344455577777754 358899986543
No 92
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.75 E-value=1.4 Score=41.68 Aligned_cols=112 Identities=12% Similarity=0.052 Sum_probs=53.4
Q ss_pred eEEEEcCCCCCc-ccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCC
Q 010847 31 KLYIVGGSRNGR-FLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~-~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~ 107 (499)
..+++|.+.... ..-.++.+|+.++++..+... .. .... .++.. +..||+.+..... ..
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~---------------~~p~-~l~~spdg~~l~~~~~~~~~-~~ 75 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EV---------------ANPS-YLIPSADGKFVYSVNEFSKD-QA 75 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-EC---------------SCCC-SEEECTTSSEEEEEECCSST-TC
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cC---------------CCCc-eEEECCCCCEEEEEEccCCC-CC
Confidence 445567664321 112356678888988877653 10 1111 12221 3457666543211 11
Q ss_pred CceEEEEECCCCcEEEeecCCCCCC-CCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPV-ARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
.-.+|.++..++....+.. .+. ...-..++.-++.||+.+.. .+.+.+|++.+
T Consensus 76 ~v~~~~~~~~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~ 129 (361)
T 3scy_A 76 AVSAFAFDKEKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQ 129 (361)
T ss_dssp EEEEEEEETTTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCT
T ss_pred cEEEEEEeCCCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCC
Confidence 2234556666677776652 221 11112222323356665432 24588888864
No 93
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.73 E-value=0.16 Score=38.65 Aligned_cols=70 Identities=13% Similarity=0.098 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 010847 383 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM 452 (499)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 452 (499)
+..|+.++............+...........+.++..+.+.++.++.+++..++++.+....+.+.++.
T Consensus 11 m~~lk~e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~ 80 (101)
T 3u1c_A 11 MQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEEN 80 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444444555555555555555555555555555555444444444333
No 94
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.72 E-value=1.2 Score=40.77 Aligned_cols=234 Identities=11% Similarity=-0.094 Sum_probs=116.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||+++.. ...++.||+.++ ...+... ....++++.. ++.||+.... ..
T Consensus 41 ~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~------------------~~~~~~l~~~~dg~l~v~~~~------~~ 90 (296)
T 3e5z_A 41 AVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP------------------SHHQNGHCLNKQGHLIACSHG------LR 90 (296)
T ss_dssp EEEEEEGG-----GTEEEEEETTSC-EEEEESS------------------CSSEEEEEECTTCCEEEEETT------TT
T ss_pred EEEEEeCC-----CCEEEEEECCCC-eEEEECC------------------CCCcceeeECCCCcEEEEecC------CC
Confidence 37777653 236899999988 5555432 1112233332 5677766431 23
Q ss_pred eEEEEECCCCcEEEeecC-CCCCCCCcceEEEEECCEEEEE----cCcCC-------CCCccCcEEEEECCCCeeEEeee
Q 010847 110 IVRFIDLETNLCGVMETS-GKVPVARGGHSVTLVGSRLIIF----GGEDR-------SRKLLNDVHFLDLETMTWDAVEV 177 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~-g~~p~~r~~~~~~~~~~~lyv~----GG~~~-------~~~~~~~v~~yd~~t~~W~~~~~ 177 (499)
.+.+||+.+++...+... ...+..+....++.-+++||+. |.... .......++.||+. .+...+..
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR 169 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec
Confidence 499999989888766421 0111111122223335688886 43110 01113478999887 55554432
Q ss_pred cCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECC-CCce-EecccCCCCCCcCcccEEEEE-CCEEEEEeCC
Q 010847 178 TQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEW-SQPEIKGDLVTGRAGHAGITI-DENWYIVGGG 254 (499)
Q Consensus 178 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W-~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~ 254 (499)
... .-..++...++.+++.+.. .+.+++||+. ++.. ...... ..... .-.+++.. ++.+||..+
T Consensus 170 --~~~---~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~-~~~~~-~p~~i~~d~~G~l~v~~~- 236 (296)
T 3e5z_A 170 --DRV---KPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHF-TVEPG-KTDGLRVDAGGLIWASAG- 236 (296)
T ss_dssp --CCS---SEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEE-CCSSS-CCCSEEEBTTSCEEEEET-
T ss_pred --CCC---CCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEe-eCCCC-CCCeEEECCCCCEEEEcC-
Confidence 111 1123333334445544322 2479999986 4555 221111 11111 11123332 567887751
Q ss_pred CCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCCC
Q 010847 255 DNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 328 (499)
Q Consensus 255 ~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W~ 328 (499)
+.+.+||+.......+..... ...+.....+...|++... ..+|+|++++..-+
T Consensus 237 ------~~v~~~~~~g~~~~~~~~~~~--------~~~~~f~~~d~~~L~v~t~------~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 237 ------DGVHVLTPDGDELGRVLTPQT--------TSNLCFGGPEGRTLYMTVS------TEFWSIETNVRGLE 290 (296)
T ss_dssp ------TEEEEECTTSCEEEEEECSSC--------CCEEEEESTTSCEEEEEET------TEEEEEECSCCBCC
T ss_pred ------CeEEEECCCCCEEEEEECCCC--------ceeEEEECCCCCEEEEEcC------CeEEEEEccccccc
Confidence 358899998655444432211 1111121223346776442 26999998776544
No 95
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.72 E-value=1.5 Score=46.19 Aligned_cols=211 Identities=11% Similarity=0.036 Sum_probs=101.8
Q ss_pred cccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCC
Q 010847 42 RFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETN 119 (499)
Q Consensus 42 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 119 (499)
.....+++.+...+.|+.+-..... + .........+.+ +++.++++....... ...++++|+.++
T Consensus 95 ~~~~~l~~~~~~~~~~~~lld~~~l----------~--~~~~~~~~~~~~SPDg~~la~~~~~~G~~-~~~i~v~d~~tg 161 (710)
T 2xdw_A 95 QNQRVLYVQDSLEGEARVFLDPNIL----------S--DDGTVALRGYAFSEDGEYFAYGLSASGSD-WVTIKFMKVDGA 161 (710)
T ss_dssp CSSCEEEEESSTTSCCEEEECGGGG----------C--TTSCEEEEEEEECTTSSEEEEEEEETTCS-CEEEEEEETTTT
T ss_pred ceEEEEEEEcCCCCCcEEEECHHHh----------c--cCCCEEEEEEEECCCCCEEEEEEcCCCCc-eEEEEEEECCCC
Confidence 3445678888877888765322110 0 001111122222 444444443322211 236999999999
Q ss_pred cEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcCcCCC---------CCccCcEEEEECCCCeeE--EeeecCCCCCCCc
Q 010847 120 LCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRS---------RKLLNDVHFLDLETMTWD--AVEVTQTPPAPRY 186 (499)
Q Consensus 120 ~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~---------~~~~~~v~~yd~~t~~W~--~~~~~~~~p~~r~ 186 (499)
........+ .. ...++.. ++ .||+....... ......++.+++.+.... .+.. ....+..
T Consensus 162 ~~~~~~~~~----~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~--~~~~~~~ 234 (710)
T 2xdw_A 162 KELPDVLER----VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE--FPDEPKW 234 (710)
T ss_dssp EEEEEEEEE----EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC--CTTCTTC
T ss_pred CCCcccccC----cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec--cCCCCeE
Confidence 877643211 11 1122222 44 45544322110 013456999999887632 2211 1111222
Q ss_pred cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCC------C--ceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCC
Q 010847 187 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT------N--EWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNN 258 (499)
Q Consensus 187 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~------~--~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 258 (499)
......-.++..++++........++++++|+.+ . .+..+... ... ........++.+|+.+..+.
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~---~~~-~~~~~s~dg~~l~~~s~~~~-- 308 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN---FEG-EYDYVTNEGTVFTFKTNRHS-- 308 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS---SSS-CEEEEEEETTEEEEEECTTC--
T ss_pred EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC---CCc-EEEEEeccCCEEEEEECCCC--
Confidence 2233333344334443322222257899999876 4 57666321 111 11122334667887765322
Q ss_pred CcceEEEEECCCC---ceEEecc
Q 010847 259 GCQETIVLNMTKL---AWSILTS 278 (499)
Q Consensus 259 ~~~~~~~~d~~~~---~W~~l~~ 278 (499)
....++++|+.+. .|..+..
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEEC
T ss_pred CCCEEEEEeCCCCCcccceeccC
Confidence 2357999998875 5887643
No 96
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=95.67 E-value=0.43 Score=36.50 Aligned_cols=65 Identities=15% Similarity=0.186 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 417 THSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~----~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
....+++++..++...+.++.+++++|+..-+++++.+... .++.+..+...+-.-++.|+++-.
T Consensus 36 ~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~EKe 104 (111)
T 2v66_B 36 QVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKE 104 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666777777777777778888888777777765544 677888888888887888876443
No 97
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=95.66 E-value=0.15 Score=38.37 Aligned_cols=35 Identities=9% Similarity=0.232 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhc
Q 010847 382 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNS 416 (499)
Q Consensus 382 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 416 (499)
++.-|+.+....++.+.....+..+|++++...+.
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~ 59 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKI 59 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36666666666666666666666666666555444
No 98
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.55 E-value=1.7 Score=44.49 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=65.7
Q ss_pred eEEEEcCCCCCcccCcEEEEEc-CCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDL-RSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~ 107 (499)
.||+.... ...++.||. .+++ |+.-...... .. ..+.......+.++.++.||+...
T Consensus 64 ~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 64 MMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDAS------TK--AVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp EEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG------GG--GGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred EEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCcc------cc--ccccccccccccEEECCEEEEEeC-------
Confidence 67766542 246999999 7765 8874432100 00 000000112234667899988643
Q ss_pred CceEEEEECCCC--cEEEeecCCCCCCC-CcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEe
Q 010847 108 SMIVRFIDLETN--LCGVMETSGKVPVA-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 175 (499)
Q Consensus 108 ~~~~~~yd~~t~--~W~~~~~~g~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~ 175 (499)
...++.+|..|+ .|+.... ..+.. ....+.++.++.+|+-.+... ......++.||..|++ |+.-
T Consensus 124 dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 124 NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAKDTVLMGCSGAE-LGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEEECBCGG-GTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEECCEEEEEecCCc-cCCCCEEEEEECCCCcEEEEEc
Confidence 234999999888 4875431 11111 111233456888877543211 1123579999998764 8654
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.54 E-value=1.3 Score=42.67 Aligned_cols=201 Identities=7% Similarity=-0.017 Sum_probs=94.1
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecC--CCCCCCCcceEEEEE--CC-EEEEEcCcCCCCCccCcEEEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS--GKVPVARGGHSVTLV--GS-RLIIFGGEDRSRKLLNDVHFLD 166 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~--g~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~v~~yd 166 (499)
++.+++.|+.+ ..+.+||..++........ ..+........++.+ ++ .+++.|+.+ ..+.+||
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWD 160 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEE
Confidence 45677777643 3488889887643110000 000001111222223 22 467777653 3589999
Q ss_pred CCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-
Q 010847 167 LETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI- 244 (499)
Q Consensus 167 ~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~- 244 (499)
+.+.+....-.... .......+.+ .++.+++.|+.+ ..+.+||+.+..-...-..+ ....+ ...++..
T Consensus 161 ~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 230 (402)
T 2aq5_A 161 VGTGAAVLTLGPDV---HPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRP-HEGTR-PVHAVFVS 230 (402)
T ss_dssp TTTTEEEEEECTTT---CCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECS-SCSSS-CCEEEECS
T ss_pred CCCCCccEEEecCC---CCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccC-CCCCc-ceEEEEcC
Confidence 98876543321001 1112223333 345466666644 46999999887643321001 11111 1223333
Q ss_pred CCEEEEEeCCCCCCCcceEEEEECCCCce-EEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 245 DENWYIVGGGDNNNGCQETIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 245 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~W-~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
++.++++|.... ....+.+||+.+..- ........ ...........+...|++.|+.++ .+.+||+.
T Consensus 231 ~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~g~~dg----~i~i~d~~ 298 (402)
T 2aq5_A 231 EGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDT------SSGVLLPFFDPDTNIVYLCGKGDS----SIRYFEIT 298 (402)
T ss_dssp TTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCC------CSSCEEEEEETTTTEEEEEETTCS----CEEEEEEC
T ss_pred CCcEEEEeccCC--CCceEEEEcCccccCCceEEeccC------CCceeEEEEcCCCCEEEEEEcCCC----eEEEEEec
Confidence 556666652111 123678889876432 11111111 011122233334457777776554 57777776
Q ss_pred CCC
Q 010847 324 PRD 326 (499)
Q Consensus 324 ~~~ 326 (499)
...
T Consensus 299 ~~~ 301 (402)
T 2aq5_A 299 SEA 301 (402)
T ss_dssp SST
T ss_pred CCC
Confidence 543
No 100
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.53 E-value=0.83 Score=43.35 Aligned_cols=185 Identities=12% Similarity=0.072 Sum_probs=89.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
+++.++.|+.++ .+.++|+.++.-...- ... .....++.+ +..+++.|+.+ ..+.++|+.
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~~~---~~h--~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLSSY---RAH--AAQVTCVAASPHKDSVFLSCSED------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE---CCC--SSCEEEEEECSSCTTEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE---cCc--CCceEEEEecCCCCCceeeeccc------ccccccccc
Confidence 466677776543 3889999887543322 111 111122222 23577777654 358899998
Q ss_pred CCeeEEeeecCCCCCCCccceEEEE--cCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-cccCCCCCCcCcccEEEEE-
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-PEIKGDLVTGRAGHAGITI- 244 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~- 244 (499)
+.+-...-. .........++.+ .++.+++.|+.+ ..|.+||+.+.+-.. +. + ....-.+++..
T Consensus 201 ~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~~~~~~~--~---h~~~v~~v~fsp 267 (344)
T 4gqb_B 201 CPKPASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTSCVLSSA--V---HSQCVTGLVFSP 267 (344)
T ss_dssp SSSCEEECC-------CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--CCEEEE--C---CSSCEEEEEECS
T ss_pred ccceeeeee---cceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCcEEEEEc--C---CCCCEEEEEEcc
Confidence 765432211 1111111222333 244577777654 358899987654211 11 1 01111122222
Q ss_pred CC-EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEEC
Q 010847 245 DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRL 322 (499)
Q Consensus 245 ~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~ 322 (499)
++ .+++.|+.+. .+.+||..+..-..+.. +......+... .+..|++.||.++ .+..+++
T Consensus 268 ~g~~~lasgs~D~-----~i~vwd~~~~~~~~~~~---------H~~~V~~v~~sp~~~~llas~s~D~----~v~~w~v 329 (344)
T 4gqb_B 268 HSVPFLASLSEDC-----SLAVLDSSLSELFRSQA---------HRDFVRDATWSPLNHSLLTTVGWDH----QVVHHVV 329 (344)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTCCEEEEECC---------CSSCEEEEEECSSSTTEEEEEETTS----CEEEEEC
T ss_pred CCCeEEEEEeCCC-----eEEEEECCCCcEEEEcC---------CCCCEEEEEEeCCCCeEEEEEcCCC----eEEEEEC
Confidence 23 4566666433 37788988775433211 11122233332 2345676777765 5666666
Q ss_pred CC
Q 010847 323 KP 324 (499)
Q Consensus 323 ~~ 324 (499)
..
T Consensus 330 ~~ 331 (344)
T 4gqb_B 330 PT 331 (344)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 101
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=95.53 E-value=0.2 Score=45.48 Aligned_cols=10 Identities=10% Similarity=0.232 Sum_probs=3.6
Q ss_pred hhhhhHHHHH
Q 010847 436 RSRCFKLEAQ 445 (499)
Q Consensus 436 ~~~~~~~~~~ 445 (499)
+.+...++.+
T Consensus 103 ~~~i~~lE~e 112 (256)
T 3na7_A 103 KERSNQANRE 112 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 102
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.53 E-value=1.7 Score=41.29 Aligned_cols=203 Identities=9% Similarity=-0.010 Sum_probs=96.8
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCE-EEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSR-LIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
...++++|+.++....+.. .+ ....+....- ++. |++... +........++.+|+.+..+..+.. ..+.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~---~~-~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ---DT-AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE----HAEG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE---ES-SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC----CCTT
T ss_pred cceEEEEECCCCcEEeecc---CC-cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec----cCCC
Confidence 3569999999988776652 11 1112222222 243 544432 2211123579999998887766542 1111
Q ss_pred ccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCC-------
Q 010847 186 YDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDN------- 256 (499)
Q Consensus 186 ~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~------- 256 (499)
.......+ .++..+++...........++++|+.++....+.. .+. .. ....- +++++++.+...
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MPP--CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CCS--EE-EEEECSSSSEEEEEECCC-------
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CCC--CC-CCccCCCCceEEEecCCcceeeccc
Confidence 11222233 34433333332212212349999998887766532 111 11 22222 556666544221
Q ss_pred ----CCCcceEEEEECCCCceEEeccCCCCC----CCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCCCC
Q 010847 257 ----NNGCQETIVLNMTKLAWSILTSVKGRN----PLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIP 328 (499)
Q Consensus 257 ----~~~~~~~~~~d~~~~~W~~l~~~~~~~----p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W~ 328 (499)
......++++|+.++....+....... ..............++ ..|+......+ ...+|.+++....+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~s~~~~--~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPND-DGVLFTSDFEG--VPAIYIADVPESYKH 388 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTS-SEEEEEECTTS--SCEEEEEECCTTCC-
T ss_pred cccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCC-CeEEEEecCCC--CceEEEEEEcccccc
Confidence 112357999999888766654332100 0000001111222333 35554443322 457999998766544
No 103
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.52 E-value=1 Score=47.48 Aligned_cols=110 Identities=11% Similarity=-0.010 Sum_probs=53.9
Q ss_pred cEEEEECCC-CeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCC-CcCcc
Q 010847 161 DVHFLDLET-MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV-TGRAG 238 (499)
Q Consensus 161 ~v~~yd~~t-~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p-~~r~~ 238 (499)
.++++|+.+ .+-..+... .+.......++. .|+..++++..+.......++++|+.++....+....... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 788889888 765554321 011111222333 4433344433322233467999999988776643211100 00001
Q ss_pred cEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEec
Q 010847 239 HAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 239 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
.....-++++++.++.+ ....+|.+|.... ...+.
T Consensus 341 ~~~~spdg~~~~~~~~~---g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERT---GFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCEECTTSCEEEEECTT---SSCEEEEECSSSC-EEESC
T ss_pred ceEECCCCeEEEEecCC---CccEEEEEcCCCC-eeeee
Confidence 11122245666555432 2457899987766 55553
No 104
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.51 E-value=0.56 Score=37.42 Aligned_cols=22 Identities=9% Similarity=0.287 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHh
Q 010847 459 IENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 459 ~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
+..+...++++...+..+++++
T Consensus 102 L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 102 LTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555443
No 105
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.51 E-value=1.5 Score=40.34 Aligned_cols=231 Identities=9% Similarity=0.005 Sum_probs=110.6
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-C-CEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G-TKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
..+.+||+.++++..+...... .....-++++.. + +.||+.... +.+++||+. ++..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~-------------~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVN-------------GYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GTFE 104 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEET-------------TEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SCEE
T ss_pred CEEEEEeCCCCcEEEEEecccC-------------CCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CCEE
Confidence 4689999999998765431000 001112233332 4 688887541 249999998 7776
Q ss_pred Ee-ecCCCCCCCCcceEEEE-ECCEEEEEcCcC---------CCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEE
Q 010847 123 VM-ETSGKVPVARGGHSVTL-VGSRLIIFGGED---------RSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAA 191 (499)
Q Consensus 123 ~~-~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~---------~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~ 191 (499)
.+ ...........-+.++. -+++||+..... ........+++||+. .+...+...... ...++
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~~~i~ 178 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF-----PNGIA 178 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS-----EEEEE
T ss_pred EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC-----cceEE
Confidence 55 32111111111122332 256788765432 111123578999886 555544321111 12333
Q ss_pred EE----cCc-EEEEEcCCCCCCCCCcEEEEECC-CCceEecccCCCCCCc--CcccEEEEE-CCEEEEEeCCCCCCCcce
Q 010847 192 LH----ANR-YLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTG--RAGHAGITI-DENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 192 ~~----~~~-~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~--r~~~~~~~~-~~~l~v~GG~~~~~~~~~ 262 (499)
.. .++ .+|+.... .+.+++||+. ++...........+.. ..-..++.. ++.+||.... .+.
T Consensus 179 ~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~ 248 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSH 248 (314)
T ss_dssp EEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTE
T ss_pred EecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCE
Confidence 33 444 56665432 2568999875 4443321110111111 111223332 4577776422 125
Q ss_pred EEEEECCCCce-EEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 263 TIVLNMTKLAW-SILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 263 ~~~~d~~~~~W-~~l~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+.+||+.+... ..+. .+. .....+..+ +...|++.+..+ ..+++|++...
T Consensus 249 i~~~d~~~g~~~~~~~-~~~--------~~~~~i~~~~dg~~l~v~~~~~----~~l~~~~~~~~ 300 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIR-CPF--------EKPSNLHFKPQTKTIFVTEHEN----NAVWKFEWQRN 300 (314)
T ss_dssp EEEECTTCBSCSEEEE-CSS--------SCEEEEEECTTSSEEEEEETTT----TEEEEEECSSC
T ss_pred EEEEcCCCCcEeEEEe-CCC--------CCceeEEECCCCCEEEEEeCCC----CeEEEEeCCCC
Confidence 88999885442 2221 111 112222333 334577655433 37899998653
No 106
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.50 E-value=0.11 Score=57.34 Aligned_cols=16 Identities=13% Similarity=0.437 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHhHHHH
Q 010847 458 TIENEVQILRQQKSAF 473 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~ 473 (499)
.|+++.+.+++|+..+
T Consensus 1027 ~L~~e~~~L~qq~~~l 1042 (1080)
T 2dfs_A 1027 ELKEQNTLLKTEKEEL 1042 (1080)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444433
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.49 E-value=1.6 Score=40.78 Aligned_cols=158 Identities=12% Similarity=0.113 Sum_probs=72.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++..++.|+.+ ..+.+||+.++....... .+.+ -.+++.. ++..++.++.+... ....+.+||+.+.
T Consensus 85 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~---~~~~--v~~~~~~~~~~~l~~~~~~~~~-~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 85 FTKYCVTGSAD------YSIKLWDVSNGQCVATWK---SPVP--VKRVEFSPCGNYFLAILDNVMK-NPGSINIYEIERD 152 (369)
T ss_dssp TSSEEEEEETT------TEEEEEETTTCCEEEEEE---CSSC--EEEEEECTTSSEEEEEECCBTT-BCCEEEEEEEEEC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEee---cCCC--eEEEEEccCCCEEEEecCCccC-CCCEEEEEEecCC
Confidence 35566666643 349999998887554431 1111 1122222 34455554433111 1346777776543
Q ss_pred e----eEEeeecC--C--CCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCC-CceEecccCCCCCCcCcccE
Q 010847 171 T----WDAVEVTQ--T--PPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHA 240 (499)
Q Consensus 171 ~----W~~~~~~~--~--~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~ 240 (499)
. +....... . .........++.+ .++.+++.|+.+ ..+.+||+.+ ..-...-. . ....-.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~-~---~~~~v~~ 223 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVDSID-L---HEKSISD 223 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEEEEE-C---CSSCEEE
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEEEEe-c---CCCceeE
Confidence 2 11111000 0 0001112223333 344466666643 3689999887 33222110 1 1111122
Q ss_pred EEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEE
Q 010847 241 GITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 241 ~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
++.. ++.++++|+.++ .+.+||+.+.....
T Consensus 224 ~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDT-----NSFLVDVSTLQVLK 254 (369)
T ss_dssp EEECTTSSEEEEEETTS-----EEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEecCCc-----eEEEEECCCCceee
Confidence 2222 455666665332 58899988766443
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.48 E-value=2.1 Score=41.95 Aligned_cols=146 Identities=10% Similarity=0.119 Sum_probs=74.4
Q ss_pred ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 142 VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 142 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
.++.+++.|+.+ ..+.+||+.+.+-...-. + ....-.+++...++..++.|+.+ +.+.+||+.+.
T Consensus 278 ~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~ 342 (464)
T 3v7d_B 278 GHGNIVVSGSYD------NTLIVWDVAQMKCLYILS-G---HTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENG 342 (464)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEEEC-C---CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTT
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEEec-C---CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCC
Confidence 344555666543 359999998766433221 1 11112223333344466666654 35999999876
Q ss_pred ceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCce
Q 010847 222 EWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH 301 (499)
Q Consensus 222 ~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~ 301 (499)
.-... ..........+..++..++.|+.++ .+.+||+.+..-....... ..........++ .
T Consensus 343 ~~~~~-----~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~-~ 404 (464)
T 3v7d_B 343 ELMYT-----LQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYHHT-------NLSAITTFYVSD-N 404 (464)
T ss_dssp EEEEE-----ECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEECT-------TCCCEEEEEECS-S
T ss_pred cEEEE-----EeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeecCC-------CCccEEEEEeCC-C
Confidence 53321 1111122234445667777776443 4788898776532211111 011222333333 2
Q ss_pred EEEEEcCCCCCCCceEEEEECCCCC
Q 010847 302 HLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 302 ~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
+++.|+ ++ .+.++|+...+
T Consensus 405 -~l~~~~-dg----~i~iwd~~~g~ 423 (464)
T 3v7d_B 405 -ILVSGS-EN----QFNIYNLRSGK 423 (464)
T ss_dssp -EEEEEE-TT----EEEEEETTTCC
T ss_pred -EEEEec-CC----eEEEEECCCCc
Confidence 455555 33 78899987653
No 109
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.48 E-value=1.8 Score=41.24 Aligned_cols=187 Identities=8% Similarity=0.012 Sum_probs=95.6
Q ss_pred EEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcc-eEEEEEC--CEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 94 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-HSVTLVG--SRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 94 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~-~~~~~~~--~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
.+++.|+.++ .+.+||+.+....... ........ .+++... +.+++.|+.+ ..+.++|+.+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceee---ecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 5777776533 3999999988776654 21111112 2333333 3666666643 35889999887
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE-E
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN-W 248 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-l 248 (499)
....+.... .....-.+++...++.+++.|+.+ ..+.+||+....-..+. + ....-.+++.. ++. +
T Consensus 152 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~---h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 152 VIQVFAKTD--SWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEK--L---HKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEECCC--CSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEE--C---SSSCEEEEEECSSCTTE
T ss_pred ceEEEeccC--CCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEec--c---CCCcEEEEEECCCCCCE
Confidence 666554311 111112233333455467777654 46899998544333331 1 11111122222 233 6
Q ss_pred EEEeCCCCCCCcceEEEEECCC----CceEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEcCCCCCCCceEEEEECC
Q 010847 249 YIVGGGDNNNGCQETIVLNMTK----LAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 249 ~v~GG~~~~~~~~~~~~~d~~~----~~W~~l~~~~~~~p~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
++.|+.++ .+.+||+.+ ........ . ......+.... +..+++.|+.++ .+.+||+.
T Consensus 220 l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~--~-------~~~v~~~~~s~~~~~~l~~~~~d~----~i~iwd~~ 281 (383)
T 3ei3_B 220 MATSSVDA-----TVKLWDLRNIKDKNSYIAEMP--H-------EKPVNAAYFNPTDSTKLLTTDQRN----EIRVYSSY 281 (383)
T ss_dssp EEEEETTS-----EEEEEEGGGCCSTTCEEEEEE--C-------SSCEEEEEECTTTSCEEEEEESSS----EEEEEETT
T ss_pred EEEEeCCC-----EEEEEeCCCCCcccceEEEec--C-------CCceEEEEEcCCCCCEEEEEcCCC----cEEEEECC
Confidence 77776432 478888876 33222111 1 11222333333 334555666554 68888876
Q ss_pred CC
Q 010847 324 PR 325 (499)
Q Consensus 324 ~~ 325 (499)
..
T Consensus 282 ~~ 283 (383)
T 3ei3_B 282 DW 283 (383)
T ss_dssp BT
T ss_pred CC
Confidence 54
No 110
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.42 E-value=1.9 Score=41.08 Aligned_cols=224 Identities=13% Similarity=0.170 Sum_probs=116.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 108 (499)
.||+... ...+++||+.+++ |+.-...... . ..........+.+..++.||+... .
T Consensus 55 ~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~v~v~~~-------~ 112 (376)
T 3q7m_A 55 VVYAADR------AGLVKALNADDGKEIWSVSLAEKDG-----W----FSKEPALLSGGVTVSGGHVYIGSE-------K 112 (376)
T ss_dssp EEEEECT------TSEEEEEETTTCCEEEEEECCC--------C----CSCCCCCEEEEEEEETTEEEEEET-------T
T ss_pred EEEEEcC------CCeEEEEEccCCceeeeecCccccc-----c----ccccCcccccCceEeCCEEEEEcC-------C
Confidence 6766543 1368999998775 6654321100 0 000012333455667889988543 2
Q ss_pred ceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEeeecCCCCC-
Q 010847 109 MIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPA- 183 (499)
Q Consensus 109 ~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~p~- 183 (499)
..++.||+.+++ |+.... . . ...+.+..++.+|+..+ ...++.||+.+++ |+.... ....
T Consensus 113 g~l~a~d~~tG~~~W~~~~~--~---~-~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~--~~~~~ 177 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVA--G---E-ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLD--MPSLS 177 (376)
T ss_dssp SEEEEEETTTCCEEEEEECS--S---C-CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC--C----
T ss_pred CEEEEEECCCCCEEEEEeCC--C---c-eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCC--CCcee
Confidence 359999998875 755431 1 1 12223455788877533 2369999998765 875432 1111
Q ss_pred CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEecccCCCCCCcC--------cccEEEEECCEEEEEeC
Q 010847 184 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGR--------AGHAGITIDENWYIVGG 253 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r--------~~~~~~~~~~~l~v~GG 253 (499)
.+...+.+.. ++.+|+ |..+ ..++.||+.+++ |+.... .|... .....+..++.+|+.+.
T Consensus 178 ~~~~~~~~~~-~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~ 247 (376)
T 3q7m_A 178 LRGESAPTTA-FGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRIS---QATGSTEIDRLSDVDTTPVVVNGVVFALAY 247 (376)
T ss_dssp -CCCCCCEEE-TTEEEE-CCTT-----TEEEEEETTTCCEEEEEECC---C-----------CCCCCCEEETTEEEEECT
T ss_pred ecCCCCcEEE-CCEEEE-EcCC-----CEEEEEECCCCcEEEEEecc---cCCCCcccccccccCCCcEEECCEEEEEec
Confidence 1111223333 664555 4322 369999998765 776321 11110 11233445777776542
Q ss_pred CCCCCCcceEEEEECCCCc--eEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 254 GDNNNGCQETIVLNMTKLA--WSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 254 ~~~~~~~~~~~~~d~~~~~--W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+ ..++.+|+.++. |..- .+. .......+ +.||+... + ..++.||..+.
T Consensus 248 -~-----g~l~~~d~~tG~~~w~~~--~~~----------~~~~~~~~-~~l~~~~~-~----g~l~~~d~~tG 297 (376)
T 3q7m_A 248 -N-----GNLTALDLRSGQIMWKRE--LGS----------VNDFIVDG-NRIYLVDQ-N----DRVMALTIDGG 297 (376)
T ss_dssp -T-----SCEEEEETTTCCEEEEEC--CCC----------EEEEEEET-TEEEEEET-T----CCEEEEETTTC
T ss_pred -C-----cEEEEEECCCCcEEeecc--CCC----------CCCceEEC-CEEEEEcC-C----CeEEEEECCCC
Confidence 1 258899987764 6642 110 11222333 35665432 2 26888887654
No 111
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.40 E-value=0.85 Score=46.47 Aligned_cols=194 Identities=15% Similarity=0.114 Sum_probs=95.0
Q ss_pred ceEEEEECCCCcEEEeecCCCC--------CCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecC
Q 010847 109 MIVRFIDLETNLCGVMETSGKV--------PVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ 179 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~--------p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 179 (499)
+.+.++|..+.+-...-....+ |.++....+... +..+|+... ..+.++.+|..+.+-..+...
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~------~~g~i~vvd~~~~~~l~~~~i- 320 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK------ETGKVLLVNYKDIDNLTVTSI- 320 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEECTTSSSCEEEEE-
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC------CCCeEEEEEecCCCcceeEEe-
Confidence 3488899888764433211111 222222222222 345555432 145799999877542221111
Q ss_pred CCCCCCccceEEEEcCc-EEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCC
Q 010847 180 TPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDN 256 (499)
Q Consensus 180 ~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 256 (499)
+..+.-+.++...++ ++|+.+.. .+.|.++|+.+++-...-..+..|.+..+... .. ++.+|+.+...+
T Consensus 321 --~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d 392 (543)
T 1nir_A 321 --GAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGD 392 (543)
T ss_dssp --ECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSS
T ss_pred --ccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCC
Confidence 112333334444344 45554322 35789999998875543222444444333222 23 256777654221
Q ss_pred CCCcceEEEEECCCC-----ceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCC--CCceEEEEECCCCC
Q 010847 257 NNGCQETIVLNMTKL-----AWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGK--YNNEVFVMRLKPRD 326 (499)
Q Consensus 257 ~~~~~~~~~~d~~~~-----~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~--~~~~~~~~~~~~~~ 326 (499)
+.+-++|+.+. .|+.+..++.... ......+..+..+|++-.-.+.. ....+.+||+.+.+
T Consensus 393 ----~~V~v~d~~~~~~~~~~~~~v~~l~~~g~-----~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 393 ----GSISLIGTDPKNHPQYAWKKVAELQGQGG-----GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp ----SEEEEEECCTTTCTTTBTSEEEEEECSCS-----CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred ----ceEEEEEeCCCCCchhcCeEEEEEEcCCC-----CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 25777887762 3776665543211 11222233334577763211111 24589999998765
No 112
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.38 E-value=1.7 Score=40.13 Aligned_cols=188 Identities=12% Similarity=0.071 Sum_probs=87.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.+ ..+.+||+.++.-...-. ..+ ....++.+ ++.+++.|+.+ ..+.++|+.+
T Consensus 66 ~~~~l~s~s~d------~~i~vwd~~~~~~~~~~~--~h~---~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~ 128 (304)
T 2ynn_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFE--AHP---DYIRSIAVHPTKPYVLSGSDD------LTVKLWNWEN 128 (304)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEE--CCS---SCEEEEEECSSSSEEEEEETT------SCEEEEEGGG
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEEEe--CCC---CcEEEEEEcCCCCEEEEECCC------CeEEEEECCC
Confidence 44556666643 348899998875432210 111 11122222 34566666654 3588888865
Q ss_pred CeeEEeeecCCCCCCCccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE---
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--- 244 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--- 244 (499)
.. ...... ........++.+. ++.+++.|+.+ ..+.+||+.+..-..... . ...+....+...
T Consensus 129 ~~-~~~~~~---~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~-~--~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 129 NW-ALEQTF---EGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLT-T--GQERGVNYVDYYPLP 196 (304)
T ss_dssp TT-EEEEEE---CCCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCSEEEE-C--CCTTCEEEEEECCST
T ss_pred Cc-chhhhh---cccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCccceec-c--CCcCcEEEEEEEEcC
Confidence 42 111111 0011112233342 44467777765 358888876543111000 0 001111111111
Q ss_pred CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 245 DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 245 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
++.+++.|+.+. .+.++|+.+..-. ..+... ......+....+..+++.|+.++ .+.++|+..
T Consensus 197 ~~~~l~s~s~D~-----~i~iWd~~~~~~~--~~~~~h------~~~v~~~~~~p~~~~l~s~s~Dg----~i~iWd~~~ 259 (304)
T 2ynn_A 197 DKPYMITASDDL-----TIKIWDYQTKSCV--ATLEGH------MSNVSFAVFHPTLPIIISGSEDG----TLKIWNSST 259 (304)
T ss_dssp TCCEEEEEETTS-----EEEEEETTTTEEE--EEEECC------SSCEEEEEECSSSSEEEEEETTS----CEEEEETTT
T ss_pred CCCEEEEEcCCC-----eEEEEeCCCCccc--eeeCCC------CCCEEEEEECCCCCEEEEEcCCC----eEEEEECCC
Confidence 345666666432 4778888776432 222111 11222333333333566677665 577788765
Q ss_pred C
Q 010847 325 R 325 (499)
Q Consensus 325 ~ 325 (499)
.
T Consensus 260 ~ 260 (304)
T 2ynn_A 260 Y 260 (304)
T ss_dssp C
T ss_pred C
Confidence 3
No 113
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.38 E-value=0.37 Score=51.71 Aligned_cols=174 Identities=10% Similarity=0.002 Sum_probs=93.1
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
+.+++||+.+++|......... ...+.... .++... ++.|++... . .+++||+.++.+ .
T Consensus 471 ~Gl~~~~~~~~~~~~~~~~~~~----------~~~~~~~i-~~i~~d~~g~lWigt~-~-------Gl~~~~~~~~~~-~ 530 (795)
T 4a2l_A 471 SALVRFNPEQRSFTTIEKEKDG----------TPVVSKQI-TTLFRDSHKRLWIGGE-E-------GLSVFKQEGLDI-Q 530 (795)
T ss_dssp SCEEEEETTTTEEEECCBCTTC----------CBCCCCCE-EEEEECTTCCEEEEES-S-------CEEEEEEETTEE-E
T ss_pred CceeEEeCCCCeEEEccccccc----------cccCCceE-EEEEECCCCCEEEEeC-C-------ceEEEeCCCCeE-E
Confidence 4588899999999877543100 00001111 222222 467776432 1 299999999888 5
Q ss_pred eecCCCCC-CCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEE
Q 010847 124 METSGKVP-VARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIV 200 (499)
Q Consensus 124 ~~~~g~~p-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v 200 (499)
.......+ .+-....++.. ++.|++... +.+++||+.+.++........+|... -.+++...++.|++
T Consensus 531 ~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi 601 (795)
T 4a2l_A 531 KASILPVSNVTKLFTNCIYEASNGIIWVGTR--------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWL 601 (795)
T ss_dssp ECCCSCSCGGGGSCEEEEEECTTSCEEEEES--------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCeeEEEEECCCCCEEEEeC--------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEE
Confidence 43110111 11111122222 467777432 24899999999988776443344332 23333334566777
Q ss_pred EcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcc-cEEEEECCEEEEEeCC
Q 010847 201 FGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG-HAGITIDENWYIVGGG 254 (499)
Q Consensus 201 ~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~~~~l~v~GG~ 254 (499)
.+. +-+.+||+.+.++........++...+. .+++...+.-+.|||.
T Consensus 602 ~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~ 649 (795)
T 4a2l_A 602 STN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI 649 (795)
T ss_dssp EET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET
T ss_pred EcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC
Confidence 553 3589999999998876543334444332 2334444434445553
No 114
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.32 E-value=1.9 Score=40.45 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=68.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
.+.+||+.++.-...- .... ....++.+ ++.+++.|+.+ ..+.++|+.+..-...-. + ....-
T Consensus 165 ~i~~wd~~~~~~~~~~---~~h~--~~v~~~~~~~~~~~l~sg~~d------~~v~~wd~~~~~~~~~~~-~---h~~~v 229 (340)
T 1got_B 165 TCALWDIETGQQTTTF---TGHT--GDVMSLSLAPDTRLFVSGACD------ASAKLWDVREGMCRQTFT-G---HESDI 229 (340)
T ss_dssp CEEEEETTTTEEEEEE---CCCS--SCEEEEEECTTSSEEEEEETT------SCEEEEETTTCSEEEEEC-C---CSSCE
T ss_pred cEEEEECCCCcEEEEE---cCCC--CceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeeEEEEc-C---CcCCE
Confidence 3889999888644322 1111 11122222 45677777754 358889987765332211 1 01111
Q ss_pred ceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEE
Q 010847 188 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIV 265 (499)
Q Consensus 188 ~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~ 265 (499)
.+++...++.+++.|+.+ ..+.+||+.+..-...- . .+........+.+ ++.+++.|+.++ .+.+
T Consensus 230 ~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~--~-~~~~~~~v~~~~~s~~g~~l~~g~~d~-----~i~v 296 (340)
T 1got_B 230 NAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTY--S-HDNIICGITSVSFSKSGRLLLAGYDDF-----NCNV 296 (340)
T ss_dssp EEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE--C-CTTCCSCEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred EEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEE--c-cCCcccceEEEEECCCCCEEEEECCCC-----eEEE
Confidence 222333355567777654 35889998776532211 1 1111112222222 456777766432 4788
Q ss_pred EECCCCc
Q 010847 266 LNMTKLA 272 (499)
Q Consensus 266 ~d~~~~~ 272 (499)
||..+..
T Consensus 297 wd~~~~~ 303 (340)
T 1got_B 297 WDALKAD 303 (340)
T ss_dssp EETTTCC
T ss_pred EEcccCc
Confidence 8876654
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.30 E-value=1.7 Score=42.21 Aligned_cols=226 Identities=15% Similarity=0.131 Sum_probs=101.7
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.+++.|+.+ ..+.+||+.+++-...... ......+...++.+++.|+.+ ..
T Consensus 160 ~~lasgs~D-----g~v~iWd~~~~~~~~~~~~------------------h~~~v~~~s~~~~~l~sgs~d------~~ 210 (420)
T 4gga_A 160 NYLAVGTSS-----AEVQLWDVQQQKRLRNMTS------------------HSARVGSLSWNSYILSSGSRS------GH 210 (420)
T ss_dssp SEEEEEETT-----SCEEEEETTTTEEEEEECC------------------CSSCEEEEEEETTEEEEEETT------SE
T ss_pred CEEEEEECC-----CeEEEEEcCCCcEEEEEeC------------------CCCceEEEeeCCCEEEEEeCC------Cc
Confidence 455555532 2478889888754332211 112233444566677777653 34
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEE--ECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEeeecCCCCCCCc
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAPRY 186 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~p~~r~ 186 (499)
+..+|..+.........+. ........ ..+..++.|+.+ +.+.+++..+.. +..+..... ...
T Consensus 211 i~~~d~~~~~~~~~~~~~h----~~~~~~~~~~~~g~~l~s~~~D------~~v~i~~~~~~~~~~~~~~~~~~---~~~ 277 (420)
T 4gga_A 211 IHHHDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLASGGND------NLVNVWPSAPGEGGWVPLQTFTQ---HQG 277 (420)
T ss_dssp EEEEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEEEETT------SCEEEEESSCCSSCSCCSEEECC---CSS
T ss_pred eeEeeecccceeeEEeccc----ccceeeeeecCCCCeeeeeecc------ccceEEeeccccccceeeeeecc---cCC
Confidence 7777776654332221111 11111222 234555555543 347777776543 111111001 111
Q ss_pred cceEEEE---cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcc
Q 010847 187 DHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 261 (499)
Q Consensus 187 ~~~~~~~---~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 261 (499)
...+..+ +...+++.||..+ ..|.+||+.++........ .....+++.. ++.+++.+|..+.
T Consensus 278 ~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~~~~~~-----~~~v~~~~~~~~~~~lv~~sg~~d~---- 344 (420)
T 4gga_A 278 AVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLSAVDA-----HSQVCSILWSPHYKELISGHGFAQN---- 344 (420)
T ss_dssp CEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEEEEEEC-----SSCEEEEEEETTTTEEEEEECTTTC----
T ss_pred ceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccceeecc-----ccceeeeeecCCCCeEEEEEecCCC----
Confidence 1112222 2343444444332 3588999988764442111 1111122222 3445555554332
Q ss_pred eEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 262 ETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 262 ~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
.+.+||..+.. .+..+.+. ......+....+..+++.||.++ .+.++|+.
T Consensus 345 ~I~iwd~~~~~--~v~~l~gH------~~~V~~l~~spdg~~l~S~s~D~----tvriWdv~ 394 (420)
T 4gga_A 345 QLVIWKYPTMA--KVAELKGH------TSRVLSLTMSPDGATVASAAADE----TLRLWRCF 394 (420)
T ss_dssp CEEEEETTTCC--EEEEECCC------SSCEEEEEECTTSSCEEEEETTT----EEEEECCS
T ss_pred EEEEEECCCCc--EEEEEcCC------CCCEEEEEEcCCCCEEEEEecCC----eEEEEECC
Confidence 47888987654 23333221 11222333333333555677665 56666653
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.22 E-value=1.3 Score=43.37 Aligned_cols=189 Identities=12% Similarity=0.138 Sum_probs=91.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE---CCEEEEEcccCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHYKKSSD 107 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~---~~~iyv~GG~~~~~~~ 107 (499)
.+++.|+.++ .|.+||+.++.-...-.... ......++.+ ++.+++.|+.++
T Consensus 133 ~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~g----------------H~~~V~~l~f~p~~~~~l~s~s~D~---- 187 (435)
T 4e54_B 133 STVAVGSKGG-----DIMLWNFGIKDKPTFIKGIG----------------AGGSITGLKFNPLNTNQFYASSMEG---- 187 (435)
T ss_dssp TCEEEEETTS-----CEEEECSSCCSCCEEECCCS----------------SSCCCCEEEECSSCTTEEEEECSSS----
T ss_pred CEEEEEeCCC-----EEEEEECCCCCceeEEEccC----------------CCCCEEEEEEeCCCCCEEEEEeCCC----
Confidence 4566666433 47888888766443332211 1111122232 455666676543
Q ss_pred CceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 108 SMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
.+.++|+.++....+.... .......++.. -++.+++.|+.+ ..+.++|+.+..-..+. ....
T Consensus 188 --~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~------~h~~ 251 (435)
T 4e54_B 188 --TTRLQDFKGNILRVFASSD--TINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLR------MHKK 251 (435)
T ss_dssp --CEEEEETTSCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSB------CCSS
T ss_pred --EEEEeeccCCceeEEeccC--CCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEe------cccc
Confidence 3888999887766554221 11111222222 256677777754 35888898654321111 1112
Q ss_pred cceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcce
Q 010847 187 DHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 187 ~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~ 262 (499)
....+.+. +..+++.|+.+ ..|.+||+.+..-..... ..... ...-..+.+ ++..++.|+.++ .
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~~~~~~~-~~~~h-~~~v~~~~~spdg~~l~s~~~D~-----~ 319 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVRGKASFL-YSLPH-RHPVNAACFSPDGARLLTTDQKS-----E 319 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCCSSSCCS-BCCBC-SSCEEECCBCTTSSEEEEEESSS-----C
T ss_pred eEEeeeecCCCceEEEEecCc-----ceeeEEecccccccceEE-Eeeec-cccccceeECCCCCeeEEEcCCC-----E
Confidence 22333332 33466666654 347788876654221100 00000 011111112 456666766443 3
Q ss_pred EEEEECCCCc
Q 010847 263 TIVLNMTKLA 272 (499)
Q Consensus 263 ~~~~d~~~~~ 272 (499)
+.+||+.+..
T Consensus 320 i~iwd~~~~~ 329 (435)
T 4e54_B 320 IRVYSASQWD 329 (435)
T ss_dssp EEEEESSSSS
T ss_pred EEEEECCCCc
Confidence 7788877653
No 117
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.19 E-value=1.8 Score=39.32 Aligned_cols=213 Identities=10% Similarity=-0.035 Sum_probs=106.5
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
.+..||+. +......... ....-++++.. ++.||+.... ...+++||+ ++.....
T Consensus 79 ~i~~~~~~-g~~~~~~~~~----------------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~ 134 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLPN----------------PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREY 134 (299)
T ss_dssp EEEEECTT-SCEEEEECSS----------------TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEE
T ss_pred eEEEECCC-CcEEEEeCCC----------------cCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEe
Confidence 48888886 5655544211 01222334443 4778886532 234999999 6666655
Q ss_pred ecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc-ceEEEEcCcEEEEEc
Q 010847 125 ETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD-HSAALHANRYLIVFG 202 (499)
Q Consensus 125 ~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~G 202 (499)
... .....-+.++.. +++||+... ..+.+++||+ +.+...... +..... ..++...++.+|+..
T Consensus 135 ~~~---~~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 135 ELP---NKGSYPSFITLGSDNALWFTEN------QNNAIGRITE-SGDITEFKI----PTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEET------TTTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEE
T ss_pred cCC---CCCCCCceEEEcCCCCEEEEeC------CCCEEEEEcC-CCcEEEeeC----CCCCCcceeEEECCCCCEEEEc
Confidence 421 111122233333 467887542 1346899998 777765532 111122 233333455577754
Q ss_pred CCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcc-cEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCC
Q 010847 203 GCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG-HAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~ 280 (499)
.. .+.+++||+ ++....+.. +..... ++++.. ++.+|+.... .+.+.+||+ +.....+....
T Consensus 201 ~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~ 264 (299)
T 2z2n_A 201 II-----GNKIGRITT-SGEITEFKI----PTPNARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYPIQI 264 (299)
T ss_dssp TT-----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEECSS
T ss_pred cC-----CceEEEECC-CCcEEEEEC----CCCCCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEeCCC
Confidence 32 246999998 777665421 111111 233332 4577776421 235889998 45544442211
Q ss_pred CCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 281 GRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 281 ~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
. ......+.. .+..|++... . +.+.+|++...
T Consensus 265 ~-------~~~~~~i~~-~~g~l~v~~~-~----~~l~~~~~~~~ 296 (299)
T 2z2n_A 265 K-------SAEPHGICF-DGETIWFAME-C----DKIGKLTLIKD 296 (299)
T ss_dssp S-------SCCEEEEEE-CSSCEEEEET-T----TEEEEEEEC--
T ss_pred C-------CCccceEEe-cCCCEEEEec-C----CcEEEEEcCcc
Confidence 0 111122222 3345665432 2 36888887654
No 118
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.19 E-value=0.1 Score=50.05 Aligned_cols=151 Identities=10% Similarity=-0.009 Sum_probs=69.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++ .+.+||+.++.|..+. .+........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 22 ~g~~l~~~~~d~------~i~iw~~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN------QVELYEQDGNGWKHAR---TFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS------CBCEEEEETTEEEECC---CBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC----
T ss_pred CCCEEEEecCCC------EEEEEEccCCceEEEE---EEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCC
Confidence 455666666432 3778888888887765 33222222233333 45666776643 3588889887
Q ss_pred Ce-eEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc-eEecccCCCCCCcCcccEEEEE-C
Q 010847 170 MT-WDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDLVTGRAGHAGITI-D 245 (499)
Q Consensus 170 ~~-W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~ 245 (499)
.. |........ .......+.+ .++.+++.|+.+ ..+.+||+.+.. |..+.... .+....-.+++.. +
T Consensus 87 ~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 87 DGTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPN 157 (377)
T ss_dssp --CCCCEEECCC---CSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTT
T ss_pred CCceeeeeEecc---cCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCC
Confidence 76 544332111 1122223333 344466666654 357888877654 33221101 1111112223332 4
Q ss_pred CEEEEEeCCCCCCCcceEEEEECCCC
Q 010847 246 ENWYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 246 ~~l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
+.+++.|+.++ .+.+||+.+.
T Consensus 158 ~~~l~~~~~d~-----~i~iwd~~~~ 178 (377)
T 3dwl_C 158 NVLLAAGCADR-----KAYVLSAYVR 178 (377)
T ss_dssp SSEEEEEESSS-----CEEEEEECCS
T ss_pred CCEEEEEeCCC-----EEEEEEEEec
Confidence 56777776543 3677776543
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.16 E-value=1.2 Score=41.87 Aligned_cols=108 Identities=8% Similarity=-0.079 Sum_probs=55.3
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++ .+.+||+.++.-...- ... .....++.+ ++..++.|+.+ ..+.+||+.+
T Consensus 43 ~~~~l~~~~~dg------~i~vwd~~~~~~~~~~---~~h--~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKDS------SASVWYSLNGERLGTL---DGH--TGTIWSIDVDCFTKYCVTGSAD------YSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESSS------CEEEEETTTCCEEEEE---CCC--SSCEEEEEECTTSSEEEEEETT------TEEEEEETTT
T ss_pred CCCEEEEEeCCC------EEEEEeCCCchhhhhh---hhc--CCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCC
Confidence 345666665432 3888998887644332 111 111222233 35566666643 3689999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
.+-...... ...-.++....++..++.++.+.......+.+||+.+.
T Consensus 106 ~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 106 GQCVATWKS-----PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp CCEEEEEEC-----SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CcEEEEeec-----CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 765443321 11122233333444555555432223356888877554
No 120
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=95.14 E-value=0.32 Score=36.02 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=25.9
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 406 RFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
.++.++..++.++...+.++..+...+..++.+....+.....++++|..+
T Consensus 9 ~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeL 59 (97)
T 2eqb_B 9 QLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 59 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444555555555555555555555555555555555554444
No 121
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.12 E-value=0.71 Score=43.17 Aligned_cols=159 Identities=13% Similarity=0.114 Sum_probs=77.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GS-RLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+|+.++. ...++++|+.+++...... .+....-+.++.. ++ .+|+.+.. .+.+++||+.+
T Consensus 10 ~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNY------PNNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEET------TTEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTT
T ss_pred CCEEEEEeCC------CCeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCC
Confidence 5678887764 3459999999987654332 1210011233332 33 57777542 34699999998
Q ss_pred CeeEEeeecCCCCC--CCccceEEEEcC-cEEEEEcCC---CCC---CCCCcEEEEECCCCceEecccCCCCCCcCcccE
Q 010847 170 MTWDAVEVTQTPPA--PRYDHSAALHAN-RYLIVFGGC---SHS---IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHA 240 (499)
Q Consensus 170 ~~W~~~~~~~~~p~--~r~~~~~~~~~~-~~l~v~GG~---~~~---~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~ 240 (499)
.+-......+..|. ...-+.++...+ +++|+.+.. ... ...+.+++||+.++.-....... +.++.-++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~ 152 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYL 152 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCC
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCcccc
Confidence 87543322111110 111123333334 445554411 000 01257999998874422211001 11222223
Q ss_pred EEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEE
Q 010847 241 GITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 241 ~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
++.. ++++|+.++ +++++|+.+..-..
T Consensus 153 ~~~s~dg~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 153 MRAADDGSLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp EEECTTSCEEEESS--------SEEEECTTTCCEEE
T ss_pred eeECCCCcEEEccC--------cEEEEeCCCCceec
Confidence 3332 455666422 38889988776443
No 122
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.11 E-value=0.71 Score=43.98 Aligned_cols=185 Identities=11% Similarity=0.052 Sum_probs=89.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
+++.++.|+.++ .+.++|+.++.-...- ... .....++.+ ++.+++.||.+ ..+.+||+.
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~---~~h--~~~v~~v~~s~~~~~~~~s~~~d------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSY---NAH--SSEVNCVAACPGKDTIFLSCGED------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEE---CCC--SSCEEEEEECTTCSSCEEEEETT------SCEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE---cCC--CCCEEEEEEccCCCceeeeeccC------CceEEEECC
Confidence 456667776533 3889999888644332 111 111222222 23467777654 248888887
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-- 244 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-- 244 (499)
+.+-.... ..........++.+. ++.+++.|+.+ ..|.+||+.+..-... ..........+.+
T Consensus 213 ~~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~~-----~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 213 KPKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQT-----SAVHSQNITGLAYSY 279 (357)
T ss_dssp SSSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCEE-----ECCCSSCEEEEEECS
T ss_pred CCceeeee---eeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeEE-----EeccceeEEEEEEcC
Confidence 76432211 111111222333332 34467777654 3588999876542211 0111111122222
Q ss_pred CC-EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEEC
Q 010847 245 DE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRL 322 (499)
Q Consensus 245 ~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~ 322 (499)
++ .+++.|+.+. .+.+||+.+...... +. +......+... .+..+++.||.++ .+.++++
T Consensus 280 ~~~~~lasgs~D~-----~i~iwd~~~~~~~~~--~~-------H~~~V~~vafsP~d~~~l~s~s~Dg----~v~iW~~ 341 (357)
T 4g56_B 280 HSSPFLASISEDC-----TVAVLDADFSEVFRD--LS-------HRDFVTGVAWSPLDHSKFTTVGWDH----KVLHHHL 341 (357)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTSCEEEEE--CC-------CSSCEEEEEECSSSTTEEEEEETTS----CEEEEEC
T ss_pred CCCCEEEEEeCCC-----EEEEEECCCCcEeEE--CC-------CCCCEEEEEEeCCCCCEEEEEcCCC----eEEEEEC
Confidence 23 5566665433 478889887754332 11 11122223332 1233566677765 5777776
Q ss_pred CC
Q 010847 323 KP 324 (499)
Q Consensus 323 ~~ 324 (499)
..
T Consensus 342 ~~ 343 (357)
T 4g56_B 342 PS 343 (357)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 123
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.10 E-value=2.2 Score=39.91 Aligned_cols=237 Identities=10% Similarity=-0.038 Sum_probs=119.7
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCC--cE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETN--LC 121 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W 121 (499)
+.+.++|+.+++......... -..-+.++.. ++.||+.... ...+.+||+... .-
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~----------------~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~ 126 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL----------------FYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPL 126 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT----------------CSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCS
T ss_pred CcEEEEECCCCeEEeccCCCc----------------cCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEE
Confidence 369999999888654322110 1112233332 5678887643 245999998665 22
Q ss_pred EEeecC---CCCCCCCcce-EEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCC----CCCCccceEE
Q 010847 122 GVMETS---GKVPVARGGH-SVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTP----PAPRYDHSAA 191 (499)
Q Consensus 122 ~~~~~~---g~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~----p~~r~~~~~~ 191 (499)
..+... |..+...... .+++. ++.||+..++. .+.|.+||.....-..+...+.. +........+
T Consensus 127 ~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gi 201 (329)
T 3fvz_A 127 LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSL 201 (329)
T ss_dssp EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEE
T ss_pred EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEE
Confidence 333211 1111112222 23333 57899987532 34689999654433333322211 1122223333
Q ss_pred EE-cC-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCC--CCCcceEEEEE
Q 010847 192 LH-AN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN--NNGCQETIVLN 267 (499)
Q Consensus 192 ~~-~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~--~~~~~~~~~~d 267 (499)
.+ .+ +.||+.... .+.|.+||+.+++....- ........-.+++...+.+|+..|... ......+.++|
T Consensus 202 a~d~~~g~l~v~d~~-----~~~I~~~~~~~G~~~~~~--~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 202 ALVPHLDQLCVADRE-----NGRIQCFKTDTKEFVREI--KHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp EEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEE--CCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE
T ss_pred EEECCCCEEEEEECC-----CCEEEEEECCCCcEEEEE--eccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE
Confidence 44 34 778887643 257999999866654421 111111122234444567777766422 22234688999
Q ss_pred CCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 268 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 268 ~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+.++.....-.... ... .....+.++.+..|||....++ .+++|++..
T Consensus 275 ~~~g~~~~~~~~~~----~~~-~~p~~ia~~~dG~lyvad~~~~----~I~~~~~~~ 322 (329)
T 3fvz_A 275 FSSGEIIDVFKPVR----KHF-DMPHDIVASEDGTVYIGDAHTN----TVWKFTLTE 322 (329)
T ss_dssp TTTCCEEEEECCSS----SCC-SSEEEEEECTTSEEEEEESSSC----CEEEEEEEE
T ss_pred cCCCeEEEEEcCCC----Ccc-CCeeEEEECCCCCEEEEECCCC----EEEEEeCCc
Confidence 88877654321100 011 1122334444447787665433 788888753
No 124
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.04 E-value=0.67 Score=48.96 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=33.6
Q ss_pred cEEEEECCC-CceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEec
Q 010847 212 DLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 212 ~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
.++++|+.+ ..-..+.. + .........++.-+++.++++..+......+++++|+.+.....+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~-~-~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDL-G-KEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEEECSSTTCCCEEECC-C-SCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCceEEecC-C-CCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 688889887 76554421 1 0111111112223334444443333334467999999998876653
No 125
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.03 E-value=2 Score=39.00 Aligned_cols=224 Identities=9% Similarity=-0.011 Sum_probs=114.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||+.... ...+.+||+. +.+....... ....-++++.. ++.||+.... ..
T Consensus 27 ~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~----------------~~~~~~~i~~~~~g~l~v~~~~------~~ 78 (299)
T 2z2n_A 27 KVWITQHK-----ANMISCINLD-GKITEYPLPT----------------PDAKVMCLTISSDGEVWFTENA------AN 78 (299)
T ss_dssp CEEEEETT-----TTEEEEECTT-CCEEEEECSS----------------TTCCEEEEEECTTSCEEEEETT------TT
T ss_pred CEEEEecC-----CCcEEEEcCC-CCeEEecCCc----------------ccCceeeEEECCCCCEEEeCCC------CC
Confidence 66665321 1358899998 7777655321 01122333332 5678876432 23
Q ss_pred eEEEEECCCCcEEEeecCCCCCC-CCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPV-ARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~-~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
.+++||+. +...... .|. ...-+.++.. ++.||+.... .+.+++||+ +.+........ ....-
T Consensus 79 ~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~---~~~~~ 143 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYT----LPNPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPN---KGSYP 143 (299)
T ss_dssp EEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSS---TTCCE
T ss_pred eEEEECCC-CcEEEEe----CCCcCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCC---CCCCC
Confidence 48999986 5555554 221 1122333333 4678886432 246889998 66665543211 11222
Q ss_pred ceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEE
Q 010847 188 HSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVL 266 (499)
Q Consensus 188 ~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~ 266 (499)
..++...++.+|+.... .+.+++||+ ++....+...... ..-.+++.. ++.+|+.... .+.+++|
T Consensus 144 ~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~-----~~~i~~~ 209 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPA---SGPVGITKGNDDALWFVEII-----GNKIGRI 209 (299)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT-----TTEEEEE
T ss_pred ceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCC---CcceeEEECCCCCEEEEccC-----CceEEEE
Confidence 33444445667775421 246999998 6766654211111 111233333 3567776432 2368899
Q ss_pred ECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 267 NMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 267 d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
|+ +.....+.. +. .......+..+.+..|++.... .+.+++||++
T Consensus 210 ~~-~g~~~~~~~-~~------~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~d~~ 254 (299)
T 2z2n_A 210 TT-SGEITEFKI-PT------PNARPHAITAGAGIDLWFTEWG----ANKIGRLTSN 254 (299)
T ss_dssp CT-TCCEEEEEC-SS------TTCCEEEEEECSTTCEEEEETT----TTEEEEEETT
T ss_pred CC-CCcEEEEEC-CC------CCCCceeEEECCCCCEEEeccC----CceEEEECCC
Confidence 99 776665422 11 0112223344433346664322 2368888873
No 126
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=94.97 E-value=0.35 Score=35.05 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=28.5
Q ss_pred HHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010847 411 IDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
++.++.+........++....+.....+..+.+..+..++++++ .++.+++.+..++......|+++
T Consensus 8 m~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq---~lE~eld~~ee~l~~a~~kLeea 74 (81)
T 1ic2_A 8 MQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLK---GTEDELDKYSESLKDAQEKLELA 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444444444444444444545444444433 23334444444444444444433
No 127
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.96 E-value=4.3 Score=42.57 Aligned_cols=125 Identities=11% Similarity=0.045 Sum_probs=68.3
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCC--CCC---CcceEEEEECCEEEEEcCcCCCCCcc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKV--PVA---RGGHSVTLVGSRLIIFGGEDRSRKLL 159 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~--p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~ 159 (499)
+.++.++.||+... ...++.+|..|++ |+.-...... +.. ....+.++.+++||+... .
T Consensus 65 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------d 130 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------D 130 (689)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------T
T ss_pred cCEEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------C
Confidence 34567999999765 2349999998874 8754311000 000 112234557888887542 2
Q ss_pred CcEEEEECCCCe--eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEec
Q 010847 160 NDVHFLDLETMT--WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 160 ~~v~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~ 226 (499)
..++.+|..|++ |+.-.............+.++. ++.+|+-.+.........++.||..|++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 369999998874 8765320110001111223334 5645553222111234579999998876 8763
No 128
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.93 E-value=3.8 Score=43.46 Aligned_cols=189 Identities=4% Similarity=-0.029 Sum_probs=95.8
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCC------
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLET------ 118 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t------ 118 (499)
.+.+||+.++++........ ....+...-+++... ++.|++. .... -+++||+.+
T Consensus 393 GL~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~i~~d~~g~lWig-T~~~------Gl~~~~~~~~~~~~~ 454 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDN-----------TGTYNTNWTYYIFEDTAGQLWIS-TCLG------GIFVVDKHKLMQSTS 454 (758)
T ss_dssp EEEEEETTTTEEEEEEEECC-----------C--CBSSSEEEEEECTTSEEEEE-ESSS------CEEEEEHHHHHHCCS
T ss_pred cHhhcCcCCCcEEEeecCCC-----------cCCCCCceEEEEEEcCCCCEEEE-ECCC------ceEEEccccccccCC
Confidence 58899999999987754211 000011122233332 4677773 2211 288888653
Q ss_pred CcEE---EeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc
Q 010847 119 NLCG---VMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA 194 (499)
Q Consensus 119 ~~W~---~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~ 194 (499)
..+. .......++... -++++. -++.|+++||.. +-+++||+.+.++..+... ..+....-.+++...
T Consensus 455 ~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~-~~~~~~~~~~i~~d~ 526 (758)
T 3ott_A 455 GQYIAEQNYSVHNGLSGMF-INQIIPDNEGNVWVLLYNN------KGIDKINPRTREVTKLFAD-ELTGEKSPNYLLCDE 526 (758)
T ss_dssp SEEECSEEECGGGTCSCSC-EEEEEECTTSCEEEEETTC------SSEEEEETTTTEEEEECTT-TSCGGGCEEEEEECT
T ss_pred cceecccccccccccccce-eeeEEEcCCCCEEEEccCC------CCcEEEeCCCCceEEecCC-CcCCCcccceEEECC
Confidence 2221 111111122211 112222 246899876643 3489999999998876421 111111122333334
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 195 NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 195 ~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
++.|++. .. +-+.+||+.+..+..... ..+|. ...++++.-++.|++... +-+.+||+.+....
T Consensus 527 ~g~lWig-t~------~Gl~~~~~~~~~~~~~~~-~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 527 DGLLWVG-FH------GGVMRINPKDESQQSISF-GSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDAR 590 (758)
T ss_dssp TSCEEEE-ET------TEEEEECC--CCCCBCCC-CC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEE
T ss_pred CCCEEEE-ec------CceEEEecCCCceEEecc-cCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeE
Confidence 5667753 22 248999998888776532 22332 222333334677777542 23789999988766
Q ss_pred Ee
Q 010847 275 IL 276 (499)
Q Consensus 275 ~l 276 (499)
..
T Consensus 591 ~~ 592 (758)
T 3ott_A 591 QQ 592 (758)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 129
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.84 E-value=1.1 Score=41.18 Aligned_cols=219 Identities=8% Similarity=0.028 Sum_probs=103.4
Q ss_pred ccccCCCCCeEEccc-----CCCCCC----ccc-ceEEEEcCCCCCcccCcEEEEEcCCCceEEe-eeCcccccCccccC
Q 010847 6 WHLELPYDLWVTLPV-----SGARPS----PRY-KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNL-RLETELDADKTEDS 74 (499)
Q Consensus 6 ~~~~~~~~~W~~~~~-----~~~~p~----~r~-~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~~~~~~ 74 (499)
+.||+..+++..+.. ....|. ... +.||+.... +.+++||+. ++...+ .....
T Consensus 49 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~--------- 112 (314)
T 1pjx_A 49 LRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSE--------- 112 (314)
T ss_dssp EEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTT---------
T ss_pred EEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCC---------
Confidence 567887888776543 101111 112 356665431 258999998 877655 32210
Q ss_pred CCCCCCCCccceeEEEE-CCEEEEEcccCC---------CCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--
Q 010847 75 GLLEVLPPMSDHCMVKW-GTKLLILGGHYK---------KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-- 142 (499)
Q Consensus 75 ~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~---------~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-- 142 (499)
..+ ...-+.++.. ++.||+...... .......+++||+. ++...+.. .... ...++..
T Consensus 113 ---~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~---~~~i~~~~~ 182 (314)
T 1pjx_A 113 ---GRR-MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQF---PNGIAVRHM 182 (314)
T ss_dssp ---SCB-CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESS---EEEEEEEEC
T ss_pred ---Ccc-ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCCC---cceEEEecc
Confidence 001 1112233332 567887654221 01112469999987 66655431 1111 1223333
Q ss_pred ---CC-EEEEEcCcCCCCCccCcEEEEECC-CCeeEEeeecCCCCCC--CccceEEEEcCcEEEEEcCCCCCCCCCcEEE
Q 010847 143 ---GS-RLIIFGGEDRSRKLLNDVHFLDLE-TMTWDAVEVTQTPPAP--RYDHSAALHANRYLIVFGGCSHSIFFNDLHV 215 (499)
Q Consensus 143 ---~~-~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~p~~--r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~ 215 (499)
++ .||+.... .+.+++||+. +.+..........+.. ..-..++...++.+|+.... .+.|.+
T Consensus 183 ~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~ 251 (314)
T 1pjx_A 183 NDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEV 251 (314)
T ss_dssp TTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEE
T ss_pred cCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEE
Confidence 23 56766432 3468899875 4544322211111211 11122333345667776422 146899
Q ss_pred EECCCCceE-ecccCCCCCCcCcccEEEEE-CCE-EEEEeCCCCCCCcceEEEEECCCC
Q 010847 216 LDLQTNEWS-QPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 216 ~d~~~~~W~-~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
||+.++... .+. .+. ..-.+++.. ++. +|+....+ +.+++|++...
T Consensus 252 ~d~~~g~~~~~~~----~~~-~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 252 FGPDGGQPKMRIR----CPF-EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp ECTTCBSCSEEEE----CSS-SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred EcCCCCcEeEEEe----CCC-CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 998755432 221 111 112223322 334 77665422 36888987653
No 130
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.83 E-value=2.8 Score=39.68 Aligned_cols=136 Identities=13% Similarity=0.017 Sum_probs=66.0
Q ss_pred cEEEEECCCCeeEEeeecCCCCCCCccceEEEE---cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCc
Q 010847 161 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH---ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRA 237 (499)
Q Consensus 161 ~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~---~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~ 237 (499)
.+.++|+.+.+-...-. +. .....++.+ .++.+++.|+.+ ..+.+||+.+......-. + ....
T Consensus 177 ~v~lwd~~~~~~~~~~~-~h----~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~~~~~~-~---h~~~ 242 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFH-GH----GADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQCVQAFE-T---HESD 242 (354)
T ss_dssp EEEEEETTTCCEEEEEE-CC----SSCEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCEEEEEC-C---CSSC
T ss_pred cEEEEeCCCCeEEEEEc-CC----CCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec-C---CCCC
Confidence 58889998876432211 11 111122222 133467777765 358899998876543210 0 0111
Q ss_pred ccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCce
Q 010847 238 GHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNE 316 (499)
Q Consensus 238 ~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 316 (499)
-.+++.. ++..++.|+.+. .+.+||+.+..-..+-.... .......+....+..+++.|+.++ .
T Consensus 243 v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~~g~~d~----~ 307 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSKES------IIFGASSVDFSLSGRLLFAGYNDY----T 307 (354)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTT------CCSCEEEEEECTTSSEEEEEETTS----C
T ss_pred eEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCC------cccceeEEEEeCCCCEEEEEECCC----c
Confidence 1122222 456777776543 37788887764322211110 011222333333334555666554 6
Q ss_pred EEEEECCCC
Q 010847 317 VFVMRLKPR 325 (499)
Q Consensus 317 ~~~~~~~~~ 325 (499)
+.+||+...
T Consensus 308 i~vwd~~~~ 316 (354)
T 2pbi_B 308 INVWDVLKG 316 (354)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 788887543
No 131
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=94.82 E-value=0.55 Score=35.68 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=18.9
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 453 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 453 (499)
++.++...+....+.+.++..++..++.++....+.+..+.+.+.+|
T Consensus 28 ~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kL 74 (101)
T 3u59_A 28 AEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKL 74 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344444444444444444443344444444433333
No 132
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.78 E-value=2.2 Score=39.88 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=57.7
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
+.+++.|+.+ ..+.+||+.++.-...-. ... ....++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~--~~~---~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYV--GHG---NAINELKFHPRDPNLLLSVSKD------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEE--SCC---SCEEEEEECSSCTTEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeec--CCC---CcEEEEEECCCCCCEEEEEeCC------CeEEEEEeec
Confidence 4677777753 348999988775433221 111 11222223 45677777653 3599999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
.+-...-. ...........+.+ .++..++.|+.+ +.+.+||+.+..
T Consensus 148 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 148 DTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp TEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred CeEEEEec--ccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 76543321 11112222233333 344466666654 368999987654
No 133
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.76 E-value=2.7 Score=40.33 Aligned_cols=151 Identities=17% Similarity=0.067 Sum_probs=74.9
Q ss_pred EEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 94 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 94 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
.+++.|+.++ .+.+||+.++.....-. .... .....++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 145 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVGTGAAVLTLG--PDVH-PDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEEC--TTTC-CSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTE
T ss_pred CEEEEEcCCC------EEEEEECCCCCccEEEe--cCCC-CCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCc
Confidence 4777776533 39999999886543321 0111 111222333 45666666643 369999998876
Q ss_pred eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce--EecccCCCCCCcCcccEEEEE-C-CE
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW--SQPEIKGDLVTGRAGHAGITI-D-EN 247 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W--~~~~~~~~~p~~r~~~~~~~~-~-~~ 247 (499)
-...-..+. .......++...++.+++.|... ..-..+.+||+.+..- .... ......-.+++.. + ..
T Consensus 210 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~ 281 (402)
T 2aq5_A 210 VVAEKDRPH--EGTRPVHAVFVSEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQE----LDTSSGVLLPFFDPDTNI 281 (402)
T ss_dssp EEEEEECSS--CSSSCCEEEECSTTEEEEEEECT--TCCEEEEEEETTBCSSCSEEEE----CCCCSSCEEEEEETTTTE
T ss_pred eeeeeccCC--CCCcceEEEEcCCCcEEEEeccC--CCCceEEEEcCccccCCceEEe----ccCCCceeEEEEcCCCCE
Confidence 433221111 11112334444567677766211 1124689999876432 1110 1111112223333 2 34
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCc
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
+++.|+.++ .+.+||+.+..
T Consensus 282 l~~~g~~dg-----~i~i~d~~~~~ 301 (402)
T 2aq5_A 282 VYLCGKGDS-----SIRYFEITSEA 301 (402)
T ss_dssp EEEEETTCS-----CEEEEEECSST
T ss_pred EEEEEcCCC-----eEEEEEecCCC
Confidence 556665332 47788877765
No 134
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.75 E-value=2.5 Score=39.16 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=51.3
Q ss_pred CCE-EEEEcccCCCCCCCceEEEEEC-CCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTK-LLILGGHYKKSSDSMIVRFIDL-ETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~-iyv~GG~~~~~~~~~~~~~yd~-~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++. +++.|+.++ .+.+||+ .++....+. ..+....-.+++...+.+++.|+.+ ..+.+||+.+
T Consensus 67 ~~~~~l~~~~~dg------~i~~wd~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQG------EILKVDLIGSPSFQALT---NNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETTS------CEEEECSSSSSSEEECB---SCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHH
T ss_pred CCCcEEEEEcCCC------eEEEEEeccCCceEecc---ccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccc
Confidence 556 666676432 3999999 888765543 2001111122222225555566543 3577887654
Q ss_pred Ce-------eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCC
Q 010847 170 MT-------WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT 220 (499)
Q Consensus 170 ~~-------W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~ 220 (499)
.. ...+. ....+ .....+.+..+. ++.|+.+ ..+.+||+.+
T Consensus 132 ~~~~~~~~~~~~~~---~~~~~-~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 132 YGDGVIAVKNLNSN---NTKVK-NKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp HTTBCEEEEESCSS---SSSSC-CCEEEEEECSSE-EEEEEST-----TEEEEEESSC
T ss_pred cccccccccCCeee---EEeeC-CceEEEEecCCc-EEEEeCC-----CeEEEEECCc
Confidence 00 11111 11111 122333444454 5555443 3689999877
No 135
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.71 E-value=2.8 Score=39.26 Aligned_cols=190 Identities=15% Similarity=0.084 Sum_probs=90.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
++.+++.||.+ ..+.+||+.+.. ....... ...... -.++.. -++. ++.|+.+ ..+.++|+.
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~-l~s~s~d------~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSREL-AGHTGY-LSCCRFLDDNQ-IVTSSGD------TTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEE-ECCSSC-EEEEEEEETTE-EEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEe-cCCCcc-EEEEEECCCCc-EEEEECC------CcEEEEECC
Confidence 45566677653 348888887653 1111100 001111 111222 2455 4444432 358899998
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
+..-...-. + ....-.+++...++.+++.|+.+ ..+.+||+.+..-...- .+ ....-.+++.. ++.
T Consensus 173 ~~~~~~~~~-~---h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~~~-~~---h~~~v~~v~~~p~~~ 239 (340)
T 1got_B 173 TGQQTTTFT-G---HTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQTF-TG---HESDINAICFFPNGN 239 (340)
T ss_dssp TTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEEE-CC---CSSCEEEEEECTTSS
T ss_pred CCcEEEEEc-C---CCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEEEE-cC---CcCCEEEEEEcCCCC
Confidence 876433221 1 11111223333455577777754 35889998776533211 01 01111122222 456
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.++.|+.++ .+.+||+.+..-...-.... .......+....+..+++.|+.++ .+.++|+..
T Consensus 240 ~l~s~s~d~-----~v~iwd~~~~~~~~~~~~~~------~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~ 301 (340)
T 1got_B 240 AFATGSDDA-----TCRLFDLRADQELMTYSHDN------IICGITSVSFSKSGRLLLAGYDDF----NCNVWDALK 301 (340)
T ss_dssp EEEEEETTS-----CEEEEETTTTEEEEEECCTT------CCSCEEEEEECTTSSEEEEEETTS----EEEEEETTT
T ss_pred EEEEEcCCC-----cEEEEECCCCcEEEEEccCC------cccceEEEEECCCCCEEEEECCCC----eEEEEEccc
Confidence 777776443 37788887764322111110 011223333433334566677654 688888754
No 136
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.69 E-value=4.6 Score=41.75 Aligned_cols=193 Identities=10% Similarity=-0.033 Sum_probs=96.7
Q ss_pred ceEEEEECCC------CcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCC--ccCcEEEEECC-CC---eeEEee
Q 010847 109 MIVRFIDLET------NLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRK--LLNDVHFLDLE-TM---TWDAVE 176 (499)
Q Consensus 109 ~~~~~yd~~t------~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~--~~~~v~~yd~~-t~---~W~~~~ 176 (499)
..++++|+.+ +....+...+ ..........-+++.+++........ ..++++++|+. +. ....+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDA---HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSC---SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecC---CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 5699999988 6655553011 11111112222444333333222111 13579999998 56 444443
Q ss_pred ecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCC-CCCCcCc---ccEEEEE-CCEEEEE
Q 010847 177 VTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKG-DLVTGRA---GHAGITI-DENWYIV 251 (499)
Q Consensus 177 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~-~~p~~r~---~~~~~~~-~~~l~v~ 251 (499)
.. ........+...|+.+|+.+..++ ...+|.+|+.++.+..+.... ....+.. ....+.. ++.+++.
T Consensus 238 ~~----~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 238 GG----PEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EE----TTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred CC----CCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 21 011122233333555666665432 347999999888888764211 0101111 1123333 5666666
Q ss_pred eCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEE-EEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 252 GGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSA-IIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 252 GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~-~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
+.. ....+|.+|+.+.....+.... .....+ ..+++..+++.++.+ ....+|.+|+....
T Consensus 311 ~~~----~~~~l~~~d~~~~~~~~l~~~~---------~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 311 HGK----GAAVLGILDPESGELVDAAGPW---------TEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGR 371 (662)
T ss_dssp EBS----SSCEEEEEETTTTEEEECCSSC---------CEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCC
T ss_pred EEc----CccEEEEEECCCCcEEEecCCC---------CeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCc
Confidence 543 3457899999888776664321 111222 445554555544432 23467888875543
No 137
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.68 E-value=3.6 Score=40.30 Aligned_cols=184 Identities=12% Similarity=0.075 Sum_probs=93.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.+++.|+.++ .+.+||+.+..-...- ..... .-.+++.. ++..++.|+.+ ..+.+||+.+.
T Consensus 279 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~---~~~~~-~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~ 342 (464)
T 3v7d_B 279 HGNIVVSGSYDN------TLIVWDVAQMKCLYIL---SGHTD-RIYSTIYDHERKRCISASMD------TTIRIWDLENG 342 (464)
T ss_dssp ETTEEEEEETTS------CEEEEETTTTEEEEEE---CCCSS-CEEEEEEETTTTEEEEEETT------SCEEEEETTTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEe---cCCCC-CEEEEEEcCCCCEEEEEeCC------CcEEEEECCCC
Confidence 445556666432 3999999887643332 11111 11222222 44566666643 35999999887
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYI 250 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v 250 (499)
+-...- ........++.+.++ .++.|+.+ +.+.+||+.+..-.... . ........+...++.+++
T Consensus 343 ~~~~~~-----~~h~~~v~~~~~~~~-~l~s~s~d-----g~v~vwd~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 343 ELMYTL-----QGHTALVGLLRLSDK-FLVSAAAD-----GSIRGWDANDYSRKFSY---H-HTNLSAITTFYVSDNILV 407 (464)
T ss_dssp EEEEEE-----CCCSSCEEEEEECSS-EEEEEETT-----SEEEEEETTTCCEEEEE---E-CTTCCCEEEEEECSSEEE
T ss_pred cEEEEE-----eCCCCcEEEEEEcCC-EEEEEeCC-----CcEEEEECCCCceeeee---c-CCCCccEEEEEeCCCEEE
Confidence 533221 112222344455555 56666654 35889998876532211 0 111122233444667777
Q ss_pred EeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEEC
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRL 322 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 322 (499)
.|+ + ..+.+||+.++.-......+. ......+..++ ..+++.|+.++ ..-++.+|+
T Consensus 408 ~~~-d-----g~i~iwd~~~g~~~~~~~~~~-------~~~v~~v~~~~-~~l~~~~~~~g--~~~i~~ldf 463 (464)
T 3v7d_B 408 SGS-E-----NQFNIYNLRSGKLVHANILKD-------ADQIWSVNFKG-KTLVAAVEKDG--QSFLEILDF 463 (464)
T ss_dssp EEE-T-----TEEEEEETTTCCEEESCTTTT-------CSEEEEEEEET-TEEEEEEEETT--EEEEEEEEC
T ss_pred Eec-C-----CeEEEEECCCCcEEehhhccC-------CCcEEEEEecC-CEEEEEEEeCC--eEEEEEeec
Confidence 765 2 258899998886543211111 12233334444 45666665544 234556664
No 138
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.67 E-value=3.3 Score=39.88 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=63.9
Q ss_pred CCCcccceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEccc
Q 010847 24 RPSPRYKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGH 101 (499)
Q Consensus 24 ~p~~r~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~ 101 (499)
.|.|-...+|+.-... ....+.+.++|+.+++-...-+.+ ...| ++.. +..+|+...+
T Consensus 39 ~~~pd~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG------------------~~P~-va~spDG~~lyVan~~ 98 (386)
T 3sjl_D 39 APAPDARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGG------------------FLPN-PVVADDGSFIAHASTV 98 (386)
T ss_dssp CCCCCTTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEEC------------------SSCE-EEECTTSSCEEEEEEE
T ss_pred ccCCCCCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECC------------------CCCc-EEECCCCCEEEEEccc
Confidence 3445555888875421 111358999999988754433322 1124 3333 4568887532
Q ss_pred CCC---CCCCceEEEEECCCCcEEEeecCCC---CCCCCcceEEEE--ECCEEEEEcCcCCCCCccCcEEEEECCCCee
Q 010847 102 YKK---SSDSMIVRFIDLETNLCGVMETSGK---VPVARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTW 172 (499)
Q Consensus 102 ~~~---~~~~~~~~~yd~~t~~W~~~~~~g~---~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 172 (499)
... +...+.+.++|+.+++-..--..+. ......-+.++. .+.++|+.... ..+.+.++|+.+++-
T Consensus 99 ~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 99 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp EEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-----SSCEEEEEETTTTEE
T ss_pred ccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-----CCCeEEEEECCCCcE
Confidence 110 0013569999999987543221111 001112222333 24578886321 135688888887754
No 139
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=94.67 E-value=0.6 Score=35.43 Aligned_cols=66 Identities=9% Similarity=0.184 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 010847 383 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAE 448 (499)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 448 (499)
+..|+.++............+...........+.++..+.+.++.++.++....+++......+.+
T Consensus 11 m~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~ 76 (101)
T 3u59_A 11 MQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQ 76 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444443333333334444444444444444444444554555544444444444444333
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.65 E-value=0.41 Score=43.35 Aligned_cols=182 Identities=7% Similarity=-0.009 Sum_probs=87.3
Q ss_pred ccccCCC-CCeEEcccCCC---CCCcccc---eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCC
Q 010847 6 WHLELPY-DLWVTLPVSGA---RPSPRYK---KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLE 78 (499)
Q Consensus 6 ~~~~~~~-~~W~~~~~~~~---~p~~r~~---~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ 78 (499)
+.+|+.. .+...+..... +....+. +.+++++.... ....++.+|+.++.-..+...
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~--------------- 128 (297)
T 2ojh_A 65 YRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKN--------------- 128 (297)
T ss_dssp EEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSS---------------
T ss_pred EEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecC---------------
Confidence 4556666 66655542211 1112221 44555543211 345788999887765444321
Q ss_pred CCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECC-EEEEEcCcCC
Q 010847 79 VLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGS-RLIIFGGEDR 154 (499)
Q Consensus 79 ~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~-~lyv~GG~~~ 154 (499)
.. .+.++.. +..|++.++... ...++.+|+.++....+. ..+.. . ..++. -++ .|++.+..+.
T Consensus 129 ---~~-~~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~---~~~~~-~-~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 129 ---LP-SYWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLT---HGEGR-N-DGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp ---SS-EEEEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECC---CSSSC-E-EEEEECTTSSEEEEEECTTS
T ss_pred ---CC-ccceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcc---cCCCc-c-ccceECCCCCEEEEEecCCC
Confidence 11 1222222 345665554332 234888888887766554 22211 1 12222 234 4555443332
Q ss_pred CCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCC------CCCcEEEEECCCCceEec
Q 010847 155 SRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSI------FFNDLHVLDLQTNEWSQP 226 (499)
Q Consensus 155 ~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~------~~~~i~~~d~~~~~W~~~ 226 (499)
...++.+++.+.....+... . .....+.+ .++..+++++..... ....++++|+.+.....+
T Consensus 196 ----~~~i~~~~~~~~~~~~~~~~-----~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 196 ----QMQIWRVRVDGSSVERITDS-----A-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp ----SCEEEEEETTSSCEEECCCC-----S-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred ----CccEEEECCCCCCcEEEecC-----C-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 34688888777666555321 1 11222233 344344444432211 124699999988776554
No 141
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.63 E-value=4.7 Score=41.45 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=65.8
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEEC-CCC--cEEEeecCCC--CCCCCc---ceEEEE--ECCE----EEEEcCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDL-ETN--LCGVMETSGK--VPVARG---GHSVTL--VGSR----LIIFGGE 152 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~--~W~~~~~~g~--~p~~r~---~~~~~~--~~~~----lyv~GG~ 152 (499)
+.++.++.||+.+.. ...++.+|. .++ .|+.-..... .+..++ ....++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 446679999998653 123999999 777 4876542110 010111 122344 4666 776432
Q ss_pred CCCCCccCcEEEEECCCCe--eEEeeecCCCCCC-CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEec
Q 010847 153 DRSRKLLNDVHFLDLETMT--WDAVEVTQTPPAP-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 153 ~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~ 226 (499)
...++.+|..|++ |+.-.. ..... ....+.++. ++.+|+-.+.........++.||..+++ |+.-
T Consensus 130 ------dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ------DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ------CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2369999998775 875421 10001 111122334 5645543221111123579999998876 8764
No 142
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.58 E-value=1.8 Score=41.50 Aligned_cols=196 Identities=14% Similarity=0.088 Sum_probs=92.4
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCc------EEEeecCCCCC-CCCcceEEEEE-C-CEEEEEcCcCCCCCccCcEE
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNL------CGVMETSGKVP-VARGGHSVTLV-G-SRLIIFGGEDRSRKLLNDVH 163 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~~~~~~g~~p-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~v~ 163 (499)
+.+++.|+.++ .+.+||+.+.. -.... .... ....-.+++.. + +.+++.|+.+ ..+.
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~ 191 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTP--GQSMSSVDEVISLAWNQSLAHVFASAGSS------NFAS 191 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCC--CCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEE
T ss_pred CCEEEEEcCCC------eEEEEECCCCcccccccccccc--ccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEE
Confidence 56777776532 38888987764 11110 0111 11111222322 2 4677777753 3599
Q ss_pred EEECCCCeeEEeeecCCCCCC-CccceEEEEc-C-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCC--CcCcc
Q 010847 164 FLDLETMTWDAVEVTQTPPAP-RYDHSAALHA-N-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLV--TGRAG 238 (499)
Q Consensus 164 ~yd~~t~~W~~~~~~~~~p~~-r~~~~~~~~~-~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p--~~r~~ 238 (499)
+||+.+.+-...-........ ......+.+. + ..+++.|+.++. ...+.+||+.+..-.. .... ....-
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~~~----~~~~~~~~~~v 265 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANTPL----QTLNQGHQKGI 265 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTSCS----BCCCSCCSSCE
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCCCc----EEeecCccCce
Confidence 999988765433221000000 2222333333 3 246666665421 1268889987643111 0111 11111
Q ss_pred cEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCce-EEEEEcCCCCCCCc
Q 010847 239 HAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEH-HLVAFGGYNGKYNN 315 (499)
Q Consensus 239 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~ 315 (499)
.+++.. ++.+++.|+.++ .+.+||+.+..-... +.... .....+....+. .+++.|+.++
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~--~~~~~------~~v~~~~~s~~~~~~l~s~~~d~---- 328 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLSQ--FPARG------NWCFKTKFAPEAPDLFACASFDN---- 328 (416)
T ss_dssp EEEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEEE--EECSS------SCCCCEEECTTCTTEEEECCSSS----
T ss_pred eEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCcccee--ecCCC------CceEEEEECCCCCCEEEEEecCC----
Confidence 223332 456777776432 478889877653321 11110 011112222222 4666777665
Q ss_pred eEEEEECCCC
Q 010847 316 EVFVMRLKPR 325 (499)
Q Consensus 316 ~~~~~~~~~~ 325 (499)
.+.+|++...
T Consensus 329 ~i~iw~~~~~ 338 (416)
T 2pm9_A 329 KIEVQTLQNL 338 (416)
T ss_dssp EEEEEESCCC
T ss_pred cEEEEEccCC
Confidence 6788888654
No 143
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.56 E-value=3.1 Score=39.08 Aligned_cols=153 Identities=10% Similarity=0.160 Sum_probs=80.0
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+++.||.+ ..+.+||..++.|........ ........+.+ ++.+++.|+.+.
T Consensus 29 ~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~---------------~h~~~v~~~~~sp~g~~l~s~s~D~----- 83 (345)
T 3fm0_A 29 TLLASCGGD-----RRIRIWGTEGDSWICKSVLSE---------------GHQRTVRKVAWSPCGNYLASASFDA----- 83 (345)
T ss_dssp SCEEEEETT-----SCEEEEEEETTEEEEEEEECS---------------SCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CEEEEEcCC-----CeEEEEEcCCCcceeeeeecc---------------ccCCcEEEEEECCCCCEEEEEECCC-----
Confidence 566677643 247888998888865433211 01112223333 456667776543
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCe-eEEeeecCCCCCCC
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAPR 185 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p~~r 185 (499)
.+.++|..+..+..+.+ +........++.+ ++.+++.|+.+ ..+.++|+.+.. +..+..... ..
T Consensus 84 -~v~iw~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~---h~ 150 (345)
T 3fm0_A 84 -TTCIWKKNQDDFECVTT---LEGHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNS---HT 150 (345)
T ss_dssp -CEEEEEECCC-EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECC---CC
T ss_pred -cEEEEEccCCCeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecC---cC
Confidence 37778877777665542 1111111222333 45677777654 358888886643 333332111 11
Q ss_pred ccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEec
Q 010847 186 YDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 226 (499)
Q Consensus 186 ~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 226 (499)
.....+.+ .++.+++.|+.+ ..+.+||..+..|..+
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d-----~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYD-----DTVKLYREEEDDWVCC 187 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETT-----SCEEEEEEETTEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCC-----CcEEEEEecCCCEEEE
Confidence 11222333 345467777654 3588888888877643
No 144
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.55 E-value=5.3 Score=41.71 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=68.4
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCC--CC---CCcceEEEEECCEEEEEcCcCCCCCcc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKV--PV---ARGGHSVTLVGSRLIIFGGEDRSRKLL 159 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~--p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~ 159 (499)
+.++.++.||+... ...++.+|..|++ |+.-...... +. .....+.++.+++||+... .
T Consensus 61 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------d 126 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------D 126 (668)
T ss_dssp CCEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------T
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------C
Confidence 34567999999865 2359999988874 8764311000 00 0112234556888887532 2
Q ss_pred CcEEEEECCCCe--eEEeeecCCCCC-CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEec
Q 010847 160 NDVHFLDLETMT--WDAVEVTQTPPA-PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 160 ~~v~~yd~~t~~--W~~~~~~~~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~ 226 (499)
..++.+|..|++ |+.-.. ..+. .....+.++. ++.+|+..+.........++.||+.+++ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTT--DPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECS--CTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccC--CCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 469999998874 876432 1111 1111222334 5655553222111234579999998876 8763
No 145
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.54 E-value=2.6 Score=38.14 Aligned_cols=224 Identities=8% Similarity=-0.039 Sum_probs=113.4
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||+.... ...+.+||+. +.......... ...-++++.. ++.||+.... ..
T Consensus 32 ~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~----------------~~~~~~i~~~~~g~l~v~~~~------~~ 83 (300)
T 2qc5_A 32 KVWFTQHK-----ANKISSLDQS-GRIKEFEVPTP----------------DAKVMCLIVSSLGDIWFTENG------AN 83 (300)
T ss_dssp CEEEEETT-----TTEEEEECTT-SCEEEEECSST----------------TCCEEEEEECTTSCEEEEETT------TT
T ss_pred CEEEEcCC-----CCeEEEECCC-CceEEEECCCC----------------CCcceeEEECCCCCEEEEecC------CC
Confidence 67775431 2358899988 77776543210 1122333333 4678876432 23
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 188 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 188 (499)
.+.+||+. +.+...... .....-+.++.. ++.||+.... .+.++.||+. .+........ ....-+
T Consensus 84 ~v~~~d~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~---~~~~~~ 149 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLP---QPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDLPN---KGSYPA 149 (300)
T ss_dssp EEEEECTT-SCEEEEECS---STTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEECSS---TTCCEE
T ss_pred eEEEECCC-CCeEEecCC---CCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccCCC---CCCCce
Confidence 49999988 777655421 111222333333 5678876432 2468899987 6665443211 111223
Q ss_pred eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCccc-EEEEE-CCEEEEEeCCCCCCCcceEEEE
Q 010847 189 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH-AGITI-DENWYIVGGGDNNNGCQETIVL 266 (499)
Q Consensus 189 ~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~-~~~~~-~~~l~v~GG~~~~~~~~~~~~~ 266 (499)
.++...++.+|+.... .+.+++||+ ++....+.. +...... +++.. ++.+|+.... .+.+++|
T Consensus 150 ~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~ 214 (300)
T 2qc5_A 150 FITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGALWFVEIM-----GNKIGRI 214 (300)
T ss_dssp EEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT-----TTEEEEE
T ss_pred eEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCEEEEccC-----CCEEEEE
Confidence 3333345557775422 246899998 666655421 1111122 23332 4577776431 2358899
Q ss_pred ECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 267 NMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 267 d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
|+ +..+........ ......+..+.+..|++.... .+.+.+|+++
T Consensus 215 ~~-~g~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~~ 259 (300)
T 2qc5_A 215 TT-TGEISEYDIPTP-------NARPHAITAGKNSEIWFTEWG----ANQIGRITND 259 (300)
T ss_dssp CT-TCCEEEEECSST-------TCCEEEEEECSTTCEEEEETT----TTEEEEECTT
T ss_pred cC-CCcEEEEECCCC-------CCCceEEEECCCCCEEEeccC----CCeEEEECCC
Confidence 98 555555432110 111223344433346665422 2367788873
No 146
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.46 E-value=2.6 Score=37.69 Aligned_cols=226 Identities=11% Similarity=0.008 Sum_probs=106.9
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||+.+... ...+.+||+.+.......... ...-++++.. ++.||+... . .
T Consensus 36 ~l~v~~~~~----~~~i~~~~~~~~~~~~~~~~~-----------------~~~p~~i~~~~~g~l~v~~~-~------~ 87 (270)
T 1rwi_B 36 NVYVTSEGM----YGRVVKLATGSTGTTVLPFNG-----------------LYQPQGLAVDGAGTVYVTDF-N------N 87 (270)
T ss_dssp CEEEEECSS----SCEEEEECC-----EECCCCS-----------------CCSCCCEEECTTCCEEEEET-T------T
T ss_pred CEEEEccCC----CCcEEEecCCCcccceEeeCC-----------------cCCcceeEECCCCCEEEEcC-C------C
Confidence 777723211 235788888776554432211 0112233333 467887754 1 2
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 188 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 188 (499)
.+++||+.+........ .....-+.++.. +++||+.... .+.+++|+..+......... . ...-.
T Consensus 88 ~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~-~---~~~p~ 153 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFT-G---LNDPD 153 (270)
T ss_dssp EEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCC-S---CCSCC
T ss_pred EEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccc-c---CCCce
Confidence 49999988776544421 111111233332 4678876432 34688887766544332211 1 11112
Q ss_pred eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEE
Q 010847 189 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLN 267 (499)
Q Consensus 189 ~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d 267 (499)
.++...++.+|+.... .+.+++||+.+..-..... ... ..-.+++.. ++.+|+....+ +.+.+||
T Consensus 154 ~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~-~~~---~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~ 219 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPF-TDI---TAPWGIAVDEAGTVYVTEHNT-----NQVVKLL 219 (270)
T ss_dssp CEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCC-SSC---CSEEEEEECTTCCEEEEETTT-----SCEEEEC
T ss_pred eEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecc-cCC---CCceEEEECCCCCEEEEECCC-----CcEEEEc
Confidence 3444445567776532 2468999987765433211 111 111233333 34788775422 3588899
Q ss_pred CCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 268 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 268 ~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+....-..+.... . .....+.++.+..||+....+ +.+.+|++..
T Consensus 220 ~~~~~~~~~~~~~-------~-~~p~~i~~~~~g~l~v~~~~~----~~v~~~~~~~ 264 (270)
T 1rwi_B 220 AGSTTSTVLPFTG-------L-NTPLAVAVDSDRTVYVADRGN----DRVVKLTSLE 264 (270)
T ss_dssp TTCSCCEECCCCS-------C-SCEEEEEECTTCCEEEEEGGG----TEEEEECCCG
T ss_pred CCCCcceeeccCC-------C-CCceeEEECCCCCEEEEECCC----CEEEEEcCCC
Confidence 8765433321100 0 112233343333466655433 3677777654
No 147
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.46 E-value=2.3 Score=40.69 Aligned_cols=156 Identities=9% Similarity=0.041 Sum_probs=71.9
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCC--cEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++.+++.|+.++ .+.+||+.+. ....+........ .-.++... ++.+++.|+.+ ..+.+||+
T Consensus 78 ~~~~l~~~~~dg------~v~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~d------g~v~iwd~ 143 (416)
T 2pm9_A 78 NNKIIAGALDNG------SLELYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDNVLASGGNN------GEIFIWDM 143 (416)
T ss_dssp SSSCEEEEESSS------CEEEECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTTBEEEECSS------SCEEBCBT
T ss_pred CCCeEEEEccCC------eEEEeecccccccccchhhccCCcc--ceEEEEEcCCCCCEEEEEcCC------CeEEEEEC
Confidence 455666666432 3888888771 1112221101111 11222222 25677777754 35888888
Q ss_pred CCCe------eEEeeecCCCCCCCccceEEEE-cC-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCC---cC
Q 010847 168 ETMT------WDAVEVTQTPPAPRYDHSAALH-AN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT---GR 236 (499)
Q Consensus 168 ~t~~------W~~~~~~~~~p~~r~~~~~~~~-~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~---~r 236 (499)
.+.. -. ... ............+.+ .+ +.+++.|+.+ ..+.+||+.+......-. ...+. ..
T Consensus 144 ~~~~~~~~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~-~~~~~~~~~~ 215 (416)
T 2pm9_A 144 NKCTESPSNYTP-LTP-GQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLS-YTSPNSGIKQ 215 (416)
T ss_dssp TTTSSCTTTCCC-BCC-CCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEEC-CCCCSSCCCC
T ss_pred CCCccccccccc-ccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEe-ccccccccCC
Confidence 7764 11 110 001111112222333 33 4577777654 359999998876443211 11000 11
Q ss_pred cccEEEEEC--CEEEEEeCCCCCCCcceEEEEECCCC
Q 010847 237 AGHAGITID--ENWYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 237 ~~~~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
.-.+++... ..+++.|+.+.. ...+.+||+.+.
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred ceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 122233332 247777764431 114677887764
No 148
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.44 E-value=4.6 Score=40.94 Aligned_cols=233 Identities=15% Similarity=0.089 Sum_probs=109.2
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+|+.+.. .+.+.++|..+++-...-... ..-|+++.. +..||+.+. .
T Consensus 150 ~~~vs~~~-----d~~V~v~D~~t~~~~~~i~~g------------------~~~~~v~~spdg~~l~v~~~-d------ 199 (543)
T 1nir_A 150 LFSVTLRD-----AGQIALVDGDSKKIVKVIDTG------------------YAVHISRMSASGRYLLVIGR-D------ 199 (543)
T ss_dssp EEEEEEGG-----GTEEEEEETTTCCEEEEEECS------------------TTEEEEEECTTSCEEEEEET-T------
T ss_pred EEEEEEcC-----CCeEEEEECCCceEEEEEecC------------------cccceEEECCCCCEEEEECC-C------
Confidence 77777653 246888999988754332221 113444333 456666553 1
Q ss_pred ceEEEEEC--CCCcEEEeecCCCCCCCCcceEEEEE-----CC-EEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCC
Q 010847 109 MIVRFIDL--ETNLCGVMETSGKVPVARGGHSVTLV-----GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 180 (499)
Q Consensus 109 ~~~~~yd~--~t~~W~~~~~~g~~p~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 180 (499)
+.+.+||+ .+.+-...- +....-..++.. ++ .||+ ++.. .+.+.++|..+.+-...-....
T Consensus 200 ~~V~v~D~~~~t~~~~~~i-----~~g~~p~~va~sp~~~~dg~~l~v-~~~~-----~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEI-----KIGIEARSVESSKFKGYEDRYTIA-GAYW-----PPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp SEEEEEETTSSSCEEEEEE-----ECCSEEEEEEECCSTTCTTTEEEE-EEEE-----SSEEEEEETTTCCEEEEEECCE
T ss_pred CeEEEEECcCCCCcEEEEE-----ecCCCcceEEeCCCcCCCCCEEEE-EEcc-----CCeEEEEeccccccceeecccC
Confidence 45999999 666532221 111222233332 44 4554 3332 3468899988876433322111
Q ss_pred C--------CCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE-EEE
Q 010847 181 P--------PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN-WYI 250 (499)
Q Consensus 181 ~--------p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-l~v 250 (499)
+ |.++-........+..+|+.... .+.|+++|..+..-..+.. .+..+.-|.++.. +++ +|+
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~---i~~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTS---IGAAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEE---EECCSSCCCEEECTTSCEEEE
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEE---eccCcCccCceECCCCCEEEE
Confidence 0 11222222222224545544322 3579999987653211111 1112333333333 344 444
Q ss_pred EeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.+.. .+.+.++|+.+++-....... ..|-+ +.... +...+...+++.+... ...+-++|+..
T Consensus 341 a~~~-----~~~v~v~D~~tg~l~~~i~~g-~~ph~--g~g~~-~~~p~~g~~~~s~~~~---d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANN-----SNKVAVIDSKDRRLSALVDVG-KTPHP--GRGAN-FVHPKYGPVWSTSHLG---DGSISLIGTDP 402 (543)
T ss_dssp EEGG-----GTEEEEEETTTTEEEEEEECS-SSBCC--TTCEE-EEETTTEEEEEEEBSS---SSEEEEEECCT
T ss_pred EecC-----CCeEEEEECCCCeEEEeeccC-CCCCC--CCCcc-cCCCCCccEEEeccCC---CceEEEEEeCC
Confidence 4321 236788999988654432211 11111 11122 2222324566665422 12577777755
No 149
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=94.44 E-value=0.43 Score=35.98 Aligned_cols=32 Identities=3% Similarity=0.130 Sum_probs=16.9
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHHHh
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLVAE 435 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (499)
...|...+...++.+.+...++.+++++..+.
T Consensus 26 i~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~ 57 (110)
T 2v4h_A 26 LEDLRQQLQQAEEALVAKQELIDKLKEEAEQH 57 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555544443
No 150
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.44 E-value=4.7 Score=41.32 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=62.7
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 108 (499)
.||+.... +.++.||..+++ |+.-...... ..+.......+.++.++.||+... .
T Consensus 70 ~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~----------~~~~~~~~~~g~a~~~~~v~~~t~-------d 126 (582)
T 1flg_A 70 VIYVTASY------SRLFALDAKTGKRLWTYNHRLPDD----------IRPCCDVVNRGAAIYGDKVFFGTL-------D 126 (582)
T ss_dssp EEEEEETT------TEEEEEESSSCCEEEEEECCCCTT----------CCCSSCSCCCCCEEETTEEEEEET-------T
T ss_pred EEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcc----------cccccccCCCccEEECCEEEEEeC-------C
Confidence 67766542 249999998875 8875432210 000000011234567899887532 2
Q ss_pred ceEEEEECCCCc--EEEeecCCCCCCC-CcceEEEEECC------EEEEEcCcCCCCCccCcEEEEECCCCe--eEEe
Q 010847 109 MIVRFIDLETNL--CGVMETSGKVPVA-RGGHSVTLVGS------RLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 175 (499)
Q Consensus 109 ~~~~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~------~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~ 175 (499)
..++.+|..|++ |+.... ..... ....+-++.++ .|| +|...........++.||+.|++ |+..
T Consensus 127 g~l~AlD~~TG~~~W~~~~~--~~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKKFA--DHGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp TEEEEEESSSCCEEEEEECS--CGGGTCBCCSCCEEEECTTTCCEEEE-ECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCC--CCCcCcccccCCEEeCCCcCCcEEEE-EeccccccCCCCEEEEEECCCCCEEeecC
Confidence 349999998885 875431 11100 01112233445 454 44432111124579999998764 8653
No 151
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.43 E-value=5.6 Score=41.51 Aligned_cols=149 Identities=10% Similarity=0.050 Sum_probs=72.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC--C--EEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG--S--RLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~--~--~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++..++.|+.+. .+.++|.....-..+.. .....+....++.+. + .+++.|+.+ ..+.++|+
T Consensus 483 ~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~ 548 (694)
T 3dm0_A 483 DNRQIVSASRDR------TIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNL 548 (694)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEET
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEEC
Confidence 455566666433 37888876543222221 111112222333332 2 355666543 35889998
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECC
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDE 246 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 246 (499)
.+.+-...-. + ......++.+ .++.+++.|+.+ ..|.++|+.+..-... ......-++++...+
T Consensus 549 ~~~~~~~~~~-~----h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 549 SNCKLRSTLA-G----HTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGKKLYS-----LEANSVIHALCFSPN 613 (694)
T ss_dssp TTCCEEEEEC-C----CSSCEEEEEECTTSSEEEEEETT-----SBCEEEETTTTEEEEC-----CBCSSCEEEEEECSS
T ss_pred CCCcEEEEEc-C----CCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCceEEE-----ecCCCcEEEEEEcCC
Confidence 8765432211 1 1112222333 355577777754 3588899887653221 111122234444444
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
..+++++.+ ..+.+||+.+..-.
T Consensus 614 ~~~l~~~~~-----~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 614 RYWLCAATE-----HGIKIWDLESKSIV 636 (694)
T ss_dssp SSEEEEEET-----TEEEEEETTTTEEE
T ss_pred CcEEEEEcC-----CCEEEEECCCCCCh
Confidence 444444432 24788888876543
No 152
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.40 E-value=2.9 Score=38.04 Aligned_cols=151 Identities=7% Similarity=0.051 Sum_probs=72.4
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
++..++.|+.+ ..+.+||.... -..+. .+....-.+++...++. ++.|+.+ ..+.+||+.+..
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~~-~~~~~----~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDKV-IKTFS----GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTEE-EEEEC----SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCC
T ss_pred CCCEEEEEECC------CCEEEEecCce-EEEEe----ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchh
Confidence 55666666643 35888883221 11111 11122223334445665 6666543 368999987765
Q ss_pred eEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceE
Q 010847 223 WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHH 302 (499)
Q Consensus 223 W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 302 (499)
-...-. + ....-.+++...+..++.|+.+ ..+.+||+.+......-..+. .....+....+..
T Consensus 217 ~~~~~~-~---~~~~i~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~--------~~i~~~~~~~~~~ 279 (313)
T 3odt_A 217 VLRTYE-G---HESFVYCIKLLPNGDIVSCGED-----RTVRIWSKENGSLKQVITLPA--------ISIWSVDCMSNGD 279 (313)
T ss_dssp EEEEEE-C---CSSCEEEEEECTTSCEEEEETT-----SEEEEECTTTCCEEEEEECSS--------SCEEEEEECTTSC
T ss_pred hhhhhh-c---CCceEEEEEEecCCCEEEEecC-----CEEEEEECCCCceeEEEeccC--------ceEEEEEEccCCC
Confidence 322110 1 1111122333333345555533 258899988876543322111 1222333333323
Q ss_pred EEEEcCCCCCCCceEEEEECCCCCCCCCcc
Q 010847 303 LVAFGGYNGKYNNEVFVMRLKPRDIPRPKI 332 (499)
Q Consensus 303 l~v~GG~~~~~~~~~~~~~~~~~~W~~~~~ 332 (499)
++ .|+.++ .+.+||+....+.....
T Consensus 280 ~~-~~~~dg----~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 280 II-VGSSDN----LVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EE-EEETTS----CEEEEESCGGGCCC---
T ss_pred EE-EEeCCC----cEEEEeCCCCceeehhh
Confidence 44 466654 78899998776654433
No 153
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.38 E-value=2.9 Score=43.89 Aligned_cols=150 Identities=10% Similarity=-0.019 Sum_probs=77.2
Q ss_pred CceEEEEECCCCcEE--EeecCCCCCC-CCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCC
Q 010847 108 SMIVRFIDLETNLCG--VMETSGKVPV-ARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPA 183 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~--~~~~~g~~p~-~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~ 183 (499)
...++++++.++.-. .+. ..+. +....+... -+++.++++..... ..++++.+|..+..|..+....
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~---- 271 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGV---- 271 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECS----
T ss_pred CCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCC----
Confidence 345999999887632 232 1221 122222222 23443333332221 2567898888778888886421
Q ss_pred CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc---eEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCc
Q 010847 184 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE---WSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGC 260 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~---W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~ 260 (499)
. .....+...++ +|+....+ .....|+.+|+.+.. |..+.. ..+. ..-...+..++.+++....+ ..
T Consensus 272 ~-~~~~~~~~~g~-l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~-~~l~~~~~~~~~lv~~~~~d---g~ 341 (695)
T 2bkl_A 272 G-AKYEVHAWKDR-FYVLTDEG--APRQRVFEVDPAKPARASWKEIVP--EDSS-ASLLSVSIVGGHLSLEYLKD---AT 341 (695)
T ss_dssp S-CCEEEEEETTE-EEEEECTT--CTTCEEEEEBTTBCSGGGCEEEEC--CCSS-CEEEEEEEETTEEEEEEEET---TE
T ss_pred C-ceEEEEecCCc-EEEEECCC--CCCCEEEEEeCCCCCccCCeEEec--CCCC-CeEEEEEEECCEEEEEEEEC---CE
Confidence 1 11222223455 66654432 224579999987765 777632 1111 11122333477777775432 24
Q ss_pred ceEEEEECCCCceEEe
Q 010847 261 QETIVLNMTKLAWSIL 276 (499)
Q Consensus 261 ~~~~~~d~~~~~W~~l 276 (499)
..++.+++....-..+
T Consensus 342 ~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEEEEEETTCCEEEEC
T ss_pred EEEEEEeCCCCeeEEe
Confidence 5789999765544444
No 154
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=94.24 E-value=1.3 Score=35.35 Aligned_cols=95 Identities=19% Similarity=0.255 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH----HHHH
Q 010847 386 IKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIEN 461 (499)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~----~~~~ 461 (499)
+.+....+...+.+.......|......+..+..++..+++..+..+....+++..+..+-.+++.++..+. ..+.
T Consensus 18 ~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee 97 (129)
T 2fxo_A 18 MKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEE 97 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444333333344444444444444444334444444444444444444444445555544444 2333
Q ss_pred HHHHHHHhHHHHHHHHHHh
Q 010847 462 EVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 462 e~~~~~~~~~~~~~~~~~~ 480 (499)
....+...+..++.+.+++
T Consensus 98 ~~~~L~~~kkkle~e~~~L 116 (129)
T 2fxo_A 98 MNAELTAKKRKLEDECSEL 116 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555443
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.22 E-value=3.3 Score=38.08 Aligned_cols=143 Identities=17% Similarity=0.110 Sum_probs=69.9
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCc-cceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPM-SDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLC 121 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r-~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 121 (499)
+.+.++|+.+++-...-..+. .. ..+.++.. ++.+|+.+.. ...++++|+.+++-
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD----------------AGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGET 68 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT----------------CTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEEcCC----------------CCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCe
Confidence 468999999886654333211 00 01222222 3477777643 23599999998875
Q ss_pred EEeecCCCCCC--CCcceEEEEE-C-CEEEEEcCc---CCCCC--ccCcEEEEECCCCeeEEeeecCCCCCCCccceEEE
Q 010847 122 GVMETSGKVPV--ARGGHSVTLV-G-SRLIIFGGE---DRSRK--LLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAAL 192 (499)
Q Consensus 122 ~~~~~~g~~p~--~r~~~~~~~~-~-~~lyv~GG~---~~~~~--~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 192 (499)
......+. +. ...-+.++.. + +.||+.... ..... ..+.+++||+.+.+....-..+.. -+.++.
T Consensus 69 ~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~ 142 (337)
T 1pby_B 69 LGRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-----ITMLAW 142 (337)
T ss_dssp EEEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-----CCCEEE
T ss_pred EeeEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-----cceeEE
Confidence 43221111 00 0011222322 3 367776311 00100 136799999988776543322211 122333
Q ss_pred EcC-cEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 193 HAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 193 ~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
..+ ++||+.+ +.+++||+.+.+-
T Consensus 143 s~dg~~l~~~~--------~~i~~~d~~~~~~ 166 (337)
T 1pby_B 143 ARDGSKLYGLG--------RDLHVMDPEAGTL 166 (337)
T ss_dssp CTTSSCEEEES--------SSEEEEETTTTEE
T ss_pred CCCCCEEEEeC--------CeEEEEECCCCcE
Confidence 333 3355542 3577777776653
No 156
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.19 E-value=2.9 Score=38.11 Aligned_cols=215 Identities=10% Similarity=-0.003 Sum_probs=104.4
Q ss_pred ccccCCCCCeEEcccCCCCCCc----ccceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCC
Q 010847 6 WHLELPYDLWVTLPVSGARPSP----RYKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLP 81 (499)
Q Consensus 6 ~~~~~~~~~W~~~~~~~~~p~~----r~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~ 81 (499)
+.+|+..+ ...+..+...|.. ..+.||+.... ...+.+||+.+++...+..... ..+.
T Consensus 53 ~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~------------~~~~ 114 (296)
T 3e5z_A 53 WAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE------------GKKL 114 (296)
T ss_dssp EEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET------------TEEC
T ss_pred EEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC------------CCCC
Confidence 45667666 5555433222211 12266655321 2358999999998876643210 0011
Q ss_pred CccceeEEEECCEEEEE----cccCC-------CCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEE
Q 010847 82 PMSDHCMVKWGTKLLIL----GGHYK-------KSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIF 149 (499)
Q Consensus 82 ~r~~~s~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~ 149 (499)
.+....++.-++.||+. |.... .......++.||+. +....+.. ....+ ..++. -++++++.
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~---~gi~~s~dg~~lv~ 188 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR--DRVKP---NGLAFLPSGNLLVS 188 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC--CCSSE---EEEEECTTSCEEEE
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec--CCCCC---ccEEECCCCCEEEE
Confidence 11222222225778886 43210 00113469999987 66555531 11111 22222 24555544
Q ss_pred cCcCCCCCccCcEEEEECC-CCee-EEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecc
Q 010847 150 GGEDRSRKLLNDVHFLDLE-TMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 227 (499)
Q Consensus 150 GG~~~~~~~~~~v~~yd~~-t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 227 (499)
... .+.+++||+. +++. ...... ... ...-..++...++.||+..+ +.|.+||+.......+.
T Consensus 189 ~~~------~~~i~~~~~~~~g~~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 189 DTG------DNATHRYCLNARGETEYQGVHF-TVE-PGKTDGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp ETT------TTEEEEEEECSSSCEEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEE
T ss_pred eCC------CCeEEEEEECCCCcCcCCCeEe-eCC-CCCCCeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEE
Confidence 332 3468999986 5555 222221 111 11112344445666887651 46999998755544442
Q ss_pred cCCCCCCcCcccEEEEE--C-CEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 228 IKGDLVTGRAGHAGITI--D-ENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 228 ~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
. +.. -.+++.- + +.|||... ..++.|++.+..
T Consensus 254 ~----~~~--~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 254 T----PQT--TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRG 288 (296)
T ss_dssp C----SSC--CCEEEEESTTSCEEEEEET-------TEEEEEECSCCB
T ss_pred C----CCC--ceeEEEECCCCCEEEEEcC-------CeEEEEEccccc
Confidence 2 111 1122221 2 25666542 258899887764
No 157
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.18 E-value=0.28 Score=39.59 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=23.8
Q ss_pred hhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 010847 405 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM 452 (499)
Q Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 452 (499)
.+++.+.+.++.++++..+++..++.++...+.+.+.++.++.+++++
T Consensus 71 ~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~ 118 (138)
T 3hnw_A 71 FKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSE 118 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455555555555555555555555555444444443333
No 158
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.18 E-value=3.3 Score=37.86 Aligned_cols=63 Identities=10% Similarity=0.071 Sum_probs=34.0
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC----CEEEEEcCcCCCCCccCcEEEEECC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
+.+++.|+.+ ..+.++|+.++.|..+... ........++.+. +.+++.|+.+ ..+.+||+.
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBC
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEec
Confidence 5567777653 3488889888776554321 1111112223331 4566666643 357777776
Q ss_pred CC
Q 010847 169 TM 170 (499)
Q Consensus 169 t~ 170 (499)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 159
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.17 E-value=0.6 Score=46.85 Aligned_cols=31 Identities=10% Similarity=0.284 Sum_probs=12.9
Q ss_pred HHHHHHHHhhhHHHHHhhhhhHHHHHHhhcc
Q 010847 387 KEDKRVLELSLTEVRTENSRFREKIDEVNST 417 (499)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 417 (499)
++.+.++++.+.+.+....+++..+++...+
T Consensus 366 ~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~ 396 (487)
T 3oja_A 366 EQKKKALDEQVSNGRRAHAELDGTLQQAVGQ 396 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHhhch
Confidence 3333344444444444444444444444333
No 160
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.14 E-value=2.8 Score=44.01 Aligned_cols=227 Identities=11% Similarity=0.009 Sum_probs=107.9
Q ss_pred CCCcccceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEccc
Q 010847 24 RPSPRYKKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGH 101 (499)
Q Consensus 24 ~p~~r~~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~ 101 (499)
.|.++...+|.+-- ..+.....+|+.+...+.|+.+-..... . .........+.+ +++.+++.-.
T Consensus 74 ~p~~dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~d~~~~----------a--~~~~~~~~~~~~SPDG~~la~~~~ 140 (695)
T 2bkl_A 74 TPSRRNGRFFYVRT-HKDKEKAILYWRQGESGQEKVLLDPNGW----------S--KDGTVSLGTWAVSWDGKKVAFAQK 140 (695)
T ss_dssp CCEEETTEEEEEEE-CTTCSSCEEEEEESTTSCCEEEECGGGS----------S--SSSCEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEECCEEEEEEE-cCCCeEEEEEEEcCCCCCcEEEEchHHh----------c--cCCCEEEEEEEECCCCCEEEEEEC
Confidence 34444445554432 2223356788888888888877543211 0 000111122222 4454444332
Q ss_pred CCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCC-------CccCcEEEEECCCCee-
Q 010847 102 YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSR-------KLLNDVHFLDLETMTW- 172 (499)
Q Consensus 102 ~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~-------~~~~~v~~yd~~t~~W- 172 (499)
.... ....++++|+.++.... . ...+.... ..++. -+++.++++..+... .....++.+++.+..-
T Consensus 141 ~~G~-~~~~i~v~dl~tg~~~~-~--~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~ 215 (695)
T 2bkl_A 141 PNAA-DEAVLHVIDVDSGEWSK-V--DVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK 215 (695)
T ss_dssp ETTC-SCCEEEEEETTTCCBCS-S--CCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG
T ss_pred CCCC-ceEEEEEEECCCCCCcC-C--cccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh
Confidence 2221 13469999999987531 1 11221111 22222 245555554443220 1345699999987753
Q ss_pred -EEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEE
Q 010847 173 -DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIV 251 (499)
Q Consensus 173 -~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~ 251 (499)
..+.. ....+........-.++..++++..... ..+++|.+|..+..|..+.... . .....+..++.+|+.
T Consensus 216 ~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~----~-~~~~~~~~~g~l~~~ 287 (695)
T 2bkl_A 216 DTVVHE--RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGV----G-AKYEVHAWKDRFYVL 287 (695)
T ss_dssp CEEEEC--CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECS----S-CCEEEEEETTEEEEE
T ss_pred ceEEEe--cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCC----C-ceEEEEecCCcEEEE
Confidence 22221 1111122223333334434444432211 3467898887777787764211 1 111222245565554
Q ss_pred eCCCCCCCcceEEEEECCCCc---eEEecc
Q 010847 252 GGGDNNNGCQETIVLNMTKLA---WSILTS 278 (499)
Q Consensus 252 GG~~~~~~~~~~~~~d~~~~~---W~~l~~ 278 (499)
... ......++++|+.+.. |..+..
T Consensus 288 s~~--~~~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 288 TDE--GAPRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp ECT--TCTTCEEEEEBTTBCSGGGCEEEEC
T ss_pred ECC--CCCCCEEEEEeCCCCCccCCeEEec
Confidence 332 2223578999987754 877643
No 161
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.03 E-value=1.8 Score=39.80 Aligned_cols=152 Identities=9% Similarity=-0.053 Sum_probs=73.5
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCC-----CCCCceEEEEECCCC
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKK-----SSDSMIVRFIDLETN 119 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~-----~~~~~~~~~yd~~t~ 119 (499)
+.+..||+.+++++.+..... ..+..+....++.-++.||+..-.... ......++++|+. +
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~------------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g 139 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDN------------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H 139 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCT------------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S
T ss_pred CeEEEEECCCCcEEEEEecCC------------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C
Confidence 468999999999887765421 111122222222225677764211110 0123468999875 3
Q ss_pred cEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEEC--CCCeeEEeeecCCCCCC-CccceEEEEc
Q 010847 120 LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL--ETMTWDAVEVTQTPPAP-RYDHSAALHA 194 (499)
Q Consensus 120 ~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~p~~-r~~~~~~~~~ 194 (499)
....+.. .... ...++.. ++.||+.... .+.++.||. .+............+.. ..-..++...
T Consensus 140 ~~~~~~~--~~~~---pngi~~spdg~~lyv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 140 HVKKYFD--QVDI---SNGLDWSLDHKIFYYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp CEEEEEE--EESB---EEEEEECTTSCEEEEEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred CEEEEee--cccc---ccceEEcCCCCEEEEecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence 3333321 1111 1223322 3467776432 456888886 45544322111111111 1112334444
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCceEe
Q 010847 195 NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ 225 (499)
Q Consensus 195 ~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~ 225 (499)
++.||+....+ +.|++||+.+++...
T Consensus 209 ~G~lwva~~~~-----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 209 EGKLWVACYNG-----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp TSCEEEEEETT-----TEEEEECTTTCCEEE
T ss_pred CCCEEEEEcCC-----CEEEEEcCCCceEEE
Confidence 66677764221 359999998776443
No 162
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.02 E-value=3.9 Score=38.10 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=90.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCC--CcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++..++.|+.+. .+.++|+.. ..+..+.. +.........+.+ ++.+++.|+.+. .+.++|.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCC------eEEEEEC
Confidence 456666676533 388888743 33444432 1111111222333 456677776543 4788888
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEc-C--cEEEEEcCCCCCCCCCcEEEEECCCC------ceEecccCCCCCCcCcc
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHA-N--RYLIVFGGCSHSIFFNDLHVLDLQTN------EWSQPEIKGDLVTGRAG 238 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~-~--~~l~v~GG~~~~~~~~~i~~~d~~~~------~W~~~~~~~~~p~~r~~ 238 (499)
.+..|..+..... ....-..+.+. + ...++.|+.++ .+.++|+.+. .|..+.... ......-
T Consensus 183 ~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~-~~h~~~v 253 (330)
T 2hes_X 183 YDDDWECVAVLNG---HEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILP-DVHKRQV 253 (330)
T ss_dssp ETTEEEEEEEECC---CSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECC-SCCSSCE
T ss_pred CCCCeeEEEEccC---CCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecc-cccccce
Confidence 7777766654211 11111222332 2 34566666542 4666665332 344432111 0011122
Q ss_pred cEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCC-ceEEEEEcC--ceEEEEEcCCCCCCCc
Q 010847 239 HAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGL-SVCSAIIEG--EHHLVAFGGYNGKYNN 315 (499)
Q Consensus 239 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~-~~~~~~~~~--~~~l~v~GG~~~~~~~ 315 (499)
.+++...+.+++.||.++ .+.+||..+..|..+...... +.. ....+.... +..+++.||.++
T Consensus 254 ~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~-----h~~~~v~~v~~~~~~~~~~las~s~Dg---- 319 (330)
T 2hes_X 254 YNVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFAKRALC-----HGVYEINVVKWLELNGKTILATGGDDG---- 319 (330)
T ss_dssp EEEEECTTSCEEEEETTS-----CEEEEEEETTEEEEEEEESCT-----TTTSCEEEEEEC-----CCEEEEETTS----
T ss_pred EEEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEeccccc-----cccceEEEEEEecCCCceEEEEecCCC----
Confidence 233333455666666433 367788878878654332110 111 222222221 234566677765
Q ss_pred eEEEEECC
Q 010847 316 EVFVMRLK 323 (499)
Q Consensus 316 ~~~~~~~~ 323 (499)
.+.++++.
T Consensus 320 ~v~~W~~~ 327 (330)
T 2hes_X 320 IVNFWSLE 327 (330)
T ss_dssp EEEEEEC-
T ss_pred cEEEEEec
Confidence 56667654
No 163
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=94.01 E-value=1.4 Score=33.03 Aligned_cols=43 Identities=19% Similarity=0.310 Sum_probs=23.2
Q ss_pred hHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhh
Q 010847 397 LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRC 439 (499)
Q Consensus 397 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (499)
+.....+...+.+++..++.+......++...+.+...+...+
T Consensus 13 L~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE 55 (96)
T 3q8t_A 13 LKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEE 55 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Confidence 3334445555666666666666666666555555555444333
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.97 E-value=3.8 Score=43.51 Aligned_cols=187 Identities=13% Similarity=0.022 Sum_probs=90.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
..+++|+.+ ..+.+||..++.....-... ......+.+ ++..++.|+.+
T Consensus 68 ~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~d------ 118 (814)
T 3mkq_A 68 NWIIVGSDD-----FRIRVFNYNTGEKVVDFEAH------------------PDYIRSIAVHPTKPYVLSGSDD------ 118 (814)
T ss_dssp TEEEEEETT-----SEEEEEETTTCCEEEEEECC------------------SSCEEEEEECSSSSEEEEEETT------
T ss_pred CEEEEEeCC-----CeEEEEECCCCcEEEEEecC------------------CCCEEEEEEeCCCCEEEEEcCC------
Confidence 556666642 35889999988764432211 111222222 34455555532
Q ss_pred ceEEEEECCCC-cEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 109 MIVRFIDLETN-LCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 109 ~~~~~yd~~t~-~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
..+.+||..++ ....... .... .-.+++.. ++.+++.|+.+ ..+.+||+.+..-...... . ...
T Consensus 119 g~i~vw~~~~~~~~~~~~~--~~~~--~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~-~--~~~ 185 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQTFE--GHEH--FVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTT-G--QER 185 (814)
T ss_dssp SEEEEEEGGGTSEEEEEEE--CCSS--CEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEEC-C--CTT
T ss_pred CEEEEEECCCCceEEEEEc--CCCC--cEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEec-C--CCC
Confidence 34888998776 3222211 1111 11222333 34677777653 3588999866543222211 1 111
Q ss_pred ccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcce
Q 010847 186 YDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 186 ~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~ 262 (499)
....++... ++.+++.|+.+ ..+.+||+.+..-...-. + . ...-.+++.. ++.+++.|+.++ .
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~-~--~-~~~v~~~~~~~~~~~l~~~~~dg-----~ 251 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVATLE-G--H-MSNVSFAVFHPTLPIIISGSEDG-----T 251 (814)
T ss_dssp CCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEEEE-C--C-SSCEEEEEECSSSSEEEEEETTS-----C
T ss_pred CEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEEEc-C--C-CCCEEEEEEcCCCCEEEEEeCCC-----e
Confidence 122222222 44466776654 368999987765332110 1 0 0111122222 345667766433 4
Q ss_pred EEEEECCCCce
Q 010847 263 TIVLNMTKLAW 273 (499)
Q Consensus 263 ~~~~d~~~~~W 273 (499)
+.+||+.+..-
T Consensus 252 v~vwd~~~~~~ 262 (814)
T 3mkq_A 252 LKIWNSSTYKV 262 (814)
T ss_dssp EEEEETTTCSE
T ss_pred EEEEECCCCcE
Confidence 77888876543
No 165
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.97 E-value=2.4 Score=39.29 Aligned_cols=108 Identities=13% Similarity=0.096 Sum_probs=56.7
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE----CCEEEEEcccCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW----GTKLLILGGHYKKSS 106 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~----~~~iyv~GG~~~~~~ 106 (499)
.+++.|+.+ ..+.+||+.++....+..+... ......+.+ ++.+++.|+.+.
T Consensus 26 ~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH----------------~~~V~~v~~~~~~~~~~l~s~s~D~--- 81 (316)
T 3bg1_A 26 TRLATCSSD-----RSVKIFDVRNGGQILIADLRGH----------------EGPVWQVAWAHPMYGNILASCSYDR--- 81 (316)
T ss_dssp CEEEEEETT-----TEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEECCGGGSSCEEEEETTS---
T ss_pred CEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCC----------------CccEEEEEeCCCCCCCEEEEEECCC---
Confidence 566676643 2478888887765444333211 111222333 256677776543
Q ss_pred CCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCcEEEEECCCC-eeEE
Q 010847 107 DSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLNDVHFLDLETM-TWDA 174 (499)
Q Consensus 107 ~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~ 174 (499)
.+.++|+.++.|...... ........++.+ + +.+++.|+.+. .+.++|+.+. .|..
T Consensus 82 ---~v~iWd~~~~~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 82 ---KVIIWREENGTWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEGQWEV 142 (316)
T ss_dssp ---CEEEECCSSSCCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSSCEEE
T ss_pred ---EEEEEECCCCcceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCCCcce
Confidence 388899988877654421 111111122222 2 45677776543 4777787664 4643
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.92 E-value=4.4 Score=38.38 Aligned_cols=202 Identities=12% Similarity=0.031 Sum_probs=98.0
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
..++++|+.++.-..+..... ..........-+..|++... ...++++|+.++.-..+
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~---------------~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRG---------------DNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLEENVV 117 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSC---------------BCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCCEEEE
T ss_pred ceEEEEeCCCCceEEeeeCCC---------------CCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCcceee
Confidence 369999999988776653221 01111122222345555442 13599999999876665
Q ss_pred ecCCCCCCCCcceEEEEE--CCEEEE-Ec---CcC------------CCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 125 ETSGKVPVARGGHSVTLV--GSRLII-FG---GED------------RSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 125 ~~~g~~p~~r~~~~~~~~--~~~lyv-~G---G~~------------~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
. ..|........... ++++++ +- ... ........++.+|+.+.+-..+.... ..
T Consensus 118 ~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~~- 189 (388)
T 3pe7_A 118 Y---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN----QW- 189 (388)
T ss_dssp E---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES----SC-
T ss_pred e---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC----cc-
Confidence 4 33333222222221 333322 11 000 00112367999999988766664311 11
Q ss_pred cceEEEEc-CcEEEEEcCCC-CCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE-EEEEeCCCCCCCcce
Q 010847 187 DHSAALHA-NRYLIVFGGCS-HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN-WYIVGGGDNNNGCQE 262 (499)
Q Consensus 187 ~~~~~~~~-~~~l~v~GG~~-~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-l~v~GG~~~~~~~~~ 262 (499)
........ ++..+++.... .......+|.+|+.+.....+.. ..........+.. +++ |+.+.. ........
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~~~~spdg~~l~~~~~-~~~~~~~~ 265 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGESCTHEFWVPDGSALVYVSY-LKGSPDRF 265 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTEEEEEEEECTTSSCEEEEEE-ETTCCCEE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCCcccccceECCCCCEEEEEec-CCCCCcce
Confidence 12223333 44444443322 11234689999998777666521 1110011111221 344 433332 21111224
Q ss_pred EEEEECCCCceEEeccCC
Q 010847 263 TIVLNMTKLAWSILTSVK 280 (499)
Q Consensus 263 ~~~~d~~~~~W~~l~~~~ 280 (499)
++++|+.++.-..+...+
T Consensus 266 l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 266 IYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEEECTTTCCEEEEEEEC
T ss_pred EEEEecCCCceEEEEcCC
Confidence 999999998876665443
No 167
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.88 E-value=7.3 Score=40.76 Aligned_cols=235 Identities=12% Similarity=-0.001 Sum_probs=117.2
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCC------CCCCceEEEEECCC
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKK------SSDSMIVRFIDLET 118 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~------~~~~~~~~~yd~~t 118 (499)
..++++|+.++......... .+....+-.-++.||+....... ......++.+++.+
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~-----------------~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt 217 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKD-----------------VKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGT 217 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEE-----------------EESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTS
T ss_pred EEEEEEECCCCCCCccccCC-----------------ceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCC
Confidence 47899999999876543211 11122222333455554332210 01234688888877
Q ss_pred CcEE--EeecCCCCCC--CCcceEEEE-ECC-EEEEEcCcCCCCCccCcEEEEECCCC--eeEEeeecCCCCCCCccceE
Q 010847 119 NLCG--VMETSGKVPV--ARGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPAPRYDHSA 190 (499)
Q Consensus 119 ~~W~--~~~~~g~~p~--~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~p~~r~~~~~ 190 (499)
..=. .+. ..+. +....++.. -++ .|++....+. ..++++++|+.+. .|..+... .......
T Consensus 218 ~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~~l~~~-----~~~~~~~ 286 (693)
T 3iuj_A 218 AQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLLTVQGD-----LDADVSL 286 (693)
T ss_dssp CGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCEEEECS-----SSSCEEE
T ss_pred CcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceEEEeCC-----CCceEEE
Confidence 6531 222 1121 222222222 234 4544433221 2468999998765 78777531 1111222
Q ss_pred EEEcCcEEEEEcCCCCCCCCCcEEEEECCCC---ceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEE
Q 010847 191 ALHANRYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 267 (499)
Q Consensus 191 ~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d 267 (499)
....++.+|+....+ .....|+.+|+.+. .|+.+.. ..... . +....++.|++..-.+ ....++++|
T Consensus 287 ~~~~g~~l~~~t~~~--~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~--~-~~s~~g~~lv~~~~~~---g~~~l~~~d 356 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRD--APNRRLVTVDAANPGPAHWRDLIP--ERQQV--L-TVHSGSGYLFAEYMVD---ATARVEQFD 356 (693)
T ss_dssp EEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEEC--CCSSC--E-EEEEETTEEEEEEEET---TEEEEEEEC
T ss_pred EeccCCEEEEEECCC--CCCCEEEEEeCCCCCccccEEEec--CCCCE--E-EEEEECCEEEEEEEEC---CeeEEEEEE
Confidence 334466788876543 23457999998764 3777532 11111 1 4444566666554322 245789999
Q ss_pred CCCCceEEeccCCCCCCCCCCCCceEEEE--EcCceEEEEEcCCCCCCCceEEEEECCCCCC
Q 010847 268 MTKLAWSILTSVKGRNPLASEGLSVCSAI--IEGEHHLVAFGGYNGKYNNEVFVMRLKPRDI 327 (499)
Q Consensus 268 ~~~~~W~~l~~~~~~~p~~~~~~~~~~~~--~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~W 327 (499)
+.......+.. +.. +. ...+. .+++..++.+.+.. ....+|.||+.....
T Consensus 357 ~~g~~~~~l~~-p~~------~~-~~~~~~~~d~~~l~~~~ss~~--tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 357 YEGKRVREVAL-PGL------GS-VSGFNGKHDDPALYFGFENYA--QPPTLYRFEPKSGAI 408 (693)
T ss_dssp TTSCEEEEECC-SSS------SE-EEECCCCTTCSCEEEEEECSS--SCCEEEEECTTTCCE
T ss_pred CCCCeeEEeec-CCC------ce-EEeeecCCCCCEEEEEecCCC--CCCEEEEEECCCCeE
Confidence 88766555532 211 11 11111 12333444444432 235788888765543
No 168
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.82 E-value=7.4 Score=40.59 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=65.7
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 108 (499)
.||+... ...++.+|..+++ |+.-...... .. ..........+.++.+++||+... .
T Consensus 68 ~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~v~v~~~-------d 126 (668)
T 1kv9_A 68 VIYTSMS------WSRVIAVDAASGKELWRYDPEVAKV------KA--RTSCCDAVNRGVALWGDKVYVGTL-------D 126 (668)
T ss_dssp EEEEEEG------GGEEEEEETTTCCEEEEECCCCCGG------GG--GGCTTCSCCCCCEEEBTEEEEECT-------T
T ss_pred EEEEECC------CCeEEEEECCCChhceEECCCCCcc------cc--ccccccCCccceEEECCEEEEEcC-------C
Confidence 6666543 2468999998875 8875432110 00 000000112234567888887542 2
Q ss_pred ceEEEEECCCCc--EEEeecCCCCC-CCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEEe
Q 010847 109 MIVRFIDLETNL--CGVMETSGKVP-VARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDAV 175 (499)
Q Consensus 109 ~~~~~yd~~t~~--W~~~~~~g~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~ 175 (499)
..++.+|..|++ |+.... ..+ ......+.++.++.+|+..+.. .......++.||+.|++ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~~~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTT--DPAKPYSITGAPRVVKGKVIIGNGGA-EYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECS--CTTSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccC--CCCCcceecCCCEEECCEEEEeCCCC-CcCCCCEEEEEECCCCcEEEEec
Confidence 349999998885 876541 111 1112223355688877643221 11124579999998865 8754
No 169
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.81 E-value=3.7 Score=39.72 Aligned_cols=145 Identities=12% Similarity=0.066 Sum_probs=73.3
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
+.+++.|+.++ .+.+||..++.....- .... ..-.++.+ ++.+++.||.+. .+.+||+.+.
T Consensus 120 ~~~l~s~s~Dg------~i~vwd~~~~~~~~~l---~~h~--~~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~ 182 (410)
T 1vyh_C 120 FSVMVSASEDA------TIKVWDYETGDFERTL---KGHT--DSVQDISFDHSGKLLASCSADM------TIKLWDFQGF 182 (410)
T ss_dssp SSEEEEEESSS------CEEEEETTTCCCCEEE---CCCS--SCEEEEEECTTSSEEEEEETTS------CCCEEETTSS
T ss_pred CCEEEEEeCCC------eEEEEECCCCcEEEEE---eccC--CcEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCC
Confidence 55777776533 3889998887643322 1111 11122223 456777777543 4777888765
Q ss_pred eeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DEN 247 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~ 247 (499)
.- +.. +........++.+ .++..++.|+.+ ..+.+||+.++.....- .+ .......+.. ++.
T Consensus 183 ~~--~~~---~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~-~~----h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 183 EC--IRT---MHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTF-TG----HREWVRMVRPNQDGT 247 (410)
T ss_dssp CE--EEC---CCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEE-EC----CSSCEEEEEECTTSS
T ss_pred ce--eEE---EcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE-eC----CCccEEEEEECCCCC
Confidence 43 221 1111112223333 344466667654 36889998876543211 01 0111112222 456
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
+++.|+.++ .+.+||+.+....
T Consensus 248 ~l~s~s~D~-----~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 248 LIASCSNDQ-----TVRVWVVATKECK 269 (410)
T ss_dssp EEEEEETTS-----CEEEEETTTCCEE
T ss_pred EEEEEcCCC-----eEEEEECCCCcee
Confidence 677776443 3677787766543
No 170
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=93.79 E-value=0.42 Score=38.56 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=22.9
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKML 453 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 453 (499)
+...|+.++++...++.++.+++.+.+.+++..++...+++.++.++++++
T Consensus 76 ~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~ 126 (138)
T 3hnw_A 76 MADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNI 126 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444444444444444444444443
No 171
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.74 E-value=6.5 Score=40.36 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=64.0
Q ss_pred eEEEEcCCCCCcccCcEEEEEc-CCCc--eEEeeeCcccccCccccCCCCCCCCCc---cceeEEE--ECCE----EEEE
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDL-RSLA--WSNLRLETELDADKTEDSGLLEVLPPM---SDHCMVK--WGTK----LLIL 98 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r---~~~s~~~--~~~~----iyv~ 98 (499)
.||+.+.+ .+.++.||. .+++ |+.-...... ..+..+ .....++ .++. ||+.
T Consensus 64 ~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~-----------~~~~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 64 KMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPA-----------ARAVACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp EEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGG-----------GGGGCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred EEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCcc-----------ccccccccccccceEEEecCCcceeEEEEE
Confidence 67766542 246999999 7775 8875432210 000011 1122344 5666 8775
Q ss_pred cccCCCCCCCceEEEEECCCCc--EEEeecCCCCCCC-CcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe--eE
Q 010847 99 GGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVA-RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WD 173 (499)
Q Consensus 99 GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~ 173 (499)
.. ...++.+|..|++ |+.... ..... ....+-++.++.||+-.+.. .......++.||..|++ |+
T Consensus 128 t~-------dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~~g~V~vg~~g~-e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 128 QL-------DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVVKDKVIIGSSGA-ELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp CT-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEECCBCG-GGTCCCEEEEEETTTCCEEEE
T ss_pred cC-------CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEECCEEEEEeccc-ccCCCCeEEEEECCCCcEEEE
Confidence 32 2349999998885 775431 11111 11123345688877643211 11124579999998865 87
Q ss_pred Eee
Q 010847 174 AVE 176 (499)
Q Consensus 174 ~~~ 176 (499)
.-.
T Consensus 198 ~~~ 200 (599)
T 1w6s_A 198 AYA 200 (599)
T ss_dssp EES
T ss_pred EcC
Confidence 543
No 172
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.74 E-value=2.4 Score=40.40 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeec------CC-CCCC-CCcceEEEEE---CCEEEEEcCcCCCCCccC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMET------SG-KVPV-ARGGHSVTLV---GSRLIIFGGEDRSRKLLN 160 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~------~g-~~p~-~r~~~~~~~~---~~~lyv~GG~~~~~~~~~ 160 (499)
++.+++.|+.++ .+.+||+.+........ .+ ..+. ......++.+ ++.+++.|+.+ .
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------~ 122 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------K 122 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT------S
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC------C
Confidence 456777776533 38888887764321110 00 0111 1112222333 34566666643 3
Q ss_pred cEEEEECCCCeeEEeeecCCCCCCCccceEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCccc
Q 010847 161 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH 239 (499)
Q Consensus 161 ~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~ 239 (499)
.+.+||+.+..-..... .+.+.........+ ++.+++.|+.+ ..+.+||+.+..-...- . .....-.
T Consensus 123 ~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~~--~--~~~~~v~ 190 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHIL--Q--GHRQEIL 190 (408)
T ss_dssp EEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEEE--C--CCCSCEE
T ss_pred eEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeeee--c--CCCCcEE
Confidence 68999998876544432 11121111111111 33366666644 46899998765432210 0 0111111
Q ss_pred EEEEEC--CEEEEEeCCCCCCCcceEEEEECCCCc--eEEeccCCCC------CCCCCCCCceEEEEEcCceEEEEEcCC
Q 010847 240 AGITID--ENWYIVGGGDNNNGCQETIVLNMTKLA--WSILTSVKGR------NPLASEGLSVCSAIIEGEHHLVAFGGY 309 (499)
Q Consensus 240 ~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~~--W~~l~~~~~~------~p~~~~~~~~~~~~~~~~~~l~v~GG~ 309 (499)
+++... ..+++.|+.++ .+.+||+.+.. ...+...... .....+......+....+...++.|+.
T Consensus 191 ~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 191 AVSWSPRYDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEECSSCTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 222222 23677776443 37788876543 2222111000 000112222333334333334555666
Q ss_pred CCCCCceEEEEECCCCC
Q 010847 310 NGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 310 ~~~~~~~~~~~~~~~~~ 326 (499)
++ .+.+||+....
T Consensus 266 dg----~i~vwd~~~~~ 278 (408)
T 4a11_B 266 DN----RMRLWNSSNGE 278 (408)
T ss_dssp TS----CEEEEETTTCC
T ss_pred CC----eEEEEECCCCc
Confidence 54 68888886543
No 173
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.71 E-value=4.2 Score=37.47 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=52.7
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
+.+++.|+.+ ..+.+||+.+....... .... ....++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 185 ~~~~~s~~~d------~~i~i~d~~~~~~~~~~---~~h~--~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~ 247 (340)
T 4aow_A 185 NPIIVSCGWD------KLVKVWNLANCKLKTNH---IGHT--GYLNTVTVSPDGSLCASGGKD------GQAMLWDLNEG 247 (340)
T ss_dssp SCEEEEEETT------SCEEEEETTTTEEEEEE---CCCS--SCEEEEEECTTSSEEEEEETT------CEEEEEETTTT
T ss_pred CcEEEEEcCC------CEEEEEECCCCceeeEe---cCCC--CcEEEEEECCCCCEEEEEeCC------CeEEEEEeccC
Confidence 3455566543 23888999887654432 1111 11122223 45677777754 35888998876
Q ss_pred eeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
.-...... . .....+.+ .++ .++.++.+ +.+.+||+.+..
T Consensus 248 ~~~~~~~~-----~-~~v~~~~~~~~~-~~~~~~~d-----~~i~iwd~~~~~ 288 (340)
T 4aow_A 248 KHLYTLDG-----G-DIINALCFSPNR-YWLCAATG-----PSIKIWDLEGKI 288 (340)
T ss_dssp EEEEEEEC-----S-SCEEEEEECSSS-SEEEEEET-----TEEEEEETTTTE
T ss_pred ceeeeecC-----C-ceEEeeecCCCC-ceeeccCC-----CEEEEEECCCCe
Confidence 54332211 1 11222333 344 34555543 358888987765
No 174
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=93.70 E-value=2 Score=35.40 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=18.1
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhh
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAER 436 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (499)
...+|+..+..++.....+++++..++.++++++
T Consensus 49 ~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr 82 (168)
T 3o0z_A 49 LNRELQERNRILENSKSQTDKDYYQLQAILEAER 82 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555555555555555555554
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.67 E-value=4 Score=41.65 Aligned_cols=205 Identities=16% Similarity=0.099 Sum_probs=103.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCC--------CCCCcceEEEEECCEEEEEcCcCCCCCccCcEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV--------PVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH 163 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~--------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~ 163 (499)
+..+|+..-. .+.+.++|..+.+=...-..+.+ |.+|.....+..++..+++--. ..+.++
T Consensus 255 Gk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----~~g~v~ 323 (567)
T 1qks_A 255 DKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----ETGKIL 323 (567)
T ss_dssp TTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----TTTEEE
T ss_pred CCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-----CCCeEE
Confidence 4466665432 24588899887654432222211 2233333222233333333211 245788
Q ss_pred EEECCCCeeEEeeecCCCCCCCccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccC-CCCCCcCcccEE
Q 010847 164 FLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIK-GDLVTGRAGHAG 241 (499)
Q Consensus 164 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~-~~~p~~r~~~~~ 241 (499)
..|..+.....+.. .+.++.-|.+....+ .++|+... ..|.|.++|+.+++-...-.. +..|.|..+...
T Consensus 324 ~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 324 LVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp EEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred EEecCCCccceeee---eeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 89987766544443 233455555544444 44455432 247899999998874432223 445555433332
Q ss_pred EEEC--CEEEEEeCCCCCCCcceEEEEECCCC-----ceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCC--C
Q 010847 242 ITID--ENWYIVGGGDNNNGCQETIVLNMTKL-----AWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG--K 312 (499)
Q Consensus 242 ~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~-----~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~--~ 312 (499)
... +.+|+.+-.. ...+.++|..+. .|+.+..++... +.+....+..+..++||---.+. .
T Consensus 396 -~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-----~g~~~i~~~p~~~~l~v~~~~~~~~~ 465 (567)
T 1qks_A 396 -VHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG-----GGSLFIKTHPNSQYLYVDATLNPEAE 465 (567)
T ss_dssp -EETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC-----SCCCCEECCTTCSEEEEECTTCSSHH
T ss_pred -ECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC-----CCCEEEEeCCCCCeEEEecCCCCCcc
Confidence 332 4566654211 235778887663 387766554321 11222223344467887442221 1
Q ss_pred CCceEEEEECCCC
Q 010847 313 YNNEVFVMRLKPR 325 (499)
Q Consensus 313 ~~~~~~~~~~~~~ 325 (499)
..+.+.+||+.+.
T Consensus 466 ~~~~v~v~d~~~~ 478 (567)
T 1qks_A 466 ISGSVAVFDIKAM 478 (567)
T ss_dssp HHTCEEEEEGGGC
T ss_pred cCceEEEEECCcc
Confidence 2457899998754
No 176
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=93.65 E-value=0.33 Score=47.21 Aligned_cols=29 Identities=7% Similarity=0.236 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 010847 420 ELSKELSSVQGQLVAERSRCFKLEAQIAE 448 (499)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 448 (499)
++++.++.++.+++..-.+++.|+..|++
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLed 142 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRA 142 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444443444444444333
No 177
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.52 E-value=4.9 Score=39.26 Aligned_cols=160 Identities=8% Similarity=-0.012 Sum_probs=78.8
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCee
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTW 172 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 172 (499)
+.+++.|+.+ ..+.+||+.++........+ ........+.. ++.+++.|+.+ ..+.+||+.+.+.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s-d~~~l~s~~~d------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFG--HKHFVSSICCG-KDYLLLSAGGD------DKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCC--CSSCEEEEEEC-STTEEEEEESS------SEEEEEETTTCCE
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecC--CCCceEEEEEC-CCCEEEEEeCC------CeEEEEECCCCcE
Confidence 6677777753 23888998877643331111 11111111222 56666677643 3689999988764
Q ss_pred EEeeecCC----------C-----------CCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEEC--CC-CceEeccc
Q 010847 173 DAVEVTQT----------P-----------PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDL--QT-NEWSQPEI 228 (499)
Q Consensus 173 ~~~~~~~~----------~-----------p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~--~~-~~W~~~~~ 228 (499)
...-..+. . +....-..++...++.++++++.. -+.+.+||+ .+ ..+..+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~----d~~i~iw~~~~~~~~~l~~~~~ 350 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA----TKCIIILEMSEKQKGDLALKQI 350 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT----CSEEEEEEECSSSTTCEEEEEE
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC----CCeEEEEEeccCCCCceeeccE
Confidence 33322110 0 001111122222333344444321 246888888 33 33444321
Q ss_pred CCCCCCcCcccEEEEECCEEEEEeCCCCC----CCcceEEEEECCCCceE
Q 010847 229 KGDLVTGRAGHAGITIDENWYIVGGGDNN----NGCQETIVLNMTKLAWS 274 (499)
Q Consensus 229 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~----~~~~~~~~~d~~~~~W~ 274 (499)
.+....-.+++...+.+++..+.... ...-.+|.++..++.|.
T Consensus 351 ---~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 351 ---ITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp ---EECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred ---eccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 11112223455556777777664332 22336788888888885
No 178
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.52 E-value=0.59 Score=44.57 Aligned_cols=201 Identities=11% Similarity=0.050 Sum_probs=82.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcce-EEEEE-CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGH-SVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++++++.|+......-...++.|+..++.-...... .......+. +++.. ++.+++ ++.+ ..|.++|+.+
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~d~~~l~-~s~d------g~v~lWd~~~ 124 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT-AGVQTEAGVTDVAWVSEKGILV-ASDS------GAVELWEILE 124 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS-EEEECSSCEEEEEEETTTEEEE-EETT------SCEEEC----
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec-ccCCCCCCEEEEEEcCCCCEEE-EECC------CEEEEeeccc
Confidence 577777777543322234578887665431100000 000011111 22223 445544 4432 2488888876
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CC
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DE 246 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~ 246 (499)
.+-....... .........++.+ .++..++.|+.+ ..|.+||+.+.+....-. + . ...-.+++.. ++
T Consensus 125 ~~~~~~~~~~-~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~~~~~~-~--h-~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 125 KESLLVNKFA-KYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAVLKSYN-A--H-SSEVNCVAACPGKD 194 (357)
T ss_dssp ----CCCCEE-ECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEEEEEEC-C--C-SSCEEEEEECTTCS
T ss_pred cceeEEEeec-cCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEc-C--C-CCCEEEEEEccCCC
Confidence 5422111000 0000111122233 355567777654 358899988776433210 1 0 0111122222 23
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.+++.||.++ .+.++|+.+..-...... .........+... ....+++.|+.++ .+.++|+...
T Consensus 195 ~~~~s~~~dg-----~v~~wd~~~~~~~~~~~~------~~~~~~v~~v~~sp~~~~~la~g~~d~----~i~~wd~~~~ 259 (357)
T 4g56_B 195 TIFLSCGEDG-----RILLWDTRKPKPATRIDF------CASDTIPTSVTWHPEKDDTFACGDETG----NVSLVNIKNP 259 (357)
T ss_dssp SCEEEEETTS-----CEEECCTTSSSCBCBCCC------TTCCSCEEEEEECTTSTTEEEEEESSS----CEEEEESSCG
T ss_pred ceeeeeccCC-----ceEEEECCCCceeeeeee------ccccccccchhhhhcccceEEEeeccc----ceeEEECCCC
Confidence 5677776443 367778776542211111 0111112223332 2334666677654 5777777543
No 179
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.51 E-value=3.8 Score=43.28 Aligned_cols=151 Identities=11% Similarity=0.060 Sum_probs=78.7
Q ss_pred CceEEEEECCCCcEE--EeecCCCCCCCCcceEEEE-ECC-EEEEEcCcCCCCCccCcEEEEECCCC--e-eEEeeecCC
Q 010847 108 SMIVRFIDLETNLCG--VMETSGKVPVARGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLETM--T-WDAVEVTQT 180 (499)
Q Consensus 108 ~~~~~~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~v~~yd~~t~--~-W~~~~~~~~ 180 (499)
...++.+++.+..-. .+. .....+........ -++ .|++....... ..++++++|+.+. . |..+....
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~--~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~- 316 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVF--ATPELPKRGHGASVSSDGRWVVITSSEGTD--PVNTVHVARVTNGKIGPVTALIPDL- 316 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEE--CCTTCTTCEEEEEECTTSCEEEEEEECTTC--SCCEEEEEEEETTEECCCEEEECSS-
T ss_pred CCEEEEEECCCCchhCEEEe--ccCCCCeEEEEEEECCCCCEEEEEEEccCC--CcceEEEEECCCCCCcccEEecCCC-
Confidence 345888888776521 222 11111222222222 244 45554432211 2568999999877 6 88776311
Q ss_pred CCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCC--CceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCC
Q 010847 181 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNN 258 (499)
Q Consensus 181 ~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 258 (499)
... ...+.-+++.||+....+ .....|+.+|+.+ ..|..+.. ..... ...+...++.+++....+
T Consensus 317 --~~~--~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~--~~~~~--l~~~~~~~~~lv~~~~~d--- 383 (741)
T 1yr2_A 317 --KAQ--WDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVP--ESKDN--LESVGIAGNRLFASYIHD--- 383 (741)
T ss_dssp --SSC--EEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEEC--CCSSE--EEEEEEEBTEEEEEEEET---
T ss_pred --Cce--EEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEec--CCCCe--EEEEEEECCEEEEEEEEC---
Confidence 111 222233466677765432 2245799999988 57888642 11111 112233467777765432
Q ss_pred CcceEEEEECCCCceEEe
Q 010847 259 GCQETIVLNMTKLAWSIL 276 (499)
Q Consensus 259 ~~~~~~~~d~~~~~W~~l 276 (499)
....++++|+....-..+
T Consensus 384 g~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 384 AKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp TEEEEEEEETTSCEEEEC
T ss_pred CEEEEEEEeCCCCceeec
Confidence 245789999765544444
No 180
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.48 E-value=5.4 Score=37.97 Aligned_cols=184 Identities=11% Similarity=0.074 Sum_probs=87.8
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcc-eEEEEE---CCEEEEEcCcCCCCCccCcEEEEECCCC--eeEEeeecCCCCC
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGG-HSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETM--TWDAVEVTQTPPA 183 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~p~ 183 (499)
.+.+||+.++.-...-.. ..+..... ...+.+ ++.+++.|+.+. .+.+||+... .-..+. +.
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~--~h--- 248 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYH--GH--- 248 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEEC--CC---
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEEC--Cc---
Confidence 488899988865443211 12222211 122223 457888887643 5888888532 112221 10
Q ss_pred CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCC--CCcC-cccEEEE-ECCEEEEEeCCCCCCC
Q 010847 184 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL--VTGR-AGHAGIT-IDENWYIVGGGDNNNG 259 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~--p~~r-~~~~~~~-~~~~l~v~GG~~~~~~ 259 (499)
.-.-.+++...++..++.|+.+ ..+.+||+.++.-...-..... .... .-.+++. .++.+++.|+.++
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred CCCeEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 1111223333455567777755 3588999987754332110100 0001 1122222 2566777766432
Q ss_pred cceEEEEECCCCceEE-eccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 260 CQETIVLNMTKLAWSI-LTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 260 ~~~~~~~d~~~~~W~~-l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.+.+||+.+..-.. +..+.. .+......+....+..+++.||.++ .+.+++++.
T Consensus 321 --~i~vwd~~~~~~~~~~~~~~~-----~h~~~v~~l~~s~dg~~l~sgs~D~----~i~iW~~~~ 375 (380)
T 3iz6_a 321 --DCYVWDTLLAEMVLNLGTLQN-----SHEGRISCLGLSSDGSALCTGSWDK----NLKIWAFSG 375 (380)
T ss_dssp --CEEEEETTTCCEEEEECCSCS-----SCCCCCCEEEECSSSSEEEEECTTS----CEEEEECCS
T ss_pred --CEEEEECCCCceEEEEecccC-----CCCCceEEEEECCCCCEEEEeeCCC----CEEEEecCC
Confidence 47889987665432 221111 0111122233333334566787765 566677654
No 181
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=93.44 E-value=1.1 Score=33.18 Aligned_cols=54 Identities=22% Similarity=0.321 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhh
Q 010847 383 IDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAER 436 (499)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (499)
.+.++++...++..+.....+..+|...+........+.+++...+.++++.+-
T Consensus 7 ~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 7 YNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555444444455555555555555555555555444544444443
No 182
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.43 E-value=6.2 Score=38.52 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=54.3
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcc-eEE-EEEC---CEEEEEcCcCCCCCccCcEEEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-HSV-TLVG---SRLIIFGGEDRSRKLLNDVHFLD 166 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~-~~~-~~~~---~~lyv~GG~~~~~~~~~~v~~yd 166 (499)
++..++.|+. ...++.+++.+........ ..+...... .++ ..-+ +.+++.|+.+ ..+.+||
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSIPEEKFTQ-EPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISH 226 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSCCCSSCCC-CCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeC------CCcEEEEecCCcccccccc-eeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEE
Confidence 4555566653 2348888877654321000 011101111 122 2235 6677777754 3588999
Q ss_pred CCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 167 LETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 167 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
+.+.........+ .......+.+.++.+++.|+.+ +.|.+||+.+++.
T Consensus 227 ~~~~~~~~~~~~~----h~~~v~~~~~sd~~~l~s~~~d-----~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 227 YPQCFIVDKWLFG----HKHFVSSICCGKDYLLLSAGGD-----DKIFAWDWKTGKN 274 (450)
T ss_dssp ESCTTCEEEECCC----CSSCEEEEEECSTTEEEEEESS-----SEEEEEETTTCCE
T ss_pred CCCCceeeeeecC----CCCceEEEEECCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 8776543321111 1111122223244466666643 4689999888763
No 183
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.34 E-value=6.1 Score=41.70 Aligned_cols=225 Identities=12% Similarity=0.056 Sum_probs=106.1
Q ss_pred CCcccceEEEEcCCCCCcccCcEEEEEcC---CCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEc
Q 010847 25 PSPRYKKLYIVGGSRNGRFLSDVQVFDLR---SLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILG 99 (499)
Q Consensus 25 p~~r~~~l~~~GG~~~~~~~~~~~~yd~~---t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~G 99 (499)
|.+....+|.+-- ..+.....+|+.+.. .+.|+.+-..... + ...........+ +++.++++
T Consensus 114 p~pdG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l----------~--~~~~~~~~~~~~SPDG~~la~~ 180 (741)
T 1yr2_A 114 PQRRGASVFYSWN-SGLMNQSQLLVRPADAPVGTKGRVLLDPNTW----------A--KDGATALDAWAASDDGRLLAYS 180 (741)
T ss_dssp CEEETTEEEEEEE-CSSCSSCEEEEEETTSCTTCCCEEEECGGGC----------C------EEEEEEEECTTSSEEEEE
T ss_pred CEEECCEEEEEEE-cCCCeEEEEEEEcCCccCCCCCEEEECHHHh----------c--cCCCEEEEeEEECCCCCEEEEE
Confidence 4433335554432 222334678888887 7778775332210 0 000011122222 44545454
Q ss_pred ccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCC--------CCccCcEEEEECCCC
Q 010847 100 GHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRS--------RKLLNDVHFLDLETM 170 (499)
Q Consensus 100 G~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~--------~~~~~~v~~yd~~t~ 170 (499)
...... ....++++|+.++....... +.... ..++.. ++.||+. ..+.. ......++.+++.+.
T Consensus 181 ~~~~G~-e~~~i~v~dl~tg~~~~~~~----~~~~~-~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 253 (741)
T 1yr2_A 181 VQDGGS-DWRTVKFVGVADGKPLADEL----KWVKF-SGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTP 253 (741)
T ss_dssp EEETTC-SEEEEEEEETTTCCEEEEEE----EEEES-CCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSC
T ss_pred EcCCCC-ceEEEEEEECCCCCCCCccC----CCcee-ccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCC
Confidence 332221 13469999999998755421 11110 112222 3334443 22211 112456888898776
Q ss_pred ee--EEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCC--c-eEecccCCCCCCcCcccEEEEEC
Q 010847 171 TW--DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN--E-WSQPEIKGDLVTGRAGHAGITID 245 (499)
Q Consensus 171 ~W--~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~ 245 (499)
.- ..+.. ....+........-.++..+++.........++++++|+.+. . |..+... ...... .....+
T Consensus 254 ~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~-~~~~dg 327 (741)
T 1yr2_A 254 QSADQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD---LKAQWD-FVDGVG 327 (741)
T ss_dssp GGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS---SSSCEE-EEEEET
T ss_pred chhCEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC---CCceEE-EEeccC
Confidence 42 12211 111122222333333443334333222223578999999877 6 7776421 111111 122346
Q ss_pred CEEEEEeCCCCCCCcceEEEEECCC--CceEEec
Q 010847 246 ENWYIVGGGDNNNGCQETIVLNMTK--LAWSILT 277 (499)
Q Consensus 246 ~~l~v~GG~~~~~~~~~~~~~d~~~--~~W~~l~ 277 (499)
+.+|+....+ .....++++|+.+ ..|..+.
T Consensus 328 ~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 328 DQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp TEEEEEECTT--CTTCEEEEEECSSSSCEEEEEE
T ss_pred CEEEEEECCC--CCCCEEEEEeCCCCccccEEEe
Confidence 6777765432 2235799999988 5788774
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.33 E-value=7.9 Score=39.44 Aligned_cols=191 Identities=14% Similarity=0.051 Sum_probs=95.4
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+|+... ..+.+.++|+.+++-...-+. +..-|.++.. +..+|+.+. .
T Consensus 168 ~~~V~~~-----~~~~V~viD~~t~~v~~~i~~------------------g~~p~~v~~SpDGr~lyv~~~-------d 217 (567)
T 1qks_A 168 LFSVTLR-----DAGQIALIDGSTYEIKTVLDT------------------GYAVHISRLSASGRYLFVIGR-------D 217 (567)
T ss_dssp EEEEEET-----TTTEEEEEETTTCCEEEEEEC------------------SSCEEEEEECTTSCEEEEEET-------T
T ss_pred eEEEEeC-----CCCeEEEEECCCCeEEEEEeC------------------CCCccceEECCCCCEEEEEcC-------C
Confidence 5555543 234699999998865433222 2222333333 467787542 2
Q ss_pred ceEEEEECC--CCcEEEeecCCCCCCCCcceEEEEE-----CC-EEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCC
Q 010847 109 MIVRFIDLE--TNLCGVMETSGKVPVARGGHSVTLV-----GS-RLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT 180 (499)
Q Consensus 109 ~~~~~yd~~--t~~W~~~~~~g~~p~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 180 (499)
..+.+||+. +.+-..--..|..| ..++.. ++ .+|+..- ..+.+.++|..+.+=...-+.+.
T Consensus 218 g~V~viD~~~~t~~~v~~i~~G~~P-----~~ia~s~~~~pDGk~l~v~n~------~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKIGSEA-----RSIETSKMEGWEDKYAIAGAY------WPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEECCSEE-----EEEEECCSTTCTTTEEEEEEE------ETTEEEEEETTTCCEEEEEECCE
T ss_pred CeEEEEECCCCCCcEeEEEecCCCC-----ceeEEccccCCCCCEEEEEEc------cCCeEEEEECCCCcEEEEEeccc
Confidence 459999996 55322111112222 223332 34 6666532 24578899988765443322221
Q ss_pred C--------CCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CC-EEEE
Q 010847 181 P--------PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-NWYI 250 (499)
Q Consensus 181 ~--------p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~l~v 250 (499)
+ |.+|.........+.. +++-- ...+.++++|..+...-.+.. .+..+.-|..... ++ .+|+
T Consensus 287 ~~~~~~~~~p~~rva~i~~s~~~~~-~vv~~----~~~g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~v 358 (567)
T 1qks_A 287 MTYDEQEYHPEPRVAAILASHYRPE-FIVNV----KETGKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFIT 358 (567)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSE-EEEEE----TTTTEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEE
T ss_pred cccccccccCCCceEEEEEcCCCCE-EEEEe----cCCCeEEEEecCCCccceeee---eeccccccCceECCCCCEEEE
Confidence 1 2233222222222333 33221 224578899987765433321 2334455554443 23 3444
Q ss_pred EeCCCCCCCcceEEEEECCCCceEE
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
... ..+.+.++|+.++.-..
T Consensus 359 a~~-----~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 359 AAN-----ARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EEG-----GGTEEEEEETTTTEEEE
T ss_pred EeC-----CCCeEEEEECCCCcEEE
Confidence 432 24578999999886443
No 185
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.26 E-value=1.5 Score=41.42 Aligned_cols=191 Identities=9% Similarity=-0.000 Sum_probs=88.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
.+..++.|+.+ ..+.++|+.++.-...... ....-...-.++.+ +++.++.|+.+ ..+.++|+.+
T Consensus 92 ~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d------~~i~iwd~~~ 158 (344)
T 4gqb_B 92 GERGILVASDS------GAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKD------ICIKVWDLAQ 158 (344)
T ss_dssp TTTEEEEEETT------SEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCeEEEEECC------CEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCC------CeEEEEECCC
Confidence 44445556543 3488888887653222100 00000111122233 45677777654 3589999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCccc-EEEEE--
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH-AGITI-- 244 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~-~~~~~-- 244 (499)
.+-...-. + ....-.++.+. +..+++.|+.+ +.|.+||+.+.+-... -......... +++..
T Consensus 159 ~~~~~~~~-~----h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 159 QVVLSSYR-A----HAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQ---IGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp TEEEEEEC-C----CSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEE---CC----CCCEEEEEECSS
T ss_pred CcEEEEEc-C----cCCceEEEEecCCCCCceeeeccc-----cccccccccccceeee---eecceeeccceeeeecCC
Confidence 76432211 1 11122233332 33467777654 3588999887654331 0011111111 22222
Q ss_pred CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEcCCCCCCCceEEEEECC
Q 010847 245 DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 245 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
++.+++.|+.++ .+.+||+.+..- +..+.. +......+.... ...+++.|+.++ .+.++|..
T Consensus 226 ~~~~l~sg~~dg-----~v~~wd~~~~~~--~~~~~~------h~~~v~~v~fsp~g~~~lasgs~D~----~i~vwd~~ 288 (344)
T 4gqb_B 226 QSEVFVFGDENG-----TVSLVDTKSTSC--VLSSAV------HSQCVTGLVFSPHSVPFLASLSEDC----SLAVLDSS 288 (344)
T ss_dssp CTTEEEEEETTS-----EEEEEESCC--C--CEEEEC------CSSCEEEEEECSSSSCCEEEEETTS----CEEEECTT
T ss_pred CCcceEEeccCC-----cEEEEECCCCcE--EEEEcC------CCCCEEEEEEccCCCeEEEEEeCCC----eEEEEECC
Confidence 346777776433 477888876532 111111 111222333322 234556676654 57777775
Q ss_pred CC
Q 010847 324 PR 325 (499)
Q Consensus 324 ~~ 325 (499)
..
T Consensus 289 ~~ 290 (344)
T 4gqb_B 289 LS 290 (344)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 186
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.21 E-value=0.79 Score=44.87 Aligned_cols=146 Identities=11% Similarity=0.111 Sum_probs=67.0
Q ss_pred EEEEcCcCCCCCccCcEEEEECCCC---eeEEeeecCCCCCCCccceEEEE-c-CcEEEEEcCCCCCCCCCcEEEEECCC
Q 010847 146 LIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPPAPRYDHSAALH-A-NRYLIVFGGCSHSIFFNDLHVLDLQT 220 (499)
Q Consensus 146 lyv~GG~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~p~~r~~~~~~~~-~-~~~l~v~GG~~~~~~~~~i~~~d~~~ 220 (499)
+++.|+.+ ..+.+||+.+. .+.. ...............+.+ . ++.+++.|+.+ +.|.+||+.+
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRN 263 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCC
Confidence 67777653 35888998762 2211 100000011111222333 2 44466666543 4689999876
Q ss_pred Cc-eEecccCCCCCCcCcccEEEEE---CCEEEEEeCCCCCCCcceEEEEECCCCc--eEEeccCCCCCCCCCCCCceEE
Q 010847 221 NE-WSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLA--WSILTSVKGRNPLASEGLSVCS 294 (499)
Q Consensus 221 ~~-W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~--W~~l~~~~~~~p~~~~~~~~~~ 294 (499)
.. ...+.. ..........+.+ +..+++.|+.++ .+.+||+.+.. -..+.. +......
T Consensus 264 ~~~~~~~~~---~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~~~~~~~~~~~---------h~~~v~~ 326 (430)
T 2xyi_A 264 NNTSKPSHT---VDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRNLKLKLHSFES---------HKDEIFQ 326 (430)
T ss_dssp SCSSSCSEE---EECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTSCSEEEEC---------CSSCEEE
T ss_pred CCCCcceeE---eecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCCCCCCeEEeec---------CCCCEEE
Confidence 52 111100 0001111122223 234777877543 47888886532 111111 1122223
Q ss_pred EEEcC-ceEEEEEcCCCCCCCceEEEEECCC
Q 010847 295 AIIEG-EHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 295 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+.... ...+++.||.++ .+.+||+..
T Consensus 327 i~~sp~~~~~l~s~~~d~----~i~iwd~~~ 353 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDR----RLHVWDLSK 353 (430)
T ss_dssp EEECSSCTTEEEEEETTS----CCEEEEGGG
T ss_pred EEECCCCCCEEEEEeCCC----cEEEEeCCC
Confidence 33332 335666677654 577788755
No 187
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=93.20 E-value=1.5 Score=42.97 Aligned_cols=19 Identities=11% Similarity=0.305 Sum_probs=8.0
Q ss_pred HHHHHHHHHHhHHHHHHHH
Q 010847 459 IENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 459 ~~~e~~~~~~~~~~~~~~~ 477 (499)
|+..++.+.++++.++..+
T Consensus 173 L~~~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 173 LRAVIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444433
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.16 E-value=5.3 Score=36.95 Aligned_cols=155 Identities=6% Similarity=-0.066 Sum_probs=80.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.||+.+... ..+++||+.++....+.. .+ ...-++++.. ++++|+.+..+.. ..+.+++||+.+.
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~---~~-~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFV---SH-KANPAAIKIHKDGRLFVCYLGDFK--STGGIFAATENGD 122 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEE---CS-SSSEEEEEECTTSCEEEEECTTSS--SCCEEEEECTTSC
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEee---CC-CCCcceEEECCCCcEEEEeCCCCC--CCceEEEEeCCCC
Confidence 46788776532 349999999998876642 11 1112233332 5678877543211 1357999999887
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCC-CCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CC-E
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCS-HSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DE-N 247 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~-~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~ 247 (499)
....+... ......-..++...++.+|+..... .......++++|+.+.....+... . ....+++.. ++ .
T Consensus 123 ~~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~---~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 123 NLQDIIED--LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I---SVANGIALSTDEKV 195 (333)
T ss_dssp SCEEEECS--SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E---SSEEEEEECTTSSE
T ss_pred EEEEEEcc--CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C---CcccceEECCCCCE
Confidence 76533221 1112222233333456677654321 111235699999887666554211 0 111223332 33 4
Q ss_pred EEEEeCCCCCCCcceEEEEECCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
+|+.... .+.+++||+.+
T Consensus 196 l~v~~~~-----~~~i~~~d~~~ 213 (333)
T 2dg1_A 196 LWVTETT-----ANRLHRIALED 213 (333)
T ss_dssp EEEEEGG-----GTEEEEEEECT
T ss_pred EEEEeCC-----CCeEEEEEecC
Confidence 7766432 23688999853
No 189
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.13 E-value=13 Score=41.70 Aligned_cols=148 Identities=11% Similarity=0.069 Sum_probs=70.9
Q ss_pred EEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 94 KLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 94 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
.+++.|+.+ ..+.+||+.++.....- .... ....++.+ ++..++.|+.+ ..+.++|+.+..
T Consensus 714 ~~l~sg~~d------~~v~vwd~~~~~~~~~~---~~h~--~~v~~~~~sp~~~~l~s~s~d------g~v~vwd~~~~~ 776 (1249)
T 3sfz_A 714 LLLATGSND------FFLKLWDLNQKECRNTM---FGHT--NSVNHCRFSPDDELLASCSAD------GTLRLWDVRSAN 776 (1249)
T ss_dssp CEEEEEETT------SCEEEEETTSSSEEEEE---CCCS--SCEEEEEECSSTTEEEEEESS------SEEEEEEGGGTE
T ss_pred eEEEEEeCC------CeEEEEECCCcchhhee---cCCC--CCEEEEEEecCCCEEEEEECC------CeEEEEeCCCCc
Confidence 455555543 23889999888654332 1111 11122222 45566666643 358888887765
Q ss_pred eEEeeecCCC-------CC--CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEE
Q 010847 172 WDAVEVTQTP-------PA--PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGI 242 (499)
Q Consensus 172 W~~~~~~~~~-------p~--~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~ 242 (499)
-......... +. .....+++...++..+++++ .+.+..||+.+.........+ ....-.+++
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~------~~~v~~~d~~~~~~~~~~~~~---~~~~v~~~~ 847 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA------KNKVLLFDIHTSGLLAEIHTG---HHSTIQYCD 847 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE------TTEEEEEETTTCCEEEEEECS---SSSCCCEEE
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEc------CCcEEEEEecCCCceeEEcCC---CCCceEEEE
Confidence 3322211100 00 00111122223444555554 247899999887654421111 111111222
Q ss_pred EE-CCEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 243 TI-DENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 243 ~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
.. ++.++++|+.++ .+.+||+.+..
T Consensus 848 ~sp~~~~l~~~~~dg-----~v~vwd~~~~~ 873 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQY-----CVELWNIDSRL 873 (1249)
T ss_dssp ECSSTTEEEEECSSS-----CEEEEETTTTE
T ss_pred EcCCCCEEEEEeCCC-----eEEEEEcCCCc
Confidence 22 456777776443 47788887764
No 190
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.06 E-value=3.4 Score=42.77 Aligned_cols=151 Identities=13% Similarity=-0.003 Sum_probs=82.4
Q ss_pred CceEEEEECC-CC---cEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCC-C
Q 010847 108 SMIVRFIDLE-TN---LCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQT-P 181 (499)
Q Consensus 108 ~~~~~~yd~~-t~---~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~ 181 (499)
...++++|+. ++ ....+.. .. .......+. -+++||+.+..+. ...++.+|+.+.++..+..... .
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~---~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLG---GP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEE---ET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBS
T ss_pred CcEEEEEEECCCCcccccEEeCC---CC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccc
Confidence 3579999998 57 4444431 11 111122222 2567777665432 3469999998888887754211 0
Q ss_pred CCCCc---cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEE-EEECCEEEEEeCCCCC
Q 010847 182 PAPRY---DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAG-ITIDENWYIVGGGDNN 257 (499)
Q Consensus 182 p~~r~---~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~ 257 (499)
-.+.. ...++...++.+++.+.. ....+|.+|+.++....+.. +. .....+ ...++.+++..+...
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~----~~-~~~~~~~s~~~~~~~~~~~~~~- 357 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAG----PW-TEWAATLTVSGTRAVGVAASPR- 357 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCS----SC-CEEEEEEEEETTEEEEEEEETT-
T ss_pred cCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecC----CC-CeEEEEEecCCCEEEEEEcCCC-
Confidence 00111 112333345556665543 24578999998888776632 11 111222 334566666554322
Q ss_pred CCcceEEEEECCCCceEEec
Q 010847 258 NGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 258 ~~~~~~~~~d~~~~~W~~l~ 277 (499)
....+|.+|+.+...+.+.
T Consensus 358 -~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 358 -TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp -EEEEEEEEETTTCCEEEEE
T ss_pred -CCCEEEEEECCCCceEEee
Confidence 2347899999888877764
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.05 E-value=4.9 Score=36.24 Aligned_cols=177 Identities=11% Similarity=0.043 Sum_probs=92.3
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGV 123 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 123 (499)
..+.+||+. +.+....... ....-++++.. ++.||+.... ...+++||+. +....
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~----------------~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ----------------PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYE 138 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS----------------TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEE
T ss_pred CeEEEECCC-CCeEEecCCC----------------CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEE
Confidence 358899988 7776544321 01222333333 5778876432 2349999987 66665
Q ss_pred eecCCCCCCC-CcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEE
Q 010847 124 METSGKVPVA-RGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIV 200 (499)
Q Consensus 124 ~~~~g~~p~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v 200 (499)
.. .+.. ..-+.++. -+++||+.... .+.+++||+ +.+...+.. |........+.+ .++.+|+
T Consensus 139 ~~----~~~~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 139 YD----LPNKGSYPAFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp EE----CSSTTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEE
T ss_pred cc----CCCCCCCceeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCEEE
Confidence 43 1211 11223333 24578875421 346899998 666665432 112222233333 3555777
Q ss_pred EcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEe
Q 010847 201 FGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSIL 276 (499)
Q Consensus 201 ~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l 276 (499)
.... .+.+++||+ ++.+..... +........+.+ ++.+||.... .+.+.+||+ +......
T Consensus 204 ~~~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 204 VEIM-----GNKIGRITT-TGEISEYDI----PTPNARPHAITAGKNSEIWFTEWG-----ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EETT-----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECT-TSCEEEE
T ss_pred EccC-----CCEEEEEcC-CCcEEEEEC----CCCCCCceEEEECCCCCEEEeccC-----CCeEEEECC-CCcEEEE
Confidence 5422 246899998 556555421 111122222333 4577776531 236889998 4555544
No 192
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.92 E-value=5.8 Score=36.75 Aligned_cols=235 Identities=13% Similarity=0.058 Sum_probs=106.8
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-C----CEEEEEcccCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-G----TKLLILGGHYKKS 105 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~----~~iyv~GG~~~~~ 105 (499)
.+++.|+... .-..+.+||+.++.......... .....++.+ . +.+++.|+.++
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~~~l~~~~~dg-- 90 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEK-----------------AKPIKCGTFGATSLQQRYLATGDFGG-- 90 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEE-----------------SSCEEEEECTTCCTTTCCEEEEETTS--
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeecc-----------------cCcEEEEEEcCCCCCCceEEEecCCC--
Confidence 5666665411 12358899999887655433210 111122222 1 36666776533
Q ss_pred CCCceEEEEECCCCc--EEEeecCCCCCCCCcceEEEE-------ECCEEEEEcCcCCCCCccCcEEEEECCCCe--eEE
Q 010847 106 SDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTL-------VGSRLIIFGGEDRSRKLLNDVHFLDLETMT--WDA 174 (499)
Q Consensus 106 ~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~-------~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~ 174 (499)
.+.+||..+.. -..+. ....+. .++.. -++.+++.|+.+ ..+.+||+.+.. ...
T Consensus 91 ----~i~iwd~~~~~~~~~~~~---~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 91 ----NLHIWNLEAPEMPVYSVK---GHKEII--NAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp ----CEEEECTTSCSSCSEEEC---CCSSCE--EEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEE
T ss_pred ----eEEEEeCCCCCccEEEEE---ecccce--EEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCccee
Confidence 38888888765 22221 111111 11111 245566666643 358889987754 333
Q ss_pred eeecCCCCCCCccceEEE---E-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE----CC
Q 010847 175 VEVTQTPPAPRYDHSAAL---H-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI----DE 246 (499)
Q Consensus 175 ~~~~~~~p~~r~~~~~~~---~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~ 246 (499)
+..... ...+...+++. + .++.+++.|+.+ ..+.+||+.+..-..... ....-.+++.. ++
T Consensus 156 ~~~~~~-~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 156 MEPVQG-ENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETN-----IKNGVCSLEFDRKDISM 224 (357)
T ss_dssp ECCCTT-SCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEE-----CSSCEEEEEESCSSSSC
T ss_pred ccccCC-CCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecC-----CCCceEEEEcCCCCCCC
Confidence 322100 00111112221 1 344466666543 368999998876433211 11112233333 35
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcC-ceEEEEEcCCCCCCCceEEEEECCC
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEG-EHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
..+++|+.++ .+.+||+.+..- +..+... ....+......+.... ...+++.|+.++ .+.++|+..
T Consensus 225 ~~l~~~~~dg-----~i~i~d~~~~~~--~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~ 291 (357)
T 3i2n_A 225 NKLVATSLEG-----KFHVFDMRTQHP--TKGFASV-SEKAHKSTVWQVRHLPQNRELFLTAGGAG----GLHLWKYEY 291 (357)
T ss_dssp CEEEEEESTT-----EEEEEEEEEEET--TTEEEEE-EEECCSSCEEEEEEETTEEEEEEEEETTS----EEEEEEEEC
T ss_pred CEEEEECCCC-----eEEEEeCcCCCc--ccceeee-ccCCCcCCEEEEEECCCCCcEEEEEeCCC----cEEEeecCC
Confidence 6666665432 466777654320 0000000 0000111222333333 343677777765 677777654
No 193
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=92.88 E-value=7.5 Score=37.96 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=62.7
Q ss_pred ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCC---CCC
Q 010847 30 KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYK---KSS 106 (499)
Q Consensus 30 ~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~---~~~ 106 (499)
..+|+.-....... +.+.++|+.+++=...-+.+. .| +..+..-+..+|+.--... .+.
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~---------------~P--gia~SpDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGF---------------LP--HPVAAEDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECS---------------SC--EEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCC---------------CC--ceEECCCCCEEEEEeccccccccCC
Confidence 37888865322111 789999999887544333321 12 2222233567887631100 000
Q ss_pred CCceEEEEECCCCcEEE-eecCCCCC--CCCcceEEEE--ECCEEEEEcCcCCCCCccCcEEEEECCCCeeE
Q 010847 107 DSMIVRFIDLETNLCGV-METSGKVP--VARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD 173 (499)
Q Consensus 107 ~~~~~~~yd~~t~~W~~-~~~~g~~p--~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 173 (499)
..+.+.++|+.+++-.. +...+... ....-+.++. -+.++|+..-. ..+.+.++|+.+++-.
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEE
Confidence 13569999999987543 32110000 0111122222 34578886321 1467999999887653
No 194
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=92.88 E-value=1 Score=44.10 Aligned_cols=61 Identities=11% Similarity=0.198 Sum_probs=34.1
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCe----eEEeeecCCCCCCCccceEEEEc--CcEEEEEcCCCCCCCCCcEEEE
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMT----WDAVEVTQTPPAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVL 216 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~ 216 (499)
++.+++.|+.+ ..+.+||+.+.. -..+.. ......++.+. +.++++.|+.+ +.|.+|
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vw 305 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFNPYSEFILATGSAD-----KTVALW 305 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEEC------CSSCEEEEEECSSCTTEEEEEETT-----SEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeec------CCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEE
Confidence 45677776643 468999987652 111211 11222333343 33477777764 358999
Q ss_pred ECCC
Q 010847 217 DLQT 220 (499)
Q Consensus 217 d~~~ 220 (499)
|+.+
T Consensus 306 d~~~ 309 (430)
T 2xyi_A 306 DLRN 309 (430)
T ss_dssp ETTC
T ss_pred eCCC
Confidence 9876
No 195
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.80 E-value=9.6 Score=38.96 Aligned_cols=124 Identities=13% Similarity=0.105 Sum_probs=66.8
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCCCCCCc---ceEEEEECCEEEEEcCcCCCCCccCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARG---GHSVTLVGSRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~---~~~~~~~~~~lyv~GG~~~~~~~~~~ 161 (499)
+.++.++.||+.... +.++.+|..|++ |+.-........+.+ ..+.++.+++||+... ...
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~ 128 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DAS 128 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTE
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCE
Confidence 346679999998653 239999998874 876542111101111 1334567888887532 246
Q ss_pred EEEEECCCCe--eEEeeecCCCCCC-CccceEEEEcC----cEEEEEcCCCC-CCCCCcEEEEECCCCc--eEec
Q 010847 162 VHFLDLETMT--WDAVEVTQTPPAP-RYDHSAALHAN----RYLIVFGGCSH-SIFFNDLHVLDLQTNE--WSQP 226 (499)
Q Consensus 162 v~~yd~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~----~~l~v~GG~~~-~~~~~~i~~~d~~~~~--W~~~ 226 (499)
++.+|..|++ |+.-.. ..... ....+.++.++ ..++++|.... ......++.||+.+++ |+..
T Consensus 129 l~AlD~~TG~~~W~~~~~--~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKFA--DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EEEEESSSCCEEEEEECS--CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCCCEEeeecCC--CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 9999998874 875431 10000 01112233333 11334443211 1224579999998876 8753
No 196
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.79 E-value=7 Score=37.36 Aligned_cols=152 Identities=15% Similarity=0.093 Sum_probs=73.7
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
++++++.|+.+ ..+.++|+.+.+-...-. + ....-.++....++..++.|+.+ ..+.++|+.+..
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~-~---h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQ-G---HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEc-c---CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCe
Confidence 45667777653 358999998876533321 1 11111223333344456666644 368899998876
Q ss_pred eEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCc
Q 010847 223 WSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE 300 (499)
Q Consensus 223 W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~ 300 (499)
....-. . .....+++.. ++.+++.|+.++ .+.+||+.+..-......... ....+......+....+
T Consensus 199 ~~~~~~-~----~~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 199 CSLTLS-I----EDGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENE-SGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEEE-C----SSCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTT
T ss_pred eEEEEE-c----CCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeeccccc-CCCCCCCCEEEEEECCC
Confidence 543211 0 1111122222 456777776543 377889877654322111100 00111222333444333
Q ss_pred eEEEEEcCCCCCCCceEEEEECCC
Q 010847 301 HHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 301 ~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
..+++.|+.++ .+.++|+..
T Consensus 268 g~~l~s~s~d~----~v~~wd~~~ 287 (393)
T 1erj_A 268 GQSVVSGSLDR----SVKLWNLQN 287 (393)
T ss_dssp SSEEEEEETTS----EEEEEEC--
T ss_pred CCEEEEEeCCC----EEEEEECCC
Confidence 34556677655 677777754
No 197
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.66 E-value=7.3 Score=37.24 Aligned_cols=105 Identities=17% Similarity=0.170 Sum_probs=57.2
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
+++.++.|+.++ .+.+||+.++.-...- .... ..-.+++.. ++..++.|+.+ ..+.++|+.+.
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~---~~h~-~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMIL---QGHE-QDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE---CCCS-SCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEE---ccCC-CCEEEEEEcCCCCEEEEecCC------CcEEEEECCCC
Confidence 456677776533 3899999887644332 1111 111222222 34555666543 35889999887
Q ss_pred eeEEeeecCCCCCCCccceEEEE-c-CcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALH-A-NRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~-~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
+....-.. ......+.+ . ++.+++.|+.+ ..+.+||+.+..-
T Consensus 198 ~~~~~~~~------~~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~ 241 (393)
T 1erj_A 198 QCSLTLSI------EDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFL 241 (393)
T ss_dssp EEEEEEEC------SSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCE
T ss_pred eeEEEEEc------CCCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcE
Confidence 65433221 111222333 2 55577777754 3588999887653
No 198
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.65 E-value=0.65 Score=56.56 Aligned_cols=12 Identities=8% Similarity=0.385 Sum_probs=6.6
Q ss_pred ccccCCCCCeEE
Q 010847 6 WHLELPYDLWVT 17 (499)
Q Consensus 6 ~~~~~~~~~W~~ 17 (499)
|.+|+..++|..
T Consensus 1252 y~~~~~~~~w~~ 1263 (3245)
T 3vkg_A 1252 YSVSIDDANWSL 1263 (3245)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEECCCCeeee
Confidence 444555666653
No 199
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.46 E-value=5.3 Score=37.84 Aligned_cols=109 Identities=7% Similarity=-0.036 Sum_probs=56.2
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCc-------EEEeecCCCCCCCCcceEEEE-EC----C---EEEEEcC
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNL-------CGVMETSGKVPVARGGHSVTL-VG----S---RLIIFGG 151 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-------W~~~~~~g~~p~~r~~~~~~~-~~----~---~lyv~GG 151 (499)
.++.+...+++.|+.+ ..+.+||+.+.. -..+. ....+. .+++. -+ + .+++.|+
T Consensus 20 ~~~~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~---~h~~~v--~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 20 FSVSACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHF---VHKSGL--HHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp EEEEECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEE---CCTTCE--EEEEEEEEEETTTEEEEEEEEEE
T ss_pred EEEEecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEe---cCCCcE--EEEEEecccccCCccccEEEEEc
Confidence 3344445677777653 348889988876 33332 111111 12222 23 5 7777776
Q ss_pred cCCCCCccCcEEEEECCCCe------eEEeeecCCCCCC---CccceEEEE----cCcEE-EEEcCCCCCCCCCcEEEEE
Q 010847 152 EDRSRKLLNDVHFLDLETMT------WDAVEVTQTPPAP---RYDHSAALH----ANRYL-IVFGGCSHSIFFNDLHVLD 217 (499)
Q Consensus 152 ~~~~~~~~~~v~~yd~~t~~------W~~~~~~~~~p~~---r~~~~~~~~----~~~~l-~v~GG~~~~~~~~~i~~~d 217 (499)
.+ ..+.+||+.+.. +..+... +.. ..-.++... .++.. ++.|+.+ ..+.+||
T Consensus 89 ~d------g~i~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd 154 (397)
T 1sq9_A 89 FS------GDLLFYRITREDETKKVIFEKLDLL---DSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWK 154 (397)
T ss_dssp TT------SCEEEEEEEECTTTCCEEEEEECCS---CTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEE
T ss_pred CC------CCEEEEEccCCcccccccceeeccc---ccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEe
Confidence 53 358888887665 5555421 100 112223333 34445 7777654 3588888
Q ss_pred CCC
Q 010847 218 LQT 220 (499)
Q Consensus 218 ~~~ 220 (499)
+.+
T Consensus 155 ~~~ 157 (397)
T 1sq9_A 155 FHP 157 (397)
T ss_dssp EES
T ss_pred CCc
Confidence 766
No 200
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.43 E-value=0.89 Score=55.42 Aligned_cols=14 Identities=14% Similarity=0.354 Sum_probs=9.5
Q ss_pred EEEEcCCCceEEee
Q 010847 48 QVFDLRSLAWSNLR 61 (499)
Q Consensus 48 ~~yd~~t~~W~~~~ 61 (499)
+.+|+.++.|....
T Consensus 1252 y~~~~~~~~w~~W~ 1265 (3245)
T 3vkg_A 1252 YSVSIDDANWSLWK 1265 (3245)
T ss_dssp EEECTTTCSEEETT
T ss_pred EEEECCCCeeeehh
Confidence 45577788887744
No 201
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.35 E-value=8 Score=36.96 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=52.9
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcE-EEEEcCCCCCCCCCcEEEEECCC
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRY-LIVFGGCSHSIFFNDLHVLDLQT 220 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~-l~v~GG~~~~~~~~~i~~~d~~~ 220 (499)
++.+++.|+.+ ..+.+||+.+..-...... . .......+.+ .++. +++.|+.+ ..+.+||+.+
T Consensus 258 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~ 322 (420)
T 3vl1_A 258 YGKYVIAGHVS------GVITVHNVFSKEQTIQLPS---K-FTCSCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRS 322 (420)
T ss_dssp TTEEEEEEETT------SCEEEEETTTCCEEEEECC---T-TSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred CCCEEEEEcCC------CeEEEEECCCCceeEEccc---c-cCCCceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCC
Confidence 45666666643 3589999987653322211 1 1112223333 3433 66666644 3689999887
Q ss_pred Cce--EecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 221 NEW--SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 221 ~~W--~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
..- ..+.. . ....-.++...++.+++.|+.++ .+.+||+..
T Consensus 323 ~~~~~~~~~~--~--~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 323 PECPVGEFLI--N--EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp TTSCSEEEEE--S--TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred CcCchhhhhc--c--CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 542 22211 0 11112233344677777777442 366666544
No 202
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=92.28 E-value=1.3 Score=31.62 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=5.0
Q ss_pred HHHHHHHHhHHHH
Q 010847 461 NEVQILRQQKSAF 473 (499)
Q Consensus 461 ~e~~~~~~~~~~~ 473 (499)
.+....+.++..+
T Consensus 62 ~E~~~wq~Rl~~L 74 (81)
T 2jee_A 62 EQQNGWQERLQAL 74 (81)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333334443333
No 203
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=92.27 E-value=3 Score=31.86 Aligned_cols=75 Identities=9% Similarity=0.101 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhhhHHHHH----hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH
Q 010847 383 IDAIKEDKRVLELSLTEVRT----ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
...|..+...|...+..... .+..|+.++.......+.....+.++.+.+..+....+-.-..+.+++.++-..-
T Consensus 12 ~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ai 90 (111)
T 2v66_B 12 NQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAI 90 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44555555555544444332 3555666666666666666666666666666666666666666666666654443
No 204
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.26 E-value=6.2 Score=35.52 Aligned_cols=191 Identities=8% Similarity=0.065 Sum_probs=93.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.||+.+... ...+.+||.....-..+. .... ..-+.++. -+++||+.... .+.+++||+...
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~---~~~~-~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~ 152 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFG---ATIL-QHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGN 152 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEEC---TTTC-SCEEEEEECTTSCEEEEETT------TTEEEEECTTSC
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEec---CccC-CCceEEEEeCCCCEEEEECC------CCEEEEEcCCCC
Confidence 67899876321 234899995544333332 1111 11123333 24678886542 346899997655
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWY 249 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~ 249 (499)
....+...+.. ..-..++...++.+|+.+.. .+.|++||+.......+...+... .-.+++.. ++.+|
T Consensus 153 ~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 153 VLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEIL 221 (286)
T ss_dssp EEEEEECTTTC---SSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEE
T ss_pred EEEEeCCCCcc---CCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEE
Confidence 44444321111 11123333446678876532 256999998665444432111111 11223332 45788
Q ss_pred EEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 250 IVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 250 v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
|....+. ..+.+||+....-..+..... ......+.++.+..||+.. .+ +.+.+|++..
T Consensus 222 v~~~~~~----~~i~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~~~g~l~vs~-~~----~~v~v~~~~~ 280 (286)
T 1q7f_A 222 IADNHNN----FNLTIFTQDGQLISALESKVK-------HAQCFDVALMDDGSVVLAS-KD----YRLYIYRYVQ 280 (286)
T ss_dssp EEECSSS----CEEEEECTTSCEEEEEEESSC-------CSCEEEEEEETTTEEEEEE-TT----TEEEEEECSC
T ss_pred EEeCCCC----EEEEEECCCCCEEEEEcccCC-------CCcceeEEECCCCcEEEEC-CC----CeEEEEEccc
Confidence 8764321 158899976554333322110 0111223333334577664 22 3677777643
No 205
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.23 E-value=6.4 Score=35.60 Aligned_cols=183 Identities=10% Similarity=0.076 Sum_probs=80.9
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCc-EEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNL-CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.+++.|+.++ .+..+++.... ...+. .+........++.+++.+++.|+.+ ..+.+||....
T Consensus 70 ~~~~l~~~~~dg------~i~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~l~~~~~d------~~i~~~d~~~~ 134 (313)
T 3odt_A 70 EKELLLFGGKDT------MINGVPLFATSGEDPLY---TLIGHQGNVCSLSFQDGVVISGSWD------KTAKVWKEGSL 134 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTCCTTSCC-C---EECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTEE
T ss_pred CCCEEEEecCCC------eEEEEEeeecCCCCccc---chhhcccCEEEEEecCCEEEEEeCC------CCEEEEcCCcE
Confidence 455666666533 27777765432 11111 1111112223333455566666643 35788883222
Q ss_pred eeEEeeecCCCCCCCccceEEEE--cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
... +. .. ...-.++... +++ .++.|+.+ ..+.+||..... ..+ . .+....-.+++.. ++.
T Consensus 135 ~~~-~~---~~--~~~v~~~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~-~~~---~-~~~~~~i~~~~~~~~~~ 197 (313)
T 3odt_A 135 VYN-LQ---AH--NASVWDAKVVSFSEN-KFLTASAD-----KTIKLWQNDKVI-KTF---S-GIHNDVVRHLAVVDDGH 197 (313)
T ss_dssp EEE-EE---CC--SSCEEEEEEEETTTT-EEEEEETT-----SCEEEEETTEEE-EEE---C-SSCSSCEEEEEEEETTE
T ss_pred EEe-cc---cC--CCceeEEEEccCCCC-EEEEEECC-----CCEEEEecCceE-EEE---e-ccCcccEEEEEEcCCCe
Confidence 221 11 11 1111222222 344 56666644 358888833221 111 1 1111112233333 455
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
++.|+.++ .+.+||+.+..-... +.. +......+....+.. ++.|+.++ .+.+||+...
T Consensus 198 -~~~~~~dg-----~i~i~d~~~~~~~~~--~~~------~~~~i~~~~~~~~~~-l~~~~~dg----~v~iwd~~~~ 256 (313)
T 3odt_A 198 -FISCSNDG-----LIKLVDMHTGDVLRT--YEG------HESFVYCIKLLPNGD-IVSCGEDR----TVRIWSKENG 256 (313)
T ss_dssp -EEEEETTS-----EEEEEETTTCCEEEE--EEC------CSSCEEEEEECTTSC-EEEEETTS----EEEEECTTTC
T ss_pred -EEEccCCC-----eEEEEECCchhhhhh--hhc------CCceEEEEEEecCCC-EEEEecCC----EEEEEECCCC
Confidence 66665432 588899877653321 111 011223333433333 45566654 6888887655
No 206
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.13 E-value=6.7 Score=35.61 Aligned_cols=92 Identities=11% Similarity=0.026 Sum_probs=43.0
Q ss_pred CcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCC
Q 010847 211 NDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASE 288 (499)
Q Consensus 211 ~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~ 288 (499)
..+.++|..+..-..... .. .....++.. ++.+++.+|..+. .+.+||+.+..-. ..+.+.
T Consensus 221 ~~i~lwd~~~~~~~~~~~---~~--~~v~~~~~~~~~~~~~~~sg~~d~----~i~iwd~~~~~~~--~~l~gH------ 283 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVD---AH--SQVCSILWSPHYKELISGHGFAQN----QLVIWKYPTMAKV--AELKGH------ 283 (318)
T ss_dssp CEEEEEETTTCCEEEEEE---CS--SCEEEEEEETTTTEEEEEECTTTC----CEEEEETTTCCEE--EEECCC------
T ss_pred CEEEEEeccccccccccc---ce--eeeeeeeecccccceEEEEEcCCC----EEEEEECCCCcEE--EEEcCC------
Confidence 357788877665433211 11 111122222 3455555553322 4788998776532 222211
Q ss_pred CCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 289 GLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 289 ~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
......+....+..+++.||.++ .+.++|+.
T Consensus 284 ~~~V~~l~~spdg~~l~S~s~D~----~v~iWd~~ 314 (318)
T 4ggc_A 284 TSRVLSLTMSPDGATVASAAADE----TLRLWRCF 314 (318)
T ss_dssp SSCEEEEEECTTSSCEEEEETTT----EEEEECCS
T ss_pred CCCEEEEEEcCCCCEEEEEecCC----eEEEEECC
Confidence 11223333333333566677665 56666653
No 207
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=92.06 E-value=9.8 Score=37.33 Aligned_cols=283 Identities=12% Similarity=-0.043 Sum_probs=120.9
Q ss_pred cccceEEEEcCCCC--CcccCcEEEEEcC--CCceEEeeeCcccccCccccCCCC-CCCCCccceeEE--EECCEEEEEc
Q 010847 27 PRYKKLYIVGGSRN--GRFLSDVQVFDLR--SLAWSNLRLETELDADKTEDSGLL-EVLPPMSDHCMV--KWGTKLLILG 99 (499)
Q Consensus 27 ~r~~~l~~~GG~~~--~~~~~~~~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~s~~--~~~~~iyv~G 99 (499)
||-..+|++.+..+ ......+.+.|.. +.+..++-.....+...+|.++++ +.-..+.+.... .-+.+||+-|
T Consensus 23 ~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~ 102 (462)
T 2ece_A 23 PPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPG 102 (462)
T ss_dssp CCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEB
T ss_pred CcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEcc
Confidence 33448888887642 2234456666665 444433322111112233333311 000111111112 3356788777
Q ss_pred ccCCCCCCCceEEEEECCCC----cEEEeecCCCC--CCCC-cceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 100 GHYKKSSDSMIVRFIDLETN----LCGVMETSGKV--PVAR-GGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 100 G~~~~~~~~~~~~~yd~~t~----~W~~~~~~g~~--p~~r-~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
..+ +.++++|..++ +-......... +.+. .-|.+.+ -++ |||-.--+..+...+.+..+|..|.+
T Consensus 103 l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 103 LRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp TTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred CCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 653 44999999876 22222100000 0111 1233333 345 77642111122235789999999876
Q ss_pred eEEeeecCCCCCCCccceEEEEc-CcEEEEEc---------CCCCC----CCCCcEEEEECCCCceEe-cccCCCCCCcC
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHA-NRYLIVFG---------GCSHS----IFFNDLHVLDLQTNEWSQ-PEIKGDLVTGR 236 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~G---------G~~~~----~~~~~i~~~d~~~~~W~~-~~~~~~~p~~r 236 (499)
-..--..+..|.. ..+.+-... .+.+|+-- |.... ...+.|++||+.+.+-.. +.....-..||
T Consensus 176 v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~ 254 (462)
T 2ece_A 176 PLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMAL 254 (462)
T ss_dssp EEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEE
T ss_pred EEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccc
Confidence 4332222222211 122222222 34333331 22211 346889999998764222 11100000111
Q ss_pred cccEEEEE---CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccC--CCC-----CCCCC------CCCceEEEEEcCc
Q 010847 237 AGHAGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV--KGR-----NPLAS------EGLSVCSAIIEGE 300 (499)
Q Consensus 237 ~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~--~~~-----~p~~~------~~~~~~~~~~~~~ 300 (499)
|....+ +..+||..-.+.....+.+++|....+.|..+... +.. .|... ........+..++
T Consensus 255 --~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 255 --ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp --EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred --eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 111111 33566665433333334566555545777654321 110 01000 1122223333444
Q ss_pred eEEEEEcCCCCCCCceEEEEECC
Q 010847 301 HHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 301 ~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
.+|||--- ..+.+.+||+.
T Consensus 333 rfLYVSnr----g~d~VavfdV~ 351 (462)
T 2ece_A 333 KFLYLSLW----GIGEVRQYDIS 351 (462)
T ss_dssp CEEEEEET----TTTEEEEEECS
T ss_pred CEEEEEeC----CCCEEEEEEec
Confidence 67776432 23589999985
No 208
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.04 E-value=3.8 Score=46.10 Aligned_cols=189 Identities=14% Similarity=0.116 Sum_probs=91.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
++..++.|+.++ .+.+||..++...... ..........+..-+++.++.||.+ ..+.+||+.+..
T Consensus 972 ~g~~l~~g~~~g------~i~i~d~~~~~~~~~~---~~h~~~v~~l~~s~dg~~l~s~~~d------g~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 972 HLEYVAFGDEDG------AIKIIELPNNRVFSSG---VGHKKAVRHIQFTADGKTLISSSED------SVIQVWNWQTGD 1036 (1249)
T ss_dssp TSSEEEEEETTS------CCEEEETTTTSCEEEC---CCCSSCCCCEEECSSSSCEEEECSS------SBEEEEETTTTE
T ss_pred CCCEEEEEcCCC------CEEEEEcCCCceeeec---ccCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCc
Confidence 455666666432 3888898877643332 1111111111222245666666653 358999999887
Q ss_pred eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEE
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIV 251 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~ 251 (499)
...+.. ....-.++....++. ++.|+.+ ..+.+||+.++.-...-. + ........+..-++.+++.
T Consensus 1037 ~~~~~~-----~~~~v~~~~~~~~~~-l~~~~~d-----g~v~vwd~~~~~~~~~~~-~--~~~~v~~~~~s~d~~~l~s 1102 (1249)
T 3sfz_A 1037 YVFLQA-----HQETVKDFRLLQDSR-LLSWSFD-----GTVKVWNVITGRIERDFT-C--HQGTVLSCAISSDATKFSS 1102 (1249)
T ss_dssp EECCBC-----CSSCEEEEEECSSSE-EEEEESS-----SEEEEEETTTTCCCEEEE-C--CSSCCCCEEECSSSSSCEE
T ss_pred eEEEec-----CCCcEEEEEEcCCCc-EEEEECC-----CcEEEEECCCCceeEEEc-c--cCCcEEEEEECCCCCEEEE
Confidence 653321 111222233334554 4555543 368899987765332110 1 1111111122224566677
Q ss_pred eCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCCC
Q 010847 252 GGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 252 GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 326 (499)
|+.++ .+.+||+.+..- +..+. .+......+....+..+++.|+.++ .+.+||+....
T Consensus 1103 ~s~d~-----~v~iwd~~~~~~--~~~l~------~h~~~v~~~~~s~dg~~lat~~~dg----~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1103 TSADK-----TAKIWSFDLLSP--LHELK------GHNGCVRCSAFSLDGILLATGDDNG----EIRIWNVSDGQ 1160 (1249)
T ss_dssp ECCSS-----CCCEECSSSSSC--SBCCC------CCSSCEEEEEECSSSSEEEEEETTS----CCCEEESSSSC
T ss_pred EcCCC-----cEEEEECCCcce--eeeec------cCCCcEEEEEECCCCCEEEEEeCCC----EEEEEECCCCc
Confidence 76543 356777665431 11111 1112223333433334566677655 46778876543
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.94 E-value=7.3 Score=35.58 Aligned_cols=196 Identities=8% Similarity=-0.052 Sum_probs=95.1
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||++.-. ...++.||+.++........ .+.. +++.. ++.+|+.. ..
T Consensus 26 ~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------------------~~~~-~i~~~~dG~l~v~~--------~~ 73 (297)
T 3g4e_A 26 SLLFVDIP-----AKKVCRWDSFTKQVQRVTMD------------------APVS-SVALRQSGGYVATI--------GT 73 (297)
T ss_dssp EEEEEETT-----TTEEEEEETTTCCEEEEECS------------------SCEE-EEEEBTTSSEEEEE--------TT
T ss_pred EEEEEECC-----CCEEEEEECCCCcEEEEeCC------------------CceE-EEEECCCCCEEEEE--------CC
Confidence 67766542 24689999998876544321 1212 22222 45666643 13
Q ss_pred eEEEEECCCCcEEEeecCCC-CCCCCcceEEEEECCEEEEEcCcCCC------CCccCcEEEEECCCCeeEEeeecCCCC
Q 010847 110 IVRFIDLETNLCGVMETSGK-VPVARGGHSVTLVGSRLIIFGGEDRS------RKLLNDVHFLDLETMTWDAVEVTQTPP 182 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~-~p~~r~~~~~~~~~~~lyv~GG~~~~------~~~~~~v~~yd~~t~~W~~~~~~~~~p 182 (499)
.+++||+.+++++.+..... .+..+....++.-+++||+-. .... ......++.+++. .+...+......
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~-~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~- 150 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGT-MAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDI- 150 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEE-EECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESB-
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEec-CCcccccccccCCCcEEEEEECC-CCEEEEeecccc-
Confidence 49999999999887763211 121222222222256777632 1111 0123468888875 333333221011
Q ss_pred CCCccceEEEEc-CcEEEEEcCCCCCCCCCcEEEEEC--CCCceEecccCCCCCC-cCcccEEEEE-CCEEEEEeCCCCC
Q 010847 183 APRYDHSAALHA-NRYLIVFGGCSHSIFFNDLHVLDL--QTNEWSQPEIKGDLVT-GRAGHAGITI-DENWYIVGGGDNN 257 (499)
Q Consensus 183 ~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~--~~~~W~~~~~~~~~p~-~r~~~~~~~~-~~~l~v~GG~~~~ 257 (499)
-..++... ++.+|+.... .+.|++||+ .++.......-...+. ...-..++.- ++.+||.....
T Consensus 151 ----pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-- 219 (297)
T 3g4e_A 151 ----SNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-- 219 (297)
T ss_dssp ----EEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT--
T ss_pred ----ccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC--
Confidence 12233333 3457776532 256888886 4554332110001111 1111233332 45787764311
Q ss_pred CCcceEEEEECCCCceEE
Q 010847 258 NGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 258 ~~~~~~~~~d~~~~~W~~ 275 (499)
..+++||+.++....
T Consensus 220 ---~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 220 ---GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ---TEEEEECTTTCCEEE
T ss_pred ---CEEEEEcCCCceEEE
Confidence 258999998776543
No 210
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=91.85 E-value=1 Score=46.00 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=5.2
Q ss_pred hhccchHHHHHHH
Q 010847 414 VNSTHSELSKELS 426 (499)
Q Consensus 414 ~~~~~~~~~~~~~ 426 (499)
....+.+.+++++
T Consensus 478 ~d~~l~~~~k~~~ 490 (592)
T 1f5n_A 478 TDQTLTEKEKEIE 490 (592)
T ss_dssp HCSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444433
No 211
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=91.84 E-value=2 Score=33.65 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHhHH
Q 010847 458 TIENEVQILRQQKS 471 (499)
Q Consensus 458 ~~~~e~~~~~~~~~ 471 (499)
.|+.+++-+..++.
T Consensus 87 dLE~~iesL~eEl~ 100 (119)
T 3ol1_A 87 DLERKVESLQEEIA 100 (119)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555544444
No 212
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.80 E-value=8.1 Score=35.83 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=36.1
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.++ .+.+||+.++.-..... ...........+.+ ++..++.|+.+ ..+.+||+.+
T Consensus 127 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~ 192 (366)
T 3k26_A 127 DPNLLLSVSKDH------ALRLWNIQTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMD------HSLKLWRINS 192 (366)
T ss_dssp CTTEEEEEETTS------CEEEEETTTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETT------SCEEEEESCS
T ss_pred CCCEEEEEeCCC------eEEEEEeecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCC------CCEEEEECCC
Confidence 456777776533 39999998876544321 11111222223333 34566666643 3588888876
Q ss_pred C
Q 010847 170 M 170 (499)
Q Consensus 170 ~ 170 (499)
.
T Consensus 193 ~ 193 (366)
T 3k26_A 193 K 193 (366)
T ss_dssp H
T ss_pred C
Confidence 4
No 213
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=91.74 E-value=2.1 Score=31.52 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhccc
Q 010847 456 SQTIENEVQILRQQKSAFEQEMERATSVQ 484 (499)
Q Consensus 456 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~q 484 (499)
+...+.....+..++..++..+.+++++.
T Consensus 58 l~eaEe~~~~L~~~K~eLE~~l~el~~rl 86 (89)
T 3bas_A 58 MKQLEDKVEELLSKNYHLENEVARLKKLV 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555566666666666666555544
No 214
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=91.74 E-value=1 Score=35.86 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=8.7
Q ss_pred hhhhHHHHHHhhccchHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKEL 425 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~ 425 (499)
+..|+.+++..+.+...++..+
T Consensus 45 iq~L~~el~~l~~~~~~LE~~l 66 (129)
T 3tnu_B 45 IQRLRAEIDNVKKQCANLQNAI 66 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHH
Confidence 3334444444443333333333
No 215
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=91.73 E-value=0.68 Score=32.95 Aligned_cols=10 Identities=30% Similarity=0.046 Sum_probs=3.8
Q ss_pred HHHHHHHhHH
Q 010847 462 EVQILRQQKS 471 (499)
Q Consensus 462 e~~~~~~~~~ 471 (499)
|+..+.+++.
T Consensus 49 Elk~l~e~Ld 58 (79)
T 3cvf_A 49 EVGRAAQLLD 58 (79)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3333333333
No 216
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=91.71 E-value=6.5 Score=36.39 Aligned_cols=153 Identities=12% Similarity=0.126 Sum_probs=73.3
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C----CEEEEEcCcCCCCCccCcEEEEEC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-G----SRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~----~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
..+++.|+.... ...+.+||+.++........ .... ...++.+ . +.+++.|+.+ ..+.+||+
T Consensus 31 ~~l~~~~s~~~~---d~~v~iw~~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~ 97 (357)
T 3i2n_A 31 AKFVTMGNFARG---TGVIQLYEIQHGDLKLLREI---EKAK-PIKCGTFGATSLQQRYLATGDFG------GNLHIWNL 97 (357)
T ss_dssp SEEEEEEC--CC---CEEEEEEEECSSSEEEEEEE---EESS-CEEEEECTTCCTTTCCEEEEETT------SCEEEECT
T ss_pred ceEEEecCccCC---CcEEEEEeCCCCcccceeee---cccC-cEEEEEEcCCCCCCceEEEecCC------CeEEEEeC
Confidence 366667654211 23588999988876655321 1111 1122222 2 3666666643 35888888
Q ss_pred CCCe--eEEeeecCCCCCCCccceEEE------EcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEecccCCCCCCcCc
Q 010847 168 ETMT--WDAVEVTQTPPAPRYDHSAAL------HANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRA 237 (499)
Q Consensus 168 ~t~~--W~~~~~~~~~p~~r~~~~~~~------~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~ 237 (499)
.+.. -..+.. ...+. .++.. ..++.+++.|+.+ ..+.+||+.+.. ...+.. ......+.
T Consensus 98 ~~~~~~~~~~~~---~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~-~~~~~~~~ 166 (357)
T 3i2n_A 98 EAPEMPVYSVKG---HKEII--NAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEP-VQGENKRD 166 (357)
T ss_dssp TSCSSCSEEECC---CSSCE--EEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECC-CTTSCCCC
T ss_pred CCCCccEEEEEe---cccce--EEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccc-cCCCCCCc
Confidence 7664 222211 00111 11111 1234466666654 358899987764 222211 01111112
Q ss_pred ccEEEE-----ECCEEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 238 GHAGIT-----IDENWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 238 ~~~~~~-----~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
-.+++. -++.+++.|+.++ .+.+||+.+..-.
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNG-----DIKLFDLRNMALR 203 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTS-----EEEEEETTTTEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCC-----eEEEEECccCcee
Confidence 222221 2456667666332 5889998887643
No 217
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=91.70 E-value=2.1 Score=30.52 Aligned_cols=15 Identities=20% Similarity=0.494 Sum_probs=5.6
Q ss_pred hHHHHHHhhccchHH
Q 010847 407 FREKIDEVNSTHSEL 421 (499)
Q Consensus 407 l~~~~~~~~~~~~~~ 421 (499)
|+.++++++.++..+
T Consensus 25 LqmEieELKekN~~L 39 (81)
T 2jee_A 25 LQMEIEELKEKNNSL 39 (81)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 218
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.69 E-value=8.3 Score=35.73 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=48.3
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEE---ECCEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVK---WGTKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~---~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
.+.+||+.++......... ..-.+++. -++.+++.|+.+ ..+.+||+.++.-.
T Consensus 109 ~v~iwd~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHD------------------APVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPM 164 (368)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCS
T ss_pred cEEEEEcCCCCceeecccc------------------CceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEE
Confidence 5889999988765543221 11112222 246777777753 34889998876532
Q ss_pred EeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 123 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 123 ~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
..- ..+ ....++....+.+++.++ ...+.+||+....
T Consensus 165 ~~~---~~~--~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 165 MVL---QLP--ERCYCADVIYPMAVVATA-------ERGLIVYQLENQP 201 (368)
T ss_dssp EEE---ECS--SCEEEEEEETTEEEEEEG-------GGCEEEEECSSSC
T ss_pred EEE---ecC--CCceEEEecCCeeEEEeC-------CCcEEEEEecccc
Confidence 221 111 123334444555554433 3357888886653
No 219
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=91.57 E-value=1.9 Score=34.19 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH-------HHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-------TIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~-------~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
++..-..+...++....++.++.+.+.+|.++. +++.+++++.....+..+.++.+.
T Consensus 64 ye~ai~n~~sA~~~~d~lekKl~~aq~kL~~L~P~~P~Yak~~a~~~q~~~d~~~~~~~~~kA~ 127 (158)
T 3tul_A 64 YEASIKKTDTAKSVYDAATKKLTQAQNKLQSLDPADPGYAQAEAAVEQAGKEATEAKEALDKAT 127 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334455556777777777888888887777 778888888777776666665443
No 220
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=91.53 E-value=1.5 Score=30.59 Aligned_cols=10 Identities=10% Similarity=0.122 Sum_probs=3.7
Q ss_pred HHHHHHHhHH
Q 010847 462 EVQILRQQKS 471 (499)
Q Consensus 462 e~~~~~~~~~ 471 (499)
++..+.+++.
T Consensus 43 Elk~~~e~Ld 52 (72)
T 3cve_A 43 NLKTLLEILD 52 (72)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3333333333
No 221
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=91.53 E-value=0.54 Score=35.15 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=13.4
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQL 432 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (499)
...++.+++.++.+...+.+++..++.++
T Consensus 14 ~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 14 ADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555444444444444333
No 222
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.48 E-value=7.2 Score=34.60 Aligned_cols=187 Identities=10% Similarity=0.011 Sum_probs=90.6
Q ss_pred CCEEEE-EcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLI-LGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv-~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.||+ .... ...+.+||+.+......... .. ..-++++.. ++.||+... .+.++.||+.+
T Consensus 34 ~g~l~v~~~~~------~~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~ 96 (270)
T 1rwi_B 34 AGNVYVTSEGM------YGRVVKLATGSTGTTVLPFN-GL---YQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGS 96 (270)
T ss_dssp TCCEEEEECSS------SCEEEEECC-----EECCCC-SC---CSCCCEEECTTCCEEEEET-------TTEEEEECTTC
T ss_pred CCCEEEEccCC------CCcEEEecCCCcccceEeeC-Cc---CCcceeEECCCCCEEEEcC-------CCEEEEEeCCC
Confidence 467888 4322 23488999877665443211 11 111233333 457888754 13589999887
Q ss_pred CeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENW 248 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 248 (499)
.....+...+ ...-+.++...++.+|+.... .+.+++|+..+........ ... ..-.+++.. ++.+
T Consensus 97 ~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~-~~~---~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 97 NNQTVLPFDG----LNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPF-TGL---NDPDGVAVDNSGNV 163 (270)
T ss_dssp SCCEECCCCS----CSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCC-CSC---CSCCCEEECTTCCE
T ss_pred ceEeeeecCC----cCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeecc-ccC---CCceeEEEeCCCCE
Confidence 6554332111 111223333335667776432 2468888766554433211 111 111233333 4678
Q ss_pred EEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 249 YIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 249 ~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
|+.... ...+.+||+.+..-....... . .....+.++.+..||+....+ +.+++|++...
T Consensus 164 ~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-------~-~~p~~i~~d~~g~l~v~~~~~----~~v~~~~~~~~ 223 (270)
T 1rwi_B 164 YVTDTD-----NNRVVKLEAESNNQVVLPFTD-------I-TAPWGIAVDEAGTVYVTEHNT----NQVVKLLAGST 223 (270)
T ss_dssp EEEEGG-----GTEEEEECTTTCCEEECCCSS-------C-CSEEEEEECTTCCEEEEETTT----SCEEEECTTCS
T ss_pred EEEECC-----CCEEEEEecCCCceEeecccC-------C-CCceEEEECCCCCEEEEECCC----CcEEEEcCCCC
Confidence 877542 236889998776543321111 0 122234444444667654332 36888887654
No 223
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=91.40 E-value=3.4 Score=31.93 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=13.5
Q ss_pred HHhhccchHHHHHHHHHHHHHHHhhhhhhHHHH
Q 010847 412 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEA 444 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (499)
+++++.+..-.+++-.++.++...++..++.+.
T Consensus 49 DQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~ 81 (167)
T 4gkw_A 49 DQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQ 81 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 333333333334444444444444444444333
No 224
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=91.39 E-value=2.5 Score=41.99 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=5.9
Q ss_pred EECCEEEEE
Q 010847 141 LVGSRLIIF 149 (499)
Q Consensus 141 ~~~~~lyv~ 149 (499)
.++|++|.+
T Consensus 112 ~~dGk~Ygl 120 (471)
T 3mq9_A 112 RYNGKLIAY 120 (471)
T ss_dssp EETTEECEE
T ss_pred EECCEEEEE
Confidence 367777765
No 225
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=91.31 E-value=1.6 Score=32.55 Aligned_cols=53 Identities=15% Similarity=0.235 Sum_probs=29.5
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
++.-|+..+++.++.+.+..++.++...+++.++..+..++.++.+++.+|++
T Consensus 31 qVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 31 QVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666665555555555555555555555555555555433
No 226
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=91.10 E-value=3.3 Score=38.34 Aligned_cols=111 Identities=12% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE----CCEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
++++++.|+.+ ..+.+||+.++....+.+ +..-...-.++.+ ++.+++.|+.+ ..+.++|+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEEC
Confidence 35566677643 348888887765433321 1111111122333 25667777654 35888998
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEc-C--cEEEEEcCCCCCCCCCcEEEEECCCC-ceEe
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHA-N--RYLIVFGGCSHSIFFNDLHVLDLQTN-EWSQ 225 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~-~--~~l~v~GG~~~~~~~~~i~~~d~~~~-~W~~ 225 (499)
.+..|..+..... .......+.+. + +.+++.|+.+ ..+.++|+.+. .|..
T Consensus 89 ~~~~~~~~~~~~~---h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 89 ENGTWEKSHEHAG---HDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEV 142 (316)
T ss_dssp SSSCCCEEEEECC---CSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEE
T ss_pred CCCcceEEEEccC---CCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcce
Confidence 8877755443111 11122233332 2 4466666654 35777887665 4643
No 227
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.03 E-value=13 Score=36.65 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=76.1
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
++++|+|-|. ..|+||..+.......-. .+| . --++....+++|+|-|. ..+.||..+.+
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~-gi~--~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~~ 217 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWP-AVG--N-CTSALRWLGRYYCFQGN--------QFLRFNPVSGE 217 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCT-TSC--C-CSEEEEETTEEEEEETT--------EEEEECTTTCC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCC-CCC--c-cchheeeCCceEEEECC--------EEEEEcCccCc
Confidence 6788999873 389999998866543211 122 2 23455567899999763 46667665432
Q ss_pred ------------eEEeeecC------------C---CCCCC-ccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 172 ------------WDAVEVTQ------------T---PPAPR-YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 172 ------------W~~~~~~~------------~---~p~~r-~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
|-.++..| . .+.+. ..-+++...++.+|+|-|. ..|++|.....+
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~-------~yWR~~~~~~~~ 290 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS-------HYWRLDTNRDGW 290 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT-------EEEECTTGGGCC
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC-------EEEEEecCCCCc
Confidence 21111000 0 01111 1223333245668998873 466666543332
Q ss_pred EecccCC---CCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 224 SQPEIKG---DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 224 ~~~~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
....+.. .+|.. --++...++.+|+|=| +.+|+|+...
T Consensus 291 ~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~ 331 (460)
T 1qhu_A 291 HSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKG 331 (460)
T ss_dssp CCEEGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSB
T ss_pred CccchhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCC
Confidence 2211111 12322 3345556789999966 2688888653
No 228
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.95 E-value=9.8 Score=35.21 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=53.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE---ECCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL---VGSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
++..++.|+.+ ..+.+||+.++...... ....+ -.++.. .++.+++.|+.+ ..+.+||+.
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~---~~~~~--v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~ 159 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIA---QHDAP--VKTIHWIKAPNYSCVMTGSWD------KTLKFWDTR 159 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEE---ECSSC--EEEEEEEECSSCEEEEEEETT------SEEEEECSS
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeec---cccCc--eEEEEEEeCCCCCEEEEccCC------CcEEEEECC
Confidence 45566666543 34999999988765543 11111 122222 245777777754 358899987
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
+.+-...-. . +....++. .....+++.++ + +.+.+||+....
T Consensus 160 ~~~~~~~~~---~--~~~~~~~~-~~~~~~~~~~~-~-----~~i~~~~~~~~~ 201 (368)
T 3mmy_A 160 SSNPMMVLQ---L--PERCYCAD-VIYPMAVVATA-E-----RGLIVYQLENQP 201 (368)
T ss_dssp CSSCSEEEE---C--SSCEEEEE-EETTEEEEEEG-G-----GCEEEEECSSSC
T ss_pred CCcEEEEEe---c--CCCceEEE-ecCCeeEEEeC-C-----CcEEEEEecccc
Confidence 765322211 1 11222222 23443444333 2 358888886653
No 229
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=90.89 E-value=1.1 Score=32.73 Aligned_cols=31 Identities=10% Similarity=0.213 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhhhHHHHHhhhhhHHHHHHhh
Q 010847 385 AIKEDKRVLELSLTEVRTENSRFREKIDEVN 415 (499)
Q Consensus 385 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 415 (499)
.|+......++.+.....++.+|++++...+
T Consensus 6 ~L~~~L~~aEeaL~~kq~~id~lke~~~q~~ 36 (94)
T 3jsv_C 6 DLRQQLQQAEEALVAKQELIDKLKEEAEQHK 36 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3444444444445444445555555444443
No 230
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=90.89 E-value=3.9 Score=31.23 Aligned_cols=24 Identities=29% Similarity=0.158 Sum_probs=11.8
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHH
Q 010847 429 QGQLVAERSRCFKLEAQIAELQKM 452 (499)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~e~~~~ 452 (499)
..+.+.+.++.+.-|+.+.++++.
T Consensus 44 k~qV~~L~~~~q~sE~~L~~Lqq~ 67 (112)
T 1x79_B 44 SHQISALVLRAQASEILLEELQQG 67 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555555555555444
No 231
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.68 E-value=11 Score=35.43 Aligned_cols=151 Identities=9% Similarity=-0.016 Sum_probs=74.4
Q ss_pred cCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEc-Cc-EEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcC
Q 010847 159 LNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHA-NR-YLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGR 236 (499)
Q Consensus 159 ~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~-~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r 236 (499)
...++.+|+.+.+...+... ........... ++ .|++............|+.+|+.+..+..+.. ..+.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE----HAEG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC----CCTT
T ss_pred cceEEEEECCCCcEEeeccC-----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec----cCCC
Confidence 45789999998887666531 11122222333 33 34444321111223579999998887776532 1111
Q ss_pred cccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEE-cCceEEEEEcCC----
Q 010847 237 AGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAII-EGEHHLVAFGGY---- 309 (499)
Q Consensus 237 ~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~-~~~~~l~v~GG~---- 309 (499)
.......+ +++.+++...........++++|+.++....+...+. .. ..... ++. +++..++.
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--------~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--------CS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--------EE-EEEECSSSS-EEEEEECCC---
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--------CC-CCccCCCCc-eEEEecCCccee
Confidence 11111222 3443333332222212349999999888776654321 12 22233 443 44432221
Q ss_pred -------CCCCCceEEEEECCCCCCC
Q 010847 310 -------NGKYNNEVFVMRLKPRDIP 328 (499)
Q Consensus 310 -------~~~~~~~~~~~~~~~~~W~ 328 (499)
.......++++|+......
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCC
T ss_pred eccccccccCCCCcEEEEecccCceE
Confidence 1123468999998766543
No 232
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.68 E-value=4.1 Score=37.42 Aligned_cols=92 Identities=18% Similarity=0.133 Sum_probs=47.7
Q ss_pred cEEEEECCCCeeEEeeecCCCCCCCccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCccc
Q 010847 161 DVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH 239 (499)
Q Consensus 161 ~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~ 239 (499)
.++.+|+.+.+-..+... +....-..++...+ +++|+. .+.+++||+.+.+-...-..+ ....
T Consensus 220 ~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~-----~~~~ 283 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVR---IMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASIKRVPLP-----HSYY 283 (337)
T ss_dssp EEEEEETTTCCEEEEEEE---ECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEEEEEECS-----SCCC
T ss_pred ceEEEeCCCCCceEeecC---CCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCcceecCC-----Ccee
Confidence 689999988875533321 11111222333334 445544 157999999887643321111 1122
Q ss_pred EEEEE-CCE-EEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 240 AGITI-DEN-WYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 240 ~~~~~-~~~-l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
+++.. +++ +|+ ++. .+.+.+||+.+..-.
T Consensus 284 ~~~~s~dg~~l~~-~~~-----~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 284 SVNVSTDGSTVWL-GGA-----LGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEECTTSCEEEE-ESB-----SSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEE-EcC-----CCcEEEEECcCCcEE
Confidence 33333 334 555 432 246899999877543
No 233
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=90.63 E-value=0.92 Score=35.43 Aligned_cols=7 Identities=14% Similarity=0.472 Sum_probs=2.9
Q ss_pred HHHHHHH
Q 010847 383 IDAIKED 389 (499)
Q Consensus 383 ~~~l~~~ 389 (499)
|+.|+.+
T Consensus 17 Ie~Lkre 23 (120)
T 3i00_A 17 IERLYRE 23 (120)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 234
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.60 E-value=11 Score=35.09 Aligned_cols=191 Identities=13% Similarity=0.059 Sum_probs=92.8
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.+++.||.++ .+.+||+.++.-...-..... . .....+. ..++..++.|.++-. ...
T Consensus 49 ~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v-----~----~~~~~~~--~~s~s~D~~i~~w~~-------~~~ 105 (343)
T 3lrv_A 49 WVCMCRCEDG-----ALHFTQLKDSKTITTITTPNP-----R----TGGEHPA--IISRGPCNRLLLLYP-------GNQ 105 (343)
T ss_dssp EEEEEEEETT-----EEEEEEESSSSCEEEEEEECC-----C----TTCCCCS--EEEECSTTEEEEEET-------TTE
T ss_pred CEEEEECCCC-----cEEEEECCCCcEEEEEecCCc-----e----eeeeCCc--eEEecCCCeEEEEEc-------cCc
Confidence 6777777533 478888887754322111100 0 0001111 222223456666643 224
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEE----CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 111 VRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
+..||..+..-..... .+... ...++.+ ++.+++.|+.+ ..+.+||+.+.+-..... ......
T Consensus 106 ~~~~~~~~~~~~~~~~---~~~~~-~v~~~~~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~---~~~~~~ 172 (343)
T 3lrv_A 106 ITILDSKTNKVLREIE---VDSAN-EIIYMYGHNEVNTEYFIWADNR------GTIGFQSYEDDSQYIVHS---AKSDVE 172 (343)
T ss_dssp EEEEETTTCCEEEEEE---CCCSS-CEEEEECCC---CCEEEEEETT------CCEEEEESSSSCEEEEEC---CCSSCC
T ss_pred eEEeecCCcceeEEee---cCCCC-CEEEEEcCCCCCCCEEEEEeCC------CcEEEEECCCCcEEEEEe---cCCCCc
Confidence 7777877776322221 11111 1112222 45567767754 358999998877643331 111212
Q ss_pred cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE--ecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceE
Q 010847 187 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS--QPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQET 263 (499)
Q Consensus 187 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~--~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~ 263 (499)
-.+++...++.+++.|+.+ ..|.+||+.+..-. .+. . .....-.+++.. ++..++.|+ ++ .+
T Consensus 173 i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~--~--~h~~~v~~l~fs~~g~~l~s~~-~~-----~v 237 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQASSRFP--V--DEEAKIKEVKFADNGYWMVVEC-DQ-----TV 237 (343)
T ss_dssp CCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCCEECC--C--CTTSCEEEEEECTTSSEEEEEE-SS-----BE
T ss_pred eEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCccEEe--c--cCCCCEEEEEEeCCCCEEEEEe-CC-----eE
Confidence 2333444466677777754 36999999876533 221 1 011111122222 345666665 22 57
Q ss_pred EEEECCCCc
Q 010847 264 IVLNMTKLA 272 (499)
Q Consensus 264 ~~~d~~~~~ 272 (499)
.+||+.+..
T Consensus 238 ~iwd~~~~~ 246 (343)
T 3lrv_A 238 VCFDLRKDV 246 (343)
T ss_dssp EEEETTSST
T ss_pred EEEEcCCCC
Confidence 888987653
No 235
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=90.59 E-value=1.8 Score=44.25 Aligned_cols=13 Identities=8% Similarity=0.202 Sum_probs=6.2
Q ss_pred HHHHHHHHhhccc
Q 010847 472 AFEQEMERATSVQ 484 (499)
Q Consensus 472 ~~~~~~~~~~~~q 484 (499)
.+..|.++++.+.
T Consensus 571 ~~~~ei~~l~~~~ 583 (592)
T 1f5n_A 571 IMKNEIQDLQTKM 583 (592)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 4455555444443
No 236
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=90.58 E-value=2.2 Score=31.27 Aligned_cols=25 Identities=4% Similarity=0.219 Sum_probs=10.3
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHH
Q 010847 406 RFREKIDEVNSTHSELSKELSSVQG 430 (499)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~ 430 (499)
.|...+...++-+......+.++++
T Consensus 6 ~L~~~L~~aEeaL~~kq~~id~lke 30 (94)
T 3jsv_C 6 DLRQQLQQAEEALVAKQELIDKLKE 30 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3444444444444444333333333
No 237
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.48 E-value=12 Score=35.31 Aligned_cols=187 Identities=12% Similarity=0.075 Sum_probs=94.3
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~ 108 (499)
.+++.|+.+ ..+.+||+.++.......... ....-.+++.. ++.+++.|+.+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~~l~s~~~d------ 140 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMG---------------PGDAITGMKFNQFNTNQLFVSSIR------ 140 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCS---------------TTCBEEEEEEETTEEEEEEEEETT------
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCC---------------cCCceeEEEeCCCCCCEEEEEeCC------
Confidence 455666542 358899999887765543211 01111223333 34666666643
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
..+.++|+.+.....+... ......-.+++. -++.+++.|+.+ ..+.+||+....-..+.. ....
T Consensus 141 ~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~------h~~~ 206 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKT--DSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKL------HKAK 206 (383)
T ss_dssp TEEEEEETTSCEEEEEECC--CCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEEC------SSSC
T ss_pred CEEEEEECCCCceEEEecc--CCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEecc------CCCc
Confidence 3488999988766666421 111111122222 245666666643 368999985544433331 1122
Q ss_pred ceEEEE-cCcE-EEEEcCCCCCCCCCcEEEEECCCC----ceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCC
Q 010847 188 HSAALH-ANRY-LIVFGGCSHSIFFNDLHVLDLQTN----EWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNG 259 (499)
Q Consensus 188 ~~~~~~-~~~~-l~v~GG~~~~~~~~~i~~~d~~~~----~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~ 259 (499)
...+.+ .++. +++.|+.+ ..+.+||+.+. ...... .....-.+++.. ++.+++.|+.+
T Consensus 207 v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~l~~~~~d---- 272 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVD-----ATVKLWDLRNIKDKNSYIAEM-----PHEKPVNAAYFNPTDSTKLLTTDQR---- 272 (383)
T ss_dssp EEEEEECSSCTTEEEEEETT-----SEEEEEEGGGCCSTTCEEEEE-----ECSSCEEEEEECTTTSCEEEEEESS----
T ss_pred EEEEEECCCCCCEEEEEeCC-----CEEEEEeCCCCCcccceEEEe-----cCCCceEEEEEcCCCCCEEEEEcCC----
Confidence 223333 3333 66776654 36889998762 222210 111111122222 34666666643
Q ss_pred cceEEEEECCCCc
Q 010847 260 CQETIVLNMTKLA 272 (499)
Q Consensus 260 ~~~~~~~d~~~~~ 272 (499)
..+.+||+.+..
T Consensus 273 -~~i~iwd~~~~~ 284 (383)
T 3ei3_B 273 -NEIRVYSSYDWS 284 (383)
T ss_dssp -SEEEEEETTBTT
T ss_pred -CcEEEEECCCCc
Confidence 257888887643
No 238
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=90.44 E-value=5.2 Score=32.56 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=15.0
Q ss_pred ccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 010847 416 STHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKM 452 (499)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 452 (499)
.++.....++..+..++..++.+..+.+.....++++
T Consensus 51 ~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~E 87 (154)
T 2ocy_A 51 RELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKE 87 (154)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444433333333333333333
No 239
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.34 E-value=5.2 Score=36.48 Aligned_cols=107 Identities=12% Similarity=0.162 Sum_probs=53.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC----CEEEEEcCcCCCCCccCcEEEEEC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVG----SRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
+++.++.|+.++ .+.+||+.+.....+.+ +..-...-.++.+. +.+++.|+.+ ..+.++|+
T Consensus 20 ~g~~las~s~D~------~v~iw~~~~~~~~~~~~---l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK------TIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS------CEEEEEBCSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------TEEEEEEB
T ss_pred CCCEEEEEeCCC------EEEEEecCCCCcEEEEE---EccccCCeEEEEecCCCcCCEEEEEcCC------CEEEEEEc
Confidence 456667776543 38888876543322221 11101111223331 5677777654 35888999
Q ss_pred CCCeeEEeeecCCCCCCCccceEEEEc-C--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 168 ETMTWDAVEVTQTPPAPRYDHSAALHA-N--RYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 168 ~t~~W~~~~~~~~~p~~r~~~~~~~~~-~--~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
.+..|..+..... .......+.+. + +.+++.|+.+ ..+.+||+.+.
T Consensus 85 ~~~~~~~~~~~~~---h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~ 133 (297)
T 2pm7_B 85 ENGRWSQIAVHAV---HSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKEN 133 (297)
T ss_dssp SSSCBCCCEEECC---CSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSS
T ss_pred CCCceEEEEEeec---CCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCC
Confidence 8877754432111 11122233332 2 3356666654 35778887654
No 240
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=90.17 E-value=12 Score=35.04 Aligned_cols=135 Identities=12% Similarity=0.020 Sum_probs=69.0
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE----CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCC
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP 184 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~ 184 (499)
..+.++|+.++.-...-. + .. ....++.+ ++.+++.|+.+ ..+.++|+.+.+....-. + .
T Consensus 176 ~~v~lwd~~~~~~~~~~~-~-h~---~~v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~~~~~~~~~~~-~----h 239 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFH-G-HG---ADVLCLDLAPSETGNTFVSGGCD------KKAMVWDMRSGQCVQAFE-T----H 239 (354)
T ss_dssp SEEEEEETTTCCEEEEEE-C-CS---SCEEEEEECCCSSCCEEEEEETT------SCEEEEETTTCCEEEEEC-C----C
T ss_pred CcEEEEeCCCCeEEEEEc-C-CC---CCeEEEEEEeCCCCCEEEEEeCC------CeEEEEECCCCcEEEEec-C----C
Confidence 348888988876433221 1 11 11112222 34677777754 358999998876543321 1 1
Q ss_pred CccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcc
Q 010847 185 RYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQ 261 (499)
Q Consensus 185 r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~ 261 (499)
.....++.+ .++.+++.|+.+ ..+.+||+.+..-..+- . ..........+.+ ++.+++.|+.+.
T Consensus 240 ~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~--~-~~~~~~~~~~~~~s~~g~~l~~g~~d~----- 306 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIY--S-KESIIFGASSVDFSLSGRLLFAGYNDY----- 306 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE--C-CTTCCSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE--c-CCCcccceeEEEEeCCCCEEEEEECCC-----
Confidence 112223333 344467777754 35888998776432221 1 1111122223333 456666666432
Q ss_pred eEEEEECCCCc
Q 010847 262 ETIVLNMTKLA 272 (499)
Q Consensus 262 ~~~~~d~~~~~ 272 (499)
.+.+||+.+..
T Consensus 307 ~i~vwd~~~~~ 317 (354)
T 2pbi_B 307 TINVWDVLKGS 317 (354)
T ss_dssp CEEEEETTTCS
T ss_pred cEEEEECCCCc
Confidence 47888986654
No 241
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=90.05 E-value=1.7 Score=34.66 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=5.1
Q ss_pred HHHHHHHHHHhHH
Q 010847 459 IENEVQILRQQKS 471 (499)
Q Consensus 459 ~~~e~~~~~~~~~ 471 (499)
++.++.++.++.+
T Consensus 87 lE~eL~~~r~e~~ 99 (129)
T 3tnu_B 87 LEEALQKAKQDMA 99 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHH
Confidence 3344443333333
No 242
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.93 E-value=13 Score=35.07 Aligned_cols=119 Identities=11% Similarity=0.102 Sum_probs=58.7
Q ss_pred ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCC---
Q 010847 30 KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKK--- 104 (499)
Q Consensus 30 ~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~--- 104 (499)
..+|+.-...+...-+.+++||+.+++-...-+. .... .++.. +..+|+..-....
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~------------------g~~p-~i~~spdg~~lyv~~~~~~~~~~ 76 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT------------------AFNG-HVQVSNDGKKIYTMTTYHERITR 76 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC------------------CEEE-EEEECTTSSEEEEEEEEETTSSS
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecC------------------CCCC-ceEECCCCCEEEEEEeccccccc
Confidence 3678775422222235799999998875432211 1111 22222 5678887522111
Q ss_pred CCCCceEEEEECCCCcEE-EeecCCCCC-CCCcceEEEE--ECCEEEEEcCcCCCCCccCcEEEEECCCCee
Q 010847 105 SSDSMIVRFIDLETNLCG-VMETSGKVP-VARGGHSVTL--VGSRLIIFGGEDRSRKLLNDVHFLDLETMTW 172 (499)
Q Consensus 105 ~~~~~~~~~yd~~t~~W~-~~~~~g~~p-~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 172 (499)
....+.+.+||+.+.+-. .++..+... ....-+.++. -+..||+.... ..+.+.+||+.+++-
T Consensus 77 g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-----~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 77 GKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-----PATSIGIVDVAKGDY 143 (361)
T ss_dssp SCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-----SSEEEEEEETTTTEE
T ss_pred CCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-----CCCeEEEEECCCCcE
Confidence 111356999999886543 332110000 0111122222 24467776321 135789999988754
No 243
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=89.93 E-value=6 Score=32.17 Aligned_cols=13 Identities=8% Similarity=0.184 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHHH
Q 010847 422 SKELSSVQGQLVA 434 (499)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (499)
+++...+.++++.
T Consensus 78 E~~~~~ie~ElEe 90 (154)
T 2ocy_A 78 EEEADKLNKEVED 90 (154)
T ss_dssp HTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 244
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=89.91 E-value=2.9 Score=40.79 Aligned_cols=10 Identities=40% Similarity=0.368 Sum_probs=3.9
Q ss_pred hhhhhHHHHH
Q 010847 436 RSRCFKLEAQ 445 (499)
Q Consensus 436 ~~~~~~~~~~ 445 (499)
+++++.|+++
T Consensus 116 RRrIqyLKek 125 (562)
T 3ghg_A 116 RSRIEVLKRK 125 (562)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333434333
No 245
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=89.59 E-value=0.27 Score=50.21 Aligned_cols=9 Identities=0% Similarity=-0.064 Sum_probs=5.6
Q ss_pred eEEEEECCC
Q 010847 262 ETIVLNMTK 270 (499)
Q Consensus 262 ~~~~~d~~~ 270 (499)
-+.+|+..+
T Consensus 224 GI~v~~~~~ 232 (575)
T 2i1j_A 224 GLNIYEKDD 232 (575)
T ss_dssp EEEEEETTC
T ss_pred eeEEEeCCC
Confidence 366777654
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.55 E-value=12 Score=34.29 Aligned_cols=144 Identities=10% Similarity=0.029 Sum_probs=69.3
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCc----EEEeecCCCCCCCCcceEEEE-ECCE-EEEEcCcCCCCCccCcEEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNL----CGVMETSGKVPVARGGHSVTL-VGSR-LIIFGGEDRSRKLLNDVHFL 165 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~----W~~~~~~g~~p~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~v~~y 165 (499)
++.+++.|+.+ ..+.+||+.++. ..... ... ..-.+++. -++. +++.|+.+ ..+.+|
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~---~~~--~~v~~~~~~~~~~~~l~~~~~d------g~i~~w 84 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSL---RYK--HPLLCCNFIDNTDLQIYVGTVQ------GEILKV 84 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEE---ECS--SCEEEEEEEESSSEEEEEEETT------SCEEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeee---ecC--CceEEEEECCCCCcEEEEEcCC------CeEEEE
Confidence 34455566532 347888877665 32222 111 11122222 2566 66777643 368999
Q ss_pred EC-CCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc-------eEecccCCCCCCcCc
Q 010847 166 DL-ETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-------WSQPEIKGDLVTGRA 237 (499)
Q Consensus 166 d~-~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-------W~~~~~~~~~p~~r~ 237 (499)
|+ .+.....+.. . +....-.++....++ +++.|+.+ +.+.+||+.+.. ...+ .....+..
T Consensus 85 d~~~~~~~~~~~~--~-~~~~~v~~l~~~~~~-~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~ 152 (342)
T 1yfq_A 85 DLIGSPSFQALTN--N-EANLGICRICKYGDD-KLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNS---NNTKVKNK 152 (342)
T ss_dssp CSSSSSSEEECBS--C-CCCSCEEEEEEETTT-EEEEEETT-----SEEEEECHHHHTTBCEEEEESCS---SSSSSCCC
T ss_pred EeccCCceEeccc--c-CCCCceEEEEeCCCC-EEEEEcCC-----CeEEEEcccccccccccccCCee---eEEeeCCc
Confidence 99 8876644431 0 011111223333344 56666654 357888765400 1111 11112222
Q ss_pred ccEEEEECCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 238 GHAGITIDENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 238 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
-.+++...+. +++|+.+ ..+.+||+.+
T Consensus 153 v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp EEEEEECSSE-EEEEEST-----TEEEEEESSC
T ss_pred eEEEEecCCc-EEEEeCC-----CeEEEEECCc
Confidence 2233444555 5555433 2588899877
No 247
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.51 E-value=5.8 Score=37.77 Aligned_cols=133 Identities=16% Similarity=0.232 Sum_probs=78.9
Q ss_pred ccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcc--eEEEEECCEEEEEcCcC-------
Q 010847 83 MSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG--HSVTLVGSRLIIFGGED------- 153 (499)
Q Consensus 83 r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~--~~~~~~~~~lyv~GG~~------- 153 (499)
.+..|+-.+++.||+.--.......-+++.+.+..-..|+.+. .|..... .-.+.+++.||+||-.-
T Consensus 339 AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slr----fp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~ 414 (670)
T 3ju4_A 339 ASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLR----FPHNVHHTTLPFAKVGDDLIMFGSERAENEWEA 414 (670)
T ss_dssp EEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEE----CTTCCCSSCCCEEEETTEEEEEEECSSTTCSST
T ss_pred cccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhhee----ccccccccCCCcceeCCEEEEEecccccccccc
Confidence 3445666789999988544433333567888888889999995 4433333 23567899999998532
Q ss_pred ---CCCC--ccCcEE--EEEC-----CCCeeEEeee---cCCCCCCCccceEEEEcCcEE-EEEcCCCC-----------
Q 010847 154 ---RSRK--LLNDVH--FLDL-----ETMTWDAVEV---TQTPPAPRYDHSAALHANRYL-IVFGGCSH----------- 206 (499)
Q Consensus 154 ---~~~~--~~~~v~--~yd~-----~t~~W~~~~~---~~~~p~~r~~~~~~~~~~~~l-~v~GG~~~----------- 206 (499)
.++- .....+ ..++ ..-.|..+.. .|.......+...+++.|+.| |||||-+.
T Consensus 415 G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~ 494 (670)
T 3ju4_A 415 GAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSA 494 (670)
T ss_dssp TCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTT
T ss_pred CCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccc
Confidence 1110 011122 2233 3346766653 244444555556666767755 78998541
Q ss_pred ------CCCCCcEEEEECC
Q 010847 207 ------SIFFNDLHVLDLQ 219 (499)
Q Consensus 207 ------~~~~~~i~~~d~~ 219 (499)
.....++|+|.+.
T Consensus 495 k~~~~~~Ghp~dlY~~ri~ 513 (670)
T 3ju4_A 495 KDPFKSDGHPSDLYCYKMK 513 (670)
T ss_dssp CCTTSTTCCCCEEEEEEEE
T ss_pred cCccccCCCCcceEEEEEE
Confidence 1235578888653
No 248
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=89.43 E-value=0.82 Score=33.53 Aligned_cols=49 Identities=6% Similarity=0.139 Sum_probs=26.5
Q ss_pred hhhhhHHHHHHhhccch-HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 010847 403 ENSRFREKIDEVNSTHS-ELSKELSSVQGQLVAERSRCFKLEAQIAELQK 451 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 451 (499)
+...+..+....+.+.. +.+.++.+.-++++..+..+.+||.....+++
T Consensus 22 Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq 71 (92)
T 3vp9_A 22 EFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTHRKMKD 71 (92)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334344444443342 56666666666677667766666666544433
No 249
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=89.36 E-value=1.3 Score=44.27 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=9.0
Q ss_pred hhhHHHHHHhhccchHHHHHHH
Q 010847 405 SRFREKIDEVNSTHSELSKELS 426 (499)
Q Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~ 426 (499)
.++++.+...++..++.+++++
T Consensus 370 ~~le~~~~~~~~~~~~~~~~~~ 391 (487)
T 3oja_A 370 KALDEQVSNGRRAHAELDGTLQ 391 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhhHH
Confidence 3344444444444444443333
No 250
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.31 E-value=9.9 Score=35.01 Aligned_cols=205 Identities=11% Similarity=0.032 Sum_probs=100.3
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCc
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSM 109 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~ 109 (499)
.||+.+... ..+++||+.++....+.... ...-++++.. ++++|+.+..... ...
T Consensus 57 ~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-----------------~~~~~~i~~~~dg~l~v~~~~~~~--~~~ 112 (333)
T 2dg1_A 57 QLFLLDVFE-----GNIFKINPETKEIKRPFVSH-----------------KANPAAIKIHKDGRLFVCYLGDFK--STG 112 (333)
T ss_dssp CEEEEETTT-----CEEEEECTTTCCEEEEEECS-----------------SSSEEEEEECTTSCEEEEECTTSS--SCC
T ss_pred CEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-----------------CCCcceEEECCCCcEEEEeCCCCC--CCc
Confidence 677765532 35899999999887654321 1112233332 5678876532211 124
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDH 188 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 188 (499)
.+++||+.++....+.. .......-..++. -++++|+.............+++||+.+.+...+..... ...
T Consensus 113 ~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~ 185 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS-----VAN 185 (333)
T ss_dssp EEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES-----SEE
T ss_pred eEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC-----ccc
Confidence 59999999887664431 1111111122222 256787754322111124578999988776665532101 112
Q ss_pred eEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCCC--ceEeccc--CCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcce
Q 010847 189 SAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTN--EWSQPEI--KGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 189 ~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~--~W~~~~~--~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~ 262 (499)
.++...+ +.+|+.... .+.+++||+.+. ....+.. ....+....-..++.. ++.+||.... ...
T Consensus 186 ~i~~~~dg~~l~v~~~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~ 255 (333)
T 2dg1_A 186 GIALSTDEKVLWVTETT-----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGR 255 (333)
T ss_dssp EEEECTTSSEEEEEEGG-----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTE
T ss_pred ceEECCCCCEEEEEeCC-----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCE
Confidence 2333334 357765422 246899998542 2322110 0001111111122222 4567776432 135
Q ss_pred EEEEECCCCceEEe
Q 010847 263 TIVLNMTKLAWSIL 276 (499)
Q Consensus 263 ~~~~d~~~~~W~~l 276 (499)
+.+||+....-..+
T Consensus 256 v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 256 VLVFNKRGYPIGQI 269 (333)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 88899865443333
No 251
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=89.16 E-value=3.7 Score=37.06 Aligned_cols=78 Identities=21% Similarity=0.284 Sum_probs=42.9
Q ss_pred HHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHH
Q 010847 399 EVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRC----FKLEAQIAELQKMLESSQTIENEVQILRQQKSAFE 474 (499)
Q Consensus 399 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~ 474 (499)
..+++.++|+.+++++....-.|.+- +..+..+++.+ .+-+.-...+++.|.+..++..+..++.+++++++
T Consensus 21 ~lr~~~eql~~~i~~L~~~ap~W~~a----q~al~rL~eq~g~~~~ds~~v~~~mq~~Le~Ere~~~~Rd~~a~~k~~Le 96 (302)
T 3ibp_A 21 ALRQEQEQLQSRIQSLMQRAPVWLAA----QNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVD 96 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHH----HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666655555555332 33344443332 22223335566666666666666667777777777
Q ss_pred HHHHHh
Q 010847 475 QEMERA 480 (499)
Q Consensus 475 ~~~~~~ 480 (499)
++.+++
T Consensus 97 ~~ierL 102 (302)
T 3ibp_A 97 EEIERL 102 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 252
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=89.15 E-value=1.5 Score=34.99 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=13.9
Q ss_pred hccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 010847 415 NSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQ 450 (499)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 450 (499)
+.++.+..+.++.++-+++.++.....|+..+.+.+
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e 72 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETK 72 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 333444444444444444444444444444444333
No 253
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.92 E-value=10 Score=32.44 Aligned_cols=149 Identities=12% Similarity=0.088 Sum_probs=81.9
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCC--CcEEEeecC---CCCCCCCcceEEEEE--CCEEEEEcCcCCCCCcc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET--NLCGVMETS---GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLL 159 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~---g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~ 159 (499)
+++.+++++|+|=|. -+|+++... ........+ ..+|.. .. ++... ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------- 72 (195)
T ss_dssp EEEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET--------
T ss_pred EEEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC--------
Confidence 455679999999763 288887755 233332221 124432 22 22222 578999966
Q ss_pred CcEEEEECCCCeeEEeeecC--CCCCC--CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-----cccCC
Q 010847 160 NDVHFLDLETMTWDAVEVTQ--TPPAP--RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIKG 230 (499)
Q Consensus 160 ~~v~~yd~~t~~W~~~~~~~--~~p~~--r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~~ 230 (499)
+..|.|+..+. ..+.... .+|.. .-..+.. ..++.+|+|-| +..|+||..+.+-.. +. .
T Consensus 73 ~~yw~~~~~~~--~~Pk~i~~~G~p~~~~~iDAA~~-~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~--~ 140 (195)
T 1itv_A 73 RQVWVYTGASV--LGPRRLDKLGLGADVAQVTGALR-SGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVD--R 140 (195)
T ss_dssp TEEEEEETTEE--EEEEEGGGGTCCTTCCCCCEEEE-CSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHH--H
T ss_pred CEEEEEcCCcc--CCCEEeeecccCCCccceeEEEE-cCCCeEEEEeC-------CEEEEEeCCcccccCCCccChh--h
Confidence 35788875432 1122211 13321 2222222 34678999977 468999987654221 11 0
Q ss_pred CCC-CcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 231 DLV-TGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 231 ~~p-~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
.++ .|..-.++...++.+|+|-|. ..|.||..+..
T Consensus 141 ~w~Gvp~~idaa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 141 MFPGVPLDTHDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp HSTTSCSSCSEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred cCCCCCCCCCEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 111 122234555667899999772 58899987664
No 254
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=88.83 E-value=5.9 Score=38.75 Aligned_cols=11 Identities=9% Similarity=0.262 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q 010847 383 IDAIKEDKRVL 393 (499)
Q Consensus 383 ~~~l~~~~~~~ 393 (499)
++.|+....++
T Consensus 102 LqeLe~~l~~l 112 (464)
T 1m1j_B 102 LRDLKDRVAKF 112 (464)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444433333
No 255
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=88.78 E-value=2.2 Score=35.84 Aligned_cols=10 Identities=30% Similarity=0.072 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 010847 425 LSSVQGQLVA 434 (499)
Q Consensus 425 ~~~~~~~~~~ 434 (499)
+...+.+++.
T Consensus 94 l~akr~EL~a 103 (175)
T 3lay_A 94 LISKRYEYNA 103 (175)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 256
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=88.75 E-value=2.1 Score=30.44 Aligned_cols=26 Identities=19% Similarity=0.482 Sum_probs=11.3
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHH
Q 010847 409 EKIDEVNSTHSELSKELSSVQGQLVA 434 (499)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (499)
++++..+..+.++++.++..+++++.
T Consensus 13 ~klq~~E~rN~~Le~~v~~le~~Le~ 38 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQLRAMERSLEE 38 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443
No 257
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=88.73 E-value=4.6 Score=37.74 Aligned_cols=14 Identities=7% Similarity=0.237 Sum_probs=6.7
Q ss_pred hhHHHHHHHHHHHH
Q 010847 381 TDIDAIKEDKRVLE 394 (499)
Q Consensus 381 ~~~~~l~~~~~~~~ 394 (499)
.+|+.|+.+...+.
T Consensus 67 ~rIe~L~~~L~~~s 80 (390)
T 1deq_A 67 SRINKLRDSLFNYQ 80 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 33555555544443
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=88.66 E-value=15 Score=33.94 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=68.2
Q ss_pred ceEEEEECCCCcE-EEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCC--c-cCcEEEEECCCCeeEEeeecCCCCCC
Q 010847 109 MIVRFIDLETNLC-GVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRK--L-LNDVHFLDLETMTWDAVEVTQTPPAP 184 (499)
Q Consensus 109 ~~~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~--~-~~~v~~yd~~t~~W~~~~~~~~~p~~ 184 (499)
..++++|+.++.. ..+. . + ....++...+.+++.+....... . ...++.+| +..+..+...
T Consensus 152 ~~l~~~d~~~~~~~~~l~---~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~------ 216 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFE---K-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK------ 216 (347)
T ss_dssp EEEEEEETTTTEEEEEEE---E-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE------
T ss_pred ceEEEEECCCCeEEeeec---C-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC------
Confidence 5699999999887 6664 2 2 22233333333555553332111 2 45788888 7777766531
Q ss_pred CccceEEEEcCcEEEEEcCCCC--CCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcce
Q 010847 185 RYDHSAALHANRYLIVFGGCSH--SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQE 262 (499)
Q Consensus 185 r~~~~~~~~~~~~l~v~GG~~~--~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 262 (499)
.......-+++.|++.+.... ......++.+| ++.+..+.. ... ..........+.+|+.+..+. ...
T Consensus 217 -~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~--~~~--~~~~~~~~~sdg~~~~~~~~~---~~~ 286 (347)
T 2gop_A 217 -VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD--EVD--RGVGQAKIKDGKVYFTLFEEG---SVN 286 (347)
T ss_dssp -ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST--TCC--SEEEEEEEETTEEEEEEEETT---EEE
T ss_pred -cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc--cCC--cccCCccEEcCcEEEEEecCC---cEE
Confidence 111222333444444432221 12345799998 666666521 111 111111222244555554332 346
Q ss_pred EEEEECCCCceEEe
Q 010847 263 TIVLNMTKLAWSIL 276 (499)
Q Consensus 263 ~~~~d~~~~~W~~l 276 (499)
+| ++ ++....+
T Consensus 287 l~-~~--~g~~~~~ 297 (347)
T 2gop_A 287 LY-IW--DGEIKPI 297 (347)
T ss_dssp EE-EE--SSSEEEE
T ss_pred EE-Ec--CCceEEE
Confidence 77 77 3444444
No 259
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.61 E-value=13 Score=33.27 Aligned_cols=195 Identities=9% Similarity=0.028 Sum_probs=94.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcc-eEEEEE--CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGG-HSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
++.||+.+.. ...+.+||+.......+...+..+..... ..++.. ++.||+.+... .+.+.+||..
T Consensus 40 ~g~l~v~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~~ 108 (286)
T 1q7f_A 40 QNDIIVADTN------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQY 108 (286)
T ss_dssp TCCEEEEEGG------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECTT
T ss_pred CCCEEEEECC------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECCC
Confidence 4678887543 23499999885544444322211111122 233332 56898876421 3468899954
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
...-..+.. +....-+.++...++.+|+.... .+.+++||+.......+....... .-.+++.. ++.
T Consensus 109 g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~---~p~~i~~~~~g~ 176 (286)
T 1q7f_A 109 GQFVRKFGA----TILQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLE---FPNGVVVNDKQE 176 (286)
T ss_dssp SCEEEEECT----TTCSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCS---SEEEEEECSSSE
T ss_pred CcEEEEecC----ccCCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccC---CcEEEEECCCCC
Confidence 433333321 11111233334345667776532 246899997655444332111111 11223333 467
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+||.... .+.+.+||+.......+..... . .....+.++.+..||+....++ ..+.+|+...
T Consensus 177 l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~------~-~~p~~i~~d~~G~l~v~~~~~~---~~i~~~~~~g 238 (286)
T 1q7f_A 177 IFISDNR-----AHCVKVFNYEGQYLRQIGGEGI------T-NYPIGVGINSNGEILIADNHNN---FNLTIFTQDG 238 (286)
T ss_dssp EEEEEGG-----GTEEEEEETTCCEEEEESCTTT------S-CSEEEEEECTTCCEEEEECSSS---CEEEEECTTS
T ss_pred EEEEECC-----CCEEEEEcCCCCEEEEEccCCc------c-CCCcEEEECCCCCEEEEeCCCC---EEEEEECCCC
Confidence 8877542 2368899986654444432110 0 1122334444345666553321 1677887643
No 260
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=88.54 E-value=26 Score=36.53 Aligned_cols=148 Identities=13% Similarity=0.044 Sum_probs=80.6
Q ss_pred ceEEEEECCCC--cEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCC---eeEEeeecCCCCC
Q 010847 109 MIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM---TWDAVEVTQTPPA 183 (499)
Q Consensus 109 ~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~p~ 183 (499)
+.++.+|+.+. .|..+.. +.....+.....++.||+....+.. ...++.+|+.+. .|+.+.+... .
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~----~~~~~~~~~~~~g~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~--~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG----DLDADVSLVDNKGSTLYLLTNRDAP---NRRLVTVDAANPGPAHWRDLIPERQ--Q 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC----SSSSCEEEEEEETTEEEEEECTTCT---TCEEEEEETTSCCGGGCEEEECCCS--S
T ss_pred cEEEEEECCCCCCceEEEeC----CCCceEEEEeccCCEEEEEECCCCC---CCEEEEEeCCCCCccccEEEecCCC--C
Confidence 57999998776 6777752 2122222244567899998765432 347999998763 4887764211 1
Q ss_pred CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE---CCEEEEEeCCCCCCCc
Q 010847 184 PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI---DENWYIVGGGDNNNGC 260 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~ 260 (499)
. .. ....+++|++..-.++ ...++++|+.+.....+. .|..... ..... ++.+++... +....
T Consensus 330 ~---~~-~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~----~p~~~~~-~~~~~~~d~~~l~~~~s--s~~tP 395 (693)
T 3iuj_A 330 V---LT-VHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA----LPGLGSV-SGFNGKHDDPALYFGFE--NYAQP 395 (693)
T ss_dssp C---EE-EEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC----CSSSSEE-EECCCCTTCSCEEEEEE--CSSSC
T ss_pred E---EE-EEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee----cCCCceE-EeeecCCCCCEEEEEec--CCCCC
Confidence 1 12 3333555555432221 246899998866555542 2221111 11111 233443322 11223
Q ss_pred ceEEEEECCCCceEEeccC
Q 010847 261 QETIVLNMTKLAWSILTSV 279 (499)
Q Consensus 261 ~~~~~~d~~~~~W~~l~~~ 279 (499)
..++.||+.++..+.+...
T Consensus 396 ~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 396 PTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CEEEEECTTTCCEEEEECC
T ss_pred CEEEEEECCCCeEEEEEeC
Confidence 5789999988888776543
No 261
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=88.25 E-value=15 Score=33.44 Aligned_cols=63 Identities=11% Similarity=0.080 Sum_probs=33.0
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCC-------cEEEeecCCCCCCCCcceEEEEE--C--CEEEEEcCcCCCCCccCc
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETN-------LCGVMETSGKVPVARGGHSVTLV--G--SRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~-------~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~ 161 (499)
+.+++.|+.++ .+.+||+.++ .|..+... .........+.+ + +.+++.|+.+ ..
T Consensus 71 ~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~ 135 (351)
T 3f3f_A 71 GRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGND------GI 135 (351)
T ss_dssp CSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------CE
T ss_pred CCEEEEEcCCC------eEEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCC------Cc
Confidence 56777777543 3777887664 34444321 111112222223 2 5566666643 35
Q ss_pred EEEEECCCC
Q 010847 162 VHFLDLETM 170 (499)
Q Consensus 162 v~~yd~~t~ 170 (499)
+.+||+.+.
T Consensus 136 v~iwd~~~~ 144 (351)
T 3f3f_A 136 LRLYDALEP 144 (351)
T ss_dssp EEEEECSST
T ss_pred EEEecCCCh
Confidence 888887654
No 262
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=88.20 E-value=18 Score=34.40 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=58.5
Q ss_pred ceEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCc-cceeEEEECCEEEEEcccCCC---C
Q 010847 30 KKLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPM-SDHCMVKWGTKLLILGGHYKK---S 105 (499)
Q Consensus 30 ~~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r-~~~s~~~~~~~iyv~GG~~~~---~ 105 (499)
..+|+.-+...+ ....+.+||+.+++-. ...+ ... .+..+...+..+|+..-.... .
T Consensus 33 ~~~yv~~~~~~~-~~~~v~v~D~~t~~~~--~~i~----------------~g~~p~i~~spDg~~lyv~n~~~~~~~rg 93 (373)
T 2mad_H 33 RRSYINLPAHHS-AIIQQWVLDAGSGSIL--GHVN----------------GGFLPNPVAAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred CEEEEeCCcccC-CccEEEEEECCCCeEE--EEec----------------CCCCCCeEECCCCCEEEEEeccccccccC
Confidence 368887541111 1117899999987743 2221 111 133333446678887532111 1
Q ss_pred CCCceEEEEECCCCcEEE-eecCCCC-----CCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeE
Q 010847 106 SDSMIVRFIDLETNLCGV-METSGKV-----PVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWD 173 (499)
Q Consensus 106 ~~~~~~~~yd~~t~~W~~-~~~~g~~-----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 173 (499)
...+.+.+||+.+.+-.. ++..+.. ..|+ +....-.+..||+..-. ..+.+.++| .+++-.
T Consensus 94 ~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~~-----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 94 KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNADLLFFQFA-----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCCEEEEEecC-----CCCeEEEEE-CCCCEE
Confidence 124568899998765432 2211000 1111 11111234567776321 135799999 887653
No 263
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=88.00 E-value=15 Score=33.18 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=68.5
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
+.|.++|+.+++....-.... ......++.+ +++.++.|+.+ ..+.++|..+++-.
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~----------------~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ----------------PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS----------------TTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecC----------------CCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 358999999988765543221 1111223333 45677777753 34888999988654
Q ss_pred EeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEc
Q 010847 123 VMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFG 202 (499)
Q Consensus 123 ~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~G 202 (499)
.... ... ....+....+.+++.|+.+ ..+..++..+.........+. ...........++.+++.|
T Consensus 103 ~~~~---~h~--~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~ 168 (318)
T 4ggc_A 103 RNMT---SHS--ARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGH---SQEVCGLRWAPDGRHLASG 168 (318)
T ss_dssp EEEE---CCS--SCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEE
T ss_pred EEec---Ccc--ceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCc---cCceEEEEEcCCCCEEEEE
Confidence 3321 111 1222334445555655543 235555555443322221111 1111122222344456666
Q ss_pred CCCCCCCCCcEEEEECCCCc
Q 010847 203 GCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 203 G~~~~~~~~~i~~~d~~~~~ 222 (499)
+.+ ..+.+||+.+..
T Consensus 169 ~~d-----~~i~iwd~~~~~ 183 (318)
T 4ggc_A 169 GND-----NLVNVWPSAPGE 183 (318)
T ss_dssp ETT-----SCEEEEESSCBT
T ss_pred ecC-----cceeEEECCCCc
Confidence 654 358888887654
No 264
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=87.75 E-value=8.6 Score=30.96 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=12.2
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLV 433 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (499)
...++.++..++..+.++.+.++.++.++.
T Consensus 77 l~~l~~ki~dLeeel~eK~K~~e~l~DEl~ 106 (152)
T 3a7p_A 77 LKSKEQEIRRLKEVIALKNKNTERLNAALI 106 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444444333
No 265
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=87.61 E-value=11 Score=36.60 Aligned_cols=23 Identities=0% Similarity=0.167 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHh
Q 010847 458 TIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
+-+.++.++++.+.+...++.++
T Consensus 84 eY~~kl~aYe~~~~~~~k~lae~ 106 (497)
T 3iox_A 84 DYPVKLKAYEDEQTSIKAALAEL 106 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666665555555543
No 266
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=87.38 E-value=9 Score=31.05 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=29.9
Q ss_pred HHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHH
Q 010847 412 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQT 458 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~ 458 (499)
+.......+..+.+..+...++...+|....+.++.+++.+|+.+..
T Consensus 69 eeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~ 115 (147)
T 2b9c_A 69 EDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTN 115 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555555566667777777777777777777777766653
No 267
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.04 E-value=22 Score=33.98 Aligned_cols=123 Identities=12% Similarity=0.113 Sum_probs=67.1
Q ss_pred CCCCCCccceeEEEECCEEEEEcccCCCCCCCc-eEEEEE----CCCCcE-EEeecCCCCCCCCcceEEEEECCEEEEEc
Q 010847 77 LEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSM-IVRFID----LETNLC-GVMETSGKVPVARGGHSVTLVGSRLIIFG 150 (499)
Q Consensus 77 ~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~-~~~~yd----~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~lyv~G 150 (499)
+..|....-|+.+.+++.-|.+|=.++.-.... -+..|. .....- +.++. ..-......|+-.+++.||+.-
T Consensus 278 ~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s--ey~~~AsEPCvkyYdgvLyLtT 355 (670)
T 3ju4_A 278 GLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS--EYEPDASEPCIKYYDGVLYLIT 355 (670)
T ss_dssp CSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG--GGCTTEEEEEEEEETTEEEEEE
T ss_pred ccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechh--hhccccccchhhhhCCEEEEEe
Confidence 344566788999999999999986555433111 122221 111111 22221 1122223345556799999985
Q ss_pred CcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCC
Q 010847 151 GEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGC 204 (499)
Q Consensus 151 G~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~ 204 (499)
-.......-+.+++-+.....|+.+.... .......-.+.++| .|||||--
T Consensus 356 Rgt~~~~~GS~L~rs~d~Gq~w~slrfp~--nvHhtnlPFakvgD-~l~mFgsE 406 (670)
T 3ju4_A 356 RGTRGDRLGSSLHRSRDIGQTWESLRFPH--NVHHTTLPFAKVGD-DLIMFGSE 406 (670)
T ss_dssp EESCTTSCCCEEEEESSTTSSCEEEECTT--CCCSSCCCEEEETT-EEEEEEEC
T ss_pred cCcCCCCCcceeeeecccCCchhheeccc--cccccCCCcceeCC-EEEEEecc
Confidence 33333223456777777778899997521 11112222455644 59999863
No 268
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=86.97 E-value=6.3 Score=27.80 Aligned_cols=8 Identities=25% Similarity=0.302 Sum_probs=2.9
Q ss_pred HHHHHhHH
Q 010847 464 QILRQQKS 471 (499)
Q Consensus 464 ~~~~~~~~ 471 (499)
..+++++.
T Consensus 57 ~~Lq~qLe 64 (81)
T 3qh9_A 57 AQLQEQVA 64 (81)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 269
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=86.97 E-value=24 Score=34.54 Aligned_cols=130 Identities=9% Similarity=-0.028 Sum_probs=58.7
Q ss_pred EEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEE-EECCEEEEEc----------CcCCCC---CccC
Q 010847 95 LLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVT-LVGSRLIIFG----------GEDRSR---KLLN 160 (499)
Q Consensus 95 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~-~~~~~lyv~G----------G~~~~~---~~~~ 160 (499)
|||..-.+........+.++|..|+.-...-..+..|.. .+|.+. .-+.++++.- |+.... .+.+
T Consensus 150 i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d 228 (462)
T 2ece_A 150 IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGN 228 (462)
T ss_dssp EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCC
T ss_pred EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCC
Confidence 776422121222256799999998864333221222222 222222 2233333332 232221 3478
Q ss_pred cEEEEECCCCeeEEeeecCCC-CCCCccceEEEEc--CcEEEEEcCCCCCCCCCcEEEEECCCCceEecc
Q 010847 161 DVHFLDLETMTWDAVEVTQTP-PAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPE 227 (499)
Q Consensus 161 ~v~~yd~~t~~W~~~~~~~~~-p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~ 227 (499)
.|.+||+.+.+-...-..+.. ..|| +....++ +.++|+..-.+.....+.|++|....+.|....
T Consensus 229 ~V~v~D~~~~k~~~tI~vg~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 229 RIHFWDLRKRKRIHSLTLGEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEEEEETTTTEEEEEEESCTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCcEeeEEecCCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 999999988643222111100 0011 1111122 456777654222223456666555557777654
No 270
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=86.82 E-value=9.3 Score=40.37 Aligned_cols=142 Identities=13% Similarity=0.036 Sum_probs=73.9
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.|+++||... -+++||+.++++..+... ..+....-.+++.. ++.|++... +-+.+||+.+.
T Consensus 482 ~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~lWigt~--------~Gl~~~~~~~~ 546 (758)
T 3ott_A 482 EGNVWVLLYNNK------GIDKINPRTREVTKLFAD-ELTGEKSPNYLLCDEDGLLWVGFH--------GGVMRINPKDE 546 (758)
T ss_dssp TSCEEEEETTCS------SEEEEETTTTEEEEECTT-TSCGGGCEEEEEECTTSCEEEEET--------TEEEEECC--C
T ss_pred CCCEEEEccCCC------CcEEEeCCCCceEEecCC-CcCCCcccceEEECCCCCEEEEec--------CceEEEecCCC
Confidence 467888655432 299999999998887421 11111111222222 467886421 24899999888
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWY 249 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~ 249 (499)
++..... ..+|. ..-.+++. .++.|++.+. +-+.+||+.+.+..... .+..... +++.. .+.-+
T Consensus 547 ~~~~~~~-~gl~~-~~i~~i~~-~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~G~l 611 (758)
T 3ott_A 547 SQQSISF-GSFSN-NEILSMTC-VKNSIWVSTT-------NGLWIIDRKTMDARQQN----MTNKRFT-SLLFDPKEDCV 611 (758)
T ss_dssp CCCBCCC-CC----CCEEEEEE-ETTEEEEEES-------SCEEEEETTTCCEEEC------CCCCCS-EEEEETTTTEE
T ss_pred ceEEecc-cCCCc-cceEEEEE-CCCCEEEECC-------CCeEEEcCCCceeEEec----CCCCcee-eeEEECCCCcE
Confidence 7765532 22332 22223333 4666777543 35899999988876642 2222222 23333 34455
Q ss_pred EEeCCCCCCCcceEEEEECC
Q 010847 250 IVGGGDNNNGCQETIVLNMT 269 (499)
Q Consensus 250 v~GG~~~~~~~~~~~~~d~~ 269 (499)
.|||.+ -+..|||.
T Consensus 612 ~fG~~~------Gl~~f~p~ 625 (758)
T 3ott_A 612 YLGGAD------GFGISHSN 625 (758)
T ss_dssp EEECBS------EEEEEEC-
T ss_pred EEecCC------ceEEEChh
Confidence 567643 24555554
No 271
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.80 E-value=18 Score=32.86 Aligned_cols=147 Identities=14% Similarity=0.046 Sum_probs=69.7
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.+++.|+.+ ..+.++|..++.-...-. ..... -.++.. .++.+++.|+.+ ..+.+||+.+.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~---~~~~~-v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQ---VTETP-VRAGKFIARKNWIIVGSDD------FRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEE---CCSSC-EEEEEEEGGGTEEEEEETT------SEEEEEETTTC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEee---ccCCc-EEEEEEeCCCCEEEEECCC------CEEEEEECCCC
Confidence 35566666643 348888988876433221 11111 112222 245566666643 35888998876
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEE
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENW 248 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l 248 (499)
+-...-. + ....-.+++...++.+++.|+.+ ..+.++|+.+.. ....... .....-.+++.. ++.+
T Consensus 88 ~~~~~~~-~---h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~--~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 88 EKVVDFE-A---HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFE--GHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp CEEEEEE-C---CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEEC--CCCSCEEEEEECTTCTTE
T ss_pred cEEEEEe-C---CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhc--ccCCcEEEEEECCCCCCE
Confidence 5322111 1 11111223333345466777654 358888876542 1110000 011111122222 3457
Q ss_pred EEEeCCCCCCCcceEEEEECCCC
Q 010847 249 YIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 249 ~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
++.|+.+. .+.+||+.+.
T Consensus 156 l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 156 FASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp EEEEETTS-----EEEEEETTCS
T ss_pred EEEEeCCC-----eEEEEECCCC
Confidence 77777543 4677887543
No 272
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=86.63 E-value=0.21 Score=51.03 Aligned_cols=9 Identities=0% Similarity=-0.064 Sum_probs=3.9
Q ss_pred ceEEEEEcC
Q 010847 300 EHHLVAFGG 308 (499)
Q Consensus 300 ~~~l~v~GG 308 (499)
+.+.+.+++
T Consensus 253 k~F~I~~~~ 261 (575)
T 2i1j_A 253 RKFIIKPID 261 (575)
T ss_dssp TEEEEEESC
T ss_pred CeEEEEEcc
Confidence 334444443
No 273
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=86.61 E-value=4.2 Score=32.14 Aligned_cols=50 Identities=18% Similarity=0.269 Sum_probs=27.1
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
++.++..+...+..+..++..+..++..++.+....+.....+++++..+
T Consensus 30 l~~~l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~L 79 (135)
T 2e7s_A 30 LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 79 (135)
T ss_dssp HHHHHHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555666666666666666555555555555555554444
No 274
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.23 E-value=19 Score=32.63 Aligned_cols=108 Identities=8% Similarity=0.051 Sum_probs=53.8
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCC--cEEEeecCCCCCCCCcceEEEEE----CCEEEEEcCcCCCCCccCcEEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLV----GSRLIIFGGEDRSRKLLNDVHFL 165 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~y 165 (499)
++.+++.|+.+ ..+.+||+.++ .+..+.. +......-.++.+ ++.+++.|+.+ ..+.+|
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYD------KTVKLW 86 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETT------SCEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCC------CeEEEE
Confidence 45566666643 23777776643 4444331 1111122223333 25677777754 358888
Q ss_pred ECCCC-------eeEEeeecCCCCCCCccceEEEE-cC--cEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 166 DLETM-------TWDAVEVTQTPPAPRYDHSAALH-AN--RYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 166 d~~t~-------~W~~~~~~~~~p~~r~~~~~~~~-~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
|+.+. .|..+..... .......+.+ .+ +.+++.|+.+ ..+.+||+.+..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLND---SKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTT
T ss_pred ecCCCcccccccCcceeeeecc---cCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChH
Confidence 88664 3344433211 1122223333 23 4466666644 368899987654
No 275
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=86.21 E-value=20 Score=32.69 Aligned_cols=165 Identities=7% Similarity=-0.003 Sum_probs=78.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecC-CCCCCCCcceEEEEECCEEEEE----cCcCC-------CCCcc
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS-GKVPVARGGHSVTLVGSRLIIF----GGEDR-------SRKLL 159 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-g~~p~~r~~~~~~~~~~~lyv~----GG~~~-------~~~~~ 159 (499)
+++||+.... ...+.+||+. ++...+... ...+.......++.-++.||+. |-... .....
T Consensus 96 dG~l~v~~~~------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 96 QQRLVHCEHG------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred CCCEEEEECC------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 5677776321 1348899986 666665421 0111111122222235678874 32210 01123
Q ss_pred CcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcc
Q 010847 160 NDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG 238 (499)
Q Consensus 160 ~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~ 238 (499)
..+++||+.+.++..+. ....| ..++...+ ..||+..........+.|++||+..............+.. .-
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~~~p-----~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~p 241 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DLDHP-----NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LP 241 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EESSE-----EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CC
T ss_pred CeEEEEcCCCCcEEEEe-cCCCC-----cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CC
Confidence 57999999888877664 11111 22333334 4577754321111125799999876543221110111111 11
Q ss_pred cEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEEec
Q 010847 239 HAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 239 ~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
..++.. ++.+|+..+ ..+++||+.......+.
T Consensus 242 dgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CSEEECTTSCEEECCS-------SEEEEECTTSCEEEEEE
T ss_pred CeEEECCCCCEEEecC-------CcEEEECCCCCEEEEEE
Confidence 122222 456776532 24899999766555543
No 276
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=86.11 E-value=20 Score=32.80 Aligned_cols=104 Identities=17% Similarity=0.213 Sum_probs=52.2
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-------CCEEEEEcCcCCCCCccCcEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-------GSRLIIFGGEDRSRKLLNDVHF 164 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~v~~ 164 (499)
++.+++.|+.++ .+.++|+....-..+. + .... -.++... ++.+++.||.+ ..+.+
T Consensus 118 ~~~~l~s~s~D~------~i~vwd~~~~~~~~~~--~-h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~ 180 (319)
T 3frx_A 118 KASMIISGSRDK------TIKVWTIKGQCLATLL--G-HNDW--VSQVRVVPNEKADDDSVTIISAGND------KMVKA 180 (319)
T ss_dssp TSCEEEEEETTS------CEEEEETTSCEEEEEC--C-CSSC--EEEEEECCC------CCEEEEEETT------SCEEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCeEEEEe--c-cCCc--EEEEEEccCCCCCCCccEEEEEeCC------CEEEE
Confidence 456677776543 3788888655333332 1 1100 1111111 22355555543 35888
Q ss_pred EECCCCeeEEeeecCCCCCCCccc-eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 165 LDLETMTWDAVEVTQTPPAPRYDH-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 165 yd~~t~~W~~~~~~~~~p~~r~~~-~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
+|+.+.+-...-. + ..... +++...++.+++.||.+ ..+.+||+.+.+
T Consensus 181 wd~~~~~~~~~~~-~----h~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~~~~~ 229 (319)
T 3frx_A 181 WNLNQFQIEADFI-G----HNSNINTLTASPDGTLIASAGKD-----GEIMLWNLAAKK 229 (319)
T ss_dssp EETTTTEEEEEEC-C----CCSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTE
T ss_pred EECCcchhheeec-C----CCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 9987765432211 1 11112 22333455567777754 368899988765
No 277
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=85.92 E-value=31 Score=34.66 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=56.0
Q ss_pred EEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cC-cEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 146 LIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-AN-RYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 146 lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~-~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
+++.|+.+ ..+.+||+.+.+-...-. ..........++.+ .+ +.+++.|+.+ ..+.+||+.+...
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCE
T ss_pred EEEEEeCC------CcEEEEeCCCcceeeeec--ccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCE
Confidence 66666643 368899987765432211 10000002223333 34 5566766654 3689999887764
Q ss_pred EecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 224 SQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 224 ~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
...-..........-.+++..++..++.|+.+ ..+.+||+.+....
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCV 287 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEE
T ss_pred eEEecccccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEE
Confidence 43210000011111112222266677777643 24788898876544
No 278
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=85.63 E-value=3.7 Score=28.55 Aligned_cols=67 Identities=21% Similarity=0.305 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 010847 381 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 454 (499)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 454 (499)
.+++.|-.+..++-........-...|-.+++++..+.+-+. .++...++-..+++.++.|++++++
T Consensus 9 kevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~-------~El~s~~~~~~r~~~ri~elEeElk 75 (77)
T 2w83_C 9 REVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQ-------GELEAVKQAKLKLEEKNRELEEELR 75 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444444333222222233444444444444444443 3333333334444444444444443
No 279
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=85.45 E-value=14 Score=30.22 Aligned_cols=6 Identities=33% Similarity=0.728 Sum_probs=2.3
Q ss_pred hhhHHH
Q 010847 405 SRFREK 410 (499)
Q Consensus 405 ~~l~~~ 410 (499)
.+|+..
T Consensus 58 ~qlre~ 63 (169)
T 3k29_A 58 RQLREQ 63 (169)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 280
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.38 E-value=23 Score=32.72 Aligned_cols=146 Identities=12% Similarity=-0.017 Sum_probs=74.3
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.+|+++.. -..++.||+.++........ ......+..-++.+++... ..
T Consensus 62 ~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------------------~~v~~i~~~~dg~l~v~~~--------~g 110 (326)
T 2ghs_A 62 TAWWFNIL-----ERELHELHLASGRKTVHALP------------------FMGSALAKISDSKQLIASD--------DG 110 (326)
T ss_dssp EEEEEEGG-----GTEEEEEETTTTEEEEEECS------------------SCEEEEEEEETTEEEEEET--------TE
T ss_pred EEEEEECC-----CCEEEEEECCCCcEEEEECC------------------CcceEEEEeCCCeEEEEEC--------CC
Confidence 56666432 23689999998876554321 1112222234677777541 23
Q ss_pred EEEEECCCCcEEEeecCCC-CCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccce
Q 010847 111 VRFIDLETNLCGVMETSGK-VPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHS 189 (499)
Q Consensus 111 ~~~yd~~t~~W~~~~~~g~-~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~ 189 (499)
+++||+.++....+..... .+..+....++.-++++|+.............+++|| +.+...+..... ....
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~-----~~~~ 183 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS-----IPNS 183 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES-----SEEE
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc-----ccCC
Confidence 9999999999877752111 1111111112222467776321111111245789998 566655432101 1112
Q ss_pred EEEEcC-cEEEEEcCCCCCCCCCcEEEEECC
Q 010847 190 AALHAN-RYLIVFGGCSHSIFFNDLHVLDLQ 219 (499)
Q Consensus 190 ~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~ 219 (499)
++...+ +.+|+.... .+.|++||+.
T Consensus 184 i~~s~dg~~lyv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred eEEcCCCCEEEEEECC-----CCEEEEEEcc
Confidence 333323 356775432 2579999975
No 281
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=85.32 E-value=2.3 Score=33.61 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=14.7
Q ss_pred HhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHh
Q 010847 402 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAE 435 (499)
Q Consensus 402 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (499)
.+..+|...+........+.+++...+.++++.+
T Consensus 46 ~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~L 79 (135)
T 2e7s_A 46 DEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 79 (135)
T ss_dssp HHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444433
No 282
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.25 E-value=23 Score=32.67 Aligned_cols=146 Identities=13% Similarity=0.047 Sum_probs=74.4
Q ss_pred CEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCce
Q 010847 144 SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 144 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W 223 (499)
+.+|+++.. ...+++||+.+.....+.. + ..-.+++...++.+++... +.+++||+.++..
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~~~~~~~~----~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASGRKTVHAL----P--FMGSALAKISDSKQLIASD-------DGLFLRDTATGVL 121 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTTEEEEEEC----S--SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCE
T ss_pred CEEEEEECC------CCEEEEEECCCCcEEEEEC----C--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcE
Confidence 678877543 3469999999887655432 1 1223333444666766542 3599999998887
Q ss_pred EecccCCC-CCCcCcccEEEEE-CCEEEEEeCCC-CCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCc
Q 010847 224 SQPEIKGD-LVTGRAGHAGITI-DENWYIVGGGD-NNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE 300 (499)
Q Consensus 224 ~~~~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~-~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~ 300 (499)
..+..... .+..+. ..++.. ++++|+..... .......+|++| +.....+.... ......+...+.
T Consensus 122 ~~~~~~~~~~~~~~~-~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~--------~~~~~i~~s~dg 190 (326)
T 2ghs_A 122 TLHAELESDLPGNRS-NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI--------SIPNSICFSPDG 190 (326)
T ss_dssp EEEECSSTTCTTEEE-EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE--------SSEEEEEECTTS
T ss_pred EEEeeCCCCCCCCCC-CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC--------cccCCeEEcCCC
Confidence 76532111 111111 122222 45666643211 111235689998 45555442110 011112222233
Q ss_pred eEEEEEcCCCCCCCceEEEEECC
Q 010847 301 HHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 301 ~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
..||+.... ...+++|++.
T Consensus 191 ~~lyv~~~~----~~~I~~~d~~ 209 (326)
T 2ghs_A 191 TTGYFVDTK----VNRLMRVPLD 209 (326)
T ss_dssp CEEEEEETT----TCEEEEEEBC
T ss_pred CEEEEEECC----CCEEEEEEcc
Confidence 466665432 2478888875
No 283
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=85.18 E-value=11 Score=28.80 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=8.6
Q ss_pred hhhHHHHHHHHHHHHHHhHH
Q 010847 438 RCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 438 ~~~~~~~~~~e~~~~l~~~~ 457 (499)
++..|..+++.-++.|+.++
T Consensus 46 qV~~L~~~~q~sE~~L~~Lq 65 (112)
T 1x79_B 46 QISALVLRAQASEILLEELQ 65 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444
No 284
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.01 E-value=39 Score=35.00 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=70.4
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
++.+++.|+.+ ..+.++|+.+..-...-. +. ...-.+++...++..++.|+.+ ..+.++|+....
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~-~h---~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~ 505 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFV-GH---TKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGEC 505 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEE-CC---SSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEe-CC---CCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCc
Confidence 45667777654 358899998875432211 11 1111222222344456666654 357777765443
Q ss_pred eEecccCCCCCCcCcccEEEEE-CC---EEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEc
Q 010847 223 WSQPEIKGDLVTGRAGHAGITI-DE---NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIE 298 (499)
Q Consensus 223 W~~~~~~~~~p~~r~~~~~~~~-~~---~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~ 298 (499)
-..+. ......+....++.+ .+ .+++.|+.++ .+.++|+.+..-... +.. +......+...
T Consensus 506 ~~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~--~~~------h~~~v~~v~~s 570 (694)
T 3dm0_A 506 KYTIS--EGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRST--LAG------HTGYVSTVAVS 570 (694)
T ss_dssp EEEEC--SSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEE--ECC------CSSCEEEEEEC
T ss_pred ceeec--cCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEE--EcC------CCCCEEEEEEe
Confidence 22221 111111111222333 22 3566666443 477888877654321 111 11123333444
Q ss_pred CceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 299 GEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 299 ~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.+..+++.||.++ .+.++|+...
T Consensus 571 pdg~~l~sg~~Dg----~i~iwd~~~~ 593 (694)
T 3dm0_A 571 PDGSLCASGGKDG----VVLLWDLAEG 593 (694)
T ss_dssp TTSSEEEEEETTS----BCEEEETTTT
T ss_pred CCCCEEEEEeCCC----eEEEEECCCC
Confidence 3334566677665 5667777543
No 285
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=85.00 E-value=6.2 Score=28.45 Aligned_cols=27 Identities=33% Similarity=0.229 Sum_probs=10.6
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHHhHH
Q 010847 431 QLVAERSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 431 ~~~~~~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
+++.++..+.+|.-++++.+.++..++
T Consensus 28 Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~ 54 (83)
T 2xdj_A 28 QLSDNQSDIDSLRGQIQENQYQLNQVV 54 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 333333333444444444444443333
No 286
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=84.95 E-value=12 Score=28.98 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=15.2
Q ss_pred HHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHH
Q 010847 401 RTENSRFREKIDEVNSTHSELSKELSSVQGQLVA 434 (499)
Q Consensus 401 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (499)
+..+.+|+..-...++++..+..++..++..+++
T Consensus 45 qgKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K 78 (167)
T 4gkw_A 45 QGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEK 78 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHH
Confidence 3344444444444444444444444444444433
No 287
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=84.93 E-value=28 Score=33.32 Aligned_cols=107 Identities=13% Similarity=0.050 Sum_probs=56.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++.+++.|+.+ ..+.+||+.+..-...- ..+.......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCC
Confidence 36677777653 34999999887643332 11111112233333 45677777654 3589999988
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-----cCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-----ANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-----~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
......-. .+ .......+.+ .++.+++.|+.+ ..+.+||+.+..
T Consensus 246 ~~~~~~~~---~~-~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 294 (437)
T 3gre_A 246 NVLIRSWS---FG-DHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGH 294 (437)
T ss_dssp TEEEEEEB---CT-TCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTE
T ss_pred ccEEEEEe---cC-CCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCc
Confidence 66533211 01 1111112211 245456666543 358889987765
No 288
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=84.89 E-value=18 Score=31.19 Aligned_cols=153 Identities=12% Similarity=0.064 Sum_probs=80.5
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecC---CCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 161 (499)
+++.+.+.+|+|=|. -+|+++.....+...... ..+|. ... ++... ++++|+|=|. .
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG~--------~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRGR--------K 89 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEETT--------E
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEccC--------E
Confidence 455678999999763 288887655444333221 12342 222 22223 5899999662 4
Q ss_pred EEEEECCCCee---EEeeecCCCCCCCccc-eEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-----cccC-C
Q 010847 162 VHFLDLETMTW---DAVEVTQTPPAPRYDH-SAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIK-G 230 (499)
Q Consensus 162 v~~yd~~t~~W---~~~~~~~~~p~~r~~~-~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~-~ 230 (499)
+|.|+-.+..- ..+...| +|.....- ++... +++++|+|-| +..|+||..+.+-.. +... .
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHST
T ss_pred EEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCC
Confidence 66665322111 1121112 23211112 22222 3578999988 478999987653221 1000 1
Q ss_pred CCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceE
Q 010847 231 DLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWS 274 (499)
Q Consensus 231 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~ 274 (499)
.+| ..-.++...++.+|+|-| +..|+||..+..-.
T Consensus 162 Gip--~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 162 GIG--DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp TSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCC--CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 122 122344456889999977 26889998776533
No 289
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=84.79 E-value=42 Score=36.85 Aligned_cols=145 Identities=14% Similarity=-0.008 Sum_probs=74.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEE-EEECCCCeeEEeeecCCCCCCCccc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVH-FLDLETMTWDAVEVTQTPPAPRYDH 188 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~-~yd~~t~~W~~~~~~~~~p~~r~~~ 188 (499)
.++.++..++....+. ..+.......+.. +++.+++++. .+.++ ++|+.+.....+. + ......
T Consensus 318 ~i~~~~~~~~~~~~~~---~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~--~---~~~~~~ 382 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVP---EPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFE--E---NLGNVF 382 (1045)
T ss_dssp EEEEECTTSSBEEECS---CCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECC--C---CCCSEE
T ss_pred EEEEEcCCCCceEEcc---CCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEec--C---Ccccee
Confidence 4888888877655443 1121011112222 4444444332 23688 8999887655443 1 111222
Q ss_pred eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCC-----CCCcceE
Q 010847 189 SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDN-----NNGCQET 263 (499)
Q Consensus 189 ~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~-----~~~~~~~ 263 (499)
.++...++..++++... +.++++|+.++.-..+.... .......+..-+++.+++++.+. ......+
T Consensus 383 ~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~---~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSR---EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp EEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECS---SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred eeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCC---CCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 33333455455565532 47999999988766653111 11111112222455555554332 1223579
Q ss_pred EEEECCCCceEEec
Q 010847 264 IVLNMTKLAWSILT 277 (499)
Q Consensus 264 ~~~d~~~~~W~~l~ 277 (499)
+++|+.+.....+.
T Consensus 455 ~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 455 HVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEETTTTEEEECS
T ss_pred EEEECCCCcEEEee
Confidence 99999988755543
No 290
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=84.77 E-value=15 Score=30.00 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=12.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhHH
Q 010847 436 RSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 436 ~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
.++...++.++..++.+|+...
T Consensus 69 sqrEd~yEeqIk~L~~kLKEAE 90 (155)
T 2efr_A 69 SQKEDKYEEEIKVLSDKLKEAE 90 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666666666655554
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.72 E-value=25 Score=32.59 Aligned_cols=153 Identities=6% Similarity=0.003 Sum_probs=79.0
Q ss_pred ECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECC-
Q 010847 91 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLE- 168 (499)
Q Consensus 91 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~- 168 (499)
-++.+|+.|.. . .+++-+-.-.+|+.+.. +.+...+.++.. ++.+|++|-. ..++.-+-.
T Consensus 131 ~~~~~~~~~~~---g----~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-------G~~~~S~d~g 192 (327)
T 2xbg_A 131 GNGSAEMITNV---G----AIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-------GSFYSTWEPG 192 (327)
T ss_dssp ETTEEEEEETT---C----CEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-------SSEEEEECTT
T ss_pred CCCCEEEEeCC---c----cEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-------CcEEEEeCCC
Confidence 46788887641 1 25554333568999862 222223333333 4566666532 134444322
Q ss_pred CCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECC-CCceEecccCCCCCCcCcccEEEEE-CC
Q 010847 169 TMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGHAGITI-DE 246 (499)
Q Consensus 169 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~ 246 (499)
..+|+.+.. +.+...+.++...++.+|+.+..+ .+++.+.. ..+|+.+.. +.++.....++++.. ++
T Consensus 193 G~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~G------~~~~s~~D~G~tW~~~~~-~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 193 QTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNGG------KIAFSDPDNSENWGELLS-PLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp CSSCEEEEC----CSSSCEEEEEECTTSCEEEEETTT------EEEEEETTEEEEECCCBC-TTSSCCSCEEEEEESSSS
T ss_pred CCceeECCC----CCCCccceeEECCCCCEEEEeCCc------eEEEecCCCCCeeEeccC-CcccCCcceEEEEecCCC
Confidence 578998853 334445555544566678776421 35554333 457988642 112222223344433 45
Q ss_pred EEEEEeCCCCCCCcceEEEEECCCCceEEecc
Q 010847 247 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 278 (499)
Q Consensus 247 ~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~ 278 (499)
.+|++|+.. .+++-.-.-.+|+.+..
T Consensus 262 ~~~~~g~~g------~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 262 EVWLAGGAG------ALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp CEEEEESTT------CEEEESSTTSSCEECGG
T ss_pred EEEEEeCCC------eEEEeCCCCcccEEcCc
Confidence 788877621 24433334578998764
No 292
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=84.60 E-value=5.6 Score=39.46 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=10.8
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHH
Q 010847 454 ESSQTIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 454 ~~~~~~~~e~~~~~~~~~~~~~~~~ 478 (499)
.++++++.|+-.+.++++..+-+.+
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444433
No 293
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=84.57 E-value=18 Score=30.89 Aligned_cols=155 Identities=12% Similarity=0.101 Sum_probs=77.3
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCC---CcEEEeecC-CCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcE
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET---NLCGVMETS-GKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDV 162 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t---~~W~~~~~~-g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v 162 (499)
+++.+.+++|+|-|. .+|+++... +-=..+... ..+|. ...++....++++|+|-| +.+
T Consensus 10 A~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg--------~~y 72 (196)
T 3c7x_A 10 TVAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG--------DKH 72 (196)
T ss_dssp EEEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET--------TEE
T ss_pred EEEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC--------CEE
Confidence 345678999999873 277775431 100112111 12443 222222224678999865 347
Q ss_pred EEEECCCCee---EEeeecC-CCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe--cccCCCC-CCc
Q 010847 163 HFLDLETMTW---DAVEVTQ-TPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ--PEIKGDL-VTG 235 (499)
Q Consensus 163 ~~yd~~t~~W---~~~~~~~-~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~--~~~~~~~-p~~ 235 (499)
|.|+..+... ..+...+ .+|...-..+.....++++|+|-| +..|+||..+.+-.. +.....+ ..|
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip 145 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIP 145 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCC
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcC
Confidence 8887532111 1111111 133222222222223677999987 468999987654221 0000011 112
Q ss_pred CcccEEEEE-CC-EEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 236 RAGHAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 236 r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
..-.++... ++ .+|+|-| +..|+||..+..
T Consensus 146 ~~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 146 ESPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SSCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CCcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 222344444 33 8999977 268999987754
No 294
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=84.08 E-value=24 Score=31.83 Aligned_cols=185 Identities=8% Similarity=0.045 Sum_probs=90.5
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCc--eEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCC
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLA--WSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDS 108 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 108 (499)
.+++.|..+ ..+.++|+.+++ |+.-.... ....+..+.-++.||+.+ .
T Consensus 6 ~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~-----------------~~~~~~~~~pdG~ilvs~--------~ 55 (276)
T 3no2_A 6 HLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKG-----------------WECNSVAATKAGEILFSY--------S 55 (276)
T ss_dssp EEEEECTTC-----SEEEEEETTTTEEEEEEECCTT-----------------CCCCEEEECTTSCEEEEC--------B
T ss_pred cEEEeeCCC-----CEEEEEECCCCeEEEEeCCCcc-----------------CCCcCeEECCCCCEEEeC--------C
Confidence 566665532 458899998886 55432110 122222333367787732 2
Q ss_pred ceEEEEECCCC--cEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCCe-eEEeeecCCCCCC
Q 010847 109 MIVRFIDLETN--LCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETMT-WDAVEVTQTPPAP 184 (499)
Q Consensus 109 ~~~~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p~~ 184 (499)
+.++.||+ ++ .|+-.. +....-+++... ++++++..... ...++.+|+.... |+.... +..+.+
T Consensus 56 ~~V~~~d~-~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~-~~~~~~ 123 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFE-TGIERP 123 (276)
T ss_dssp SEEEEECT-TSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEEC-CSCSSG
T ss_pred CCEEEECC-CCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEecc-CCCCcc
Confidence 34999998 55 355432 111122333333 45555543221 2357888874432 433211 111111
Q ss_pred -CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc--eEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCc
Q 010847 185 -RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE--WSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGC 260 (499)
Q Consensus 185 -r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~ 260 (499)
...+.+....++.+++.... .+.+..||++ ++ |+.-. +. ..+++..+ ++.++|++..+
T Consensus 124 ~~~~~~v~~~~~G~~lv~~~~-----~~~v~~~d~~-G~~~w~~~~--~~-----~~~~~~~~~~g~~~v~~~~~----- 185 (276)
T 3no2_A 124 HAQFRQINKNKKGNYLVPLFA-----TSEVREIAPN-GQLLNSVKL--SG-----TPFSSAFLDNGDCLVACGDA----- 185 (276)
T ss_dssp GGSCSCCEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEEEC--SS-----CCCEEEECTTSCEEEECBTT-----
T ss_pred cccccCceECCCCCEEEEecC-----CCEEEEECCC-CCEEEEEEC--CC-----CccceeEcCCCCEEEEeCCC-----
Confidence 11112223334435554322 2468999987 43 66521 11 12334444 56777765532
Q ss_pred ceEEEEECCCCc--eEE
Q 010847 261 QETIVLNMTKLA--WSI 275 (499)
Q Consensus 261 ~~~~~~d~~~~~--W~~ 275 (499)
..++.||+.+++ |+.
T Consensus 186 ~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp SEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCcCCcEEEEe
Confidence 358999998654 664
No 295
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=84.03 E-value=26 Score=32.22 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=53.9
Q ss_pred cCcEEEEECCCCee-EEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCC---C-CCcEEEEECCCCceEecccCCCCC
Q 010847 159 LNDVHFLDLETMTW-DAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSI---F-FNDLHVLDLQTNEWSQPEIKGDLV 233 (499)
Q Consensus 159 ~~~v~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~---~-~~~i~~~d~~~~~W~~~~~~~~~p 233 (499)
...++.+|+.+... ..+.. + .........++ +++.+...... . ...+|.+| ++.+..+...
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---- 216 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---- 216 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----
T ss_pred cceEEEEECCCCeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----
Confidence 35799999999887 55542 1 22334444566 55555433221 2 45788888 6677665321
Q ss_pred CcCcccEEEEECCEEEEEeCCCCC---CCcceEEEEECCCCceEEec
Q 010847 234 TGRAGHAGITIDENWYIVGGGDNN---NGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 234 ~~r~~~~~~~~~~~l~v~GG~~~~---~~~~~~~~~d~~~~~W~~l~ 277 (499)
.......-+++.+++++.... .....++++| +..+..+.
T Consensus 217 ---~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 217 ---VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp ---ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred ---cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 111122334544444432221 1245789999 66666553
No 296
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=82.97 E-value=29 Score=31.94 Aligned_cols=159 Identities=8% Similarity=0.124 Sum_probs=73.2
Q ss_pred ECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 91 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 91 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
..+ +++.|+.+. .+.+||+.++.+..+........ .....++.+ ++.+++.|+.+. .+.++|+.
T Consensus 23 s~~-~las~~~D~------~i~lw~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~las~s~D~------~v~iw~~~ 88 (330)
T 2hes_X 23 SQG-ILATGSTDR------KIKLVSVKYDDFTLIDVLDETAH-KKAIRSVAWRPHTSLLAAGSFDS------TVSIWAKE 88 (330)
T ss_dssp ETT-EEEEEESSS------CEEEEECSSSCCEEEEEECTTCC-CSCEEEEEECTTSSEEEEEETTS------CEEEEEC-
T ss_pred CCC-EEEEEcCCC------EEEEEEecCCCeEEEEEEecCCc-cCCEEEEEECCCCCEEEEEeCCC------cEEEEEcc
Confidence 345 666666433 38888988765544432101001 111222333 456777776543 47777764
Q ss_pred CC-----eeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCC--CceEecccCCCCCCcCcccE
Q 010847 169 TM-----TWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQT--NEWSQPEIKGDLVTGRAGHA 240 (499)
Q Consensus 169 t~-----~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~--~~W~~~~~~~~~p~~r~~~~ 240 (499)
.. .+..+.... ........+.+ .++.+++.|+.+ ..+.++|+.. ..+..+.... .....-.
T Consensus 89 ~~~~~~~~~~~~~~~~---~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~---~h~~~v~ 157 (330)
T 2hes_X 89 ESADRTFEMDLLAIIE---GHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQ---EHSQDVK 157 (330)
T ss_dssp ------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEEC---CCSSCEE
T ss_pred cCcCccccceeEEEEc---CCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEec---cCCCceE
Confidence 32 232222210 01111222333 355567777654 3588888743 2343322101 0111112
Q ss_pred EEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccC
Q 010847 241 GITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSV 279 (499)
Q Consensus 241 ~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~ 279 (499)
.+.. ++.+++.|+.+. .+.++|..+..|..+..+
T Consensus 158 ~v~~~p~~~~l~s~s~D~-----~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDD-----TVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp EEEECSSSSEEEEEETTS-----CEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCCEEEEEcCCC-----eEEEEECCCCCeeEEEEc
Confidence 2222 456777776543 366777777766655444
No 297
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=82.57 E-value=15 Score=28.50 Aligned_cols=12 Identities=33% Similarity=0.570 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q 010847 442 LEAQIAELQKML 453 (499)
Q Consensus 442 ~~~~~~e~~~~l 453 (499)
|+.+++-++.++
T Consensus 88 LE~~iesL~eEl 99 (119)
T 3ol1_A 88 LERKVESLQEEI 99 (119)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 298
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=82.21 E-value=12 Score=30.35 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 458 TIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
+++++..++.+++.++..+++++.
T Consensus 81 q~~~ek~~r~e~k~~l~~ql~qv~ 104 (150)
T 4dci_A 81 QVAGKRSELEEQKRNLLQQQAQVR 104 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555555666665555555443
No 299
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=82.18 E-value=28 Score=31.31 Aligned_cols=149 Identities=9% Similarity=0.014 Sum_probs=73.2
Q ss_pred CEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 93 TKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 93 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
+++++.|.. ...++.+|..+++ |+... ... .......+.-+++|++.+ .+.++.||+ ++
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~---~~~-~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL---EKG-WECNSVAATKAGEILFSY--------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC---CTT-CCCCEEEECTTSCEEEEC--------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC---Ccc-CCCcCeEECCCCCEEEeC--------CCCEEEECC-CC
Confidence 567777653 2448999998885 55442 110 112223333467787732 245999998 44
Q ss_pred --eeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCc-eEecccCCCC--CCcCcccEEEEEC
Q 010847 171 --TWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNE-WSQPEIKGDL--VTGRAGHAGITID 245 (499)
Q Consensus 171 --~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~-W~~~~~~~~~--p~~r~~~~~~~~~ 245 (499)
.|+.-. +.....+++....++.+++..... ...++.+|++... |+.. ..... +...........+
T Consensus 66 ~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~-~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTE-FETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEE-ECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEe-ccCCCCcccccccCceECCC
Confidence 365332 111223344444555455543321 2367888875442 4432 11111 1111112223335
Q ss_pred CEEEEEeCCCCCCCcceEEEEECCCC-ceEE
Q 010847 246 ENWYIVGGGDNNNGCQETIVLNMTKL-AWSI 275 (499)
Q Consensus 246 ~~l~v~GG~~~~~~~~~~~~~d~~~~-~W~~ 275 (499)
+.+++.... ...+..||+.-. .|+.
T Consensus 136 G~~lv~~~~-----~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 136 GNYLVPLFA-----TSEVREIAPNGQLLNSV 161 (276)
T ss_dssp SCEEEEETT-----TTEEEEECTTSCEEEEE
T ss_pred CCEEEEecC-----CCEEEEECCCCCEEEEE
Confidence 566665432 235889998732 2553
No 300
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=82.00 E-value=7.3 Score=29.87 Aligned_cols=14 Identities=7% Similarity=0.088 Sum_probs=5.2
Q ss_pred HHHHHHHhHHHHHH
Q 010847 462 EVQILRQQKSAFEQ 475 (499)
Q Consensus 462 e~~~~~~~~~~~~~ 475 (499)
++..+.++++.+..
T Consensus 86 ~i~~l~~~~~~l~~ 99 (112)
T 1l8d_A 86 RKSELERELRRIDM 99 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 301
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=81.90 E-value=2.2 Score=27.85 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=15.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKML 453 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 453 (499)
.+.++.+++.++.++..|..+++|++.+|
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555554
No 302
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=81.27 E-value=13 Score=34.32 Aligned_cols=139 Identities=14% Similarity=-0.063 Sum_probs=68.8
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C-CEEEEEcCcCCCCCccCcEEEEECCC---CeeEEeeecCCCCC
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-G-SRLIIFGGEDRSRKLLNDVHFLDLET---MTWDAVEVTQTPPA 183 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~v~~yd~~t---~~W~~~~~~~~~p~ 183 (499)
..+++||+.++....+......| ..++.. + +.||+.-. ..+.|++|++.+ .....+.. .+.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p-----~gia~~~dg~~lyv~d~------~~~~I~~~~~~~~~~~~~~~~~~---~~g 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP-----GGAEVSADSSFVLVAEF------LSHQIVKYWLEGPKKGTAEVLVK---IPN 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC-----CEEEECTTSSEEEEEEG------GGTEEEEEESSSTTTTCEEEEEE---CSS
T ss_pred ceEEEEeCCCCEEEEeccCCccC-----cceEECCCCCEEEEEeC------CCCeEEEEECCCCcCCccceEEe---CCC
Confidence 46999999888766553211122 123332 3 35777622 135789999875 23443331 221
Q ss_pred CCccceEEEEcCcEEEEEcCCCCC-----CCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCC
Q 010847 184 PRYDHSAALHANRYLIVFGGCSHS-----IFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNN 258 (499)
Q Consensus 184 ~r~~~~~~~~~~~~l~v~GG~~~~-----~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 258 (499)
-..++...++.|||....... ...+.+.+||+....-..+......+ .....+++..++.|||....
T Consensus 231 ---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~~---- 302 (322)
T 2fp8_A 231 ---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTLF---- 302 (322)
T ss_dssp ---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECSS----
T ss_pred ---CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeecC----
Confidence 123344445567776432100 01246889998654444443211111 12222344457788876432
Q ss_pred CcceEEEEECCC
Q 010847 259 GCQETIVLNMTK 270 (499)
Q Consensus 259 ~~~~~~~~d~~~ 270 (499)
.+.+.+|++..
T Consensus 303 -~~~i~~~~~~~ 313 (322)
T 2fp8_A 303 -HGSVGILVYDK 313 (322)
T ss_dssp -CSEEEEEEC--
T ss_pred -CCceEEEeccc
Confidence 23577777643
No 303
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=81.05 E-value=12 Score=26.10 Aligned_cols=27 Identities=26% Similarity=0.393 Sum_probs=12.7
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHh
Q 010847 409 EKIDEVNSTHSELSKELSSVQGQLVAE 435 (499)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (499)
+++++.+..+.+++..++..++.++.-
T Consensus 7 ~kLq~~E~~N~~Le~~v~~le~~Le~s 33 (72)
T 3cve_A 7 MKLQEVEIRNKDLEGQLSEMEQRLEKS 33 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 344444444444544444444444443
No 304
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=81.04 E-value=23 Score=32.24 Aligned_cols=156 Identities=11% Similarity=-0.019 Sum_probs=77.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
++.||+.+.. ...+++|++ ++....... +... -..++. -+++||+.... ...+..||+. .
T Consensus 56 g~~l~~~d~~------~~~i~~~~~-~g~~~~~~~----~~~~-~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g 116 (305)
T 3dr2_A 56 QRTLVWSDLV------GRRVLGWRE-DGTVDVLLD----ATAF-TNGNAVDAQQRLVHCEHG------RRAITRSDAD-G 116 (305)
T ss_dssp GTEEEEEETT------TTEEEEEET-TSCEEEEEE----SCSC-EEEEEECTTSCEEEEETT------TTEEEEECTT-S
T ss_pred CCEEEEEECC------CCEEEEEeC-CCCEEEEeC----CCCc-cceeeECCCCCEEEEECC------CCEEEEECCC-C
Confidence 4567776543 234899998 555554432 1111 122222 25678776321 2358888876 6
Q ss_pred eeEEeeecCCCCCCCccceEEEEcCcEEEEE----cCCCC--------CCCCCcEEEEECCCCceEecccCCCCCCcCcc
Q 010847 171 TWDAVEVTQTPPAPRYDHSAALHANRYLIVF----GGCSH--------SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG 238 (499)
Q Consensus 171 ~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~----GG~~~--------~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~ 238 (499)
+...+...........-..++...++.+|+. |-... ....+.|++||+.++++..+. ... ..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~---~p 190 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLD---HP 190 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EES---SE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCC---CC
Confidence 6655542111000111123444456667774 32110 012357999999888877652 111 11
Q ss_pred cEEEEE-CC-EEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 239 HAGITI-DE-NWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 239 ~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
..++.. ++ .+|+..........+.+++||+....
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 233333 23 57776442211123578999887554
No 305
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=80.76 E-value=16 Score=27.50 Aligned_cols=72 Identities=7% Similarity=0.076 Sum_probs=40.8
Q ss_pred hhhhHHHHHHhhc--cchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHH
Q 010847 404 NSRFREKIDEVNS--THSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 404 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~ 477 (499)
...++..+..+.. ..++..+.+.+++..+++.++-+++++.+++.+.-. .-.++..++..++.+++.+..++
T Consensus 28 ~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s--~R~~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 28 LEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLT--FRNPMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445555555422 224444556666666666666666665555444211 12267778888888877776654
No 306
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=80.50 E-value=22 Score=28.97 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKML 453 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 453 (499)
+..+...+.....|.+..++.++.+++.+
T Consensus 79 Ik~L~~kLKEAE~RAE~AERsv~kLEk~i 107 (155)
T 2efr_A 79 IKVLSDKLKEAETRAEFAERSVTKLEKSI 107 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334444444444444443
No 307
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=80.46 E-value=4.7 Score=39.05 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHH
Q 010847 422 SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQT 458 (499)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~ 458 (499)
+.+++.++++..++++.+.+++.+++++++++.+.+.
T Consensus 9 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 45 (403)
T 4etp_A 9 KEKIAALKEKIAALKEKIKDTELGMKELNEILIKEET 45 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444555444444443
No 308
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=80.42 E-value=50 Score=33.03 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=57.0
Q ss_pred CEEEEEccc-CCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 93 TKLLILGGH-YKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 93 ~~iyv~GG~-~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
+..++.|+. ++ .+.+||..++.... . ..........++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 456 ~~~l~~~~~~d~------~i~~~~~~~~~~~~-~---~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEGN------TIQVFKLSDLEVSF-D---LKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTTS------CEEEEETTEEEEEE-E---CSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEeecCCC------eEEEEECCCccccc-c---ccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCC
Confidence 555566654 22 38999998876543 2 22222222333333 56677777653 3589999987
Q ss_pred CeeEEeeecCCCCC-CCccceEEEE-c----------CcEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 170 MTWDAVEVTQTPPA-PRYDHSAALH-A----------NRYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 170 ~~W~~~~~~~~~p~-~r~~~~~~~~-~----------~~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
.+-... ... .......+.+ . ++.+++.|+.+ ..+.+||+.+.
T Consensus 520 ~~~~~~-----~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~ 573 (615)
T 1pgu_A 520 REVKTS-----RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSVKRP 573 (615)
T ss_dssp TEEEEC-----CSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCEEEEESSCT
T ss_pred CcceeE-----eecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcEEEEECCCC
Confidence 654322 111 1222233333 3 45567777654 36999998875
No 309
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=80.26 E-value=7.7 Score=27.39 Aligned_cols=23 Identities=17% Similarity=0.352 Sum_probs=9.1
Q ss_pred hhhhhHHHHHHhhccchHHHHHH
Q 010847 403 ENSRFREKIDEVNSTHSELSKEL 425 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~ 425 (499)
++..|+..+.+++.+.-..++.+
T Consensus 27 Ei~~Lr~kv~elEnErlQyEkKL 49 (81)
T 3qh9_A 27 ELRHLKIKVEELENERNQYEWKL 49 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444443333333333
No 310
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=80.12 E-value=7.8 Score=28.62 Aligned_cols=40 Identities=30% Similarity=0.524 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHh
Q 010847 441 KLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 441 ~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
+|+.++.++++++..++..+.+...++.+-.-++.+|+..
T Consensus 51 eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F 90 (96)
T 1t3j_A 51 HLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENF 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3444445555555555555555555555555555555543
No 311
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=80.10 E-value=12 Score=28.20 Aligned_cols=59 Identities=17% Similarity=0.300 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 422 SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
.+.+.+++..+++..+-+.+++.+++.+.- ..-.++..++..++.+++.+..++++++.
T Consensus 37 k~~i~~ie~~l~EA~ell~qMelE~r~~p~--~~R~~~~~klr~Yk~dL~~lk~elk~~~~ 95 (102)
T 1vcs_A 37 KQMVANVEKQLEEARELLEQMDLEVREIPP--QSRGMYSNRMRSYKQEMGKLETDFKRSRI 95 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCT--TTHHHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455555555555544444444433321 11227788888888888888888876543
No 312
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=79.92 E-value=12 Score=25.78 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=8.9
Q ss_pred HHhhccchHHHHHHHHHHHHHHH
Q 010847 412 DEVNSTHSELSKELSSVQGQLVA 434 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~ 434 (499)
+.+..+.+++.+.+...+++++.
T Consensus 7 ~~l~~E~eel~~klk~~~ee~~~ 29 (71)
T 1uix_A 7 ANLANEKEELNNKLKEAQEQLSR 29 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344443334333333333
No 313
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=79.86 E-value=40 Score=31.58 Aligned_cols=144 Identities=8% Similarity=-0.050 Sum_probs=72.4
Q ss_pred cEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE-CCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 46 DVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW-GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 46 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
.+.++|+.++.-....... ... .+++.. ++++++.|+. +.+.+++..++.....
T Consensus 158 ~i~iwd~~~~~~~~~~~~~-----------------~~V-~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETR-----------------GEV-KDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp EEEEEETTTTEEEEEEECS-----------------SCC-CEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEE
T ss_pred EEEEeECCCCcEEEEeCCC-----------------Cce-EEEEEccCCceEEeccc-------eeEEEEEeccCcceee
Confidence 4788999887765433211 111 122221 4556665542 2377888888765544
Q ss_pred ecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcC
Q 010847 125 ETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGG 203 (499)
Q Consensus 125 ~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG 203 (499)
.+. ..........+..-++..++.++.+... ...++.+|............ ........-.++.+ .++.+++.|+
T Consensus 213 ~~~-~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 213 KTD-FDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp ECC-CCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEE
T ss_pred eec-CCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEc
Confidence 321 1111111112223467777777655432 22466777766655433221 01111112223333 4666778777
Q ss_pred CCCCCCCCcEEEEECCCCce
Q 010847 204 CSHSIFFNDLHVLDLQTNEW 223 (499)
Q Consensus 204 ~~~~~~~~~i~~~d~~~~~W 223 (499)
.+ +.|.+||+.+.+-
T Consensus 289 ~D-----~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 289 ND-----NSIALVKLKDLSM 303 (365)
T ss_dssp TT-----SCEEEEETTTTEE
T ss_pred CC-----CEEEEEECCCCcE
Confidence 65 3589999887653
No 314
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.62 E-value=38 Score=31.19 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=57.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECCCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLETM 170 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 170 (499)
.+.+++.|+.++ .+.+||+.++.-.... .......-.+++.. ++.+++.|+.+ ..+.+||+.+.
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVH---SAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEE---CCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEE---ecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCC
Confidence 455667677433 3899999888764433 11211112222222 46777777754 36999999876
Q ss_pred eeE--EeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 171 TWD--AVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 171 ~W~--~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
+-. .+. + . .......+.+ .++..++.|+ + +.+.+||+.+..
T Consensus 203 ~~~~~~~~--~--~-h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFP--V--D-EEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECC--C--C-TTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSST
T ss_pred CCCccEEe--c--c-CCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCC
Confidence 532 221 1 0 1122223333 3554566665 2 269999987754
No 315
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=79.38 E-value=23 Score=28.52 Aligned_cols=55 Identities=7% Similarity=0.016 Sum_probs=29.0
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
.+..|+.++...+..+.+++.++++..+.++.++....-++.++..++.+++.++
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq 123 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLK 123 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555555555555555555555555444444444333
No 316
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=78.74 E-value=64 Score=33.29 Aligned_cols=66 Identities=14% Similarity=0.037 Sum_probs=32.7
Q ss_pred CcEEEEECCCCee-EEeeecCCCCCCCccceEEE-EcCcEEEEEcCCCCCCCCCcEEEEECCCCceEec
Q 010847 160 NDVHFLDLETMTW-DAVEVTQTPPAPRYDHSAAL-HANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 226 (499)
Q Consensus 160 ~~v~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~-~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 226 (499)
..++++|+.+.+- ..+...............+. ..|+.++++.... ......++++|+.+++...+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR-AQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET-TSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC-CCCeEEEEEEeCCCCcceEE
Confidence 3788999887763 33331000000011112222 3466555444322 12235689999988876554
No 317
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=78.70 E-value=40 Score=30.94 Aligned_cols=157 Identities=12% Similarity=0.055 Sum_probs=81.2
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCC----CCCCcc-eEEEEE-C-CEEEEEcCcCCCCCccCcEEE
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKV----PVARGG-HSVTLV-G-SRLIIFGGEDRSRKLLNDVHF 164 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~----p~~r~~-~~~~~~-~-~~lyv~GG~~~~~~~~~~v~~ 164 (499)
++.||+..++. ...+.+||+....-..+...+.. +..... +.++.. + +.||+.... .+.|.+
T Consensus 154 ~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~------~~~I~~ 222 (329)
T 3fvz_A 154 TGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE------NGRIQC 222 (329)
T ss_dssp TCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT------TTEEEE
T ss_pred CCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC------CCEEEE
Confidence 57899987532 23499999654433333322221 111111 233333 3 789998543 456999
Q ss_pred EECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCC--CCCCCcEEEEECCCCceEecccCCCCCCcCcc-cEE
Q 010847 165 LDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSH--SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAG-HAG 241 (499)
Q Consensus 165 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~--~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~-~~~ 241 (499)
||+.+++....-.. ......-.+++.. .+.+|...|... ....+.+.++|+.+++....- +..+..... +++
T Consensus 223 ~~~~~G~~~~~~~~--~~~~~~~~~~~~~-pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~--~~~~~~~~~p~~i 297 (329)
T 3fvz_A 223 FKTDTKEFVREIKH--ASFGRNVFAISYI-PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF--KPVRKHFDMPHDI 297 (329)
T ss_dssp EETTTCCEEEEECC--TTTTTCEEEEEEE-TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--CCSSSCCSSEEEE
T ss_pred EECCCCcEEEEEec--cccCCCcceeeec-CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--cCCCCccCCeeEE
Confidence 99987766443321 1112112233333 366777766421 223457999998887755431 111111122 233
Q ss_pred EEE-CCEEEEEeCCCCCCCcceEEEEECC
Q 010847 242 ITI-DENWYIVGGGDNNNGCQETIVLNMT 269 (499)
Q Consensus 242 ~~~-~~~l~v~GG~~~~~~~~~~~~~d~~ 269 (499)
++. ++.+||....+ +.+++|++.
T Consensus 298 a~~~dG~lyvad~~~-----~~I~~~~~~ 321 (329)
T 3fvz_A 298 VASEDGTVYIGDAHT-----NTVWKFTLT 321 (329)
T ss_dssp EECTTSEEEEEESSS-----CCEEEEEEE
T ss_pred EECCCCCEEEEECCC-----CEEEEEeCC
Confidence 333 45788876532 257777754
No 318
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=78.44 E-value=45 Score=31.33 Aligned_cols=150 Identities=17% Similarity=0.108 Sum_probs=71.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEE-CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNL--CGVMETSGKVPVARGGHSVTLV-GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
++.+++.|+.++ .+.+||+.... -..+. + .. ... .+++.. ++..++.|+.+. .+.++|+.
T Consensus 217 ~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~--~-h~-~~v-~~v~~~p~~~~l~s~s~D~------~i~lwd~~ 279 (380)
T 3iz6_a 217 NANMFISGSCDT------TVRLWDLRITSRAVRTYH--G-HE-GDI-NSVKFFPDGQRFGTGSDDG------TCRLFDMR 279 (380)
T ss_dssp SCCEEEEEETTS------CEEEEETTTTCCCCEEEC--C-CS-SCC-CEEEECTTSSEEEEECSSS------CEEEEETT
T ss_pred CCCEEEEEECCC------eEEEEECCCCCcceEEEC--C-cC-CCe-EEEEEecCCCeEEEEcCCC------eEEEEECC
Confidence 567888887643 38888876321 11111 1 11 111 122222 456777777543 58899998
Q ss_pred CCeeEEeeecCCC--CCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCc--ccEEEE
Q 010847 169 TMTWDAVEVTQTP--PAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRA--GHAGIT 243 (499)
Q Consensus 169 t~~W~~~~~~~~~--p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~--~~~~~~ 243 (499)
+..-...-..... .........+.+ .++.+++.|+.+ ..+++||+.+..-.... ........ -.+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~l~~ 352 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDCYVWDTLLAEMVLNL--GTLQNSHEGRISCLGL 352 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCEEEEETTTCCEEEEE--CCSCSSCCCCCCEEEE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----CCEEEEECCCCceEEEE--ecccCCCCCceEEEEE
Confidence 8764333211100 001111223333 345466666543 36899998766543210 11111111 112222
Q ss_pred E-CCEEEEEeCCCCCCCcceEEEEECCC
Q 010847 244 I-DENWYIVGGGDNNNGCQETIVLNMTK 270 (499)
Q Consensus 244 ~-~~~l~v~GG~~~~~~~~~~~~~d~~~ 270 (499)
. ++..++.|+.++. +.++++..
T Consensus 353 s~dg~~l~sgs~D~~-----i~iW~~~~ 375 (380)
T 3iz6_a 353 SSDGSALCTGSWDKN-----LKIWAFSG 375 (380)
T ss_dssp CSSSSEEEEECTTSC-----EEEEECCS
T ss_pred CCCCCEEEEeeCCCC-----EEEEecCC
Confidence 2 4567777775543 55555543
No 319
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=78.39 E-value=6.7 Score=31.78 Aligned_cols=42 Identities=10% Similarity=0.002 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQIL 466 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~ 466 (499)
.+.++.+.+..++++++..++++|+..|.-..+.|-++.+++
T Consensus 7 ~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN~~~ 48 (155)
T 2aze_A 7 CQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHA 48 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555666666555554444444444333
No 320
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=78.16 E-value=44 Score=31.16 Aligned_cols=144 Identities=14% Similarity=0.047 Sum_probs=71.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEE-EEE--CCEEEEEcCcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSV-TLV--GSRLIIFGGEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~-~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~ 168 (499)
.+.+||.+.... ..++++++....-.......+.+..+.+..- +.. ++.|++..+ . ..++.||+.
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g~L~~fD~~ 214 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P------RALTAFDVS 214 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S------SSEEEEECS
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C------CeEEEEcCC
Confidence 578999765421 3499999886532221111122334555543 444 346777655 2 358999987
Q ss_pred CCeeEEeeec--CCCCCCCccce---EEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCc---CcccE
Q 010847 169 TMTWDAVEVT--QTPPAPRYDHS---AALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTG---RAGHA 240 (499)
Q Consensus 169 t~~W~~~~~~--~~~p~~r~~~~---~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~---r~~~~ 240 (499)
+-....++.. |.. ....+.. ...+++. ++++.-. .+..+.+-...+ |......+..|.+ ....+
T Consensus 215 ~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~-vllV~~~-----~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt 286 (334)
T 2p9w_A 215 KPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNE-SVLVGAR-----APYAISFRSWDN-WKSANIKKTKRSELQNSGFTA 286 (334)
T ss_dssp SSSCCCEECEESSCC-CCCTTEEEEEEEEETTE-EEEEEEE-----TTEEEEEECSST-TSEEEEEEEECGGGGSSCEEE
T ss_pred CCcceeecccccCCc-ccccCcccccccccCCE-EEEEEcC-----CCCEEEEECCCC-cceeEEeeeecCccccCceeE
Confidence 5322122221 211 0111111 1224444 5444321 134556654444 9886654444432 33333
Q ss_pred EEE----ECCEEEEEeCCC
Q 010847 241 GIT----IDENWYIVGGGD 255 (499)
Q Consensus 241 ~~~----~~~~l~v~GG~~ 255 (499)
.+. .++++|++.+.-
T Consensus 287 ~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 287 VADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEEEETTEEEEEEEECCG
T ss_pred EEEeccccCCeEEEEeeec
Confidence 334 568999998753
No 321
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=77.83 E-value=34 Score=29.69 Aligned_cols=154 Identities=10% Similarity=0.108 Sum_probs=78.4
Q ss_pred eeEEEECCEEEEEcccCCCCCCCceEEEEECCCC-cEEEeecCC---CCCCCCcceEEEE-ECCEEEEEcCcCCCCCccC
Q 010847 86 HCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETN-LCGVMETSG---KVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLN 160 (499)
Q Consensus 86 ~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~g---~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~ 160 (499)
-+++.+.+++|+|=|. .+|+++.... ......... .+|. ...++... .++++|+|=| +
T Consensus 34 DAi~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG--------~ 96 (218)
T 1gen_A 34 DGIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG--------N 96 (218)
T ss_dssp SEEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET--------T
T ss_pred eEEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC--------C
Confidence 3455678999999773 2777765542 222222211 2232 22222222 2579999965 3
Q ss_pred cEEEEECCCCee---EEeeecCCCCCCC-ccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-----cccCC
Q 010847 161 DVHFLDLETMTW---DAVEVTQTPPAPR-YDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIKG 230 (499)
Q Consensus 161 ~v~~yd~~t~~W---~~~~~~~~~p~~r-~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~~ 230 (499)
..|+||..+..- ..+...| .|... .-.++... .++++|+|-| +..|+||..+..-.. +.. .
T Consensus 97 ~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~-~ 167 (218)
T 1gen_A 97 EYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIAD-A 167 (218)
T ss_dssp EEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHH-H
T ss_pred EEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhh-c
Confidence 578888421100 1111112 22211 12233332 4678999987 469999987664221 110 0
Q ss_pred CCCCcCcccEEEEEC--CEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 231 DLVTGRAGHAGITID--ENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 231 ~~p~~r~~~~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
-+..+..-.++.... +.+|+|-| +..|.||..+..
T Consensus 168 w~g~p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 168 WNAIPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSSCCSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred cCCCCCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 011122233555544 78999976 257888876543
No 322
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=77.59 E-value=17 Score=27.45 Aligned_cols=18 Identities=0% Similarity=0.239 Sum_probs=6.9
Q ss_pred hHHHHHHhhccchHHHHH
Q 010847 407 FREKIDEVNSTHSELSKE 424 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~ 424 (499)
++.+++.+..+++.++.+
T Consensus 13 lq~~~~~l~~q~~~l~~~ 30 (107)
T 1fxk_A 13 LQQQAQAISVQKQTVEMQ 30 (107)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 323
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=77.03 E-value=11 Score=27.00 Aligned_cols=12 Identities=8% Similarity=0.260 Sum_probs=4.4
Q ss_pred hHHHHHHHHHHH
Q 010847 455 SSQTIENEVQIL 466 (499)
Q Consensus 455 ~~~~~~~e~~~~ 466 (499)
++..+++++++.
T Consensus 59 ei~~le~~i~rh 70 (84)
T 1gmj_A 59 EIERLQKEIERH 70 (84)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 324
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=76.89 E-value=46 Score=30.64 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=13.5
Q ss_pred cCcEEEEEcCCCCCCCCCcEEEEECC
Q 010847 194 ANRYLIVFGGCSHSIFFNDLHVLDLQ 219 (499)
Q Consensus 194 ~~~~l~v~GG~~~~~~~~~i~~~d~~ 219 (499)
.++.+++.|+.+ ..+.+||+.
T Consensus 223 ~~g~~l~sgs~d-----g~v~iwd~~ 243 (343)
T 2xzm_R 223 PNGKYIATGGKD-----KKLLIWDIL 243 (343)
T ss_dssp TTSSEEEEEETT-----CEEEEEESS
T ss_pred CCCCEEEEEcCC-----CeEEEEECC
Confidence 355566777654 358888874
No 325
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=76.55 E-value=63 Score=32.07 Aligned_cols=180 Identities=9% Similarity=0.013 Sum_probs=81.4
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++..++.|+.+ ..+.+||.....-..+. .... ...++.+ +++.++.|+.+ ..+.+||...
T Consensus 355 ~g~~l~~~~~d------g~v~~~~~~~~~~~~~~---~~~~---~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~ 416 (577)
T 2ymu_A 355 DGQTIASASDD------KTVKLWNRNGQLLQTLT---GHSS---SVRGVAFSPDGQTIASASDD------KTVKLWNRNG 416 (577)
T ss_dssp TSSEEEEEETT------SEEEEEETTCCEEEEEE---CCSS---CEEEEEECTTSSCEEEEETT------SEEEEECTTC
T ss_pred CCCEEEEEeCC------CEEEEEcCCCCEEEEec---CCCC---CeEEEEECCCCCEEEEEeCC------CEEEEEeCCC
Confidence 45556666542 23778886554433333 1111 1122222 45556666543 3577788544
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
..-..+.. .......+.+ .++.+++.|+.+ ..+.+||.....-..+. + ....-.+++.. +++
T Consensus 417 ~~~~~~~~------~~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~--~---~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 417 QLLQTLTG------HSSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTLT--G---HSSSVRGVAFSPDGQ 480 (577)
T ss_dssp CEEEEEEC------CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEEE--C---CSSCEEEEEECTTSC
T ss_pred CEEEEecC------CCCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEEc--C---CCCCEEEEEEcCCCC
Confidence 33333221 1111122233 344466666543 35788887554433331 1 11111222222 456
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
+++.|+.+. .+.++|.....-..+..- ......+....+..+++.|+.++ .+.++|..
T Consensus 481 ~las~~~d~-----~i~iw~~~~~~~~~~~~h---------~~~v~~l~~s~dg~~l~s~~~dg----~v~lwd~~ 538 (577)
T 2ymu_A 481 TIASASDDK-----TVKLWNRNGQLLQTLTGH---------SSSVRGVAFSPDGQTIASASDDK----TVKLWNRN 538 (577)
T ss_dssp EEEEEETTS-----EEEEEETTSCEEEEEECC---------SSCEEEEEECTTSSCEEEEETTS----EEEEECTT
T ss_pred EEEEEeCCC-----EEEEEcCCCCEEEEEeCC---------CCCEEEEEEcCCCCEEEEEECcC----EEEEEeCC
Confidence 666666432 467778654433332211 11222233333223455566654 57777753
No 326
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=76.39 E-value=3.8 Score=38.10 Aligned_cols=23 Identities=9% Similarity=0.173 Sum_probs=8.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIA 447 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~ 447 (499)
++.++..++.++.++++|++++.
T Consensus 28 i~~L~~~l~~~~~~i~~l~~~i~ 50 (323)
T 1lwu_C 28 IQELSEMWRVNQQFVTRLQQQLV 50 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 327
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=76.38 E-value=33 Score=33.48 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=13.8
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHH
Q 010847 454 ESSQTIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 454 ~~~~~~~~e~~~~~~~~~~~~~~~~ 478 (499)
+.+.+.++++..+++++.+-++++.
T Consensus 73 ~dlakY~~~~AeY~~kl~aYe~~~~ 97 (497)
T 3iox_A 73 ADLAKYQKDLADYPVKLKAYEDEQT 97 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334555556666666665555554
No 328
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=76.34 E-value=33 Score=32.99 Aligned_cols=15 Identities=20% Similarity=0.189 Sum_probs=7.6
Q ss_pred hhHHHHHHHHHHHHh
Q 010847 381 TDIDAIKEDKRVLEL 395 (499)
Q Consensus 381 ~~~~~l~~~~~~~~~ 395 (499)
..|.+|+....++..
T Consensus 65 ~rI~kLkn~L~~~s~ 79 (491)
T 1m1j_A 65 QRIDNIRQQLADSQN 79 (491)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 335555555555443
No 329
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=76.31 E-value=14 Score=27.51 Aligned_cols=28 Identities=21% Similarity=0.238 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 010847 419 SELSKELSSVQGQLVAERSRCFKLEAQI 446 (499)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (499)
..+.+++.+++.+...++++...||.++
T Consensus 15 ~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 15 DTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555555554444
No 330
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=75.62 E-value=12 Score=24.07 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 010847 458 TIENEVQILRQQKSAFEQEMER 479 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~~ 479 (499)
+|.+.+.+..+++..+.+++++
T Consensus 27 rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 27 KLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555543
No 331
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=75.15 E-value=66 Score=33.59 Aligned_cols=17 Identities=18% Similarity=0.010 Sum_probs=13.1
Q ss_pred ceEEEEECCCCcEEEee
Q 010847 109 MIVRFIDLETNLCGVME 125 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~ 125 (499)
.++++||+.++....+.
T Consensus 92 ~~~~~~d~~~~~~~~l~ 108 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEE 108 (740)
T ss_dssp EEEEEEETTTTEECCSS
T ss_pred eEEEEEECCCCcEEEcc
Confidence 56899999999765543
No 332
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=75.05 E-value=7.4 Score=22.51 Aligned_cols=25 Identities=8% Similarity=0.272 Sum_probs=12.0
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHH
Q 010847 454 ESSQTIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 454 ~~~~~~~~e~~~~~~~~~~~~~~~~ 478 (499)
++-++|.+++++.+.+...+.++-+
T Consensus 7 ~ENekLhk~ie~KdeeIa~Lk~eN~ 31 (37)
T 1t6f_A 7 KENEKLHKEIEQKDNEIARLKKENK 31 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3334455555555555554444443
No 333
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=74.99 E-value=26 Score=26.84 Aligned_cols=21 Identities=10% Similarity=0.313 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010847 458 TIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~ 478 (499)
++++++..++.++..++..+.
T Consensus 88 ~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 88 ALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444443
No 334
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=74.90 E-value=5.1 Score=22.82 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 456 SQTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 456 ~~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
+.+|+.+.+++..++..++.|..+++
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk 28 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIX 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 44566666677777777777665554
No 335
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=74.88 E-value=5.5 Score=24.86 Aligned_cols=18 Identities=28% Similarity=0.398 Sum_probs=9.0
Q ss_pred HhHHHHHHHHHHHHHhHH
Q 010847 454 ESSQTIENEVQILRQQKS 471 (499)
Q Consensus 454 ~~~~~~~~e~~~~~~~~~ 471 (499)
.++..|++|++.++++++
T Consensus 6 EEILRLErEIE~Lqrqke 23 (51)
T 2lw9_A 6 EEILRLEKEIEDLQRMKE 23 (51)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334445555555555554
No 336
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=74.75 E-value=73 Score=31.91 Aligned_cols=139 Identities=8% Similarity=-0.083 Sum_probs=68.8
Q ss_pred ceEEEEEC--CCCcEEEeecCCCCCCCCcceEEEEEC-CEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 109 MIVRFIDL--ETNLCGVMETSGKVPVARGGHSVTLVG-SRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 109 ~~~~~yd~--~t~~W~~~~~~g~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
..++..++ .... ..+. ..+.. . ..+...+ +.+++..+.. +.+.+||+.+.+-..+... +.
T Consensus 90 ~~l~~~~~~~~g~~-~~l~---~~~~~-~-~~~~s~dg~~~~~~s~~~------~~~~l~d~~~g~~~~l~~~---~~-- 152 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLE---AVKPM-R-ILSGVDTGEAVVFTGATE------DRVALYALDGGGLRELARL---PG-- 152 (582)
T ss_dssp EEEEEEETTSTTCC-EECT---TSCSB-E-EEEEEECSSCEEEEEECS------SCEEEEEEETTEEEEEEEE---SS--
T ss_pred eEEEEEeccCCCcc-cccc---CCCCc-e-eeeeCCCCCeEEEEecCC------CCceEEEccCCcEEEeecC---CC--
Confidence 35777777 4433 2332 22211 1 2233344 4555554432 2344779888887766531 11
Q ss_pred ccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEE
Q 010847 186 YDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETI 264 (499)
Q Consensus 186 ~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~ 264 (499)
...+.-.|+..+++++.... ....++++|+.++.+..+.. . + ......+.. +++.++.+.. .....++
T Consensus 153 --~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~~--~-~--~~~~~~~~SpDG~~l~~~~~---~~~~~i~ 221 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFDS--G-E--GSFSSASISPGMKVTAGLET---AREARLV 221 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCCCEEECC--S-S--CEEEEEEECTTSCEEEEEEC---SSCEEEE
T ss_pred --ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCCceEeec--C-C--CccccceECCCCCEEEEccC---CCeeEEE
Confidence 22222234434554443211 12359999999988877632 1 1 111122222 4444443322 2234789
Q ss_pred EEECCCCceEE
Q 010847 265 VLNMTKLAWSI 275 (499)
Q Consensus 265 ~~d~~~~~W~~ 275 (499)
++|+.++....
T Consensus 222 ~~d~~~~~~~~ 232 (582)
T 3o4h_A 222 TVDPRDGSVED 232 (582)
T ss_dssp EECTTTCCEEE
T ss_pred EEcCCCCcEEE
Confidence 99998887763
No 337
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=74.60 E-value=45 Score=34.50 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=52.7
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCC---CCccCcEEEEECCCCeeEEeeecCCCCCCCc
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRS---RKLLNDVHFLDLETMTWDAVEVTQTPPAPRY 186 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~---~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 186 (499)
.++++|+.+++-..+..............+..-+++.++++..... ......++++|+.+.+-..+..... .....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~ 116 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-SNAKL 116 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-CSCCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-ccccc
Confidence 4888998888765554211110001111122224554444432211 1134689999999887655543111 00001
Q ss_pred cceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEec
Q 010847 187 DHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 226 (499)
Q Consensus 187 ~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 226 (499)
..++.-.++..++|+.. +.++++|+.++....+
T Consensus 117 -~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 117 -QYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp -SBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEE
T ss_pred -cccEECCCCCEEEEEEC------CeEEEEECCCCceEEE
Confidence 11112224434444432 3799999888766554
No 338
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=74.42 E-value=62 Score=31.73 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=38.0
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCC
Q 010847 195 NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKL 271 (499)
Q Consensus 195 ~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 271 (499)
++.+|+|-| +..|+||..+.....-.- +..| . --++....+.+|+|-|. ..|+||..+.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w-~gi~--~-iDAA~~~~g~~YfFkG~-------~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSW-PAVG--N-CTSALRWLGRYYCFQGN-------QFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECC-TTSC--C-CSEEEEETTEEEEEETT-------EEEEECTTTC
T ss_pred CCeEEEEec-------ccEEEEecccceeecccC-CCCC--c-cchheeeCCceEEEECC-------EEEEEcCccC
Confidence 556788887 468999988775543110 1112 2 23555567899999873 5788887554
No 339
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=74.35 E-value=75 Score=33.38 Aligned_cols=142 Identities=11% Similarity=0.011 Sum_probs=69.2
Q ss_pred ceEEEEECCCCcEE--EeecCCCCCCCCcceEEEE-ECC-EEEEEcCcCCCCCccCcEEEEECCCC--ee--EEeeecCC
Q 010847 109 MIVRFIDLETNLCG--VMETSGKVPVARGGHSVTL-VGS-RLIIFGGEDRSRKLLNDVHFLDLETM--TW--DAVEVTQT 180 (499)
Q Consensus 109 ~~~~~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~v~~yd~~t~--~W--~~~~~~~~ 180 (499)
..++..++.+..-. .+- ..+.......... -++ .|++..... ..++++.+|+.+. .+ ..+...
T Consensus 247 ~~v~~~~lgt~~~~~~lv~---~~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~d~~~~~~~~~~~~l~~~-- 317 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLY---EEHNPLFSAFMYKAADTNTLCIGSQSP----ETAEVHLLDLRKGNAHNTLEIVRPR-- 317 (751)
T ss_dssp EEEEEEETTSCGGGCEEEE---ECCCTTCEEEEEECTTSSEEEEEEECS----SCEEEEEEESSSCTTCCCEEESSCC--
T ss_pred CEEEEEECCCCchhcEEEE---ecCCCceEEEEEECCCCCEEEEEecCC----CCceEEEEECCCCCCCceeEEeecC--
Confidence 46888888775421 221 0111122222222 233 555554322 2568999999875 45 554321
Q ss_pred CCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCC-CceEe-cccCCCCCCcCcccEEEEECCEEEEEeCCCCCC
Q 010847 181 PPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQT-NEWSQ-PEIKGDLVTGRAGHAGITIDENWYIVGGGDNNN 258 (499)
Q Consensus 181 ~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~-~~W~~-~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 258 (499)
...+ .+......++.||+....+ ......|+.+|+.+ ..|.. +-. . .. ..........++.+++..-.+
T Consensus 318 ~~~~--~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~-~-~~-~~~l~~~~~~~~~lv~~~~~~--- 388 (751)
T 2xe4_A 318 EKGV--RYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVD-H-SE-DVFMESIAVRSNYLVVAGRRA--- 388 (751)
T ss_dssp CTTC--CEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEEC-C-CS-SEEEEEEEECSSEEEEEEEET---
T ss_pred CCCc--eEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEEC-C-CC-CcEEEEEEEECCEEEEEEEeC---
Confidence 1011 1122113366677776543 12235799999876 57876 421 1 11 111122333456666664322
Q ss_pred CcceEEEEEC
Q 010847 259 GCQETIVLNM 268 (499)
Q Consensus 259 ~~~~~~~~d~ 268 (499)
....++++|+
T Consensus 389 g~~~l~~~dl 398 (751)
T 2xe4_A 389 GLTRIWTMMA 398 (751)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 3457889986
No 340
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=73.98 E-value=5.5 Score=22.74 Aligned_cols=27 Identities=22% Similarity=0.323 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 456 SQTIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 456 ~~~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
+.+|+.+.+++.++++.++.+.++++.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 445666666677777777766665543
No 341
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=73.97 E-value=8 Score=24.90 Aligned_cols=29 Identities=31% Similarity=0.465 Sum_probs=11.1
Q ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHhh
Q 010847 408 REKIDEVNSTHSELSKELSSVQGQLVAER 436 (499)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (499)
+.++..+..+++.+..-+++.++++..++
T Consensus 15 ~~~l~~L~~rN~rL~~~L~~AR~el~~Lk 43 (51)
T 3m91_A 15 EARIDSLAARNSKLMETLKEARQQLLALR 43 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333333333
No 342
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=73.87 E-value=21 Score=26.89 Aligned_cols=11 Identities=0% Similarity=0.274 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q 010847 383 IDAIKEDKRVL 393 (499)
Q Consensus 383 ~~~l~~~~~~~ 393 (499)
++.|+++....
T Consensus 24 ieeLq~Ei~~~ 34 (113)
T 4fi5_A 24 MEELQREINAH 34 (113)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444433
No 343
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=73.82 E-value=52 Score=31.34 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=38.9
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
++.+++.|+.+ ..+.+||+.+.+-...-. .+.......++.+ .++.+++.|+.+ ..+.+||+.+.
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIE---NSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEE---CCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEc---cCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCc
Confidence 36677777653 368999998765432221 1111222233333 355567777654 35899999876
Q ss_pred ceE
Q 010847 222 EWS 224 (499)
Q Consensus 222 ~W~ 224 (499)
...
T Consensus 247 ~~~ 249 (437)
T 3gre_A 247 VLI 249 (437)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 344
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=73.77 E-value=11 Score=24.17 Aligned_cols=9 Identities=22% Similarity=0.231 Sum_probs=3.3
Q ss_pred hhhhHHHHH
Q 010847 437 SRCFKLEAQ 445 (499)
Q Consensus 437 ~~~~~~~~~ 445 (499)
.+++.|+.+
T Consensus 25 ~kv~~Le~~ 33 (58)
T 3a2a_A 25 AKIQHLEFS 33 (58)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 345
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=73.67 E-value=19 Score=34.60 Aligned_cols=18 Identities=11% Similarity=0.182 Sum_probs=7.1
Q ss_pred hhhhhHHHHHHHHHHHHH
Q 010847 436 RSRCFKLEAQIAELQKML 453 (499)
Q Consensus 436 ~~~~~~~~~~~~e~~~~l 453 (499)
.+++.++|..+...+.++
T Consensus 90 l~~~~~~e~~~~~~~~~i 107 (409)
T 1m1j_C 90 IEEIIRYENTILAHENTI 107 (409)
T ss_dssp HHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchHHHH
Confidence 333444444433333333
No 346
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=73.59 E-value=38 Score=31.73 Aligned_cols=10 Identities=10% Similarity=0.285 Sum_probs=4.1
Q ss_pred HhHHHHHHHH
Q 010847 454 ESSQTIENEV 463 (499)
Q Consensus 454 ~~~~~~~~e~ 463 (499)
-++++||..+
T Consensus 148 ~kiqRLE~~I 157 (390)
T 1deq_A 148 VDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHH
Confidence 3333444444
No 347
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=73.20 E-value=6.5 Score=21.01 Aligned_cols=21 Identities=38% Similarity=0.627 Sum_probs=12.4
Q ss_pred HhhhhhhHHHHHHHHHHHHHH
Q 010847 434 AERSRCFKLEAQIAELQKMLE 454 (499)
Q Consensus 434 ~~~~~~~~~~~~~~e~~~~l~ 454 (499)
.++.+|..++.++|.++++|+
T Consensus 5 alekkcaalesklqalekkle 25 (31)
T 3ljm_A 5 ALEKKCAALESKLQALEKKLE 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666655554
No 348
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=73.02 E-value=84 Score=31.82 Aligned_cols=107 Identities=11% Similarity=0.155 Sum_probs=49.3
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCC-Cc
Q 010847 195 NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTK-LA 272 (499)
Q Consensus 195 ~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~-~~ 272 (499)
++.+++.|+.+ +.+.+||+.+.....+...+ ....-.+++.. ++.+++.|+.+. .+.+||..+ ..
T Consensus 459 dg~~lasgs~D-----~~v~lwd~~~~~~~~~~~~~---h~~~v~~v~fspdg~~las~s~d~-----~v~~w~~~~~~~ 525 (611)
T 1nr0_A 459 DKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIV---HPAEITSVAFSNNGAFLVATDQSR-----KVIPYSVANNFE 525 (611)
T ss_dssp TSCEEEEEETT-----SEEEEEEEETTEEEEEEEEE---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEEGGGTTE
T ss_pred CCCEEEEeCCC-----CeEEEEEccCCceeeeeccC---CCCceEEEEECCCCCEEEEEcCCC-----CEEEEEcCCCCc
Confidence 44455555543 35778887766554332100 01111122222 456666665432 367777765 22
Q ss_pred eEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 273 WSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 273 W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
.+.... ...+......+....+..+++.|+.++ .+.++++..
T Consensus 526 --~~~~~~----~~~H~~~V~~v~fspdg~~lasgs~D~----~v~lW~~~~ 567 (611)
T 1nr0_A 526 --LAHTNS----WTFHTAKVACVSWSPDNVRLATGSLDN----SVIVWNMNK 567 (611)
T ss_dssp --ESCCCC----CCCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTC
T ss_pred --eeeeee----eeecccceeEEEECCCCCEEEEEECCC----cEEEEECCC
Confidence 111100 011122233344444334566677665 577788754
No 349
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=72.99 E-value=20 Score=29.95 Aligned_cols=11 Identities=27% Similarity=0.335 Sum_probs=4.1
Q ss_pred HHHHHHHHHhH
Q 010847 460 ENEVQILRQQK 470 (499)
Q Consensus 460 ~~e~~~~~~~~ 470 (499)
.+|+..+++++
T Consensus 119 ~~Ei~~Lr~qL 129 (175)
T 3lay_A 119 AKEMESLGQKL 129 (175)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 350
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=72.72 E-value=35 Score=34.35 Aligned_cols=113 Identities=12% Similarity=-0.017 Sum_probs=60.6
Q ss_pred EECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 90 KWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 90 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
..++.+++..+... .+.+||+.++.-..+.. .+. ...+..-+++.+++++.+... ...++++|+.+
T Consensus 119 ~dg~~~~~~s~~~~------~~~l~d~~~g~~~~l~~---~~~---~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~ 184 (582)
T 3o4h_A 119 DTGEAVVFTGATED------RVALYALDGGGLRELAR---LPG---FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSS 184 (582)
T ss_dssp ECSSCEEEEEECSS------CEEEEEEETTEEEEEEE---ESS---CEEEEEEETTEEEEEEEEETT--EEEEEEEETTT
T ss_pred CCCCeEEEEecCCC------CceEEEccCCcEEEeec---CCC---ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCC
Confidence 33555665554322 24578988888777652 222 222333455555554443221 24599999999
Q ss_pred CeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
..+..+... .-.....+...|+..++.+..++ ...|+++|+.++...
T Consensus 185 g~~~~l~~~-----~~~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 185 GGLRVFDSG-----EGSFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp CCCEEECCS-----SCEEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred CCceEeecC-----CCccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 988876421 11112222333444444333221 246899999888776
No 351
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=72.71 E-value=14 Score=35.72 Aligned_cols=82 Identities=22% Similarity=0.198 Sum_probs=37.4
Q ss_pred hHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Q 010847 397 LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQE 476 (499)
Q Consensus 397 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~ 476 (499)
+...+.+..++++.++..++..+.+++.++..++-.+. +.++. +-.+..-+++.++.++.+.=....++.|++.+...
T Consensus 311 L~~~~~~l~~~~~~~~~k~~~v~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~q~~~~~~~ 388 (406)
T 4dyl_A 311 LTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENTHP-RERVQ-LLGKRQVLQEALQGLQVALCSQAKLQAQQELLQTK 388 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT-TCGGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-chHHH-HHhHHhhHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33333444444444444444444444444333221111 11222 22344445555555555555555556666666666
Q ss_pred HHHh
Q 010847 477 MERA 480 (499)
Q Consensus 477 ~~~~ 480 (499)
++++
T Consensus 389 ~~~~ 392 (406)
T 4dyl_A 389 LEHL 392 (406)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 6543
No 352
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=72.44 E-value=4.4 Score=35.78 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHh
Q 010847 459 IENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 459 ~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
|.+++.++++++..+.+|++++
T Consensus 73 L~~~Lk~ar~El~~LkeElerL 94 (251)
T 3m9b_A 73 LMETLKEARQQLLALREEVDRL 94 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555555555555555544
No 353
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=72.32 E-value=8.1 Score=23.35 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=7.0
Q ss_pred chHHHHHHHHHHHHHHHh
Q 010847 418 HSELSKELSSVQGQLVAE 435 (499)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~ 435 (499)
+.+++..+.-++.+++++
T Consensus 19 naeLEervstLq~EN~mL 36 (42)
T 2oqq_A 19 NSELEERLSTLQNENQML 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHH
Confidence 333333333344444443
No 354
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=72.01 E-value=65 Score=30.09 Aligned_cols=183 Identities=11% Similarity=0.126 Sum_probs=86.4
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 109 MIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 109 ~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
..+.++|+.+..-.... ...... .+++. -++++++.|+. +.+.+++..+......... ......
T Consensus 157 ~~i~iwd~~~~~~~~~~---~~~~~V--~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~---~~~~~~ 221 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEI---ETRGEV--KDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTD---FDKNWS 221 (365)
T ss_dssp CEEEEEETTTTEEEEEE---ECSSCC--CEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECC---CCTTEE
T ss_pred CEEEEeECCCCcEEEEe---CCCCce--EEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeec---CCCCCC
Confidence 34889999988754432 111111 22222 24566666542 3477788777665433221 111111
Q ss_pred c-eEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEE
Q 010847 188 H-SAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETI 264 (499)
Q Consensus 188 ~-~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~ 264 (499)
. +++...++..++.++.++.. ...++.+|+........... ........-.++.+ ++.+++.|+.+. .+.
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~ 294 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASNDN-----SIA 294 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETTS-----CEE
T ss_pred EEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCCC-----EEE
Confidence 2 22333466566666543221 12366667655554332110 00001111122222 556777777543 478
Q ss_pred EEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCC
Q 010847 265 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKP 324 (499)
Q Consensus 265 ~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 324 (499)
+||..+..-.. .+.. .+......+....+..+++-|+.++ .+-++++..
T Consensus 295 iwd~~~~~~~~--~~~~-----gH~~~V~~v~fSpdg~~laS~S~D~----tvrvw~ip~ 343 (365)
T 4h5i_A 295 LVKLKDLSMSK--IFKQ-----AHSFAITEVTISPDSTYVASVSAAN----TIHIIKLPL 343 (365)
T ss_dssp EEETTTTEEEE--EETT-----SSSSCEEEEEECTTSCEEEEEETTS----EEEEEECCT
T ss_pred EEECCCCcEEE--EecC-----cccCCEEEEEECCCCCEEEEEeCCC----eEEEEEcCC
Confidence 89988765322 1110 0112233344444344566677655 677788743
No 355
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=71.26 E-value=35 Score=32.67 Aligned_cols=6 Identities=0% Similarity=0.274 Sum_probs=2.2
Q ss_pred HHHHHH
Q 010847 384 DAIKED 389 (499)
Q Consensus 384 ~~l~~~ 389 (499)
+.|+..
T Consensus 41 ~~L~~~ 46 (411)
T 3ghg_C 41 QSLEDI 46 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 356
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=70.88 E-value=17 Score=33.97 Aligned_cols=17 Identities=6% Similarity=0.192 Sum_probs=7.5
Q ss_pred HHHHHHHhHHHHHHHHH
Q 010847 462 EVQILRQQKSAFEQEME 478 (499)
Q Consensus 462 e~~~~~~~~~~~~~~~~ 478 (499)
+++.++.++++.+.+++
T Consensus 129 ~l~~~~a~l~~a~a~l~ 145 (341)
T 3fpp_A 129 QIGTIDAQIKRNQASLD 145 (341)
T ss_dssp HHHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444444
No 357
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.55 E-value=66 Score=29.60 Aligned_cols=201 Identities=10% Similarity=0.041 Sum_probs=99.7
Q ss_pred ceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcCcCCCCCccCcEE
Q 010847 85 DHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTL-VGSRLIIFGGEDRSRKLLNDVH 163 (499)
Q Consensus 85 ~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~ 163 (499)
..+++..++.+|+.|.. ..+++-+-.-.+|+.+......|.. .+.++. -++.+|+.|... .++
T Consensus 82 ~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~g-------~v~ 145 (327)
T 2xbg_A 82 FNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPGS--PRLIKALGNGSAEMITNVG-------AIY 145 (327)
T ss_dssp EEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCSSC--EEEEEEEETTEEEEEETTC-------CEE
T ss_pred EEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCCCC--eEEEEEECCCCEEEEeCCc-------cEE
Confidence 34445557788887531 1255432234689998632112221 233333 457888877421 244
Q ss_pred EEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECC-CCceEecccCCCCCCcCcccEEE
Q 010847 164 FLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGHAGI 242 (499)
Q Consensus 164 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~ 242 (499)
.-+-.-.+|+.+.. +.+...+.++...++.++++|-. ..+++-+-. ..+|+.+.. +.+...+.++
T Consensus 146 ~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~----~~~~~~~~~~ 211 (327)
T 2xbg_A 146 RTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHNR----TTSRRLHNMG 211 (327)
T ss_dssp EESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEEC----CSSSCEEEEE
T ss_pred EEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECCC----CCCCccceeE
Confidence 43323568998863 22223344444455656666532 245555433 568998732 2334444444
Q ss_pred EE-CCEEEEEeCCCCCCCcceEEEEECC-CCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEE
Q 010847 243 TI-DENWYIVGGGDNNNGCQETIVLNMT-KLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVM 320 (499)
Q Consensus 243 ~~-~~~l~v~GG~~~~~~~~~~~~~d~~-~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 320 (499)
.. ++.+|+++.. + .+++.+.. ..+|+.+...+. +. +.....+.......++++|+.. .+++-
T Consensus 212 ~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~~~~~~~~----~~-~~~~~~v~~~~~~~~~~~g~~g-----~i~~S 275 (327)
T 2xbg_A 212 FTPDGRLWMIVNG-G-----KIAFSDPDNSENWGELLSPLR----RN-SVGFLDLAYRTPNEVWLAGGAG-----ALLCS 275 (327)
T ss_dssp ECTTSCEEEEETT-T-----EEEEEETTEEEEECCCBCTTS----SC-CSCEEEEEESSSSCEEEEESTT-----CEEEE
T ss_pred ECCCCCEEEEeCC-c-----eEEEecCCCCCeeEeccCCcc----cC-CcceEEEEecCCCEEEEEeCCC-----eEEEe
Confidence 43 4577776541 1 24444323 567887643211 01 1122233333334577766532 34443
Q ss_pred ECCCCCCCCCc
Q 010847 321 RLKPRDIPRPK 331 (499)
Q Consensus 321 ~~~~~~W~~~~ 331 (499)
.-...+|....
T Consensus 276 ~DgG~tW~~~~ 286 (327)
T 2xbg_A 276 QDGGQTWQQDV 286 (327)
T ss_dssp SSTTSSCEECG
T ss_pred CCCCcccEEcC
Confidence 33456887654
No 358
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=69.85 E-value=77 Score=30.07 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
++.+....+.++.++..++...++++++|+.
T Consensus 200 ~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~ 230 (373)
T 3hhm_B 200 IQRIMHNYDKLKSRISEIIDSRRRLEEDLKK 230 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444455555444444444444433
No 359
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=69.62 E-value=54 Score=31.51 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=9.8
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHH
Q 010847 432 LVAERSRCFKLEAQIAELQKMLE 454 (499)
Q Consensus 432 ~~~~~~~~~~~~~~~~e~~~~l~ 454 (499)
+.+++..+...+.++++++.++.
T Consensus 93 ~~~~e~~~~~~~~~i~~l~~~~~ 115 (409)
T 1m1j_C 93 IIRYENTILAHENTIQQLTDMHI 115 (409)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcchHHHHHHHHHHHH
Confidence 33333334444444444444443
No 360
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=69.41 E-value=7.9 Score=22.42 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
.+|+.+.+++..++..++.+..++
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RL 27 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARL 27 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHH
Confidence 344444445555555555444433
No 361
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=68.66 E-value=33 Score=25.45 Aligned_cols=8 Identities=25% Similarity=0.422 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 010847 460 ENEVQILR 467 (499)
Q Consensus 460 ~~e~~~~~ 467 (499)
+.++.+++
T Consensus 88 q~KiaeLK 95 (107)
T 2k48_A 88 ETKLGELK 95 (107)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 362
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=67.89 E-value=72 Score=29.00 Aligned_cols=246 Identities=9% Similarity=-0.062 Sum_probs=113.0
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCC---CCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCC
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGL---LEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETN 119 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~---~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 119 (499)
..++.||+.++.+............+ ...+. ...+....-++++.. ++.|||.-.. ..+.+||+.++
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g 111 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKA-FCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-------YHLSVVGSEGG 111 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHH-HHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------TEEEEECTTCE
T ss_pred CeEEEECCCCCceEEEeccccccccc-ccccccchhccccCCCCceEEEcCCCCcEEEEECC-------CCEEEEeCCCC
Confidence 45889999888777654321000000 00000 000000112445555 5789987321 23889998877
Q ss_pred cEEEeecCCC-CCCCCcceEEEEE--CCEEEEEcCcCCC-----------CCccCcEEEEECCCCeeEEeeecCCCCCCC
Q 010847 120 LCGVMETSGK-VPVARGGHSVTLV--GSRLIIFGGEDRS-----------RKLLNDVHFLDLETMTWDAVEVTQTPPAPR 185 (499)
Q Consensus 120 ~W~~~~~~g~-~p~~r~~~~~~~~--~~~lyv~GG~~~~-----------~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 185 (499)
..+.+..... .+..+ -..+++. ++.||+.-..... ......+++||+.+.+...+......|
T Consensus 112 ~~~~~~~~~~~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p--- 187 (322)
T 2fp8_A 112 HATQLATSVDGVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP--- 187 (322)
T ss_dssp ECEEEESEETTEECSC-EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---
T ss_pred EEEEecccCCCCcccc-cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---
Confidence 6665542101 11111 1223332 4678886321100 012356999999888766543211111
Q ss_pred ccceEEEEcC-cEEEEEcCCCCCCCCCcEEEEECCCC---ceEecccCCCCCCcCcccEEEEE-CCEEEEEeCCCCC---
Q 010847 186 YDHSAALHAN-RYLIVFGGCSHSIFFNDLHVLDLQTN---EWSQPEIKGDLVTGRAGHAGITI-DENWYIVGGGDNN--- 257 (499)
Q Consensus 186 ~~~~~~~~~~-~~l~v~GG~~~~~~~~~i~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~--- 257 (499)
..++...+ +.||+.-.. .+.|++|++... ..+.+. ..+. -..++.. ++.+||.......
T Consensus 188 --~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~---~~~g---P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 188 --GGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLV---KIPN---PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp --CEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEE---ECSS---EEEEEECTTSCEEEEEEEETTSST
T ss_pred --cceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEE---eCCC---CCCeEECCCCCEEEEecCcccccc
Confidence 22333334 457775321 257999998753 333321 1111 1223322 3578877542110
Q ss_pred --CCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 258 --NGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 258 --~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
.....+++||+....-..+....+. + ...... +... ...|||.+..+ +.+.+|++..+
T Consensus 255 ~~~~~~~v~~~d~~G~~~~~~~~~~g~-~---~~~~~~-~~~~-~g~L~v~~~~~----~~i~~~~~~~~ 314 (322)
T 2fp8_A 255 HGRVDPKGIKFDEFGNILEVIPLPPPF-A---GEHFEQ-IQEH-DGLLYIGTLFH----GSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEEEECTTSCEEEEEECCTTT-T---TSCCCE-EEEE-TTEEEEECSSC----SEEEEEEC---
T ss_pred cCCCccEEEEECCCCCEEEEEECCCCC-c---cccceE-EEEe-CCEEEEeecCC----CceEEEecccc
Confidence 0124588999875544444332211 0 111111 2223 34677754332 37888887543
No 363
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=67.88 E-value=12 Score=29.00 Aligned_cols=8 Identities=38% Similarity=0.414 Sum_probs=2.9
Q ss_pred hhhHHHHH
Q 010847 438 RCFKLEAQ 445 (499)
Q Consensus 438 ~~~~~~~~ 445 (499)
++..|+.+
T Consensus 48 ~i~~Le~e 55 (120)
T 3i00_A 48 HVSELEAD 55 (120)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 364
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=67.67 E-value=14 Score=35.83 Aligned_cols=21 Identities=5% Similarity=-0.146 Sum_probs=7.8
Q ss_pred HHHhhhhhhHHHHHHHHHHHH
Q 010847 432 LVAERSRCFKLEAQIAELQKM 452 (499)
Q Consensus 432 ~~~~~~~~~~~~~~~~e~~~~ 452 (499)
.++++++.++++.++++++++
T Consensus 19 ~~~l~~~~~~~~~~~~~~~~~ 39 (412)
T 3u06_A 19 TEELLRCNEQQAAELETCKEQ 39 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 365
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=67.38 E-value=1.1e+02 Score=30.92 Aligned_cols=181 Identities=8% Similarity=-0.053 Sum_probs=83.7
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCC--CCC
Q 010847 110 IVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPP--APR 185 (499)
Q Consensus 110 ~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p--~~r 185 (499)
.+..||..+.+....- ......-.++.+ ++.+++.||.+ ..+.++|+.+.+-...-...... ...
T Consensus 171 ~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D------~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGD------GTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp CEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECC------CcEEEEECCCCcEeeeeccccccccccC
Confidence 3777787665432221 111111222333 45677777754 35888998776643321100000 011
Q ss_pred ccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEE
Q 010847 186 YDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETI 264 (499)
Q Consensus 186 ~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 264 (499)
.....+.+ .++..++.|+.+ +.+.++|+.+......-..+ .. .......+..++..++.++.++ .+.
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~s~s~d~-----~i~ 307 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVG-TR-IEDQQLGIIWTKQALVSISANG-----FIN 307 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECC-SS-GGGCEEEEEECSSCEEEEETTC-----CEE
T ss_pred CCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCC-CC-ccceeEEEEEcCCEEEEEeCCC-----cEE
Confidence 11122333 355566777654 46889999887654421111 11 1111222333555566655433 366
Q ss_pred EEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 265 VLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 265 ~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
++|+.+..-... +.+ +......+....+...++.|+.++ .+.++|+...
T Consensus 308 ~~~~~~~~~~~~--~~g------h~~~v~~l~~spdg~~l~s~s~D~----~v~~Wd~~~~ 356 (611)
T 1nr0_A 308 FVNPELGSIDQV--RYG------HNKAITALSSSADGKTLFSADAEG----HINSWDISTG 356 (611)
T ss_dssp EEETTTTEEEEE--ECC------CSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTC
T ss_pred EEeCCCCCcceE--EcC------CCCCEEEEEEeCCCCEEEEEeCCC----cEEEEECCCC
Confidence 778776642221 111 111222333333233455566654 5666776543
No 366
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=67.37 E-value=9.6 Score=21.61 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
.+++.+.+++..++..++.|+.+++
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk 27 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIK 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3556666666666666666665544
No 367
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=66.54 E-value=89 Score=29.54 Aligned_cols=155 Identities=9% Similarity=0.064 Sum_probs=78.2
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCcE--EEeecC-CCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLC--GVMETS-GKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~~-g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 161 (499)
+++.+++++|+|=|. -+|+++.....- ..+... ..+|. ... ++... ++++|+|-|. .
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg~--------~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKDD--------K 246 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEETT--------E
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeCC--------E
Confidence 445678999999763 267776443221 111111 12342 222 22233 7899999662 3
Q ss_pred EEEEECCCCe--e-EEeeecCCCCCCC-ccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-----cccCCC
Q 010847 162 VHFLDLETMT--W-DAVEVTQTPPAPR-YDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIKGD 231 (499)
Q Consensus 162 v~~yd~~t~~--W-~~~~~~~~~p~~r-~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~~~ 231 (499)
+|.|+..... + ..+...| +|... .--++... .++.+|+|-| +..|+||..+.+-.. +.. .-
T Consensus 247 yWr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~-~f 317 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITK-NF 317 (365)
T ss_dssp EEECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHH-HS
T ss_pred EEEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhh-cC
Confidence 5666432211 1 1111111 23211 11223333 3567999977 479999986654222 100 00
Q ss_pred CCCcCcccEEEEE-CCEEEEEeCCCCCCCcceEEEEECCCCceEE
Q 010847 232 LVTGRAGHAGITI-DENWYIVGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 232 ~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
...+..-.++... ++++|+|-| +..|+||..+..-..
T Consensus 318 ~g~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 318 QGIGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TTCCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 0112222344445 788999877 368999988776544
No 368
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=66.29 E-value=11 Score=26.13 Aligned_cols=17 Identities=35% Similarity=0.431 Sum_probs=7.4
Q ss_pred HHHHHHHHhHHHHHHHH
Q 010847 461 NEVQILRQQKSAFEQEM 477 (499)
Q Consensus 461 ~e~~~~~~~~~~~~~~~ 477 (499)
.+.+.|.+++..+..|+
T Consensus 50 ~en~~Lr~~i~~L~~El 66 (70)
T 1gd2_E 50 LENDQLRQKVRQLEEEL 66 (70)
T ss_dssp HHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444444
No 369
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=66.17 E-value=58 Score=28.29 Aligned_cols=104 Identities=15% Similarity=0.106 Sum_probs=54.2
Q ss_pred ECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecC---CCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEEC
Q 010847 91 WGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETS---GKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL 167 (499)
Q Consensus 91 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~ 167 (499)
.++++|+|=|. -+|+++.....+.....+ ..+|. ... ++...++++|+|=| +.+|+|+.
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG--------~~yw~~~~ 88 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD--------TKVYVFLT 88 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET--------TEEEEEEC
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC--------CEEEEEeC
Confidence 37889999763 277776543322111111 12342 222 33335899999955 35888886
Q ss_pred CCC-ee-----EEeee-cCCCCCC--CccceEEE-E-cCcEEEEEcCCCCCCCCCcEEEEECCC
Q 010847 168 ETM-TW-----DAVEV-TQTPPAP--RYDHSAAL-H-ANRYLIVFGGCSHSIFFNDLHVLDLQT 220 (499)
Q Consensus 168 ~t~-~W-----~~~~~-~~~~p~~--r~~~~~~~-~-~~~~l~v~GG~~~~~~~~~i~~~d~~~ 220 (499)
.++ +- +.+.. .| +|.. ...--++. . .++.+|+|-| +..|+||..+
T Consensus 89 ~~~~~~~~gyPk~i~~~~G-~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~ 144 (219)
T 1hxn_A 89 KGGYTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKS 144 (219)
T ss_dssp SSSCEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGG
T ss_pred CCCceecCCCCeehhhccC-CCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCC
Confidence 431 11 11110 12 3332 11122222 2 4677999988 4689999754
No 370
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=66.13 E-value=6.5 Score=22.76 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 010847 458 TIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~ 478 (499)
+|+.+.+++..++..++.|..
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~ 25 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVA 25 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHH
Confidence 344444444444444444443
No 371
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.05 E-value=90 Score=29.45 Aligned_cols=197 Identities=12% Similarity=0.017 Sum_probs=98.4
Q ss_pred EEEEECCC--CcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCC-
Q 010847 111 VRFIDLET--NLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAP- 184 (499)
Q Consensus 111 ~~~yd~~t--~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~- 184 (499)
++.|+... .+|..... .+....-++++.. .+.||+.+..+.. -..++..+-...+|+.+......+..
T Consensus 33 l~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g~~---g~gl~~s~D~G~tW~~~~~~~~~~~~~ 106 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTGHL---GPTVFRSDDGGGNWTEATRPPAFNKAP 106 (394)
T ss_dssp EEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC--C---CEEEEEESSTTSCCEECSBCCCCCCCC
T ss_pred eEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCCCC---CccEEEeCCCCCCceECCccccCCCcc
Confidence 77777655 68998741 1112222334433 3578876532211 12467766667789988642111211
Q ss_pred -C-----ccce-EEEEc----CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCC--------------cCccc
Q 010847 185 -R-----YDHS-AALHA----NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--------------GRAGH 239 (499)
Q Consensus 185 -r-----~~~~-~~~~~----~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--------------~r~~~ 239 (499)
+ ..+. .+.+. .+.||+.+. ..-|++.+-...+|+.+......|. ....+
T Consensus 107 ~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 107 EGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp ----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred cccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 1 0111 12232 455666542 1347888767788998743111111 11223
Q ss_pred EEEEE---CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCC--CCC--CCCCCceEEEEEcCc--eEEEEEcCCC
Q 010847 240 AGITI---DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGR--NPL--ASEGLSVCSAIIEGE--HHLVAFGGYN 310 (499)
Q Consensus 240 ~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~--~p~--~~~~~~~~~~~~~~~--~~l~v~GG~~ 310 (499)
+++.. .+.+|+..+. .-+++.+-...+|+.+...... .|. ...+.....+.++.. +.|++ |..
T Consensus 181 ~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~v-g~~- 252 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQ-QNH- 252 (394)
T ss_dssp EEEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEE-EET-
T ss_pred EEEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEE-EcC-
Confidence 34333 2467765331 1377777778899987532110 111 111233344444432 45665 322
Q ss_pred CCCCceEEEEECCCCCCCCCc
Q 010847 311 GKYNNEVFVMRLKPRDIPRPK 331 (499)
Q Consensus 311 ~~~~~~~~~~~~~~~~W~~~~ 331 (499)
.-+++.+-...+|....
T Consensus 253 ----~gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 253 ----CGIYRMDRREGVWKRIG 269 (394)
T ss_dssp ----TEEEEEETTTTEEECGG
T ss_pred ----CeEEEeCCCCCcceECC
Confidence 24788887788887764
No 372
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=65.98 E-value=23 Score=35.16 Aligned_cols=16 Identities=13% Similarity=0.470 Sum_probs=6.0
Q ss_pred HHHHHHHhHHHHHHHH
Q 010847 462 EVQILRQQKSAFEQEM 477 (499)
Q Consensus 462 e~~~~~~~~~~~~~~~ 477 (499)
++..+.+++.++++++
T Consensus 131 ~i~~l~~~~~~~~~~l 146 (501)
T 1wle_A 131 QLTLLYPKEAQLEEQF 146 (501)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 373
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=65.90 E-value=10 Score=21.63 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 458 TIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
+|+.+.+++..+...++.|..+++.
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4566666666666666666665544
No 374
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=65.88 E-value=73 Score=32.88 Aligned_cols=115 Identities=12% Similarity=0.002 Sum_probs=51.5
Q ss_pred CcEEEEECCCCe---eEEeeecCCC-CCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEE----CCCCceEeccc---
Q 010847 160 NDVHFLDLETMT---WDAVEVTQTP-PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLD----LQTNEWSQPEI--- 228 (499)
Q Consensus 160 ~~v~~yd~~t~~---W~~~~~~~~~-p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d----~~~~~W~~~~~--- 228 (499)
..++++|+.+.+ |..+.....+ .........+...|+.+++.... .......|+.+| +.++++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~ 302 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEeccc
Confidence 378888988765 2233210000 00111112222245655554221 112234699999 77777665431
Q ss_pred -CCCCCCcCccc-EEEE-ECC-EEEEEeCCCCCCCcceEEEEECCCCceEEec
Q 010847 229 -KGDLVTGRAGH-AGIT-IDE-NWYIVGGGDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 229 -~~~~p~~r~~~-~~~~-~~~-~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
..........+ ..+. -++ .+++..... .....++++|+.+.....+.
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~g~~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDK--DGYKHIHYIKDTVENAIQIT 353 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECT--TSCEEEEEESSCSTTCEECS
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEcc--CCceEEEEEECCCCceEecc
Confidence 11111110000 1122 233 444432211 12457999999887766654
No 375
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=65.73 E-value=34 Score=24.46 Aligned_cols=8 Identities=13% Similarity=0.256 Sum_probs=2.8
Q ss_pred HHHhhccc
Q 010847 411 IDEVNSTH 418 (499)
Q Consensus 411 ~~~~~~~~ 418 (499)
+..++.+.
T Consensus 34 l~~l~~e~ 41 (101)
T 1d7m_A 34 LASLESEG 41 (101)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 376
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=65.63 E-value=30 Score=29.13 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=4.7
Q ss_pred hhhhhHHHHHH
Q 010847 403 ENSRFREKIDE 413 (499)
Q Consensus 403 ~~~~l~~~~~~ 413 (499)
+..+|...++.
T Consensus 116 EN~~Lh~~ie~ 126 (209)
T 2wvr_A 116 ENEKLHKEIEQ 126 (209)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444433
No 377
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=65.01 E-value=38 Score=24.79 Aligned_cols=13 Identities=15% Similarity=0.376 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHhH
Q 010847 458 TIENEVQILRQQK 470 (499)
Q Consensus 458 ~~~~e~~~~~~~~ 470 (499)
.++.++.++.+++
T Consensus 56 ~lq~Ki~elkr~l 68 (96)
T 2ic9_A 56 ALETKLGELKREL 68 (96)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 378
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=64.86 E-value=8 Score=22.13 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
.+++.+.+++..++..++.|+.+++
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk 28 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIK 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHH
Confidence 4566666666666666666665554
No 379
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=64.81 E-value=1.6e+02 Score=32.03 Aligned_cols=193 Identities=9% Similarity=0.021 Sum_probs=97.6
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEE
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCG 122 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 122 (499)
.+++++|+.++.-..+.... .....+.+ +++.++++...........++++|+.++.-.
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~-------------------~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~ 93 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNL-------------------GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK 93 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSS-------------------SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred CcEEEEECCCCcEEEeeeCC-------------------CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeE
Confidence 37999999988766664321 11222333 4444444432211111346999999988755
Q ss_pred EeecCCCCCCCC----cceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCc
Q 010847 123 VMETSGKVPVAR----GGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANR 196 (499)
Q Consensus 123 ~~~~~g~~p~~r----~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 196 (499)
.+. ..+... .....+.+ +++|++.+..+........++.+|+.+..-..+.. . +. ..+.... +
T Consensus 94 ~lt---~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~--~~--~~~~~sp-G 162 (1045)
T 1k32_A 94 RIT---YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNL---G--PA--THILFAD-G 162 (1045)
T ss_dssp ECC---CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCS---C--SC--SEEEEET-T
T ss_pred Ecc---cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecC---C--Cc--ceeeeCC-C
Confidence 553 111111 11122333 45666666544332234579999998887655542 1 11 1222223 5
Q ss_pred EEEEEcCCCC---------CCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEE
Q 010847 197 YLIVFGGCSH---------SIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLN 267 (499)
Q Consensus 197 ~l~v~GG~~~---------~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d 267 (499)
+++.|.... ......+|.++.. .....+. + ........+..++.+++.+..+ ....+|.++
T Consensus 163 -~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~-~~~~~l~--~---~~~~v~~~~~s~d~l~~~~~~d---g~~~l~~~~ 232 (1045)
T 1k32_A 163 -RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-GAFKKIV--D---MSTHVSSPVIVGHRIYFITDID---GFGQIYSTD 232 (1045)
T ss_dssp -EEEEEESCSCCTTSTTCCSTTCCEEEEEEET-TEEEEEE--C---CSSCCEEEEEETTEEEEEECTT---SSCEEEEEE
T ss_pred -EEEEeccCCCccccccccCCCcCCEEEECCC-CCeEECc--C---CCCcccceEEeCCEEEEEEecc---CceEEEEEe
Confidence 555553211 1223567776644 5555541 1 1122223344466776665532 234789888
Q ss_pred CCCCceEEec
Q 010847 268 MTKLAWSILT 277 (499)
Q Consensus 268 ~~~~~W~~l~ 277 (499)
+....-..+.
T Consensus 233 ~~g~~~~~l~ 242 (1045)
T 1k32_A 233 LDGKDLRKHT 242 (1045)
T ss_dssp TTSCSCEECC
T ss_pred CCCCcceEec
Confidence 8776655554
No 380
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=64.13 E-value=45 Score=25.27 Aligned_cols=7 Identities=29% Similarity=0.354 Sum_probs=2.5
Q ss_pred HHhHHHH
Q 010847 467 RQQKSAF 473 (499)
Q Consensus 467 ~~~~~~~ 473 (499)
..++..+
T Consensus 84 ~~~i~~l 90 (112)
T 1l8d_A 84 IDRKSEL 90 (112)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 381
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=63.91 E-value=1.1e+02 Score=29.80 Aligned_cols=154 Identities=8% Similarity=0.010 Sum_probs=81.2
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCC---CCCCCCcceEEEE--ECCEEEEEcCcCCCCCccCc
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSG---KVPVARGGHSVTL--VGSRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g---~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~ 161 (499)
+++.+++.+|+|-|.. +|+++.....+.....+. .+|.. .. ++.. .++++|+|=|. .
T Consensus 267 Ai~~~~ge~y~Fkg~~--------~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg~--------~ 328 (450)
T 1su3_A 267 AITTIRGEVMFFKDRF--------YMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKGN--------K 328 (450)
T ss_dssp EEEEETTEEEEEETTE--------EEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEETT--------E
T ss_pred eEEecCCeEEEEeCCE--------EEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeCC--------E
Confidence 4566899999998742 777776555444433321 13322 12 2222 26899999652 4
Q ss_pred EEEEECCCC--ee-EEee-ecCCCCC-C-CccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEe-----cccC-
Q 010847 162 VHFLDLETM--TW-DAVE-VTQTPPA-P-RYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQ-----PEIK- 229 (499)
Q Consensus 162 v~~yd~~t~--~W-~~~~-~~~~~p~-~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~-----~~~~- 229 (499)
+|.|+..+. .+ ..+. ..| .|. + .-..+...-.++++|+|-| +..|+||..+.+-.. +...
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~f 400 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDF 400 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHS
T ss_pred EEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcC
Confidence 677763220 00 1111 112 222 1 1222222223577999987 479999976543221 1100
Q ss_pred CCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEE
Q 010847 230 GDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 230 ~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
+..| ..-.+++..++++|+|-| +..|+||..+..-..
T Consensus 401 pgip--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 401 PGIG--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp TTSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCC--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 1122 222344456889999977 268999987766443
No 382
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=63.75 E-value=86 Score=28.39 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=69.2
Q ss_pred CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 010847 143 GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTN 221 (499)
Q Consensus 143 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~ 221 (499)
++..++.|+.+ ..+.++|+.+++-...-. + .......+.+ .++.+++.|+.+ ..+.+||+...
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~-~----h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~ 139 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFV-G----HKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQ 139 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEE-C----CSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSC
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEc-c----CCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 45666666654 358899998876422211 1 1111222233 355567777654 35788888654
Q ss_pred ceEecccCCCCCCcCcccEEEEE-------CCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEE
Q 010847 222 EWSQPEIKGDLVTGRAGHAGITI-------DENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCS 294 (499)
Q Consensus 222 ~W~~~~~~~~~p~~r~~~~~~~~-------~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~ 294 (499)
.-..+. + ....-..+... ++..++.||.+. .+.++|+.+..-.. .+.. +......
T Consensus 140 ~~~~~~--~---h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~--~~~~------h~~~v~~ 201 (319)
T 3frx_A 140 CLATLL--G---HNDWVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIEA--DFIG------HNSNINT 201 (319)
T ss_dssp EEEEEC--C---CSSCEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEEE--EECC------CCSCEEE
T ss_pred eEEEEe--c---cCCcEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhhe--eecC------CCCcEEE
Confidence 433321 1 00011111111 123555665432 37788887654322 1111 1112233
Q ss_pred EEEcCceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 295 AIIEGEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 295 ~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
+....+..+++.||.++ .+.++|+...
T Consensus 202 ~~~sp~g~~l~s~~~dg----~i~iwd~~~~ 228 (319)
T 3frx_A 202 LTASPDGTLIASAGKDG----EIMLWNLAAK 228 (319)
T ss_dssp EEECTTSSEEEEEETTC----EEEEEETTTT
T ss_pred EEEcCCCCEEEEEeCCC----eEEEEECCCC
Confidence 33433334566677665 5777776543
No 383
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=63.73 E-value=1.7e+02 Score=32.25 Aligned_cols=191 Identities=11% Similarity=0.120 Sum_probs=98.8
Q ss_pred CcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCee-EEeee-cCCCCCCCccceEEEE--cCcEEEEEcCCCCCCC
Q 010847 134 RGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTW-DAVEV-TQTPPAPRYDHSAALH--ANRYLIVFGGCSHSIF 209 (499)
Q Consensus 134 r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~-~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~ 209 (499)
-.++++....+.+ ++|.-+... ....++.|+.....| ..... .+.......+++++.. ++...+++|--. ...
T Consensus 334 q~GfSa~~t~d~~-~~GapG~~~-w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~~ 410 (1095)
T 3k6s_A 334 QEGFSAVFTPDGP-VLGAVGSFT-WSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQH 410 (1095)
T ss_dssp CTTSSEECCTTCC-EEEESCSTT-TTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GGG
T ss_pred cccccceecCCcc-eEcccccCC-ccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-ccc
Confidence 3455555555555 777544332 345677887654433 22211 1122223345555432 233356776332 223
Q ss_pred CCcEEEEECCCCceEeccc-CCCCCCcCcccEEEEEC------CEEEEEeCCCC--CCCcceEEEEECCC--CceEEecc
Q 010847 210 FNDLHVLDLQTNEWSQPEI-KGDLVTGRAGHAGITID------ENWYIVGGGDN--NNGCQETIVLNMTK--LAWSILTS 278 (499)
Q Consensus 210 ~~~i~~~d~~~~~W~~~~~-~~~~p~~r~~~~~~~~~------~~l~v~GG~~~--~~~~~~~~~~d~~~--~~W~~l~~ 278 (499)
...+++|......|..... .+.-....++++++..+ ..++++|.-.. ....-.+|+|.... ..|.....
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~ 490 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV 490 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSS
T ss_pred cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEE
Confidence 4679999988778887542 34445556777777652 25767774211 12234588876543 45764433
Q ss_pred CCCCC--CCCCCCCceEEE-EEcC--ceEEEEEcCCCCCCCceEEEEECCCC-CC
Q 010847 279 VKGRN--PLASEGLSVCSA-IIEG--EHHLVAFGGYNGKYNNEVFVMRLKPR-DI 327 (499)
Q Consensus 279 ~~~~~--p~~~~~~~~~~~-~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~-~W 327 (499)
+.+.. +..++|.+...+ =+++ ..-|+|-..........+|+|.-... .|
T Consensus 491 l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 491 LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCCSCSSCCBTSCEEEEECSSSSSCCEEEEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred eecccCCccccCccceEeecccCCCCCcCEEEeCCcCCCCCCEEEEecCCCCCCc
Confidence 33322 356677766543 2222 22344433232334567888887665 44
No 384
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=63.69 E-value=59 Score=31.54 Aligned_cols=11 Identities=9% Similarity=0.459 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 010847 383 IDAIKEDKRVL 393 (499)
Q Consensus 383 ~~~l~~~~~~~ 393 (499)
++.|+....++
T Consensus 97 l~~Le~~l~~i 107 (461)
T 3ghg_B 97 VDELNNNVEAV 107 (461)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444443333
No 385
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=63.66 E-value=11 Score=24.22 Aligned_cols=25 Identities=36% Similarity=0.344 Sum_probs=10.1
Q ss_pred HHHHHHHhHHHHHHHHHHhhccccc
Q 010847 462 EVQILRQQKSAFEQEMERATSVQTQ 486 (499)
Q Consensus 462 e~~~~~~~~~~~~~~~~~~~~~q~q 486 (499)
+++++..+=...++|.+++++..+|
T Consensus 26 kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 26 KIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444444444444333
No 386
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=63.41 E-value=9.4 Score=33.73 Aligned_cols=29 Identities=17% Similarity=0.267 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKML 453 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 453 (499)
+.+++.++..+..+.++|...++++++++
T Consensus 56 l~eL~~ql~~L~arNe~L~~~Lk~ar~El 84 (251)
T 3m9b_A 56 IHQLEARIDSLAARNSKLMETLKEARQQL 84 (251)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555554444444443
No 387
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=63.23 E-value=41 Score=24.48 Aligned_cols=13 Identities=46% Similarity=0.555 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHhH
Q 010847 458 TIENEVQILRQQK 470 (499)
Q Consensus 458 ~~~~e~~~~~~~~ 470 (499)
+|+.|+..+.+++
T Consensus 71 elqgEI~~Lnq~L 83 (99)
T 3ni0_A 71 ELENEVTKLNQEL 83 (99)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 388
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=63.15 E-value=38 Score=24.09 Aligned_cols=6 Identities=0% Similarity=0.440 Sum_probs=2.3
Q ss_pred hhhHHH
Q 010847 405 SRFREK 410 (499)
Q Consensus 405 ~~l~~~ 410 (499)
.+|...
T Consensus 41 ~~Lh~~ 46 (83)
T 1wlq_A 41 EKLHKE 46 (83)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 389
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=62.96 E-value=1.2e+02 Score=29.90 Aligned_cols=180 Identities=9% Similarity=0.014 Sum_probs=81.6
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLET 169 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 169 (499)
++..++.|+.++ .+.++|.....-..+. ... ....++.+ ++..++.|+.+ ..+.+||...
T Consensus 314 ~~~~l~t~~~d~------~i~~w~~~~~~~~~~~---~~~---~~v~~~~~s~~g~~l~~~~~d------g~v~~~~~~~ 375 (577)
T 2ymu_A 314 DGQTIASASDDK------TVKLWNRNGQHLQTLT---GHS---SSVWGVAFSPDGQTIASASDD------KTVKLWNRNG 375 (577)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEEC---CCS---SCEEEEEECTTSSEEEEEETT------SEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeEEEe---CCC---CCEEEEEECCCCCEEEEEeCC------CEEEEEcCCC
Confidence 345555555432 3777887666544432 111 11122222 45566666543 2477788655
Q ss_pred CeeEEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCcccEEEEE-CCE
Q 010847 170 MTWDAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGHAGITI-DEN 247 (499)
Q Consensus 170 ~~W~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 247 (499)
..-..+.. .......+.+ .++..++.|+.+ ..+.+||.....-..+. + .. ..-.+++.. ++.
T Consensus 376 ~~~~~~~~------~~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~--~--~~-~~v~~~~~s~d~~ 439 (577)
T 2ymu_A 376 QLLQTLTG------HSSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLT--G--HS-SSVWGVAFSPDDQ 439 (577)
T ss_dssp CEEEEEEC------CSSCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEEEE--C--CS-SCEEEEEECTTSS
T ss_pred CEEEEecC------CCCCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEec--C--CC-CCeEEEEECCCCC
Confidence 44433331 1111222333 344456666543 35778875443332221 1 00 111122222 456
Q ss_pred EEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCCCCCceEEEEECC
Q 010847 248 WYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLK 323 (499)
Q Consensus 248 l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 323 (499)
+++.++.+. .+.+||.....-..+.... .....+....+..+++.|+.++ .+.++|..
T Consensus 440 ~l~~~~~d~-----~v~~w~~~~~~~~~~~~~~---------~~v~~~~~spd~~~las~~~d~----~i~iw~~~ 497 (577)
T 2ymu_A 440 TIASASDDK-----TVKLWNRNGQLLQTLTGHS---------SSVRGVAFSPDGQTIASASDDK----TVKLWNRN 497 (577)
T ss_dssp EEEEEETTS-----EEEEEETTSCEEEEEECCS---------SCEEEEEECTTSCEEEEEETTS----EEEEEETT
T ss_pred EEEEEcCCC-----EEEEEECCCCEEEEEcCCC---------CCEEEEEEcCCCCEEEEEeCCC----EEEEEcCC
Confidence 666666432 4677887655444332211 1122233333334555566544 56666653
No 390
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=62.94 E-value=79 Score=27.71 Aligned_cols=156 Identities=8% Similarity=-0.039 Sum_probs=84.5
Q ss_pred eeEEEE--CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCc
Q 010847 86 HCMVKW--GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLND 161 (499)
Q Consensus 86 ~s~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 161 (499)
+.++.. ++.||+.-.. .+.+.++++....-..+...+ +..| ..+++. +++||+..... ..+.
T Consensus 82 ~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~-~~~P---~~i~vd~~~g~lyv~~~~~----~~~~ 147 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTG-LVNP---RGIVTDPVRGNLYWTDWNR----DNPK 147 (267)
T ss_dssp EEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSS-CSSE---EEEEEETTTTEEEEEECCS----SSCE
T ss_pred cEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEEECC-CCCc---cEEEEeeCCCEEEEEECCC----CCcE
Confidence 444444 5789987542 345999998765433333211 1111 233333 57899875321 1356
Q ss_pred EEEEECCCCeeEEeeecCCCCCCCccceEEEE-c-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcCccc
Q 010847 162 VHFLDLETMTWDAVEVTQTPPAPRYDHSAALH-A-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGRAGH 239 (499)
Q Consensus 162 v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r~~~ 239 (499)
++++++....-..+... .........+ . +++||+.-.. .+.|++||+.+..-..+.. ....| +
T Consensus 148 I~~~~~dg~~~~~~~~~-----~~~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~--~~~~P---~ 212 (267)
T 1npe_A 148 IETSHMDGTNRRILAQD-----NLGLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLE--GLQYP---F 212 (267)
T ss_dssp EEEEETTSCCCEEEECT-----TCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEE--CCCSE---E
T ss_pred EEEEecCCCCcEEEEEC-----CCCCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEec--CCCCc---e
Confidence 88888865433333211 1122233333 2 4678886432 3679999987643322211 11122 3
Q ss_pred EEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEE
Q 010847 240 AGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSI 275 (499)
Q Consensus 240 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~ 275 (499)
+++..++.+|+.-.. .+.++++|+.+++-..
T Consensus 213 gi~~d~~~lyva~~~-----~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 213 AVTSYGKNLYYTDWK-----TNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEEEETTEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred EEEEeCCEEEEEECC-----CCeEEEEeCCCCCceE
Confidence 455567889987532 2468999998876543
No 391
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=62.94 E-value=10 Score=25.76 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=23.9
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 010847 430 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQ 469 (499)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~ 469 (499)
+.+.++.....+.++...+++++|.-+...++|++.+...
T Consensus 12 ekI~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~ELe~~L~~ 51 (64)
T 3t97_C 12 EKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSP 51 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555566666666777777766666666555443
No 392
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=62.83 E-value=13 Score=21.05 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
.+|+.+.+++..++..++.|..+++
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3556666666666666666655443
No 393
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=61.86 E-value=9.8 Score=21.72 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
.+|+.+.+++...+..++.+..+++
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~ 28 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4556666666666666666655443
No 394
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=61.81 E-value=39 Score=23.77 Aligned_cols=10 Identities=20% Similarity=0.481 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 010847 459 IENEVQILRQ 468 (499)
Q Consensus 459 ~~~e~~~~~~ 468 (499)
++.++.++.+
T Consensus 57 lq~Ki~elkr 66 (78)
T 2ic6_A 57 LETKLGELKR 66 (78)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 395
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=61.19 E-value=64 Score=26.06 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHhHH
Q 010847 458 TIENEVQILRQQKS 471 (499)
Q Consensus 458 ~~~~e~~~~~~~~~ 471 (499)
++.+.+.++.++++
T Consensus 88 ~r~e~k~~l~~ql~ 101 (150)
T 4dci_A 88 ELEEQKRNLLQQQA 101 (150)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444444444
No 396
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=60.80 E-value=38 Score=23.37 Aligned_cols=27 Identities=11% Similarity=0.325 Sum_probs=11.1
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHH
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLV 433 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (499)
|+..++....+.+++.+.+...+++++
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~ 30 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYK 30 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444433333
No 397
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=60.75 E-value=1.1e+02 Score=28.44 Aligned_cols=16 Identities=6% Similarity=-0.205 Sum_probs=11.3
Q ss_pred CcEEEEEcC-CCceEEe
Q 010847 45 SDVQVFDLR-SLAWSNL 60 (499)
Q Consensus 45 ~~~~~yd~~-t~~W~~~ 60 (499)
+.+.+||+. +++...+
T Consensus 167 ~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 167 NKLWTHRKLASGEVELV 183 (365)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEECCCCCEEEe
Confidence 468888887 7776544
No 398
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=60.62 E-value=2e+02 Score=31.69 Aligned_cols=185 Identities=13% Similarity=0.089 Sum_probs=99.9
Q ss_pred cceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeec--CCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCc
Q 010847 84 SDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMET--SGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKL 158 (499)
Q Consensus 84 ~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~ 158 (499)
.|+++....+.+ ++|.-..... ...++.|+.....|-...+ .+.+.....|+++++. +...|++|--.. ..
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w-~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~--~~ 410 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTW-SGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRY--QH 410 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTT-TBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTG--GG
T ss_pred ccccceecCCcc-eEcccccCCc-cceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcccc--cc
Confidence 566666665655 6765433222 4458888766554432221 1233444556776653 234566663221 12
Q ss_pred cCcEEEEECCCCeeEEeee-cCCCCCCCccceEEEEc---C--cEEEEEcCCCC--CCCCCcEEEEECCC--CceEeccc
Q 010847 159 LNDVHFLDLETMTWDAVEV-TQTPPAPRYDHSAALHA---N--RYLIVFGGCSH--SIFFNDLHVLDLQT--NEWSQPEI 228 (499)
Q Consensus 159 ~~~v~~yd~~t~~W~~~~~-~~~~p~~r~~~~~~~~~---~--~~l~v~GG~~~--~~~~~~i~~~d~~~--~~W~~~~~ 228 (499)
...+++|......|..... .|.-.....+++++..+ | .-++++|.-.. ......+|+|.... ..|.....
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~ 490 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV 490 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSS
T ss_pred cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEE
Confidence 4579999988778877553 34444456677776642 1 23667774321 23345789986544 34765322
Q ss_pred -CCCC--CCcCcccEEEEECC-------EEEEEeCCCCCCCcceEEEEECCCC-ce
Q 010847 229 -KGDL--VTGRAGHAGITIDE-------NWYIVGGGDNNNGCQETIVLNMTKL-AW 273 (499)
Q Consensus 229 -~~~~--p~~r~~~~~~~~~~-------~l~v~GG~~~~~~~~~~~~~d~~~~-~W 273 (499)
.+.. +..+++++++.++| .+ ++|.-........+|+|.-... .|
T Consensus 491 l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 491 LYGEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred eecccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 1221 45788888887632 35 4443222223346888876654 44
No 399
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=60.61 E-value=19 Score=26.19 Aligned_cols=45 Identities=9% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 412 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
+.......+.+.+...++.+++.++.+++.|+.++..+..-+.++
T Consensus 32 ~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 32 DKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
No 400
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=59.92 E-value=46 Score=25.05 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=8.0
Q ss_pred hHHHHHHHHHHHHHhHH
Q 010847 455 SSQTIENEVQILRQQKS 471 (499)
Q Consensus 455 ~~~~~~~e~~~~~~~~~ 471 (499)
.+..++.++.++++++.
T Consensus 70 ~Vs~lq~KiaeLKrqLA 86 (113)
T 4fi5_A 70 VAVSIQAKIDELKRQLA 86 (113)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344555555554444
No 401
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=59.83 E-value=69 Score=25.99 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=27.1
Q ss_pred hccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH
Q 010847 415 NSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
-.+.++..+-++..-..+...+.+...++.++..++++|.+++
T Consensus 102 L~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L~ 144 (201)
T 3u0c_A 102 LSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELD 144 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3334444444444445555557777788888888888887776
No 402
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=59.34 E-value=15 Score=20.98 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 457 QTIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
.+++.+.+++..++..++.|+.+++.
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35566666666666666666655543
No 403
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=59.11 E-value=52 Score=31.52 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=12.8
Q ss_pred HHHHHHHHHhhhHHHHHhhhhhHHHHHHh
Q 010847 386 IKEDKRVLELSLTEVRTENSRFREKIDEV 414 (499)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 414 (499)
.+...++++..+.+..+......+.+..+
T Consensus 36 V~~~l~~L~~~l~~isn~Ts~~~~~v~~i 64 (411)
T 3ghg_C 36 VDKDLQSLEDILHQVENKTSEVKQLIKAI 64 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 34444455544444444444444434433
No 404
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=59.06 E-value=50 Score=24.18 Aligned_cols=14 Identities=36% Similarity=0.563 Sum_probs=5.8
Q ss_pred hHHHHHHHHHHHHH
Q 010847 440 FKLEAQIAELQKML 453 (499)
Q Consensus 440 ~~~~~~~~e~~~~l 453 (499)
.-++.++.|++++|
T Consensus 55 ~~lq~Ki~elkr~l 68 (96)
T 2ic9_A 55 SALETKLGELKREL 68 (96)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444443
No 405
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=58.99 E-value=97 Score=30.70 Aligned_cols=8 Identities=25% Similarity=0.272 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 010847 445 QIAELQKM 452 (499)
Q Consensus 445 ~~~e~~~~ 452 (499)
+.+++.++
T Consensus 124 ~~~~l~~~ 131 (501)
T 1wle_A 124 RGREIRKQ 131 (501)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 406
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=58.88 E-value=25 Score=33.25 Aligned_cols=19 Identities=5% Similarity=0.232 Sum_probs=8.2
Q ss_pred HHHHHHHHHHhHHHHHHHH
Q 010847 459 IENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 459 ~~~e~~~~~~~~~~~~~~~ 477 (499)
++.++++++.+++..+..+
T Consensus 134 ~~~~l~~~~~~l~~a~~~l 152 (369)
T 4dk0_A 134 VQENIKQAEIEVNTAETNL 152 (369)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3344444444444444333
No 407
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=58.44 E-value=51 Score=24.02 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=5.2
Q ss_pred HHHHHHHHHHH
Q 010847 383 IDAIKEDKRVL 393 (499)
Q Consensus 383 ~~~l~~~~~~~ 393 (499)
+..++..++.+
T Consensus 23 v~~lKq~RRtl 33 (90)
T 2wt7_B 23 VIRLKQKRRTL 33 (90)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 44445554444
No 408
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=57.80 E-value=18 Score=20.71 Aligned_cols=24 Identities=8% Similarity=0.220 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh
Q 010847 457 QTIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 457 ~~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
.+++.+.+++..++..++.|+.++
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl 27 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARV 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345555555555555555555443
No 409
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=57.63 E-value=33 Score=21.59 Aligned_cols=28 Identities=18% Similarity=0.342 Sum_probs=12.1
Q ss_pred HHHHhhccchHHHHHHHHHHHHHHHhhh
Q 010847 410 KIDEVNSTHSELSKELSSVQGQLVAERS 437 (499)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (499)
+++.++.++.-+.+|++.--.++.+++.
T Consensus 11 QVe~Lk~ENshLrrEL~dNS~~lskLE~ 38 (54)
T 1deb_A 11 QVEALKMENSNLRQELEDNSNHLTKLET 38 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHhhHHHHHHHHh
Confidence 3344444444444444444444444333
No 410
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=56.30 E-value=23 Score=34.98 Aligned_cols=12 Identities=25% Similarity=0.152 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHH
Q 010847 442 LEAQIAELQKML 453 (499)
Q Consensus 442 ~~~~~~e~~~~l 453 (499)
+..+..++.+++
T Consensus 76 l~~~~~~l~~~i 87 (485)
T 3qne_A 76 LIAEKEKLSNEK 87 (485)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 411
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=56.29 E-value=15 Score=27.82 Aligned_cols=32 Identities=13% Similarity=0.047 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 425 LSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
++.++.+++.+.++++.|.+.+..++++|+.+
T Consensus 8 ~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~l 39 (106)
T 2aze_B 8 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLL 39 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444433
No 412
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=56.03 E-value=75 Score=25.25 Aligned_cols=39 Identities=23% Similarity=0.346 Sum_probs=23.4
Q ss_pred HHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHH
Q 010847 390 KRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSV 428 (499)
Q Consensus 390 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 428 (499)
++..+........+-..|..+++.+..+..++..+|..+
T Consensus 47 R~rYK~~F~~dy~EYk~Lhaev~~v~~~F~~Ld~~L~~l 85 (140)
T 1xaw_A 47 RQLYKRNFDTGLQEYKSLQSVLDEINKELSRLDKELDDY 85 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344444455555566677777777766666666665543
No 413
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=55.66 E-value=60 Score=24.00 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=41.4
Q ss_pred hhhHHHHHHhhccc-hHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH--HHHHHhHHHHHHHHHHHHHhHHH-HHHHHHHh
Q 010847 405 SRFREKIDEVNSTH-SELSKELSSVQGQLVAERSRCFKLEAQIAEL--QKMLESSQTIENEVQILRQQKSA-FEQEMERA 480 (499)
Q Consensus 405 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~l~~~~~~~~e~~~~~~~~~~-~~~~~~~~ 480 (499)
..++..+..+.... ++....+.+++..++...+-+.+++.+++.+ --. .-.++..++..++..+.. +.++++++
T Consensus 15 ~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~~p~~--~R~~~~~klr~Yk~dl~~~lk~~lk~l 92 (97)
T 3onj_A 15 EQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDAS--ERATYKAKLREWKKTIQSDIKRPLQSL 92 (97)
T ss_dssp HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444443222 2333334555555555555555555555444 111 113778888888888888 88887765
Q ss_pred h
Q 010847 481 T 481 (499)
Q Consensus 481 ~ 481 (499)
.
T Consensus 93 ~ 93 (97)
T 3onj_A 93 V 93 (97)
T ss_dssp H
T ss_pred h
Confidence 4
No 414
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=55.29 E-value=32 Score=33.44 Aligned_cols=14 Identities=43% Similarity=0.292 Sum_probs=5.2
Q ss_pred HHHHHHHhHHHHHH
Q 010847 462 EVQILRQQKSAFEQ 475 (499)
Q Consensus 462 e~~~~~~~~~~~~~ 475 (499)
++.++.+|++..++
T Consensus 282 ~~~~~~~~~~~~~~ 295 (426)
T 1lrz_A 282 KRDNLQQQLDANEQ 295 (426)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 415
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=54.93 E-value=10 Score=34.05 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=19.3
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 010847 436 RSRCFKLEAQIAELQKMLESSQTIENEVQILRQQ 469 (499)
Q Consensus 436 ~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~ 469 (499)
+++.++|++++.++++++.+++++++|.++|++.
T Consensus 25 ~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~l 58 (255)
T 2j5u_A 25 YTENQHLKERLEELAQLESEVADLKKENKDLKES 58 (255)
T ss_dssp -CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455556666666666666666666655543
No 416
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=54.82 E-value=32 Score=23.80 Aligned_cols=20 Identities=25% Similarity=0.135 Sum_probs=8.6
Q ss_pred HHHHHHHHHhhhhhhHHHHH
Q 010847 426 SSVQGQLVAERSRCFKLEAQ 445 (499)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~ 445 (499)
+.+..+++.++..+..|..+
T Consensus 46 ~~l~~en~~Lr~~i~~L~~E 65 (70)
T 1gd2_E 46 SSTTLENDQLRQKVRQLEEE 65 (70)
T ss_dssp HHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444433
No 417
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=54.79 E-value=1.5e+02 Score=28.27 Aligned_cols=202 Identities=10% Similarity=0.006 Sum_probs=100.6
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
.||+.... -..+.+||+.++.-..+..... .++ .+....++.||+...... ..
T Consensus 143 ~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~---------------~~~--ia~~~~g~~l~~~d~~~~-----~~ 195 (409)
T 3hrp_A 143 TVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK---------------GGK--PAVTKDKQRVYSIGWEGT-----HT 195 (409)
T ss_dssp EEEEEETT-----TTEEEEEETTTTEEEEEEETCC---------------BCB--CEECTTSSEEEEEBSSTT-----CE
T ss_pred CEEEEecC-----CCcEEEEECCCCEEEEeeccCC---------------CCc--eeEecCCCcEEEEecCCC-----ce
Confidence 66766542 2358899999887776654321 111 222222456666543211 15
Q ss_pred EEEEECCCCcE-EEeecCCCCCCCCcceEEEEE--CCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecCCCCCCCcc
Q 010847 111 VRFIDLETNLC-GVMETSGKVPVARGGHSVTLV--GSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYD 187 (499)
Q Consensus 111 ~~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 187 (499)
++.+|+.++.- ..+.... .+....-+++++. ++.||+.-. ...++.||+.+.....+...+........
T Consensus 196 I~~~d~~~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEEGGGTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred EEEEEcCCCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 99999876532 2331110 1011112233333 578888421 23699999988775555322111112222
Q ss_pred -c-eEEEEc-CcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCC--------cC-cccEEEEE--CCEEEEEeC
Q 010847 188 -H-SAALHA-NRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVT--------GR-AGHAGITI--DENWYIVGG 253 (499)
Q Consensus 188 -~-~~~~~~-~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~--------~r-~~~~~~~~--~~~l~v~GG 253 (499)
+ .++... ++.||+.... .+.|++|++... ...+......+. .+ .....+.+ ++.+||.-.
T Consensus 268 P~~~ia~~p~~g~lyv~d~~-----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQN-----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp SCCEEEEETTTTEEEEEETT-----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred ccccEEEeCCCCEEEEEeCC-----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 1 455554 5778886432 357999987654 222211110000 01 11222333 356888743
Q ss_pred CCCCCCcceEEEEECCCCceEEec
Q 010847 254 GDNNNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 254 ~~~~~~~~~~~~~d~~~~~W~~l~ 277 (499)
. ..+.+.++|+.++....+.
T Consensus 342 ~----~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 342 F----KGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp T----TTCEEEEEETTTTEEEEEE
T ss_pred C----CCCEEEEEECCCCEEEEEe
Confidence 0 1236889997777665553
No 418
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.63 E-value=1.4e+02 Score=28.03 Aligned_cols=163 Identities=11% Similarity=0.049 Sum_probs=81.5
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCC--------------CCcceEEEEE---CCEEEEEcCcCC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPV--------------ARGGHSVTLV---GSRLIIFGGEDR 154 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~--------------~r~~~~~~~~---~~~lyv~GG~~~ 154 (499)
.+.||+.+. ...+++.+-...+|+.+......|. ...-++++.. .+.||+..+.
T Consensus 128 ~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-- 198 (394)
T 3b7f_A 128 PGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-- 198 (394)
T ss_dssp TTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET--
T ss_pred CCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC--
Confidence 466776542 1238888777889998753111121 1112233332 2467765321
Q ss_pred CCCccCcEEEEECCCCeeEEeeec---CCCCCC-----CccceEEEEcC--cEEEEEcCCCCCCCCCcEEEEECCCCceE
Q 010847 155 SRKLLNDVHFLDLETMTWDAVEVT---QTPPAP-----RYDHSAALHAN--RYLIVFGGCSHSIFFNDLHVLDLQTNEWS 224 (499)
Q Consensus 155 ~~~~~~~v~~yd~~t~~W~~~~~~---~~~p~~-----r~~~~~~~~~~--~~l~v~GG~~~~~~~~~i~~~d~~~~~W~ 224 (499)
..+++.+-...+|+.+... ..+|.+ ...+.++.... +.||+..+ ..|++.+-...+|+
T Consensus 199 -----ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~ 266 (394)
T 3b7f_A 199 -----GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWK 266 (394)
T ss_dssp -----BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEE
T ss_pred -----CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcce
Confidence 2377776677889887531 011211 12334443332 65666322 34888888888999
Q ss_pred ecccCCCCCCc--CcccEEEEE---CCEEEEEeCCCC-------CCCcceEEEEECCCCceEEec
Q 010847 225 QPEIKGDLVTG--RAGHAGITI---DENWYIVGGGDN-------NNGCQETIVLNMTKLAWSILT 277 (499)
Q Consensus 225 ~~~~~~~~p~~--r~~~~~~~~---~~~l~v~GG~~~-------~~~~~~~~~~d~~~~~W~~l~ 277 (499)
.+.. .+|.. .+.++++.. .+.+|+...... ......+++-.-.-.+|+.+.
T Consensus 267 ~~~~--~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 267 RIGD--AMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp CGGG--GSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred ECCC--CCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 9853 23321 233333332 356777531110 011123443333346899875
No 419
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=54.19 E-value=86 Score=25.39 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHH
Q 010847 442 LEAQIAELQKMLESSQTIENEV 463 (499)
Q Consensus 442 ~~~~~~e~~~~l~~~~~~~~e~ 463 (499)
.+..+.+-++++.++..+.+++
T Consensus 119 ~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 119 KEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444433333
No 420
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=54.08 E-value=84 Score=27.37 Aligned_cols=14 Identities=21% Similarity=0.181 Sum_probs=5.1
Q ss_pred hHHHHHHHHHHHHH
Q 010847 440 FKLEAQIAELQKML 453 (499)
Q Consensus 440 ~~~~~~~~e~~~~l 453 (499)
..+|+...+++..|
T Consensus 201 A~lEqdEl~LE~eL 214 (242)
T 3uux_B 201 ANIEQNQLLLEDNL 214 (242)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHH
Confidence 33333333333333
No 421
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=53.85 E-value=25 Score=23.77 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 010847 458 TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~ 477 (499)
++.+++..+..+++.+.+++
T Consensus 36 KL~Rk~DKl~~ele~l~~~l 55 (65)
T 3sja_C 36 KNNRKLDSLDKEINNLKDEI 55 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 44444444444444444433
No 422
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=53.65 E-value=59 Score=23.30 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHHHh
Q 010847 424 ELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~-~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
+++.++.+...++..+.+++......-++.+..- .++.+++++.+..+...++-+++
T Consensus 2 el~~l~~~~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~L 59 (84)
T 1gk4_A 2 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDL 59 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 423
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=53.53 E-value=1.6e+02 Score=28.32 Aligned_cols=61 Identities=11% Similarity=0.163 Sum_probs=27.0
Q ss_pred hHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH
Q 010847 397 LTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ 457 (499)
Q Consensus 397 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~ 457 (499)
+...+.+...+...++..+.+......+.+..++.+....+.-..++..+.++.++..+.+
T Consensus 358 lddArNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a~~kek~~~~n~~a~~~~KiAE~K 418 (602)
T 1cii_A 358 LLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEK 418 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 3334444444444455444444444444444444444433333334444444444433333
No 424
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=53.51 E-value=1e+02 Score=26.07 Aligned_cols=150 Identities=15% Similarity=0.128 Sum_probs=72.6
Q ss_pred EEEECCEEEEEcCcCCCCCccCcEEEEECCC---CeeEEeeec-CCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEE
Q 010847 139 VTLVGSRLIIFGGEDRSRKLLNDVHFLDLET---MTWDAVEVT-QTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLH 214 (499)
Q Consensus 139 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t---~~W~~~~~~-~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~ 214 (499)
++.+++.+|+|-|. .+|.++... +-=..+... ..+|.... ++....++.+|+|-| +..|
T Consensus 11 ~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~~iD--Aa~~~~~g~~yfFkg-------~~yw 73 (196)
T 3c7x_A 11 VAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPASIN--TAYERKDGKFVFFKG-------DKHW 73 (196)
T ss_dssp EEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCSSCC--EEEECTTSCEEEEET-------TEEE
T ss_pred EEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCCCcc--EEEEeCCCcEEEecC-------CEEE
Confidence 44678999999663 366665321 000111111 13444322 222224566899877 4689
Q ss_pred EEECCCCce---EecccCC-CCCCcCcccEEEEE--CCEEEEEeCCCCCCCcceEEEEECCCCceE-----EeccCCCCC
Q 010847 215 VLDLQTNEW---SQPEIKG-DLVTGRAGHAGITI--DENWYIVGGGDNNNGCQETIVLNMTKLAWS-----ILTSVKGRN 283 (499)
Q Consensus 215 ~~d~~~~~W---~~~~~~~-~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~-----~l~~~~~~~ 283 (499)
+|+-.+... ..+.... .+|..... ++... ++++|+|-| +..|+||..+..-. .+...++.
T Consensus 74 ~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gi- 144 (196)
T 3c7x_A 74 VFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGI- 144 (196)
T ss_dssp EEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTC-
T ss_pred EEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCc-
Confidence 998542211 1121111 13322222 33332 578999977 26899998765321 11111111
Q ss_pred CCCCCCCceEEEEEc-CceEEEEEcCCCCCCCceEEEEECCCC
Q 010847 284 PLASEGLSVCSAIIE-GEHHLVAFGGYNGKYNNEVFVMRLKPR 325 (499)
Q Consensus 284 p~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 325 (499)
| ...-++... +...+|.|-|. ..|+||....
T Consensus 145 p-----~~idaAf~~~~~~~~YfFkg~------~y~r~d~~~~ 176 (196)
T 3c7x_A 145 P-----ESPRGSFMGSDEVFTYFYKGN------KYWKFNNQKL 176 (196)
T ss_dssp C-----SSCSEEEECTTSSEEEEEETT------EEEEEETTTT
T ss_pred C-----CCcceeEEecCCCEEEEEECC------EEEEEECCcc
Confidence 1 112223333 22367777663 6889998654
No 425
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=53.08 E-value=85 Score=25.28 Aligned_cols=26 Identities=4% Similarity=0.118 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 458 TIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 458 ~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
++++.+..+.++...++..++++.+.
T Consensus 116 ~l~~~l~~l~~~i~~~~~~l~~l~~~ 141 (151)
T 2zdi_C 116 KTQGALAELEKRIGEVARKAQEVQQK 141 (151)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555566666666665544433
No 426
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=52.36 E-value=1.3e+02 Score=26.99 Aligned_cols=214 Identities=9% Similarity=-0.015 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEe
Q 010847 45 SDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVM 124 (499)
Q Consensus 45 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 124 (499)
..+++||+....-...... .+...-++.-+++||+......... ++.||+.+++...+
T Consensus 53 ~~I~~~d~~g~~~~~~~~~------------------~~p~gia~~~dG~l~vad~~~~~~~----v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHATVE------------------GKVSGLAFTSNGDLVATGWNADSIP----VVSLVKSDGTVETL 110 (306)
T ss_dssp TEEEEECTTCCEEEEEECS------------------SEEEEEEECTTSCEEEEEECTTSCE----EEEEECTTSCEEEE
T ss_pred CeEEEECCCCceEEEEeCC------------------CCceeEEEcCCCcEEEEeccCCcce----EEEEcCCCCeEEEE
Q ss_pred ecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEeeecC-----CCCCCCccceEEEEcCcEEE
Q 010847 125 ETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVEVTQ-----TPPAPRYDHSAALHANRYLI 199 (499)
Q Consensus 125 ~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~-----~~p~~r~~~~~~~~~~~~l~ 199 (499)
. ..+..+.....+...+...++.-.. ...+|++|+.+..-......+ ...........+..++++||
T Consensus 111 ~---~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 111 L---TLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp E---ECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred E---eCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Q ss_pred EEcCCCCCCCCCcEEEEECCC-CceEecccCCCCCCcCcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEecc
Q 010847 200 VFGGCSHSIFFNDLHVLDLQT-NEWSQPEIKGDLVTGRAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTS 278 (499)
Q Consensus 200 v~GG~~~~~~~~~i~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~ 278 (499)
+.--.. +.|++||+.. ............ ..-...++--++++||.-...+. +.+||+. +....+..
T Consensus 183 v~d~~~-----~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~-----V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 183 VSNTEK-----MLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNS-----VVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp EEETTT-----TEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCC-----EEEECTT-CCEEEEEC
T ss_pred EEeCCC-----CEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCe-----EEEECCC-CCEEEEee
Q ss_pred CCCCCCCCCCCCceEEEEE---cCceEEEEE
Q 010847 279 VKGRNPLASEGLSVCSAII---EGEHHLVAF 306 (499)
Q Consensus 279 ~~~~~p~~~~~~~~~~~~~---~~~~~l~v~ 306 (499)
.+.....+ .+++.- .+...|||.
T Consensus 250 ~~~~~~~p-----~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 250 AEQGVIGS-----TAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp GGGTCTTE-----EEEEECCSTTTTTEEEEE
T ss_pred cccccCCc-----eEEEEecccCCCCEEEEE
No 427
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=52.13 E-value=1.6e+02 Score=30.76 Aligned_cols=161 Identities=10% Similarity=0.048 Sum_probs=0.0
Q ss_pred CcccCcEEEEEcCC--CceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccC--------CCCCCCce
Q 010847 41 GRFLSDVQVFDLRS--LAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHY--------KKSSDSMI 110 (499)
Q Consensus 41 ~~~~~~~~~yd~~t--~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~--------~~~~~~~~ 110 (499)
..+.+.++..|+.. +.|..+.. ++...-....++.+|+....+ ....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 321 (711)
T 4hvt_A 265 DFYNYDNYILDTKYKNLKLQKINM-------------------PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGS---- 321 (711)
T ss_dssp SSSCEEEEEEECSSSSCEEEECCS-------------------CTTCEEEEEETTEEEEECSSCEEETTEEECTTC----
T ss_pred ccCceeEEEEcCCCCCCcceEeec-------------------CCcceEeeeECCEEEEEECcccccccccCCCCe----
Q ss_pred EEEEECCC--------CcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCeeEEee-ecCCC
Q 010847 111 VRFIDLET--------NLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMTWDAVE-VTQTP 181 (499)
Q Consensus 111 ~~~yd~~t--------~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~ 181 (499)
+..+|+.+ ..|+.+- .+-..+.-..+...++.||+..-.+. ...++++|+.++.|.... ..-+.
T Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~l~~~~~~~~----~~~l~~~~~~~g~~~~~~~i~lp~ 394 (711)
T 4hvt_A 322 LVALHFTDLLKTESDKTSLKILF---TPTANEVFNFISTTKDRVFLATYDNV----VAKVVTFTLENEQWTKPVVLKLPY 394 (711)
T ss_dssp EEEEEGGGGGSCGGGCTTCEEEE---CCCTTEEEEEEEECSSCEEEEEEETT----EEEEEEECEETTEECCCEEECCCS
T ss_pred EEEEECCcccccccccccceEEE---CCCCCCeEEEEEEECCEEEEEEEECC----EEEEEEEECCCCceEEEeccCCCC
Q ss_pred CCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCc
Q 010847 182 PAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTG 235 (499)
Q Consensus 182 p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~ 235 (499)
.......+....++..++.+.+..... .++.||+. +.++.+........+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~ss~~~P~---~~~~~d~~-~~~~~l~~~~~~~~~ 444 (711)
T 4hvt_A 395 QNAIFGMSSYEEEEEALITIENSIVPP---TIYLWVKT-HELKIIRKALYSFDS 444 (711)
T ss_dssp TTCEEEEECCTTCSCEEEEEECSSSCC---EEEEECTT-SCEEEEECCSSCCCG
T ss_pred CeEEEEEeecCcCCEEEEEEecCCCCC---EEEEEeCC-CcEEEEecCCcccCc
No 428
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=52.04 E-value=1.1e+02 Score=32.09 Aligned_cols=146 Identities=11% Similarity=0.052 Sum_probs=0.0
Q ss_pred cCcEEEEEcCCC--ce--EEeeeCcccccCccccCCCCCCCCCccceeEEEE---CCEEEEEcccC--CCCCCCceEEEE
Q 010847 44 LSDVQVFDLRSL--AW--SNLRLETELDADKTEDSGLLEVLPPMSDHCMVKW---GTKLLILGGHY--KKSSDSMIVRFI 114 (499)
Q Consensus 44 ~~~~~~yd~~t~--~W--~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~---~~~iyv~GG~~--~~~~~~~~~~~y 114 (499)
.+.++++|+.++ .+ ..+.. ...+...... ++.||+..... .... ++.+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~-------------------~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~----L~~~ 350 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRP-------------------REKGVRYDVQMHGTSHLVILTNEGGAVNHK----LLIA 350 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSC-------------------CCTTCCEEEEEETTTEEEEEECTTTCTTCE----EEEE
T ss_pred CceEEEEECCCCCCCceeEEeec-------------------CCCCceEEEeeeeCCEEEEEeCCCCCCCcE----EEEE
Q ss_pred ECCC-CcEEE-eecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEEC-------CCCe-eEEeeecCCCCCC
Q 010847 115 DLET-NLCGV-METSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDL-------ETMT-WDAVEVTQTPPAP 184 (499)
Q Consensus 115 d~~t-~~W~~-~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-------~t~~-W~~~~~~~~~p~~ 184 (499)
|+.+ ..|.. +. .......-......++.|++..-.+. ...++++|+ .+.. -..+ .+|..
T Consensus 351 d~~~~~~~~~~li---~~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~l----~l~~~ 419 (751)
T 2xe4_A 351 PRGQPSDWSHVLV---DHSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLREV----VMEEP 419 (751)
T ss_dssp ETTSTTCCCCEEE---CCCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEEC----CCCCS
T ss_pred cCCCcccceeeEE---CCCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceEE----CCCCc
Q ss_pred CccceE------EEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEec
Q 010847 185 RYDHSA------ALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQP 226 (499)
Q Consensus 185 r~~~~~------~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~ 226 (499)
...... ...++..+|.+....... .++.||+.+++.+.+
T Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~---~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 420 IFTVHLVESQMLEYEEPTFRMEYSSLATPN---TWFDVSPQDHSRTAV 464 (751)
T ss_dssp SCEEEECGGGCCCTTCSCEEEEEEETTEEE---EEEEECTTTCCEEEE
T ss_pred eeEEEeccCcccCCCCCEEEEEEeCCCCCC---EEEEEECCCCcEEEE
No 429
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=52.02 E-value=41 Score=21.09 Aligned_cols=41 Identities=10% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHH
Q 010847 422 SKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENE 462 (499)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e 462 (499)
++++..+++-+.++-.++..++..-.+++|+...++++-++
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
No 430
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=51.86 E-value=47 Score=21.71 Aligned_cols=47 Identities=21% Similarity=0.236 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH----HHHHHHHHHHHh
Q 010847 423 KELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQ 469 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~----~~~~e~~~~~~~ 469 (499)
+|.-+++..+..-+.++++|-.--..+.++|+.+| +|+.|...+++|
T Consensus 13 qeylevK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~q 63 (63)
T 2w6a_A 13 QEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQP 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhccC
No 431
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=51.80 E-value=1.7e+02 Score=28.44 Aligned_cols=111 Identities=10% Similarity=0.049 Sum_probs=0.0
Q ss_pred ccchhhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 377 KDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 377 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
+.+..+++.-....+-.+....+...+..++++.........++.+.+++.++..++...+-..+...+++.+.+-|+..
T Consensus 100 ~eLE~e~k~d~~~~khn~~I~~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE 179 (526)
T 3iyk_A 100 KELEDEQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKE 179 (526)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q ss_pred H-----HHHHHHHHHHHhHHHHHHHHHHhhcccccC
Q 010847 457 Q-----TIENEVQILRQQKSAFEQEMERATSVQTQG 487 (499)
Q Consensus 457 ~-----~~~~e~~~~~~~~~~~~~~~~~~~~~q~q~ 487 (499)
. ...+-+..+.+..+++.+..+-.++...++
T Consensus 180 ~~~Rt~dE~~mi~~yr~k~~aL~~aIe~Er~~~~EE 215 (526)
T 3iyk_A 180 IGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEE 215 (526)
T ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
No 432
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=51.54 E-value=69 Score=23.48 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhh
Q 010847 384 DAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCF 440 (499)
Q Consensus 384 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (499)
+.|-.+--.++..+.....+..+|+......-.++.+++.+++.++.+++.+...-+
T Consensus 33 qELIqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~ 89 (104)
T 3s9g_A 33 QELIKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENE 89 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
No 433
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=51.42 E-value=68 Score=23.41 Aligned_cols=73 Identities=11% Similarity=0.142 Sum_probs=0.0
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHH
Q 010847 406 RFREKIDEVNSTHSELSKELSSVQGQLV-AERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~l~~~~-~~~~e~~~~~~~~~~~~~~~~ 478 (499)
+|.+.++.++.+.+...++....+.+.. .-.-++...-++++.+++.+-+++ .-.+-.+.+.+++..+..+|+
T Consensus 11 Rl~ELLD~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe 85 (92)
T 3vp9_A 11 KLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLE 85 (92)
T ss_dssp ------CCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 434
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=51.26 E-value=70 Score=23.46 Aligned_cols=59 Identities=24% Similarity=0.237 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 423 KELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~---------~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
++|+.+-..+..--+++.-||++-+.++.+++..+ -.+.++..+++++..+..+..++.
T Consensus 9 e~mq~LNdRlAsyIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~ 76 (93)
T 3s4r_A 9 VELQELNDRFANLIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVE 76 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
No 435
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=51.22 E-value=91 Score=24.81 Aligned_cols=68 Identities=9% Similarity=0.020 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 471 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~ 471 (499)
..++++.+..............+.++++++.+++++.+++..+..++..+...++...+.++-....+
T Consensus 62 L~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 129 (142)
T 3gp4_A 62 IEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFN 129 (142)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
No 436
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=51.05 E-value=1.5e+02 Score=27.26 Aligned_cols=179 Identities=8% Similarity=0.012 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCCCccCcEEEEECCCCe
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSRKLLNDVHFLDLETMT 171 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 171 (499)
++.+++.|+ .+.+.+||..+..-.... ..+ +.....+....+.+.+.||.+. .+.++|..+++
T Consensus 30 dg~~la~g~-------~~~~~iw~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~d~------~v~iWd~~~~~ 92 (355)
T 3vu4_A 30 DQSCLILST-------LKSFEIYNVHPVAHIMSQ---EMR-HLSKVRMLHRTNYVAFVTGVKE------VVHIWDDVKKQ 92 (355)
T ss_dssp TSSEEEEEC-------SSEEEEEEETTEEEEEEE---ECS-CCCEEEECTTSSEEEEECSSTT------EEEEEETTTTE
T ss_pred CCCEEEEEc-------CCEEEEEecCCcceeeee---ecC-CeEEEEEcCCCCEEEEEECCcc------EEEEEECCCCc
Q ss_pred eEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCC--ceEecccCCCCCCcCcccEEEEECCEEE
Q 010847 172 WDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTN--EWSQPEIKGDLVTGRAGHAGITIDENWY 249 (499)
Q Consensus 172 W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~l~ 249 (499)
-...-. .......+.+..+.+++... +.+++||+.+. .-..+.. ....+.+....+
T Consensus 93 ~~~~~~------~~~~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~~~~~~~~~---------~~~~~~~s~~~l 150 (355)
T 3vu4_A 93 DVSRIK------VDAPVKDLFLSREFIVVSYG-------DVISVFKFGNPWKRITDDIR---------FGGVCEFSNGLL 150 (355)
T ss_dssp EEEEEE------CSSCEEEEEECSSEEEEEET-------TEEEEEESSTTCCBSSCCEE---------EEEEEEEETTEE
T ss_pred EEEEEE------CCCceEEEEEcCCEEEEEEc-------CEEEEEECCCCceeeEEecc---------CCceEEEEccEE
Q ss_pred EEe-CCCCCCCcceEEEEECCCCc-----------------eEEeccCCCCCCCCCCCCceEEEEEcCceEEEEEcCCCC
Q 010847 250 IVG-GGDNNNGCQETIVLNMTKLA-----------------WSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNG 311 (499)
Q Consensus 250 v~G-G~~~~~~~~~~~~~d~~~~~-----------------W~~l~~~~~~~p~~~~~~~~~~~~~~~~~~l~v~GG~~~ 311 (499)
++. |..... +.+||+.+.. -..+. .+......+....+..+++.|+.++
T Consensus 151 a~~sg~~~g~----v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~---------~h~~~v~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 151 VYSNEFNLGQ----IHITKLQSSGSATTQDQGVQQKAILGKGVLIK---------AHTNPIKMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp EEEESSCTTC----EEEEECCC------------------CCEEEC---------CCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EEeCCCcCcE----EEEEECCCCCccccccccccccccCcccEEEE---------ccCCceEEEEECCCCCEEEEEeCCC
Q ss_pred CCCce-EEEEECCCCC
Q 010847 312 KYNNE-VFVMRLKPRD 326 (499)
Q Consensus 312 ~~~~~-~~~~~~~~~~ 326 (499)
. +.++|+....
T Consensus 218 ----~~v~iwd~~~~~ 229 (355)
T 3vu4_A 218 ----TIIRVFKTEDGV 229 (355)
T ss_dssp ----SEEEEEETTTCC
T ss_pred ----CEEEEEECCCCc
No 437
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=51.01 E-value=61 Score=30.95 Aligned_cols=107 Identities=17% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCceEEEEECCCCc------EEEeec----CCCCCCCCcceEEEEECCEEEEE---cCcCCCCCccCcEEEEECCCCeeE
Q 010847 107 DSMIVRFIDLETNL------CGVMET----SGKVPVARGGHSVTLVGSRLIIF---GGEDRSRKLLNDVHFLDLETMTWD 173 (499)
Q Consensus 107 ~~~~~~~yd~~t~~------W~~~~~----~g~~p~~r~~~~~~~~~~~lyv~---GG~~~~~~~~~~v~~yd~~t~~W~ 173 (499)
+...++++|..+.. |..... .|-.|.+....+...-+++||+. ++.+......+.|+.+|+.|.+-.
T Consensus 245 ~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~ 324 (386)
T 3sjl_D 245 YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 324 (386)
T ss_dssp TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE
Q ss_pred EeeecCCCCCCCccceEEEEcCc-EEEEEcCCCCCCCCCcEEEEECCCCc
Q 010847 174 AVEVTQTPPAPRYDHSAALHANR-YLIVFGGCSHSIFFNDLHVLDLQTNE 222 (499)
Q Consensus 174 ~~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~i~~~d~~~~~ 222 (499)
.--..+ .+.....+.-++. .||+..+.+ +++.+||..+++
T Consensus 325 ~~i~vg----~~~~~lavs~D~~~~ly~tn~~~-----~~VsViD~~t~k 365 (386)
T 3sjl_D 325 AKFEMG----HEIDSINVSQDEKPLLYALSTGD-----KTLYIHDAESGE 365 (386)
T ss_dssp EEEEEE----EEECEEEECSSSSCEEEEEETTT-----TEEEEEETTTCC
T ss_pred EEEECC----CCcceEEECCCCCeEEEEEcCCC-----CeEEEEECCCCc
No 438
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=50.85 E-value=1.3e+02 Score=30.91 Aligned_cols=156 Identities=11% Similarity=0.130 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcccCCCCCCCceEEEEECCC-CcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcCcCCCCCccCcE
Q 010847 87 CMVKWGTKLLILGGHYKKSSDSMIVRFIDLET-NLCGVMETSGKVPVARGGHSVTLV---GSRLIIFGGEDRSRKLLNDV 162 (499)
Q Consensus 87 s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v 162 (499)
+++...+++|+|-|.. +|+++... ............|.--...-++.. ++++|+|=| +..
T Consensus 448 Ait~~rg~~yfFKg~~--------yWr~~~~~~~~~~P~~Is~~wp~LP~~IDAA~~~~~~~k~yFFkG--------~~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDRF--------IWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAG--------NEY 511 (631)
T ss_dssp EEEECSSSEEEECSSE--------EEEESCTTSCCEEEEEGGGTCTTSCSSCSBCCEETTTTEEEEEET--------TEE
T ss_pred eeEecCCcEEEEcCCE--------EEEEcCCCCCCCCceeccccCCCCCccceEEEEECCCCEEEEEec--------CEE
Q ss_pred EEEECCCCee---EEeeecCCCCCCCccceEEEE-cCcEEEEEcCCCCCCCCCcEEEEECCCCc----eEecccCCCCCC
Q 010847 163 HFLDLETMTW---DAVEVTQTPPAPRYDHSAALH-ANRYLIVFGGCSHSIFFNDLHVLDLQTNE----WSQPEIKGDLVT 234 (499)
Q Consensus 163 ~~yd~~t~~W---~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~i~~~d~~~~~----W~~~~~~~~~p~ 234 (499)
|+|+..+..= +.+...|-+..+..--++... .++++|+|-| +..|+||..+.. .-+.....-+..
T Consensus 512 Wry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~ 584 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 584 (631)
T ss_dssp EEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSC
T ss_pred EEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCC
Q ss_pred cCcccEEEEEC--CEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 235 GRAGHAGITID--ENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 235 ~r~~~~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
+..-.++.... +.+|+|-| +..|+||..+..
T Consensus 585 p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 585 PDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 617 (631)
T ss_dssp CTTCCEEECCTTSCBCEEEET-------TEEECCBTTBTT
T ss_pred CCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccce
No 439
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=50.82 E-value=89 Score=24.60 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred hhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 405 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
......+.+.-..+-...++++.+-..|=....-+++..+++++++++++... ++++.+.+....++.++.-+.....
T Consensus 53 ~~f~~~~~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i~~ 131 (132)
T 1ykh_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDFVD 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 440
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=50.71 E-value=1.1e+02 Score=25.76 Aligned_cols=111 Identities=13% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEEEECCEEEEEcCcCCCCCccCcEEEEECCC--CeeEEeeecCCCCCCCccceEEEEc--CcEEEEEcCCCCCCCCCcE
Q 010847 138 SVTLVGSRLIIFGGEDRSRKLLNDVHFLDLET--MTWDAVEVTQTPPAPRYDHSAALHA--NRYLIVFGGCSHSIFFNDL 213 (499)
Q Consensus 138 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~p~~r~~~~~~~~~--~~~l~v~GG~~~~~~~~~i 213 (499)
+++.+++.+|+| .-+.+|.++... ...........-|.--...-++... ++.+|+|-| +..
T Consensus 11 Ai~~~~g~~yfF--------kg~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~IDAa~~~~~~~~~yfFkG-------~~y 75 (195)
T 1itv_A 11 AIAEIGNQLYLF--------KDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSG-------RQV 75 (195)
T ss_dssp EEEEETTEEEEE--------ETTEEEEECCSSSCCCEEEEEHHHHCTTSCSSCSEEEECTTTCCEEEEET-------TEE
T ss_pred EEEEeCCEEEEE--------ECCEEEEEECCccccCCCcEEhhhccCCCCCCccEEEEECCCCeEEEEeC-------CEE
Q ss_pred EEEECCCCceEecccCCCCCCc----CcccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCc
Q 010847 214 HVLDLQTNEWSQPEIKGDLVTG----RAGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLA 272 (499)
Q Consensus 214 ~~~d~~~~~W~~~~~~~~~p~~----r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 272 (499)
|+|+..+..- +.....+-.| .-.++....++++|+|-| +..|+||..+.+
T Consensus 76 w~~~~~~~~~--Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~ 129 (195)
T 1itv_A 76 WVYTGASVLG--PRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQM 129 (195)
T ss_dssp EEEETTEEEE--EEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTE
T ss_pred EEEcCCccCC--CEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCccc
No 441
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=50.66 E-value=43 Score=20.92 Aligned_cols=44 Identities=16% Similarity=0.187 Sum_probs=0.0
Q ss_pred HhhhhhhHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHH
Q 010847 434 AERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 434 ~~~~~~~~~~~~~~e~~~~l~~~~-~~~~e~~~~~~~~~~~~~~~ 477 (499)
..++++.+++..+.-++-++..+- +...-...+.|++..+|..+
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~v 46 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 442
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=50.62 E-value=38 Score=24.13 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcccccCCCc
Q 010847 445 QIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQTQGSGG 490 (499)
Q Consensus 445 ~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~q~q~~~~ 490 (499)
+..-++.-...+..|+++.+.+.++++.+.++.++++++..+-+++
T Consensus 38 K~~iL~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~~~ 83 (83)
T 1nkp_B 38 RAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALGGC 83 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
No 443
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=50.56 E-value=2.3e+02 Score=29.31 Aligned_cols=235 Identities=7% Similarity=-0.077 Sum_probs=0.0
Q ss_pred ccccCCCCCeEEcccCCCCCCcccc-----eEEEEcCCCCCcccCcEEEEEcCC----CceEEeeeCcccccCccccCCC
Q 010847 6 WHLELPYDLWVTLPVSGARPSPRYK-----KLYIVGGSRNGRFLSDVQVFDLRS----LAWSNLRLETELDADKTEDSGL 76 (499)
Q Consensus 6 ~~~~~~~~~W~~~~~~~~~p~~r~~-----~l~~~GG~~~~~~~~~~~~yd~~t----~~W~~~~~~~~~~~~~~~~~~~ 76 (499)
..+++.......+......|..-.- .||+. +.....|+++++.. ..-..+....
T Consensus 389 ~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~s-----D~~~~~I~~~~~~g~~~~~~~~~~i~~~------------ 451 (699)
T 1n7d_A 389 RKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWS-----DLSQRMICSTQLDRAHGVSSYDTVISRD------------ 451 (699)
T ss_dssp CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEEC-----CTTTTSBEEEESCCCCC-CCCCCBCCSC------------
T ss_pred EEEeCCCCcceeeeccCcceEEEccccccCeEEEE-----ecCCCeEEEEecCCCCCCcceEEEEeCC------------
Q ss_pred CCCCCCccceeEEEECCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcCcCCCC
Q 010847 77 LEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFGGEDRSR 156 (499)
Q Consensus 77 ~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 156 (499)
.....+.++...++.||+.-..... |.++++....-..+. ......-...++.-.+..+++.-.....
T Consensus 452 ---~~~P~glavD~~~g~LY~tD~~~~~------I~v~d~dg~~~~~l~---~~~~~~P~giavDp~~g~ly~td~~~~~ 519 (699)
T 1n7d_A 452 ---IQAPDGLAVDWIHSNIYWTDSVLGT------VSVADTKGVKRKTLF---REQGSKPRAIVVDPVHGFMYWTDWGTPA 519 (699)
T ss_dssp ---C--CCCEECCCSSSBCEECCTTTSC------EEEEBSSSCCEEEEC---CCSSCCCCCEECCSSSSCCEECCCSSSC
T ss_pred ---CCCcceEEEEeeCCcEEEEeccCCe------EEEEecCCCceEEEE---eCCCCCcceEEEccCCCcEEEcccCCCC
Q ss_pred CccCcEEEEECCCCeeEEeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCCCCcC
Q 010847 157 KLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDLVTGR 236 (499)
Q Consensus 157 ~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~p~~r 236 (499)
. |+++++....-..+. ......-...++...++.||+.-... +.|+++|+....-..+ ........
T Consensus 520 ~----I~~~~~dG~~~~~l~---~~~l~~PnGlavd~~~~~LY~aD~~~-----~~I~~~d~dG~~~~~~--~~~~~~~~ 585 (699)
T 1n7d_A 520 K----IKKGGLNGVDIYSLV---TENIQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTI--LEDEKRLA 585 (699)
T ss_dssp C----EEBCCSSSCCCCEES---CSSCSSCCCEEECTTTCCEEEEETTT-----TEEEEECSSSSCCEEE--CCCSSSCS
T ss_pred e----EEEEeCCCCCeeEEE---eCCCCCccEEEEeccCCEEEEEecCC-----CeEEEEccCCCceEEE--EecCCcCC
Q ss_pred cccEEEEECCEEEEEeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCC
Q 010847 237 AGHAGITIDENWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASE 288 (499)
Q Consensus 237 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~ 288 (499)
..+++++.++.+|+. ....+.+.++|+.++.-..+...+...|....
T Consensus 586 ~P~glavd~~~lywt-----d~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWT-----DIINEAIFSANRLTGSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp SCCCCEEETTEEEEE-----CSTTTCEEEEETTTEEEEECCCTTCSSCCCCC
T ss_pred CceEeEEECCEEEEE-----eCCCCeEEEEEccCCCceEEeecCCCCCcEEE
No 444
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=50.40 E-value=21 Score=34.80 Aligned_cols=71 Identities=14% Similarity=0.338 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 382 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 382 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
++-.+.++++.+.....+.+.+...+..++...+... ++.+++..+...+++++..++.++.+++++++.+
T Consensus 31 ~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 2dq3_A 31 KVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREG----KDTTEIQNRVKELKEEIDRLEEELRKVEEELKNT 101 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSSC----SCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 445
>1tu3_F RAB GTPase binding effector protein 1; rabaptin5, effector-binding, protein transport; HET: GNP; 2.31A {Homo sapiens} SCOP: h.1.27.2
Probab=50.05 E-value=23 Score=24.43 Aligned_cols=56 Identities=16% Similarity=0.204 Sum_probs=0.0
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010847 430 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQT 485 (499)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~q~ 485 (499)
....+++..+.+++.+++-++.+|...+..++..-++-|.++...+.+.++.+..+
T Consensus 5 ~~k~~Le~~~~e~k~kv~~LQ~eLdtsE~VQrDFVkLSQsLQvqLE~IRqadt~~q 60 (79)
T 1tu3_F 5 SAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLER 60 (79)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
No 446
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=49.93 E-value=58 Score=32.09 Aligned_cols=75 Identities=7% Similarity=0.004 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhc--------------------cchHHHHHHHHH----HHH-HHHhh
Q 010847 382 DIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNS--------------------THSELSKELSSV----QGQ-LVAER 436 (499)
Q Consensus 382 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~----~~~-~~~~~ 436 (499)
++-.+.++++.+...+++.+.+...+..++-+... ......++.+++ ..+ ...++
T Consensus 38 ~~~~ld~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 117 (484)
T 3lss_A 38 AIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLS 117 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchhhHHHhhHHHHHHHHHHHH
Q ss_pred hhhhHHHHHHHHHHHHHHhH
Q 010847 437 SRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 437 ~~~~~~~~~~~e~~~~l~~~ 456 (499)
+++..++.++.+++.++..+
T Consensus 118 ~~i~~le~~~~~~~~~~~~~ 137 (484)
T 3lss_A 118 DQVAGLAKEAQQLEEERDKL 137 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
No 447
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=49.85 E-value=13 Score=34.39 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 406 RFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
.+-++|..++..+...+.+++.++..++.+++++++|+.++.+++.+.+.
T Consensus 1 ~~~~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l~~~~~~ 50 (319)
T 1fzc_C 1 KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQE 50 (319)
T ss_dssp ---------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 448
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=49.83 E-value=1.3e+02 Score=26.20 Aligned_cols=129 Identities=9% Similarity=0.096 Sum_probs=0.0
Q ss_pred HHhcccccccCccccccccccCCCCcccccchhhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHH-------------hh
Q 010847 349 YALAKSEKLDIPKTLSSKFAGIGNDLSEKDVRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDE-------------VN 415 (499)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------~~ 415 (499)
|.+.+..-+....+......+...+.|.+.+...+++..+++...+..+.+.-.+..+-..++.. .+
T Consensus 17 fEVILkpps~~~~~~~~~s~P~kk~~SleEIqkKLeAAEERRks~Ea~~lk~laekrEhe~evlqKa~Een~~F~k~aeE 96 (240)
T 4f61_I 17 WEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKE 96 (240)
T ss_dssp EEEEEECCSSCSSCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHH
Q 010847 416 STHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~---------~~~~e~~~~~~~~~~~~~~~ 477 (499)
.-....+...+.....+..+.+++.+-+.-..+..+.++... +++++++...++....+.++
T Consensus 97 kL~~KME~~kEnReA~laal~erLkek~~~aeeVRr~~~~~~~~~~k~~~eei~~KLeaAeErRk~qea~~ 167 (240)
T 4f61_I 97 KLAQKMESNKENREAHFAAMLERLQEKDKHAEEVRQRAIEENNNWIKMAKEKLAQKMESNKENRKYQEAEL 167 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 449
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=49.01 E-value=2.2e+02 Score=28.60 Aligned_cols=124 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCC-----CceEeccc-CCCCCCcCcccEEEEECC---EEEEEeCCCCCCCcceEEEEE
Q 010847 197 YLIVFGGCSHSIFFNDLHVLDLQT-----NEWSQPEI-KGDLVTGRAGHAGITIDE---NWYIVGGGDNNNGCQETIVLN 267 (499)
Q Consensus 197 ~l~v~GG~~~~~~~~~i~~~d~~~-----~~W~~~~~-~~~~p~~r~~~~~~~~~~---~l~v~GG~~~~~~~~~~~~~d 267 (499)
+.+++||..... ..+|.+|+.. -.|+.-.. ...+..-......+.+.+ .+++-+|++....-..+|++|
T Consensus 152 rtvLvggmg~GG--~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d 229 (570)
T 3hx6_A 152 HTVLIGSLRAGG--KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIID 229 (570)
T ss_dssp EEEEEEECTTSC--SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEE
T ss_pred eEEEEEecCCCC--cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEE
Q ss_pred CCCCceEEeccCCCCCCCCCCCCceEEEEEcCc---eEEEEEcCCCCCCCceEEEEECCCCCC
Q 010847 268 MTKLAWSILTSVKGRNPLASEGLSVCSAIIEGE---HHLVAFGGYNGKYNNEVFVMRLKPRDI 327 (499)
Q Consensus 268 ~~~~~W~~l~~~~~~~p~~~~~~~~~~~~~~~~---~~l~v~GG~~~~~~~~~~~~~~~~~~W 327 (499)
+.++.-..-...+.....+.--.....+-.+++ +++|. |-..+ .+|+||+.....
T Consensus 230 ~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~Ya-GDl~G----nlWRfDl~~~~~ 287 (570)
T 3hx6_A 230 METGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYA-GDLQG----NLWRFDLIAGKV 287 (570)
T ss_dssp TTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEE-EETTS----EEEEEECSCSSC
T ss_pred CCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEE-EeCCC----cEEEEEcCCCCc
No 450
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=48.95 E-value=29 Score=25.39 Aligned_cols=47 Identities=11% Similarity=0.192 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 437 SRCFKLEAQIAELQKMLESSQ---------TIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 437 ~~~~~~~~~~~e~~~~l~~~~---------~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
.+..++..++.++.+++..+- ++.+++..+..+++.+..++...+..
T Consensus 23 ~~~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~ 78 (93)
T 3sjb_C 23 KKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKA 78 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 451
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=48.50 E-value=1.8e+02 Score=27.47 Aligned_cols=100 Identities=13% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHH----------------HHHHHHHHHHHhhhhhhHHHHHHH
Q 010847 384 DAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSK----------------ELSSVQGQLVAERSRCFKLEAQIA 447 (499)
Q Consensus 384 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 447 (499)
..+.+.-....+.++-.++..+-..+-+.-.+++....++ +++.+....+.++.++..++...+
T Consensus 143 ~~~~~~~~~~~~e~~~k~~a~~af~~~~~~f~~q~~~~e~~~~~~~~~~~~~~~~~e~~~~~~n~~~l~~~~~~~~~~~~ 222 (373)
T 3hhm_B 143 DRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRR 222 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcChHHHHHHHHhHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 448 ELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 448 e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
+++++|+.......++++....+.-..-+|.+.+++
T Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~lkp~l~ql~k~rd~ 258 (373)
T 3hhm_B 223 RLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRDQ 258 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHH
No 452
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=48.42 E-value=75 Score=22.98 Aligned_cols=63 Identities=16% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010847 408 REKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQK 470 (499)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~ 470 (499)
....+....-++...+.-+..+......+.+..+|+.+-..|+.+++.+.+....+..+.-++
T Consensus 14 ~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 14 DEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
No 453
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=47.65 E-value=99 Score=24.16 Aligned_cols=85 Identities=11% Similarity=0.183 Sum_probs=0.0
Q ss_pred hhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHh----------------------------------------
Q 010847 396 SLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAE---------------------------------------- 435 (499)
Q Consensus 396 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 435 (499)
.+++......+++.+++....++..+...+.+.++.++..
T Consensus 2 ~~~~l~~~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~~~~lvplg~~~yv~a~i~~~~~V~v~lG~g~~ 81 (133)
T 1fxk_C 2 ALAEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVA 81 (133)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEEETTEEEEEECCSTTEEEEEEETTEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEcCCCcEEEEEECCCCEEEEEcCCCEE
Q ss_pred -----hhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 436 -----RSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 436 -----~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
.+-..-+++++..++..+ .++++.++.++++...++++++++.+.
T Consensus 82 vE~~~~eA~~~l~~r~~~l~~~~---~~l~~~l~~l~~~i~~~~~~l~~~~~~ 131 (133)
T 1fxk_C 82 IKKNFEDAMESIKSQKNELESTL---QKMGENLRAITDIMMKLSPQAEELLAA 131 (133)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhc
No 454
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=47.61 E-value=66 Score=26.01 Aligned_cols=46 Identities=15% Similarity=0.004 Sum_probs=0.0
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHH
Q 010847 430 GQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQ 475 (499)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~ 475 (499)
++.+.+++...++..+++.++++|+++...+...+.|.++=++.++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN~~~e~ 50 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQ 50 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 455
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=47.54 E-value=35 Score=24.29 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhccccc
Q 010847 445 QIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQTQ 486 (499)
Q Consensus 445 ~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~q~q 486 (499)
.+.-+++-...+..|+++.+++.++++.+..+.++++++..|
T Consensus 38 k~~iL~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~ 79 (80)
T 1nlw_A 38 TLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEK 79 (80)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 456
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=47.53 E-value=1e+02 Score=24.44 Aligned_cols=97 Identities=9% Similarity=0.130 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccc------------hHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 010847 381 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTH------------SELSKELSSVQGQLVAERSRCFKLEAQIAE 448 (499)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 448 (499)
.+...-................+...|..+.+..+... ....+.++..+..+........+++....+
T Consensus 19 l~~~~~~~~~~~~~a~~~~le~e~~kl~~e~~i~eas~~~~~~~~le~~~~~l~rdleasr~akk~~ea~la~l~~~~~~ 98 (146)
T 2xnx_M 19 LELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKELEAITREQEINRNLLGNAKLELDQLSSEKEQ 98 (146)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHTTTTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHH
Q ss_pred HHHHHHhHH-----------HHHHHHHHHHHhHHHHHHHH
Q 010847 449 LQKMLESSQ-----------TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 449 ~~~~l~~~~-----------~~~~e~~~~~~~~~~~~~~~ 477 (499)
++.+++.+. .+.++++..+..+.+++..+
T Consensus 99 LeAE~aKLeEekQIseASRqgLrRDLeASReAKKqlEadl 138 (146)
T 2xnx_M 99 LTIEKAKLEEEKQISDASRQSLRRDLDASREAKKQVEKDL 138 (146)
T ss_dssp HHHHHHHHGGGTTTC-------------------------
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
No 457
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=47.41 E-value=31 Score=32.16 Aligned_cols=91 Identities=11% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010847 391 RVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQK 470 (499)
Q Consensus 391 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~ 470 (499)
..++..+.+.+.+...++..++..+.+++..+++++..+.-.++.---..+++....++.....+++.++.++++++.++
T Consensus 65 ~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l 144 (341)
T 3fpp_A 65 EQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL 144 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHhh
Q 010847 471 SAFEQEMERAT 481 (499)
Q Consensus 471 ~~~~~~~~~~~ 481 (499)
+..+..++...
T Consensus 145 ~~a~~~l~~~~ 155 (341)
T 3fpp_A 145 DTAKTNLDYTR 155 (341)
T ss_dssp TTTTTTTTSSE
T ss_pred HHHHHhhhCCE
No 458
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=47.01 E-value=48 Score=23.96 Aligned_cols=45 Identities=9% Similarity=0.142 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAE 448 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 448 (499)
..+|+.-+++....+++.+.+.++.+.+.+..++++.++...+.+
T Consensus 26 le~Lee~leKl~~VveERree~~~~~~~~~er~~Kl~~~~e~l~~ 70 (86)
T 3nr7_A 26 LETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIA 70 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 459
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=46.98 E-value=70 Score=22.28 Aligned_cols=67 Identities=12% Similarity=0.229 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHHhhhh-hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 010847 384 DAIKEDKRVLELSLTEVRTENSR-FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQ 450 (499)
Q Consensus 384 ~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 450 (499)
..|.+-+...+....+.+.+.+. .+.+++++.........++...+.++..++..++.|+.+++-++
T Consensus 9 ~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 9 AAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 460
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=46.94 E-value=97 Score=30.51 Aligned_cols=104 Identities=11% Similarity=0.121 Sum_probs=0.0
Q ss_pred ccchhhHHHHHHHH-HHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHH-----------
Q 010847 377 KDVRTDIDAIKEDK-RVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEA----------- 444 (499)
Q Consensus 377 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 444 (499)
+.+.+.+..+.++. -+.-...++.+.....+-.++.++..+..+...++++++.+.-...+++-++..
T Consensus 4 ~~mmldi~~~r~~~~~~~v~~~~~~R~~~~~~~d~~~~ld~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~ 83 (484)
T 3lss_A 4 SMMVLDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEI 83 (484)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred ccccccHHHHHcCCCHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q ss_pred -------------HHHHHHHH----HHh-HHHHHHHHHHHHHhHHHHHHHHHHh
Q 010847 445 -------------QIAELQKM----LES-SQTIENEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 445 -------------~~~e~~~~----l~~-~~~~~~e~~~~~~~~~~~~~~~~~~ 480 (499)
.-.+.+.. +.+ ..++.+++..+.+++.++++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~i~~le~~~~~~~~~~~~~ 137 (484)
T 3lss_A 84 PPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLAKEAQQLEEERDKL 137 (484)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 461
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=46.86 E-value=1.3e+02 Score=26.31 Aligned_cols=66 Identities=11% Similarity=0.111 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHH----HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 418 HSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQ----TIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~----~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
+..+.++.+.+-.+++.+.=|-.-...++.|+..+++.++ .+.+++..+++.-..|+.++.....+
T Consensus 151 l~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~R 220 (242)
T 3uux_B 151 PSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDR 220 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
No 462
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=46.71 E-value=1.6e+02 Score=28.72 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHH
Q 010847 384 DAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEV 463 (499)
Q Consensus 384 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~ 463 (499)
.+++++-++ ++.+++.-..+..++..++++++...||.+..+.....++|..+.+.-+.+++-+|+.+.+.-.+.
T Consensus 294 ~elkqrqee-----e~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~ 368 (551)
T 2b5u_A 294 DQVKQRQDE-----ENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADA 368 (551)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHH
Q ss_pred HHHHHh
Q 010847 464 QILRQQ 469 (499)
Q Consensus 464 ~~~~~~ 469 (499)
..-..+
T Consensus 369 ~~~~~~ 374 (551)
T 2b5u_A 369 IAEIKQ 374 (551)
T ss_dssp HHHHHH
T ss_pred HHhhhh
No 463
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=46.69 E-value=63 Score=22.83 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHH
Q 010847 387 KEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKL 442 (499)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (499)
..+.........+-+....++...+..++.++..+..+++.++.++..++.-+..+
T Consensus 21 ~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll~q~ 76 (78)
T 1gu4_A 21 ERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
No 464
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=46.66 E-value=1.8e+02 Score=26.82 Aligned_cols=257 Identities=7% Similarity=-0.092 Sum_probs=0.0
Q ss_pred eEEEEcCCCCCcccCcEEEEEcCCCceEEeeeCcccccCccccCCCCCCCCCccceeEEEECCEEEEEcccCCCCCCCce
Q 010847 31 KLYIVGGSRNGRFLSDVQVFDLRSLAWSNLRLETELDADKTEDSGLLEVLPPMSDHCMVKWGTKLLILGGHYKKSSDSMI 110 (499)
Q Consensus 31 ~l~~~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~p~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 110 (499)
..+++|++... ---.++.+|+.+++.+.+... .........+.+..-+++.++.++.. .
T Consensus 3 ~~~~vg~~~~~-~~i~~~~~d~~~g~l~~~~~~-------------~~~~~~~~~~~a~spdg~~l~~~~~~-------~ 61 (365)
T 1jof_A 3 HHLMIGTWTPP-GAIFTVQFDDEKLTCKLIKRT-------------EIPQDEPISWMTFDHERKNIYGAAMK-------K 61 (365)
T ss_dssp EEEEEEESSSS-CEEEEEEEETTTTEEEEEEEE-------------ECCTTCCCSEEEECTTSSEEEEEEBT-------E
T ss_pred EEEEEEEccCC-CcEEEEEEECCCCCEEEeeEE-------------ccCCCCCCcEEEECCCCCEEEEEccc-------e
Q ss_pred EEEEECC-CCcEEEeecCCCCC--CCCcceEEEEECCEEEEEcCc-------------CCCCCccCcEEEEECC-CCeeE
Q 010847 111 VRFIDLE-TNLCGVMETSGKVP--VARGGHSVTLVGSRLIIFGGE-------------DRSRKLLNDVHFLDLE-TMTWD 173 (499)
Q Consensus 111 ~~~yd~~-t~~W~~~~~~g~~p--~~r~~~~~~~~~~~lyv~GG~-------------~~~~~~~~~v~~yd~~-t~~W~ 173 (499)
+.+||+. ++....+. ..+ ......+...-+..||++-+. . ...+.+|++. +.+..
T Consensus 62 v~~~~~~~~g~~~~~~---~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~-----~g~v~v~~~~~~g~~~ 133 (365)
T 1jof_A 62 WSSFAVKSPTEIVHEA---SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF-----AGYGNVFSVSETGKLE 133 (365)
T ss_dssp EEEEEEEETTEEEEEE---EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS-----CCEEEEEEECTTCCEE
T ss_pred EEEEEECCCCCEEEee---EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC-----CceEEEEccCCCCcCc
Q ss_pred EeeecCCCCCCCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECC-CCceEecccCCCCCCcCcccEEEEE--CCEEEE
Q 010847 174 AVEVTQTPPAPRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQ-TNEWSQPEIKGDLVTGRAGHAGITI--DENWYI 250 (499)
Q Consensus 174 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~--~~~l~v 250 (499)
.....-.......-+.++...++..+++..... +.|++||+. +++...+...........-..++.. +..+|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~----~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 209 (365)
T 1jof_A 134 KNVQNYEYQENTGIHGMVFDPTETYLYSADLTA----NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC----CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEE
Q ss_pred EeCCCCCCCcceEEEEECCCCceEEeccCCCCCCCCCCC---------CceEEE-EEcCceEEEEEc-CCCCCCCceEEE
Q 010847 251 VGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEG---------LSVCSA-IIEGEHHLVAFG-GYNGKYNNEVFV 319 (499)
Q Consensus 251 ~GG~~~~~~~~~~~~~d~~~~~W~~l~~~~~~~p~~~~~---------~~~~~~-~~~~~~~l~v~G-G~~~~~~~~~~~ 319 (499)
.+..++.- .+|.+|..++........-...|....+ .....+ ...+..+||+.. |.+......+.+
T Consensus 210 ~~~~~~~v---~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 210 LMEAGNRI---CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp EETTTTEE---EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred EECCCCeE---EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Q ss_pred EECC
Q 010847 320 MRLK 323 (499)
Q Consensus 320 ~~~~ 323 (499)
|++.
T Consensus 287 ~~~~ 290 (365)
T 1jof_A 287 FKLR 290 (365)
T ss_dssp EEEC
T ss_pred EEEC
No 465
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=46.62 E-value=47 Score=29.82 Aligned_cols=79 Identities=8% Similarity=0.032 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERAT 481 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 481 (499)
+...++.+++..+.++...+.+++..+.+++..+.-..+--...+++++.....+..+.++++++.+++..+..+++..
T Consensus 54 d~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~~~l~~~~ 132 (277)
T 2f1m_A 54 DPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTK 132 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCE
No 466
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=46.51 E-value=80 Score=22.81 Aligned_cols=68 Identities=19% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHH-------------------HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 010847 423 KELSSVQGQLVAERSRCFKLEAQI-------------------AELQKMLESSQTIENEVQILRQQKSAFEQEMERATSV 483 (499)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 483 (499)
+..+....++..++.+..++.... .-+.+-...++.|+++.+.+..++..+.++.+++..+
T Consensus 2 ed~~~R~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K~sK~~iL~~A~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~r 81 (88)
T 1nkp_A 2 HMNVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHK 81 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred cccCCCc
Q 010847 484 QTQGSGG 490 (499)
Q Consensus 484 q~q~~~~ 490 (499)
..+-+++
T Consensus 82 l~~L~~~ 88 (88)
T 1nkp_A 82 LEQLGGC 88 (88)
T ss_dssp HHHHCCC
T ss_pred HHHhhcC
No 467
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=46.39 E-value=86 Score=23.09 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=0.0
Q ss_pred HhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010847 394 ELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAE-RSRCFKLEAQIAELQKMLESSQTIENEVQILRQ 468 (499)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~ 468 (499)
+..+...+.+...|+..+.+.+.......+.++..-..++.+ .+-..+++++++|.+.-+.-.-.|+.|+.-+++
T Consensus 11 ~~~~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrk 86 (95)
T 3mov_A 11 ENLYFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRK 86 (95)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 468
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=46.38 E-value=46 Score=19.97 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 010847 403 ENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK 451 (499)
Q Consensus 403 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 451 (499)
...-|+.++..+++.+-.+++..|.+++-...++..+..++.++.--++
T Consensus 4 rnaylrkkiarlkkdnlqlerdeqnlekiianlrdeiarlenevasheq 52 (52)
T 3he5_B 4 RNAYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVASHEQ 52 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hhHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHHhhccC
No 469
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=46.25 E-value=20 Score=20.67 Aligned_cols=30 Identities=7% Similarity=0.122 Sum_probs=0.0
Q ss_pred hhccchHHHHHHHHHHHHHHHhhhhhhHHH
Q 010847 414 VNSTHSELSKELSSVQGQLVAERSRCFKLE 443 (499)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (499)
..+.+....+++.+++.++..++++++.||
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir~le 34 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVRALX 34 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHHhcC
No 470
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=46.21 E-value=1.9e+02 Score=27.10 Aligned_cols=145 Identities=12% Similarity=0.100 Sum_probs=0.0
Q ss_pred CC-EEEEEcccCCCCCCCceEEEEECCCCcE----EEeecCCCCCCC------------CcceEEEEECCEEEEEcCcCC
Q 010847 92 GT-KLLILGGHYKKSSDSMIVRFIDLETNLC----GVMETSGKVPVA------------RGGHSVTLVGSRLIIFGGEDR 154 (499)
Q Consensus 92 ~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W----~~~~~~g~~p~~------------r~~~~~~~~~~~lyv~GG~~~ 154 (499)
++ .+++.|+.++. +.+||+.++.. ...- ..+.. .....+..-++++++.|+
T Consensus 237 ~~~~~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--- 304 (447)
T 3dw8_B 237 NSCNTFVYSSSKGT------IRLCDMRASALCDRHSKLF---EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD--- 304 (447)
T ss_dssp SCTTEEEEEETTSC------EEEEETTTCSSSCTTCEEE---CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE---
T ss_pred CCCcEEEEEeCCCe------EEEEECcCCccccceeeEe---ccCCCccccccccccCceEEEEEECCCCCEEEEee---
Q ss_pred CCCccCcEEEEECCCCeeEEeeecCCCCCCCccce--------------------EEEEcCcEEEEEcCCCCCCCCCcEE
Q 010847 155 SRKLLNDVHFLDLETMTWDAVEVTQTPPAPRYDHS--------------------AALHANRYLIVFGGCSHSIFFNDLH 214 (499)
Q Consensus 155 ~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~--------------------~~~~~~~~l~v~GG~~~~~~~~~i~ 214 (499)
. ..+.+||+.+ .+.+......|. ++...++..++.|+.+ +.+.
T Consensus 305 ---~-~~v~iwd~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~ 367 (447)
T 3dw8_B 305 ---Y-LSVKVWDLNM--------ENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFR 367 (447)
T ss_dssp ---S-SEEEEEETTC--------CSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEE
T ss_pred ---C-CeEEEEeCCC--------CccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----CEEE
Q ss_pred EEECCCCceEecccCCCCCCcCcccE----------------------------EEEE-CCEEEEEeCCCCCCCcceEEE
Q 010847 215 VLDLQTNEWSQPEIKGDLVTGRAGHA----------------------------GITI-DENWYIVGGGDNNNGCQETIV 265 (499)
Q Consensus 215 ~~d~~~~~W~~~~~~~~~p~~r~~~~----------------------------~~~~-~~~l~v~GG~~~~~~~~~~~~ 265 (499)
+||+.+..-..+........++.... ++.. ++.++++|. .+.+++
T Consensus 368 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~------~~~~~~ 441 (447)
T 3dw8_B 368 MFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT------TNNLYI 441 (447)
T ss_dssp EEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC------SSCEEE
T ss_pred EEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe------cceeee
Q ss_pred EECCCC
Q 010847 266 LNMTKL 271 (499)
Q Consensus 266 ~d~~~~ 271 (499)
|+...+
T Consensus 442 ~~~~~n 447 (447)
T 3dw8_B 442 FQDKVN 447 (447)
T ss_dssp EECCC-
T ss_pred eccccC
No 471
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=46.05 E-value=57 Score=20.97 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=0.0
Q ss_pred HhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 010847 434 AERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQK 470 (499)
Q Consensus 434 ~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~ 470 (499)
+++..+.+|+++...+.+-+.+.|+-.++++.+.++.
T Consensus 14 aLkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~vrk~ 50 (56)
T 2w6b_A 14 ALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 50 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 472
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=45.79 E-value=1.7e+02 Score=26.34 Aligned_cols=99 Identities=7% Similarity=0.023 Sum_probs=0.0
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhh-------hhhhHHHHHHHHHHH
Q 010847 379 VRTDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAER-------SRCFKLEAQIAELQK 451 (499)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~e~~~ 451 (499)
+..-....+..+..++....+...+.......++..+..-....++++..+...+... ..+++++.++.+.++
T Consensus 100 l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~~~~ 179 (301)
T 2efk_A 100 LTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSH 179 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHHHHH
Q ss_pred HHHhHH----------------HHHHHHHHHHHhHHHHHHHH
Q 010847 452 MLESSQ----------------TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 452 ~l~~~~----------------~~~~e~~~~~~~~~~~~~~~ 477 (499)
++.... -...++..+.+.++.+++++
T Consensus 180 ~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~lee~r 221 (301)
T 2efk_A 180 MAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERR 221 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 473
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=45.72 E-value=28 Score=30.37 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 454 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 454 (499)
.+.|-..+++.++.+.+++..++++.+..+..+.++.+++..++|+.-..+
T Consensus 1 le~lnsRvd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL~d~iR 51 (233)
T 2yko_A 1 MASLRSRCDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEIWDYVK 51 (233)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 474
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=45.71 E-value=90 Score=23.13 Aligned_cols=76 Identities=9% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHH
Q 010847 400 VRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFK--LEAQIAELQKMLESSQTIENEVQILRQQKSAFEQ 475 (499)
Q Consensus 400 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~ 475 (499)
+.++...|+.+|++++.+++...+..+-+.+=...-.+.-.- -.....++.+--..+..|+.++..++.-+..++.
T Consensus 13 peqRkkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~K~q~~L~e~e~ 90 (98)
T 2ke4_A 13 PEQQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAWLAEAES 90 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 475
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=45.55 E-value=1.1e+02 Score=24.21 Aligned_cols=70 Identities=11% Similarity=0.002 Sum_probs=0.0
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHH
Q 010847 409 EKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEME 478 (499)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~ 478 (499)
..+.....-+..+...+...+..+...+.+++..+..+.+..++.+..++|.++...-.+......++.+
T Consensus 67 ~~l~~~~~fi~~L~~~I~~q~~~l~~~~~~~e~~r~~l~~a~~~~k~~e~L~er~~~~~~~~~~r~EQk~ 136 (150)
T 3ajw_A 67 NRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKK 136 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 476
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=45.16 E-value=2.2e+02 Score=27.44 Aligned_cols=81 Identities=11% Similarity=0.163 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 010847 388 EDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILR 467 (499)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~ 467 (499)
.+-..+.+.+...+.+...+...++..+.+......+.+..++.+....+.-..++..+.++.++..+.+..+.|..+++
T Consensus 349 ae~~~lrQRlddArNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a~~kek~~~~n~~a~~~~KiAE~KrK~dE~~aIK 428 (602)
T 1cii_A 349 AEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATK 428 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhhhHHHHHH
Q ss_pred H
Q 010847 468 Q 468 (499)
Q Consensus 468 ~ 468 (499)
.
T Consensus 429 D 429 (602)
T 1cii_A 429 D 429 (602)
T ss_dssp H
T ss_pred H
No 477
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=45.07 E-value=4.5 Score=39.43 Aligned_cols=83 Identities=17% Similarity=0.264 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHH-----HHHHHHhhhhhhHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhHHHHHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSV-----QGQLVAERSRCFKLEAQIAELQKMLESSQ-TIENEVQILRQQKSAFEQEM 477 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~l~~~~-~~~~e~~~~~~~~~~~~~~~ 477 (499)
.........+.+..+++.+.++.+. ++..+.+++-+++|..+..+++++++... +++++..++..++...+.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~e~~~~~~f~~~v~~~e~~l~~~e~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~ 400 (427)
T 2qag_B 321 QETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRK 400 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHhhccccc
Q 010847 478 ERATSVQTQ 486 (499)
Q Consensus 478 ~~~~~~q~q 486 (499)
.+..+.|.|
T Consensus 401 ~~~~~~~~~ 409 (427)
T 2qag_B 401 TAAELLQSQ 409 (427)
T ss_dssp ---------
T ss_pred HHHHHHhhh
No 478
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=44.92 E-value=1.1e+02 Score=23.97 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=0.0
Q ss_pred ccchhhHHHHHHHHHHHHhhhHHHH-HhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 377 KDVRTDIDAIKEDKRVLELSLTEVR-TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 377 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
+++...+..++.--+.|........ ....++...-.+++..++..+..|+.+.+.....+..-.+..-...|+.+.-+-
T Consensus 34 ~EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~Rr~f 113 (130)
T 4dnd_A 34 GEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVF 113 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHhH
Q 010847 456 SQTIENEVQILRQQK 470 (499)
Q Consensus 456 ~~~~~~e~~~~~~~~ 470 (499)
+.....++.....++
T Consensus 114 V~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 114 VERMREAVQEMKDHM 128 (130)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
No 479
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=44.86 E-value=77 Score=22.11 Aligned_cols=55 Identities=16% Similarity=0.314 Sum_probs=0.0
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKS 471 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~ 471 (499)
+..+.+..+..+..++.++++.+.++ +.+++|.+.-+.-.-.|+.|+.-+++-++
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~----------~~ql~EYq~LlniKl~Le~EIatYRkLLE 57 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARM----------QQQLDEYQELLDIKLALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 480
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=44.73 E-value=1.4e+02 Score=25.17 Aligned_cols=78 Identities=12% Similarity=0.180 Sum_probs=0.0
Q ss_pred hhhHHHHHhh-hhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q 010847 395 LSLTEVRTEN-SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAF 473 (499)
Q Consensus 395 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~ 473 (499)
..+.+.-.+- ..|...+..+.. .++...+++.++...+...+....++.....++.++.+.++++.+-....+++.+.
T Consensus 41 ~eL~~LL~~~~dlL~~~v~~l~~-~q~~~~~~e~l~s~ae~ll~l~~~Le~~r~~l~~~l~~~~~L~~~~~~k~q~~~~~ 119 (192)
T 2p22_C 41 KEIIDLIQTHRHQLELYVTKFNP-LTDFAGKIHAFRDQFKQLEENFEDLHEQKDKVQALLENARILESKYVASWQDYHSE 119 (192)
T ss_dssp HHHHHHHHHCHHHHHHHGGGGSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhChHHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 481
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=44.71 E-value=8.7 Score=29.12 Aligned_cols=65 Identities=22% Similarity=0.265 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHH------HhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHH
Q 010847 380 RTDIDAIKEDKRVL------ELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEA 444 (499)
Q Consensus 380 ~~~~~~l~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (499)
+.++..++..++.+ +....+...+...|+.++..++.+.+.+.+|...++.+++..+.+++.|..
T Consensus 30 ~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~lk~k~e~L~~ 100 (107)
T 3a5t_A 30 KEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQN 100 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSSSSCC-----
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 482
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=44.61 E-value=1.1e+02 Score=23.76 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHhhhhhhHHHHHHHHHHHHHHhHH------------HHHHHHHHHHHhHHHHHHHHHHhhcccccCCCceeee
Q 010847 433 VAERSRCFKLEAQIAELQKMLESSQ------------TIENEVQILRQQKSAFEQEMERATSVQTQGSGGVWRW 494 (499)
Q Consensus 433 ~~~~~~~~~~~~~~~e~~~~l~~~~------------~~~~e~~~~~~~~~~~~~~~~~~~~~q~q~~~~~~~~ 494 (499)
.++..+..+|+.++++++++|+.++ .|+.-+.....--+..-.++-......--.-||.|.|
T Consensus 3 ~~L~~~~~~L~~~i~~l~~~L~~lkqa~k~~~~~~~~eL~~LI~KWr~asq~aaeeLf~~~~~rv~rMGG~~~~ 76 (122)
T 3viq_A 3 MQLLSRRLKLEKEVRNLQEQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIRLAGGVTQS 76 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhh
No 483
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=44.55 E-value=16 Score=32.54 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhcccccCC
Q 010847 436 RSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQTQGS 488 (499)
Q Consensus 436 ~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~q~q~~ 488 (499)
+++....+.-+++.+..+.++++++++.+.++++++++++++.+.++......
T Consensus 137 E~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~~te~~p~~ 189 (250)
T 2ve7_C 137 EACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTVTIPSA 189 (250)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC-------------CTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHH
No 484
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=44.40 E-value=19 Score=24.17 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 412 DEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
+.....+.+++.+...+..++..++.++..|+.++..+.+.|..
T Consensus 18 ~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l~~ 61 (62)
T 1jnm_A 18 KRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMN 61 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 485
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=44.23 E-value=51 Score=19.91 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 010847 418 HSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLE 454 (499)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 454 (499)
+.+++.+..+++..+.++++|+.-++.+-+-+.|-++
T Consensus 5 l~eLE~r~k~le~~naeLEervstLq~EN~mLRqvl~ 41 (42)
T 2oqq_A 5 LSELENRVKDLENKNSELEERLSTLQNENQMLRHILK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
No 486
>1lwu_B Fibrinogen beta chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_B*
Probab=43.89 E-value=21 Score=33.11 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=0.0
Q ss_pred hHHHHHHhhccchHH-----HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHh
Q 010847 407 FREKIDEVNSTHSEL-----SKELSSVQGQLVAERSRCFKLEAQIAELQKMLES 455 (499)
Q Consensus 407 l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 455 (499)
++..|++....+++. .++++.++..++++++++++|+..+.++...+..
T Consensus 7 ~~~~le~~~~~ik~~~~~~~~~~I~~Lq~~le~L~~KI~~LE~~v~~q~~~~~~ 60 (323)
T 1lwu_B 7 AQKEIENRYKEVKIRIESTVAGSLRSMKSVLEHLRAKMQRMEEAIKTQKELCSA 60 (323)
T ss_dssp CHHHHHHHTHHHHHHHHTTTHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
No 487
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=43.86 E-value=86 Score=22.39 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 010847 388 EDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQK 451 (499)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 451 (499)
+...+-+-...+.+.+...|+..+ ..++..-+++++.+++.+...+..+.++..
T Consensus 26 EaA~Ee~YfrqkekEqL~~LKkkl----------~~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 26 EQAEEERYFRARAKEQLAALKKHK----------ENEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
No 488
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=43.44 E-value=2e+02 Score=26.68 Aligned_cols=95 Identities=6% Similarity=0.073 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHH--------------HHhhhhhhHHHHHHHHHHHH-
Q 010847 388 EDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQL--------------VAERSRCFKLEAQIAELQKM- 452 (499)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~e~~~~- 452 (499)
.+++.++..+.+...........++..+..-....++.+..+.+. ++.+.+..+....+.+.+.+
T Consensus 136 ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y 215 (350)
T 3aco_A 136 KETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKY 215 (350)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHhHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 010847 453 LESSQTIENEVQILRQQKSAFEQEMERATS 482 (499)
Q Consensus 453 l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 482 (499)
...++++++....+.+....+-+.++++..
T Consensus 216 ~~~v~~~n~~~~~~~~~~~~~~~~~Q~lee 245 (350)
T 3aco_A 216 EKSLKELDQGTPQYMENMEQVFEQCQQFEE 245 (350)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 489
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=43.36 E-value=33 Score=33.29 Aligned_cols=68 Identities=19% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHhHH---HHHHHHHHHHHhHHHHHHHHHHhhcccccCCCceeeeecC
Q 010847 428 VQGQLVAERSRCFKLEAQIAELQKMLESSQ---TIENEVQILRQQKSAFEQEMERATSVQTQGSGGVWRWIAG 497 (499)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~---~~~~e~~~~~~~~~~~~~~~~~~~~~q~q~~~~~~~~~~~ 497 (499)
..+-++.++++.++++.++.++++++.+.. +..+++.++.+|++..++.+.+++..+...++. ..|||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~lAg 315 (426)
T 1lrz_A 245 FDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNE--LPISA 315 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSE--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ceeEE
No 490
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=43.29 E-value=21 Score=24.39 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=0.0
Q ss_pred hhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHH
Q 010847 404 NSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEA 444 (499)
Q Consensus 404 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (499)
.+++...+......+.+++.++++...+++.+++.+.+++.
T Consensus 13 ~e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 13 EEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 491
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=43.12 E-value=54 Score=22.03 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHH
Q 010847 387 KEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVA 434 (499)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (499)
..++..........+.....|+.+++.++.++.++..++..+++++.+
T Consensus 15 ~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~~ 62 (63)
T 2dgc_A 15 ARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVGE 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 492
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=43.10 E-value=35 Score=24.94 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=0.0
Q ss_pred hHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHHhhccccc
Q 010847 407 FREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMERATSVQTQ 486 (499)
Q Consensus 407 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~q~q 486 (499)
+.........++..+...+....+.+..-+..+.+|.+.+...+..+..+.-|..+.+.+..--......++++.....+
T Consensus 8 ~~~~~~~~~~ei~~L~~~L~~AEeaL~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~EKe~ 87 (96)
T 3fx0_A 8 VVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKEL 87 (96)
T ss_dssp ------------------CCSSTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTSC
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
No 493
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=42.97 E-value=97 Score=29.95 Aligned_cols=96 Identities=19% Similarity=0.240 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHH
Q 010847 381 TDIDAIKEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQTIE 460 (499)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~~~ 460 (499)
+.+..+.++...+.+.+..-..... -.++.++..+..+...++++++.+.-+..+++-+ ..-++.++-..+..++.
T Consensus 2 ld~~~~r~~~~~~~~~~~~r~~~~~--~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~--~~~~~~~~l~~~~~~~~ 77 (421)
T 1ses_A 2 VDLKRLRQEPEVFHRAIREKGVALD--LEALLALDREVQELKKRLQEVQTERNQVAKRVPK--APPEEKEALIARGKALG 77 (421)
T ss_dssp CCHHHHHHCHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS--SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhCHHHHHHHHHHhCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccccHHHHHHHHHHHH
Q ss_pred HHHHHHHHhHHHHHHHHHHh
Q 010847 461 NEVQILRQQKSAFEQEMERA 480 (499)
Q Consensus 461 ~e~~~~~~~~~~~~~~~~~~ 480 (499)
+++..+.+++.++++++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 78 EEAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
No 494
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=42.95 E-value=70 Score=24.91 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhHHHHHhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHH
Q 010847 387 KEDKRVLELSLTEVRTENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEA 444 (499)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (499)
+.+++.+.+...+...+...|+.++.+++..+.+.+.-++++-.+.+.++-...+...
T Consensus 3 ~~e~~~~~~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq~~~~~~~~ 60 (125)
T 1joc_A 3 QDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQALN 60 (125)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCC
No 495
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=42.93 E-value=85 Score=22.06 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHHhHH----------------HHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 010847 431 QLVAERSRCFKLEAQIAELQKMLESSQ----------------TIENEVQILRQQKSAFEQEMERATSVQT 485 (499)
Q Consensus 431 ~~~~~~~~~~~~~~~~~e~~~~l~~~~----------------~~~~e~~~~~~~~~~~~~~~~~~~~~q~ 485 (499)
.++++++.+...|.+|..-.++|+... ....+...++..+.++.+++-++.+.++
T Consensus 6 ~l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~~~~~R~~~V~~lq~Ki~elkrqlAd~va~~k 76 (78)
T 2ic6_A 6 TLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLIAAQK 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
No 496
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=42.76 E-value=55 Score=28.53 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=0.0
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 010847 432 LVAERSRCFKLEAQIAELQKMLESSQTIENEVQILRQQKSAFEQEMER 479 (499)
Q Consensus 432 ~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~ 479 (499)
++.+..|+.++|.++.+++..+.++.+.+++.+...++.+...+++++
T Consensus 1 le~lnsRvd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL~d 48 (233)
T 2yko_A 1 MASLRSRCDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEIWD 48 (233)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 497
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=42.55 E-value=76 Score=21.41 Aligned_cols=57 Identities=23% Similarity=0.179 Sum_probs=0.0
Q ss_pred HhhhhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHH
Q 010847 402 TENSRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESSQT 458 (499)
Q Consensus 402 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~~ 458 (499)
.+..+|..++.+.+.++..+..-+.+++..+.+--+--.+|+.+.+-.++....+.+
T Consensus 3 kQNKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k 59 (74)
T 2q6q_A 3 QQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEK 59 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh
No 498
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=42.39 E-value=2.4e+02 Score=27.14 Aligned_cols=224 Identities=13% Similarity=-0.023 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCCCCCceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEc---CcCCCCCccCcEEEEECC
Q 010847 92 GTKLLILGGHYKKSSDSMIVRFIDLETNLCGVMETSGKVPVARGGHSVTLVGSRLIIFG---GEDRSRKLLNDVHFLDLE 168 (499)
Q Consensus 92 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~G---G~~~~~~~~~~v~~yd~~ 168 (499)
++.+|+.-....... +.+.++|+.+++-...-..|..| +....--+..||+.- +....+...+.+..+|+.
T Consensus 84 ~~~vyV~n~~~~~~~--~~VsVID~~t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI--TQQFVIDGSTGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TTEEEEEECTTTCSS--EEEEEEETTTTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEECCCcCCCC--CeEEEEECCCCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Q ss_pred CCeeEEeeecCCCCC----CCccceEEEEcCcEEEEEcCCCCCCCCCcEEEEECCCCceEecccCCCC----CCcCcccE
Q 010847 169 TMTWDAVEVTQTPPA----PRYDHSAALHANRYLIVFGGCSHSIFFNDLHVLDLQTNEWSQPEIKGDL----VTGRAGHA 240 (499)
Q Consensus 169 t~~W~~~~~~~~~p~----~r~~~~~~~~~~~~l~v~GG~~~~~~~~~i~~~d~~~~~W~~~~~~~~~----p~~r~~~~ 240 (499)
+++-..--..+..+. ..-......-+++++|+. +....+.+.++|+.+.+-..--..+.. |.....+.
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~----n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v 233 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFY----QFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFY 233 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEE----ECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEE----ecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEE
Q ss_pred EEEECCEEEEEeCCCCCCCc---------------------------------ceEEEEECCCCceEEeccCCCCCCCC-
Q 010847 241 GITIDENWYIVGGGDNNNGC---------------------------------QETIVLNMTKLAWSILTSVKGRNPLA- 286 (499)
Q Consensus 241 ~~~~~~~l~v~GG~~~~~~~---------------------------------~~~~~~d~~~~~W~~l~~~~~~~p~~- 286 (499)
+..-+++++++-- ...... ..++++|.....-..+...+......
T Consensus 234 ~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 234 MNCRDGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEETTSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEcCCCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Q ss_pred ----CCCCceEEEEEcCceEEEEE-----cCCCCCCCceEEEEECCCCC
Q 010847 287 ----SEGLSVCSAIIEGEHHLVAF-----GGYNGKYNNEVFVMRLKPRD 326 (499)
Q Consensus 287 ----~~~~~~~~~~~~~~~~l~v~-----GG~~~~~~~~~~~~~~~~~~ 326 (499)
+.+.........+...+||. -|......++++++|+.+.+
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
No 499
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=42.26 E-value=78 Score=24.53 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=0.0
Q ss_pred hhhHHHHHHhhccchHHHHHHHHHHHHHHHhhhhhhH----------HHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHH
Q 010847 405 SRFREKIDEVNSTHSELSKELSSVQGQLVAERSRCFK----------LEAQIAELQKMLESSQTIENEVQILRQQKSAFE 474 (499)
Q Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~e~~~~l~~~~~~~~e~~~~~~~~~~~~ 474 (499)
..+.......+..+.+++++...+...+..+.+.-.+ ++..+.-.+.+|..+..++.++..++.+...++
T Consensus 2 ~kl~~~~~~l~~KvAElekkv~~lek~lk~~~e~d~e~y~ke~~~~~~qsele~k~aeLe~leeL~~ki~eL~~kvA~le 81 (125)
T 2pms_C 2 SHMDAEEVAPQAKIAELENQVHRLEQELKEIDESESEDYAKEGFRAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLE 81 (125)
T ss_dssp CCCHHHHHSHHHHHHHHHHHHHHHHHHTTTTCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q ss_pred HHHHHhh
Q 010847 475 QEMERAT 481 (499)
Q Consensus 475 ~~~~~~~ 481 (499)
.++..+.
T Consensus 82 ~e~~~~e 88 (125)
T 2pms_C 82 DQLKAAE 88 (125)
T ss_dssp HHHHCCC
T ss_pred HHHHHHH
No 500
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=42.17 E-value=48 Score=23.54 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhH
Q 010847 418 HSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESS 456 (499)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~ 456 (499)
+.+...=+..++++.+.+.+..+.++.+..+++++|+++
T Consensus 42 L~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 42 LTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Done!