Your job contains 1 sequence.
>010849
MAPPSSSINHISNPCVYERKSRFMKWLSKLFKSTGSNRGGGGGSTSGRHHPQFLGEESMV
WPAPRRSLDDRSRADREKEELDHAIALSLAEDLKRPNGQRWRSNTDEDYAWALQDSQLNP
SFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLS
GKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSC
ERLESWNTRYYSLEDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLL
VERQALNEAIVGEKNGYHHMPETRGLCLSEEQTVTSILRRPRIGGNRLVGMRTQPQKLTR
KCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEV
LPDYRNMPSTSSASTSSSSSKKGGKSEVEKKLGEFFMHQIAHDASPAYGEGFRIANAAVN
KYGLRRTLEHIRLTGNFPL
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010849
(499 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063932 - symbol:DAR2 "DA1-related protein 2" ... 1854 2.5e-191 1
TAIR|locus:2115290 - symbol:AT4G36860 species:3702 "Arabi... 1359 6.2e-142 2
TAIR|locus:2202175 - symbol:DA1 "DA1" species:3702 "Arabi... 1289 1.9e-131 1
TAIR|locus:2154880 - symbol:DAR6 "DA1-related protein 6" ... 863 2.6e-86 1
TAIR|locus:2170338 - symbol:DAR4 "DA1-related protein 4" ... 853 4.1e-84 1
TAIR|locus:2154890 - symbol:DAR5 "DA1-related protein 5" ... 787 3.0e-78 1
DICTYBASE|DDB_G0291251 - symbol:limD "LIM-type zinc finge... 156 7.2e-08 1
UNIPROTKB|D4A6Z5 - symbol:D4A6Z5 "Uncharacterized protein... 138 9.6e-07 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 130 3.6e-06 1
MGI|MGI:102784 - symbol:Tgfb1i1 "transforming growth fact... 138 3.6e-06 1
RGD|620173 - symbol:Tgfb1i1 "transforming growth factor b... 138 3.6e-06 1
UNIPROTKB|Q99PD6 - symbol:Tgfb1i1 "Transforming growth fa... 138 3.6e-06 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 135 5.9e-06 1
UNIPROTKB|F1LWK7 - symbol:F1LWK7 "Uncharacterized protein... 138 6.1e-06 1
UNIPROTKB|F1LX72 - symbol:F1LX72 "Uncharacterized protein... 138 6.8e-06 1
UNIPROTKB|O43294 - symbol:TGFB1I1 "Transforming growth fa... 135 7.8e-06 1
UNIPROTKB|F1LWZ5 - symbol:F1LWZ5 "Uncharacterized protein... 138 7.8e-06 1
UNIPROTKB|H0Y3K7 - symbol:ABLIM1 "Actin-binding LIM prote... 137 7.9e-06 1
UNIPROTKB|Q5T6N2 - symbol:ABLIM1 "Actin-binding LIM prote... 137 8.7e-06 1
MGI|MGI:1194500 - symbol:Ablim1 "actin-binding LIM protei... 138 8.9e-06 1
UNIPROTKB|F8W8M4 - symbol:ABLIM1 "Actin-binding LIM prote... 137 9.0e-06 1
UNIPROTKB|Q3MHZ4 - symbol:TGFB1I1 "Transforming growth fa... 134 9.8e-06 1
UNIPROTKB|E2RTE0 - symbol:TGFB1I1 "Uncharacterized protei... 134 1.0e-05 1
UNIPROTKB|O14639 - symbol:ABLIM1 "Actin-binding LIM prote... 137 1.0e-05 1
UNIPROTKB|J9P5B6 - symbol:ABLIM1 "Uncharacterized protein... 136 1.0e-05 1
MGI|MGI:1341092 - symbol:Fhl3 "four and a half LIM domain... 130 1.1e-05 1
UNIPROTKB|Q5T6N4 - symbol:ABLIM1 "Actin-binding LIM prote... 137 1.1e-05 1
UNIPROTKB|F1PWQ6 - symbol:ABLIM1 "Uncharacterized protein... 136 1.3e-05 1
UNIPROTKB|F1MI97 - symbol:F1MI97 "Uncharacterized protein... 136 1.3e-05 1
UNIPROTKB|F1S4V5 - symbol:ABLIM1 "Uncharacterized protein... 136 1.3e-05 1
RGD|1307180 - symbol:Fhl3 "four and a half LIM domains 3"... 128 1.8e-05 1
UNIPROTKB|E1BS96 - symbol:E1BS96 "Uncharacterized protein... 134 1.9e-05 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 130 2.1e-05 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 130 2.1e-05 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 130 2.1e-05 1
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 130 2.1e-05 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 125 2.3e-05 1
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 127 4.6e-05 1
UNIPROTKB|E7EMK8 - symbol:PXN "Paxillin" species:9606 "Ho... 127 4.7e-05 1
UNIPROTKB|F1MFD1 - symbol:PXN "Uncharacterized protein" s... 129 5.1e-05 1
UNIPROTKB|F1MZP2 - symbol:LPXN "Uncharacterized protein" ... 126 5.6e-05 1
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 126 6.1e-05 1
UNIPROTKB|E2QZZ9 - symbol:LHX3 "Uncharacterized protein" ... 125 7.6e-05 1
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 125 7.6e-05 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 125 7.8e-05 1
UNIPROTKB|L7N0D8 - symbol:LHX3 "Uncharacterized protein" ... 125 7.8e-05 1
ZFIN|ZDB-GENE-030131-874 - symbol:si:dkey-23o10.3 "si:dke... 128 8.1e-05 1
ZFIN|ZDB-GENE-070112-1122 - symbol:ablim3 "actin binding ... 128 8.1e-05 1
RGD|1305759 - symbol:Pxn "paxillin" species:10116 "Rattus... 127 8.4e-05 1
UNIPROTKB|Q66H76 - symbol:Pxn "Paxillin" species:10116 "R... 127 8.4e-05 1
UNIPROTKB|F5GZ78 - symbol:PXN "Paxillin" species:9606 "Ho... 127 8.5e-05 1
UNIPROTKB|F1PUT6 - symbol:PXN "Uncharacterized protein" s... 127 8.5e-05 1
UNIPROTKB|P49023 - symbol:PXN "Paxillin" species:9606 "Ho... 127 8.5e-05 1
MGI|MGI:108295 - symbol:Pxn "paxillin" species:10090 "Mus... 127 8.5e-05 1
UNIPROTKB|F1M1Z5 - symbol:Pxn "Paxillin" species:10116 "R... 127 8.5e-05 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 124 9.7e-05 1
UNIPROTKB|F1SV27 - symbol:FHL3 "Uncharacterized protein" ... 121 0.00010 1
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 123 0.00013 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 123 0.00013 1
DICTYBASE|DDB_G0274109 - symbol:paxB "paxillin" species:4... 125 0.00013 1
UNIPROTKB|Q3ZBI6 - symbol:FHL3 "Four and a half LIM domai... 120 0.00014 1
UNIPROTKB|F1NC68 - symbol:Gga.10869 "Uncharacterized prot... 125 0.00015 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 122 0.00015 1
UNIPROTKB|Q179D0 - symbol:AAEL005667 "AAEL005667-PA" spec... 128 0.00016 1
UNIPROTKB|Q13643 - symbol:FHL3 "Four and a half LIM domai... 119 0.00018 1
UNIPROTKB|B0WXP3 - symbol:CpipJ_CPIJ012054 "LIM domain-bi... 131 0.00018 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 120 0.00024 1
UNIPROTKB|E2QXW5 - symbol:FHL3 "Uncharacterized protein" ... 118 0.00025 1
UNIPROTKB|Q1LZ94 - symbol:LMO2 "Rhombotin-2" species:9913... 108 0.00025 1
UNIPROTKB|P25791 - symbol:LMO2 "Rhombotin-2" species:9606... 108 0.00025 1
UNIPROTKB|F1SGS5 - symbol:LMO2 "Uncharacterized protein" ... 108 0.00025 1
MGI|MGI:102811 - symbol:Lmo2 "LIM domain only 2" species:... 108 0.00025 1
RGD|1307101 - symbol:Lmo2 "LIM domain only 2" species:101... 108 0.00025 1
UNIPROTKB|E2QUL4 - symbol:LPXN "Uncharacterized protein" ... 120 0.00026 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 120 0.00027 1
UNIPROTKB|F1NB68 - symbol:PXN "Paxillin" species:9031 "Ga... 122 0.00028 1
UNIPROTKB|P49024 - symbol:PXN "Paxillin" species:9031 "Ga... 122 0.00028 1
ZFIN|ZDB-GENE-031219-1 - symbol:fhl1b "four and a half LI... 117 0.00030 1
ZFIN|ZDB-GENE-040105-1 - symbol:pxn "paxillin" species:79... 121 0.00033 1
WB|WBGene00006407 - symbol:lim-9 species:6239 "Caenorhabd... 122 0.00035 1
UNIPROTKB|I3LNC5 - symbol:LPXN "Uncharacterized protein" ... 117 0.00039 1
UNIPROTKB|E2R5M1 - symbol:FBLIM1 "Uncharacterized protein... 118 0.00041 1
UNIPROTKB|F1N6Q2 - symbol:F1N6Q2 "Uncharacterized protein... 121 0.00041 1
UNIPROTKB|F5GZL6 - symbol:ABLIM2 "Actin-binding LIM prote... 120 0.00043 1
WB|WBGene00012379 - symbol:Y1A5A.1 species:6239 "Caenorha... 111 0.00045 1
UNIPROTKB|F5GYR0 - symbol:ABLIM2 "Actin-binding LIM prote... 120 0.00048 1
UNIPROTKB|F8W6D8 - symbol:ABLIM2 "Actin-binding LIM prote... 120 0.00048 1
UNIPROTKB|Q6H8Q1 - symbol:ABLIM2 "Actin-binding LIM prote... 120 0.00052 1
MGI|MGI:1921452 - symbol:Fblim1 "filamin binding LIM prot... 117 0.00053 1
UNIPROTKB|Q1JQB5 - symbol:FBLIM1 "Filamin-binding LIM pro... 117 0.00054 1
UNIPROTKB|E9PF39 - symbol:ABLIM2 "Actin-binding LIM prote... 120 0.00056 1
ZFIN|ZDB-GENE-050327-91 - symbol:ablim1b "actin binding L... 121 0.00056 1
WB|WBGene00016197 - symbol:pxl-1 species:6239 "Caenorhabd... 117 0.00063 1
UNIPROTKB|Q09476 - symbol:pxl-1 "Paxillin homolog 1" spec... 117 0.00063 1
UNIPROTKB|Q5REN1 - symbol:FBLIM1 "Filamin-binding LIM pro... 116 0.00069 1
UNIPROTKB|F1PCZ6 - symbol:ABLIM2 "Uncharacterized protein... 119 0.00072 1
UNIPROTKB|B7Z5P7 - symbol:LPXN "cDNA FLJ51550, highly sim... 115 0.00085 1
UNIPROTKB|O60711 - symbol:LPXN "Leupaxin" species:9606 "H... 115 0.00093 1
>TAIR|locus:2063932 [details] [associations]
symbol:DAR2 "DA1-related protein 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010088 "phloem development" evidence=IMP] [GO:0048364 "root
development" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0048364 Gene3D:2.10.110.10 PROSITE:PS50330 GO:GO:0010088
GO:GO:0043130 EMBL:AC003000 HOGENOM:HOG000239946 InterPro:IPR022087
Pfam:PF12315 EMBL:AK227895 IPI:IPI00530198 PIR:T01013
RefSeq:NP_181513.3 UniGene:At.37124 ProteinModelPortal:Q0WSN2
SMR:Q0WSN2 PaxDb:Q0WSN2 PRIDE:Q0WSN2 EnsemblPlants:AT2G39830.1
GeneID:818570 KEGG:ath:AT2G39830 TAIR:At2g39830 eggNOG:NOG239417
InParanoid:Q0WSN2 OMA:CKHEIGH PhylomeDB:Q0WSN2
ProtClustDB:CLSN2702284 Genevestigator:Q0WSN2 Uniprot:Q0WSN2
Length = 528
Score = 1854 (657.7 bits), Expect = 2.5e-191, P = 2.5e-191
Identities = 343/489 (70%), Positives = 381/489 (77%)
Query: 18 ERKSRFMKWLSKLFKXXXXXXXXXXXXXXXXHHPQFLGEESMVWXXXXXXXXXXXXXXXE 77
++K + MKW+SKLFK H PQF +E+MV+ +
Sbjct: 43 DKKWKLMKWVSKLFKSGSNGGGSGAHTNH--HPPQFQEDENMVFPLPPSSLDDRSRGARD 100
Query: 78 KEELDHAIALSLAEDLKRPNGQRWRSNTDEDYAWALQDSQLNPS--FPPYDPSHYYPRSY 135
KEELD +I+LSLA++ KRP+G W + + D+ LNPS PPY+PS+ Y R
Sbjct: 101 KEELDRSISLSLADNTKRPHGYGWSMDNNRDFPRPFHGG-LNPSSFIPPYEPSYQYRRRQ 159
Query: 136 KVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTH 195
++CGGCN DIG GNYLGCMGT+FHP CFRC SCGY ITEHEFSLSG PYHK CFKELTH
Sbjct: 160 RICGGCNSDIGSGNYLGCMGTFFHPECFRCHSCGYAITEHEFSLSGTKPYHKLCFKELTH 219
Query: 196 PKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLED 255
PKCEVCH +IPTN AGLIEYRCHPFW QKYCPSHE+D T+RCCSCERLESW+ RYY+LED
Sbjct: 220 PKCEVCHHFIPTNDAGLIEYRCHPFWNQKYCPSHEYDKTARCCSCERLESWDVRYYTLED 279
Query: 256 GRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNEAIVGEKN 315
GRSLCLECME+AI DTG+CQPLYHAIRDYYEGM MKLDQQIPMLLV+R+ALN+AIVGEKN
Sbjct: 280 GRSLCLECMETAITDTGECQPLYHAIRDYYEGMYMKLDQQIPMLLVQREALNDAIVGEKN 339
Query: 316 GYHHMPETRGLCLSEEQTVTSILRRPRIGGNRLVGMRTQPQKLTRKCEVTAILVLYGLPR 375
GYHHMPETRGLCLSEEQTVTS+LRRPR+G +RLVGMRTQPQ+LTRKCEVTAILVLYGLPR
Sbjct: 340 GYHHMPETRGLCLSEEQTVTSVLRRPRLGAHRLVGMRTQPQRLTRKCEVTAILVLYGLPR 399
Query: 376 LLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVL--PDYRNMPXXXXX 433
LLTGAILAHELMHGWLRL G+RNLNPEVEEGICQVLSYMWLESEVL P RN+P
Sbjct: 400 LLTGAILAHELMHGWLRLNGFRNLNPEVEEGICQVLSYMWLESEVLSDPSTRNLPSTSSV 459
Query: 434 XXXXXXXXXXXX---XEVEKKLGEFFMHQIAHDASPAYGEGFRIANAAVNKYGLRRTLEH 490
VEKKLGEFF HQIAHDASPAYG GFR ANAA KYGLRRTL+H
Sbjct: 460 ATSSSSSFSNKKGGKSNVEKKLGEFFKHQIAHDASPAYGGGFRAANAAACKYGLRRTLDH 519
Query: 491 IRLTGNFPL 499
IRLTG FPL
Sbjct: 520 IRLTGTFPL 528
>TAIR|locus:2115290 [details] [associations]
symbol:AT4G36860 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:AL161590 GO:GO:0043130 EMBL:Z99708
HOGENOM:HOG000239946 InterPro:IPR022087 Pfam:PF12315 EMBL:AY062599
EMBL:AY114659 IPI:IPI00523439 PIR:C85435 RefSeq:NP_195404.6
UniGene:At.43898 HSSP:P25801 ProteinModelPortal:Q8W4F0 SMR:Q8W4F0
IntAct:Q8W4F0 PaxDb:Q8W4F0 PRIDE:Q8W4F0 EnsemblPlants:AT4G36860.1
GeneID:829839 KEGG:ath:AT4G36860 TAIR:At4g36860 eggNOG:NOG314122
OMA:CQPLYLE Genevestigator:Q8W4F0 Uniprot:Q8W4F0
Length = 553
Score = 1359 (483.5 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 254/419 (60%), Positives = 310/419 (73%)
Query: 91 EDLKRPNGQRWRSNTDEDYAWALQDSQLNPSFPP-YDPSHY---YP----RSYKVCGGCN 142
E+++R Q DE A ALQ+S +N PP YDP + YP S+++C GC
Sbjct: 139 EEMRRSKAQL---EEDELLAKALQES-MNVGSPPRYDPGNILQPYPFLIPSSHRICVGCQ 194
Query: 143 CDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPKCEVCH 202
+IG+G +L CMG +HP CF C +C PI ++EFS+SG PYHK C+KE HPKC+VCH
Sbjct: 195 AEIGHGRFLSCMGGVWHPECFCCNACDKPIIDYEFSMSGNRPYHKLCYKEQHHPKCDVCH 254
Query: 203 QYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGRSLCLE 262
+IPTN AGLIEYR HPFW QKYCPSHE D T RCCSCER+E +T+Y L+DGR LCLE
Sbjct: 255 NFIPTNPAGLIEYRAHPFWMQKYCPSHERDGTPRCCSCERMEPKDTKYLILDDGRKLCLE 314
Query: 263 CMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNEAIVGEKNGYHHMPE 322
C++SAIMDT +CQPLY IR++YEG++MK++QQIPMLLVER ALNEA+ GEK+G+HH+PE
Sbjct: 315 CLDSAIMDTHECQPLYLEIREFYEGLHMKVEQQIPMLLVERSALNEAMEGEKHGHHHLPE 374
Query: 323 TRGLCLSEEQTVTSILRRPRIG-GNRLVGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAI 381
TRGLCLSEEQTVT++LRRPRIG G +L+ M T+P +L R+CEVTAIL+LYGLPRLLTG+I
Sbjct: 375 TRGLCLSEEQTVTTVLRRPRIGAGYKLIDMITEPCRLIRRCEVTAILILYGLPRLLTGSI 434
Query: 382 LAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVLPDYR--NMPXXXXXXXXXXX 439
LAHE+MH WLRL GY NL PEVEEGICQVL++MWLESE ++
Sbjct: 435 LAHEMMHAWLRLNGYPNLRPEVEEGICQVLAHMWLESETYAGSTLVDIASSSSSAVVSAS 494
Query: 440 XXXXXXXEVEKKLGEFFMHQIAHDASPAYGEGFRIANAAVNKYGLRRTLEHIRLTGNFP 498
+ EKKLGEFF HQI D+S AYG+GFR N AV K+GLRRTL+HIRLTG FP
Sbjct: 495 SKKGERSDFEKKLGEFFKHQIESDSSSAYGDGFRQGNQAVLKHGLRRTLDHIRLTGTFP 553
Score = 50 (22.7 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 77 EKEELDHAIALSLAEDL----KRPNGQR---WRSNTDED 108
+KEE++ AIALSL+E + G++ ++S T+ED
Sbjct: 43 DKEEIECAIALSLSEQEHVIPQDDKGKKIIEYKSETEED 81
>TAIR|locus:2202175 [details] [associations]
symbol:DA1 "DA1" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA;IPI]
[GO:0046621 "negative regulation of organ growth" evidence=IMP]
[GO:0048317 "seed morphogenesis" evidence=IMP] [GO:0048482 "ovule
morphogenesis" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
GO:GO:0046621 EMBL:AC069143 GO:GO:0043130 EMBL:BX816571
IPI:IPI00540867 PIR:D86326 RefSeq:NP_173361.1 UniGene:At.21826
ProteinModelPortal:P0C7Q8 SMR:P0C7Q8 STRING:P0C7Q8 PRIDE:P0C7Q8
EnsemblPlants:AT1G19270.1 GeneID:838510 KEGG:ath:AT1G19270
TAIR:At1g19270 eggNOG:NOG312886 HOGENOM:HOG000239946 OMA:YHPKCDV
PhylomeDB:P0C7Q8 ProtClustDB:CLSN2914207 Genevestigator:P0C7Q8
GO:GO:0048482 GO:GO:0048317 InterPro:IPR022087 Pfam:PF12315
Uniprot:P0C7Q8
Length = 532
Score = 1289 (458.8 bits), Expect = 1.9e-131, P = 1.9e-131
Identities = 234/431 (54%), Positives = 303/431 (70%)
Query: 82 DHAIALSLAEDLKRPNGQRWRSNTDEDYAWALQDSQLNPSFPPYDPSH-------YYPR- 133
D +A +L E + N R +S + D A L + Y + YYPR
Sbjct: 103 DEQLARALQESMVVGNSPRHKSGSTYDNGNAYGAGDLYGNGHMYGGGNVYANGDIYYPRP 162
Query: 134 -----SYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKS 188
+++C GCN +IG+G +L C+ + +HP CFRC C PI+E+EFS SG P+HK+
Sbjct: 163 ITFQMDFRICAGCNMEIGHGRFLNCLNSLWHPECFRCYGCSQPISEYEFSTSGNYPFHKA 222
Query: 189 CFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNT 248
C++E HPKC+VC +IPTN AGLIEYR HPFW QKYCPSHEHD T RCCSCER+E NT
Sbjct: 223 CYRERYHPKCDVCSHFIPTNHAGLIEYRAHPFWVQKYCPSHEHDATPRCCSCERMEPRNT 282
Query: 249 RYYSLEDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNE 308
RY L DGR LCLEC++SA+MDT CQPLY I+++YEG+NMK++Q++P+LLVERQALNE
Sbjct: 283 RYVELNDGRKLCLECLDSAVMDTMQCQPLYLQIQNFYEGLNMKVEQEVPLLLVERQALNE 342
Query: 309 AIVGEKNGYHHMPETRGLCLSEEQTVTSILRRPRIGGNRLVGMRTQPQKLTRKCEVTAIL 368
A GEKNG++HMPETRGLCLSEEQTV+++ +R + G + G T+P KLTR+CEVTAIL
Sbjct: 343 AREGEKNGHYHMPETRGLCLSEEQTVSTVRKRSKHGTGKWAGNITEPYKLTRQCEVTAIL 402
Query: 369 VLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVLPDYRNMP 428
+L+GLPRLLTG+ILAHE+MH W+RLKG+R L+ +VEEGICQV+++ WL++E+ N
Sbjct: 403 ILFGLPRLLTGSILAHEMMHAWMRLKGFRTLSQDVEEGICQVMAHKWLDAELAAGSTNS- 461
Query: 429 XXXXXXXXXXXXXXXXXXEVEKKLGEFFMHQIAHDASPAYGEGFRIANAAVNKYGLRRTL 488
+ E+KLGEFF HQI DASP YG+GFR AV+KYGLR+TL
Sbjct: 462 NAASSSSSSQGLKKGPRSQYERKLGEFFKHQIESDASPVYGDGFRAGRLAVHKYGLRKTL 521
Query: 489 EHIRLTGNFPL 499
EHI++TG FP+
Sbjct: 522 EHIQMTGRFPV 532
>TAIR|locus:2154880 [details] [associations]
symbol:DAR6 "DA1-related protein 6" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00142 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0043130 HOGENOM:HOG000239946
InterPro:IPR022087 Pfam:PF12315 EMBL:AB013389 IPI:IPI00527859
RefSeq:NP_201463.1 UniGene:At.55715 ProteinModelPortal:Q9FJX8
SMR:Q9FJX8 PaxDb:Q9FJX8 PRIDE:Q9FJX8 EnsemblPlants:AT5G66620.1
GeneID:836794 KEGG:ath:AT5G66620 TAIR:At5g66620 eggNOG:NOG257706
InParanoid:Q9FJX8 OMA:VQESLNM PhylomeDB:Q9FJX8
ProtClustDB:CLSN2686855 Genevestigator:Q9FJX8 Uniprot:Q9FJX8
Length = 644
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 172/366 (46%), Positives = 228/366 (62%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFS---LSGKDPYHKSCFKEL 193
+CGGCN + +G + +G +HP CF CR+C PI H+ + + +HKSC++
Sbjct: 285 LCGGCNFAVEHGGSVNILGVLWHPGCFCCRACHKPIAIHDIENHVSNSRGKFHKSCYERY 344
Query: 194 THPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSL 253
C VC + + Y HPFW ++YCP HE D T +CCSCERLE + Y L
Sbjct: 345 ----CYVCKE------KKMKTYNNHPFWEERYCPVHEADGTPKCCSCERLEPRESNYVML 394
Query: 254 EDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNEAIVGE 313
DGR LCLECM SA+MD+ +CQPL+ +RD++EG+NMK++++ P LLVE+QALN+A E
Sbjct: 395 ADGRWLCLECMNSAVMDSDECQPLHFDMRDFFEGLNMKIEKEFPFLLVEKQALNKAEKEE 454
Query: 314 KNGYHHMPETRGLCLSEEQTVTSILRRPRIG-GNRLVGMRTQPQKLTRKCEVTAILVLYG 372
K Y + TRG+CLSEEQ V S+ +RP G N+LVGM T+ QK+TR+CEVTAIL+LYG
Sbjct: 455 KIDYQYEVVTRGICLSEEQIVDSVSQRPVRGPNNKLVGMATESQKVTRECEVTAILILYG 514
Query: 373 LPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVLP------DYRN 426
LPRLLTG ILAHE+MH +LRL G+RNLN +EEGICQVL ++WL+S+ D +
Sbjct: 515 LPRLLTGYILAHEMMHAYLRLNGHRNLNNILEEGICQVLGHLWLDSQTYATADATADASS 574
Query: 427 MPXXXXXXXXXXXXXXXXX-XEVEKKLGEFFMHQIAHDASPAYGEGFRIANAAVNKYGLR 485
+ +KKL EF +QI D SP YG GFR N V L+
Sbjct: 575 SASSSSRTPPAASASKKGEWSDFDKKLVEFCKNQIETDDSPVYGLGFRTVNEMVTNSSLQ 634
Query: 486 RTLEHI 491
TL+ I
Sbjct: 635 ETLKEI 640
>TAIR|locus:2170338 [details] [associations]
symbol:DAR4 "DA1-related protein 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0006952 "defense response" evidence=IEA;ISS;IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IMP] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00412
InterPro:IPR000767 InterPro:IPR001781 InterPro:IPR002182
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS00142 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0009409
GO:GO:0008270 GO:GO:0043531 Gene3D:2.10.110.10 EMBL:AB011480
InterPro:IPR022087 Pfam:PF12315 EMBL:AY079160 IPI:IPI00538116
RefSeq:NP_197291.2 UniGene:At.43401 ProteinModelPortal:Q9FKN7
SMR:Q9FKN7 STRING:Q9FKN7 PRIDE:Q9FKN7 EnsemblPlants:AT5G17890.1
GeneID:831657 KEGG:ath:AT5G17890 TAIR:At5g17890 eggNOG:NOG263350
HOGENOM:HOG000115011 InParanoid:Q9FKN8 OMA:VNIICEE PhylomeDB:Q9FKN7
Genevestigator:Q9FKN7 InterPro:IPR011713 Pfam:PF07725
Uniprot:Q9FKN7
Length = 1613
Score = 853 (305.3 bits), Expect = 4.1e-84, P = 4.1e-84
Identities = 188/426 (44%), Positives = 248/426 (58%)
Query: 77 EKEELDHAIALSLAEDLKRPNGQRWRSNTDEDYAWALQDSQLNPSFPPYDPSHYYPRSYK 136
EKEE H+ + E + + G+R D+D A + Q+ S + P S
Sbjct: 1185 EKEERRHSKDYVIEELVLKGKGKR--KQLDDDKAD--EKEQIKHSKDHVEEEVNPPLSK- 1239
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFS-LSGKDPYHKSCFKELTH 195
C C I G + G+ +HP CF C C PI +E S L G YHK C+KEL H
Sbjct: 1240 -CKDCKSAIEDGISINAYGSVWHPQCFCCLRCREPIAMNEISDLRGM--YHKPCYKELRH 1296
Query: 196 PKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLED 255
P C VC + IP GL +Y HPFW + YCPSH+ D T +CCSCERLE T+Y L D
Sbjct: 1297 PNCYVCEKKIPRTAEGL-KYHEHPFWMETYCPSHDGDGTPKCCSCERLEHCGTQYVMLAD 1355
Query: 256 GRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNEAIVGEK- 314
R LC ECM+SAIMD+ +CQPL+ IR+++EG++MK++++ P+ LVE+ ALN+A EK
Sbjct: 1356 FRWLCRECMDSAIMDSDECQPLHFEIREFFEGLHMKIEEEFPVYLVEKNALNKAEKEEKI 1415
Query: 315 --NGYHHMPETRGLCLSEEQTVTSILRRPRIGGNR-LVGMRTQPQKLTRKCEVTAILVLY 371
G + RG+CLSEEQ VTS+ + R N+ ++ T+ Q++ RKCEVTAIL+LY
Sbjct: 1416 DKQGDQCLMVVRGICLSEEQIVTSVSQGVRRMLNKQILDTVTESQRVVRKCEVTAILILY 1475
Query: 372 GLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVLP-DYRNMPXX 430
GLPRLLTG ILAHE+MH +LRL GYRNLN +EEG+CQVL YMWLE + D +
Sbjct: 1476 GLPRLLTGYILAHEMMHAYLRLNGYRNLNMVLEEGLCQVLGYMWLECQTYVFDTATIASS 1535
Query: 431 XXXXXXXXXXXXXXX---XEVEKKLGEFFMHQIAHDASPAYGEGFRIANA--AVNKYGLR 485
+ EK+L F HQI D SP +G+GFR N A N + L+
Sbjct: 1536 SSSSRTPLSTTTSKKVDPSDFEKRLVNFCKHQIETDESPFFGDGFRKVNKMMASNNHSLK 1595
Query: 486 RTLEHI 491
TL+ I
Sbjct: 1596 DTLKEI 1601
>TAIR|locus:2154890 [details] [associations]
symbol:DAR5 "DA1-related protein 5" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR002182 Pfam:PF00931 PROSITE:PS00142
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 Pfam:PF05659
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0043531 Gene3D:2.10.110.10 InterPro:IPR008808 PROSITE:PS51153
EMBL:AB018119 HOGENOM:HOG000239946 InterPro:IPR022087 Pfam:PF12315
EMBL:AB013389 EMBL:BT003163 EMBL:AK227655 IPI:IPI00547750
RefSeq:NP_201464.2 UniGene:At.28858 ProteinModelPortal:Q84WJ0
SMR:Q84WJ0 PRIDE:Q84WJ0 EnsemblPlants:AT5G66630.1 GeneID:836795
KEGG:ath:AT5G66630 TAIR:At5g66630 eggNOG:KOG1703 InParanoid:Q84WJ0
OMA:LASTMER Genevestigator:Q84WJ0 Uniprot:Q84WJ0
Length = 702
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 162/384 (42%), Positives = 220/384 (57%)
Query: 119 NPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFS 178
N P +P P S +CGGCN + + + +G +HP CF CRSC PI HE
Sbjct: 334 NEKLPEVNP----PLS--MCGGCNSAVKHEESVNILGVLWHPGCFCCRSCDKPIAIHELE 387
Query: 179 ---LSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTS 235
+ + +HKSC++ C VC + + Y HPFW ++YCP HE D T
Sbjct: 388 NHVSNSRGKFHKSCYERY----CYVCKE------KKMKTYNIHPFWEERYCPVHEADGTP 437
Query: 236 RCCSCERLESWNTRYYSLEDGRSLCLECMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQ 295
+CCSCERLE T+Y L DGR LCLEC +SA MD+ +CQPLY +RD++E +NMK++++
Sbjct: 438 KCCSCERLEPRGTKYGKLSDGRWLCLECGKSA-MDSDECQPLYFDMRDFFESLNMKIEKE 496
Query: 296 IPMLLVERQALNEAIVGEKNGYHHMPETRGLCLSEEQTVTSILRRPRIGGNR-LVGMRTQ 354
P++LV ++ LN+ EK H+ R C+SE++ +T + PR G N+ L+ M T+
Sbjct: 497 FPLILVRKELLNKK--EEKIDNHYEVLIRAYCMSEQKIMTYVSEEPRTGQNKQLIDMDTE 554
Query: 355 PQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYM 414
PQ + +C+VTAIL+LYGLPRLLTG ILAHE+MH WLRL G+ NLN +EEGICQVL ++
Sbjct: 555 PQGVVHECKVTAILILYGLPRLLTGYILAHEMMHAWLRLNGHMNLNNILEEGICQVLGHL 614
Query: 415 WLESEVLPDYRNMPXXXXXXXXXXXXXXXXXX-------EVEKKLGEFFMHQIAHDASPA 467
WLES+ + +KKL EF +QI D SP
Sbjct: 615 WLESQTYATADTTADAASASSSSSRTPPAASASKKGEWSDFDKKLVEFCKNQIETDESPV 674
Query: 468 YGEGFRIANAAVNKYGLRRTLEHI 491
YG GFR N V L+ TL+ I
Sbjct: 675 YGLGFRTVNEMVTNSSLQETLKEI 698
>DICTYBASE|DDB_G0291251 [details] [associations]
symbol:limD "LIM-type zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001152 InterPro:IPR001781
InterPro:IPR003124 Pfam:PF02205 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51082 SMART:SM00132 dictyBase:DDB_G0291251 GO:GO:0005737
GO:GO:0007010 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 eggNOG:NOG279196
Gene3D:1.20.5.520 RefSeq:XP_635105.1 ProteinModelPortal:Q54EY5
EnsemblProtists:DDB0201567 GeneID:8628052 KEGG:ddi:DDB_G0291251
InParanoid:Q54EY5 OMA:ELVCARC Uniprot:Q54EY5
Length = 700
Score = 156 (60.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 37/132 (28%), Positives = 60/132 (45%)
Query: 135 YKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELT 194
+K+C C I YG + M FH CF C +C ++EF P+ +C + +T
Sbjct: 576 HKICNVCEKPI-YGTVVSAMNNTFHSECFVCSNCHSSFPDNEFYQYESKPWCATCIQNIT 634
Query: 195 ---HPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYY 251
+ KC+ CHQ I + G+I+ KY H + C C+ + N YY
Sbjct: 635 KTKYEKCDQCHQEIDSKSDGVIKVL-----GSKY---HNNGKCFVCRGCQTVFP-NLNYY 685
Query: 252 SLEDGRSLCLEC 263
+E+ + +C +C
Sbjct: 686 EIEN-QPMCYDC 696
>UNIPROTKB|D4A6Z5 [details] [associations]
symbol:D4A6Z5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 IPI:IPI00948645
Ensembl:ENSRNOT00000067257 ArrayExpress:D4A6Z5 Uniprot:D4A6Z5
Length = 261
Score = 138 (53.6 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 150 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGS-PYCEKDYQGLFGVK 208
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 209 CEACHQFI 216
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 130 (50.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 41/139 (29%), Positives = 57/139 (41%)
Query: 131 YPRSYKV--CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKS 188
+PRS ++ C GCN I L + ++H C +C C + E FS G Y K
Sbjct: 19 FPRSPEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFS-RGDGVYCKE 77
Query: 189 CFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNT 248
F + KC C Q IP + R F Y H H C C+R +
Sbjct: 78 DFFKRFGTKCAACQQGIPPTQ---VVRRAQDF---VY-----HLHCFACIVCKRQLATGD 126
Query: 249 RYYSLEDGRSLCLECMESA 267
+Y +ED R +C E+A
Sbjct: 127 EFYLMEDSRLVCKADYETA 145
>MGI|MGI:102784 [details] [associations]
symbol:Tgfb1i1 "transforming growth factor beta 1 induced
transcript 1" species:10090 "Mus musculus" [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009408 "response to heat" evidence=ISO]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030511
"positive regulation of transforming growth factor beta receptor
signaling pathway" evidence=ISO] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=ISO] [GO:0030855 "epithelial cell
differentiation" evidence=IGI] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IGI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0070411 "I-SMAD binding" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102784 GO:GO:0005737 GO:GO:0045893 GO:GO:0016055
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0003713
GO:GO:0010718 GO:GO:0030511 GO:GO:0045599 GO:GO:0031012
GO:GO:0016363 GO:GO:0016331 GO:GO:0045165 GO:GO:0030512
GO:GO:0030855 GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
OMA:TAGEQKE OrthoDB:EOG48GW35 EMBL:L22482 EMBL:AF083064
EMBL:DQ143891 EMBL:DQ143892 EMBL:DQ143893 EMBL:DQ143894
EMBL:DQ143895 EMBL:DQ143896 EMBL:DQ143897 EMBL:DQ143898
EMBL:DQ143899 EMBL:DQ143900 EMBL:AK156423 EMBL:AK158409
EMBL:BC002049 EMBL:BC056362 IPI:IPI00123274 IPI:IPI00652166
IPI:IPI00653891 IPI:IPI00654035 IPI:IPI00828289 IPI:IPI00848883
IPI:IPI00849982 IPI:IPI00850187 IPI:IPI00850542 IPI:IPI00850722
PIR:A55071 RefSeq:NP_033391.1 UniGene:Mm.3248
ProteinModelPortal:Q62219 SMR:Q62219 IntAct:Q62219 STRING:Q62219
PhosphoSite:Q62219 PaxDb:Q62219 PRIDE:Q62219
Ensembl:ENSMUST00000070656 Ensembl:ENSMUST00000163609
Ensembl:ENSMUST00000164710 Ensembl:ENSMUST00000167965
Ensembl:ENSMUST00000169919 GeneID:21804 KEGG:mmu:21804
UCSC:uc009jyl.1 UCSC:uc009jym.1 UCSC:uc009jyn.1 UCSC:uc009jyo.1
UCSC:uc009jyp.1 InParanoid:Q62219 NextBio:301180 Bgee:Q62219
Genevestigator:Q62219 Uniprot:Q62219
Length = 461
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P E F
Sbjct: 273 PFCPECYFERFSPRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGR 331
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 332 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 367
>RGD|620173 [details] [associations]
symbol:Tgfb1i1 "transforming growth factor beta 1 induced
transcript 1" species:10116 "Rattus norvegicus" [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=ISO;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009408 "response to heat" evidence=IDA] [GO:0010718 "positive
regulation of epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA;ISO] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA;ISO] [GO:0030855
"epithelial cell differentiation" evidence=IEA;ISO] [GO:0031012
"extracellular matrix" evidence=IEA;ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048495 "Roundabout binding" evidence=IEA;ISO] [GO:0050681
"androgen receptor binding" evidence=IEA;ISO] [GO:0070411 "I-SMAD
binding" evidence=ISO;IPI] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:620173
GO:GO:0005737 GO:GO:0030154 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0009408
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0016363
HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
EMBL:CV078574 EMBL:AF314960 IPI:IPI00366051 RefSeq:NP_001178769.1
UniGene:Rn.103260 ProteinModelPortal:Q99PD6 STRING:Q99PD6
PhosphoSite:Q99PD6 Ensembl:ENSRNOT00000054980 GeneID:84574
KEGG:rno:84574 UCSC:RGD:620173 NextBio:617115 ArrayExpress:Q99PD6
Genevestigator:Q99PD6 Uniprot:Q99PD6
Length = 461
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P E F
Sbjct: 273 PFCPECYFERFSPRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGR 331
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 332 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 367
>UNIPROTKB|Q99PD6 [details] [associations]
symbol:Tgfb1i1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:10116 "Rattus norvegicus" [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:620173
GO:GO:0005737 GO:GO:0030154 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0009408
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0016363
HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
EMBL:CV078574 EMBL:AF314960 IPI:IPI00366051 RefSeq:NP_001178769.1
UniGene:Rn.103260 ProteinModelPortal:Q99PD6 STRING:Q99PD6
PhosphoSite:Q99PD6 Ensembl:ENSRNOT00000054980 GeneID:84574
KEGG:rno:84574 UCSC:RGD:620173 NextBio:617115 ArrayExpress:Q99PD6
Genevestigator:Q99PD6 Uniprot:Q99PD6
Length = 461
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P E F
Sbjct: 273 PFCPECYFERFSPRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGR 331
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 332 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 367
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 41/144 (28%), Positives = 58/144 (40%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P P C GCN I L + ++H +C +C C + + FS +G
Sbjct: 24 PFSP---LPAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGS- 79
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERL 243
Y K F + KC C Q IP + + F Y H H C C R
Sbjct: 80 VYCKEDFFKRFGTKCTACQQGIPPTQ---VVRKAQDF---VY-----HLHCFACIICNRQ 128
Query: 244 ESWNTRYYSLEDGRSLCLECMESA 267
+ +Y +EDGR +C E E+A
Sbjct: 129 LATGDEFYLMEDGRLVCKEDYETA 152
>UNIPROTKB|F1LWK7 [details] [associations]
symbol:F1LWK7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 IPI:IPI00388829
PRIDE:F1LWK7 Ensembl:ENSRNOT00000018693 ArrayExpress:F1LWK7
Uniprot:F1LWK7
Length = 655
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 149 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGS-PYCEKDYQGLFGVK 207
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 208 CEACHQFI 215
>UNIPROTKB|F1LX72 [details] [associations]
symbol:F1LX72 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 IPI:IPI00198339 PRIDE:F1LX72
Ensembl:ENSRNOT00000018611 ArrayExpress:F1LX72 Uniprot:F1LX72
Length = 701
Score = 138 (53.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 149 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGS-PYCEKDYQGLFGVK 207
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 208 CEACHQFI 215
>UNIPROTKB|O43294 [details] [associations]
symbol:TGFB1I1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:9606 "Homo sapiens" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0009408 "response to heat" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030855
"epithelial cell differentiation" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=NAS;IPI] [GO:0003713 "transcription
coactivator activity" evidence=NAS;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS;IDA] [GO:0030521 "androgen receptor
signaling pathway" evidence=NAS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008285
"negative regulation of cell proliferation" evidence=TAS]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IDA] [GO:0010718 "positive
regulation of epithelial to mesenchymal transition" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0070411
"I-SMAD binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0045893 GO:GO:0008285 GO:GO:0030521 GO:GO:0016055
GO:GO:0005856 EMBL:CH471192 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 GO:GO:0005622 Gene3D:2.10.110.10
GO:GO:0003713 GO:GO:0006366 GO:GO:0010718 GO:GO:0030511
GO:GO:0045599 GO:GO:0016363 Pathway_Interaction_DB:ar_pathway
GO:GO:0016331 GO:GO:0050681 GO:GO:0045165 GO:GO:0030512
GO:GO:0030855 GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 InterPro:IPR017305
PIRSF:PIRSF037881 CTD:7041 OMA:TAGEQKE OrthoDB:EOG48GW35
EMBL:AF116343 EMBL:DQ309025 EMBL:AK313327 EMBL:BC001507
EMBL:BC001830 EMBL:BC017288 EMBL:BC032545 EMBL:AB007836
IPI:IPI00396399 IPI:IPI00761017 RefSeq:NP_001035919.1
RefSeq:NP_001158191.1 RefSeq:NP_057011.2 UniGene:Hs.513530
ProteinModelPortal:O43294 SMR:O43294 DIP:DIP-5931N IntAct:O43294
MINT:MINT-243624 STRING:O43294 PhosphoSite:O43294 PaxDb:O43294
PRIDE:O43294 DNASU:7041 Ensembl:ENST00000361773
Ensembl:ENST00000394858 Ensembl:ENST00000394863
Ensembl:ENST00000567607 GeneID:7041 KEGG:hsa:7041 UCSC:uc002ecd.2
GeneCards:GC16P031483 HGNC:HGNC:11767 HPA:CAB020844 HPA:HPA006376
MIM:602353 neXtProt:NX_O43294 PharmGKB:PA36481 InParanoid:O43294
GenomeRNAi:7041 NextBio:27511 Bgee:O43294 CleanEx:HS_TGFB1I1
Genevestigator:O43294 Uniprot:O43294
Length = 461
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 31/96 (32%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P + F
Sbjct: 273 PFCPECYFERFSPRCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGR 331
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 332 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 367
>UNIPROTKB|F1LWZ5 [details] [associations]
symbol:F1LWZ5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
IPI:IPI00358533 Ensembl:ENSRNOT00000018647 ArrayExpress:F1LWZ5
Uniprot:F1LWZ5
Length = 781
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 145 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGS-PYCEKDYQGLFGVK 203
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 204 CEACHQFI 211
>UNIPROTKB|H0Y3K7 [details] [associations]
symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873
EMBL:AL590109 HGNC:HGNC:78 ChiTaRS:ABLIM1 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 ProteinModelPortal:H0Y3K7
PRIDE:H0Y3K7 Ensembl:ENST00000392955 Bgee:H0Y3K7 Uniprot:H0Y3K7
Length = 652
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 135 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 193
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 194 CEACHQFI 201
>UNIPROTKB|Q5T6N2 [details] [associations]
symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873
EMBL:AL590109 UniGene:Hs.438236 UniGene:Hs.538331 HGNC:HGNC:78
HOVERGEN:HBG031499 ChiTaRS:ABLIM1 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997
IPI:IPI00455786 SMR:Q5T6N2 Ensembl:ENST00000369256 Uniprot:Q5T6N2
Length = 702
Score = 137 (53.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 150 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 208
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 209 CEACHQFI 216
>MGI|MGI:1194500 [details] [associations]
symbol:Ablim1 "actin-binding LIM protein 1" species:10090
"Mus musculus" [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 MGI:MGI:1194500
GO:GO:0005737 GO:GO:0007411 GO:GO:0003779 GO:GO:0007010
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944 CTD:3983
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 EMBL:AF404774 EMBL:AF404775
EMBL:AF404776 EMBL:AK122196 EMBL:AK029371 IPI:IPI00356147
IPI:IPI00403221 IPI:IPI00463138 IPI:IPI00467530 IPI:IPI01007625
RefSeq:NP_001096647.1 RefSeq:NP_001096648.1 RefSeq:NP_848803.3
UniGene:Mm.217161 UniGene:Mm.446592 ProteinModelPortal:Q8K4G5
SMR:Q8K4G5 IntAct:Q8K4G5 STRING:Q8K4G5 PhosphoSite:Q8K4G5
PaxDb:Q8K4G5 PRIDE:Q8K4G5 Ensembl:ENSMUST00000099294
Ensembl:ENSMUST00000111524 Ensembl:ENSMUST00000111546 GeneID:226251
KEGG:mmu:226251 UCSC:uc008hzr.2 UCSC:uc008hzs.2 UCSC:uc008hzt.2
UCSC:uc008hzz.1 UCSC:uc009vbz.1 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 InParanoid:Q8K4G5 NextBio:378072 Bgee:Q8K4G5
CleanEx:MM_ABLIM1 Genevestigator:Q8K4G5
GermOnline:ENSMUSG00000025085 Uniprot:Q8K4G5
Length = 861
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 226 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGS-PYCEKDYQGLFGVK 284
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 285 CEACHQFI 292
>UNIPROTKB|F8W8M4 [details] [associations]
symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873
EMBL:AL590109 HGNC:HGNC:78 ChiTaRS:ABLIM1 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 IPI:IPI00940368
ProteinModelPortal:F8W8M4 SMR:F8W8M4 PRIDE:F8W8M4
Ensembl:ENST00000533213 ArrayExpress:F8W8M4 Bgee:F8W8M4
Uniprot:F8W8M4
Length = 718
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 166 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 224
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 225 CEACHQFI 232
>UNIPROTKB|Q3MHZ4 [details] [associations]
symbol:TGFB1I1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:9913 "Bos taurus" [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0070411
"I-SMAD binding" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0030855 "epithelial cell differentiation"
evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=IEA] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005737 GO:GO:0045893 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0003713 GO:GO:0010718
GO:GO:0030511 GO:GO:0045599 GO:GO:0031012 GO:GO:0016363
GO:GO:0016331 GO:GO:0045165 GO:GO:0030512 GO:GO:0030855
GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881
EMBL:DV813479 EMBL:BC104510 IPI:IPI00686932 RefSeq:NP_001030390.1
UniGene:Bt.51950 ProteinModelPortal:Q3MHZ4 SMR:Q3MHZ4 STRING:Q3MHZ4
PRIDE:Q3MHZ4 Ensembl:ENSBTAT00000003094 GeneID:515834
KEGG:bta:515834 CTD:7041 InParanoid:Q3MHZ4 OMA:TAGEQKE
OrthoDB:EOG48GW35 NextBio:20872019 Uniprot:Q3MHZ4
Length = 456
Score = 134 (52.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 31/96 (32%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P + F
Sbjct: 268 PFCPECYFERFSPRCGLCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGR 326
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 327 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 362
>UNIPROTKB|E2RTE0 [details] [associations]
symbol:TGFB1I1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070411 "I-SMAD binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0005622
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0003713
GO:GO:0010718 GO:GO:0030511 GO:GO:0045599 GO:GO:0031012
GO:GO:0016331 GO:GO:0045165 GO:GO:0030512 GO:GO:0030855
GO:GO:0030579 InterPro:IPR017305 PIRSF:PIRSF037881 OMA:TAGEQKE
EMBL:AAEX03004374 Ensembl:ENSCAFT00000026755 Uniprot:E2RTE0
Length = 461
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/96 (32%), Positives = 44/96 (45%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P+ P Y+ R CG CN I + + +GT++HP F C SCG P + F
Sbjct: 273 PFCPECYFERFSPRCGLCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGR 331
Query: 184 PYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
PY + F +L P+C+ C I N + HP
Sbjct: 332 PYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHP 367
>UNIPROTKB|O14639 [details] [associations]
symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0007601 "visual perception"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0003779 GO:GO:0007010
GO:GO:0046872 GO:GO:0015629 GO:GO:0007601 GO:GO:0008270
GO:GO:0045944 EMBL:AF005654 EMBL:D31883 EMBL:AK098277 EMBL:CR749819
EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 EMBL:BC002448
IPI:IPI00329495 IPI:IPI00456617 IPI:IPI00551038 IPI:IPI00744789
IPI:IPI00883638 RefSeq:NP_001003407.1 RefSeq:NP_001003408.1
RefSeq:NP_002304.3 RefSeq:NP_006711.3 UniGene:Hs.438236
UniGene:Hs.538331 ProteinModelPortal:O14639 SMR:O14639
IntAct:O14639 MINT:MINT-1447354 STRING:O14639 PhosphoSite:O14639
PaxDb:O14639 PRIDE:O14639 Ensembl:ENST00000336585
Ensembl:ENST00000369252 Ensembl:ENST00000369257
Ensembl:ENST00000392952 GeneID:3983 KEGG:hsa:3983 UCSC:uc021pyu.1
UCSC:uc021pyw.1 UCSC:uc021pyz.1 UCSC:uc021pzc.1 CTD:3983
GeneCards:GC10M116190 HGNC:HGNC:78 HPA:HPA038951 HPA:HPA038952
MIM:602330 neXtProt:NX_O14639 PharmGKB:PA35023 eggNOG:NOG302299
HOVERGEN:HBG031499 KO:K07520 OrthoDB:EOG44TP7D ChiTaRS:ABLIM1
GenomeRNAi:3983 NextBio:15616 ArrayExpress:O14639 Bgee:O14639
CleanEx:HS_ABLIM1 Genevestigator:O14639 GermOnline:ENSG00000099204
GO:GO:0009887 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
Uniprot:O14639
Length = 778
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 226 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 284
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 285 CEACHQFI 292
>UNIPROTKB|J9P5B6 [details] [associations]
symbol:ABLIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 EMBL:AAEX03015541
EMBL:AAEX03015542 Ensembl:ENSCAFT00000045219 Uniprot:J9P5B6
Length = 667
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 150 CAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 208
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 209 CEACHQFI 216
>MGI|MGI:1341092 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10090
"Mus musculus" [GO:0001725 "stress fiber" evidence=IDA] [GO:0003779
"actin binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:1341092 GO:GO:0005634 GO:GO:0003779
GO:GO:0030018 GO:GO:0046872 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 CTD:2275 OMA:QFTSRDD EMBL:AF134772
EMBL:AF114382 EMBL:AL606907 EMBL:BC144903 EMBL:BC145939
EMBL:AF149826 IPI:IPI00345772 IPI:IPI00828338 RefSeq:NP_034343.2
UniGene:Mm.331856 ProteinModelPortal:Q9R059 MINT:MINT-4788495
STRING:Q9R059 PhosphoSite:Q9R059 PaxDb:Q9R059 PRIDE:Q9R059
Ensembl:ENSMUST00000038684 GeneID:14201 KEGG:mmu:14201
InParanoid:Q9R059 NextBio:285438 CleanEx:MM_FHL3
Genevestigator:Q9R059 GermOnline:ENSMUSG00000032643 Uniprot:Q9R059
Length = 289
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/153 (29%), Positives = 63/153 (41%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 140 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCKTPLAGQ 198
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHE-HDHT 234
+F+ DPY +CF EL PKC C + I T G+G E KY + H H
Sbjct: 199 QFTSRDDDPYCVACFGELFAPKCSSCKRPI-TGGSGGGEGA--GLGGGKYVSFEDRHWHH 255
Query: 235 SRCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
S C SC R + + DG + LC C ++
Sbjct: 256 S-CFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 287
>UNIPROTKB|Q5T6N4 [details] [associations]
symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873
EMBL:AL590109 UniGene:Hs.438236 UniGene:Hs.538331 HGNC:HGNC:78
HOVERGEN:HBG031499 ChiTaRS:ABLIM1 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997
IPI:IPI00515115 SMR:Q5T6N4 Ensembl:ENST00000277895 OMA:HHPSEKP
Uniprot:Q5T6N4
Length = 846
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 226 CAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 284
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 285 CEACHQFI 292
>UNIPROTKB|F1PWQ6 [details] [associations]
symbol:ABLIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 OMA:HHPSEKP
EMBL:AAEX03015541 EMBL:AAEX03015542 Ensembl:ENSCAFT00000018339
Uniprot:F1PWQ6
Length = 778
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 226 CAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 284
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 285 CEACHQFI 292
>UNIPROTKB|F1MI97 [details] [associations]
symbol:F1MI97 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 OMA:HHPSEKP EMBL:DAAA02059267
EMBL:DAAA02059268 EMBL:DAAA02059269 IPI:IPI00701621
Ensembl:ENSBTAT00000006447 Uniprot:F1MI97
Length = 790
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 150 CAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 208
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 209 CEACHQFI 216
>UNIPROTKB|F1S4V5 [details] [associations]
symbol:ABLIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 OMA:HHPSEKP EMBL:CT737312
EMBL:CT737314 EMBL:CU407061 Ensembl:ENSSSCT00000011650
Uniprot:F1S4V5
Length = 798
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C+SCG +T S G PY + ++ L K
Sbjct: 156 CAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGA-PYCEKDYQGLFGVK 214
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 215 CEACHQFI 222
>RGD|1307180 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10116
"Rattus norvegicus" [GO:0001725 "stress fiber" evidence=IEA;ISO]
[GO:0003779 "actin binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA;ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307180 GO:GO:0005634 GO:GO:0030018 GO:GO:0046872 GO:GO:0030036
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0001725 EMBL:CH473968
GeneTree:ENSGT00690000101670 CTD:2275 OMA:QFTSRDD OrthoDB:EOG46144B
IPI:IPI00191454 RefSeq:NP_001101449.1 UniGene:Rn.229136
Ensembl:ENSRNOT00000010007 GeneID:313582 KEGG:rno:313582
UCSC:RGD:1307180 NextBio:666470 Uniprot:D3ZPF0
Length = 288
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/153 (28%), Positives = 62/153 (40%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 140 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQ 198
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHE-HDHT 234
+F+ DPY +CF EL PKC C + I T G+G KY + H H
Sbjct: 199 QFTSRDDDPYCVACFGELFAPKCSSCKRPI-TGGSGS---EGAGLGGGKYVSFEDRHWHH 254
Query: 235 SRCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
S C SC R + + DG + LC C ++
Sbjct: 255 S-CFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 286
>UNIPROTKB|E1BS96 [details] [associations]
symbol:E1BS96 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 OMA:HHPSEKP EMBL:AADN02030925
EMBL:AADN02030926 EMBL:AADN02030927 EMBL:AADN02030928
EMBL:AADN02030929 EMBL:AADN02030930 EMBL:AADN02030931
EMBL:AADN02030932 IPI:IPI00582348 Ensembl:ENSGALT00000014731
Uniprot:E1BS96
Length = 712
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + +H CF+C++CG +T S G PY + ++ L K
Sbjct: 160 CAGCGRDIKNGQALLALDKQWHLGCFKCKACGKVLTGEYISKDGA-PYCEKDYQVLFGVK 218
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 219 CEACHQFI 226
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/130 (29%), Positives = 54/130 (41%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GCN I L + ++H +C +C C + + FS +G Y K F + K
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTK 88
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F Y H H C C R + +Y +EDGR
Sbjct: 89 CTACQQGIPPTQ---VVRKAQDF---VY-----HLHCFACIICNRQLATGDEFYLMEDGR 137
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 138 LVCKEDYETA 147
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/130 (29%), Positives = 54/130 (41%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GCN I L + ++H +C +C C + + FS +G Y K F + K
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTK 88
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F Y H H C C R + +Y +EDGR
Sbjct: 89 CTACQQGIPPTQ---VVRKAQDF---VY-----HLHCFACIICNRQLATGDEFYLMEDGR 137
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 138 LVCKEDYETA 147
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/130 (29%), Positives = 54/130 (41%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GCN I L + ++H +C +C C + + FS +G Y K F + K
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTK 88
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F Y H H C C R + +Y +EDGR
Sbjct: 89 CTACQQGIPPTQ---VVRKAQDF---VY-----HLHCFACIICNRQLATGDEFYLMEDGR 137
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 138 LVCKEDYETA 147
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/139 (29%), Positives = 57/139 (41%)
Query: 131 YPRSYKV--CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKS 188
+PRS ++ C GCN I L + ++H C +C C + E FS G Y K
Sbjct: 19 FPRSPEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFS-RGDGVYCKE 77
Query: 189 CFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNT 248
F + KC C Q IP + R F Y H H C C+R +
Sbjct: 78 DFFKRFGTKCAACQQGIPPTQ---VVRRAQDF---VY-----HLHCFACIVCKRQLATGD 126
Query: 249 RYYSLEDGRSLCLECMESA 267
+Y +ED R +C E+A
Sbjct: 127 EFYLMEDSRLVCKADYETA 145
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 37/130 (28%), Positives = 54/130 (41%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC+ I L + ++H +C +C C + E F+ +G Y K F + K
Sbjct: 5 CAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGS-VYCKEDFFKRFGTK 63
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F Y H H C C R + +Y +EDGR
Sbjct: 64 CTACQQGIPPTQ---VVRKAQDF---VY-----HLHCFACIICSRQLATGDEFYLMEDGR 112
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 113 LVCKEDYETA 122
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 39/131 (29%), Positives = 52/131 (39%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
VC GCN I L + ++H C +C C + + FS G Y K F +
Sbjct: 27 VCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFS-RGDSVYCKDDFFKRFGT 85
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDG 256
KC C Q IP + R F Y H H C C+R + YY +ED
Sbjct: 86 KCAACQQGIPPTQ---VVRRAQDF---VY-----HLHCFACIVCKRQLATGDEYYLMEDS 134
Query: 257 RSLCLECMESA 267
R +C E+A
Sbjct: 135 RLVCKADYETA 145
>UNIPROTKB|E7EMK8 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC004263
HGNC:HGNC:9718 ChiTaRS:PXN IPI:IPI00941515
ProteinModelPortal:E7EMK8 SMR:E7EMK8 PRIDE:E7EMK8
Ensembl:ENST00000397506 UCSC:uc001txu.3 ArrayExpress:E7EMK8
Bgee:E7EMK8 Uniprot:E7EMK8
Length = 403
Score = 127 (49.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 275 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 333
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 334 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 378
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 379 QLNKGTFKEQNDKPYCQNC 397
>UNIPROTKB|F1MFD1 [details] [associations]
symbol:PXN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060396 "growth hormone receptor signaling pathway"
evidence=IEA] [GO:0051435 "BH4 domain binding" evidence=IEA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IEA] [GO:0048041 "focal adhesion assembly" evidence=IEA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0007010 GO:GO:0005856 GO:GO:0046872 GO:GO:0018108
GO:GO:0008270 GO:GO:0000187 GO:GO:0006928 GO:GO:0005925
GO:GO:0030027 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0048041 GO:GO:0007229 GO:GO:0034614 GO:GO:0030032
GO:GO:0048754 GO:GO:0060396 EMBL:DAAA02045446 IPI:IPI00694169
Ensembl:ENSBTAT00000024101 OMA:GFMAQGK Uniprot:F1MFD1
Length = 586
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/139 (27%), Positives = 53/139 (38%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 458 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQP 516
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y ++ + E C C + P G RC A+K+ P H C C L+
Sbjct: 517 YCEAHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 561
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 562 QLNKGTFKEQNDKPYCQNC 580
>UNIPROTKB|F1MZP2 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] [GO:0033628 "regulation of cell
adhesion mediated by integrin" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0002102 "podosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 InterPro:IPR017305 PIRSF:PIRSF037881
EMBL:DAAA02041802 EMBL:DAAA02041803 IPI:IPI00691421
UniGene:Bt.64569 Ensembl:ENSBTAT00000050762 ArrayExpress:F1MZP2
Uniprot:F1MZP2
Length = 386
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSC--GYPITEHEFSLSGKDPYHKSCFKELTH 195
CGGCN + NYL MGT +HP CF C C G+ T F L G+ P+ + + +
Sbjct: 270 CGGCNRPV-LENYLSAMGTVWHPECFVCGECFSGFS-TGSFFELDGR-PFCELHYHQRRG 326
Query: 196 PKCEVCHQYIPTNGAGLIEYRCHP 219
C C Q I + Y+ HP
Sbjct: 327 TLCHGCGQPITGRCISAMGYKFHP 350
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 133 RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKE 192
R +C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 31 REIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFS-RGESVYCKDDFFK 89
Query: 193 LTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYS 252
KC C IP + R F Y H H C C+R + +Y
Sbjct: 90 RFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYL 138
Query: 253 LEDGRSLCLECMESA 267
+ED R +C E+A
Sbjct: 139 MEDSRLVCKADYETA 153
>UNIPROTKB|E2QZZ9 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 EMBL:AAEX03006760 EMBL:AAEX03006761
Ensembl:ENSCAFT00000031319 Uniprot:E2QZZ9
Length = 397
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 133 RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKE 192
R +C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 31 REIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFS-RGESVYCKDDFFK 89
Query: 193 LTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYS 252
KC C IP + R F Y H H C C+R + +Y
Sbjct: 90 RFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYL 138
Query: 253 LEDGRSLCLECMESA 267
+ED R +C E+A
Sbjct: 139 MEDSRLVCKADYETA 153
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 133 RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKE 192
R +C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 26 REIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFS-RGESVYCKDDFFK 84
Query: 193 LTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYS 252
KC C IP + R F Y H H C C+R + +Y
Sbjct: 85 RFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYL 133
Query: 253 LEDGRSLCLECMESA 267
+ED R +C E+A
Sbjct: 134 MEDSRLVCKADYETA 148
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 133 RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKE 192
R +C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 31 REIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFS-RGESVYCKDDFFK 89
Query: 193 LTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYS 252
KC C IP + R F Y H H C C+R + +Y
Sbjct: 90 RFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYL 138
Query: 253 LEDGRSLCLECMESA 267
+ED R +C E+A
Sbjct: 139 MEDSRLVCKADYETA 153
>UNIPROTKB|L7N0D8 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 Ensembl:ENSCAFT00000020228 Uniprot:L7N0D8
Length = 403
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 133 RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKE 192
R +C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 31 REIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFS-RGESVYCKDDFFK 89
Query: 193 LTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYS 252
KC C IP + R F Y H H C C+R + +Y
Sbjct: 90 RFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYL 138
Query: 253 LEDGRSLCLECMESA 267
+ED R +C E+A
Sbjct: 139 MEDSRLVCKADYETA 153
>ZFIN|ZDB-GENE-030131-874 [details] [associations]
symbol:si:dkey-23o10.3 "si:dkey-23o10.3"
species:7955 "Danio rerio" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153
ZFIN:ZDB-GENE-030131-874 HOVERGEN:HBG031499 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 NextBio:20888389 EMBL:CR457461 IPI:IPI00919355
Ensembl:ENSDART00000060067 Uniprot:F6PFJ2
Length = 682
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P +P + SY C GC +I G L + +H +CFRC++CG +T S G
Sbjct: 139 PNEPIKIHGPSY--CAGCKEEIKQGQSLLALEKQWHVSCFRCQTCGLVLTGEYISKDGV- 195
Query: 184 PYHKSCFKELTHPKCEVCHQYI 205
PY +S + KCE C +YI
Sbjct: 196 PYCESDYHAQFGIKCETCDRYI 217
>ZFIN|ZDB-GENE-070112-1122 [details] [associations]
symbol:ablim3 "actin binding LIM protein family,
member 3" species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153
ZFIN:ZDB-GENE-070112-1122 eggNOG:NOG302299 HOVERGEN:HBG031499
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 HOGENOM:HOG000285997 OrthoDB:EOG4PNXGH
EMBL:CU151895 IPI:IPI00919704 UniGene:Dr.111054
Ensembl:ENSDART00000052595 NextBio:20888389 Uniprot:F6P113
Length = 683
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
P +P + SY C GC +I G L + +H +CFRC++CG +T S G
Sbjct: 140 PNEPIKIHGPSY--CAGCKEEIKQGQSLLALEKQWHVSCFRCQTCGLVLTGEYISKDGV- 196
Query: 184 PYHKSCFKELTHPKCEVCHQYI 205
PY +S + KCE C +YI
Sbjct: 197 PYCESDYHAQFGIKCETCDRYI 218
>RGD|1305759 [details] [associations]
symbol:Pxn "paxillin" species:10116 "Rattus norvegicus"
[GO:0000187 "activation of MAPK activity" evidence=IEA;ISO]
[GO:0005178 "integrin binding" evidence=IPI] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0005925 "focal adhesion" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA;ISO] [GO:0007010 "cytoskeleton
organization" evidence=IEA;ISO] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA;ISO] [GO:0008013 "beta-catenin binding"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017166 "vinculin binding" evidence=IEA;ISO] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030027 "lamellipodium"
evidence=IEA;ISO] [GO:0030032 "lamellipodium assembly"
evidence=IEA;ISO] [GO:0031252 "cell leading edge" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0034614
"cellular response to reactive oxygen species" evidence=IEA;ISO]
[GO:0048041 "focal adhesion assembly" evidence=IEA;ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA;ISO]
[GO:0051435 "BH4 domain binding" evidence=IEA;ISO] [GO:0060396
"growth hormone receptor signaling pathway" evidence=IEA;ISO]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305759
GO:GO:0005938 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007160 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 KO:K05760 CTD:5829 EMBL:BC081984 IPI:IPI00471807
RefSeq:NP_001012147.1 UniGene:Rn.75 ProteinModelPortal:Q66H76
SMR:Q66H76 DIP:DIP-48423N STRING:Q66H76 PhosphoSite:Q66H76
PRIDE:Q66H76 Ensembl:ENSRNOT00000047466 GeneID:360820
KEGG:rno:360820 ChEMBL:CHEMBL5613 NextBio:674221
ArrayExpress:Q66H76 Genevestigator:Q66H76
GermOnline:ENSRNOG00000001149 Uniprot:Q66H76
Length = 586
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 458 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 516
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 517 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 561
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 562 QLNKGTFKEQNDKPYCQSC 580
>UNIPROTKB|Q66H76 [details] [associations]
symbol:Pxn "Paxillin" species:10116 "Rattus norvegicus"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305759
GO:GO:0005938 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007160 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 KO:K05760 CTD:5829 EMBL:BC081984 IPI:IPI00471807
RefSeq:NP_001012147.1 UniGene:Rn.75 ProteinModelPortal:Q66H76
SMR:Q66H76 DIP:DIP-48423N STRING:Q66H76 PhosphoSite:Q66H76
PRIDE:Q66H76 Ensembl:ENSRNOT00000047466 GeneID:360820
KEGG:rno:360820 ChEMBL:CHEMBL5613 NextBio:674221
ArrayExpress:Q66H76 Genevestigator:Q66H76
GermOnline:ENSRNOG00000001149 Uniprot:Q66H76
Length = 586
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 458 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 516
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 517 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 561
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 562 QLNKGTFKEQNDKPYCQSC 580
>UNIPROTKB|F5GZ78 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0007160 EMBL:AC004263 HGNC:HGNC:9718 ChiTaRS:PXN
IPI:IPI01015055 ProteinModelPortal:F5GZ78 SMR:F5GZ78 PRIDE:F5GZ78
Ensembl:ENST00000536957 PhylomeDB:F5GZ78 ArrayExpress:F5GZ78
Bgee:F5GZ78 Uniprot:F5GZ78
Length = 589
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 461 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 519
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 520 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 564
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 565 QLNKGTFKEQNDKPYCQNC 583
>UNIPROTKB|F1PUT6 [details] [associations]
symbol:PXN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060396 "growth hormone receptor signaling
pathway" evidence=IEA] [GO:0051435 "BH4 domain binding"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IEA] [GO:0048041 "focal adhesion assembly"
evidence=IEA] [GO:0034614 "cellular response to reactive oxygen
species" evidence=IEA] [GO:0030032 "lamellipodium assembly"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0007010 GO:GO:0005856 GO:GO:0046872 GO:GO:0018108
GO:GO:0008270 GO:GO:0000187 GO:GO:0006928 GO:GO:0005925
GO:GO:0030027 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0048041 GO:GO:0007229 GO:GO:0034614 GO:GO:0030032
GO:GO:0048754 GO:GO:0060396 EMBL:AAEX03014732 OMA:GFMAQGK
Ensembl:ENSCAFT00000016266 Uniprot:F1PUT6
Length = 590
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 462 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 520
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 521 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 565
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 566 QLNKGTFKEQNDKPYCQNC 584
>UNIPROTKB|P49023 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000187
"activation of MAPK activity" evidence=IEA] [GO:0005178 "integrin
binding" evidence=IEA] [GO:0006928 "cellular component movement"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0048041 "focal adhesion
assembly" evidence=IEA] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=IEA] [GO:0051435 "BH4 domain binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005875
"microtubule associated complex" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007172 "signal complex assembly"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0006936 "muscle contraction" evidence=TAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0034329 "cell junction assembly" evidence=TAS] [GO:0005925
"focal adhesion" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0034614 "cellular response to reactive oxygen
species" evidence=IEP] [GO:0060396 "growth hormone receptor
signaling pathway" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR001904 PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005886 GO:GO:0005938 Reactome:REACT_111102
Reactome:REACT_116125 GO:GO:0007173 GO:GO:0005875
Pathway_Interaction_DB:igf1_pathway GO:GO:0007010 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0007155 GO:GO:0000187
GO:GO:0006928 GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
Pathway_Interaction_DB:arf6cyclingpathway GO:GO:0006936
Reactome:REACT_17044 Reactome:REACT_111155 GO:GO:0034329
GO:GO:0048041 GO:GO:0007229
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0034614
Pathway_Interaction_DB:angiopoietinreceptor_pathway GO:GO:0030032
Pathway_Interaction_DB:fcer1pathway
Pathway_Interaction_DB:avb3_integrin_pathway
Pathway_Interaction_DB:met_pathway
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:a4b1_paxdep_pathway
Pathway_Interaction_DB:a4b1_paxindep_pathway GO:GO:0048754
Pathway_Interaction_DB:ret_pathway GO:GO:0007172
Pathway_Interaction_DB:ephbfwdpathway PDB:1OW6 PDB:1OW7 PDB:1OW8
PDBsum:1OW6 PDBsum:1OW7 PDBsum:1OW8 GO:GO:0060396 PDB:1KKY PDB:1KL0
PDBsum:1KKY PDBsum:1KL0 PDB:3GM1 PDB:3U3C PDB:3U3F PDBsum:3GM1
PDBsum:3U3C PDBsum:3U3F eggNOG:NOG267887 HOVERGEN:HBG001512
PDB:3PY7 PDBsum:3PY7 EMBL:AC004263 PDB:2K2R PDB:2VZD PDB:2VZG
PDB:2VZI PDBsum:2K2R PDBsum:2VZD PDBsum:2VZG PDBsum:2VZI PDB:4EDN
PDBsum:4EDN KO:K05760 CTD:5829 EMBL:U14588 EMBL:U87946 EMBL:U87941
EMBL:U87942 EMBL:U87943 EMBL:U87944 EMBL:U87945 EMBL:D86862
EMBL:D86863 EMBL:AK314204 EMBL:BX648777 EMBL:BC136787 EMBL:BC136794
EMBL:BC144410 IPI:IPI00220030 IPI:IPI00220031 IPI:IPI00335634
IPI:IPI00890738 PIR:A55933 RefSeq:NP_001074324.1
RefSeq:NP_001230685.1 RefSeq:NP_002850.2 RefSeq:NP_079433.3
UniGene:Hs.446336 PDB:2O9V PDB:3RQE PDB:3RQF PDB:3RQG PDBsum:2O9V
PDBsum:3RQE PDBsum:3RQF PDBsum:3RQG ProteinModelPortal:P49023
SMR:P49023 DIP:DIP-33851N IntAct:P49023 MINT:MINT-92615
STRING:P49023 PhosphoSite:P49023 DMDM:27735219 PaxDb:P49023
PRIDE:P49023 Ensembl:ENST00000228307 Ensembl:ENST00000267257
Ensembl:ENST00000424649 Ensembl:ENST00000458477 GeneID:5829
KEGG:hsa:5829 UCSC:uc001txt.3 UCSC:uc001txv.3 UCSC:uc001txx.3
UCSC:uc001txy.3 GeneCards:GC12M120648 HGNC:HGNC:9718 HPA:CAB003841
MIM:602505 neXtProt:NX_P49023 PharmGKB:PA34062 ChEMBL:CHEMBL5715
ChiTaRS:PXN EvolutionaryTrace:P49023 GenomeRNAi:5829 NextBio:22710
PMAP-CutDB:P49023 ArrayExpress:P49023 Bgee:P49023 CleanEx:HS_PXN
Genevestigator:P49023 GermOnline:ENSG00000089159 Uniprot:P49023
Length = 591
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 463 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 521
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 522 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 566
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 567 QLNKGTFKEQNDKPYCQNC 585
>MGI|MGI:108295 [details] [associations]
symbol:Pxn "paxillin" species:10090 "Mus musculus"
[GO:0000187 "activation of MAPK activity" evidence=IDA] [GO:0005178
"integrin binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO;IDA;TAS]
[GO:0006928 "cellular component movement" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IMP;TAS] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017166 "vinculin
binding" evidence=ISO] [GO:0018108 "peptidyl-tyrosine
phosphorylation" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO;IDA]
[GO:0030032 "lamellipodium assembly" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030159 "receptor signaling
complex scaffold activity" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IDA] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IDA]
[GO:0051435 "BH4 domain binding" evidence=IPI] [GO:0060396 "growth
hormone receptor signaling pathway" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:108295
GO:GO:0005938 GO:GO:0007010 GO:GO:0005856 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0000187 GO:GO:0006928
GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0048041 GO:GO:0007229
GO:GO:0030032 GO:GO:0030159 GO:GO:0048754 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OrthoDB:EOG4TMR25 KO:K05760
CTD:5829 ChiTaRS:PXN EMBL:AF293883 EMBL:AF293882 EMBL:AK149933
EMBL:AK157688 EMBL:AK167299 EMBL:AK171436 IPI:IPI00128703
IPI:IPI00165881 RefSeq:NP_035353.1 RefSeq:NP_598676.2
UniGene:Mm.18714 ProteinModelPortal:Q8VI36 SMR:Q8VI36 IntAct:Q8VI36
MINT:MINT-141924 STRING:Q8VI36 PhosphoSite:Q8VI36 PaxDb:Q8VI36
PRIDE:Q8VI36 DNASU:19303 Ensembl:ENSMUST00000067268 GeneID:19303
KEGG:mmu:19303 UCSC:uc008zea.1 UCSC:uc008zeb.1 InParanoid:Q8VI36
NextBio:296261 PMAP-CutDB:Q8VI36 Bgee:Q8VI36 CleanEx:MM_PXN
Genevestigator:Q8VI36 GermOnline:ENSMUSG00000029528 Uniprot:Q8VI36
Length = 591
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 463 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 521
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 522 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 566
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 567 QLNKGTFKEQNDKPYCQSC 585
>UNIPROTKB|F1M1Z5 [details] [associations]
symbol:Pxn "Paxillin" species:10116 "Rattus norvegicus"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1305759 GO:GO:0005886 GO:GO:0007010 GO:GO:0005856 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0000187 GO:GO:0006928
GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10 GO:GO:0048041
GO:GO:0007229 GO:GO:0034614 GO:GO:0030032 GO:GO:0048754
GO:GO:0060396 IPI:IPI00363651 Ensembl:ENSRNOT00000001520
ArrayExpress:F1M1Z5 Uniprot:F1M1Z5
Length = 591
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/139 (27%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 463 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQP 521
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC A+K+ P H C C L+
Sbjct: 522 YCEVHYHERRGSLCSGCQK--PITG------RCITAMAKKFHPEH-----FVCAFC--LK 566
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 567 QLNKGTFKEQNDKPYCQSC 585
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 38/130 (29%), Positives = 51/130 (39%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GCN I L + ++H C +C C + E FS G Y K F + K
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFS-RGDSVYCKDDFFKRFGTK 86
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + R F Y H H C C+R + +Y +ED R
Sbjct: 87 CAACQQGIPPTQ---VVRRAQEF---VY-----HLHCFACIVCKRQLATGDEFYLMEDSR 135
Query: 258 SLCLECMESA 267
+C E+A
Sbjct: 136 LVCKADYETA 145
>UNIPROTKB|F1SV27 [details] [associations]
symbol:FHL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 OMA:QFTSRDD EMBL:CR956649
EMBL:FP102603 RefSeq:XP_003127846.1 Ensembl:ENSSSCT00000004040
Ensembl:ENSSSCT00000004043 GeneID:100512841 KEGG:ssc:100512841
Uniprot:F1SV27
Length = 280
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 43/153 (28%), Positives = 60/153 (39%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 140 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQ 198
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHE-HDHT 234
+F+ DPY +CF EL PKC C + P G G KY + H H
Sbjct: 199 QFTSRDDDPYCVACFGELFAPKCSSCKR--PITGLG----------GGKYVSFEDRHWHH 246
Query: 235 SRCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
S C SC R + + DG + LC C ++
Sbjct: 247 S-CFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 278
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
+C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 33 MCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFS-RGESVYCKDDFFKRFGT 91
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDG 256
KC C IP + R F Y H H C C+R + +Y +ED
Sbjct: 92 KCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYLMEDS 140
Query: 257 RSLCLECMESA 267
R +C E+A
Sbjct: 141 RLVCKADYETA 151
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
+C GC+ I L + ++H C +C C P+ E FS G+ Y K F +
Sbjct: 33 MCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFS-RGESVYCKDDFFKRFGT 91
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDG 256
KC C IP + R F Y H H C C+R + +Y +ED
Sbjct: 92 KCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLATGDEFYLMEDS 140
Query: 257 RSLCLECMESA 267
R +C E+A
Sbjct: 141 RLVCKADYETA 151
>DICTYBASE|DDB_G0274109 [details] [associations]
symbol:paxB "paxillin" species:44689 "Dictyostelium
discoideum" [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0031589 "cell-substrate
adhesion" evidence=IMP] [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0048870
"cell motility" evidence=IMP] [GO:0007109 "cytokinesis, completion
of separation" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IGI] [GO:0032433 "filopodium tip" evidence=IDA]
[GO:0005925 "focal adhesion" evidence=IEA;IDA] [GO:0030175
"filopodium" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0274109 GO:GO:0005938 GO:GO:0016477 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 GenomeReviews:CM000151_GR
GO:GO:0005925 EMBL:AAFI02000012 EMBL:AC123513 GO:GO:0032433
GO:GO:0043326 Gene3D:2.10.110.10 GO:GO:0007109 GO:GO:0016339
GO:GO:0031154 GO:GO:0031589 HSSP:O60711 eggNOG:NOG267887
EMBL:AJ002382 RefSeq:XP_644036.1 ProteinModelPortal:Q8MML5
PRIDE:Q8MML5 EnsemblProtists:DDB0185208 GeneID:8619466
KEGG:ddi:DDB_G0274109 KO:K05760 OMA:GECINAL ProtClustDB:CLSZ2731594
Uniprot:Q8MML5
Length = 569
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 36/129 (27%), Positives = 54/129 (41%)
Query: 132 PRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFK 191
P S CGGC I +G + MG ++HP F C +C P+ + P+ + C++
Sbjct: 330 PTSRGTCGGCRKPI-FGETIQAMGKFYHPEHFCCHNCQNPLGTKNYYEQESLPHCEKCYQ 388
Query: 192 ELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYY 251
EL +C C + P I RC +K+ H H C C L+ + +
Sbjct: 389 ELFCARCAHCDE--P------ISDRCITALGKKW-----HVHHFVCTQC--LKPFEGGNF 433
Query: 252 SLEDGRSLC 260
DGR C
Sbjct: 434 FERDGRPYC 442
>UNIPROTKB|Q3ZBI6 [details] [associations]
symbol:FHL3 "Four and a half LIM domains protein 3"
species:9913 "Bos taurus" [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0030018 GO:GO:0046872 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 EMBL:BC103276 IPI:IPI00700515
RefSeq:NP_001029395.1 UniGene:Bt.52916 HSSP:Q13643
ProteinModelPortal:Q3ZBI6 SMR:Q3ZBI6 Ensembl:ENSBTAT00000009604
GeneID:504795 KEGG:bta:504795 CTD:2275 InParanoid:Q3ZBI6
OMA:QFTSRDD OrthoDB:EOG46144B NextBio:20866834 Uniprot:Q3ZBI6
Length = 280
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 43/153 (28%), Positives = 60/153 (39%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 140 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQ 198
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHE-HDHT 234
+F+ DPY +CF EL PKC C + P G G KY + H H
Sbjct: 199 QFTSREDDPYCVTCFGELFAPKCSSCKR--PITGLG----------GGKYVSFEDRHWHH 246
Query: 235 SRCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
S C SC R + + DG + LC C ++
Sbjct: 247 S-CFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 278
>UNIPROTKB|F1NC68 [details] [associations]
symbol:Gga.10869 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030016 "myofibril" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0005634
GO:GO:0007010 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 GO:GO:0045111 GO:GO:0030016
OMA:FRHHYIP EMBL:AADN02015021 EMBL:AADN02015019 EMBL:AADN02015020
IPI:IPI00591829 Ensembl:ENSGALT00000025088 Uniprot:F1NC68
Length = 609
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 121 SFPPYDPSHYYP-RSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSL 179
S PP + +P ++ + CGGC +I G L + ++H CF+C +CG + S
Sbjct: 131 SLPPSSSTGSFPVQNLRNCGGCGSEIKNGQSLVALDKHWHLGCFKCNTCGKLLNAEYISK 190
Query: 180 SGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQ 223
G PY ++ + +C+ C +YI E HP A+
Sbjct: 191 DGI-PYCETDYHAKFGIRCDNCEKYITGRVLEAGEKHYHPTCAR 233
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 38/141 (26%), Positives = 55/141 (39%)
Query: 127 PSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYH 186
P + +C GC+ I L + ++H C +C C P+ E FS G+ Y
Sbjct: 5 PQELGGKEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFS-RGESLYC 63
Query: 187 KSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESW 246
K F + KC C IP + R F Y H H C C+R +
Sbjct: 64 KDDFFKRFGTKCAACQLGIPPTQ---VVRRAQDF---VY-----HLHCFACVVCKRQLAT 112
Query: 247 NTRYYSLEDGRSLCLECMESA 267
+Y +ED R +C E+A
Sbjct: 113 GDEFYLMEDSRLVCKADYETA 133
>UNIPROTKB|Q179D0 [details] [associations]
symbol:AAEL005667 "AAEL005667-PA" species:7159 "Aedes
aegypti" [GO:0001952 "regulation of cell-matrix adhesion"
evidence=ISS] [GO:0015629 "actin cytoskeleton" evidence=ISS]
[GO:0051371 "muscle alpha-actinin binding" evidence=ISS]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0001952 eggNOG:NOG286537
InterPro:IPR006643 SMART:SM00735 GO:GO:0051371 OrthoDB:EOG4VDNDB
EMBL:CH477354 RefSeq:XP_001651243.1 UniGene:Aae.18579
ProteinModelPortal:Q179D0 EnsemblMetazoa:AAEL005667-RA
GeneID:5566824 KEGG:aag:AaeL_AAEL005667 VectorBase:AAEL005667
OMA:MPECPPP Uniprot:Q179D0
Length = 1172
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 38/125 (30%), Positives = 53/125 (42%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
VC CN + G+ L +G FHP CF+C CG F L DPY ++ + EL
Sbjct: 1058 VCSKCNTRVK-GDCLNAIGKQFHPECFKCAYCGKLFGNSPFFLEEGDPYCEADWNELFTT 1116
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCER-LESWNTRYYSLED 255
KC C P AG W + ++ H C SC++ LE + + +
Sbjct: 1117 KCFACG--FPVE-AG-------DKWVEALNNNY-HSQCFNCTSCKKNLEGQS---FFAKG 1162
Query: 256 GRSLC 260
GR C
Sbjct: 1163 GRPFC 1167
>UNIPROTKB|Q13643 [details] [associations]
symbol:FHL3 "Four and a half LIM domains protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=TAS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0030018
GO:GO:0046872 EMBL:CH471059 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 HOGENOM:HOG000231075 CTD:2275 OMA:QFTSRDD
OrthoDB:EOG46144B EMBL:U60116 EMBL:AK290641 EMBL:BT007052
EMBL:CR457425 EMBL:AL603790 EMBL:BC001351 EMBL:BC011697
IPI:IPI00014399 PIR:T09504 RefSeq:NP_001230807.1 RefSeq:NP_004459.2
UniGene:Hs.57687 PDB:1WYH PDB:2CUQ PDB:2EHE PDBsum:1WYH PDBsum:2CUQ
PDBsum:2EHE ProteinModelPortal:Q13643 SMR:Q13643 IntAct:Q13643
MINT:MINT-155453 STRING:Q13643 PhosphoSite:Q13643 DMDM:209572768
PaxDb:Q13643 PRIDE:Q13643 DNASU:2275 Ensembl:ENST00000373016
GeneID:2275 KEGG:hsa:2275 UCSC:uc001cck.3 GeneCards:GC01M038462
HGNC:HGNC:3704 HPA:HPA045723 MIM:602790 neXtProt:NX_Q13643
PharmGKB:PA28142 InParanoid:Q13643 PhylomeDB:Q13643 ChiTaRS:FHL3
EvolutionaryTrace:Q13643 GenomeRNAi:2275 NextBio:9257
ArrayExpress:Q13643 Bgee:Q13643 CleanEx:HS_FHL3
Genevestigator:Q13643 GermOnline:ENSG00000183386 Uniprot:Q13643
Length = 280
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 40/152 (26%), Positives = 58/152 (38%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 140 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQ 198
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTS 235
+F+ +DPY +CF EL PKC C + I G G KY +
Sbjct: 199 QFTSRDEDPYCVACFGELFAPKCSSCKRPIVGLGGG------------KYVSFEDRHWHH 246
Query: 236 RCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
C SC R + + DG + LC C ++
Sbjct: 247 NCFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 278
>UNIPROTKB|B0WXP3 [details] [associations]
symbol:CpipJ_CPIJ012054 "LIM domain-binding protein"
species:7176 "Culex quinquefasciatus" [GO:0001952 "regulation of
cell-matrix adhesion" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] [GO:0051371 "muscle alpha-actinin
binding" evidence=ISS] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0001952
eggNOG:NOG286537 InterPro:IPR006643 SMART:SM00735 GO:GO:0051371
OrthoDB:EOG4VDNDB EMBL:DS232170 RefSeq:XP_001862167.1
ProteinModelPortal:B0WXP3 EnsemblMetazoa:CPIJ012054-RA
GeneID:6044694 KEGG:cqu:CpipJ_CPIJ012054 VectorBase:CPIJ012054
HOGENOM:HOG000046926 OMA:ENELHQY PhylomeDB:B0WXP3 Uniprot:B0WXP3
Length = 2543
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 38/125 (30%), Positives = 53/125 (42%)
Query: 137 VCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
VC CN + G+ L +G FHP CF+C CG F L DPY ++ + EL
Sbjct: 2429 VCSKCNARVK-GDCLNAIGKQFHPECFKCTYCGKQFGNSPFFLEEGDPYCETDWNELFTT 2487
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCER-LESWNTRYYSLED 255
KC C P AG W + ++ H C SC++ LE + + +
Sbjct: 2488 KCFACG--FPVE-AG-------DKWVEALNNNY-HSQCFNCTSCKKNLEGQS---FFAKG 2533
Query: 256 GRSLC 260
GR C
Sbjct: 2534 GRPFC 2538
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 36/130 (27%), Positives = 53/130 (40%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GCN I L + ++H +C +C C + + FS +G Y K F + K
Sbjct: 9 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGS-VYCKEDFFKRFGTK 67
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F C + C C R + +Y +EDGR
Sbjct: 68 CTACQQGIPPTQ---VVRKAQDFVYHLPCFA--------CIICNRQLATGDEFYLMEDGR 116
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 117 LVCKEDYETA 126
>UNIPROTKB|E2QXW5 [details] [associations]
symbol:FHL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 OMA:QFTSRDD EMBL:AAEX03009589
EMBL:AAEX03009588 Ensembl:ENSCAFT00000005165 Uniprot:E2QXW5
Length = 290
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 121 SFPPYDPSHY----YPRSYKV-CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEH 175
SF P +HY Y + C C+ + G + +H C C C P+
Sbjct: 150 SFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQ 208
Query: 176 EFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHE-HDHT 234
+F+ DPY +CF EL PKC C + P G G KY + H H
Sbjct: 209 QFTSRDDDPYCVACFGELFAPKCSSCKR--PITGLG----------GGKYVSFEDRHWHH 256
Query: 235 SRCCSCERLESWNTRYYSLEDG-RSLCLECMES 266
S C SC R + + DG + +C C ++
Sbjct: 257 S-CFSCARCSTSLVGQGFVPDGDQVVCQGCSQA 288
>UNIPROTKB|Q1LZ94 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9913 "Bos taurus"
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC116134 IPI:IPI00688250
RefSeq:NP_001069820.1 UniGene:Bt.17081 ProteinModelPortal:Q1LZ94
SMR:Q1LZ94 STRING:Q1LZ94 PRIDE:Q1LZ94 Ensembl:ENSBTAT00000009126
GeneID:614876 KEGG:bta:614876 CTD:4005 eggNOG:NOG319108
InParanoid:Q1LZ94 KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG
NextBio:20899332 Uniprot:Q1LZ94
Length = 158
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 ALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYP 171
A++ L+PS P D P S CGGC +IG +L + Y+H +C C CG
Sbjct: 4 AIERKSLDPSEEPVDEVLQMPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCR 63
Query: 172 ITE 174
+ E
Sbjct: 64 LGE 66
>UNIPROTKB|P25791 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0097067 "cellular response to
thyroid hormone stimulus" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070888 "E-box binding" evidence=IDA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0043425 "bHLH transcription factor
binding" evidence=IPI] [GO:0048037 "cofactor binding" evidence=IPI]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007275 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0035162 GO:GO:0097067 GO:GO:0045647
GO:GO:0001228 PDB:2XJY PDB:2XJZ PDBsum:2XJY PDBsum:2XJZ
HOGENOM:HOG000232175 HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108
KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG EMBL:X61118 EMBL:BC034041
EMBL:BC035607 EMBL:BC042426 EMBL:BC073973 EMBL:AF257211
IPI:IPI00016852 IPI:IPI00915342 IPI:IPI00926017 PIR:S29477
RefSeq:NP_001135787.1 RefSeq:NP_001135788.1 RefSeq:NP_005565.2
UniGene:Hs.34560 ProteinModelPortal:P25791 SMR:P25791 IntAct:P25791
MINT:MINT-233526 STRING:P25791 PhosphoSite:P25791 DMDM:132533
PRIDE:P25791 DNASU:4005 Ensembl:ENST00000257818
Ensembl:ENST00000395833 Ensembl:ENST00000411482 GeneID:4005
KEGG:hsa:4005 UCSC:uc001mvc.3 UCSC:uc010rem.2 GeneCards:GC11M033880
H-InvDB:HIX0009544 HGNC:HGNC:6642 HPA:CAB016258 MIM:180385
neXtProt:NX_P25791 PharmGKB:PA30408 InParanoid:P25791
PhylomeDB:P25791 ChiTaRS:LMO2 EvolutionaryTrace:P25791
GenomeRNAi:4005 NextBio:15712 Bgee:P25791 CleanEx:HS_LMO2
Genevestigator:P25791 GermOnline:ENSG00000135363 Uniprot:P25791
Length = 158
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 ALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYP 171
A++ L+PS P D P S CGGC +IG +L + Y+H +C C CG
Sbjct: 4 AIERKSLDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCR 63
Query: 172 ITE 174
+ E
Sbjct: 64 LGE 66
>UNIPROTKB|F1SGS5 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 OMA:CEKRIRA EMBL:CU463884
ProteinModelPortal:F1SGS5 SMR:F1SGS5 Ensembl:ENSSSCT00000014533
Uniprot:F1SGS5
Length = 158
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 ALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYP 171
A++ L+PS P D P S CGGC +IG +L + Y+H +C C CG
Sbjct: 4 AIERKSLDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCR 63
Query: 172 ITE 174
+ E
Sbjct: 64 LGE 66
>MGI|MGI:102811 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10090 "Mus musculus"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IGI] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:102811 GO:GO:0005634
GO:GO:0043234 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 Gene3D:2.10.110.10 GO:GO:0035162 GO:GO:0045647
PDB:2L6Y PDB:2L6Z PDBsum:2L6Y PDBsum:2L6Z PDB:1J2O PDB:2LXD
PDBsum:1J2O PDBsum:2LXD HOGENOM:HOG000232175 HOVERGEN:HBG054231
CTD:4005 eggNOG:NOG319108 KO:K15612 OrthoDB:EOG4001KG ChiTaRS:LMO2
EMBL:M64360 EMBL:BC057880 IPI:IPI00114239 PIR:A39370
RefSeq:NP_001135808.1 RefSeq:NP_001135809.1 RefSeq:NP_032531.2
UniGene:Mm.29266 ProteinModelPortal:P25801 SMR:P25801
DIP:DIP-24247N IntAct:P25801 MINT:MINT-2567948 STRING:P25801
PhosphoSite:P25801 PRIDE:P25801 Ensembl:ENSMUST00000123437
Ensembl:ENSMUST00000163256 Ensembl:ENSMUST00000170926 GeneID:16909
KEGG:mmu:16909 InParanoid:P25801 EvolutionaryTrace:P25801
NextBio:290948 Bgee:P25801 CleanEx:MM_LMO2 Genevestigator:P25801
GermOnline:ENSMUSG00000032698 Uniprot:P25801
Length = 158
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 ALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYP 171
A++ L+PS P D P S CGGC +IG +L + Y+H +C C CG
Sbjct: 4 AIERKSLDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCR 63
Query: 172 ITE 174
+ E
Sbjct: 64 LGE 66
>RGD|1307101 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=ISO] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0035162 "embryonic hemopoiesis" evidence=ISO] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307101 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190 GO:GO:0000977
GO:GO:0042789 GO:GO:0070888 GO:GO:0035162 EMBL:CH473949
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108 KO:K15612 OMA:CEKRIRA
OrthoDB:EOG4001KG IPI:IPI00373656 RefSeq:NP_001032435.2
UniGene:Rn.155591 GeneID:362176 KEGG:rno:362176 NextBio:678912
EMBL:BC105772 RefSeq:NP_001231708.1 RefSeq:NP_001231709.1
RefSeq:NP_001231710.1 SMR:Q3KRD2 STRING:Q3KRD2 UCSC:RGD:1307101
InParanoid:Q3KRD2 Genevestigator:Q3KRD2 Uniprot:Q3KRD2
Length = 158
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 ALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYP 171
A++ L+PS P D P S CGGC +IG +L + Y+H +C C CG
Sbjct: 4 AIERKSLDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCR 63
Query: 172 ITE 174
+ E
Sbjct: 64 LGE 66
>UNIPROTKB|E2QUL4 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050859 "negative regulation of B cell
receptor signaling pathway" evidence=IEA] [GO:0033628 "regulation
of cell adhesion mediated by integrin" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0002102 "podosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007162 GO:GO:0002102
GO:GO:0003712 GO:GO:0033628 CTD:9404 OMA:GFHEKDK GO:GO:0050859
InterPro:IPR017305 PIRSF:PIRSF037881 EMBL:AAEX03011425
RefSeq:XP_540583.2 Ensembl:ENSCAFT00000012313 GeneID:483465
KEGG:cfa:483465 NextBio:20857851 Uniprot:E2QUL4
Length = 386
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 39/141 (27%), Positives = 53/141 (37%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEF-SLSGK 182
PY + CGGCN + NYL M T +HP CF C C + F L G+
Sbjct: 256 PYCRKDFLAMFSPKCGGCNRPV-LENYLSAMDTVWHPECFVCGDCFSSFSSGSFFELDGR 314
Query: 183 DPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCER 242
PY + + + C C Q P G RC K+ P H C C
Sbjct: 315 -PYCELHYHQRRGTLCHGCGQ--PITG------RCISAMGHKFHPEH-----FVCAFC-- 358
Query: 243 LESWNTRYYSLEDGRSLCLEC 263
L + + +D ++ C C
Sbjct: 359 LTQLSKGIFREQDDKTYCQPC 379
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/130 (28%), Positives = 54/130 (41%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC+ I L + ++H C +C C + + FS +G + Y K F + K
Sbjct: 33 CAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAG-NVYCKEDFFKRFGTK 91
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
C C Q IP + + F Y H H C C R + +Y +EDGR
Sbjct: 92 CASCQQGIPPTQ---VVRKAQDF---VY-----HLHCFACVMCSRQLATGDEFYLMEDGR 140
Query: 258 SLCLECMESA 267
+C E E+A
Sbjct: 141 LVCKEDYETA 150
>UNIPROTKB|F1NB68 [details] [associations]
symbol:PXN "Paxillin" species:9031 "Gallus gallus"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0017166 "vinculin binding" evidence=IEA]
[GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0034614 "cellular
response to reactive oxygen species" evidence=IEA] [GO:0048041
"focal adhesion assembly" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0051435 "BH4
domain binding" evidence=IEA] [GO:0060396 "growth hormone receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR001904 PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005886 GO:GO:0007010 GO:GO:0005856
GO:GO:0046872 GO:GO:0018108 GO:GO:0008270 GO:GO:0000187
GO:GO:0006928 GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0048041 GO:GO:0007229
GO:GO:0034614 GO:GO:0030032 GO:GO:0060396 IPI:IPI00585869
OMA:GFMAQGK EMBL:AADN02043198 Ensembl:ENSGALT00000011727
Uniprot:F1NB68
Length = 559
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 37/139 (26%), Positives = 51/139 (36%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 431 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFINGSFFEHDGQP 489
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC +K+ P H C C L+
Sbjct: 490 YCEVHYHERRGSLCSGCQK--PITG------RCITAMGKKFHPEH-----FVCAFC--LK 534
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 535 QLNKGTFKEQNDKPYCQNC 553
>UNIPROTKB|P49024 [details] [associations]
symbol:PXN "Paxillin" species:9031 "Gallus gallus"
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0007160 PDB:2L6F PDB:2L6G PDB:2L6H
PDBsum:2L6F PDBsum:2L6G PDBsum:2L6H eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OrthoDB:EOG4TMR25 KO:K05760
EMBL:U14589 EMBL:L30099 IPI:IPI00585869 PIR:B55933
RefSeq:NP_990315.1 UniGene:Gga.4056 ProteinModelPortal:P49024
SMR:P49024 IntAct:P49024 STRING:P49024 GeneID:395832
KEGG:gga:395832 CTD:5829 InParanoid:P49024 NextBio:20815900
Uniprot:P49024
Length = 559
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 37/139 (26%), Positives = 51/139 (36%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + T +HP CF CR C P F P
Sbjct: 431 YCRKDYFDMFAPKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFINGSFFEHDGQP 489
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y + + E C C + P G RC +K+ P H C C L+
Sbjct: 490 YCEVHYHERRGSLCSGCQK--PITG------RCITAMGKKFHPEH-----FVCAFC--LK 534
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 535 QLNKGTFKEQNDKPYCQNC 553
>ZFIN|ZDB-GENE-031219-1 [details] [associations]
symbol:fhl1b "four and a half LIM domains 1b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-031219-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q05158 HOVERGEN:HBG074526 KO:K14365
EMBL:BC053279 IPI:IPI00481621 RefSeq:NP_954687.1 UniGene:Dr.84449
ProteinModelPortal:Q7T327 SMR:Q7T327 GeneID:387528 KEGG:dre:387528
CTD:387528 InParanoid:Q7T327 NextBio:20814152 ArrayExpress:Q7T327
Uniprot:Q7T327
Length = 280
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 37/140 (26%), Positives = 56/140 (40%)
Query: 138 CGGCNCDIGYGNY-LGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHP 196
C GC I G + G +H CF+C C PI F + Y C ++
Sbjct: 101 CHGCYKPILPGTENVEYKGNSWHDECFKCYQCQKPIGNKSFITKNNNVYCSPCHEKKFAK 160
Query: 197 KCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDG 256
+C C + I T G + Y+ P W H C SC + + TR+ S E+
Sbjct: 161 QCACCKKPITTGG---VNYQDQP-W---------HSECFVCSSCRKPLA-GTRFTSHEE- 205
Query: 257 RSLCLECMESAIMDT-GDCQ 275
+ C++C +S + CQ
Sbjct: 206 KVYCVDCYKSTVAKKCSGCQ 225
>ZFIN|ZDB-GENE-040105-1 [details] [associations]
symbol:pxn "paxillin" species:7955 "Danio rerio"
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
[GO:0001756 "somitogenesis" evidence=IEP] [GO:0009790 "embryo
development" evidence=IEP] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-040105-1 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0001756 Gene3D:2.10.110.10 GO:GO:0007160 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 KO:K05760
CTD:5829 EMBL:AY515510 IPI:IPI00499179 RefSeq:NP_963882.1
UniGene:Dr.107449 UniGene:Dr.81472 ProteinModelPortal:Q6R3L1
SMR:Q6R3L1 STRING:Q6R3L1 PRIDE:Q6R3L1 GeneID:399546 KEGG:dre:399546
NextBio:20816604 ArrayExpress:Q6R3L1 Bgee:Q6R3L1 Uniprot:Q6R3L1
Length = 533
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 36/139 (25%), Positives = 52/139 (37%)
Query: 125 YDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP 184
Y Y+ CGGC I NY+ + + +HP CF CR C P F P
Sbjct: 405 YCRKDYFDMFAPKCGGCARAI-LENYISALNSLWHPECFVCRECFTPFVNGSFFEHEGQP 463
Query: 185 YHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLE 244
Y ++ + E C C + P G RC +K+ P H C C L+
Sbjct: 464 YCEAHYHERRGSLCSGCQK--PITG------RCITAMGKKFHPEH-----FVCAFC--LK 508
Query: 245 SWNTRYYSLEDGRSLCLEC 263
N + ++ + C C
Sbjct: 509 QLNKGTFKEQNDKPYCQSC 527
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKD 183
PY +HY+ R +C GC I G + MG FHP F C C + + F
Sbjct: 463 PYCEAHYHERRGSLCSGCQKPIT-GRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDK 521
Query: 184 PYHKSCFKEL 193
PY +SCF +L
Sbjct: 522 PYCQSCFVKL 531
>WB|WBGene00006407 [details] [associations]
symbol:lim-9 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0071688 "striated
muscle myosin thick filament assembly" evidence=IMP] [GO:0031430 "M
band" evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR010442 Pfam:PF06297
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51303 SMART:SM00132
GO:GO:0031430 GO:GO:0046872 GO:GO:0008270 GO:GO:0071688
Gene3D:2.10.110.10 EMBL:Z81068 GeneTree:ENSGT00690000101670
EMBL:Z92780 UniGene:Cel.5046 GeneID:3565712 KEGG:cel:CELE_F25H5.1
CTD:3565712 NextBio:957561 EMBL:EF443133 RefSeq:NP_001021410.2
ProteinModelPortal:G5EF39 SMR:G5EF39 PRIDE:G5EF39
EnsemblMetazoa:F25H5.1f WormBase:F25H5.1f OMA:GACSRER
Uniprot:G5EF39
Length = 656
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 39/174 (22%), Positives = 67/174 (38%)
Query: 108 DYAWALQDSQLNPSFPPYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRS 167
D + ++D+Q+ Y HY C C+ I G Y M +H + F C
Sbjct: 327 DLTYCVKDNQI------YCERHYAELHKPRCSACDELIFAGEYTKAMNKDWHSDHFCCWQ 380
Query: 168 CGYPITEHEFSLSGKDPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWAQKYCP 227
C +T + + + PY C++++ +C+ C + I + L Y
Sbjct: 381 CDQTLTGQRYIMRDEQPYCIKCYEDVFANQCDECAKPIGIDSKDL-----------SYKD 429
Query: 228 SHEHDHTSRCCSCERLESWNTRYYSLEDGRSLCLECMESAIMDTGD-CQPLYHA 280
H H+H C C ++ + + S D R C C + A D C ++ A
Sbjct: 430 KHWHEHCFLCSMC-KISLVDMPFGSKND-RIFCSNCYDQAFATRCDGCNEIFRA 481
>UNIPROTKB|I3LNC5 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] [GO:0033628 "regulation of cell
adhesion mediated by integrin" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0002102 "podosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 EMBL:CU929527 Ensembl:ENSSSCT00000031344
Uniprot:I3LNC5
Length = 316
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPI-TEHEFSLSGK 182
PY + CGGCN + NYL M T +HP CF C C T F L G+
Sbjct: 186 PYCRKDFLAMFSPKCGGCNRPV-LENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGR 244
Query: 183 DPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
P+ + + + C C Q I + Y+ HP
Sbjct: 245 -PFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHP 280
>UNIPROTKB|E2R5M1 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:54751 OMA:NRLFCKP
EMBL:AAEX03001865 EMBL:AAEX03001866 RefSeq:XP_865087.1
Ensembl:ENSCAFT00000025606 GeneID:608618 KEGG:cfa:608618
Uniprot:E2R5M1
Length = 372
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 36/138 (26%), Positives = 56/138 (40%)
Query: 131 YPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP-YHKSC 189
Y + + CG C+ + + + +G FHP CF C +C I + F+L +D Y
Sbjct: 235 YQDTLEKCGKCD-KVVQEHIIRALGRAFHPTCFTCVTCARCIGDESFALDSQDEVYCLDD 293
Query: 190 FKELTHPKCEVCHQ-YIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERL---ES 245
F P C +C IP +G + C + + H++ RC C L E
Sbjct: 294 FYRKFAPVCSICENPIIPRDGKDAFKIEC---MGRNF-----HENCYRCEDCRILLSVEP 345
Query: 246 WNTRYYSLEDGRSLCLEC 263
+ Y L + R C C
Sbjct: 346 TDQGCYPLNN-RLFCKPC 362
>UNIPROTKB|F1N6Q2 [details] [associations]
symbol:F1N6Q2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132
SMART:SM00153 GO:GO:0005634 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 GO:GO:0045111
GO:GO:0030016 OMA:FRHHYIP EMBL:DAAA02018884 EMBL:DAAA02018885
EMBL:DAAA02018886 EMBL:DAAA02018887 EMBL:DAAA02018888
IPI:IPI00711459 Ensembl:ENSBTAT00000021189 Uniprot:F1N6Q2
Length = 616
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
CGGC +I G L + ++H CF+C++CG + S G PY ++ + +
Sbjct: 105 CGGCGAEIKNGQSLVALDKHWHLGCFKCKTCGKQLNAEYISKDGL-PYCEADYHTKFGIR 163
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWA 222
C+ C +YI + E HP A
Sbjct: 164 CDSCEKYITGHVLEAGEKHYHPLCA 188
>UNIPROTKB|F5GZL6 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01010741 ProteinModelPortal:F5GZL6
SMR:F5GZL6 PRIDE:F5GZL6 Ensembl:ENST00000546334 ArrayExpress:F5GZL6
Bgee:F5GZL6 Uniprot:F5GZL6
Length = 531
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S + + + CGGC +I G L + ++H CF+C+SCG + S G PY +
Sbjct: 143 SAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGL-PYCE 201
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
+ + +C+ C +YI E HP
Sbjct: 202 ADYHAKFGIRCDSCEKYITGRVLEAGEKHYHP 233
>WB|WBGene00012379 [details] [associations]
symbol:Y1A5A.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 eggNOG:NOG314122
GeneTree:ENSGT00690000101670 HSSP:P70662 EMBL:AL021177 PIR:T26544
RefSeq:NP_497801.1 ProteinModelPortal:Q9XXT7 SMR:Q9XXT7
STRING:Q9XXT7 EnsemblMetazoa:Y1A5A.1 GeneID:175515
KEGG:cel:CELE_Y1A5A.1 UCSC:Y1A5A.1 CTD:175515 WormBase:Y1A5A.1
HOGENOM:HOG000153885 InParanoid:Q9XXT7 OMA:KMDRSID NextBio:888484
Uniprot:Q9XXT7
Length = 192
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 136 KVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTH 195
++CG C+ IG L M +HP+ F C SC PI + F + Y CF + +
Sbjct: 65 RLCGHCHQSIG-SEALVAMNRLWHPDHFTCSSCKRPIKQ-TFQAADNHAYCVQCFAQKYN 122
Query: 196 PKCEVCHQYIPTNGAGLIEYRCHP 219
PKC C + + ++ HP
Sbjct: 123 PKCAGCMETLVDTCLLALDRHWHP 146
>UNIPROTKB|F5GYR0 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01011329 ProteinModelPortal:F5GYR0
SMR:F5GYR0 Ensembl:ENST00000545242 ArrayExpress:F5GYR0 Bgee:F5GYR0
Uniprot:F5GYR0
Length = 571
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S + + + CGGC +I G L + ++H CF+C+SCG + S G PY +
Sbjct: 143 SAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGL-PYCE 201
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
+ + +C+ C +YI E HP
Sbjct: 202 ADYHAKFGIRCDSCEKYITGRVLEAGEKHYHP 233
>UNIPROTKB|F8W6D8 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01013991 ProteinModelPortal:F8W6D8
SMR:F8W6D8 Ensembl:ENST00000296372 ArrayExpress:F8W6D8 Bgee:F8W6D8
Uniprot:F8W6D8
Length = 573
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S + + + CGGC +I G L + ++H CF+C+SCG + S G PY +
Sbjct: 143 SAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGL-PYCE 201
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
+ + +C+ C +YI E HP
Sbjct: 202 ADYHAKFGIRCDSCEKYITGRVLEAGEKHYHP 233
>UNIPROTKB|Q6H8Q1 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997
EMBL:DQ413177 EMBL:AJ748600 EMBL:AJ748601 EMBL:AK094754
EMBL:AK094798 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
EMBL:BC067214 EMBL:BC122567 EMBL:AB058711 EMBL:AL834195
IPI:IPI00167702 IPI:IPI00187164 IPI:IPI00434484 IPI:IPI00479275
IPI:IPI00761095 IPI:IPI00892702 IPI:IPI00902561 IPI:IPI00910569
RefSeq:NP_001123555.1 RefSeq:NP_001123556.1 RefSeq:NP_001123557.1
RefSeq:NP_001123558.1 RefSeq:NP_001123559.1 RefSeq:NP_001123560.1
RefSeq:NP_115808.3 UniGene:Hs.233404 PDB:1V6G PDB:1WIG PDB:2L3X
PDBsum:1V6G PDBsum:1WIG PDBsum:2L3X ProteinModelPortal:Q6H8Q1
SMR:Q6H8Q1 IntAct:Q6H8Q1 STRING:Q6H8Q1 PhosphoSite:Q6H8Q1
DMDM:56404514 PaxDb:Q6H8Q1 PRIDE:Q6H8Q1 Ensembl:ENST00000318888
Ensembl:ENST00000341937 Ensembl:ENST00000361581
Ensembl:ENST00000361737 Ensembl:ENST00000407564
Ensembl:ENST00000428004 Ensembl:ENST00000505872
Ensembl:ENST00000514025 GeneID:84448 KEGG:hsa:84448 UCSC:uc003gkl.3
UCSC:uc003gko.3 UCSC:uc003gkp.3 UCSC:uc003gkq.3 UCSC:uc003gks.3
CTD:84448 GeneCards:GC04M007967 HGNC:HGNC:19195 HPA:HPA035808
MIM:612544 neXtProt:NX_Q6H8Q1 PharmGKB:PA134940437
EvolutionaryTrace:Q6H8Q1 GenomeRNAi:84448 NextBio:74223
ArrayExpress:Q6H8Q1 Bgee:Q6H8Q1 CleanEx:HS_ABLIM2
Genevestigator:Q6H8Q1 GermOnline:ENSG00000163995 GO:GO:0045111
Uniprot:Q6H8Q1
Length = 611
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S + + + CGGC +I G L + ++H CF+C+SCG + S G PY +
Sbjct: 143 SAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGL-PYCE 201
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
+ + +C+ C +YI E HP
Sbjct: 202 ADYHAKFGIRCDSCEKYITGRVLEAGEKHYHP 233
>MGI|MGI:1921452 [details] [associations]
symbol:Fblim1 "filamin binding LIM protein 1" species:10090
"Mus musculus" [GO:0001725 "stress fiber" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0031005 "filamin
binding" evidence=ISO] [GO:0033623 "regulation of integrin
activation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:1921452 GO:GO:0043231
GO:GO:0005938 GO:GO:0008360 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 EMBL:CH466615 GO:GO:0031005 CTD:54751
eggNOG:NOG315774 HOGENOM:HOG000007533 HOVERGEN:HBG051561
OMA:NRLFCKP OrthoDB:EOG4PRSRD GO:GO:0033623 ChiTaRS:FBLIM1
EMBL:AF513359 EMBL:AK154680 EMBL:AK170151 EMBL:AK170440
EMBL:AL670446 EMBL:BC004777 IPI:IPI00114860 RefSeq:NP_001156728.1
RefSeq:NP_598515.3 UniGene:Mm.490327 ProteinModelPortal:Q71FD7
SMR:Q71FD7 STRING:Q71FD7 PhosphoSite:Q71FD7 PaxDb:Q71FD7
PRIDE:Q71FD7 Ensembl:ENSMUST00000006381 Ensembl:ENSMUST00000105784
Ensembl:ENSMUST00000105785 GeneID:74202 KEGG:mmu:74202
InParanoid:Q3TDK3 NextBio:340094 Bgee:Q71FD7 CleanEx:MM_FBLIM1
Genevestigator:Q71FD7 GermOnline:ENSMUSG00000006219 Uniprot:Q71FD7
Length = 375
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 35/138 (25%), Positives = 57/138 (41%)
Query: 131 YPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDP-YHKSC 189
Y + + CG C ++ + + +G FHP CF C +C I++ F+L ++ Y +
Sbjct: 238 YQDTLEKCGKCG-EVVQEHVIRALGKAFHPPCFTCVTCARCISDESFALDSQNQVYCVAD 296
Query: 190 FKELTHPKCEVCHQ-YIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERL---ES 245
F P C +C IP +G + C + + H++ RC C L E
Sbjct: 297 FYRKFAPVCSICENPIIPRDGKDAFKIEC---MGRNF-----HENCYRCEDCSVLLSVEP 348
Query: 246 WNTRYYSLEDGRSLCLEC 263
+ Y L D C C
Sbjct: 349 TDQGCYPLND-HLFCKPC 365
>UNIPROTKB|Q1JQB5 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9913
"Bos taurus" [GO:0001725 "stress fiber" evidence=ISS] [GO:0031005
"filamin binding" evidence=ISS] [GO:0033623 "regulation of integrin
activation" evidence=ISS] [GO:0016337 "cell-cell adhesion"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0043231 GO:GO:0005938
GO:GO:0008360 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 GO:GO:0031005 EMBL:BC116079
IPI:IPI00712901 RefSeq:NP_001070423.1 UniGene:Bt.2860
ProteinModelPortal:Q1JQB5 STRING:Q1JQB5 Ensembl:ENSBTAT00000024926
GeneID:767833 KEGG:bta:767833 CTD:54751 eggNOG:NOG315774
HOGENOM:HOG000007533 HOVERGEN:HBG051561 InParanoid:Q1JQB5
OMA:NRLFCKP OrthoDB:EOG4PRSRD NextBio:20918202 GO:GO:0033623
Uniprot:Q1JQB5
Length = 378
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 36/138 (26%), Positives = 57/138 (41%)
Query: 131 YPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSL-SGKDPYHKSC 189
Y + + CG C ++ + + +G FHP+CF C +C I + F+L S + Y
Sbjct: 241 YQDTLEKCGKCG-EVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDD 299
Query: 190 FKELTHPKCEVCHQ-YIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERL---ES 245
F P C +C IP +G + C + + H++ RC C L E
Sbjct: 300 FYRKFAPVCSICENPIIPRDGKDAFKIEC---MGRNF-----HENCYRCEDCRVLLSVEP 351
Query: 246 WNTRYYSLEDGRSLCLEC 263
+ Y L + R C C
Sbjct: 352 TDQGCYPLNN-RLFCKPC 368
>UNIPROTKB|E9PF39 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650
EMBL:AC114807 RefSeq:NP_001123555.1 UniGene:Hs.233404 GeneID:84448
KEGG:hsa:84448 CTD:84448 HGNC:HGNC:19195 GenomeRNAi:84448
NextBio:74223 GO:GO:0045111 GO:GO:0030016 IPI:IPI00761132
ProteinModelPortal:E9PF39 SMR:E9PF39 Ensembl:ENST00000447017
UCSC:uc003gkj.4 OMA:FRHHYIP ArrayExpress:E9PF39 Bgee:E9PF39
Uniprot:E9PF39
Length = 645
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S + + + CGGC +I G L + ++H CF+C+SCG + S G PY +
Sbjct: 143 SAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGL-PYCE 201
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
+ + +C+ C +YI E HP
Sbjct: 202 ADYHAKFGIRCDSCEKYITGRVLEAGEKHYHP 233
>ZFIN|ZDB-GENE-050327-91 [details] [associations]
symbol:ablim1b "actin binding LIM protein 1b"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128
Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089
SMART:SM00132 SMART:SM00153 ZFIN:ZDB-GENE-050327-91 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 EMBL:BX465198
EMBL:CU915376 IPI:IPI00994922 Ensembl:ENSDART00000126354
Bgee:F1QT49 Uniprot:F1QT49
Length = 786
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC DI G L + + +H CF+C++CG ++ S G PY + ++ +
Sbjct: 146 CAGCGRDIKNGQALLALDSQWHLGCFKCKACGKVLSGEYISKDGS-PYCEKDYQIHFGVQ 204
Query: 198 CEVCHQYI 205
CE CHQ+I
Sbjct: 205 CEACHQFI 212
>WB|WBGene00016197 [details] [associations]
symbol:pxl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0055120 "striated muscle dense
body" evidence=IDA] [GO:0031430 "M band" evidence=IDA] [GO:0005912
"adherens junction" evidence=IDA] [GO:0043050 "pharyngeal pumping"
evidence=IMP] [GO:0002102 "podosome" evidence=IDA] [GO:0061061
"muscle structure development" evidence=IMP] [GO:0017166 "vinculin
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 34/126 (26%), Positives = 50/126 (39%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC+ I N++ +GT++HP+CF C+ CG F P C + +
Sbjct: 294 CNGCSQPIT-SNFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPL---CERHYHESR 349
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
+C Q G I RC +K+ P H RC C + T + D R
Sbjct: 350 GSICSQC-----RGAINGRCVAAMGRKFHPEH-----FRCSYCNHQLTKGT--FKEVDRR 397
Query: 258 SLCLEC 263
C +C
Sbjct: 398 PFCHKC 403
>UNIPROTKB|Q09476 [details] [associations]
symbol:pxl-1 "Paxillin homolog 1" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 34/126 (26%), Positives = 50/126 (39%)
Query: 138 CGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHKSCFKELTHPK 197
C GC+ I N++ +GT++HP+CF C+ CG F P C + +
Sbjct: 294 CNGCSQPIT-SNFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPL---CERHYHESR 349
Query: 198 CEVCHQYIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGR 257
+C Q G I RC +K+ P H RC C + T + D R
Sbjct: 350 GSICSQC-----RGAINGRCVAAMGRKFHPEH-----FRCSYCNHQLTKGT--FKEVDRR 397
Query: 258 SLCLEC 263
C +C
Sbjct: 398 PFCHKC 403
>UNIPROTKB|Q5REN1 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9601
"Pongo abelii" [GO:0001725 "stress fiber" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0031005 "filamin binding"
evidence=ISS] [GO:0033623 "regulation of integrin activation"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005938 GO:GO:0008360
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GO:GO:0001725 GO:GO:0016337 GO:GO:0031005 CTD:54751
HOVERGEN:HBG051561 GO:GO:0033623 EMBL:CR857491
RefSeq:NP_001127194.1 UniGene:Pab.10207 ProteinModelPortal:Q5REN1
GeneID:100174248 KEGG:pon:100174248 InParanoid:Q5REN1
Uniprot:Q5REN1
Length = 375
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 36/138 (26%), Positives = 57/138 (41%)
Query: 131 YPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSL-SGKDPYHKSC 189
Y + + CG C ++ + + +G FHP+CF C +C I + F+L S + Y
Sbjct: 238 YQDTLERCGKCG-EVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDD 296
Query: 190 FKELTHPKCEVCHQ-YIPTNGAGLIEYRCHPFWAQKYCPSHEHDHTSRCCSCERL---ES 245
F P C +C IP +G + C + + H++ RC C L E
Sbjct: 297 FYRKFAPVCSICENPIIPRDGKDAFKIEC---MGRSF-----HENCYRCEDCRILLSVEP 348
Query: 246 WNTRYYSLEDGRSLCLEC 263
+ Y L + R C C
Sbjct: 349 TDQGCYPLNN-RLFCKPC 365
>UNIPROTKB|F1PCZ6 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 OMA:FRHHYIP
EMBL:AAEX03002409 EMBL:AAEX03002410 EMBL:AAEX03002411
Ensembl:ENSCAFT00000023075 Uniprot:F1PCZ6
Length = 643
Score = 119 (46.9 bits), Expect = 0.00072, P = 0.00072
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 128 SHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPITEHEFSLSGKDPYHK 187
S Y + CGGC +I G L + ++H CF+C +CG + S G PY +
Sbjct: 141 SAYLSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAEYISKDGL-PYCE 199
Query: 188 SCFKELTHPKCEVCHQYIPTNGAGLIEYRCHPFWA 222
+ + +C+ C +YI + E HP A
Sbjct: 200 ADYHTKFGIRCDGCEKYITGHVLEAGEKHYHPLCA 234
>UNIPROTKB|B7Z5P7 [details] [associations]
symbol:LPXN "cDNA FLJ51550, highly similar to Leupaxin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AP001350 EMBL:AP003557 UniGene:Hs.125474
HGNC:HGNC:14061 HOVERGEN:HBG001512 EMBL:AK299264 IPI:IPI00922187
SMR:B7Z5P7 STRING:B7Z5P7 Ensembl:ENST00000528489 UCSC:uc010rkk.2
Uniprot:B7Z5P7
Length = 366
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 30/97 (30%), Positives = 39/97 (40%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPI-TEHEFSLSGK 182
PY + CGGCN + NYL M T +HP CF C C T F L G+
Sbjct: 236 PYCRKDFLAMFSPKCGGCNRPV-LENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGR 294
Query: 183 DPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
P+ + + C C Q I + Y+ HP
Sbjct: 295 -PFCELHYHHRRGTLCHGCGQPITGRCISAMGYKFHP 330
>UNIPROTKB|O60711 [details] [associations]
symbol:LPXN "Leupaxin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0033628 "regulation of cell adhesion
mediated by integrin" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0002102 "podosome" evidence=IDA]
[GO:0050859 "negative regulation of B cell receptor signaling
pathway" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005925 "focal adhesion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003712 "transcription
cofactor activity" evidence=IDA] [GO:0007162 "negative regulation
of cell adhesion" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007165 GO:GO:0006461
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 EMBL:CH471076
GO:GO:0007155 GO:GO:0006351 GO:GO:0005925 Gene3D:2.10.110.10
GO:GO:0042995 GO:GO:0007162 GO:GO:0002102 GO:GO:0003712
GO:GO:0033628 EMBL:AF062075 EMBL:AK300955 EMBL:AK313306
EMBL:CR536531 EMBL:AK223165 EMBL:AP001350 EMBL:AP003557
EMBL:BC019035 IPI:IPI00299066 IPI:IPI00871430 RefSeq:NP_001137467.1
RefSeq:NP_004802.1 UniGene:Hs.125474 PDB:1X3H PDBsum:1X3H
ProteinModelPortal:O60711 SMR:O60711 IntAct:O60711
MINT:MINT-1449182 STRING:O60711 PhosphoSite:O60711 PaxDb:O60711
PeptideAtlas:O60711 PRIDE:O60711 DNASU:9404 Ensembl:ENST00000395074
Ensembl:ENST00000528954 GeneID:9404 KEGG:hsa:9404 UCSC:uc001nmw.3
CTD:9404 GeneCards:GC11M058294 HGNC:HGNC:14061 MIM:605390
neXtProt:NX_O60711 PharmGKB:PA30441 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 InParanoid:O60711
OMA:GFHEKDK OrthoDB:EOG4TMR25 PhylomeDB:O60711
EvolutionaryTrace:O60711 GenomeRNAi:9404 NextBio:35232
ArrayExpress:O60711 Bgee:O60711 CleanEx:HS_LPXN
Genevestigator:O60711 GermOnline:ENSG00000110031 GO:GO:0050859
InterPro:IPR017305 PIRSF:PIRSF037881 Uniprot:O60711
Length = 386
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 30/97 (30%), Positives = 39/97 (40%)
Query: 124 PYDPSHYYPRSYKVCGGCNCDIGYGNYLGCMGTYFHPNCFRCRSCGYPI-TEHEFSLSGK 182
PY + CGGCN + NYL M T +HP CF C C T F L G+
Sbjct: 256 PYCRKDFLAMFSPKCGGCNRPV-LENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGR 314
Query: 183 DPYHKSCFKELTHPKCEVCHQYIPTNGAGLIEYRCHP 219
P+ + + C C Q I + Y+ HP
Sbjct: 315 -PFCELHYHHRRGTLCHGCGQPITGRCISAMGYKFHP 350
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.456 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 499 438 0.00088 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 624 (66 KB)
Total size of DFA: 345 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.68u 0.12s 35.80t Elapsed: 00:00:01
Total cpu time: 35.69u 0.12s 35.81t Elapsed: 00:00:01
Start: Mon May 20 21:15:41 2013 End: Mon May 20 21:15:42 2013